RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EME2 (Homo sapiens)

Ensembl gene IDs: ENSG00000197774

Ensembl transcript IDs: ENST00000561564.5, ENST00000561903.6, ENST00000564182.1, ENST00000565326.1, ENST00000568449.6, ENST00000568449.7, ENST00000570069.5

Found 663 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGCCACTTCCCTCCAGTACCTGTGCTGCCACCGCCTGCGCCAGCTaGGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGC +
Preference number: 1 (lower is better)
Translates to: APLPSSTCAATACAS*GQTRETRWRVCRCR
Trigger: GCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGCGGTGGCAGCACAGGTACTGGAGGGAAGTGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp GCTGCCACCGCCTGCGCCAGCTGCGGCCAGACTCGGGAGACACGCTaGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACA +
Preference number: 1 (lower is better)
Translates to: AATACASCGQTRETR*RVCRCRRASSRCYT
Trigger: TGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGCGGTGGCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR TCA 90 bp TGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCACTTTaGGTGGGTCCGTGGCCCAGCCTGGAAGCTCAGGGCTGGGAGTGC +
Preference number: 1 (lower is better)
Translates to: WSPGWAPVRPLQSPL*VGPWPSLEAQGWEC
Trigger: GCACTCCCAGCCCTGAGCTTCCAGGCTGGGCCACGGACCCACTCAAAGTGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR GCA 90 bp GCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGGCAGGGACTaGCGCTGCGGAGAGGAAGACGAGTGTGAGCGTGGGGCCCAGCCC +
Preference number: 1 (lower is better)
Translates to: ASFCSSLHSAHRGRD*RCGEEDECERGAQP
Trigger: GGGCTGGGCCCCACGCTCACACTCGTCTTCCTCTCCGCAGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 90 bp GCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTaGCGCCGGGCCTCAAGCAGGTGCTACACAACAAGCTGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: ASCGQTRETRWRVCR*RRASSRCYTTSWAG
Trigger: CCCAGCCCAGCTTGTTGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp GCCTGCGCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTaGCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAACAAGCTGG +
Preference number: 1 (lower is better)
Translates to: ACASCGQTRETRWRV*RCRRASSRCYTTSW
Trigger: CCAGCTTGTTGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp GTCACCCGCTCCTGTGCCAGCGCCACTTCCCTCCAGTACCTGTGCTaGCACCGCCTGCGCCAGCTGCGGCCAGACTCGGGAGACACGCTG +
Preference number: 1 (lower is better)
Translates to: VTRSCASATSLQYLC*HRLRQLRPDSGDTL
Trigger: CAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGCGGTGGCAGCACAGGTACTGGAGGGAAGTGGCGCTGGCACAGGAGCGGGTGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp GTGCTCCACGGCGGCCCGGAGCAGCATGAAGGTCACCCGCTCCTGTaGCAGCGCCACTTCCCTCCAGTACCTGTGCTGCCACCGCCTGCG +
Preference number: 1 (lower is better)
Translates to: VLHGGPEQHEGHPLL*QRHFPPVPVLPPPA
Trigger: CGCAGGCGGTGGCAGCACAGGTACTGGAGGGAAGTGGCGCTGGCACAGGAGCGGGTGACCTTCATGCTGCTCCGGGCCGCCGTGGAGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp AGGTACGGGCTCCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTaGGGCCCCTGCAGTCCCCACTTTGAGTGGGTCCGTGGCCCAGCC +
Preference number: 1 (lower is better)
Translates to: RYGLLKRSGALAGHR*GPCSPHFEWVRGPA
Trigger: GGCTGGGCCACGGACCCACTCAAAGTGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGGAGCCCGTACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 90 bp TGCTGTGCTGGGTGGGGAAGCGGCTGCCCTGAGCCCCAGGTCTTGTaGGAGGCTGCGAGGACGAGAGCCTGGCTGGAGCCCGCGTTGCTG +
Preference number: 1 (lower is better)
Translates to: CCAGWGSGCPEPQVL*EAARTRAWLEPALL
Trigger: CAGCAACGCGGGCTCCAGCCAGGCTCTCGTCCTCGCAGCCTCCCACAAGACCTGGGGCTCAGGGCAGCCGCTTCCCCACCCAGCACAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR TCA 90 bp AGGGACTGCCGCCGATGGTGTGCTCCACGGCGGCCCGGAGCAGCATaGAGGTCACCCGCTCCTGTGCCAGCGCCACTTCCCTCCAGTACC +
Preference number: 1 (lower is better)
Translates to: RDCRRWCAPRRPGAA*RSPAPVPAPLPSST
Trigger: GGTACTGGAGGGAAGTGGCGCTGGCACAGGAGCGGGTGACCTTCATGCTGCTCCGGGCCGCCGTGGAGCACACCATCGGCGGCAGTCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR TCA 90 bp CGGAGCCCGTTGGGAGGGAGCCTGGGCTGTGCGCTCGGGGTACTGTaGAGTCCCTGGAGGCCTGGACCCCCATCCTTTCCTGGGTGGGTC +
Preference number: 1 (lower is better)
Translates to: RSPLGGSLGCALGVL*SPWRPGPPSFPGWV
Trigger: GACCCACCCAGGAAAGGATGGGGGTCCAGGCCTCCAGGGACTTCACAGTACCCCGAGCGCACAGCCCAGGCTCCCTCCCAACGGGCTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp AAGGTCACCCGCTCCTGTGCCAGCGCCACTTCCCTCCAGTACCTGTaGTGCCACCGCCTGCGCCAGCTGCGGCCAGACTCGGGAGACACG +
Preference number: 1 (lower is better)
Translates to: KVTRSCASATSLQYL*CHRLRQLRPDSGDT
Trigger: CGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGCGGTGGCAGCACAGGTACTGGAGGGAAGTGGCGCTGGCACAGGAGCGGGTGACCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp CTCCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTaGAGTCCCCACTTTGAGTGGGTCCGTGGCCCAGCCTGGAAGCTC +
Preference number: 1 (lower is better)
Translates to: LLKRSGALAGHRCGP*SPHFEWVRGPAWKL
Trigger: GAGCTTCCAGGCTGGGCCACGGACCCACTCAAAGTGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 90 bp GTCTACGGCACCGACATGGTAAGTTGCTTCGGCCCAGGGTGCTTCTaGGGAACCTGGCTCCGGCAGCCCAGCCCCGCGCCCTCTGCCTGG +
Preference number: 1 (lower is better)
Translates to: VYGTDMVSCFGPGCF*GTWLRQPSPAPSAW
Trigger: CCAGGCAGAGGGCGCGGGGCTGGGCTGCCGGAGCCAGGTTCCCCAGAAGCACCCTGGGCCGAAGCAACTTACCATGTCGGTGCCGTAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR TCA 90 bp AGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCTaGCTGACTTCCCAGTGGAACTGCCTTCTTGGGCTGGGACAGCCC +
Preference number: 1 (lower is better)
Translates to: SREPRPCQRKRCRRT*LTSQWNCLLGLGQP
Trigger: GGGCTGTCCCAGCCCAAGAAGGCAGTTCCACTGGGAAGTCAGTCAGGTCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR TCA 90 bp CCGAGTACTCCACGCTGCCGCCATCCATCCCCAGTGCGGTGCCCGTaGCCGGCGAGTCCTTCTGTGACTGTGCTGGGCAGAGCGAGGCCT +
Preference number: 1 (lower is better)
Translates to: PSTPRCRHPSPVRCP*PASPSVTVLGRARP
Trigger: AGGCCTCGCTCTGCCCAGCACAGTCACAGAAGGACTCGCCGGTCACGGGCACCGCACTGGGGATGGATGGCGGCAGCGTGGAGTACTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp TCTGTGACTGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTaGACTCGGCCCACCGGGGCAGGGACTGCCGCCGATGGTGTGCTC +
Preference number: 1 (lower is better)
Translates to: SVTVLGRARPPSVAA*TRPTGAGTAADGVL
Trigger: GAGCACACCATCGGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACAGTCACAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR GCA 90 bp CGCGGGCGTGTCCACAGGCCAGGCCAGTGTCTGACACACGCATGCTaGTTGTCCTCTGTCACCATGGGCCGTGTCCTTCCGGGGCGGCTG +
Preference number: 1 (lower is better)
Translates to: RGRVHRPGQCLTHAC*LSSVTMGRVLPGRL
Trigger: CAGCCGCCCCGGAAGGACACGGCCCATGGTGACAGAGGACAAGCAGCATGCGTGTGTCAGACACTGGCCTGGCCTGTGGACACGCCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp GGACGCGGGCGTGTCCACAGGCCAGGCCAGTGTCTGACACACGCATaGTGCTTGTCCTCTGTCACCATGGGCCGTGTCCTTCCGGGGCGG +
Preference number: 1 (lower is better)
Translates to: GRGRVHRPGQCLTHA*CLSSVTMGRVLPGR
Trigger: CCGCCCCGGAAGGACACGGCCCATGGTGACAGAGGACAAGCAGCATGCGTGTGTCAGACACTGGCCTGGCCTGTGGACACGCCCGCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp TCTCCCGTCTACGGCACCGACATGGTAAGTTGCTTCGGCCCAGGGTaGTTCTGGGGAACCTGGCTCCGGCAGCCCAGCCCCGCGCCCTCT +
Preference number: 1 (lower is better)
Translates to: SPVYGTDMVSCFGPG*FWGTWLRQPSPAPS
Trigger: AGAGGGCGCGGGGCTGGGCTGCCGGAGCCAGGTTCCCCAGAAGCACCCTGGGCCGAAGCAACTTACCATGTCGGTGCCGTAGACGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 90 bp TCTGTGACTGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTaGACTCGGCCCACCGGGGCAGGGACTGCCGCTGCGGAGAGGAAG +
Preference number: 1 (lower is better)
Translates to: SVTVLGRARPPSVAA*TRPTGAGTAAAERK
Trigger: CTTCCTCTCCGCAGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACAGTCACAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CCA 90 bp GGTCATGCAGAATGGGGCAGAGCCGGAGCCCGTTGGGAGGGAGCCTaGGCTGTGCGCTCGGGGTACTGTGAAGTCCCTGGAGGCCTGGAC +
Preference number: 1 (lower is better)
Translates to: GHAEWGRAGARWEGA*AVRSGYCEVPGGLD
Trigger: GTCCAGGCCTCCAGGGACTTCACAGTACCCCGAGCGCACAGCCCAGGCTCCCTCCCAACGGGCTCCGGCTCTGCCCCATTCTGCATGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp CGCCTCCAGCTCCTGCAGGTCACATGCCTGAGCCTCACAGGCTCGTaGCTGTGGGATGCAGGCGTGCCTGCGGGCTCGGCAGTGTTCGAC +
Preference number: 1 (lower is better)
Translates to: RLQLLQVTCLSLTGS*LWDAGVPAGSAVFD
Trigger: GTCGAACACTGCCGAGCCCGCAGGCACGCCTGCATCCCACAGCCACGAGCCTGTGAGGCTCAGGCATGTGACCTGCAGGAGCTGGAGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR TCA 90 bp GCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCTGACTaGCTTCCCAGTGGAACTGCCTTCTTGGGCTGGGACAGCCCCTTT +
Preference number: 1 (lower is better)
Translates to: ASLGPARGSAAAGPD*LPSGTAFLGWDSPF
Trigger: AAAGGGGCTGTCCCAGCCCAAGAAGGCAGTTCCACTGGGAAGTCAGTCAGGTCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp TCCAGGGCGGAGTTGGATGAGGCCCGTCCGGAGGGAGCCATCTCTTaGTCCCGAGGCTGGGACAGTCCTTTCTGTGGGGGCTCTAGGGCC +
Preference number: 1 (lower is better)
Translates to: SRAELDEARPEGAIS*SRGWDSPFCGGSRA
Trigger: GGCCCTAGAGCCCCCACAGAAAGGACTGTCCCAGCCTCGGGAGCAAGAGATGGCTCCCTCCGGACGGGCCTCATCCAACTCCGCCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp CCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAACAAGCTGGGCTaGGTCCTGAGCATGAGTTGCAGCCGCCGCAAGGCTCCAGTGTCC +
Preference number: 1 (lower is better)
Translates to: PLPPGLKQVLHNKLG*VLSMSCSRRKAPVS
Trigger: GGACACTGGAGCCTTGCGGCGGCTGCAACTCATGCTCAGGACCCAGCCCAGCTTGTTGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR TCA 90 bp TCCTCTGTCACCATGGGCCGTGTCCTTCCGGGGCGGCTGCTTGTGTaGCCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTGCTG +
Preference number: 1 (lower is better)
Translates to: SSVTMGRVLPGRLLV*PGAALCCHSSPALL
Trigger: CAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGTCACACAAGCAGCCGCCCCGGAAGGACACGGCCCATGGTGACAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR TCA 90 bp CCTGGACAAATACCGCCACACGTTCTGCAGCCTGCTGGGCAGGGATaGGGACAGCTGGGGCCTCTCCTACACGGGTGCGTGAGGCCCAGG +
Preference number: 1 (lower is better)
Translates to: PGQIPPHVLQPAGQG*GQLGPLLHGCVRPR
Trigger: CCTGGGCCTCACGCACCCGTGTAGGAGAGGCCCCAGCTGTCCTCATCCCTGCCCAGCAGGCTGCAGAACGTGTGGCGGTATTTGTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CCA 90 bp TTGGATGAGGCCCGTCCGGAGGGAGCCATCTCTTGCTCCCGAGGCTaGGACAGTCCTTTCTGTGGGGGCTCTAGGGCCCCTCTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: LDEARPEGAISCSRG*DSPFCGGSRAPLLL
Trigger: CAGCAGCAGAGGGGCCCTAGAGCCCCCACAGAAAGGACTGTCCCAGCCTCGGGAGCAAGAGATGGCTCCCTCCGGACGGGCCTCATCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp TGTCACCATGGGCCGTGTCCTTCCGGGGCGGCTGCTTGTGTGACCTaGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTGCTGTTCCG +
Preference number: 1 (lower is better)
Translates to: CHHGPCPSGAAACVT*CCSLLSQLPCAAVP
Trigger: CGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGTCACACAAGCAGCCGCCCCGGAAGGACACGGCCCATGGTGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR TCA 90 bp AGAGATTCTACCCGATGGTGTGCTCCACGGCGGCCCGGAGCAGCATaGAGGTCACCCGCTCCTGTGCCAGCGCCACTTCCCTCCAGTACC +
Preference number: 1 (lower is better)
