RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EMG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000126749

Ensembl transcript IDs: ENST00000261406.7, ENST00000539196.2, ENST00000599672.6, ENST00000607161.5, ENST00000611981.1, ENST00000620255.1

Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCACTGGCACCATTGCCTCATTCAACATCAACACCAACGCCTGGGTaGCCCGGTGAGCTGCTGGTGGGGAGCCTGGACCCTGGTTCCTTC +
Preference number: 1 (lower is better)
Translates to: SLAPLPHSTSTPTPG*PGELLVGSLDPGSF
Trigger: GAAGGAACCAGGGTCCAGGCTCCCCACCAGCAGCTCACCGGGCCACCCAGGCGTTGGTGTTGATGTTGAATGAGGCAATGGTGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR TCA 90 bp ACCATTGCCTCATTCAACATCAACACCAACGCCTGGGTGGCCCGGTaGGCTGCTGGTGGGGAGCCTGGACCCTGGTTCCTTCCTTCCACT +
Preference number: 1 (lower is better)
Translates to: TIASFNINTNAWVAR*AAGGEPGPWFLPST
Trigger: AGTGGAAGGAAGGAACCAGGGTCCAGGCTCCCCACCAGCAGCTCACCGGGCCACCCAGGCGTTGGTGTTGATGTTGAATGAGGCAATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR GCA 90 bp TGCCTCATTCAACATCAACACCAACGCCTGGGTGGCCCGGTGAGCTaGTGGTGGGGAGCCTGGACCCTGGTTCCTTCCTTCCACTGTCTT +
Preference number: 1 (lower is better)
Translates to: CLIQHQHQRLGGPVS*WWGAWTLVPSFHCL
Trigger: AAGACAGTGGAAGGAAGGAACCAGGGTCCAGGCTCCCCACCAGCAGCTCACCGGGCCACCCAGGCGTTGGTGTTGATGTTGAATGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 90 bp GAAAAGGGCAAGGCAAAGTGGGATGCCTGTGCCAACATGAAGGTGTaGCTCTTTGAAACAAACCCCCGCTTCACTGGCACCATTGCCTCA +
Preference number: 1 (lower is better)
Translates to: EKGKAKWDACANMKV*LFETNPRFTGTIAS
Trigger: TGAGGCAATGGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCCACACCTTCATGTTGGCACAGGCATCCCACTTTGCCTTGCCCTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR TCA 90 bp GCTTTGAAGAAAAGGGCAAGGCAAAGTGGGATGCCTGTGCCAACATaGAGGTGTGGCTCTTTGAAACAAACCCCCGCTTCACTGGCACCA +
Preference number: 1 (lower is better)
Translates to: ALKKRARQSGMPVPT*RCGSLKQTPASLAP
Trigger: TGGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCCACACCTTCATGTTGGCACAGGCATCCCACTTTGCCTTGCCCTTTTCTTCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR TCA 90 bp CAAGGCAAAGTGGGATGCCTGTGCCAACATGAAGGTGTGGCTCTTTaGAACAAACCCCCGCTTCACTGGCACCATTGCCTCATTCAACAT +
Preference number: 1 (lower is better)
Translates to: QGKVGCLCQHEGVAL*NKPPLHWHHCLIQH
Trigger: ATGTTGAATGAGGCAATGGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCCACACCTTCATGTTGGCACAGGCATCCCACTTTGCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR TCA 90 bp CTTCCCTCAAGAACCACCCCTTCTGGTTCCGCTGCATGTACATGCTaGTCTGGGGCAAGTTTGTGCTGTACAAATATGTCACCTGTTGGC +
Preference number: 1 (lower is better)
Translates to: LPSRTTPSGSAACTC*SGASLCCTNMSPVG
Trigger: GCCAACAGGTGACATATTTGTACAGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGGTTCTTGAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 90 bp ACGGGCCTGGGCTTCAATGGCTTTGAAGAAAAGGGCAAGGCAAAGTaGGATGCCTGTGCCAACATGAAGGTGTGGCTCTTTGAAACAAAC +
Preference number: 1 (lower is better)
Translates to: TGLGFNGFEEKGKAK*DACANMKVWLFETN
Trigger: GTTTGTTTCAAAGAGCCACACCTTCATGTTGGCACAGGCATCCCACTTTGCCTTGCCCTTTTCTTCAAAGCCATTGAAGCCCAGGCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 90 bp CTCAAGAACCACCCCTTCTGGTTCCGCTGCATGTACATGCTGATCTaGGGCAAGTTTGTGCTGTACAAATATGTCACCTGTTGGCTGGTC +
Preference number: 1 (lower is better)
Translates to: LKNHPFWFRCMYMLI*GKFVLYKYVTCWLV
Trigger: GACCAGCCAACAGGTGACATATTTGTACAGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGGTTCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR TCA 90 bp TCAGGAAGGAGTATGCATTTTGACGGGCCTGGGCTTCAATGGCTTTaGAGAAAAGGGCAAGGCAAAGTGGGATGCCTGTGCCAACATGAA +
Preference number: 1 (lower is better)
Translates to: SGRSMHFDGPGLQWL*RKGQGKVGCLCQHE
Trigger: TTCATGTTGGCACAGGCATCCCACTTTGCCTTGCCCTTTTCTTCAAAGCCATTGAAGCCCAGGCCCGTCAAAATGCATACTCCTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR TCA 90 bp AGAGCCCTAACTGAGCTATTCCCTCTCAGGAAGGAGTATGCATTTTaGCGGGCCTGGGCTTCAATGGCTTTGAAGAAAAGGGCAAGGCAA +
Preference number: 1 (lower is better)
Translates to: RALTELFPLRKEYAF*RAWASMALKKRARQ
Trigger: TTGCCTTGCCCTTTTCTTCAAAGCCATTGAAGCCCAGGCCCGTCAAAATGCATACTCCTTCCTGAGAGGGAATAGCTCAGTTAGGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 90 bp CGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTaGAACTCAACAACGTCCCCTCCTGCAAAACGCACCTCAGAACGT +
Preference number: 1 (lower is better)
Translates to: RLLLMCLLVCNTSPV*NSTTSPPAKRTSER
Trigger: ACGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTTGAGTTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261406.7
3UTR TCA 90 bp GTTAAATACAGTGCTGCCCTTGAGGCTCTCCAAGGGAAAGGCGAATaGATATTCTCCAGGCCCTCTGCTTATTCCTCTCTGCCTATTGTG +
Preference number: 1 (lower is better)
Translates to: VKYSAALEALQGKGE*IFSRPSAYSSLPIV
Trigger: CACAATAGGCAGAGAGGAATAAGCAGAGGGCCTGGAGAATATTCATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR GCA 90 bp TGCACTGTGCTTTCTTCCCTCAAGAACCACCCCTTCTGGTTCCGCTaGATGTACATGCTGATCTGGGGCAAGTTTGTGCTGTACAAATAT +
Preference number: 1 (lower is better)
Translates to: CTVLSSLKNHPFWFR*MYMLIWGKFVLYKY
Trigger: ATATTTGTACAGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGGTTCTTGAGGGAAGAAAGCACAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR GCA 90 bp TCAGGGTTCTCTCCTTTAGCACATGGGAATCTGGGAGCTAAAGCCTaGCTTCAAAGCATGGAACCAAACTGCAAACTCTGTAACCTCCTA +
Preference number: 1 (lower is better)
Translates to: SGFSPLAHGNLGAKA*LQSMEPNCKLCNLL
Trigger: TAGGAGGTTACAGAGTTTGCAGTTTGGTTCCATGCTTTGAAGGCAGGCTTTAGCTCCCAGATTCCCATGTGCTAAAGGAGAGAACCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR TCA 90 bp CTCATCAACAAAGAATCCTCAGTTTCTCTGTGCTGTGGATGTAACTaGATGACCGAGCCAAGCAGTCCCCACTTAGATTCATTCTTCACT +
Preference number: 1 (lower is better)
Translates to: LINKESSVSLCCGCN*MTEPSSPHLDSFFT
Trigger: AGTGAAGAATGAATCTAAGTGGGGACTGCTTGGCTCGGTCATTCAGTTACATCCACAGCACAGAGAAACTGAGGATTCTTTGTTGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261406.7
3UTR TCA 90 bp TGGCTACTAAGGAACACAGTATGGGCAATGACTACTGTGACTTATTaGGGCATGCTAGGAAACATCTGGAAGGGCTATAGACCAGGAATT +
Preference number: 1 (lower is better)
Translates to: WLLRNTVWAMTTVTY*GMLGNIWKGYRPGI
Trigger: AATTCCTGGTCTATAGCCCTTCCAGATGTTTCCTAGCATGCCTCAATAAGTCACAGTAGTCATTGCCCATACTGTGTTCCTTAGTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 90 bp GCAAAACGCACCTCAGAACGTCATAAAGCCATCATGACTTTACTCTaGAATAGATACGATCCAGACACCTCATCAACAAAGAATCCTCAG +
Preference number: 1 (lower is better)
Translates to: AKRTSERHKAIMTLL*NRYDPDTSSTKNPQ
Trigger: CTGAGGATTCTTTGTTGATGAGGTGTCTGGATCGTATCTATTCCAGAGTAAAGTCATGATGGCTTTATGACGTTCTGAGGTGCGTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261406.7
3UTR CCA 90 bp ATGCTGATCTGGGGCAAGTTTGTGCTGTACAAATATGTCACCTGTTaGCTGGTCACAGTAAGTAGAAAAGTTGAAACAAGGTCCTATTTA +
Preference number: 1 (lower is better)
Translates to: MLIWGKFVLYKYVTC*LVTVSRKVETRSYL
Trigger: TAAATAGGACCTTGTTTCAACTTTTCTACTTACTGTGACCAGCCAACAGGTGACATATTTGTACAGCACAAACTTGCCCCAGATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR GCA 90 bp CCACCCCTTCTGGTTCCGCTGCATGTACATGCTGATCTGGGGCAAGTTTGTGCTGAACCAAGTGGCTCGTaGGCACACGGTCTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: PPLLVPLHVHADLGQVCAEPSGS*AHGLQL
Trigger: GAGCTGGAGACCGTGTGCGCACGAGCCACTTGGTTC...AGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CAA 90 bp ACTCAGCACAGTTCTTCCTTCTCCACGGCGGCTTGCTTCCAGGCTTaGCTGTTCTCCGTCACCGTCTTAACGTTCCTGCTAACCTGGCCT +
Preference number: 2 (lower is better)
Translates to: TQHSSSFSTAACFQA*LFSVTVLTFLLTWP
Trigger: AGGCCAGGTTAGCAGGAACGTTAAGACGGTGACGGAGAACAGCAAAGCCTGGAAGCAAGCCGCCGTGGAGAAGGAAGAACTGTGCTGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607161.5
3UTR-3UTR TCA 90 bp CTATGCGTCTTTCCCATCTGGGCAGAACCCCCTGTCGCTCACACTGACTTTGACTGTCTGGTTCACCACTaGTCTCAGCATCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: LCVFPIWAEPPVAHTDFDCLVHH*SQHQPQ
Trigger: CTGAGGCTGATGCTGAGATCAGTGGTGAACCAGACA...GTCAAAGTCAGTGTGAGCGACAGGGGGTTCTGCCCAGATGGGAAAGACGCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR GCA 90 bp TGGGAGGGACTCACTGCAACCTCAAAGGTTGCAAAGGACACTCCAGGCCTGTCTTTCCAGCTGTGCCTCTaGTGCCAGCCAAGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: WEGLTATSKVAKDTPGLSFQLCL*CQPSLH
Trigger: ATGAAGACTTGGCTGGCAGCAGAGGCACAGCTGGAA...AGACAGGCCTGGAGTGTCCTTTGCAACCTTTGAGGTTGCAGTGAGTCCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR CCA 90 bp CTGTCTTCCCAGATTGGAGGGCAGGGGTGTACCATGTCACCCCTATGCGTCTTTGAAAAGCCAGGGAGGTaGAAGATCGATGCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: LSSQIGGQGCTMSPLCVFEKPGR*KIDASS
Trigger: GCTGGAAGCATCGATCTTCCACCTCCCTGGCTTTTC...AAAGACGCATAGGGGTGACATGGTACACCCCTGCCCTCCAATCTGGGAAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR CCA 90 bp CTATGCGTCTTTCCCATCTGGGCAGAACCCCCTGTCGCTCACACTGACTTTGACTCTCCAGCTCCGCCTTaGGTCTGCTTTCCATCTCTA +
Preference number: 2 (lower is better)
Translates to: LCVFPIWAEPPVAHTDFDSPAPP*VCFPSL
Trigger: TAGAGATGGAAAGCAGACCCAAGGCGGAGCTGGAGA...GTCAAAGTCAGTGTGAGCGACAGGGGGTTCTGCCCAGATGGGAAAGACGCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CAA 90 bp AACAGAGTGAAGTACTCAGCACAGTTCTTCCTTCTCCACGGCGGCTaGCTTCCAGGCTTTGCTGTTCTCCGTCACCGTCTTAACGTTCCT +
Preference number: 2 (lower is better)
Translates to: NRVKYSAQFFLLHGG*LPGFAVLRHRLNVP
Trigger: AGGAACGTTAAGACGGTGACGGAGAACAGCAAAGCCTGGAAGCAAGCCGCCGTGGAGAAGGAAGAACTGTGCTGAGTACTTCACTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607161.5
3UTR CAA 90 bp CCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTaGGAACTCAACAACGTCCCCTCCTGCAAAACGCACCTCAGAACG +
Preference number: 2 (lower is better)
Translates to: PPSSHVFASVQYLTC*ELNNVPSCKTHLRT
Trigger: CGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTTGAGTTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
3UTR-3UTR GCA 90 bp TTTGCTGTTGTTTTGGGGGCATGGCGGCACATACCTATAGTCCTAGCTACTTGGAACAACGTCCCCTCCTaGAAAACGCACCTCAGAACG +
Preference number: 2 (lower is better)
Translates to: FAVVLGAWRHIPIVLATWNNVPS*KTHLRT
Trigger: CGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTT...CCAAGTAGCTAGGACTATAGGTATGTGCCGCCATGCCCCCAAAACAACAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000607161.5
3UTR-3UTR GCA 90 bp CCACCCCTTCTGGTTCCGCTGCATGTACATGCTGATCTGGGGCAAGTTTGTGCTACTCCACAGTCTCAGTaGAGAAAGATCATCTTCCAG +
Preference number: 2 (lower is better)
Translates to: PPLLVPLHVHADLGQVCATPQSQ*RKIIFQ
Trigger: CTGGAAGATGATCTTTCTGCACTGAGACTGTGGAGT...AGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR GCA 90 bp TTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGTTCTCCACGGCGGCTTaGTTCCAGGCTTTGCTGTTC +
Preference number: 2 (lower is better)
Translates to: FLRLLLMCLLVCNTSPVWFSTAA*FQALLF
Trigger: GAACAGCAAAGCCTGGAAGCAAGCCGCCGTGGAGAA...CCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607161.5
3UTR-3UTR GCA 90 bp TTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTTCACCCACGCTGGAATaGAGTGGCGGGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LPTKANSREVKYSAALEASPTLE*SGGISA
Trigger: AGCTGAGATCCCGCCACTGCATTCCAGCGTGGGTGA...AGCCTCAAGGGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR GCA 90 bp TTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCCTGTGCGGGACTGGTaGAGAAACTACTCGTCTCCC +
Preference number: 2 (lower is better)
Translates to: LPTKANSREVKYSAALEAPVRDW*RNYSSP
Trigger: GGGAGACGAGTAGTTTCTGCACCAGTCCCGCACAGG...AGCCTCAAGGGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CAA 90 bp GGTCCACTGTCTGCTGCCCTGACTTTCCTACAACTCTTAAGAGGTTaGCAGTCCCCATTCCTCATAGCCAGCCATAGAAATCTTTCCCTG +
Preference number: 2 (lower is better)
Translates to: GPLSAALTFLQLLRG*QSPFLIASHRNLSL
Trigger: CAGGGAAAGATTTCTATGGCTGGCTATGAGGAATGGGGACTGCAAACCTCTTAAGAGTTGTAGGAAAGTCAGGGCAGCAGACAGTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR TCA 90 bp TGGGAGGGACTCACTGCAACCTCAAAGGTTGCAAAGGACACTCCAGGCCTGTCTACTACTGTGACTTATTaGGGCATGCTAGGAAACATC +
Preference number: 2 (lower is better)
Translates to: WEGLTATSKVAKDTPGLSTTVTY*GMLGNI
Trigger: GATGTTTCCTAGCATGCCTCAATAAGTCACAGTAGT...AGACAGGCCTGGAGTGTCCTTTGCAACCTTTGAGGTTGCAGTGAGTCCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CAA 90 bp TGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCCCTaGAGGCTCTCCAAGGGAAAGGCGAATGAATATTCTCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: CQRRQTVEKLNTVLP*RLSKGKANEYSPGP
Trigger: AGGGCCTGGAGAATATTCATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR TCA 90 bp TTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTGCTGCATGTACATGCTaGTCTGGGGCAAGTTTGTGC +
Preference number: 2 (lower is better)
Translates to: LPTKANSREVKYSAALEAAACTC*SGASLC
Trigger: GCACAAACTTGCCCCAGATCAGCATGTACATGCAGC...AGCCTCAAGGGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR GCA 90 bp GTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCTCCAAGGGAAAGGCGAATTGCAACCTCAAAGGTTaGAAAGGACACTCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: VEKLNTVLPLRLSKGKANCNLKG*KGHSRP
Trigger: AGGCCTGGAGTGTCCTTTGCAACCTTTGAGGTTGCA...ATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAACTTCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR GCA 90 bp TTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTTCTCAGGAAGGAGTATaGATTTTGACGGGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LPTKANSREVKYSAALEASQEGV*ILTGLG