Translates to: RDSTRWCAPRRPGAA*RSPAPVPAPLPSST
Trigger: GGTACTGGAGGGAAGTGGCGCTGGCACAGGAGCGGGTGACCTTCATGCTGCTCCGGGCCGCCGTGGAGCACACCATCGGGTAGAATCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 90 bp GTGGCTTCAGTCTTTCTCCTTCTCCAGGGAACCCGGCCCTGGGCCTaGAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGG +
Preference number: 1 (lower is better)
Translates to: VASVFLLLQGTRPWA*SAGAQFCARAPDSG
Trigger: CCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGCCCAGGGCCGGGTTCCCTGGAGAAGGAGAAAGACTGAAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp GCTGCTTGTCCTCTGTCACCATGGGCCGTGTCCTTCCGGGGCGGCTaGTTGTGTGACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTG +
Preference number: 1 (lower is better)
Translates to: AACPLSPWAVSFRGG*LCDLVLLSAVTAPL
Trigger: CAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGTCACACAAGCAGCCGCCCCGGAAGGACACGGCCCATGGTGACAGAGGACAAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp GGTTCAGGCTGGGCCCCTCCCTTCCAGGTGTGGCAGCCACCAAGCTaGAGAACAAGAGATTCTACCCGATGGTGTGCTCCACGGCGGCCC +
Preference number: 1 (lower is better)
Translates to: GSGWAPPFQVWQPPS*RTRDSTRWCAPRRP
Trigger: GGGCCGCCGTGGAGCACACCATCGGGTAGAATCTCTTGTTCTGCAGCTTGGTGGCTGCCACACCTGGAAGGGAGGGGCCCAGCCTGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 90 bp CTGAGCTGTGACAACCGTAAGGTCAGCTTCCACATGGAGTACAGCTaGGGCACAGCGGCCATCCGGGGCACCAAGGAGCTGGGGGAGGGC +
Preference number: 1 (lower is better)
Translates to: LSCDNRKVSFHMEYS*GTAAIRGTKELGEG
Trigger: GCCCTCCCCCAGCTCCTTGGTGCCCCGGATGGCCGCTGTGCCGCAGCTGTACTCCATGTGGAAGCTGACCTTACGGTTGTCACAGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CCA 90 bp CAGCTCCTGCAGGTCACATGCCTGAGCCTCACAGGCTCGTGGCTGTaGGATGCAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGT +
Preference number: 1 (lower is better)
Translates to: QLLQVTCLSLTGSWL*DAGVPAGSAVFDTC
Trigger: ACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTGCATCCCACAGCCACGAGCCTGTGAGGCTCAGGCATGTGACCTGCAGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp GCAGGTGGGGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTaGAGGCCAGGCAGCCTTGGCTACTGCTCTGTGGCTGGGCCTCCA +
Preference number: 1 (lower is better)
Translates to: AGGVDLGLIHRLETT*RPGSLGYCSVAGPP
Trigger: TGGAGGCCCAGCCACAGAGCAGTAGCCAAGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACCCCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp GACTCTGATGGGCAGGTAGGTTCCAGCGGGCGAGGCGGACGTGGCTaGCCTAAGGTGTGGAGATGCCCTAGGCAGGCAGGCAGACATTAC +
Preference number: 1 (lower is better)
Translates to: DSDGQVGSSGRGGRG*PKVWRCPRQAGRHY
Trigger: GTAATGTCTGCCTGCCTGCCTAGGGCATCTCCACACCTTAGGCCAGCCACGTCCGCCTCGCCCGCTGGAACCTACCTGCCCATCAGAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR GCA 90 bp GGTTCCAGCGGGCGAGGCGGACGTGGCTGGCCTAAGGTGTGGAGATaGCCTAGGCAGGCAGGCAGACATTACCTGAACACGGAATCAGTC +
Preference number: 1 (lower is better)
Translates to: GSSGRGGRGWPKVWR*PRQAGRHYLNTESV
Trigger: GACTGATTCCGTGTTCAGGTAATGTCTGCCTGCCTGCCTAGGGCATCTCCACACCTTAGGCCAGCCACGTCCGCCTCGCCCGCTGGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR GCA 90 bp GTGGCAGCCACCAAGCTGCAGAACAAGAGATTCTACCCGATGGTGTaGTCCACGGCGGCCCGGAGCAGCATGAAGGTCACCCGCTCCTGT +
Preference number: 1 (lower is better)
Translates to: VAATKLQNKRFYPMV*STAARSSMKVTRSC
Trigger: ACAGGAGCGGGTGACCTTCATGCTGCTCCGGGCCGCCGTGGAGCACACCATCGGGTAGAATCTCTTGTTCTGCAGCTTGGTGGCTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 90 bp GAGATCAAGATGACCTCTCCCGTCTACGGCACCGACATGGTAAGTTaGTTCGGCCCAGGGTGCTTCTGGGGAACCTGGCTCCGGCAGCCC +
Preference number: 1 (lower is better)
Translates to: EIKMTSPVYGTDMVS*FGPGCFWGTWLRQP
Trigger: GGGCTGCCGGAGCCAGGTTCCCCAGAAGCACCCTGGGCCGAAGCAACTTACCATGTCGGTGCCGTAGACGGGAGAGGTCATCTTGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CCA 90 bp TGCAGGGCTGGCCTAGCAGGGAAGGTGTCCACACCATCTCAGCTCTaGGCAGGTGGGGTGGACCTGGGGCTTATCCACCGTCTAGAAACC +
Preference number: 1 (lower is better)
Translates to: CRAGLAGKVSTPSQL*AGGVDLGLIHRLET
Trigger: GGTTTCTAGACGGTGGATAAGCCCCAGGTCCACCCCACCTGCCCAGAGCTGAGATGGTGTGGACACCTTCCCTGCTAGGCCAGCCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp CAGGTAGGTTCCAGCGGGCGAGGCGGACGTGGCTGGCCTAAGGTGTaGAGATGCCCTAGGCAGGCAGGCAGACATTACCTGAACACGGAA +
Preference number: 1 (lower is better)
Translates to: QVGSSGRGGRGWPKV*RCPRQAGRHYLNTE
Trigger: TTCCGTGTTCAGGTAATGTCTGCCTGCCTGCCTAGGGCATCTCCACACCTTAGGCCAGCCACGTCCGCCTCGCCCGCTGGAACCTACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 90 bp CCCTTCCCTGCCTGGGGTTCAGGCTGGGCCCCTCCCTTCCAGGTGTaGCAGCCACCAAGCTGCAGAACAAGAGATTCTACCCGATGGTGT +
Preference number: 1 (lower is better)
Translates to: PFPAWGSGWAPPFQV*QPPSCRTRDSTRWC
Trigger: ACACCATCGGGTAGAATCTCTTGTTCTGCAGCTTGGTGGCTGCCACACCTGGAAGGGAGGGGCCCAGCCTGAACCCCAGGCAGGGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CCA 90 bp GCCCCTGTTCCTAGATGGTGGGCATCGGGACGTCGGATGTGGACCTaGACAAATACCGCCACACGTTCTGCAGCCTGCTGGGCAGGGATG +
Preference number: 1 (lower is better)
Translates to: APVPRWWASGRRMWT*TNTATRSAACWAGM
Trigger: CATCCCTGCCCAGCAGGCTGCAGAACGTGTGGCGGTATTTGTCCAGGTCCACATCCGACGTCCCGATGCCCACCATCTAGGAACAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CCA 90 bp TGCCTGGCCCCTGTTCCTAGATGGTGGGCATCGGGACGTCGGATGTaGACCTGGACAAATACCGCCACACGTTCTGCAGCCTGCTGGGCA +
Preference number: 1 (lower is better)
Translates to: CLAPVPRWWASGRRM*TWTNTATRSAACWA
Trigger: TGCCCAGCAGGCTGCAGAACGTGTGGCGGTATTTGTCCAGGTCCACATCCGACGTCCCGATGCCCACCATCTAGGAACAGGGGCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 90 bp TCTTGTGGGAGGCTGCGAGGACGAGAGCCTGGCTGGAGCCCGCGTTaGTGTTCCCACAGGGCCTCGGTTTTTCCTAACTTGCTCTGCATG +
Preference number: 1 (lower is better)
Translates to: SCGRLRGREPGWSPR*CSHRASVFPNLLCM
Trigger: CATGCAGAGCAAGTTAGGAAAAACCGAGGCCCTGTGGGAACAGCAACGCGGGCTCCAGCCAGGCTCTCGTCCTCGCAGCCTCCCACAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp ATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTTGGCTACTaGTCTGTGGCTGGGCCTCCAGGGCCCTCCTGGTCATGCAGAATG +
Preference number: 1 (lower is better)
Translates to: IHRLETTWRPGSLGY*SVAGPPGPSWSCRM
Trigger: CATTCTGCATGACCAGGAGGGCCCTGGAGGCCCAGCCACAGAGCAGTAGCCAAGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp GGATGCAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTaGTTGTCCTGTGTCACCAAATGGGCCTGCAGTCTGTTGTGGGCA +
Preference number: 1 (lower is better)
Translates to: GCRRACGLGSVRHMC*LSCVTKWACSLLWA
Trigger: TGCCCACAACAGACTGCAGGCCCATTTGGTGACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp GTGGGATGCAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTaGTGCTTGTCCTGTGTCACCAAATGGGCCTGCAGTCTGTTGTGG +
Preference number: 1 (lower is better)
Translates to: VGCRRACGLGSVRHM*CLSCVTKWACSLLW
Trigger: CCACAACAGACTGCAGGCCCATTTGGTGACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTGCATCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp GTCACCAAATGGGCCTGCAGTCTGTTGTGGGCAGGAGGTAGGCAGTaGCTTCAGTCTTTCTCCTTCTCCAGGGAACCCGGCCCTGGGCCT +
Preference number: 1 (lower is better)
Translates to: VTKWACSLLWAGGRQ*LQSFSFSREPGPGP
Trigger: AGGCCCAGGGCCGGGTTCCCTGGAGAAGGAGAAAGACTGAAGCCACTGCCTACCTCCTGCCCACAACAGACTGCAGGCCCATTTGGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp CTCAGGTGTTTGTCTGTCTGCAGCCCAGGTGATCTGACATGCTTGTaGGCTTTGCAGGCAGAGCTACCTGCCCCCATGGCCCCTGACCCC +
Preference number: 1 (lower is better)
Translates to: LRCLSVCSPGDLTCL*ALQAELPAPMAPDP
Trigger: GGGGTCAGGGGCCATGGGGGCAGGTAGCTCTGCCTGCAAAGCCCACAAGCATGTCAGATCACCTGGGCTGCAGACAGACAAACACCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp CTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTaGGGATCACATCATCTCTCTGGACCAGCCCTCAACCCTCACTGT +
Preference number: 1 (lower is better)
Translates to: LEAGGAHVMVPCGFS*GSHHLSGPALNPHC
Trigger: ACAGTGAGGGTTGAGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp CCACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTaGCTTCTCCTGGGGATCACATCATCTCTCTGGACCAGCCCTCAA +
Preference number: 1 (lower is better)
Translates to: PRSPGSWWRPCHGPL*LLLGITSSLWTSPQ
Trigger: TTGAGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp CAGTGTCCTGCCCTGAAGCTGGCTTTCGATAGGTCCACGTTCACCTaGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCT +
Preference number: 1 (lower is better)
Translates to: QCPALKLAFDRSTFT*KLVAPMSWSPVASP
Trigger: AGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGTGGACCTATCGAAAGCCAGCTTCAGGGCAGGACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp GGAGCCCGCGTTGCTGTTCCCACAGGGCCTCGGTTTTTCCTAACTTaGTCTGCATGCTGTCAGCGGCTGCCCCGCCGTCATAGACTTAAA +
Preference number: 1 (lower is better)
Translates to: GARVAVPTGPRFFLT*SACCQRLPRRHRLK
Trigger: TTTAAGTCTATGACGGCGGGGCAGCCGCTGACAGCATGCAGAGCAAGTTAGGAAAAACCGAGGCCCTGTGGGAACAGCAACGCGGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp GAACAGCTCAGGTGTTTGTCTGTCTGCAGCCCAGGTGATCTGACATaGTTGTGGGCTTTGCAGGCAGAGCTACCTGCCCCCATGGCCCCT +
Preference number: 1 (lower is better)
Translates to: EQLRCLSVCSPGDLT*LWALQAELPAPMAP
Trigger: AGGGGCCATGGGGGCAGGTAGCTCTGCCTGCAAAGCCCACAAGCATGTCAGATCACCTGGGCTGCAGACAGACAAACACCTGAGCTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp TGTCATGGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTaGACCAGCCCTCAACCCTCACTGTCACAAGGCCTCTGCCACAGG +
Preference number: 1 (lower is better)
Translates to: CHGPLWLLLGITSSL*TSPQPSLSQGLCHR
Trigger: CCTGTGGCAGAGGCCTTGTGACAGTGAGGGTTGAGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 90 bp GTTGCTGTTCCCACAGGGCCTCGGTTTTTCCTAACTTGCTCTGCATaGTGTCAGCGGCTGCCCCGCCGTCATAGACTTAAAGGACCAGGC +
Preference number: 1 (lower is better)
Translates to: VAVPTGPRFFLTCSA*CQRLPRRHRLKGPG
Trigger: GCCTGGTCCTTTAAGTCTATGACGGCGGGGCAGCCGCTGACAGCATGCAGAGCAAGTTAGGAAAAACCGAGGCCCTGTGGGAACAGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 90 bp TTCGATAGGTCCACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATaGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTGGAC +
Preference number: 1 (lower is better)
Translates to: FDRSTFTWKLVAPMS*SPVASPGDHIISLD
Trigger: GTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGTGGACCTATCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 90 bp GCTCTCAGGGCTGCCCCAGCCTGGGCCTCTCTTGCAGATTTCGACTaGGTCTGGGATGACTTAAATAAGTCATCAGCCACCCTGCTGAGC +
Preference number: 1 (lower is better)
Translates to: ALRAAPAWASLADFD*VWDDLNKSSATLLS
Trigger: GCTCAGCAGGGTGGCTGATGACTTATTTAAGTCATCCCAGACCCAGTCGAAATCTGCAAGAGAGGCCCAGGCTGGGGCAGCCCTGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CCA 90 bp GCGTTTCACAGGATCTACCTGGGTTTTATTGAGCTGCTCAGATCCTaGAGTGAGGTACGGGCTCCTGAAGCGTTCTGGAGCCCTGGCTGG +
Preference number: 1 (lower is better)
Translates to: AFHRIYLGFIELLRS*SEVRAPEAFWSPGW
Trigger: CCAGCCAGGGCTCCAGAACGCTTCAGGAGCCCGTACCTCACTCCAGGATCTGAGCAGCTCAATAAAACCCAGGTAGATCCTGTGAAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 90 bp TCGCGGTTCGGCCAGGGCTCCATCATTGGCGTGCACCTGGACACCTaGCACGGCACACTCACCTTTTTCAAGAACAGGAAGTGTATAGGT +
Preference number: 1 (lower is better)
Translates to: SRFGQGSIIGVHLDT*HGTLTFFKNRKCIG
Trigger: ACCTATACACTTCCTGTTCTTGAAAAAGGTGAGTGTGCCGTGCCAGGTGTCCAGGTGCACGCCAATGATGGAGCCCTGGCCGAACCGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 90 bp GTTGCTGTTCCCACAGGGCCTCGGTTTTTCCTAACTTGCTCTGCATaGTGTCAGCGGCTGCCCCGCCGTCATAGACTTAAAGGACTGCAA +
Preference number: 1 (lower is better)
Translates to: VAVPTGPRFFLTCSA*CQRLPRRHRLKGLQ
Trigger: TTGCAGTCCTTTAAGTCTATGACGGCGGGGCAGCCGCTGACAGCATGCAGAGCAAGTTAGGAAAAACCGAGGCCCTGTGGGAACAGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR TCA 90 bp GGCCTAAGGTGTGGAGATGCCCTAGGCAGGCAGGCAGACATTACCTaGACACGGAATCAGTCGGAGAAAAAGATGCTTCTGAGGCTAGAG +
Preference number: 1 (lower is better)
Translates to: GLRCGDALGRQADIT*TRNQSEKKMLLRLE
Trigger: CTCTAGCCTCAGAAGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCCTGCCTGCCTAGGGCATCTCCACACCTTAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR GCA 90 bp GTGCTTTCTCCTCTGAAACACATGGTGCATGGAGAGGTTGGCAGTTaGTTTTGGTTCATTCAACAGAAATTCTCCACTACGGGGCTGGGC +
Preference number: 1 (lower is better)
Translates to: VLSPLKHMVHGEVGS*FWFIQQKFSTTGLG
Trigger: GCCCAGCCCCGTAGTGGAGAATTTCTGTTGAATGAACCAAAAGCAACTGCCAACCTCTCCATGCACCATGTGTTTCAGAGGAGAAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 90 bp TCTCCTCTGAAACACATGGTGCATGGAGAGGTTGGCAGTTGCTTTTaGTTCATTCAACAGAAATTCTCCACTACGGGGCTGGGCACTGTG +
Preference number: 1 (lower is better)
Translates to: SPLKHMVHGEVGSCF*FIQQKFSTTGLGTV
Trigger: CACAGTGCCCAGCCCCGTAGTGGAGAATTTCTGTTGAATGAACCAAAAGCAACTGCCAACCTCTCCATGCACCATGTGTTTCAGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 90 bp GTCGGAGAAAAAGATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTaGGCCTGTCTCCTGGATGCACCGCATTCAGTAAGACTCTTTAAT +
Preference number: 1 (lower is better)
Translates to: VGEKDASEARGPVQT*ACLLDAPHSVRLFN
Trigger: ATTAAAGAGTCTTACTGAATGCGGTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCATCTTTTTCTCCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR TCA 90 bp CTTGAAGGTAAAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTaGAGGTATTCAGAACAGCTCAGGTGTTTGTCTGTCTGCAGCCCA +
Preference number: 1 (lower is better)
Translates to: LEGKNFCTCSGRPGT*RYSEQLRCLSVCSP
Trigger: TGGGCTGCAGACAGACAAACACCTGAGCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTTTACCTTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp ACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCAGGGCGGAGTTGGATaGGGCCCGTCCGGAGGGAGC +
Preference number: 2 (lower is better)
Translates to: TSAHPSSREPRPCQRKRCQGGVG*GPSGGS
Trigger: GCTCCCTCCGGACGGGCCTCATCCAACTCCGCCCTG...GCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGAGGCTGGAGCCCGCGTTaGTGTTCCCACAGGGCCTCG +
Preference number: 2 (lower is better)
Translates to: PTPAVASLGPARGSAAAGGWSPR*CSHRAS
Trigger: CGAGGCCCTGTGGGAACAGCAACGCGGGCTCCAGCC...TCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp AGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAGGCTGGAGCCCGCGTTaGTGTTCCCACAGGGCCTCG +
Preference number: 2 (lower is better)
Translates to: RQRPPPTPAVASLGPARGGWSPR*CSHRAS
Trigger: CGAGGCCCTGTGGGAACAGCAACGCGGGCTCCAGCC...TCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCGCTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCCCTCTGCTGCTGTaGTGGGTGGGGAAGCGGCTG +
Preference number: 2 (lower is better)
Translates to: RPPPTPAVASLGPARGSAAPLLL*WVGKRL
Trigger: CAGCCGCTTCCCCACCCAGCACAGCAGCAGAGGGGC...AGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCAGCCCCTGCTGGGACTaGACTGCGGGCGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLSPCWD*TAGGPG
Trigger: CCCAGGCCCGCCCGCAGTGCAGTCCCAGCAGGGGCT...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CAA 90 bp CTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCACTTaGAGTGGGTCCGTGGCCCAGCCTGGAAGCTCAGGGCTGGGAGTG +
Preference number: 2 (lower is better)
Translates to: LEPWLGTGAAPAVPT*SGSVAQPGSSGLGV
Trigger: CACTCCCAGCCCTGAGCTTCCAGGCTGGGCCACGGACCCACTCAAAGTGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp GCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGTCCCCAAGGCTGCATaGTGTCCTGGTGGTCCCACG +
Preference number: 2 (lower is better)
Translates to: ASCGQTRETRWRVCRCRRVPKAA*CPGGPT
Trigger: CGTGGGACCACCAGGACAGCATGCAGCCTTGGGGAC...CCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp ACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCTCCAGTACCTGTGCTaGCACCGCCTGCGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: TSAHPSSREPRPCQRKRCLQYLC*HRLRQL
Trigger: CAGCTGGCGCAGGCGGTGGCAGCACAGGTACTGGAG...GCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GCTCCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCGCCATCCATCCCCAGTaGGGTGCCCGTGACCGGCGA +
Preference number: 2 (lower is better)
Translates to: APEAFWSPGWAPVRPLQSAIHPQ*GARDRR
Trigger: TCGCCGGTCACGGGCACCGCACTGGGGATGGATGGC...GGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp TGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGACACGCTGGAGGGTCTaGCGCTGCCGCCGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: CAGQSEASFCSSLHSAHRTRWRV*RCRRAS
Trigger: TGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGT...CCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GTAGCAGCCTGCACTCGGCCCACCGGGGCAGGGACTGCCGCCGATGGTGTGCTCCTCCAGTACCTGTGCTaGCACCGCCTGCGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: VAACTRPTGAGTAADGVLLQYLC*HRLRQL
Trigger: CAGCTGGCGCAGGCGGTGGCAGCACAGGTACTGGAG...GAGCACACCATCGGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp CCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAACAAGCTGGGCTGGGTCCTGGGGTCCACATGTGGCTaGGGGTCCTCCCCCACCGCC +
Preference number: 2 (lower is better)
Translates to: PLPPGLKQVLHNKLGWVLGSTCG*GSSPTA
Trigger: GGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCC...CAGGACCCAGCCCAGCTTGTTGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GTAGCAGCCTGCACTCGGCCCACCGGGGCAGGGACTGCCGCCGATGGTGTGCTCACTCCAGGGCGGAGTTaGATGAGGCCCGTCCGGAGG +
Preference number: 2 (lower is better)
Translates to: VAACTRPTGAGTAADGVLTPGRS*MRPVRR
Trigger: CCTCCGGACGGGCCTCATCCAACTCCGCCCTGGAGT...GAGCACACCATCGGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCAGTCCCCAAGGCTGCATaGTGTCCTGGTGGTCCCACG +
Preference number: 2 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPVPKAA*CPGGPT
Trigger: CGTGGGACCACCAGGACAGCATGCAGCCTTGGGGAC...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564182.1
3UTR-3UTR GCA 90 bp CCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACATGCTGTCAGCGGCTaGCCCGCCGTCATAGACTTA +
Preference number: 2 (lower is better)
Translates to: PTPAVASLGPARGSAAAGHAVSG*PAVIDL
Trigger: TAAGTCTATGACGGCGGGGCAGCCGCTGACAGCATG...TCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAACCGCCTGCGCCAGCTaGGGCCAGACTCGGGAGACA +
Preference number: 2 (lower is better)
Translates to: ETRWRVCRCRRASSRCYTTACAS*GQTRET
Trigger: TGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGCGGT...TGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCCCTTCTGTAGCAGCCTaGACTCGGCCCACCGGGGCA +
Preference number: 2 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLPSVAA*TRPTGA
Trigger: TGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGG...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp CCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGATCTTGCTCCCGAGGCTaGGACAGTCCTTTCTGTGGG +
Preference number: 2 (lower is better)
Translates to: PTPAVASLGPARGSAAAGSCSRG*DSPFCG
Trigger: CCCACAGAAAGGACTGTCCCAGCCTCGGGAGCAAGA...TCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGTGGAACTGCCTTCTTaGGCTGGGACAGCCCCTTTC +
Preference number: 2 (lower is better)
Translates to: ASCGQTRETRWRVCRCRRVELPS*AGTAPF
Trigger: GAAAGGGGCTGTCCCAGCCCAAGAAGGCAGTTCCAC...CCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp ACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCTCTTAAAGGACCAGGCTaGGGGTCCACATGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: TPAVASLGPARGSAAAGPLKGPG*GSTCGW
Trigger: CCAGCCACATGTGGACCCTCAGCCTGGTCCTTTAAG...AGGTCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR TCA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCTGCAGGTCACATGCCTaGGCCTCACAGGCTCGTGGC +
Preference number: 2 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLCRSHA*ASQARG
Trigger: GCCACGAGCCTGTGAGGCTCAGGCATGTGACCTGCA...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp CCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCACTGGGGCTACGACTCTaGTGGGCAGGTAGGTTCCAG +
Preference number: 2 (lower is better)
Translates to: PEAFWSPGWAPVRPLQSPLGLRL*WAGRFQ
Trigger: CTGGAACCTACCTGCCCATCAGAGTCGTAGCCCCAG...TGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCGGGTGGGGAAGCGGCTaGCCTGAGCCCCAGGTCTTG +
Preference number: 2 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPGWGSG*PEPQVL
Trigger: CAAGACCTGGGGCTCAGGGCAGCCGCTTCCCCACCC...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCGCCCCTCTGCTGCTGTaGTGGGTGGGGAAGCGGCTG +
Preference number: 2 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPAPLLL*WVGKRL
Trigger: CAGCCGCTTCCCCACCCAGCACAGCAGCAGAGGGGC...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GCCACCGCCTGCGCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGGGCCTCAAGCAGGTaGTACACAACAAGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: ATACASCGQTRETRWRVCRASSR*YTTSWA
Trigger: AGCCCAGCTTGTTGTGTAGCACCTGCTTGAGGCCCG...GCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGCGGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp AGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAGTGGAACTGCCTTCTTaGGCTGGGACAGCCCCTTTC +
Preference number: 2 (lower is better)
Translates to: RQRPPPTPAVASLGPARGVELPS*AGTAPF
Trigger: GAAAGGGGCTGTCCCAGCCCAAGAAGGCAGTTCCAC...TCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCGCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp TGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGGTCTTGTGGGAGGCTaGGAGGACGAGAGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: CAGQSEASFCSSLHSAHRGLVGG*EDESLA
Trigger: AGCCAGGCTCTCGTCCTCGCAGCCTCCCACAAGACC...CCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GCCTCCAGGGCCCTCCTGGTCATGCAGAATGGGGCAGAGCCGGAGCCCGTTGGGGAGGGAGCCATCTCTTaGTCCCGAGGCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: ASRALLVMQNGAEPEPVGEGAIS*SRGWDS
Trigger: ACTGTCCCAGCCTCGGGAGCAAGAGATGGCTCCCTC...CCCAACGGGCTCCGGCTCTGCCCCATTCTGCATGACCAGGAGGGCCCTGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp ACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCTACTTCCCAGTGGAACTaGCTTCTTGGGCTGGGACAG +
Preference number: 2 (lower is better)
Translates to: TPAVASLGPARGSAAAGPTSQWN*LLGLGQ
Trigger: CTGTCCCAGCCCAAGAAGGCAGTTCCACTGGGAAGT...AGGTCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCCCTTCTGTAGCAGCCTaGACTCGGCCCACCGGGGCA +
Preference number: 2 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPPSVAA*TRPTGA
Trigger: TGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGG...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTGGATGCAGGCGTGCCTaGGGGCTCGGCAGTGTTCGA +
Preference number: 2 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGGCRRA*GLGSVR
Trigger: TCGAACACTGCCGAGCCCGCAGGCACGCCTGCATCC...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCACAGCTCCCCTGCGCTaGTGTTCCGGCTCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPTAPLR*CSGSAR