Trigger: GCCCAGGCCCGTCAAAATGCATACTCCTTCCTGAGA...AGCCTCAAGGGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR GCA 90 bp TGTGGCTCTTTGAAACAAACCCCCGCTTCACTGGCACCATTGCCTCATTCAACAACAGGCACGCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: CGSLKQTPASLAPLPHSTTGTPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGCGTGCCTGT...TGTTGAATGAGGCAATGGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR TCA 90 bp ATGACTTTACTCTGGAATAGATACGATCCAGACACCTCATCAACAAAGAATCCTGTGGATGTAACTGAATaGCCGAGCCAAGCAGTCCCC +
Preference number: 2 (lower is better)
Translates to: MTLLWNRYDPDTSSTKNPVDVTE*PSQAVP
Trigger: GGGGACTGCTTGGCTCGGTCATTCAGTTACATCCAC...AGGATTCTTTGTTGATGAGGTGTCTGGATCGTATCTATTCCAGAGTAAAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261406.7
3UTR-3UTR CCA 90 bp ATAATTTGCTGTTGTTTTGGGGGCATGGCGGCACATACCTATAGTCCTAGCTACACGTTCCTGCTAACCTaGCCTGCTGCATTCTTTTTA +
Preference number: 2 (lower is better)
Translates to: IICCCFGGMAAHTYSPSYTFLLT*PAAFFL
Trigger: TAAAAAGAATGCAGCAGGCCAGGTTAGCAGGAACGT...GTAGCTAGGACTATAGGTATGTGCCGCCATGCCCCCAAAACAACAGCAAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607161.5
3UTR CAA 90 bp TGGGCCCCTCTGTACTTAACATTCCAAATGCTCATTCCAAACACTTaGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: WAPLYLTFQMLIPNT*PTKANSREVKYSAA
Trigger: GGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAATGAGCATTTGGAATGTTAAGTACAGAGGGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR TCA 90 bp TACTCTGGAATAGATACGATCCAGACACCTCATCAACAAAGAATCCTCAGTTTCTGCTGTGGATGTAACTaGATGACCGAGCCAAGCAGT +
Preference number: 2 (lower is better)
Translates to: YSGIDTIQTPHQQRILSFCCGCN*MTEPSS
Trigger: ACTGCTTGGCTCGGTCATTCAGTTACATCCACAGCA...GAAACTGAGGATTCTTTGTTGATGAGGTGTCTGGATCGTATCTATTCCAGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261406.7
3UTR-3UTR GCA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTCAGCTGTGCCTCTGCTaGCAGCCAAGTCTTCATTTG +
Preference number: 2 (lower is better)
Translates to: IPNTLPTKANSREVKYSAQLCLC*QPSLHL
Trigger: CAAATGAAGACTTGGCTGGCAGCAGAGGCACAGCTG...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR GCA 90 bp ATAATTTGCTGTTGTTTTGGGGGCATGGCGGCACATACCTATAGTCCTAGCTACCCTGCTAACCTGGCCTaGTGCATTCTTTTTATTTTT +
Preference number: 2 (lower is better)
Translates to: IICCCFGGMAAHTYSPSYPANLA*CILFIF
Trigger: AAAAATAAAAAGAATGCAGCAGGCCAGGTTAGCAGG...GTAGCTAGGACTATAGGTATGTGCCGCCATGCCCCCAAAACAACAGCAAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607161.5
3UTR-3UTR CCA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTAAGTGCGTTAAGACCTaGGTGTTACTCCAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: IPNTLPTKANSREVKYSAKCVKT*VLLQLC
Trigger: GCAGAGCTGGAGTAACACCCAGGTCTTAACGCACTT...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR TCA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTATGCCTGTGCCAACATaGAGGTGTGGCTCTTTGAAA +
Preference number: 2 (lower is better)
Translates to: IPNTLPTKANSREVKYSAMPVPT*RCGSLK
Trigger: TTTCAAAGAGCCACACCTTCATGTTGGCACAGGCAT...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR GCA 90 bp TTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCAAAACAACCAGGTTTaGAAGAACAGTATTCATAGG +
Preference number: 2 (lower is better)
Translates to: LPTKANSREVKYSAALEAQNNQV*KNSIHR
Trigger: CCTATGAATACTGTTCTTGCAAACCTGGTTGTTTTG...AGCCTCAAGGGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR GCA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTACTAGCATTCCTGACTaGTCTCTTTCACAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: IPNTLPTKANSREVKYSATSIPD*SLSQFF
Trigger: GAAGAACTGTGAAAGAGAGCAGTCAGGAATGCTAGT...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR CCA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGACATCAACAGTTTCTaGTTTCAGAACAGGTTCTAC +
Preference number: 2 (lower is better)
Translates to: IPNTLPTKANSREVKYSADINSF*FQNRFY
Trigger: GTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTC...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 72 bp CAACACCAACGCCTGGGTGGCCCGGTGAGCTGCTGGTaGGGAGCCTGGACCCTGGTTCCTTCCTTCCACTGT +
Preference number: 3 (lower is better)
Translates to: QHQRLGGPVSCW*GAWTLVPSFHC
Trigger: ACAGTGGAAGGAAGGAACCAGGGTCCAGGCTCCCCACCAGCAGCTCACCGGGCCACCCAGGCGTTGGTGTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 72 bp CATCAACACCAACGCCTGGGTGGCCCGGTGAGCTGCTaGTGGGGAGCCTGGACCCTGGTTCCTTCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: HQHQRLGGPVSC*WGAWTLVPSFH
Trigger: GTGGAAGGAAGGAACCAGGGTCCAGGCTCCCCACCAGCAGCTCACCGGGCCACCCAGGCGTTGGTGTTGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR GCA 72 bp CAACATCAACACCAACGCCTGGGTGGCCCGGTGAGCTaGTGGTGGGGAGCCTGGACCCTGGTTCCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: QHQHQRLGGPVS*WWGAWTLVPSF
Trigger: GAAGGAAGGAACCAGGGTCCAGGCTCCCCACCAGCAGCTCACCGGGCCACCCAGGCGTTGGTGTTGATGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR TCA 72 bp TGCCAGCCGTGCTGGGACATGTTCATCAGCCAGCACTaGACAACCTTCGCGGGCACAGGGCTGTGCCAGGTG +
Preference number: 3 (lower is better)
Translates to: CQPCWDMFISQH*TTFAGTGLCQV
Trigger: CACCTGGCACAGCCCTGTGCCCGCGAAGGTTGTTCAGTGCTGGCTGATGAACATGTCCCAGCACGGCTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR TCA 72 bp TCATTCAACATCAACACCAACGCCTGGGTGGCCCGGTaGGCTGCTGGTGGGGAGCCTGGACCCTGGTTCCTT +
Preference number: 3 (lower is better)
Translates to: SFNINTNAWVAR*AAGGEPGPWFL
Trigger: AAGGAACCAGGGTCCAGGCTCCCCACCAGCAGCTCACCGGGCCACCCAGGCGTTGGTGTTGATGTTGAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR CAA 90 bp CTGTCTTCCCAGATTGGAGGGCAGGGGTGTACCATGTCACCCCTATGCGTCTTTCAAACTCCTCTTGTCTaGCAGGTGGCCTGTGCGGGA +
Preference number: 3 (lower is better)
Translates to: LSSQIGGQGCTMSPLCVFQTPLV*QVACAG
Trigger: TCCCGCACAGGCCACCTGCAAGACAAGAGGAGTTTG...AAAGACGCATAGGGGTGACATGGTACACCCCTGCCCTCCAATCTGGGAAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 72 bp GGGTGTACCATGTCACCCCTATGCGTCTTTCCCATCTaGGCAGAACCCCCTGTCGCTCACACTGACTTTGAC +
Preference number: 3 (lower is better)
Translates to: GCTMSPLCVFPI*AEPPVAHTDFD
Trigger: GTCAAAGTCAGTGTGAGCGACAGGGGGTTCTGCCCAGATGGGAAAGACGCATAGGGGTGACATGGTACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 72 bp AAGTGGCTCGTGCGCACACGGTCTCCAGCTCCGCCTTaGGTCTGCTTTCCATCTCTAAAAGTAATCAGTCAG +
Preference number: 3 (lower is better)
Translates to: KWLVRTRSPAPP*VCFPSLKVISQ
Trigger: CTGACTGATTACTTTTAGAGATGGAAAGCAGACCCAAGGCGGAGCTGGAGACCGTGTGCGCACGAGCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 72 bp AAGGCAAAGTGGGATGCCTGTGCCAACATGAAGGTGTaGCTCTTTGAAACAAACCCCCGCTTCACTGGCACC +
Preference number: 3 (lower is better)
Translates to: KAKWDACANMKV*LFETNPRFTGT
Trigger: GGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCCACACCTTCATGTTGGCACAGGCATCCCACTTTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 72 bp TGCACTGTGCTTTCTTCCCTCAAGAACCACCCCTTCTaGTTCCGCTGCATGTACATGCTGATCTGGGGCAAG +
Preference number: 3 (lower is better)
Translates to: CTVLSSLKNHPF*FRCMYMLIWGK
Trigger: CTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGGTTCTTGAGGGAAGAAAGCACAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR GCA 72 bp CTTTCTTCCCTCAAGAACCACCCCTTCTGGTTCCGCTaGATGTACATGCTGATCTGGGGCAAGTTTGTGCTG +
Preference number: 3 (lower is better)
Translates to: LSSLKNHPFWFR*MYMLIWGKFVL
Trigger: CAGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGGTTCTTGAGGGAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR CAA 90 bp ATAATTTGCTGTTGTTTTGGGGGCATGGCGGCACATACCTATAGTCCTAGCTACCTTCTCCACGGCGGCTaGCTTCCAGGCTTTGCTGTT +
Preference number: 3 (lower is better)
Translates to: IICCCFGGMAAHTYSPSYLLHGG*LPGFAV
Trigger: AACAGCAAAGCCTGGAAGCAAGCCGCCGTGGAGAAG...GTAGCTAGGACTATAGGTATGTGCCGCCATGCCCCCAAAACAACAGCAAATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607161.5
3UTR TCA 72 bp AAAAGGGCAAGGCAAAGTGGGATGCCTGTGCCAACATaGAGGTGTGGCTCTTTGAAACAAACCCCCGCTTCA +
Preference number: 3 (lower is better)
Translates to: KRARQSGMPVPT*RCGSLKQTPAS
Trigger: TGAAGCGGGGGTTTGTTTCAAAGAGCCACACCTTCATGTTGGCACAGGCATCCCACTTTGCCTTGCCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR TCA 72 bp AGTATGCATTTTGACGGGCCTGGGCTTCAATGGCTTTaGAGAAAAGGGCAAGGCAAAGTGGGATGCCTGTGC +
Preference number: 3 (lower is better)
Translates to: SMHFDGPGLQWL*RKGQGKVGCLC
Trigger: GCACAGGCATCCCACTTTGCCTTGCCCTTTTCTTCAAAGCCATTGAAGCCCAGGCCCGTCAAAATGCATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 72 bp CACCCCTTCTGGTTCCGCTGCATGTACATGCTGATCTaGGGCAAGTTTGTGCTGTACAAATATGTCACCTGT +
Preference number: 3 (lower is better)
Translates to: HPFWFRCMYMLI*GKFVLYKYVTC
Trigger: ACAGGTGACATATTTGTACAGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR CAA 90 bp GTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCTCCAAGGGAAAGGCGAATCAGCCCTTCTACTATTaGGTGCAACAGACCATCCAC +
Preference number: 3 (lower is better)
Translates to: VEKLNTVLPLRLSKGKANQPFYY*VQQTIH
Trigger: GTGGATGGTCTGTTGCACCAAATAGTAGAAGGGCTG...ATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAACTTCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR TCA 72 bp AGAACCACCCCTTCTGGTTCCGCTGCATGTACATGCTaGTCTGGGGCAAGTTTGTGCTGTACAAATATGTCA +
Preference number: 3 (lower is better)
Translates to: RTTPSGSAACTC*SGASLCCTNMS
Trigger: TGACATATTTGTACAGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR TCA 72 bp CATCTACAAGTGCATGTTGGTTTTGCTCTAGATCTGTaGGTTGTCAATGCCAGCCGTGCTGGGACATGTTCA +
Preference number: 3 (lower is better)
Translates to: HLQVHVGFALDL*VVNASRAGTCS
Trigger: TGAACATGTCCCAGCACGGCTGGCATTGACAACTCACAGATCTAGAGCAAAACCAACATGCACTTGTAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR GCA 72 bp ACACACACACACACACACACACACACACACATAATTTaGTGTTGTTTTGGGGGCATGGCGGCACATACCTAT +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTHII*CCFGGMAAHTY
Trigger: ATAGGTATGTGCCGCCATGCCCCCAAAACAACAGCAAATTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607161.5
3UTR TCA 72 bp AAAGAATCCTCAGTTTCTCTGTGCTGTGGATGTAACTaGATGACCGAGCCAAGCAGTCCCCACTTAGATTCA +
Preference number: 3 (lower is better)
Translates to: KESSVSLCCGCN*MTEPSSPHLDS
Trigger: TGAATCTAAGTGGGGACTGCTTGGCTCGGTCATTCAGTTACATCCACAGCACAGAGAAACTGAGGATTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261406.7
3UTR TCA 72 bp AGGAACACAGTATGGGCAATGACTACTGTGACTTATTaGGGCATGCTAGGAAACATCTGGAAGGGCTATAGA +
Preference number: 3 (lower is better)
Translates to: RNTVWAMTTVTY*GMLGNIWKGYR
Trigger: TCTATAGCCCTTCCAGATGTTTCCTAGCATGCCTCAATAAGTCACAGTAGTCATTGCCCATACTGTGTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CCA 72 bp TGGGGCAAGTTTGTGCTGTACAAATATGTCACCTGTTaGCTGGTCACAGTAAGTAGAAAAGTTGAAACAAGG +
Preference number: 3 (lower is better)
Translates to: WGKFVLYKYVTC*LVTVSRKVETR
Trigger: CCTTGTTTCAACTTTTCTACTTACTGTGACCAGCCAACAGGTGACATATTTGTACAGCACAAACTTGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR-3UTR CAA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCTTCACTGGCACCATaGCCTCATTCAACATCAACA +
Preference number: 3 (lower is better)
Translates to: IPNTLPTKANSREVKYSAASLAP*PHSTST
Trigger: TGTTGATGTTGAATGAGGCAATGGTGCCAGTGAAGC...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CCACCCCTTCTGGTTCCGCTGCATGTACATGCTGATCTGGGGCAAGTTTGTGCTTCGGGGCCGCTTGGGTaGCAGAGCATCCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PPLLVPLHVHADLGQVCASGPLG*QSIPVL
Trigger: CAGGACTGGGATGCTCTGCCACCCAAGCGGCCCCGA...AGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCAGGTGGCCCGGTGAGCTaGTGGTGGGGAGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: SVTSYLSLKSRGTNSFTPGGPVS*WWGAWT
Trigger: GGTCCAGGCTCCCCACCAGCAGCTCACCGGGCCACC...TGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp TCACCTGTTTGGAACTCAACAACGTCCCCTCCTGCAAAACGCACCTCAGAACGTTCGGGGCCGCTTGGGTaGCAGAGCATCCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SPVWNSTTSPPAKRTSERSGPLG*QSIPVL
Trigger: CAGGACTGGGATGCTCTGCCACCCAAGCGGCCCCGA...ACGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTTGAGTTCCAAACAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR CCA 90 bp CACCTGTTTGGAACTCAACAACGTCCCCTCCTGCAAAACGCACCTCAGAACGTCCTAGTCGGGGCCGCTTaGGTGGCAGAGCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: HLFGTQQRPLLQNAPQNVLVGAA*VAEHPS
Trigger: ACTGGGATGCTCTGCCACCCAAGCGGCCCCGACTAG...GACGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTTGAGTTCCAAACAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR CCA 90 bp GCAAACTCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTGGCCCGGTGAGCTGCTaGTGGGGAGCCTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: ANSVTSYLSLKSRGTNSFGPVSC*WGAWTL
Trigger: CAGGGTCCAGGCTCCCCACCAGCAGCTCACCGGGCC...AAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGAGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CCACCCCTTCTGGTTCCGCTGCATGTACATGCTGATCTGGGGCAAGTTTGTGCTTTCGTTCACGAGGCTTaGATCCATCACTGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: PPLLVPLHVHADLGQVCAFVHEA*IHHWAR
Trigger: CCGCGCCCAGTGATGGATTCAAGCCTCGTGAACGAA...AGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TGGGAGGGACTCACTGCAACCTCAAAGGTTGCAAAGGACACTCCAGGCCTGTCTCTGGGGGCCATCAGCTaGTCGAACACTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: WEGLTATSKVAKDTPGLSLGAIS*SNTELV