Trigger: CCTGGCTGAGCCGGAACAGCAGCGCAGGGGAGCTGT...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTTTCTACCCGATGGTGTaGTCCACGGCGGCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGFYPMV*STAARS
Trigger: GCTCCGGGCCGCCGTGGAGCACACCATCGGGTAGAA...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTAGCGAGGACGAGAGCCTaGCTGGAGCCCGCGTTGCTG +
Preference number: 2 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLARTRA*LEPALL
Trigger: CAGCAACGCGGGCTCCAGCCAGGCTCTCGTCCTCGC...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GCCTGTAGTGGGCACTGGGCAGTAGGACCCTGTGGTGAGCCAGGTCTGCTCAGGACTCGGGAGACACGCTaGAGGGTCTGCCGCTGCCGC +
Preference number: 2 (lower is better)
Translates to: ACSGHWAVGPCGEPGLLRTRETR*RVCRCR
Trigger: GCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGT...CCTGAGCAGACCTGGCTCACCACAGGGTCCTACTGCCCAGTGCCCACTACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp CCCAGGCCTCCTCCACCACAAGGGCGACAAGACCAGCTTCTCATCGCGGTTCGGACTCGGGAGACACGCTaGAGGGTCTGCCGCTGCCGC +
Preference number: 2 (lower is better)
Translates to: PRPPPPQGRQDQLLIAVRTRETR*RVCRCR
Trigger: GCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGT...CCGAACCGCGATGAGAAGCTGGTCTTGTCGCCCTTGTGGTGGAGGAGGCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCACCCCCATCCTTTCCTaGGTGGGTCAGGGACAGGGT +
Preference number: 2 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLTPILS*VGQGQG
Trigger: ACCCTGTCCCTGACCCACCCAGGAAAGGATGGGGGT...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CAA 90 bp GCTTGTCCTCTGTCACCATGGGCCGTGTCCTTCCGGGGCGGCTGCTaGTGTGACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGC +
Preference number: 2 (lower is better)
Translates to: ACPLSPWAVSFRGGC*CDLVLLSAVTAPLR
Trigger: GCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGTCACACAAGCAGCCGCCCCGGAAGGACACGGCCCATGGTGACAGAGGACAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CAA 90 bp GGGCGTGTCCACAGGCCAGGCCAGTGTCTGACACACGCATGCTGCTaGTCCTCTGTCACCATGGGCCGTGTCCTTCCGGGGCGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: GRVHRPGQCLTHACC*SSVTMGRVLPGRLL
Trigger: AAGCAGCCGCCCCGGAAGGACACGGCCCATGGTGACAGAGGACAAGCAGCATGCGTGTGTCAGACACTGGCCTGGCCTGTGGACACGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp CCACAAGGGCGACAAGACCAGCTTCTCATCGCGGTTCGGCCAGGGCTCCATCATCAGGGCGGAGTTGGATaGGGCCCGTCCGGAGGGAGC +
Preference number: 2 (lower is better)
Translates to: PQGRQDQLLIAVRPGLHHQGGVG*GPSGGS
Trigger: GCTCCCTCCGGACGGGCCTCATCCAACTCCGCCCTG...ATGATGGAGCCCTGGCCGAACCGCGATGAGAAGCTGGTCTTGTCGCCCTTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR TCA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTGACAGAGGGCAAGGGTaGGAGGGTAGAGAGCGGGCA +
Preference number: 2 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGDRGQG*EGRERA
Trigger: TGCCCGCTCTCTACCCTCTCACCCTTGCCCTCTGTC...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp TGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGTCTGTCCCCAAGGCTaGATGCTGTCCTGGTGGTCC +
Preference number: 2 (lower is better)
Translates to: CAGQSEASFCSSLHSAHRVCPQG*MLSWWS
Trigger: GGACCACCAGGACAGCATGCAGCCTTGGGGACAGAC...CCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp ACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCTTTCCTAACTTGCTCTaGATGCTGTCAGCGGCTGCC +
Preference number: 2 (lower is better)
Translates to: TSAHPSSREPRPCQRKRCFPNLL*MLSAAA
Trigger: GGCAGCCGCTGACAGCATGCAGAGCAAGTTAGGAAA...GCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GAGAGCGGGCAACAGGTAGTAACAGCCGGCCCTTCTCTCCCAGCACAGCGACTCGGGTGGGGAAGCGGCTaGCCTGAGCCCCAGGTCTTG +
Preference number: 2 (lower is better)
Translates to: ESGQQVVTAGPSLPAQRLGWGSG*PEPQVL
Trigger: CAAGACCTGGGGCTCAGGGCAGCCGCTTCCCCACCC...GAGTCGCTGTGCTGGGAGAGAAGGGCCGGCTGTTACTACCTGTTGCCCGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTACACGCTGGAGGGTCTaGCGCTGCCGCCGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPTRWRV*RCRRAS
Trigger: TGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGT...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GCCTGTAGTGGGCACTGGGCAGTAGGACCCTGTGGTGAGCCAGGTCTGCTCAGGTGTGGGATGCAGGCGTaGCTGCGGGCTCGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: ACSGHWAVGPCGEPGLLRCGMQA*LRARQC
Trigger: ACACTGCCGAGCCCGCAGGCACGCCTGCATCCCACA...CCTGAGCAGACCTGGCTCACCACAGGGTCCTACTGCCCAGTGCCCACTACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp ACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTTGCCCTGAGGCCGGGTaGCTGCAGCTGGGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: TFTWKLVAPMSWSPVASPCPEAG*LQLGLV
Trigger: CACCAGGCCCAGCTGCAGCCACCCGGCCTCAGGGCA...AGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGAGGGCCAGCACTTCTGGGAGATCAAGATGACCTCTCCCGTCTACGGCACCGATGCCCTGAGGCCGGGTaGCTGCAGCTGGGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: GGPALLGDQDDLSRLRHRCPEAG*LQLGLV
Trigger: CACCAGGCCCAGCTGCAGCCACCCGGCCTCAGGGCA...TCGGTGCCGTAGACGGGAGAGGTCATCTTGATCTCCCAGAAGTGCTGGCCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCAGCCTCACAGGCTCGTaGCTGTGGGATGCAGGCGTG +
Preference number: 2 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPSLTGS*LWDAGV
Trigger: CACGCCTGCATCCCACAGCCACGAGCCTGTGAGGCT...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCTGTCCTCTGTCACCATaGGCCGTGTCCTTCCGGGGC +
Preference number: 2 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPCPLSP*AVSFRG
Trigger: GCCCCGGAAGGACACGGCCCATGGTGACAGAGGACA...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp CAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTTGTCCTGTGTACAGTGAGGCCAGGCTaGAGTGGCAGGGCCAGCGCG +
Preference number: 2 (lower is better)
Translates to: QACLRARQCSTHVLLVLCTVRPG*SGRASA
Trigger: CGCGCTGGCCCTGCCACTCCAGCCTGGCCTCACTGT...ACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CAA 90 bp GAGGACTCCCTAAGCCCGGTGGGTCCATTAGGCCTTGGGGGCAAATaGGGAAACAGGGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: EDSLSPVGPLGLGGK*GNRVLTHRVGAVLR
Trigger: CCTCAGGACGGCCCCCACCCGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACCGGGCTTAGGGAGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp TCTAGATTCTTTCCACCATGGCCAGACGCCCCCGGAACAGCAGGGCCTGGCACTCCAGTGCGGTGCCCGTaGCCGGCGAGTCCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: SRFFPPWPDAPGTAGPGTPVRCP*PASPSV
Trigger: CACAGAAGGACTCGCCGGTCACGGGCACCGCACTGG...AGTGCCAGGCCCTGCTGTTCCGGGGGCGTCTGGCCATGGTGGAAAGAATCTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR TCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTACAGGGAGGTGACAGCTaGAACCTGCACCAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLQGGDS*NLHQEG
Trigger: CCCCTCCTGGTGCAGGTTTCAGCTGTCACCTCCCTG...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp CCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCACAGGCAGACATTACCTaGACACGGAATCAGTCGGAG +
Preference number: 2 (lower is better)
Translates to: PEAFWSPGWAPVRPLQSPQADIT*TRNQSE
Trigger: CTCCGACTGATTCCGTGTTCAGGTAATGTCTGCCTG...TGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp GGGGCCTACGTGTTCAGGACTCAGCACAGGAACCGCCAGCCATCTGCCAGCCAGGTCCCCAAGGCTGCATaGTGTCCTGGTGGTCCCACG +
Preference number: 2 (lower is better)
Translates to: GAYVFRTQHRNRQPSASQVPKAA*CPGGPT
Trigger: CGTGGGACCACCAGGACAGCATGCAGCCTTGGGGAC...CTGGCTGGCAGATGGCTGGCGGTTCCTGTGCTGAGTCCTGAACACGTAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR GCA 90 bp AGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGACGGTTTTTCCTAACTTaGTCTGCATGCTGTCAGCGG +
Preference number: 2 (lower is better)
Translates to: RQRPPPTPAVASLGPARGRFFLT*SACCQR
Trigger: CCGCTGACAGCATGCAGAGCAAGTTAGGAAAAACCG...TCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTTGTCCTGTGTGCTCTAGGGCCCCTCTaGTGCTGTGCTGGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: QACLRARQCSTHVLLVLCALGPL*CCAGWG
Trigger: TCCCCACCCAGCACAGCAGCAGAGGGGCCCTAGAGC...ACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp ACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTGCTGTTCCGGCTCAGCCGAGTACTCCACGCTaGCGCCATCCATCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: TWCCSLLSQLPCAAVPAQPSTPR*RHPSPV
Trigger: CACTGGGGATGGATGGCGGCAGCGTGGAGTACTCGG...CTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTATCCTTCCGGGGCGGCTaGTTGTGTGACCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLSFRGG*LCDLVL
Trigger: CAGCACCAGGTCACACAAGCAGCCGCCCCGGAAGGA...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCATGTCTGACACACGCATaGTGCTTGTCCTCTGTCACC +
Preference number: 2 (lower is better)
Translates to: PEAFWSPGWAPVRPLQSPCLTHA*CLSSVT
Trigger: GGTGACAGAGGACAAGCAGCATGCGTGTGTCAGACA...TGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp CCCAGGCCTCCTCCACCACAAGGGCGACAAGACCAGCTTCTCATCGCGGTTCGGACCGCCCAGGGTGTCTaGTCTGTCCCCAAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: PRPPPPQGRQDQLLIAVRTAQGV*SVPKAA
Trigger: TGCAGCCTTGGGGACAGACCAGACACCCTGGGCGGT...CCGAACCGCGATGAGAAGCTGGTCTTGTCGCCCTTGTGGTGGAGGAGGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp CATGGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTGGACCAGCCCTGGGTCCACATGTGGCTaGGGGTCCTCCCCCACCGCC +
Preference number: 2 (lower is better)
Translates to: HGPLWLLLGITSSLWTSPGSTCG*GSSPTA
Trigger: GGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCC...AGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGAGGGACTGCCGCCGATaGTGTGCTCCACGGCGGCCC +
Preference number: 2 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPRDCRR*CAPRRP
Trigger: GGGCCGCCGTGGAGCACACCATCGGCGGCAGTCCCT...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp GTGAGCCAGGTCTGCTCAGGTAACAGGAAGGTCGTTGGGCCACAGTGTGGTGGGCGTTGGGAGGGAGCCTaGGCTGTGCGCTCGGGGTAC +
Preference number: 2 (lower is better)
Translates to: VSQVCSGNRKVVGPQCGGRWEGA*AVRSGY
Trigger: GTACCCCGAGCGCACAGCCCAGGCTCCCTCCCAACG...CCCACCACACTGTGGCCCAACGACCTTCCTGTTACCTGAGCAGACCTGGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp TCTAGATTCTTTCCACCATGGCCAGACGCCCCCGGAACAGCAGGGCCTGGCACTGGGCCCCTGCAGGGCTaGCCTAGCAGGGAAGGTGTC +
Preference number: 2 (lower is better)
Translates to: SRFFPPWPDAPGTAGPGTGPLQG*PSREGV
Trigger: GACACCTTCCCTGCTAGGCCAGCCCTGCAGGGGCCC...AGTGCCAGGCCCTGCTGTTCCGGGGGCGTCTGGCCATGGTGGAAAGAATCTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCGTGGCGCCCATGTCATaGTCCCCTGTGGCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPVAPMS*SPVASP
Trigger: AGGAGAAGCCACAGGGGACCATGACATGGGCGCCAC...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CAA 90 bp CAAGCAGGTGCTACACAACAAGCTGGGCTGGGTCCTGAGCATGAGTaGCAGCCGCCGCAAGGCTCCAGTGTCCGATCCCCAGGCAGCGAC +
Preference number: 2 (lower is better)
Translates to: QAGATQQAGLGPEHE*QPPQGSSVRSPGSD
Trigger: GTCGCTGCCTGGGGATCGGACACTGGAGCCTTGCGGCGGCTGCAACTCATGCTCAGGACCCAGCCCAGCTTGTTGTGTAGCACCTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTGCCGCCGGACCTGACTaGCTTCCCAGTGGAACTGCC +
Preference number: 2 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPAAGPD*LPSGTA
Trigger: GGCAGTTCCACTGGGAAGTCAGTCAGGTCCGGCGGC...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTCGCTGCCGCCGGACCTaGCTGACTTCCCAGTGGAAC +
Preference number: 2 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPRCRRT*LTSQWN
Trigger: GTTCCACTGGGAAGTCAGTCAGGTCCGGCGGCAGCG...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp CATGGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTGGACCAGCCCTCCAGTGCGGTGCCCGTaGCCGGCGAGTCCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: HGPLWLLLGITSSLWTSPPVRCP*PASPSV
Trigger: CACAGAAGGACTCGCCGGTCACGGGCACCGCACTGG...AGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGCTGTGCCCGGGCTCCTaGCTCAGGGGGTCTACCCTG +
Preference number: 2 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPLCPGS*LRGSTL
Trigger: CAGGGTAGACCCCCTGAGTCAGGAGCCCGGGCACAG...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTGGGCGGCTGCTTGTGTaGCCTGGTGCTGCTCTCTGC +
Preference number: 2 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPGRLLV*PGAALC
Trigger: GCAGAGAGCAGCACCAGGTCACACAAGCAGCCGCCC...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GTGAGCCAGGTCTGCTCAGGTAACAGGAAGGTCGTTGGGCCACAGTGTGGTGGGTCCCTCCAGTACCTGTaGTGCCACCGCCTGCGCCAG +
Preference number: 2 (lower is better)
Translates to: VSQVCSGNRKVVGPQCGGSLQYL*CHRLRQ
Trigger: CTGGCGCAGGCGGTGGCAGCACAGGTACTGGAGGGA...CCCACCACACTGTGGCCCAACGACCTTCCTGTTACCTGAGCAGACCTGGCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GGAGGGCCAGCACTTCTGGGAGATCAAGATGACCTCTCCCGTCTACGGCACCGATCCCTCCAGTACCTGTaGTGCCACCGCCTGCGCCAG +
Preference number: 2 (lower is better)
Translates to: GGPALLGDQDDLSRLRHRSLQYL*CHRLRQ
Trigger: CTGGCGCAGGCGGTGGCAGCACAGGTACTGGAGGGA...TCGGTGCCGTAGACGGGAGAGGTCATCTTGATCTCCCAGAAGTGCTGGCCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR GCA 90 bp CAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTTGTCCTGTGTCCGAGTACTCCACGCTaGCGCCATCCATCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: QACLRARQCSTHVLLVLCPSTPR*RHPSPV
Trigger: CACTGGGGATGGATGGCGGCAGCGTGGAGTACTCGG...ACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp ACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTGCTGTTCCGGCTCAGAGAGTTGTCTGGGCCTaGCTTGTCTGTGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: TWCCSLLSQLPCAAVPAQRVVWA*LVCGVG
Trigger: CCCCACCCCACAGACAAGGCAGGCCCAGACAACTCT...CTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GTGAGCCAGGTCTGCTCAGGTAACAGGAAGGTCGTTGGGCCACAGTGTGGTGGGGGCCTGCAGTGCAGGTaGTCAGTTCTGTGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: VSQVCSGNRKVVGPQCGGGLQCR*SVLCPG
Trigger: GCCCGGGCACAGAACTGAGCACCTGCACTGCAGGCC...CCCACCACACTGTGGCCCAACGACCTTCCTGTTACCTGAGCAGACCTGGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCCATGCTTGTGGGCTTTaGAGGCAGAGCTACCTGCCC +
Preference number: 2 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPHACGL*RQSYLP
Trigger: GGGCAGGTAGCTCTGCCTGCAAAGCCCACAAGCATG...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp TTCCACATGGAGTACAGCTGCGGCACAGCGGCCATCCGGGGCACCAAGGAGCTGGCTGAAACGTATCCGTaGAGAGGCCGGGCTTGCGAG +
Preference number: 2 (lower is better)
Translates to: FHMEYSCGTAAIRGTKELAETYP*RGRACE
Trigger: CTCGCAAGCCCGGCCTCTGCACGGATACGTTTCAGC...CAGCTCCTTGGTGCCCCGGATGGCCGCTGTGCCGCAGCTGTACTCCATGTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGGCGAGGACGAGAGCCTaGCTGGAGCCCGCGTTGCTG +
Preference number: 2 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPARTRA*LEPALL
Trigger: CAGCAACGCGGGCTCCAGCCAGGCTCTCGTCCTCGC...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTACTCCAGGGCGGAGTTaGATGAGGCCCGTCCGGAGG +
Preference number: 2 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPTPGRS*MRPVRR
Trigger: CCTCCGGACGGGCCTCATCCAACTCCGCCCTGGAGT...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCACTGCCTTCTTGGGCTaGGACAGCCCCTTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPTAFLG*DSPFPL
Trigger: CAGAGGAAAGGGGCTGTCCCAGCCCAAGAAGGCAGT...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACACACAACAAGCTGGGCTaGGTCCTGAGCATGAGTTGC +
Preference number: 2 (lower is better)
Translates to: ETRWRVCRCRRASSRCYTHNKLG*VLSMSC
Trigger: GCAACTCATGCTCAGGACCCAGCCCAGCTTGTTGTG...TGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GAGAGCGGGCAACAGGTAGTAACAGCCGGCCCTTCTCTCCCAGCACAGCGACTCTCTGGGCAGGTGGGGTaGACCTGGGGCTTATCCACC +
Preference number: 2 (lower is better)
Translates to: ESGQQVVTAGPSLPAQRLSGQVG*TWGLST
Trigger: GGTGGATAAGCCCCAGGTCCACCCCACCTGCCCAGA...GAGTCGCTGTGCTGGGAGAGAAGGGCCGGCTGTTACTACCTGTTGCCCGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTATCACCTGGAAGCTGGTaGCGCCCATGTCATGGTCCC +
Preference number: 2 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLSPGSW*RPCHGP
Trigger: GGGACCATGACATGGGCGCCACCAGCTTCCAGGTGA...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTCCCGCGCCCTCTGCCTaGCCCCTGTTCCTAGATGGT +
Preference number: 2 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPPAPSA*PLFLDG
Trigger: ACCATCTAGGAACAGGGGCCAGGCAGAGGGCGCGGG...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CAA 90 bp GGAGATCAAGATGACCTCTCCCGTCTACGGCACCGACATGGTAAGTaGCTTCGGCCCAGGGTGCTTCTGGGGAACCTGGCTCCGGCAGCC +
Preference number: 2 (lower is better)
Translates to: GDQDDLSRLRHRHGK*LRPRVLLGNLAPAA
Trigger: GGCTGCCGGAGCCAGGTTCCCCAGAAGCACCCTGGGCCGAAGCAACTTACCATGTCGGTGCCGTAGACGGGAGAGGTCATCTTGATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR TCA 90 bp TCTAGATTCTTTCCACCATGGCCAGACGCCCCCGGAACAGCAGGGCCTGGCACTCGGCGAGTCCTTCTGTaGCTGTGCTGGGCAGAGCGA +
Preference number: 2 (lower is better)
Translates to: SRFFPPWPDAPGTAGPGTRRVLL*LCWAER
Trigger: TCGCTCTGCCCAGCACAGTCACAGAAGGACTCGCCG...AGTGCCAGGCCCTGCTGTTCCGGGGGCGTCTGGCCATGGTGGAAAGAATCTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR TCA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTGACAGTGTCCTGCCCTaGAGCTGGCTTTCGATAGGT +
Preference number: 2 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGDSVLP*SWLSIG
Trigger: ACCTATCGAAAGCCAGCTTCAGGGCAGGACACTGTC...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTATGTCTGCAGCCCAGGTaGTCTGACATGCTTGTGGGC +
Preference number: 2 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLCLQPR*SDMLVG
Trigger: GCCCACAAGCATGTCAGATCACCTGGGCTGCAGACA...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GAGAGCGGGCAACAGGTAGTAACAGCCGGCCCTTCTCTCCCAGCACAGCGACTCGTCTGTCCCCAAGGCTaGATGCTGTCCTGGTGGTCC +
Preference number: 2 (lower is better)
Translates to: ESGQQVVTAGPSLPAQRLVCPQG*MLSWWS
Trigger: GGACCACCAGGACAGCATGCAGCCTTGGGGACAGAC...GAGTCGCTGTGCTGGGAGAGAAGGGCCGGCTGTTACTACCTGTTGCCCGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CATGGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTGGACCAGCCCTGTGGCTGCGCCTCCCTaGCCCACTTCCAGCTACCAC +
Preference number: 2 (lower is better)
Translates to: HGPLWLLLGITSSLWTSPVAAPP*PTSSYH
Trigger: GTGGTAGCTGGAAGTGGGGCAGGGAGGCGCAGCCAC...AGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCAAAAAATTTCTGCACTTaGTCAGGGAGGCCAGGAACC +
Preference number: 2 (lower is better)
Translates to: PEAFWSPGWAPVRPLQSPKNFCT*SGRPGT
Trigger: GGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTTT...TGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTAGCCTGGGCCTCTCTTaGAGATTTCGACTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGSLGLS*RFRLGL
Trigger: CAGACCCAGTCGAAATCTGCAAGAGAGGCCCAGGCT...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp GCCTGTAGTGGGCACTGGGCAGTAGGACCCTGTGGTGAGCCAGGTCTGCTCAGGCGTCTAGAAACCACTTaGAGGCCAGGCAGCCTTGGC +
Preference number: 2 (lower is better)
Translates to: ACSGHWAVGPCGEPGLLRRLETT*RPGSLG
Trigger: GCCAAGGCTGCCTGGCCTCCAAGTGGTTTCTAGACG...CCTGAGCAGACCTGGCTCACCACAGGGTCCTACTGCCCAGTGCCCACTACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGAGGGCCAGCACTTCTGGGAGATCAAGATGACCTCTCCCGTCTACGGCACCGATCTGGGCAGGTGGGGTaGACCTGGGGCTTATCCACC +
Preference number: 2 (lower is better)
Translates to: GGPALLGDQDDLSRLRHRSGQVG*TWGLST
Trigger: GGTGGATAAGCCCCAGGTCCACCCCACCTGCCCAGA...TCGGTGCCGTAGACGGGAGAGGTCATCTTGATCTCCCAGAAGTGCTGGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp CAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTTGTCCTGTGTGCCTGTAGTGGGCACTaGGCAGTAGGACCCTGTGGT +
Preference number: 2 (lower is better)
Translates to: QACLRARQCSTHVLLVLCACSGH*AVGPCG
Trigger: ACCACAGGGTCCTACTGCCCAGTGCCCACTACAGGC...ACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp CATGGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTGGACCAGCCCTACAGGCTCGTGGCTGTaGGATGCAGGCGTGCCTGCG +
Preference number: 2 (lower is better)
Translates to: HGPLWLLLGITSSLWTSPTGSWL*DAGVPA
Trigger: CGCAGGCACGCCTGCATCCCACAGCCACGAGCCTGT...AGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp ACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTTGTCCTCTGTCACCATaGGCCGTGTCCTTCCGGGGC +
Preference number: 2 (lower is better)
Translates to: TFTWKLVAPMSWSPVASPCPLSP*AVSFRG
Trigger: GCCCCGGAAGGACACGGCCCATGGTGACAGAGGACA...AGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp ACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTGCTGTTCCGGCTCAGGCCCCTCCACATCCTTaGGAGTCCCCTACTGCTTCT +
Preference number: 2 (lower is better)
Translates to: TWCCSLLSQLPCAAVPAQAPPHP*ESPTAS
Trigger: AGAAGCAGTAGGGGACTCCCAAGGATGTGGAGGGGC...CTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CAA 90 bp TGCAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTaGTCCTGTGTCACCAAATGGGCCTGCAGTCTGTTGTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: CRRACGLGSVRHMCC*SCVTKWACSLLWAG
Trigger: TCCTGCCCACAACAGACTGCAGGCCCATTTGGTGACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp ACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTGCTGTTCCGGCTCAGAACACCCACATGGCGTaGGCTGAAACGTATCCGTGC +
Preference number: 2 (lower is better)
Translates to: TWCCSLLSQLPCAAVPAQNTHMA*AETYPC
Trigger: GCACGGATACGTTTCAGCTCACGCCATGTGGGTGTT...CTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR GCA 90 bp CATGGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTGGACCAGCCCTGGTCTTGTGGGAGGCTaGGAGGACGAGAGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: HGPLWLLLGITSSLWTSPGLVGG*EDESLA
Trigger: AGCCAGGCTCTCGTCCTCGCAGCCTCCCACAAGACC...AGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACGCTCTAGGGCCCCTCTaGTGCTGTGCTGGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHALGPL*CCAGWG
Trigger: TCCCCACCCAGCACAGCAGCAGAGGGGCCCTAGAGC...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp CCCAGGCCTCCTCCACCACAAGGGCGACAAGACCAGCTTCTCATCGCGGTTCGGACTTCCCAGTGGAACTaGCTTCTTGGGCTGGGACAG +
Preference number: 2 (lower is better)
Translates to: PRPPPPQGRQDQLLIAVRTSQWN*LLGLGQ
Trigger: CTGTCCCAGCCCAAGAAGGCAGTTCCACTGGGAAGT...CCGAACCGCGATGAGAAGCTGGTCTTGTCGCCCTTGTGGTGGAGGAGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR GCA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACGTGACAGCTGAAACCTaGACCAGGAGGGGCGGGGCC +
Preference number: 2 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHVTAET*TRRGGA
Trigger: GGCCCCGCCCCTCCTGGTGCAGGTTTCAGCTGTCAC...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTAGTCACCAAATGGGCCTaGAGTCTGTTGTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLVTKWA*SLLWAG