Trigger: CACAAGCTCAGTGTTCGAGCAGCTGATGGCCCCCAG...AGACAGGCCTGGAGTGTCCTTTGCAACCTTTGAGGTTGCAGTGAGTCCCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp GGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCCTTTGCCCCAGACCCTCTGGCACGGCCTaGACTCAGGATACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GLVQKLLVSLFTALLCPRPSGTA*TQDTWS
Trigger: AGACCAGGTATCCTGAGTGCAGGCCGTGCCAGAGGG...TCTGGGGCAAAGGAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp GTGCGGGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCCTTTGCCCAGGGCTGTGCCAGGTaGACATTTAGCACCCGTTGC +
Preference number: 4 (lower is better)
Translates to: VRDWCRNYSSPFSQHSFAQGCAR*TFSTRC
Trigger: GCAACGGGTGCTAAATGTGCACCTGGCACAGCCCTG...GGCAAAGGAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCCCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp GGAACTCAACAACGTCCCCTCCTGCAAAACGCACCTCAGAACGTCATAAAGCCACTGGTGGGTGATATCTaGCCGCGCTTCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GTQQRPLLQNAPQNVIKPLVGDI*PRFPRV
Trigger: GACCCTGGGGAAGCGCGGCCAGATATCACCCACCAG...TGGCTTTATGACGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTTGAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR CCA 90 bp TGGGAGGGACTCACTGCAACCTCAAAGGTTGCAAAGGACACTCCAGGCCTGTCTTGCGTCTTTCCCATCTaGGCAGAACCCCCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: WEGLTATSKVAKDTPGLSCVFPI*AEPPVA
Trigger: AGCGACAGGGGGTTCTGCCCAGATGGGAAAGACGCA...AGACAGGCCTGGAGTGTCCTTTGCAACCTTTGAGGTTGCAGTGAGTCCCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp GTGGCCTGTGCGGGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCGCTCACGCACATCACTaGCAACCGGGATGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: VACAGLVQKLLVSLFTALAHAHH*QPGWKK
Trigger: CTTTTTCCATCCCGGTTGTCAGTGATGTGCGTGAGC...GAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCCCGCACAGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp TGGGAGGGACTCACTGCAACCTCAAAGGTTGCAAAGGACACTCCAGGCCTGTCTATACAGTGCTGCCCTTaGGGCTCTCCAAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: WEGLTATSKVAKDTPGLSIQCCP*GSPRER
Trigger: CCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTAT...AGACAGGCCTGGAGTGTCCTTTGCAACCTTTGAGGTTGCAGTGAGTCCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CCACCCCTTCTGGTTCCGCTGCATGTACATGCTGATCTGGGGCAAGTTTGTGCTAGGGGTGCAAGGCCCTaGCTGCTCCACTTTTTCTAC +
Preference number: 4 (lower is better)
Translates to: PPLLVPLHVHADLGQVCARGARP*LLHFFY
Trigger: GTAGAAAAAGTGGAGCAGGCAGGGCCTTGCACCCCT...AGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp GGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCCTTTGCCCCAGACGATGCTTCCAGCTGTaGCTCTGCTGCCAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: GLVQKLLVSLFTALLCPRRCFQL*LCCQPS
Trigger: ACTTGGCTGGCAGCAGAGGCACAGCTGGAAGCATCG...TCTGGGGCAAAGGAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp GGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCCTTTGCCCCAGACCTGTGCGGGACTGGTaGAGAAACTACTCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GLVQKLLVSLFTALLCPRPVRDW*RNYSSP
Trigger: GGGAGACGAGTAGTTTCTGCACCAGTCCCGCACAGG...TCTGGGGCAAAGGAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp TTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGTCGGGGCCGCTTGGGTaGCAGAGCATCCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: FLRLLLMCLLVCNTSPVWSGPLG*QSIPVL
Trigger: CAGGACTGGGATGCTCTGCCACCCAAGCGGCCCCGA...CCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR CCA 90 bp CTATGCGTCTTTCCCATCTGGGCAGAACCCCCTGTCGCTCACACTGACTTTGACTGGCCTGTGCGGGACTaGTGCAGAAACTACTCGTCT +
Preference number: 4 (lower is better)
Translates to: LCVFPIWAEPPVAHTDFDWPVRD*CRNYSS
Trigger: AGACGAGTAGTTTCTGCACCAGTCCCGCACAGGCCA...GTCAAAGTCAGTGTGAGCGACAGGGGGTTCTGCCCAGATGGGAAAGACGCATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CCACCCCTTCTGGTTCCGCTGCATGTACATGCTGATCTGGGGCAAGTTTGTGCTCAATGCCAGCCGTGCTaGGACATGTTCATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PPLLVPLHVHADLGQVCAQCQPC*DMFISQ
Trigger: CTGGCTGATGAACATGTCCCAGCACGGCTGGCATTG...AGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp TCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCAAAGGACCAGTCAGTTTaGGGGTCGCCCCACCCACCC +
Preference number: 4 (lower is better)
Translates to: SVTSYLSLKSRGTNSFTPKDQSV*GSPHPP
Trigger: GGGTGGGTGGGGCGACCCTCAAACTGACTGGTCCTT...TGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CTATGCGTCTTTCCCATCTGGGCAGAACCCCCTGTCGCTCACACTGACTTTGACGAAGGTGTGGCTCTTTaGAACAAACCCCCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LCVFPIWAEPPVAHTDFDEGVAL*NKPPLH
Trigger: GTGAAGCGGGGGTTTGTTTCAAAGAGCCACACCTTC...GTCAAAGTCAGTGTGAGCGACAGGGGGTTCTGCCCAGATGGGAAAGACGCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAAAGCATCCCAGTCCTGTaGCTGCTCCCCACCGCTTCG +
Preference number: 4 (lower is better)
Translates to: PPPSSHVFASVQYLTCLESIPVL*LLPTAS
Trigger: CGAAGCGGTGGGGAGCAGGCACAGGACTGGGATGCT...TTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR GCA 90 bp GGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCCTTTGCCCCAGAGTAATCAGTCAGCACTaGCTCCTGTACCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLVQKLLVSLFTALLCPRVISQH*LLYPLG
Trigger: CCCCAGAGGGTACAGGAGGCAGTGCTGACTGATTAC...TCTGGGGCAAAGGAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp GCAAACTCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTCTAGTCGGGGCCGCTTaGGTGGCAGAGCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: ANSVTSYLSLKSRGTNSFLVGAA*VAEHPS
Trigger: ACTGGGATGCTCTGCCACCCAAGCGGCCCCGACTAG...AAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGAGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp GTGGCCTGTGCGGGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCGCAAATGTACAGCCTTaGCTTCCCCAAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: VACAGLVQKLLVSLFTALANVQP*LPQTPQ
Trigger: CTGTGGAGTTTGGGGAAGCCAAGGCTGTACATTTGC...GAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCCCGCACAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp TTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTACACCAACGCCTGGGTaGCCCGGTGAGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LPTKANSREVKYSAALEATPTPG*PGELLV
Trigger: CACCAGCAGCTCACCGGGCCACCCAGGCGTTGGTGT...AGCCTCAAGGGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CAA 72 bp AAGTACTCAGCACAGTTCTTCCTTCTCCACGGCGGCTaGCTTCCAGGCTTTGCTGTTCTCCGTCACCGTCTT +
Preference number: 4 (lower is better)
Translates to: KYSAQFFLLHGG*LPGFAVLRHRL
Trigger: AAGACGGTGACGGAGAACAGCAAAGCCTGGAAGCAAGCCGCCGTGGAGAAGGAAGAACTGTGCTGAGTACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607161.5
3UTR CAA 72 bp CAAGTGGCTCGTGCGCACACGGTCTCCAGCTCCGCCTaGGGTCTGCTTTCCATCTCTAAAAGTAATCAGTCA +
Preference number: 4 (lower is better)
Translates to: QVARAHTVSSSA*GLLSISKSNQS
Trigger: TGACTGATTACTTTTAGAGATGGAAAGCAGACCCAAGGCGGAGCTGGAGACCGTGTGCGCACGAGCCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CAA 72 bp GGCTCTTTGAAACAAACCCCCGCTTCACTGGCACCATaGCCTCATTCAACATCAACACCAACGCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GSLKQTPASLAP*PHSTSTPTPGW
Trigger: CCACCCAGGCGTTGGTGTTGATGTTGAATGAGGCAATGGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CAA 72 bp CTCTCTGCCTATTGTGAAGGCAATCAGGCCAGACTATaGAGGGCATCTGGCAGCAGGACTCAGGCAGGTATG +
Preference number: 4 (lower is better)
Translates to: LSAYCEGNQARL*RASGSRTQAGM
Trigger: CATACCTGCCTGAGTCCTGCTGCCAGATGCCCTCAATAGTCTGGCCTGATTGCCTTCACAATAGGCAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAAGCAAACTCTGGTGGGTaGTATCTGGCCGCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PPPSSHVFASVQYLTCLEANSGG*YLAALP
Trigger: GGGAAGCGCGGCCAGATATCACCCACCAGAGTTTGC...TTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR TCA 90 bp GTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCTCCAAGGGAAAGGCGAATGCAAACTCTGGTGGGTaGTATCTGGCCGCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: VEKLNTVLPLRLSKGKANANSGG*YLAALP
Trigger: GGGAAGCGCGGCCAGATATCACCCACCAGAGTTTGC...ATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAACTTCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CTCCCAATTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTTCGTTCACGAGGCTTaGATCCATCACTGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: LPIPPPSSHVFASVQYLTFVHEA*IHHWAR
Trigger: CCGCGCCCAGTGATGGATTCAAGCCTCGTGAACGAA...GGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAATTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR TCA 90 bp TCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCACTGGTCTCGAACTCCTaGCCGCAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: SVTSYLSLKSRGTNSFTPLVSNS*PQVIHP
Trigger: CGGGTGGATCACTTGCGGTCAGGAGTTCGAGACCAG...TGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp GGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCCTTTGCCCCAGAGGCAAGAGCCCTAACTaGGCTATTCCCTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GLVQKLLVSLFTALLCPRGKSPN*AIPSQE
Trigger: TTCCTGAGAGGGAATAGCTCAGTTAGGGCTCTTGCC...TCTGGGGCAAAGGAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CTGTCTTCCCAGATTGGAGGGCAGGGGTGTACCATGTCACCCCTATGCGTCTTTAGCCAGCCACAAGTGTaGAAAGGAAGAGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LSSQIGGQGCTMSPLCVFSQPQV*KGRVLR
Trigger: TCTCAGCACTCTTCCTTTTCACACTTGTGGCTGGCT...AAAGACGCATAGGGGTGACATGGTACACCCCTGCCCTCCAATCTGGGAAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CTGTCTTCCCAGATTGGAGGGCAGGGGTGTACCATGTCACCCCTATGCGTCTTTAGTCTCTGCTCTCTGTaGCCAGGAACTTCACTCGTT +
Preference number: 4 (lower is better)
Translates to: LSSQIGGQGCTMSPLCVFSLCSL*PGTSLV
Trigger: AACGAGTGAAGTTCCTGGTCACAGAGAGCAGAGACT...AAAGACGCATAGGGGTGACATGGTACACCCCTGCCCTCCAATCTGGGAAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CTGTCTTCCCAGATTGGAGGGCAGGGGTGTACCATGTCACCCCTATGCGTCTTTCTGGGAGGGACTCACTaGAACCTCAAAGGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LSSQIGGQGCTMSPLCVFLGGTH*NLKGCK
Trigger: TTTGCAACCTTTGAGGTTGCAGTGAGTCCCTCCCAG...AAAGACGCATAGGGGTGACATGGTACACCCCTGCCCTCCAATCTGGGAAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CTATGCGTCTTTCCCATCTGGGCAGAACCCCCTGTCGCTCACACTGACTTTGACTTCCAGCATCATTCCTaGTCTCAAGCGCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LCVFPIWAEPPVAHTDFDFQHHS*SQAPES
Trigger: AGACTCAGGCGCTTGAGAGCAGGAATGATGCTGGAA...GTCAAAGTCAGTGTGAGCGACAGGGGGTTCTGCCCAGATGGGAAAGACGCATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CTGTCTTCCCAGATTGGAGGGCAGGGGTGTACCATGTCACCCCTATGCGTCTTTAAGTGCGTTAAGACCTaGGTGTTACTCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSSQIGGQGCTMSPLCVFKCVKT*VLLQLC
Trigger: GCAGAGCTGGAGTAACACCCAGGTCTTAACGCACTT...AAAGACGCATAGGGGTGACATGGTACACCCCTGCCCTCCAATCTGGGAAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTCCGGTGAGCTGCTGGTaGGGAGCCTGGACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTPVSCW*GAWTLV
Trigger: AACCAGGGTCCAGGCTCCCCACCAGCAGCTCACCGG...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp ATAATTTGCTGTTGTTTTGGGGGCATGGCGGCACATACCTATAGTCCTAGCTACGCAAACTCTGGTGGGTaGTATCTGGCCGCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: IICCCFGGMAAHTYSPSYANSGG*YLAALP
Trigger: GGGAAGCGCGGCCAGATATCACCCACCAGAGTTTGC...GTAGCTAGGACTATAGGTATGTGCCGCCATGCCCCCAAAACAACAGCAAATTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR TCA 90 bp GTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCTCCAAGGGAAAGGCGAATCTGCTCTCAAGCGCCTaGGTCTGGGCCTTTTCTACC +
Preference number: 4 (lower is better)
Translates to: VEKLNTVLPLRLSKGKANLLSSA*VWAFST
Trigger: GGTAGAAAAGGCCCAGACTCAGGCGCTTGAGAGCAG...ATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAACTTCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TCAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACTCCCAGTCCTGTGCCTaGTCCCCACCGCTTCGTTCA +
Preference number: 4 (lower is better)
Translates to: SAQTRVKGCDINSFWFQNSQSCA*SPPLRS
Trigger: TGAACGAAGCGGTGGGGAGCAGGCACAGGACTGGGA...GTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CTCCGTCACCGTCTTAACGTTCCTGCTAACCTGGCCTGCTGCATTCTTTTTATTCTGGGGGCCATCAGCTaGTCGAACACTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LRHRLNVPANLACCILFILGAIS*SNTELV
Trigger: CACAAGCTCAGTGTTCGAGCAGCTGATGGCCCCCAG...AATAAAAAGAATGCAGCAGGCCAGGTTAGCAGGAACGTTAAGACGGTGACGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR GCA 90 bp TCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCATCACCCACGCTGGAATaGAGTGGCGGGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SVTSYLSLKSRGTNSFTPSPTLE*SGGISA
Trigger: AGCTGAGATCCCGCCACTGCATTCCAGCGTGGGTGA...TGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCCCTCCCTCCCCAGGCTaGCAGGCTCATTCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: QTRVKGCDINSFWFQNRFPPSPG*QAHSRE
Trigger: CTCTCTTGAATGAGCCTGGCAGCCTGGGGAGGGAGG...GAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CTATGCGTCTTTCCCATCTGGGCAGAACCCCCTGTCGCTCACACTGACTTTGACATTCTCCAGGCCCTCTaGTTATTCCTCTCTGCCTAT +
Preference number: 4 (lower is better)
Translates to: LCVFPIWAEPPVAHTDFDILQAL*LFLSAY
Trigger: ATAGGCAGAGAGGAATAAGCAGAGGGCCTGGAGAAT...GTCAAAGTCAGTGTGAGCGACAGGGGGTTCTGCCCAGATGGGAAAGACGCATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTCTGGTGGGTGATATCTaGCCGCGCTTCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTLVGDI*PRFPRV
Trigger: GACCCTGGGGAAGCGCGGCCAGATATCACCCACCAG...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CCA 90 bp CCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAACTCAACCTGGTGGGTGATATCTaGCCGCGCTTCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PSSHVFASVQYLTCLELNLVGDI*PRFPRV
Trigger: GACCCTGGGGAAGCGCGGCCAGATATCACCCACCAG...GTTGAGTTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR CCA 90 bp TCACCTGTTTGGAACTCAACAACGTCCCCTCCTGCAAAACGCACCTCAGAACGTATCAGCAAACTCTGGTaGGTGATATCTGGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: SPVWNSTTSPPAKRTSERISKLW*VISGRA
Trigger: AGCGCGGCCAGATATCACCCACCAGAGTTTGCTGAT...ACGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTTGAGTTCCAAACAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR CCA 90 bp GGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCCTTTGCCCCAGATATTTAGACAAGCCATaGGGGCCAGTATGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GLVQKLLVSLFTALLCPRYLDKP*GPVWGV
Trigger: CACTCCCCATACTGGCCCCCATGGCTTGTCTAAATA...TCTGGGGCAAAGGAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTGCAAACTCTGGTGGGTaGTATCTGGCCGCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTANSGG*YLAALP
Trigger: GGGAAGCGCGGCCAGATATCACCCACCAGAGTTTGC...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR TCA 90 bp GTGCGGGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCCTTTGCCGAAAAGGAAGAGTGCTaGGAGAAACTGCCTAGTCAT +
Preference number: 4 (lower is better)
Translates to: VRDWCRNYSSPFSQHSFAEKEEC*EKLPSH
Trigger: ATGACTAGGCAGTTTCTCTCAGCACTCTTCCTTTTC...GGCAAAGGAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCCCGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAACTCAACTCCCAGTCCTGTGCCTaGTCCCCACCGCTTCGTTCA +
Preference number: 4 (lower is better)
Translates to: PSSHVFASVQYLTCLELNSQSCA*SPPLRS
Trigger: TGAACGAAGCGGTGGGGAGCAGGCACAGGACTGGGA...GTTGAGTTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR GCA 90 bp TTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGGCAAGTCGCATCTCTTaGCATGGGCAAAGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: FLRLLLMCLLVCNTSPVWASRIS*HGQRPL
Trigger: TAGGGGCCTTTGCCCATGGCAAGAGATGCGACTTGC...CCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR GCA 90 bp TTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGACGATCCAGACACCTTaGCATGGGCAAAGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: FLRLLLMCLLVCNTSPVWTIQTP*HGQRPL
Trigger: TAGGGGCCTTTGCCCATGGCAAGGTGTCTGGATCGT...CCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR GCA 90 bp CTATGCGTCTTTCCCATCTGGGCAGAACCCCCTGTCGCTCACACTGACTTTGACCTTCACTGGCACCATTaGCTCATTCAACATCAACAC +
Preference number: 4 (lower is better)
Translates to: LCVFPIWAEPPVAHTDFDLHWHH*LIQHQH
Trigger: GTGTTGATGTTGAATGAGGCAATGGTGCCAGTGAAG...GTCAAAGTCAGTGTGAGCGACAGGGGGTTCTGCCCAGATGGGAAAGACGCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp GGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTACTCTGGTGGGTGATATCTaGCCGCGCTTCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GSKDVTSTVSGFRTGSTTLVGDI*PRFPRV
Trigger: GACCCTGGGGAAGCGCGGCCAGATATCACCCACCAG...AGTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CCA 90 bp CTCCCAATTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCATCAGCAAACTCTGGTaGGTGATATCTGGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: LPIPPPSSHVFASVQYLTISKLW*VISGRA
Trigger: AGCGCGGCCAGATATCACCCACCAGAGTTTGCTGAT...GGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAATTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR CCA 90 bp GTGCGGGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCCTTTGCCCCTGCCTTCAAAGCATaGAACCAAACTGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: VRDWCRNYSSPFSQHSFAPAFKA*NQTANS
Trigger: AGAGTTTGCAGTTTGGTTCCATGCTTTGAAGGCAGG...GGCAAAGGAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCCCGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp TGTGGCTCTTTGAAACAAACCCCCGCTTCACTGGCACCATTGCCTCATTCAACAACTGTCTTCCCAGATTaGAGGGCAGGGGTGTACCAT +
Preference number: 4 (lower is better)
Translates to: CGSLKQTPASLAPLPHSTTVFPD*RAGVYH
Trigger: ATGGTACACCCCTGCCCTCCAATCTGGGAAGACAGT...TGTTGAATGAGGCAATGGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp TGTGGCTCTTTGAAACAAACCCCCGCTTCACTGGCACCATTGCCTCATTCAACAAAGGGCAAGGCAAAGTaGGATGCCTGTGCCAACATG +
Preference number: 4 (lower is better)
Translates to: CGSLKQTPASLAPLPHSTKGKAK*DACANM
Trigger: CATGTTGGCACAGGCATCCCACTTTGCCTTGCCCTT...TGTTGAATGAGGCAATGGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTCCATGGGGGCCAGTATaGGGAGTGGCAAGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTPWGPV*GVARAL
Trigger: TAGGGCTCTTGCCACTCCCCATACTGGCCCCCATGG...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp GTGCGGGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCCTTTGCCATGTACATGCTGATCTaGGGCAAGTTTGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: VRDWCRNYSSPFSQHSFAMYMLI*GKFVLY
Trigger: GTACAGCACAAACTTGCCCCAGATCAGCATGTACAT...GGCAAAGGAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCCCGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp TTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGGCTCACGCACATCACTaGCAACCGGGATGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: FLRLLLMCLLVCNTSPVWAHAHH*QPGWKK
Trigger: CTTTTTCCATCCCGGTTGTCAGTGATGTGCGTGAGC...CCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR TCA 90 bp GGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCCTTTGCCCCAGACAGGGTCAAAGGATGTaGCATCAACAGTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GLVQKLLVSLFTALLCPRQGQRM*HQQFLV
Trigger: AACCAGAAACTGTTGATGTCACATCCTTTGACCCTG...TCTGGGGCAAAGGAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp ATAATTTGCTGTTGTTTTGGGGGCATGGCGGCACATACCTATAGTCCTAGCTACAACTGCAGTGAGCTGTaGTTGTGCCGCTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: IICCCFGGMAAHTYSPSYNCSEL*LCRCTP
Trigger: TGGAGTGCAGCGGCACAATCACAGCTCACTGCAGTT...GTAGCTAGGACTATAGGTATGTGCCGCCATGCCCCCAAAACAACAGCAAATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR TCA 90 bp CAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAATCAGGCCAGACTATTaGGGGCATCTGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QLRPGSKDVTSTVSGFRTIRPDY*GHLAAG
Trigger: TCCTGCTGCCAGATGCCCTCAATAGTCTGGCCTGAT...TGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp ACTTCAGACATTCAAAAATACAGTAACAAGCTGGGTGTGGTAGCCCGGAATTCATCCCAGTCCTGTGCCTaGTCCCCACCGCTTCGTTCA +
Preference number: 4 (lower is better)
Translates to: TSDIQKYSNKLGVVARNSSQSCA*SPPLRS
Trigger: TGAACGAAGCGGTGGGGAGCAGGCACAGGACTGGGA...TGAATTCCGGGCTACCACACCCAGCTTGTTACTGTATTTTTGAATGTCTGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR GCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTCTGGGGGCCATCAGCTaGTCGAACACTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTLGAIS*SNTELV
Trigger: CACAAGCTCAGTGTTCGAGCAGCTGATGGCCCCCAG...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR GCA 90 bp CCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAAAACAACGTCCCCTCCTaGAAAACGCACCTCAGAACG +
Preference number: 4 (lower is better)
Translates to: PPPSSHVFASVQYLTCLENNVPS*KTHLRT
Trigger: CGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTT...TTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR GCA 90 bp TCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCAGTGCAAGGCCCTGCCTaGTCCACTTTTTCTACCTTG +
Preference number: 4 (lower is better)
Translates to: SVTSYLSLKSRGTNSFTPVQGPA*STFSTL
Trigger: CAAGGTAGAAAAAGTGGAGCAGGCAGGGCCTTGCAC...TGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCACAGCTGTGCCTCTGCTaGCAGCCAAGTCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: SVTSYLSLKSRGTNSFTPQLCLC*QPSLHL
Trigger: CAAATGAAGACTTGGCTGGCAGCAGAGGCACAGCTG...TGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCAACCATGTCACCCCTATaGGTCTTTCCCATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SVTSYLSLKSRGTNSFTPTMSPL*VFPIWA
Trigger: TGCCCAGATGGGAAAGACGCATAGGGGTGACATGGT...TGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TGTGGCTCTTTGAAACAAACCCCCGCTTCACTGGCACCATTGCCTCATTCAACACAAGGCAAAGTGGGATaGCTGTGCCAACATGAAGGT +
Preference number: 4 (lower is better)
Translates to: CGSLKQTPASLAPLPHSTQGKVG*LCQHEG
Trigger: ACCTTCATGTTGGCACAGGCATCCCACTTTGCCTTG...TGTTGAATGAGGCAATGGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp GTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCTCCAAGGGAAAGGCGAATCCCTTCTGGTTCCGCTaGATGTACATGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: VEKLNTVLPLRLSKGKANPFWFR*MYMLIW
Trigger: CCAGATCAGCATGTACATGCAGCGGAACCAGAAGGG...ATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAACTTCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCGGAAGTGCTGGCTTTTaGTCCTGCCCAGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: QTRVKGCDINSFWFQNRFGSAGF*SCPAER
Trigger: CCTTTCAGCTGGGCAGGAGCAAAAGCCAGCACTTCC...GAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp TTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAGCATCAGCAAACTCTaGTGGGTGATATCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: FLRLLLMCLLVCNTSPVWSISKL*WVISGR
Trigger: GCGGCCAGATATCACCCACCAGAGTTTGCTGATGCT...CCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR CCA 90 bp GTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCTCCAAGGGAAAGGCGAATGAAAAGCCAGGGAGGTaGAAGATCGATGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VEKLNTVLPLRLSKGKANEKPGR*KIDASS
Trigger: GCTGGAAGCATCGATCTTCCACCTCCCTGGCTTTTC...ATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAACTTCTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CTATGCGTCTTTCCCATCTGGGCAGAACCCCCTGTCGCTCACACTGACTTTGACCTAAGGAACACAGTATaGGCAATGACTACTGTGACT +
Preference number: 4 (lower is better)
Translates to: LCVFPIWAEPPVAHTDFDLRNTV*AMTTVT
Trigger: AGTCACAGTAGTCATTGCCCATACTGTGTTCCTTAG...GTCAAAGTCAGTGTGAGCGACAGGGGGTTCTGCCCAGATGGGAAAGACGCATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp TTCCTGAGCCTACTATTCATATTGCCTTATATTCACAAAGCAATGGTGCCAAGGGGACCCAGAGGCAGGTaGCGGGATGCAAGGACCAGT +
Preference number: 4 (lower is better)
Translates to: FLSLLFILPYIHKAMVPRGPRGR*RDARTS
Trigger: ACTGGTCCTTGCATCCCGCCACCTGCCTCTGGGTCC...CCTTGGCACCATTGCTTTGTGAATATAAGGCAATATGAATAGTAGGCTCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp GTGGCCTGTGCGGGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCTCTACAAGTGCATGTTaGTTTTGCTCTAGATCTGTG +
Preference number: 4 (lower is better)
Translates to: VACAGLVQKLLVSLFTALSTSAC*FCSRSV
Trigger: CACAGATCTAGAGCAAAACCAACATGCACTTGTAGA...GAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCCCGCACAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CCTCCTGCAAAACGCACCTCAGAACGTCATAAAGCCATCATGACTTTACTCTGGGGCTGCAGTGAGCTATaGTTGAGCTACTGCACTCAA +
Preference number: 4 (lower is better)
Translates to: PPAKRTSERHKAIMTLLWGCSEL*LSYCTQ
Trigger: TTGAGTGCAGTAGCTCAATCATAGCTCACTGCAGCC...CCAGAGTAAAGTCATGATGGCTTTATGACGTTCTGAGGTGCGTTTTGCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR TCA 90 bp CCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAACTCAACGTGGATGTAACTGAATaGCCGAGCCAAGCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: PSSHVFASVQYLTCLELNVDVTE*PSQAVP
Trigger: GGGGACTGCTTGGCTCGGTCATTCAGTTACATCCAC...GTTGAGTTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR TCA 90 bp CCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAAAAGTTGAAACTGCAGTaGGCTGTGATTGTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PPPSSHVFASVQYLTCLEKLKLQ*AVIVPL
Trigger: CAGCGGCACAATCACAGCTCACTGCAGTTTCAACTT...TTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR TCA 90 bp TTCCTGAGCCTACTATTCATATTGCCTTATATTCACAAAGCAATGGTGCCAAGGAAGAGAGCCCCACCCTaGGCAAGCTGGCCGCCATTA +
Preference number: 4 (lower is better)
Translates to: FLSLLFILPYIHKAMVPRKRAPP*ASWPPL
Trigger: TAATGGCGGCCAGCTTGCTCAGGGTGGGGCTCTCTT...CCTTGGCACCATTGCTTTGTGAATATAAGGCAATATGAATAGTAGGCTCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTGGACTCAGGCAGGTATaGAGTAGCCAGCCACAAGTG +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTGLRQV*SSQPQV
Trigger: CACTTGTGGCTGGCTACTTCATACCTGCCTGAGTCC...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp GTGGCCTGTGCGGGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCTTTTCTTCTCTTGACTaGTACATTTGGGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: VACAGLVQKLLVSLFTALFSSLD*YIWALL
Trigger: TAGAAGTGCCCAAATGTATCAGTCAAGAGAAGAAAA...GAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCCCGCACAGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CTGTCTTCCCAGATTGGAGGGCAGGGGTGTACCATGTCACCCCTATGCGTCTTTATAGAAATCTTTCCCTaGAACAGGAAACACTTTGGG +
Preference number: 4 (lower is better)
Translates to: LSSQIGGQGCTMSPLCVFIEIFP*NRKHFG
Trigger: CCCAAAGTGTTTCCTGTTTCAGGGAAAGATTTCTAT...AAAGACGCATAGGGGTGACATGGTACACCCCTGCCCTCCAATCTGGGAAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTAGCATCCCAGTCCTGTaGCTGCTCCCCACCGCTTCG +
Preference number: 4 (lower is better)
Translates to: IPNTLPTKANSREVKYSASIPVL*LLPTAS
Trigger: CGAAGCGGTGGGGAGCAGGCACAGGACTGGGATGCT...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CACCGTCTTAACGTTCCTGCTAACCTGGCCTGCTGCATTCTTTTTATTTTTCTCTTCTCCACGGCGGCTTaGTTCCAGGCTTTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: HRLNVPANLACCILFIFLFSTAA*FQALLF