Trigger: TCCTGCCCACAACAGACTGCAGGCCCATTTGGTGAC...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGCACATGGAGTACAGCTaGGGCACAGCGGCCATCCGG +
Preference number: 2 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPHMEYS*GTAAIR
Trigger: CCGGATGGCCGCTGTGCCGCAGCTGTACTCCATGTG...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp ACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTAAGTCCCTGGAGGCCTaGACCCCCATCCTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: TFTWKLVAPMSWSPVASPKSLEA*TPILSW
Trigger: CCAGGAAAGGATGGGGGTCCAGGCCTCCAGGGACTT...AGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp CCACAAGGGCGACAAGACCAGCTTCTCATCGCGGTTCGGCCAGGGCTCCATCATAAGTCCCTGGAGGCCTaGACCCCCATCCTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: PQGRQDQLLIAVRPGLHHKSLEA*TPILSW
Trigger: CCAGGAAAGGATGGGGGTCCAGGCCTCCAGGGACTT...ATGATGGAGCCCTGGCCGAACCGCGATGAGAAGCTGGTCTTGTCGCCCTTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGCCTGGTCATGCAGAATaGGGCAGAGCCGGAGCCCGT +
Preference number: 2 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPPGHAE*GRAGAR
Trigger: ACGGGCTCCGGCTCTGCCCCATTCTGCATGACCAGG...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACCGCATTCAGAGGCCAGGCAGCCTTaGCTACTGCTCTGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: EARGPVQTWACLLDAPHSEARQP*LLLCGW
Trigger: CCAGCCACAGAGCAGTAGCCAAGGCTGCCTGGCCTC...TGAATGCGGTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTATGTCATGGTCCCCTGTaGCTTCTCCTGGGGATCACA +
Preference number: 2 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLCHGPL*LLLGIT
Trigger: TGTGATCCCCAGGAGAAGCCACAGGGGACCATGACA...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GTGAGCCAGGTCTGCTCAGGTAACAGGAAGGTCGTTGGGCCACAGTGTGGTGGGTCACCTGGAAGCTGGTaGCGCCCATGTCATGGTCCC +
Preference number: 2 (lower is better)
Translates to: VSQVCSGNRKVVGPQCGGSPGSW*RPCHGP
Trigger: GGGACCATGACATGGGCGCCACCAGCTTCCAGGTGA...CCCACCACACTGTGGCCCAACGACCTTCCTGTTACCTGAGCAGACCTGGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GAGAGCGGGCAACAGGTAGTAACAGCCGGCCCTTCTCTCCCAGCACAGCGACTCCGTTCACCTGGAAGCTaGTGGCGCCCATGTCATGGT +
Preference number: 2 (lower is better)
Translates to: ESGQQVVTAGPSLPAQRLRSPGS*WRPCHG
Trigger: ACCATGACATGGGCGCCACCAGCTTCCAGGTGAACG...GAGTCGCTGTGCTGGGAGAGAAGGGCCGGCTGTTACTACCTGTTGCCCGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGAGGGCCAGCACTTCTGGGAGATCAAGATGACCTCTCCCGTCTACGGCACCGAGCCTTGTCTGTGGGGTaGGGCCATCCCCTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: GGPALLGDQDDLSRLRHRALSVG*GHPLQK
Trigger: TTTCTGGAGGGGATGGCCCCACCCCACAGACAAGGC...TCGGTGCCGTAGACGGGAGAGGTCATCTTGATCTCCCAGAAGTGCTGGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp CATGGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTGGACCAGCCCTGGTCTACCCTGGCTCTaGGGACCCGCACTTCTAGGC +
Preference number: 2 (lower is better)
Translates to: HGPLWLLLGITSSLWTSPGLPWL*GPALLG
Trigger: GCCTAGAAGTGCGGGTCCCCAGAGCCAGGGTAGACC...AGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp CACACAGCCTCAGGGGTGACAGGACCTCAGAACACACTGCATTCTTCACTGTGCCAGGGAACCCGGCCCTaGGCCTGCAGTGCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: HTASGVTGPQNTLHSSLCQGTRP*ACSAGA
Trigger: AGCACCTGCACTGCAGGCCCAGGGCCGGGTTCCCTG...GCACAGTGAAGAATGCAGTGTGTTCTGAGGTCCTGTCACCCCTGAGGCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR TCA 90 bp GTGAGCCAGGTCTGCTCAGGTAACAGGAAGGTCGTTGGGCCACAGTGTGGTGGGAGTAGGACCCTGTGGTaGGCCAGGTCTGCTCAGGTA +
Preference number: 2 (lower is better)
Translates to: VSQVCSGNRKVVGPQCGGSRTLW*ARSAQV
Trigger: TACCTGAGCAGACCTGGCTCACCACAGGGTCCTACT...CCCACCACACTGTGGCCCAACGACCTTCCTGTTACCTGAGCAGACCTGGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACCGCATTCACTAACTTGCTCTGCATaGTGTCAGCGGCTGCCCCGC +
Preference number: 2 (lower is better)
Translates to: EARGPVQTWACLLDAPHSLTCSA*CQRLPR
Trigger: GCGGGGCAGCCGCTGACAGCATGCAGAGCAAGTTAG...TGAATGCGGTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp CATGGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTGGACCAGCCCTCTAACTTGCTCTGCATaGTGTCAGCGGCTGCCCCGC +
Preference number: 2 (lower is better)
Translates to: HGPLWLLLGITSSLWTSPLTCSA*CQRLPR
Trigger: GCGGGGCAGCCGCTGACAGCATGCAGAGCAAGTTAG...AGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTATTTCCTAACTTGCTCTaGATGCTGTCAGCGGCTGCC +
Preference number: 2 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLFPNLL*MLSAAA
Trigger: GGCAGCCGCTGACAGCATGCAGAGCAAGTTAGGAAA...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCAGGTGTTTGTCTGTCTaGAGCCCAGGTGATCTGACA +
Preference number: 2 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPRCLSV*SPGDLT
Trigger: TGTCAGATCACCTGGGCTGCAGACAGACAAACACCT...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GTGAGCCAGGTCTGCTCAGGTAACAGGAAGGTCGTTGGGCCACAGTGTGGTGGGTCTTGCTCCCGAGGCTaGGACAGTCCTTTCTGTGGG +
Preference number: 2 (lower is better)
Translates to: VSQVCSGNRKVVGPQCGGSCSRG*DSPFCG
Trigger: CCCACAGAAAGGACTGTCCCAGCCTCGGGAGCAAGA...CCCACCACACTGTGGCCCAACGACCTTCCTGTTACCTGAGCAGACCTGGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp TCTAGATTCTTTCCACCATGGCCAGACGCCCCCGGAACAGCAGGGCCTGGCACTCGTTCACCTGGAAGCTaGTGGCGCCCATGTCATGGT +
Preference number: 2 (lower is better)
Translates to: SRFFPPWPDAPGTAGPGTRSPGS*WRPCHG
Trigger: ACCATGACATGGGCGCCACCAGCTTCCAGGTGAACG...AGTGCCAGGCCCTGCTGTTCCGGGGGCGTCTGGCCATGGTGGAAAGAATCTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCGATCTGACATGCTTGTaGGCTTTGCAGGCAGAGCTA +
Preference number: 2 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPDLTCL*ALQAEL
Trigger: TAGCTCTGCCTGCAAAGCCCACAAGCATGTCAGATC...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTTCGGGACGTCGGATGTaGACCTGGACAAATACCGCC +
Preference number: 2 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPSGRRM*TWTNTA
Trigger: GGCGGTATTTGTCCAGGTCCACATCCGACGTCCCGA...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR TCA 90 bp TCTAGATTCTTTCCACCATGGCCAGACGCCCCCGGAACAGCAGGGCCTGGCACTTTGAGCCCAGGAGTTTaGGACCTGCCTGGGCAACAT +
Preference number: 2 (lower is better)
Translates to: SRFFPPWPDAPGTAGPGTLSPGV*DLPGQH
Trigger: ATGTTGCCCAGGCAGGTCTCAAACTCCTGGGCTCAA...AGTGCCAGGCCCTGCTGTTCCGGGGGCGTCTGGCCATGGTGGAAAGAATCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR TCA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGCCACATGGCGTGAGCTaGAACGTATCCGTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPPHGVS*NVSVQR
Trigger: CCTCTGCACGGATACGTTTCAGCTCACGCCATGTGG...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR GCA 90 bp CCCAGGCCTCCTCCACCACAAGGGCGACAAGACCAGCTTCTCATCGCGGTTCGGCGGTTTTTCCTAACTTaGTCTGCATGCTGTCAGCGG +
Preference number: 2 (lower is better)
Translates to: PRPPPPQGRQDQLLIAVRRFFLT*SACCQR
Trigger: CCGCTGACAGCATGCAGAGCAAGTTAGGAAAAACCG...CCGAACCGCGATGAGAAGCTGGTCTTGTCGCCCTTGTGGTGGAGGAGGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR GCA 90 bp GAGAGCGGGCAACAGGTAGTAACAGCCGGCCCTTCTCTCCCAGCACAGCGACTCGAAAGGACAGTGTCCTaGCCTGAAGCTGGCTTTCGA +
Preference number: 2 (lower is better)
Translates to: ESGQQVVTAGPSLPAQRLERTVS*PEAGFR
Trigger: TCGAAAGCCAGCTTCAGGGCAGGACACTGTCCTTTC...GAGTCGCTGTGCTGGGAGAGAAGGGCCGGCTGTTACTACCTGTTGCCCGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTGTTCGACACATGTGCTaGTTGTCCTGTGTCACCAAA +
Preference number: 2 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGVRHMC*LSCVTK
Trigger: TTTGGTGACACAGGACAAGCAGCACATGTGTCGAAC...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp CACACAGCCTCAGGGGTGACAGGACCTCAGAACACACTGCATTCTTCACTGTGCCTGTCACAGCTCCCCTaGGCTGCTGTTCCGGCTCAG +
Preference number: 2 (lower is better)
Translates to: HTASGVTGPQNTLHSSLCLSQLP*AAVPAQ
Trigger: CTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAG...GCACAGTGAAGAATGCAGTGTGTTCTGAGGTCCTGTCACCCCTGAGGCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp GCCTGTAGTGGGCACTGGGCAGTAGGACCCTGTGGTGAGCCAGGTCTGCTCAGGTGGCAGCCACCAAGCTaGAGAACAAGAGATTCTACC +
Preference number: 2 (lower is better)
Translates to: ACSGHWAVGPCGEPGLLRWQPPS*RTRDST
Trigger: GGTAGAATCTCTTGTTCTGCAGCTTGGTGGCTGCCA...CCTGAGCAGACCTGGCTCACCACAGGGTCCTACTGCCCAGTGCCCACTACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp CAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTTGTCCTGTGTGAGGGCCAGCACTTCTaGGAGATCAAGATGACCTCT +
Preference number: 2 (lower is better)
Translates to: QACLRARQCSTHVLLVLCEGQHF*EIKMTS
Trigger: AGAGGTCATCTTGATCTCCCAGAAGTGCTGGCCCTC...ACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR TCA 90 bp TTCGACTGGGTCTGGGATGACTTAAATAAGTCATCAGCCACCCTGCTGAGCTGTCGGGTGACTGTAGCGTaGGGTCTGAGGGGCTGCGCC +
Preference number: 2 (lower is better)
Translates to: FDWVWDDLNKSSATLLSCRVTVA*GLRGCA
Trigger: GGCGCAGCCCCTCAGACCTCACGCTACAGTCACCCG...ACAGCTCAGCAGGGTGGCTGATGACTTATTTAAGTCATCCCAGACCCAGTCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR GCA 90 bp AGGCAGGCAGGCAGACATTACCTGAACACGGAATCAGTCGGAGAAAAAGATGCTACCGCCTGCGCCAGCTaGGGCCAGACTCGGGAGACA +
Preference number: 2 (lower is better)
Translates to: RQAGRHYLNTESVGEKDATACAS*GQTRET
Trigger: TGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGCGGT...AGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCCTGCCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp GAGAGCGGGCAACAGGTAGTAACAGCCGGCCCTTCTCTCCCAGCACAGCGACTCAGTGTTCGACACATGTaGTGCTTGTCCTGTGTCACC +
Preference number: 2 (lower is better)
Translates to: ESGQQVVTAGPSLPAQRLSVRHM*CLSCVT
Trigger: GGTGACACAGGACAAGCAGCACATGTGTCGAACACT...GAGTCGCTGTGCTGGGAGAGAAGGGCCGGCTGTTACTACCTGTTGCCCGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp CATGGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTGGACCAGCCCTCACAACAAGCTGGGCTaGGTCCTGAGCATGAGTTGC +
Preference number: 2 (lower is better)
Translates to: HGPLWLLLGITSSLWTSPHNKLG*VLSMSC
Trigger: GCAACTCATGCTCAGGACCCAGCCCAGCTTGTTGTG...AGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACCGCACTTCTAGGCAGTaGGGTAGAGTTGTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHRTSRQ*GRVVWA
Trigger: GGCCCAGACAACTCTACCCCACTGCCTAGAAGTGCG...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp AAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTGAAGGTATTCAGAACAGCGAGGCCAGGCTGGAGTaGCAGGGCCAGCGCGTGCAC +
Preference number: 2 (lower is better)
Translates to: KISALAQGGQEPEGIQNSEARLE*QGQRVH
Trigger: GTGCACGCGCTGGCCCTGCCACTCCAGCCTGGCCTC...GCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp TTCGACTGGGTCTGGGATGACTTAAATAAGTCATCAGCCACCCTGCTGAGCTGTGGCCCAGGGTGCTTCTaGGGAACCTGGCTCCGGCAG +
Preference number: 2 (lower is better)
Translates to: FDWVWDDLNKSSATLLSCGPGCF*GTWLRQ
Trigger: CTGCCGGAGCCAGGTTCCCCAGAAGCACCCTGGGCC...ACAGCTCAGCAGGGTGGCTGATGACTTATTTAAGTCATCCCAGACCCAGTCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR GCA 90 bp ATTGTTAACTTGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGTACAAACGCACTGCCGCCGATGGTGTaGTCCACGGCGGCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: IVNLLVVLPDASSASTNALPPMV*STAARS
Trigger: GCTCCGGGCCGCCGTGGAGCACACCATCGGCGGCAG...TGCGTTTGTACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp GAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACCGCATTCATCCTGTGTCACCAAATaGGCCTGCAGTCTGTTGTGG +