Trigger: GAACAGCAAAGCCTGGAAGCAAGCCGCCGTGGAGAA...GAGAAAAATAAAAAGAATGCAGCAGGCCAGGTTAGCAGGAACGTTAAGACGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR GCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTAAACTCCTCTTGTCTTaGAGGTGGCCTGTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTKLLLS*RWPVRD
Trigger: GTCCCGCACAGGCCACCTGCAAGACAAGAGGAGTTT...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TGTGGCTCTTTGAAACAAACCCCCGCTTCACTGGCACCATTGCCTCATTCAACATCAGGATACCTGGTCTaGTTCCAGATGGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: CGSLKQTPASLAPLPHSTSGYLV*FQMEFL
Trigger: GAGGAATTCCATCTGGAAGCAGACCAGGTATCCTGA...TGTTGAATGAGGCAATGGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TTCCTGAGCCTACTATTCATATTGCCTTATATTCACAAAGCAATGGTGCCAAGGGAACCAAGTGGCTCGTaGGCACACGGTCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FLSLLFILPYIHKAMVPREPSGS*AHGLQL
Trigger: GAGCTGGAGACCGTGTGCGCACGAGCCACTTGGTTC...CCTTGGCACCATTGCTTTGTGAATATAAGGCAATATGAATAGTAGGCTCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp GTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCTCCAAGGGAAAGGCGAATAAAGTGGGATGCCTGTaGCAACATGAAGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: VEKLNTVLPLRLSKGKANKVGCL*QHEGVA
Trigger: AGCCACACCTTCATGTTGGCACAGGCATCCCACTTT...ATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAACTTCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CCACCCCTTCTGGTTCCGCTGCATGTACATGCTGATCTGGGGCAAGTTTGTGCTTCATTCCAAACACTTTaGCAACGAAGGCAAACAGTA +
Preference number: 4 (lower is better)
Translates to: PPLLVPLHVHADLGQVCASFQTL*QRRQTV
Trigger: TACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAATGA...AGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTGCTGGCTTTTGCTCCTaGCCAGCTGAAAGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: LPTKANSREVKYSAALEAAGFCS*PAERLE
Trigger: TTCAAGCCTTTCAGCTGGGCAGGAGCAAAAGCCAGC...AGCCTCAAGGGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACATCTGTGAGTTGTCAATaGCAGCCGTGCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: QLRPGSKDVTSTVSGFRTSVSCQ*QPCWDM
Trigger: CATGTCCCAGCACGGCTGGCATTGACAACTCACAGA...TGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGACTGGTCCACTGTCTaGTGCCCTGACTTTCCTACA +
Preference number: 4 (lower is better)
Translates to: QLRPGSKDVTSTVSGFRTDWSTV*CPDFPT
Trigger: TGTAGGAAAGTCAGGGCAGCAGACAGTGGACCAGTC...TGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp TCAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACATCAGCAAACTCTGGTaGGTGATATCTGGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: SAQTRVKGCDINSFWFQNISKLW*VISGRA
Trigger: AGCGCGGCCAGATATCACCCACCAGAGTTTGCTGAT...GTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CCA 90 bp CAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAAGCATCAGCAAACTCTaGTGGGTGATATCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: QLRPGSKDVTSTVSGFRTSISKL*WVISGR
Trigger: GCGGCCAGATATCACCCACCAGAGTTTGCTGATGCT...TGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CCA 90 bp TTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTAGCATCAGCAAACTCTaGTGGGTGATATCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: LPTKANSREVKYSAALEASISKL*WVISGR
Trigger: GCGGCCAGATATCACCCACCAGAGTTTGCTGATGCT...AGCCTCAAGGGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CTCCCAATTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCCTGGGAATTCGGGTCTaGGGATTCACTTCAATCAGA +
Preference number: 4 (lower is better)
Translates to: LPIPPPSSHVFASVQYLTLGIRV*GFTSIR
Trigger: TCTGATTGAAGTGAATCCCCAGACCCGAATTCCCAG...GGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAATTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR CCA 90 bp TTCCTGAGCCTACTATTCATATTGCCTTATATTCACAAAGCAATGGTGCCAAGGTCTCGTTGCTATTCCTaGCCCTCTGGCACGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FLSLLFILPYIHKAMVPRSRCYS*PSGTAC
Trigger: GCAGGCCGTGCCAGAGGGCCAGGAATAGCAACGAGA...CCTTGGCACCATTGCTTTGTGAATATAAGGCAATATGAATAGTAGGCTCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp TTCCTGAGCCTACTATTCATATTGCCTTATATTCACAAAGCAATGGTGCCAAGGTCTGGGGGCTACACGTaGGAACCCACCAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: FLSLLFILPYIHKAMVPRSGGYT*EPTSTP
Trigger: TGGAGTGCTGGTGGGTTCCCACGTGTAGCCCCCAGA...CCTTGGCACCATTGCTTTGTGAATATAAGGCAATATGAATAGTAGGCTCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CAA 72 bp TCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTaGGAACTCAACAACGTCCCCTCCTGCAAAACGCAC +
Preference number: 4 (lower is better)
Translates to: SHVFASVQYLTC*ELNNVPSCKTH
Trigger: GTGCGTTTTGCAGGAGGGGACGTTGTTGAGTTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
3UTR CAA 72 bp CACACACACACACACACACACACACACACACATAATTaGCTGTTGTTTTGGGGGCATGGCGGCACATACCTA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHN*LLFWGHGGTYL
Trigger: TAGGTATGTGCCGCCATGCCCCCAAAACAACAGCAAATTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR TCA 90 bp AACTCAACAACGTCCCCTCCTGCAAAACGCACCTCAGAACGTCATAAAGCCATCGTAAAAGTTGAACCATaGGGCCACAAAAGCGGTCAA +
Preference number: 4 (lower is better)
Translates to: NSTTSPPAKRTSERHKAIVKVEP*GHKSGQ
Trigger: TTGACCGCTTTTGTGGCCTCATGGTTCAACTTTTAC...GATGGCTTTATGACGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR TCA 90 bp CGTCACCGTCTTAACGTTCCTGCTAACCTGGCCTGCTGCATTCTTTTTATTTTTGCTCACGCACATCACTaGCAACCGGGATGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RHRLNVPANLACCILFIFAHAHH*QPGWKK
Trigger: CTTTTTCCATCCCGGTTGTCAGTGATGTGCGTGAGC...AAAAATAAAAAGAATGCAGCAGGCCAGGTTAGCAGGAACGTTAAGACGGTGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR TCA 90 bp CCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAAGCAGTGAGCTATGATTaGGCTACTGCACTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: PPPSSHVFASVQYLTCLEAVSYD*ATALKS
Trigger: AGACTTGAGTGCAGTAGCTCAATCATAGCTCACTGC...TTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR TCA 90 bp AGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTCTGTATACTCCACACTaGCCTTGCCATGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RPGSKDVTSTVSGFRTGSLYTPH*PCHGQR
Trigger: CCTTTGCCCATGGCAAGGTCAGTGTGGAGTATACAG...AGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTCTCAGTCACTGCTGCTaGACCAAGTGGCTCGTGCGC +
Preference number: 4 (lower is better)
Translates to: IPNTLPTKANSREVKYSALSHCC*TKWLVR
Trigger: GCGCACGAGCCACTTGGTTCAGCAGCAGTGACTGAG...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp GTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCTCCAAGGGAAAGGCGAATTTTGCTCTAGATCTGTaGGTTGTCAATGCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: VEKLNTVLPLRLSKGKANFALDL*VVNASR
Trigger: ACGGCTGGCATTGACAACTCACAGATCTAGAGCAAA...ATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAACTTCTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TGGGAGGGACTCACTGCAACCTCAAAGGTTGCAAAGGACACTCCAGGCCTGTCTAACAATATAGACTTGTaGTTGTCACAGTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: WEGLTATSKVAKDTPGLSNNIDL*LSQLSS
Trigger: GCTACTCAACTGTGACAAGCACAAGTCTATATTGTT...AGACAGGCCTGGAGTGTCCTTTGCAACCTTTGAGGTTGCAGTGAGTCCCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TCAGAACGTCATAAAGCCATCATGACTTTACTCTGGAATAGATACGATCCAGACCTGGGGGCCATCAGCTaGTCGAACACTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SERHKAIMTLLWNRYDPDLGAIS*SNTELV
Trigger: CACAAGCTCAGTGTTCGAGCAGCTGATGGCCCCCAG...GTCTGGATCGTATCTATTCCAGAGTAAAGTCATGATGGCTTTATGACGTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR GCA 90 bp TCACCTGTTTGGAACTCAACAACGTCCCCTCCTGCAAAACGCACCTCAGAACGTATGTGTTTGCTAGTGTaGAATACCTCACCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: SPVWNSTTSPPAKRTSERMCLLV*NTSPVW
Trigger: CCAAACAGGTGAGGTATTGCACACTAGCAAACACAT...ACGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTTGAGTTCCAAACAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR GCA 90 bp CGTCACCGTCTTAACGTTCCTGCTAACCTGGCCTGCTGCATTCTTTTTATTTTTCTTGCTTCCAGGCTTTaGTGTTCTCCGTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: RHRLNVPANLACCILFIFLASRL*CSPSPS
Trigger: AGACGGTGACGGAGAACAGCAAAGCCTGGAAGCAAG...AAAAATAAAAAGAATGCAGCAGGCCAGGTTAGCAGGAACGTTAAGACGGTGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR GCA 90 bp AGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTTTCCAGCTGTGCCTCTaGTGCCAGCCAAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RPGSKDVTSTVSGFRTGSFQLCL*CQPSLH
Trigger: ATGAAGACTTGGCTGGCAGCAGAGGCACAGCTGGAA...AGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp GGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTACTGAGGTGGAAGATCGATaGTTCCAGCTGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GSKDVTSTVSGFRTGSTTEVEDR*FQLCLC
Trigger: GCAGAGGCACAGCTGGAAGCATCGATCTTCCACCTC...AGTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTGCAACCTCAAAGGTTaGAAAGGACACTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QTRVKGCDINSFWFQNRFCNLKG*KGHSRP
Trigger: AGGCCTGGAGTGTCCTTTGCAACCTTTGAGGTTGCA...GAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp GCAAACTCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTGCTCCGCCTTGGGTCTaGTTTCCATCTCTAAAAGTA +
Preference number: 4 (lower is better)
Translates to: ANSVTSYLSLKSRGTNSFAPPWV*FPSLKV
Trigger: TACTTTTAGAGATGGAAAGCAGACCCAAGGCGGAGC...AAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGAGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp AGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTTGTCAATGCCAGCCGTaGTGGGACATGTTCATCAGC +
Preference number: 4 (lower is better)
Translates to: RPGSKDVTSTVSGFRTGSCQCQP*WDMFIS
Trigger: GCTGATGAACATGTCCCAGCACGGCTGGCATTGACA...AGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACATGGTCCACTGTCTGCTaGCCTGACTTTCCTACAACT +
Preference number: 4 (lower is better)
Translates to: QLRPGSKDVTSTVSGFRTWSTVC*PDFPTT
Trigger: AGTTGTAGGAAAGTCAGGGCAGCAGACAGTGGACCA...TGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CTCCGTCACCGTCTTAACGTTCCTGCTAACCTGGCCTGCTGCATTCTTTTTATTCTGGGAATTCGGGTCTaGGGATTCACTTCAATCAGA +
Preference number: 4 (lower is better)
Translates to: LRHRLNVPANLACCILFILGIRV*GFTSIR
Trigger: TCTGATTGAAGTGAATCCCCAGACCCGAATTCCCAG...AATAAAAAGAATGCAGCAGGCCAGGTTAGCAGGAACGTTAAGACGGTGACGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR CCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTAGCGGTCAAAGGTTCTaGGAATTCGGGTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTSGQRF*EFGSGD
Trigger: ATCCCCAGACCCGAATTCCCAGAACCTTTGACCGCT...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CCA 90 bp CACCGTCTTAACGTTCCTGCTAACCTGGCCTGCTGCATTCTTTTTATTTTTCTCAGCGGTCAAAGGTTCTaGGAATTCGGGTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: HRLNVPANLACCILFIFLSGQRF*EFGSGD
Trigger: ATCCCCAGACCCGAATTCCCAGAACCTTTGACCGCT...GAGAAAAATAAAAAGAATGCAGCAGGCCAGGTTAGCAGGAACGTTAAGACGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR CCA 90 bp TTCTCCCAATTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCAGTTGTTTTGGGGGCATaGCGGCACATACCTATAGTC +
Preference number: 4 (lower is better)
Translates to: FSQFLRLLLMCLLVCNTSVVLGA*RHIPIV
Trigger: GACTATAGGTATGTGCCGCCATGCCCCCAAAACAAC...TGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAATTGGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR CCA 90 bp GGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTACTCTTTGTCACCCACGCTaGAATGCAGTGGCGGGATCT +
Preference number: 4 (lower is better)
Translates to: GSKDVTSTVSGFRTGSTTLCHPR*NAVAGS
Trigger: AGATCCCGCCACTGCATTCCAGCGTGGGTGACAAAG...AGTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp GCAAACTCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTTTCACGTGGGACAAATaGCTTAAGGCAAGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: ANSVTSYLSLKSRGTNSFFTWDK*LKASEG
Trigger: GCCTTCACTTGCCTTAAGCCATTTGTCCCACGTGAA...AAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGAGTTTGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CCTCCTGCAAAACGCACCTCAGAACGTCATAAAGCCATCATGACTTTACTCTGGCAGCTGCTCGAACACTaGGCTTGTGTAAAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: PPAKRTSERHKAIMTLLWQLLEH*ACVKVE
Trigger: TTCAACTTTTACACAAGCTCAGTGTTCGAGCAGCTG...CCAGAGTAAAGTCATGATGGCTTTATGACGTTCTGAGGTGCGTTTTGCAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR TCA 90 bp GTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCTCCAAGGGAAAGGCGAATCAGCTGCTCGAACACTaGGCTTGTGTAAAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: VEKLNTVLPLRLSKGKANQLLEH*ACVKVE
Trigger: TTCAACTTTTACACAAGCTCAGTGTTCGAGCAGCTG...ATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAACTTCTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAACAGCTGCTCGAACACTaGGCTTGTGTAAAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: PPPSSHVFASVQYLTCLEQLLEH*ACVKVE
Trigger: TTCAACTTTTACACAAGCTCAGTGTTCGAGCAGCTG...TTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR TCA 90 bp TCAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACCTGTATACTCCACACTaGCCTTCAAAAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SAQTRVKGCDINSFWFQNLYTPH*PSKASG
Trigger: CCCAGAAGCTTTTGAAGGTCAGTGTGGAGTATACAG...GTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539196.2
CDS-3UTR TCA 90 bp TCAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAAAGGGGGTAGTTACTaGTGGACACCATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SAQTRVKGCDINSFWFQNKGGSY*WTPSSL
Trigger: CAGAGAAGATGGTGTCCATCAGTAACTACCCCCTTT...GTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR TCA 90 bp GGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTACTTGTCTGGTTCACCACTaGTCTCAGCATCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GSKDVTSTVSGFRTGSTTCLVHH*SQHQPQ
Trigger: CTGAGGCTGATGCTGAGATCAGTGGTGAACCAGACA...AGTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TGTGGCTCTTTGAAACAAACCCCCGCTTCACTGGCACCATTGCCTCATTCAACAACTAGCATTCCTGACTaGTCTCTTTCACAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CGSLKQTPASLAPLPHSTTSIPD*SLSQFF
Trigger: GAAGAACTGTGAAAGAGAGCAGTCAGGAATGCTAGT...TGTTGAATGAGGCAATGGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp TGTGGCTCTTTGAAACAAACCCCCGCTTCACTGGCACCATTGCCTCATTCAACATCTGGGGCAAGTTTGTaGTGTACAAATATGTCACCT +
Preference number: 4 (lower is better)
Translates to: CGSLKQTPASLAPLPHSTSGASL*CTNMSP
Trigger: AGGTGACATATTTGTACAGCACAAACTTGCCCCAGA...TGTTGAATGAGGCAATGGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp GGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTACTATCAGCAAACTCTGGTaGGTGATATCTGGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: GSKDVTSTVSGFRTGSTTISKLW*VISGRA
Trigger: AGCGCGGCCAGATATCACCCACCAGAGTTTGCTGAT...AGTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CCA 90 bp GGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTACTTCTCCAGCTCCGCCTTaGGTCTGCTTTCCATCTCTA +
Preference number: 4 (lower is better)
Translates to: GSKDVTSTVSGFRTGSTTSPAPP*VCFPSL
Trigger: TAGAGATGGAAAGCAGACCCAAGGCGGAGCTGGAGA...AGTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTAAACCCCCGCTTCACTaGCACCATTGCCTCATTCAA +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTKPPLH*HHCLIQ
Trigger: TTGAATGAGGCAATGGTGCCAGTGAAGCGGGGGTTT...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTAAGAACCACCCCTTCTaGTTCCGCTGCATGTACATG +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTKNHPF*FRCMYM
Trigger: CATGTACATGCAGCGGAACCAGAAGGGGTGGTTCTT...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp TTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTGGAGATTGTGAGACCTaGCAAGACCTTGAGATCAGT +
Preference number: 4 (lower is better)
Translates to: LPTKANSREVKYSAALEAGDCET*QDLEIS
Trigger: ACTGATCTCAAGGTCTTGCCAGGTCTCACAATCTCC...AGCCTCAAGGGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CAA 72 bp TCTGCTGCCCTGACTTTCCTACAACTCTTAAGAGGTTaGCAGTCCCCATTCCTCATAGCCAGCCATAGAAAT +
Preference number: 4 (lower is better)
Translates to: SAALTFLQLLRG*QSPFLIASHRN
Trigger: ATTTCTATGGCTGGCTATGAGGAATGGGGACTGCAAACCTCTTAAGAGTTGTAGGAAAGTCAGGGCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp TCAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACCAGCTGCTCGAACACTaGGCTTGTGTAAAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: SAQTRVKGCDINSFWFQNQLLEH*ACVKVE
Trigger: TTCAACTTTTACACAAGCTCAGTGTTCGAGCAGCTG...GTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR TCA 90 bp GTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCTCCAAGGGAAAGGCGAATACTACTGTGACTTATTaGGGCATGCTAGGAAACATC +
Preference number: 4 (lower is better)
Translates to: VEKLNTVLPLRLSKGKANTTVTY*GMLGNI
Trigger: GATGTTTCCTAGCATGCCTCAATAAGTCACAGTAGT...ATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAACTTCTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp TTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTGCCACATCTTCTTCCTaGGCCTACTATTCATATTGC +
Preference number: 4 (lower is better)
Translates to: LPTKANSREVKYSAALEAATSSS*AYYSYC
Trigger: GCAATATGAATAGTAGGCTCAGGAAGAAGATGTGGC...AGCCTCAAGGGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp AGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTATGCCTGTGCCAACATaGAGGTGTGGCTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: RPGSKDVTSTVSGFRTGSMPVPT*RCGSLK
Trigger: TTTCAAAGAGCCACACCTTCATGTTGGCACAGGCAT...AGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp TTCCTGAGCCTACTATTCATATTGCCTTATATTCACAAAGCAATGGTGCCAAGGGCTGCATGTACATGCTaGTCTGGGGCAAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: FLSLLFILPYIHKAMVPRAACTC*SGASLC
Trigger: GCACAAACTTGCCCCAGATCAGCATGTACATGCAGC...CCTTGGCACCATTGCTTTGTGAATATAAGGCAATATGAATAGTAGGCTCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTTTCATCAGCCAGCACTaGACAACCTTCGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: IPNTLPTKANSREVKYSAFISQH*TTFAGT
Trigger: TGTGCCCGCGAAGGTTGTTCAGTGCTGGCTGATGAA...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp CTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCACTGGATACTTTCTGAAGACTATGACGTaGGTGTCTACTAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSVPEVPGNKQFYTTGYFLKTMT*VSTKAA
Trigger: TGCTGCTTTAGTAGACACTCACGTCATAGTCTTCAG...AAAGTATCCAGTGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAAATGTGTTTGCTAGTGTaGAATACCTCACCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: PPPSSHVFASVQYLTCLEMCLLV*NTSPVW
Trigger: CCAAACAGGTGAGGTATTGCACACTAGCAAACACAT...TTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR GCA 90 bp TTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTACAGGCACGCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LPTKANSREVKYSAALEATGTPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGCGTGCCTGT...AGCCTCAAGGGCAGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp TCAGAACGTCATAAAGCCATCATGACTTTACTCTGGAATAGATACGATCCAGACAGCATCAGCAAACTCTaGTGGGTGATATCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SERHKAIMTLLWNRYDPDSISKL*WVISGR
Trigger: GCGGCCAGATATCACCCACCAGAGTTTGCTGATGCT...GTCTGGATCGTATCTATTCCAGAGTAAAGTCATGATGGCTTTATGACGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR CCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTCTGGGAATTCGGGTCTaGGGATTCACTTCAATCAGA +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTLGIRV*GFTSIR
Trigger: TCTGATTGAAGTGAATCCCCAGACCCGAATTCCCAG...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CCA 90 bp GGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTACTGCAAATGTACAGCCTTaGCTTCCCCAAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: GSKDVTSTVSGFRTGSTTANVQP*LPQTPQ
Trigger: CTGTGGAGTTTGGGGAAGCCAAGGCTGTACATTTGC...AGTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CCA 90 bp CCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAACTCAACAATTTGCTGTTGTTTTaGGGGCATGGCGGCACATAC +
Preference number: 4 (lower is better)
Translates to: PSSHVFASVQYLTCLELNNLLLF*GHGGTY
Trigger: GTATGTGCCGCCATGCCCCCAAAACAACAGCAAATT...GTTGAGTTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR CCA 90 bp GCAAACTCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTTTCCAAGGATTAGCCTaGCTACTAAGGAACACAGTA +
Preference number: 4 (lower is better)
Translates to: ANSVTSYLSLKSRGTNSFFQGLA*LLRNTV
Trigger: TACTGTGTTCCTTAGTAGCCAGGCTAATCCTTGGAA...AAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGAGTTTGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp TTCCTGAGCCTACTATTCATATTGCCTTATATTCACAAAGCAATGGTGCCAAGGCTCCAGCTCTGCCAATaGACTTATGTCCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: FLSLLFILPYIHKAMVPRLQLCQ*TYVLHC
Trigger: GCAGTGGAGGACATAAGTCCATTGGCAGAGCTGGAG...CCTTGGCACCATTGCTTTGTGAATATAAGGCAATATGAATAGTAGGCTCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp AGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTGCCAACATGAAGGTGTaGCTCTTTGAAACAAACCCC +
Preference number: 4 (lower is better)
Translates to: RPGSKDVTSTVSGFRTGSANMKV*LFETNP
Trigger: GGGGTTTGTTTCAAAGAGCCACACCTTCATGTTGGC...AGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp ACTCAACAACGTCCCCTCCTGCAAAACGCACCTCAGAACGTCATAAAGCCATCAGTCATAAAGCCATCATaGCTTTACTCTGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: TQQRPLLQNAPQNVIKPSVIKPS*LYSGID
Trigger: ATCTATTCCAGAGTAAAGTCATGATGGCTTTATGAC...TGATGGCTTTATGACGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR TCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTCAGGGTCAAAGGATGTaGCATCAACAGTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTQGQRM*HQQFLV
Trigger: AACCAGAAACTGTTGATGTCACATCCTTTGACCCTG...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR GCA 90 bp ACTCAACAACGTCCCCTCCTGCAAAACGCACCTCAGAACGTCATAAAGCCATCAAACAATATAGACTTGTaGTTGTCACAGTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: TQQRPLLQNAPQNVIKPSNNIDL*LSQLSS
Trigger: GCTACTCAACTGTGACAAGCACAAGTCTATATTGTT...TGATGGCTTTATGACGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR GCA 90 bp AGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTCCACAGTCTCAGTaGAGAAAGATCATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RPGSKDVTSTVSGFRTGSTPQSQ*RKIIFQ
Trigger: CTGGAAGATGATCTTTCTGCACTGAGACTGTGGAGT...AGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR GCA 90 bp CAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAAGCATGGAACCAAACTaGAAACTCTGTAACCTCCTA +
Preference number: 4 (lower is better)
Translates to: QLRPGSKDVTSTVSGFRTSMEPN*KLCNLL
Trigger: TAGGAGGTTACAGAGTTTGCAGTTTGGTTCCATGCT...TGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTATCCCTAATGCACTGTaGTTTCTTCCCTCAAGAACC +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTIPNAL*FLPSRT
Trigger: GGTTCTTGAGGGAAGAAAGCACAGTGCATTAGGGAT...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp GCAAACTCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTAGTGCATGTTGGTTTTaGTCTAGATCTGTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: ANSVTSYLSLKSRGTNSFSACWF*SRSVSC
Trigger: ACAACTCACAGATCTAGAGCAAAACCAACATGCACT...AAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGAGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp ATGACTTTACTCTGGAATAGATACGATCCAGACACCTCATCAACAAAGAATCCTAGCGGTCAAAGGTTCTaGGAATTCGGGTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: MTLLWNRYDPDTSSTKNPSGQRF*EFGSGD
Trigger: ATCCCCAGACCCGAATTCCCAGAACCTTTGACCGCT...AGGATTCTTTGTTGATGAGGTGTCTGGATCGTATCTATTCCAGAGTAAAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR CCA 90 bp GTAGAGAAGTTAAATACAGTGCTGCCCTTGAGGCTCTCCAAGGGAAAGGCGAATGACATCAACAGTTTCTaGTTTCAGAACAGGTTCTAC +
Preference number: 4 (lower is better)
Translates to: VEKLNTVLPLRLSKGKANDINSF*FQNRFY
Trigger: GTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTC...ATTCGCCTTTCCCTTGGAGAGCCTCAAGGGCAGCACTGTATTTAACTTCTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAACTCAACACGTTCCTGCTAACCTaGCCTGCTGCATTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: PSSHVFASVQYLTCLELNTFLLT*PAAFFL
Trigger: TAAAAAGAATGCAGCAGGCCAGGTTAGCAGGAACGT...GTTGAGTTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR CCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTATGCTAGGAAACATCTaGAAGGGCTATAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTMLGNI*KGYRPG
Trigger: TCCTGGTCTATAGCCCTTCCAGATGTTTCCTAGCAT...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp ATGACTTTACTCTGGAATAGATACGATCCAGACACCTCATCAACAAAGAATCCTTGCTGTGGATGTAACTaGATGACCGAGCCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: MTLLWNRYDPDTSSTKNPCCGCN*MTEPSS
Trigger: ACTGCTTGGCTCGGTCATTCAGTTACATCCACAGCA...AGGATTCTTTGTTGATGAGGTGTCTGGATCGTATCTATTCCAGAGTAAAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR TCA 90 bp TTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGGTCATAAAGCCATCATaGCTTTACTCTGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: FLRLLLMCLLVCNTSPVWVIKPS*LYSGID
Trigger: ATCTATTCCAGAGTAAAGTCATGATGGCTTTATGAC...CCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR TCA 90 bp TTCCTGAGCCTACTATTCATATTGCCTTATATTCACAAAGCAATGGTGCCAAGGGGGCTTCAATGGCTTTaGAGAAAAGGGCAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: FLSLLFILPYIHKAMVPRGLQWL*RKGQGK
Trigger: TTTGCCTTGCCCTTTTCTTCAAAGCCATTGAAGCCC...CCTTGGCACCATTGCTTTGTGAATATAAGGCAATATGAATAGTAGGCTCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTAAGGAGTATGCATTTTaGCGGGCCTGGGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: IPNTLPTKANSREVKYSAKEYAF*RAWASM
Trigger: CATTGAAGCCCAGGCCCGTCAAAATGCATACTCCTT...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CTCCGTCACCGTCTTAACGTTCCTGCTAACCTGGCCTGCTGCATTCTTTTTATTAACAATATAGACTTGTaGTTGTCACAGTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LRHRLNVPANLACCILFINNIDL*LSQLSS
Trigger: GCTACTCAACTGTGACAAGCACAAGTCTATATTGTT...AATAAAAAGAATGCAGCAGGCCAGGTTAGCAGGAACGTTAAGACGGTGACGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607161.5
3UTR CAA 72 bp TTTTCTCCAGCTACATCTTCAAACGACTCAAGTTCCTaGGAAATAAAGAACTCTCTCAGGGTCTCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: FSPATSSNDSSS*EIKNSLRVSRC
Trigger: GCAACGAGAGACCCTGAGAGAGTTCTTTATTTCCAAGGAACTTGAGTCGTTTGAAGATGTAGCTGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR TCA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTAAAGGGGGTAGTTACTaGTGGACACCATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: IPNTLPTKANSREVKYSAKGGSY*WTPSSL
Trigger: CAGAGAAGATGGTGTCCATCAGTAACTACCCCCTTT...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCAACAATATAGACTTGTaGTTGTCACAGTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QTRVKGCDINSFWFQNRFNNIDL*LSQLSS
Trigger: GCTACTCAACTGTGACAAGCACAAGTCTATATTGTT...GAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR GCA 90 bp TTCCTGAGCCTACTATTCATATTGCCTTATATTCACAAAGCAATGGTGCCAAGGACTCCACAGTCTCAGTaGAGAAAGATCATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FLSLLFILPYIHKAMVPRTPQSQ*RKIIFQ