Preference number: 2 (lower is better)
Translates to: EARGPVQTWACLLDAPHSSCVTK*ACSLLW
Trigger: CCACAACAGACTGCAGGCCCATTTGGTGACACAGGA...TGAATGCGGTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp CACACAGCCTCAGGGGTGACAGGACCTCAGAACACACTGCATTCTTCACTGTGCACAGGTCATGTGCCCTaGAGCAGTCTCTCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: HTASGVTGPQNTLHSSLCTGHVP*SSLSWP
Trigger: AGGCCAGGAGAGACTGCTCCAGGGCACATGACCTGT...GCACAGTGAAGAATGCAGTGTGTTCTGAGGTCCTGTCACCCCTGAGGCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR TCA 90 bp TTCGACTGGGTCTGGGATGACTTAAATAAGTCATCAGCCACCCTGCTGAGCTGTCGGCGAGTCCTTCTGTaGCTGTGCTGGGCAGAGCGA +
Preference number: 2 (lower is better)
Translates to: FDWVWDDLNKSSATLLSCRRVLL*LCWAER
Trigger: TCGCTCTGCCCAGCACAGTCACAGAAGGACTCGCCG...ACAGCTCAGCAGGGTGGCTGATGACTTATTTAAGTCATCCCAGACCCAGTCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR TCA 90 bp AAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTGAAGGTATTCAGAACAGCGCGCTCGGGGTACTGTaGAGTCCCTGGAGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: KISALAQGGQEPEGIQNSALGVL*SPWRPG
Trigger: TCCAGGCCTCCAGGGACTTCACAGTACCCCGAGCGC...GCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR TCA 90 bp CACACAGCCTCAGGGGTGACAGGACCTCAGAACACACTGCATTCTTCACTGTGCGGGAGGCCAGGAACCTaGAGGTATTCAGAACAGCTC +
Preference number: 2 (lower is better)
Translates to: HTASGVTGPQNTLHSSLCGRPGT*RYSEQL
Trigger: GAGCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCC...GCACAGTGAAGAATGCAGTGTGTTCTGAGGTCCTGTCACCCCTGAGGCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp AAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTGAAGGTATTCAGAACAGCTCTCCTGGAGCTCCCTaGTCCAGCCAGGGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: KISALAQGGQEPEGIQNSSPGAP*SSQGEA
Trigger: GGCCTCTCCCTGGCTGGAGCAGGGAGCTCCAGGAGA...GCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp AGGCAGGCAGGCAGACATTACCTGAACACGGAATCAGTCGGAGAAAAAGATGCTACCGCCCAGGGTGTCTaGTCTGTCCCCAAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: RQAGRHYLNTESVGEKDATAQGV*SVPKAA
Trigger: TGCAGCCTTGGGGACAGACCAGACACCCTGGGCGGT...AGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCCTGCCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp GGCAGACATTACCTGAACACGGAATCAGTCGGAGAAAAAGATGCTTCTGAGGCTGGACGAGAGCCTGGCTaGAGCCCGCGTTGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: GRHYLNTESVGEKDASEAGREPG*SPRCCS
Trigger: GGAACAGCAACGCGGGCTCCAGCCAGGCTCTCGTCC...AGCCTCAGAAGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGATCACATCATCTCTCTaGACCAGCCCTCAACCCTCA +
Preference number: 2 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPITSSL*TSPQPS
Trigger: TGAGGGTTGAGGGCTGGTCCAGAGAGATGATGTGAT...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGCAGACATTACCTGAACACGGAATCAGTCGGAGAAAAAGATGCTTCTGAGGCTGCAGGGTCATGGCTGTaGGACGCGGGCGTGTCCACA +
Preference number: 2 (lower is better)
Translates to: GRHYLNTESVGEKDASEAAGSWL*DAGVST
Trigger: TGTGGACACGCCCGCGTCCCACAGCCATGACCCTGC...AGCCTCAGAAGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp GGTGGGAGGAGGCCAAGAATCAGGACCAAGGAGAACTTCAGTGAAGCAAAAGAAGTCCCCTACTGCTTCTaGCTGAGGGTGCCACACCCC +
Preference number: 2 (lower is better)
Translates to: GGRRPRIRTKENFSEAKEVPYCF*LRVPHP
Trigger: GGGGTGTGGCACCCTCAGCCAGAAGCAGTAGGGGAC...TTCTTTTGCTTCACTGAAGTTCTCCTTGGTCCTGATTCTTGGCCTCCTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTTGTCTAACACCCACATaGCGTGAGCTGAAACGTATC +
Preference number: 2 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPCLTPT*RELKRI
Trigger: GATACGTTTCAGCTCACGCCATGTGGGTGTTAGACA...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR TCA 90 bp AAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTGAAGGTATTCAGAACAGCCCTACTGCTTCTGGCTaGGGGTGCCACACCCCAAGC +
Preference number: 2 (lower is better)
Translates to: KISALAQGGQEPEGIQNSPTASG*GCHTPS
Trigger: GCTTGGGGTGTGGCACCCTCAGCCAGAAGCAGTAGG...GCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR GCA 90 bp GGTGGGAGGAGGCCAAGAATCAGGACCAAGGAGAACTTCAGTGAAGCAAAAGAAGAGGGAGCCATCTCTTaGTCCCGAGGCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: GGRRPRIRTKENFSEAKEEGAIS*SRGWDS
Trigger: ACTGTCCCAGCCTCGGGAGCAAGAGATGGCTCCCTC...TTCTTTTGCTTCACTGAAGTTCTCCTTGGTCCTGATTCTTGGCCTCCTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp TTCGACTGGGTCTGGGATGACTTAAATAAGTCATCAGCCACCCTGCTGAGCTGTGAACCGCCAGCCATCTaGCAGCCAGAAGCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: FDWVWDDLNKSSATLLSCEPPAI*QPEAPL
Trigger: AAGAGGGGCTTCTGGCTGGCAGATGGCTGGCGGTTC...ACAGCTCAGCAGGGTGGCTGATGACTTATTTAAGTCATCCCAGACCCAGTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp ATTGTTAACTTGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGTACAAACGCACTGAGGGCAGCTGCCTaGCCTGACGGGCGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: IVNLLVVLPDASSASTNALRAAA*PDGRSE
Trigger: CTCACTGCGCCCGTCAGGCCAGGCAGCTGCCCTCAG...TGCGTTTGTACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp GGTGGGAGGAGGCCAAGAATCAGGACCAAGGAGAACTTCAGTGAAGCAAAAGAACCTGGAGCTGCCTTCTaGTCCCTGCCGAGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: GGRRPRIRTKENFSEAKEPGAAF*SLPSVC
Trigger: ACACACACTCGGCAGGGACCAGAAGGCAGCTCCAGG...TTCTTTTGCTTCACTGAAGTTCTCCTTGGTCCTGATTCTTGGCCTCCTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp TTCGACTGGGTCTGGGATGACTTAAATAAGTCATCAGCCACCCTGCTGAGCTGTAGGGATGAGGACAGCTaGGGCCTCTCCTACACGGGT +
Preference number: 2 (lower is better)
Translates to: FDWVWDDLNKSSATLLSCRDEDS*GLSYTG
Trigger: ACCCGTGTAGGAGAGGCCCCAGCTGTCCTCATCCCT...ACAGCTCAGCAGGGTGGCTGATGACTTATTTAAGTCATCCCAGACCCAGTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR TCA 90 bp AGGCAGGCAGGCAGACATTACCTGAACACGGAATCAGTCGGAGAAAAAGATGCTAGGTCAAGGCTGCAGTaGGCCGTGATCACACCAGTG +
Preference number: 2 (lower is better)
Translates to: RQAGRHYLNTESVGEKDARSRLQ*AVITPV
Trigger: CACTGGTGTGATCACGGCTCACTGCAGCCTTGACCT...AGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCCTGCCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp GGTGGGAGGAGGCCAAGAATCAGGACCAAGGAGAACTTCAGTGAAGCAAAAGAACATGCTGTCAGCGGCTaGCCCGCCGTCATAGACTTA +
Preference number: 2 (lower is better)
Translates to: GGRRPRIRTKENFSEAKEHAVSG*PAVIDL
Trigger: TAAGTCTATGACGGCGGGGCAGCCGCTGACAGCATG...TTCTTTTGCTTCACTGAAGTTCTCCTTGGTCCTGATTCTTGGCCTCCTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR GCA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACACCAGACGCTTCTTCTaGCAGTACAAACGCATACTC +
Preference number: 2 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHTRRFF*QYKRIL
Trigger: GAGTATGCGTTTGTACTGGCAGAAGAAGCGTCTGGT...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CAA 90 bp TGGGCCTGTCTCCTGGATGCACCGCATTCAGTAAGACTCTTTAATTaGGCAAAGGACACACACAGCCTCAGGGGTGACAGGACCTCAGAA +
Preference number: 2 (lower is better)
Translates to: WACLLDAPHSVRLFN*AKDTHSLRGDRTSE
Trigger: TTCTGAGGTCCTGTCACCCCTGAGGCTGTGTGTGTCCTTTGCCAAATTAAAGAGTCTTACTGAATGCGGTGCATCCAGGAGACAGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp AAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTGAAGGTATTCAGAACAGCTTGGGAGTCCCCTACTaGTTCTGGCTGAGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: KISALAQGGQEPEGIQNSLGVPY*FWLRVP
Trigger: TGGCACCCTCAGCCAGAAGCAGTAGGGGACTCCCAA...GCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp GGCAGACATTACCTGAACACGGAATCAGTCGGAGAAAAAGATGCTTCTGAGGCTCGTCTAGAAACCACTTaGAGGCCAGGCAGCCTTGGC +
Preference number: 2 (lower is better)
Translates to: GRHYLNTESVGEKDASEARLETT*RPGSLG
Trigger: GCCAAGGCTGCCTGGCCTCCAAGTGGTTTCTAGACG...AGCCTCAGAAGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp CACACAGCCTCAGGGGTGACAGGACCTCAGAACACACTGCATTCTTCACTGTGCGAAACACATGGTGCATaGAGAGGTTGGCAGTTGCTT +
Preference number: 2 (lower is better)
Translates to: HTASGVTGPQNTLHSSLCETHGA*RGWQLL
Trigger: AAGCAACTGCCAACCTCTCCATGCACCATGTGTTTC...GCACAGTGAAGAATGCAGTGTGTTCTGAGGTCCTGTCACCCCTGAGGCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR GCA 90 bp TTCGACTGGGTCTGGGATGACTTAAATAAGTCATCAGCCACCCTGCTGAGCTGTGAAAGGACAGTGTCCTaGCCTGAAGCTGGCTTTCGA +
Preference number: 2 (lower is better)
Translates to: FDWVWDDLNKSSATLLSCERTVS*PEAGFR
Trigger: TCGAAAGCCAGCTTCAGGGCAGGACACTGTCCTTTC...ACAGCTCAGCAGGGTGGCTGATGACTTATTTAAGTCATCCCAGACCCAGTCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CCA 90 bp AAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTGAAGGTATTCAGAACAGCCCCTGTGGCTTCTCCTaGGGATCACATCATCTCTCT +
Preference number: 2 (lower is better)
Translates to: KISALAQGGQEPEGIQNSPCGFS*GSHHLS
Trigger: AGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGG...GCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CCA 90 bp ATTGTTAACTTGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGTACAAACGCATGGGGTAGAGTTGTCTaGGCCTGCCTTGTCTGTGGG +
Preference number: 2 (lower is better)
Translates to: IVNLLVVLPDASSASTNAWGRVV*ACLVCG
Trigger: CCCACAGACAAGGCAGGCCCAGACAACTCTACCCCA...TGCGTTTGTACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CAA 90 bp TTCTCCTCTGAAACACATGGTGCATGGAGAGGTTGGCAGTTGCTTTaGGTTCATTCAACAGAAATTCTCCACTACGGGGCTGGGCACTGT +
Preference number: 2 (lower is better)
Translates to: FSSETHGAWRGWQLL*VHSTEILHYGAGHC
Trigger: ACAGTGCCCAGCCCCGTAGTGGAGAATTTCTGTTGAATGAACCAAAAGCAACTGCCAACCTCTCCATGCACCATGTGTTTCAGAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CAA 90 bp TGTGCTTTCTCCTCTGAAACACATGGTGCATGGAGAGGTTGGCAGTaGCTTTTGGTTCATTCAACAGAAATTCTCCACTACGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: CAFSSETHGAWRGWQ*LLVHSTEILHYGAG
Trigger: CCCAGCCCCGTAGTGGAGAATTTCTGTTGAATGAACCAAAAGCAACTGCCAACCTCTCCATGCACCATGTGTTTCAGAGGAGAAAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CCA 90 bp AAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTGAAGGTATTCAGAACAGCATCACATCATCTCTCTaGACCAGCCCTCAACCCTCA +
Preference number: 2 (lower is better)
Translates to: KISALAQGGQEPEGIQNSITSSL*TSPQPS
Trigger: TGAGGGTTGAGGGCTGGTCCAGAGAGATGATGTGAT...GCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CAA 90 bp TTCTTTGGTTTACCCAGCCCATTTCTGGAGGTGACCATTGTTAACTaGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGTACAAACGCA +
Preference number: 2 (lower is better)
Translates to: FFGLPSPFLEVTIVN*LVVLPDASSASTNA
Trigger: TGCGTTTGTACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAATGGTCACCTCCAGAAATGGGCTGGGTAAACCAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 72 bp GCCTGCGCCAGCTGCGGCCAGACTCGGGAGACACGCTaGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGG +
Preference number: 3 (lower is better)
Translates to: ACASCGQTRETR*RVCRCRRASSR
Trigger: CCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR TCA 72 bp GACGCCCCCGGAACAGCAGGGCCTGGCACTTCGTCCTaGGTGCAGCCCGCCGAGACGCAGATGCCCGGGCCG +
Preference number: 3 (lower is better)
Translates to: DAPGTAGPGTSS*VQPAETQMPGP
Trigger: CGGCCCGGGCATCTGCGTCTCGGCGGGCTGCACTCAGGACGAAGTGCCAGGCCCTGCTGTTCCGGGGGCGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR GCA 72 bp CCCCCGGAACAGCAGGGCCTGGCACTTCGTCCTGAGTaGAGCCCGCCGAGACGCAGATGCCCGGGCCGTGGC +
Preference number: 3 (lower is better)
Translates to: PPEQQGLALRPE*SPPRRRCPGRG