Trigger: CTGGAAGATGATCTTTCTGCACTGAGACTGTGGAGT...CCTTGGCACCATTGCTTTGTGAATATAAGGCAATATGAATAGTAGGCTCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp CGTCACCGTCTTAACGTTCCTGCTAACCTGGCCTGCTGCATTCTTTTTATTTTTCCTGCTAACCTGGCCTaGTGCATTCTTTTTATTTTT +
Preference number: 4 (lower is better)
Translates to: RHRLNVPANLACCILFIFPANLA*CILFIF
Trigger: AAAAATAAAAAGAATGCAGCAGGCCAGGTTAGCAGG...AAAAATAAAAAGAATGCAGCAGGCCAGGTTAGCAGGAACGTTAAGACGGTGACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR CCA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTCTGGGAATTCGGGTCTaGGGATTCACTTCAATCAGA +
Preference number: 4 (lower is better)
Translates to: IPNTLPTKANSREVKYSALGIRV*GFTSIR
Trigger: TCTGATTGAAGTGAATCCCCAGACCCGAATTCCCAG...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CCA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTGACATCAACAGTTTCTaGTTTCAGAACAGGTTCTAC +
Preference number: 4 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTDINSF*FQNRFY
Trigger: GTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTC...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CCA 90 bp AGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTAAATATGTCACCTGTTaGCTGGTCACAGTAAGTAGA +
Preference number: 4 (lower is better)
Translates to: RPGSKDVTSTVSGFRTGSKYVTC*LVTVSR
Trigger: TCTACTTACTGTGACCAGCCAACAGGTGACATATTT...AGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR GCA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTCAAAACAACCAGGTTTaGAAGAACAGTATTCATAGG +
Preference number: 4 (lower is better)
Translates to: IPNTLPTKANSREVKYSAQNNQV*KNSIHR
Trigger: CCTATGAATACTGTTCTTGCAAACCTGGTTGTTTTG...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
3UTR CAA 72 bp CTGTACTTAACATTCCAAATGCTCATTCCAAACACTTaGCCAACGAAGGCAAACAGTAGAGAAGTTAAATAC +
Preference number: 4 (lower is better)
Translates to: LYLTFQMLIPNT*PTKANSREVKY
Trigger: GTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAATGAGCATTTGGAATGTTAAGTACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS GCA 90 bp CCTAGTCGGGGCCGCTTGGGTGGCAGAGCATCCCAGTCCTGTGCCTaGTCCCCACCGCTTCGTTCACGAGGCTTGAATCCATCACTGGGC +
Preference number: 5 (lower is better)
Translates to: PSRGRLGGRASQSCA*SPPLRSRGLNPSLG
Trigger: GCCCAGTGATGGATTCAAGCCTCGTGAACGAAGCGGTGGGGAGCAGGCACAGGACTGGGATGCTCTGCCACCCAAGCGGCCCCGACTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
CDS CCA 90 bp ACAGAGGCTCAAAGGGTTGTGAGCACTGTCCCTGGAGTTACCTGGTaGGTGATATCTGGCCGCGCTTCCCCAGGGTCCCGTCCATTCTTC +
Preference number: 5 (lower is better)
Translates to: TEAQRVVSTVPGVTW*VISGRASPGSRPFF
Trigger: GAAGAATGGACGGGACCCTGGGGAAGCGCGGCCAGATATCACCCACCAGGTAACTCCAGGGACAGTGCTCACAACCCTTTGAGCCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620255.1
CDS CCA 90 bp CATACAGAGGCTCAAAGGGTTGTGAGCACTGTCCCTGGAGTTACCTaGTGGGTGATATCTGGCCGCGCTTCCCCAGGGTCCCGTCCATTC +
Preference number: 5 (lower is better)
Translates to: HTEAQRVVSTVPGVT*WVISGRASPGSRPF
Trigger: GAATGGACGGGACCCTGGGGAAGCGCGGCCAGATATCACCCACCAGGTAACTCCAGGGACAGTGCTCACAACCCTTTGAGCCTCTGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620255.1
CDS CCA 90 bp CCAACCCTTCCATACAGAGGCTCAAAGGGTTGTGAGCACTGTCCCTaGAGTTACCTGGTGGGTGATATCTGGCCGCGCTTCCCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PTLPYRGSKGCEHCP*SYLVGDIWPRFPRV
Trigger: GACCCTGGGGAAGCGCGGCCAGATATCACCCACCAGGTAACTCCAGGGACAGTGCTCACAACCCTTTGAGCCTCTGTATGGAAGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620255.1
CDS-3UTR CAA 90 bp GGAACTCAACAACGTCCCCTCCTGCAAAACGCACCTCAGAACGTCATAAAGCCACCTAGTCGGGGCCGCTaGGGTGGCAGAGCATCCCAG +
Preference number: 5 (lower is better)
Translates to: GTQQRPLLQNAPQNVIKPPSRGR*GGRASQ
Trigger: CTGGGATGCTCTGCCACCCAAGCGGCCCCGACTAGG...TGGCTTTATGACGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTTGAGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR CAA 90 bp GTGGCCTGTGCGGGACTGGTGCAGAAACTACTCGTCTCCCTTTTCACAGCACTCGTCTCCAGCTCCGCCTaGGGTCTGCTTTCCATCTCT +
Preference number: 5 (lower is better)
Translates to: VACAGLVQKLLVSLFTALVSSSA*GLLSIS
Trigger: AGAGATGGAAAGCAGACCCAAGGCGGAGCTGGAGAC...GAGTGCTGTGAAAAGGGAGACGAGTAGTTTCTGCACCAGTCCCGCACAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp TTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGCCTAGTCGGGGCCGCTaGGGTGGCAGAGCATCCCAG +
Preference number: 5 (lower is better)
Translates to: FLRLLLMCLLVCNTSPVWPSRGR*GGRASQ
Trigger: CTGGGATGCTCTGCCACCCAAGCGGCCCCGACTAGG...CCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS CCA 90 bp AAGGGTTGTGAGCACTGTCCCTGGAGTTACCTGGTGGGTGATATCTaGCCGCGCTTCCCCAGGGTCCCGTCCATTCTTCAACAATATAGA +
Preference number: 5 (lower is better)
Translates to: KGCEHCPWSYLVGDI*PRFPRVPSILQQYR
Trigger: TCTATATTGTTGAAGAATGGACGGGACCCTGGGGAAGCGCGGCCAGATATCACCCACCAGGTAACTCCAGGGACAGTGCTCACAACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620255.1
CDS-3UTR CAA 90 bp TTTGCTGTTGTTTTGGGGGCATGGCGGCACATACCTATAGTCCTAGCTACTTGGCTTCGTTCACGAGGCTaGAATCCATCACTGGGCGCG +
Preference number: 5 (lower is better)
Translates to: FAVVLGAWRHIPIVLATWLRSRG*NPSLGA
Trigger: CGCGCCCAGTGATGGATTCAAGCCTCGTGAACGAAG...CCAAGTAGCTAGGACTATAGGTATGTGCCGCCATGCCCCCAAAACAACAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS GCA 90 bp GTCCTAACTGTGACTTCCAATTATGGCAGCAGCCCTCAAAGGATGTaGCCTGGGGCAGGGTGTGGAACTGTCATGTGTCTTCTAGCTCAT +
Preference number: 5 (lower is better)
Translates to: VLTVTSNYGSSPQRM*PGAGCGTVMCLLAH
Trigger: ATGAGCTAGAAGACACATGACAGTTCCACACCCTGCCCCAGGGCACATCCTTTGAGGGCTGCTGCCATAATTGGAAGTCACAGTTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611981.1
CDS-3UTR CAA 90 bp TTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAGCAAGTCGCATCTCTaGCCATGGGCAAAGGCCCCT +
Preference number: 5 (lower is better)
Translates to: FLRLLLMCLLVCNTSPVWSKSHL*PWAKAP
Trigger: AGGGGCCTTTGCCCATGGCAAGAGATGCGACTTGCT...CCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR CAA 90 bp CCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAACTTCTCCACGGCGGCTaGCTTCCAGGCTTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: PPPSSHVFASVQYLTCLELLHGG*LPGFAV
Trigger: AACAGCAAAGCCTGGAAGCAAGCCGCCGTGGAGAAG...TTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR CAA 90 bp TCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCATCGCTCACACTGACTTaGACCCCCACCTATACCCCC +
Preference number: 5 (lower is better)
Translates to: SVTSYLSLKSRGTNSFTPSLTLT*TPTYTP
Trigger: GGGGGTATAGGTGGGGGTCAAAGTCAGTGTGAGCGA...TGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp ATTCCAAACACTTTGCCAACGAAGGCAAACAGTAGAGAAGTTAAATACAGTGCTCCTAGTCGGGGCCGCTaGGGTGGCAGAGCATCCCAG +
Preference number: 5 (lower is better)
Translates to: IPNTLPTKANSREVKYSAPSRGR*GGRASQ
Trigger: CTGGGATGCTCTGCCACCCAAGCGGCCCCGACTAGG...AGCACTGTATTTAACTTCTCTACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp CTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCACTGGATACTTTCTTCGTTCACGAGGCTaGAATCCATCACTGGGCGCG +
Preference number: 5 (lower is better)
Translates to: LSVPEVPGNKQFYTTGYFLRSRG*NPSLGA
Trigger: CGCGCCCAGTGATGGATTCAAGCCTCGTGAACGAAG...AAAGTATCCAGTGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp GGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTACTCAAGGACCAGTCAGTTaGAGGGTCGCCCCACCCACC +
Preference number: 5 (lower is better)
Translates to: GSKDVTSTVSGFRTGSTTQGPVS*RVAPPT
Trigger: GGTGGGTGGGGCGACCCTCAAACTGACTGGTCCTTG...AGTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp GCAAACTCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTAATCAGGCCAGACTATaGAGGGCATCTGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ANSVTSYLSLKSRGTNSFNQARL*RASGSR
Trigger: CCTGCTGCCAGATGCCCTCAATAGTCTGGCCTGATT...AAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGAGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp CAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGAGCCGCTCCTAGCTaGCCTTATCACATCCACGTG +
Preference number: 5 (lower is better)
Translates to: QLRPGSKDVTSTVSGFRTGAAPS*PYHIHV
Trigger: CACGTGGATGTGATAAGGCAAGCTAGGAGCGGCTCC...TGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp CCACCCCTTCTGGTTCCGCTGCATGTACATGCTGATCTGGGGCAAGTTTGTGCTCAACTCTTAAGAGGTTaGCAGTCCCCATTCCTCATA +
Preference number: 5 (lower is better)
Translates to: PPLLVPLHVHADLGQVCAQLLRG*QSPFLI
Trigger: TATGAGGAATGGGGACTGCAAACCTCTTAAGAGTTG...AGCACAAACTTGCCCCAGATCAGCATGTACATGCAGCGGAACCAGAAGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS TCA 90 bp TACAGTAACAAGCTGGGTGTGGTAGCCCGGAATTCAAGGCTGCAGTaGGCTATGATTGAGCTACTGCACTCAAGTCTGGACAACAGAGCA +
Preference number: 5 (lower is better)
Translates to: YSNKLGVVARNSRLQ*AMIELLHSSLDNRA
Trigger: TGCTCTGTTGTCCAGACTTGAGTGCAGTAGCTCAATCATAGCTCACTGCAGCCTTGAATTCCGGGCTACCACACCCAGCTTGTTACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS TCA 90 bp CGTCCCCTCCTGCAAAACGCACCTCAGAACGTCATAAAGCCATCATaGCTTTACTCTGGAATAGATACGATCCAGACACCTTGCCATGGG +
Preference number: 5 (lower is better)
Translates to: RPLLQNAPQNVIKPS*LYSGIDTIQTPCHG
Trigger: CCCATGGCAAGGTGTCTGGATCGTATCTATTCCAGAGTAAAGTCATGATGGCTTTATGACGTTCTGAGGTGCGTTTTGCAGGAGGGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR CAA 90 bp CCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGAACTCAACGCTTGCTTCCAGGCTTaGCTGTTCTCCGTCACCGTC +
Preference number: 5 (lower is better)
Translates to: PSSHVFASVQYLTCLELNACFQA*LFSVTV
Trigger: GACGGTGACGGAGAACAGCAAAGCCTGGAAGCAAGC...GTTGAGTTCCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS GCA 90 bp CGCGCTTCCCCAGGGTCCCGTCCATTCTTCAACAATATAGACTTGTaGTTGTCACAGTTGAGTAGCTCATATGTCTTCCCTACCTTGACT +
Preference number: 5 (lower is better)
Translates to: RASPGSRPFFNNIDL*LSQLSSSYVFPTLT
Trigger: AGTCAAGGTAGGGAAGACATATGAGCTACTCAACTGTGACAAGCACAAGTCTATATTGTTGAAGAATGGACGGGACCCTGGGGAAGCGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261406.7
ENST00000539196.2
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
ENST00000620255.1
CDS-3UTR CAA 90 bp TCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCACAGCCCTTCTACTATTaGGTGCAACAGACCATCCAC +
Preference number: 5 (lower is better)
Translates to: SVTSYLSLKSRGTNSFTPQPFYY*VQQTIH
Trigger: GTGGATGGTCTGTTGCACCAAATAGTAGAAGGGCTG...TGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp CAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAAGACCTGGCAAGACCTaGAGATCAGTAGCATCCCTG +
Preference number: 5 (lower is better)
Translates to: QLRPGSKDVTSTVSGFRTRPGKT*RSVASL
Trigger: CAGGGATGCTACTGATCTCAAGGTCTTGCCAGGTCT...TGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS TCA 90 bp AATGTTAGGAACAAACAGTTGCCAAGCATATGGCTAGCTGTACAGTaGTGGGTTCAGACTCCCTCTTTCACTCAGCCAGGAAGCTACTGC +
Preference number: 5 (lower is better)
Translates to: NVRNKQLPSIWLAVQ*WVQTPSFTQPGSYC
Trigger: GCAGTAGCTTCCTGGCTGAGTGAAAGAGGGAGTCTGAACCCATCACTGTACAGCTAGCCATATGCTTGGCAACTGTTTGTTCCTAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611981.1
CDS-3UTR CAA 90 bp CAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAAGCAAATGTACAGCCTaGGCTTCCCCAAACTCCACA +
Preference number: 5 (lower is better)
Translates to: QLRPGSKDVTSTVSGFRTSKCTA*ASPNST
Trigger: TGTGGAGTTTGGGGAAGCCAAGGCTGTACATTTGCT...TGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CAA 90 bp CTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCACTGGATACTTTAGCAAATGTACAGCCTaGGCTTCCCCAAACTCCACA +
Preference number: 5 (lower is better)
Translates to: LSVPEVPGNKQFYTTGYFSKCTA*ASPNST
Trigger: TGTGGAGTTTGGGGAAGCCAAGGCTGTACATTTGCT...AAAGTATCCAGTGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp TTCTCCCAATTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCAACACATAATTTGCTGTaGTTTTGGGGGCATGGCGGC +
Preference number: 5 (lower is better)
Translates to: FSQFLRLLLMCLLVCNTSTHNLL*FWGHGG
Trigger: GCCGCCATGCCCCCAAAACAACAGCAAATTATGTGT...TGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAATTGGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR CAA 90 bp CAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACACAGCCAAGTCTTCATTaGGGGCCAAAGGGGAAACTT +
Preference number: 5 (lower is better)
Translates to: QLRPGSKDVTSTVSGFRTQPSLH*GPKGKL
Trigger: AAGTTTCCCCTTTGGCCCCAAATGAAGACTTGGCTG...TGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp TTCCTGAGCCTACTATTCATATTGCCTTATATTCACAAAGCAATGGTGCCAAGGCAAACTCCTCTTGTCTaGCAGGTGGCCTGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: FLSLLFILPYIHKAMVPRQTPLV*QVACAG
Trigger: TCCCGCACAGGCCACCTGCAAGACAAGAGGAGTTTG...CCTTGGCACCATTGCTTTGTGAATATAAGGCAATATGAATAGTAGGCTCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp TGTGGCTCTTTGAAACAAACCCCCGCTTCACTGGCACCATTGCCTCATTCAACACTCATTCCAAACACTTaGCCAACGAAGGCAAACAGT +
Preference number: 5 (lower is better)
Translates to: CGSLKQTPASLAPLPHSTLIPNT*PTKANS
Trigger: ACTGTTTGCCTTCGTTGGCAAAGTGTTTGGAATGAG...TGTTGAATGAGGCAATGGTGCCAGTGAAGCGGGGGTTTGTTTCAAAGAGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp CACCTGTTTGGAACTCAACAACGTCCCCTCCTGCAAAACGCACCTCAGAACGTCTTCAACAATATAGACTaGTGCTTGTCACAGTTGAGT +
Preference number: 5 (lower is better)
Translates to: HLFGTQQRPLLQNAPQNVFNNID*CLSQLS
Trigger: ACTCAACTGTGACAAGCACAAGTCTATATTGTTGAA...GACGTTCTGAGGTGCGTTTTGCAGGAGGGGACGTTGTTGAGTTCCAAACAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR CAA 90 bp TTTGCTGTTGTTTTGGGGGCATGGCGGCACATACCTATAGTCCTAGCTACTTGGACACACACACATAATTaGCTGTTGTTTTGGGGGCAT +
Preference number: 5 (lower is better)
Translates to: FAVVLGAWRHIPIVLATWTHTHN*LLFWGH
Trigger: ATGCCCCCAAAACAACAGCAAATTATGTGTGTGTGT...CCAAGTAGCTAGGACTATAGGTATGTGCCGCCATGCCCCCAAAACAACAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR CAA 90 bp GCAAACTCTGTAACCTCCTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTAACAGCTTTACTTGTTaGTCCCCACCACTAGAGTGT +
Preference number: 5 (lower is better)
Translates to: ANSVTSYLSLKSRGTNSFNSFTC*SPPLEC
Trigger: ACACTCTAGTGGTGGGGACAAACAAGTAAAGCTGTT...AAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAGGAGGTTACAGAGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp TTCCTCCGCCTTCTTCTCATGTGTTTGCTAGTGTGCAATACCTCACCTGTTTGGCTTCTTCTCATGTGTTaGCTAGTGTGCAATACCTCA +
Preference number: 5 (lower is better)
Translates to: FLRLLLMCLLVCNTSPVWLLLMC*LVCNTS
Trigger: TGAGGTATTGCACACTAGCAAACACATGAGAAGAAG...CCAAACAGGTGAGGTATTGCACACTAGCAAACACATGAGAAGAAGGCGGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261406.7
ENST00000607161.5
CDS-3UTR CAA 90 bp CTCCGTCACCGTCTTAACGTTCCTGCTAACCTGGCCTGCTGCATTCTTTTTATTCTTCTTCTCATGTGTTaGCTAGTGTGCAATACCTCA +
Preference number: 5 (lower is better)
Translates to: LRHRLNVPANLACCILFILLLMC*LVCNTS
Trigger: TGAGGTATTGCACACTAGCAAACACATGAGAAGAAG...AATAAAAAGAATGCAGCAGGCCAGGTTAGCAGGAACGTTAAGACGGTGACGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS CCA 90 bp GACTCCCTCTTTCACTCAGCCAGGAAGCTACTGCAAGAACAGGAGTaGAGTTTCCACAAACATAGAAAAATAATAACAGTCCTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: DSLFHSARKLLQEQE*SFHKHRKIITVLVL
Trigger: CAGGACAAGGACTGTTATTATTTTTCTATGTTTGTGGAAACTCCACTCCTGTTCTTGCAGTAGCTTCCTGGCTGAGTGAAAGAGGGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611981.1
CDS-3UTR CAA 90 bp CTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCACTGGATACTTTGACTACTGTGACTTATaGAGGCATGCTAGGAAACAT +
Preference number: 5 (lower is better)
Translates to: LSVPEVPGNKQFYTTGYFDYCDL*RHARKH
Trigger: ATGTTTCCTAGCATGCCTCAATAAGTCACAGTAGTC...AAAGTATCCAGTGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp GGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTACTGCTTCACTGGCACCATaGCCTCATTCAACATCAACA +
Preference number: 5 (lower is better)
Translates to: GSKDVTSTVSGFRTGSTTASLAP*PHSTST
Trigger: TGTTGATGTTGAATGAGGCAATGGTGCCAGTGAAGC...AGTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp TTCCTGAGCCTACTATTCATATTGCCTTATATTCACAAAGCAATGGTGCCAAGGGAAGGAGTATGCATTTaGACGGGCCTGGGCTTCAAT +
Preference number: 5 (lower is better)
Translates to: FLSLLFILPYIHKAMVPREGVCI*TGLGFN
Trigger: ATTGAAGCCCAGGCCCGTCAAAATGCATACTCCTTC...CCTTGGCACCATTGCTTTGTGAATATAAGGCAATATGAATAGTAGGCTCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp TCAGCTCAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAATATAGACTTGTGCTaGTCACAGTTGAGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: SAQTRVKGCDINSFWFQNNIDLC*SQLSSS
Trigger: TGAGCTACTCAACTGTGACAAGCACAAGTCTATATT...GTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CAA 90 bp CAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCAATATAGACTTGTGCTaGTCACAGTTGAGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: QTRVKGCDINSFWFQNRFNIDLC*SQLSSS
Trigger: TGAGCTACTCAACTGTGACAAGCACAAGTCTATATT...GAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CAA 90 bp ACACACATAATTTGCTGTTGTTTTGGGGGCATGGCGGCACATACCTATAGTCCTAATATAGACTTGTGCTaGTCACAGTTGAGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: THIICCCFGGMAAHTYSPNIDLC*SQLSSS
Trigger: TGAGCTACTCAACTGTGACAAGCACAAGTCTATATT...AGGACTATAGGTATGTGCCGCCATGCCCCCAAAACAACAGCAAATTATGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR CAA 90 bp GGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTACTTTGTGCTTGTCACAGTaGAGTAGCTCATATGTCTTC +
Preference number: 5 (lower is better)
Translates to: GSKDVTSTVSGFRTGSTTLCLSQ*SSSYVF
Trigger: GAAGACATATGAGCTACTCAACTGTGACAAGCACAA...AGTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CAA 90 bp CTATCTGTCCCTGAAGTCCCGGGGAACAAACAGTTTTACACCACTGGATACTTTTTCAACAATATAGACTaGTGCTTGTCACAGTTGAGT +
Preference number: 5 (lower is better)
Translates to: LSVPEVPGNKQFYTTGYFFNNID*CLSQLS
Trigger: ACTCAACTGTGACAAGCACAAGTCTATATTGTTGAA...AAAGTATCCAGTGGTGTAAAACTGTTTGTTCCCCGGGACTTCAGGGACAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599672.6
CDS-3UTR CAA 90 bp ACACACATAATTTGCTGTTGTTTTGGGGGCATGGCGGCACATACCTATAGTCCTTTCAACAATATAGACTaGTGCTTGTCACAGTTGAGT +
Preference number: 5 (lower is better)
Translates to: THIICCCFGGMAAHTYSPFNNID*CLSQLS
Trigger: ACTCAACTGTGACAAGCACAAGTCTATATTGTTGAA...AGGACTATAGGTATGTGCCGCCATGCCCCCAAAACAACAGCAAATTATGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS-3UTR CAA 90 bp CCAGGGTCAAAGGATGTGACATCAACAGTTTCTGGTTTCAGAACAGGTTCTACTTTCAACAATATAGACTaGTGCTTGTCACAGTTGAGT +
Preference number: 5 (lower is better)
Translates to: PGSKDVTSTVSGFRTGSTFNNID*CLSQLS
Trigger: ACTCAACTGTGACAAGCACAAGTCTATATTGTTGAA...AGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS-3UTR CAA 90 bp ATGACTTTACTCTGGAATAGATACGATCCAGACACCTCATCAACAAAGAATCCTTTGTGCTTGTCACAGTaGAGTAGCTCATATGTCTTC +
Preference number: 5 (lower is better)
Translates to: MTLLWNRYDPDTSSTKNPLCLSQ*SSSYVF
Trigger: GAAGACATATGAGCTACTCAACTGTGACAAGCACAA...AGGATTCTTTGTTGATGAGGTGTCTGGATCGTATCTATTCCAGAGTAAAGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS-3UTR CAA 90 bp TCAGAACGTCATAAAGCCATCATGACTTTACTCTGGAATAGATACGATCCAGACAATATAGACTTGTGCTaGTCACAGTTGAGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: SERHKAIMTLLWNRYDPDNIDLC*SQLSSS
Trigger: TGAGCTACTCAACTGTGACAAGCACAAGTCTATATT...GTCTGGATCGTATCTATTCCAGAGTAAAGTCATGATGGCTTTATGACGTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261406.7
CDS CCA 72 bp CTCCGATCTTGTTTCCTGCCCCTAGTCGGGGCCGCTTaGGTGGCAGAGCATCCCAGTCCTGTGCCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: LRSCFLPLVGAA*VAEHPSPVPAP
Trigger: GGGAGCAGGCACAGGACTGGGATGCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAAGATCGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261406.7
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
ENST00000620255.1
CDS CAA 72 bp CCTCCGATCTTGTTTCCTGCCCCTAGTCGGGGCCGCTaGGGTGGCAGAGCATCCCAGTCCTGTGCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: PPILFPAPSRGR*GGRASQSCACS
Trigger: GGAGCAGGCACAGGACTGGGATGCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAAGATCGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261406.7
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
ENST00000620255.1
CDS CAA 72 bp CCTTCCAGCACCACAATAAGCCTACGGCCTCCGATCTaGTTTCCTGCCCCTAGTCGGGGCCGCTTGGGTGGC +
Preference number: 6 (lower is better)
Translates to: PSSTTISLRPPI*FPAPSRGRLGG
Trigger: GCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAAGATCGGAGGCCGTAGGCTTATTGTGGTGCTGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261406.7
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
ENST00000620255.1
CDS CCA 72 bp CAAAGGGTTGTGAGCACTGTCCCTGGAGTTACCTGGTaGGTGATATCTGGCCGCGCTTCCCCAGGGTCCCGT +
Preference number: 6 (lower is better)
Translates to: QRVVSTVPGVTW*VISGRASPGSR
Trigger: ACGGGACCCTGGGGAAGCGCGGCCAGATATCACCCACCAGGTAACTCCAGGGACAGTGCTCACAACCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620255.1
CDS CCA 72 bp GAGCACTGTCCCTGGAGTTACCTGGTGGGTGATATCTaGCCGCGCTTCCCCAGGGTCCCGTCCATTCTTCAA +
Preference number: 6 (lower is better)
Translates to: EHCPWSYLVGDI*PRFPRVPSILQ
Trigger: TTGAAGAATGGACGGGACCCTGGGGAAGCGCGGCCAGATATCACCCACCAGGTAACTCCAGGGACAGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620255.1
CDS CCA 72 bp ATCCATCAGCATCAGCAAACTCTGGTGGGTGATATCTaGCCGCGCTTCCCCAGGGTCCCGTCCATTCTTCAA +
Preference number: 6 (lower is better)
Translates to: IHQHQQTLVGDI*PRFPRVPSILQ
Trigger: TTGAAGAATGGACGGGACCCTGGGGAAGCGCGGCCAGATATCACCCACCAGAGTTTGCTGATGCTGATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261406.7
ENST00000539196.2
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
CDS GCA 72 bp GTGACTTCCAATTATGGCAGCAGCCCTCAAAGGATGTaGCCTGGGGCAGGGTGTGGAACTGTCATGTGTCTT +
Preference number: 6 (lower is better)
Translates to: VTSNYGSSPQRM*PGAGCGTVMCL
Trigger: AAGACACATGACAGTTCCACACCCTGCCCCAGGGCACATCCTTTGAGGGCTGCTGCCATAATTGGAAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611981.1
CDS CCA 72 bp AAGGATGAAGAAGGTCCTAACTGTGACTTCCAATTATaGCAGCAGCCCTCAAAGGATGTGCCCTGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: KDEEGPNCDFQL*QQPSKDVPWGR
Trigger: CCTGCCCCAGGGCACATCCTTTGAGGGCTGCTGCCATAATTGGAAGTCACAGTTAGGACCTTCTTCATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611981.1
CDS CAA 90 bp GGCCGCGCTTCCCCAGGGTCCCGTCCATTCTTCAACAATATAGACTaGTGCTTGTCACAGTTGAGTAGCTCATATGTCTTCCCTACCTTG +
Preference number: 6 (lower is better)
Translates to: GRASPGSRPFFNNID*CLSQLSSSYVFPTL
Trigger: CAAGGTAGGGAAGACATATGAGCTACTCAACTGTGACAAGCACAAGTCTATATTGTTGAAGAATGGACGGGACCCTGGGGAAGCGCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261406.7
ENST00000539196.2
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
ENST00000620255.1
CDS CAA 90 bp TCTGGGAATTCTATACTAAGTTCAGCTCTACCAAGAATTTCAGGGTaGAGCCCAGACCTTACCTTGCCATGGGCAAAGGCCCCTACCACA +
Preference number: 6 (lower is better)
Translates to: SGNSILSSALPRISG*SPDLTLPWAKAPTT
Trigger: TGTGGTAGGGGCCTTTGCCCATGGCAAGGTAAGGTCTGGGCTCAACCCTGAAATTCTTGGTAGAGCTGAACTTAGTATAGAATTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611981.1
CDS TCA 72 bp AACAAACAGTTGCCAAGCATATGGCTAGCTGTACAGTaGTGGGTTCAGACTCCCTCTTTCACTCAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: NKQLPSIWLAVQ*WVQTPSFTQPG
Trigger: TCCTGGCTGAGTGAAAGAGGGAGTCTGAACCCATCACTGTACAGCTAGCCATATGCTTGGCAACTGTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611981.1
CDS CAA 72 bp TCTATACTAAGTTCAGCTCTACCAAGAATTTCAGGGTaGAGCCCAGACCTTACCTTGCCATGGGCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: SILSSALPRISG*SPDLTLPWAKA
Trigger: GGCCTTTGCCCATGGCAAGGTAAGGTCTGGGCTCAACCCTGAAATTCTTGGTAGAGCTGAACTTAGTATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611981.1
CDS CAA 90 bp GCTTCCCCAGGGTCCCGTCCATTCTTCAACAATATAGACTTGTGCTaGTCACAGTTGAGTAGCTCATATGTCTTCCCTACCTTGACTGTC +
Preference number: 6 (lower is better)
Translates to: ASPGSRPFFNNIDLC*SQLSSSYVFPTLTV
Trigger: GACAGTCAAGGTAGGGAAGACATATGAGCTACTCAACTGTGACAAGCACAAGTCTATATTGTTGAAGAATGGACGGGACCCTGGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261406.7
ENST00000539196.2
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
ENST00000620255.1
CDS CAA 90 bp GGGTCCCGTCCATTCTTCAACAATATAGACTTGTGCTTGTCACAGTaGAGTAGCTCATATGTCTTCCCTACCTTGACTGTCTCCAGACTG +
Preference number: 6 (lower is better)
Translates to: GSRPFFNNIDLCLSQ*SSSYVFPTLTVSRL
Trigger: CAGTCTGGAGACAGTCAAGGTAGGGAAGACATATGAGCTACTCAACTGTGACAAGCACAAGTCTATATTGTTGAAGAATGGACGGGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261406.7
ENST00000539196.2
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
ENST00000620255.1
CDS GCA 72 bp CCAGGGTCCCGTCCATTCTTCAACAATATAGACTTGTaGTTGTCACAGTTGAGTAGCTCATATGTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: PGSRPFFNNIDL*LSQLSSSYVFP
Trigger: AGGGAAGACATATGAGCTACTCAACTGTGACAAGCACAAGTCTATATTGTTGAAGAATGGACGGGACCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261406.7
ENST00000539196.2
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
ENST00000620255.1
CDS CCA 72 bp ACCTCAGAACGTCATAAAGCCATCATGACTTTACTCTaGAATAGATACGATCCAGACACCTTGCCATGGGCA +
Preference number: 6 (lower is better)
Translates to: TSERHKAIMTLL*NRYDPDTLPWA
Trigger: TGCCCATGGCAAGGTGTCTGGATCGTATCTATTCCAGAGTAAAGTCATGATGGCTTTATGACGTTCTGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607161.5
CDS CAA 72 bp GGGTCCCGTCCATTCTTCAACAATATAGACTTGTGCTaGTCACAGTTGAGTAGCTCATATGTCTTCCCTACC +
Preference number: 6 (lower is better)
Translates to: GSRPFFNNIDLC*SQLSSSYVFPT
Trigger: GGTAGGGAAGACATATGAGCTACTCAACTGTGACAAGCACAAGTCTATATTGTTGAAGAATGGACGGGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261406.7
ENST00000539196.2
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
ENST00000620255.1
CDS CAA 72 bp TCCCCAGGGTCCCGTCCATTCTTCAACAATATAGACTaGTGCTTGTCACAGTTGAGTAGCTCATATGTCTTC +
Preference number: 6 (lower is better)
Translates to: SPGSRPFFNNID*CLSQLSSSYVF
Trigger: GAAGACATATGAGCTACTCAACTGTGACAAGCACAAGTCTATATTGTTGAAGAATGGACGGGACCCTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261406.7
ENST00000539196.2
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
ENST00000620255.1
CDS CCA 72 bp CAGACCAGGGTCAAAGGATGTGACATCAACAGTTTCTaGTTTCAGAACAGGTTCTACTACTGTCAAATGACC +
Preference number: 6 (lower is better)
Translates to: QTRVKGCDINSF*FQNRFYYCQMT
Trigger: GGTCATTTGACAGTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTTGACCCTGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539196.2
ENST00000599672.6
CDS CAA 72 bp CCATTCTTCAACAATATAGACTTGTGCTTGTCACAGTaGAGTAGCTCATATGTCTTCCCTACCTTGACTGTC +
Preference number: 6 (lower is better)
Translates to: PFFNNIDLCLSQ*SSSYVFPTLTV
Trigger: GACAGTCAAGGTAGGGAAGACATATGAGCTACTCAACTGTGACAAGCACAAGTCTATATTGTTGAAGAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261406.7
ENST00000539196.2
ENST00000599672.6
ENST00000607161.5
ENST00000611981.1
ENST00000620255.1