Trigger: GCCACGGCCCGGGCATCTGCGTCTCGGCGGGCTGCACTCAGGACGAAGTGCCAGGCCCTGCTGTTCCGGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CAA 90 bp GCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGCACTCCAGGGCGGAGTaGGATGAGGCCCGTCCGGAG +
Preference number: 3 (lower is better)
Translates to: ASCGQTRETRWRVCRCRRHSRAE*DEARPE
Trigger: CTCCGGACGGGCCTCATCCAACTCCGCCCTGGAGTG...CCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CAA 90 bp CCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCACAGAGCCGGAGCCCGTaGGGAGGGAGCCTGGGCTGT +
Preference number: 3 (lower is better)
Translates to: PEAFWSPGWAPVRPLQSPQSRSP*GGSLGC
Trigger: ACAGCCCAGGCTCCCTCCCAACGGGCTCCGGCTCTG...TGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR GCA 72 bp CGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTaGAGTCCCCACTTTGAGTGGGTCCGTGGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: RSGALAGHRCGP*SPHFEWVRGPA
Trigger: GGCTGGGCCACGGACCCACTCAAAGTGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR GCA 72 bp AGCCTGCACTCGGCCCACCGGGGCAGGGACTGCCGCTaGGGAGAGGAAGACGAGTGTGAGCGTGGGGCCCAG +
Preference number: 3 (lower is better)
Translates to: SLHSAHRGRDCR*GEEDECERGAQ
Trigger: CTGGGCCCCACGCTCACACTCGTCTTCCTCTCCGCAGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 72 bp GTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTaGACTCGGCCCACCGGGGCAGGGACTGCCGCTGCG +
Preference number: 3 (lower is better)
Translates to: VLGRARPPSVAA*TRPTGAGTAAA
Trigger: CGCAGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR TCA 72 bp GGGCAGGGACTGCCGCTGCGGAGAGGAAGACGAGTGTaGGCGTGGGGCCCAGCCCCTGCTGGGACTGCACTG +
Preference number: 3 (lower is better)
Translates to: GQGLPLRRGRRV*AWGPAPAGTAL
Trigger: CAGTGCAGTCCCAGCAGGGGCTGGGCCCCACGCTCACACTCGTCTTCCTCTCCGCAGCGGCAGTCCCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 72 bp CGCTCCTGTGCCAGCGCCACTTCCCTCCAGTACCTGTaGTGCCACCGCCTGCGCCAGCTGCGGCCAGACTCG +
Preference number: 3 (lower is better)
Translates to: RSCASATSLQYL*CHRLRQLRPDS
Trigger: CGAGTCTGGCCGCAGCTGGCGCAGGCGGTGGCAGCACAGGTACTGGAGGGAAGTGGCGCTGGCACAGGAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp GTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTaGACTCGGCCCACCGGGGCAGGGACTGCCGCCGAT +
Preference number: 3 (lower is better)
Translates to: VLGRARPPSVAA*TRPTGAGTAAD
Trigger: ATCGGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 72 bp TGGCTGGGCCTCCAGGGCCCTCCTGGTCATGCAGAATaGGGCAGAGCCGGAGCCCGTTGGGAGGGAGCCTGG +
Preference number: 3 (lower is better)
Translates to: WLGLQGPPGHAE*GRAGARWEGAW
Trigger: CCAGGCTCCCTCCCAACGGGCTCCGGCTCTGCCCCATTCTGCATGACCAGGAGGGCCCTGGAGGCCCAGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CAA 90 bp CCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCAGGTCCTGAGCATGAGTaGCAGCCGCCGCAAGGCTCC +
Preference number: 3 (lower is better)
Translates to: PEAFWSPGWAPVRPLQSPGPEHE*QPPQGS
Trigger: GGAGCCTTGCGGCGGCTGCAACTCATGCTCAGGACC...TGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CAA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCGGAGGGAGCCATCTCTaGCTCCCGAGGCTGGGACAG +
Preference number: 3 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLGGSHL*LPRLGQ
Trigger: CTGTCCCAGCCTCGGGAGCAAGAGATGGCTCCCTCC...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp AGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTaGCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACA +
Preference number: 3 (lower is better)
Translates to: SCGQTRETRWRV*RCRRASSRCYT
Trigger: TGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp TCCTGTGCCAGCGCCACTTCCCTCCAGTACCTGTGCTaGCACCGCCTGCGCCAGCTGCGGCCAGACTCGGGA +
Preference number: 3 (lower is better)
Translates to: SCASATSLQYLC*HRLRQLRPDSG
Trigger: TCCCGAGTCTGGCCGCAGCTGGCGCAGGCGGTGGCAGCACAGGTACTGGAGGGAAGTGGCGCTGGCACAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp TGTAGCAGCCTGCACTCGGCCCACCGGGGCAGGGACTaGCGCTGCGGAGAGGAAGACGAGTGTGAGCGTGGG +
Preference number: 3 (lower is better)
Translates to: CSSLHSAHRGRD*RCGEEDECERG
Trigger: CCCACGCTCACACTCGTCTTCCTCTCCGCAGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CCA 72 bp GGGCAGGTAGGTTCCAGCGGGCGAGGCGGACGTGGCTaGCCTAAGGTGTGGAGATGCCCTAGGCAGGCAGGC +
Preference number: 3 (lower is better)
Translates to: GQVGSSGRGGRG*PKVWRCPRQAG
Trigger: GCCTGCCTGCCTAGGGCATCTCCACACCTTAGGCCAGCCACGTCCGCCTCGCCCGCTGGAACCTACCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 72 bp TCCACCATGGCCAGACGCCCCCGGAACAGCAGGGCCTaGCACTTCGTCCTGAGTGCAGCCCGCCGAGACGCA +
Preference number: 3 (lower is better)
Translates to: STMARRPRNSRA*HFVLSAARRDA
Trigger: TGCGTCTCGGCGGGCTGCACTCAGGACGAAGTGCCAGGCCCTGCTGTTCCGGGGGCGTCTGGCCATGGTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 72 bp ACCGACATGGTAAGTTGCTTCGGCCCAGGGTGCTTCTaGGGAACCTGGCTCCGGCAGCCCAGCCCCGCGCCC +
Preference number: 3 (lower is better)
Translates to: TDMVSCFGPGCF*GTWLRQPSPAP
Trigger: GGGCGCGGGGCTGGGCTGCCGGAGCCAGGTTCCCCAGAAGCACCCTGGGCCGAAGCAACTTACCATGTCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR TCA 72 bp CCACGCTGCCGCCATCCATCCCCAGTGCGGTGCCCGTaGCCGGCGAGTCCTTCTGTGACTGTGCTGGGCAGA +
Preference number: 3 (lower is better)
Translates to: PRCRHPSPVRCP*PASPSVTVLGR
Trigger: TCTGCCCAGCACAGTCACAGAAGGACTCGCCGGTCACGGGCACCGCACTGGGGATGGATGGCGGCAGCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp GGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTaGCGCCGGGCCTCAAGCAGGTGCTACACAACAAGC +
Preference number: 3 (lower is better)
Translates to: GQTRETRWRVCR*RRASSRCYTTS
Trigger: GCTTGTTGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp GGCGGCCCGGAGCAGCATGAAGGTCACCCGCTCCTGTaGCAGCGCCACTTCCCTCCAGTACCTGTGCTGCCA +
Preference number: 3 (lower is better)
Translates to: GGPEQHEGHPLL*QRHFPPVPVLP
Trigger: TGGCAGCACAGGTACTGGAGGGAAGTGGCGCTGGCACAGGAGCGGGTGACCTTCATGCTGCTCCGGGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp CTCCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTaGGGCCCCTGCAGTCCCCACTTTGAGTGGGTCCGT +
Preference number: 3 (lower is better)
Translates to: LLKRSGALAGHR*GPCSPHFEWVR
Trigger: ACGGACCCACTCAAAGTGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 72 bp GCCCGTCCGGAGGGAGCCATCTCTTGCTCCCGAGGCTaGGACAGTCCTTTCTGTGGGGGCTCTAGGGCCCCT +
Preference number: 3 (lower is better)
Translates to: ARPEGAISCSRG*DSPFCGGSRAP
Trigger: AGGGGCCCTAGAGCCCCCACAGAAAGGACTGTCCCAGCCTCGGGAGCAAGAGATGGCTCCCTCCGGACGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp GAATGGGGCAGAGCCGGAGCCCGTTGGGAGGGAGCCTaGGCTGTGCGCTCGGGGTACTGTGAAGTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: EWGRAGARWEGA*AVRSGYCEVPG
Trigger: TCCAGGGACTTCACAGTACCCCGAGCGCACAGCCCAGGCTCCCTCCCAACGGGCTCCGGCTCTGCCCCATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp GGGCCGTGTCCTTCCGGGGCGGCTGCTTGTGTGACCTaGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCT +
Preference number: 3 (lower is better)
Translates to: GPCPSGAAACVT*CCSLLSQLPCA
Trigger: AGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGTCACACAAGCAGCCGCCCCGGAAGGACACGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CAA 90 bp GCTCCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCTTGAGCCCAGGAGTTaGAGACCTGCCTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: APEAFWSPGWAPVRPLQSLEPRS*RPAWAT
Trigger: TGTTGCCCAGGCAGGTCTCAAACTCCTGGGCTCAAG...GGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR TCA 72 bp CCCTTCCTTCCAGCCACACTCCAGGGCGGAGTTGGATaGGGCCCGTCCGGAGGGAGCCATCTCTTGCTCCCG +
Preference number: 3 (lower is better)
Translates to: PFLPATLQGGVG*GPSGGSHLLLP
Trigger: CGGGAGCAAGAGATGGCTCCCTCCGGACGGGCCTCATCCAACTCCGCCCTGGAGTGTGGCTGGAAGGAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR TCA 72 bp GGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCTGACTaGCTTCCCAGTGGAACTGCCTTCTTGGGCTGGGAC +
Preference number: 3 (lower is better)
Translates to: GPARGSAAAGPD*LPSGTAFLGWD
Trigger: GTCCCAGCCCAAGAAGGCAGTTCCACTGGGAAGTCAGTCAGGTCCGGCGGCAGCGCTTCCTCTGGCAGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR TCA 72 bp CCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCTaGCTGACTTCCCAGTGGAACTGCCTTCTTGGGCTG +
Preference number: 3 (lower is better)
Translates to: PRPCQRKRCRRT*LTSQWNCLLGL
Trigger: CAGCCCAAGAAGGCAGTTCCACTGGGAAGTCAGTCAGGTCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp CTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTaGTGTTCCGGCTCAGCCAGGTGTCCTGGGAGGGGT +
Preference number: 3 (lower is better)
Translates to: LVLLSAVTAPLR*CSGSARCPGRG
Trigger: ACCCCTCCCAGGACACCTGGCTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp TACGGCACCGACATGGTAAGTTGCTTCGGCCCAGGGTaGTTCTGGGGAACCTGGCTCCGGCAGCCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: YGTDMVSCFGPG*FWGTWLRQPSP
Trigger: GGGGCTGGGCTGCCGGAGCCAGGTTCCCCAGAAGCACCCTGGGCCGAAGCAACTTACCATGTCGGTGCCGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CCA 72 bp CAGGTCACATGCCTGAGCCTCACAGGCTCGTGGCTGTaGGATGCAGGCGTGCCTGCGGGCTCGGCAGTGTTC +
Preference number: 3 (lower is better)
Translates to: QVTCLSLTGSWL*DAGVPAGSAVF
Trigger: GAACACTGCCGAGCCCGCAGGCACGCCTGCATCCCACAGCCACGAGCCTGTGAGGCTCAGGCATGTGACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CAA 90 bp CAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTTGTCCTGTGTCACTCCAGGGCGGAGTaGGATGAGGCCCGTCCGGAG +
Preference number: 3 (lower is better)
Translates to: QACLRARQCSTHVLLVLCHSRAE*DEARPE
Trigger: CTCCGGACGGGCCTCATCCAACTCCGCCCTGGAGTG...ACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CAA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTTTGTCTGGGCCTGCCTaGTCTGTGGGGTGGGGCCAT +
Preference number: 3 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGLSGPA*SVGWGH
Trigger: ATGGCCCCACCCCACAGACAAGGCAGGCCCAGACAA...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CAA 90 bp CCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAACAAGCTGGGCTGGGTCCTGTGCCCCTCCACATCCTaGGGAGTCCCCTACTGCTTC +
Preference number: 3 (lower is better)
Translates to: PLPPGLKQVLHNKLGWVLCPSTS*GVPYCF
Trigger: GAAGCAGTAGGGGACTCCCAAGGATGTGGAGGGGCA...CAGGACCCAGCCCAGCTTGTTGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CAA 90 bp CAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTTGTCCTGTGTCGCGTGCACCCTGCCTaGCCTCAGCTGTGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: QACLRARQCSTHVLLVLCRVHPA*PQLCQL
Trigger: CAGCTGGCACAGCTGAGGCAAGGCAGGGTGCACGCG...ACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 72 bp GAGTTGGATGAGGCCCGTCCGGAGGGAGCCATCTCTTaGTCCCGAGGCTGGGACAGTCCTTTCTGTGGGGGC +
Preference number: 3 (lower is better)
Translates to: ELDEARPEGAIS*SRGWDSPFCGG
Trigger: GCCCCCACAGAAAGGACTGTCCCAGCCTCGGGAGCAAGAGATGGCTCCCTCCGGACGGGCCTCATCCAACTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp GTGACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTaGGCTGCTGTTCCGGCTCAGCCAGGTGTCCTGGGA +
Preference number: 3 (lower is better)
Translates to: VTWCCSLLSQLP*AAVPAQPGVLG
Trigger: TCCCAGGACACCTGGCTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp CTGTGCGCTCGGGGTACTGTGAAGTCCCTGGAGGCCTaGACCCCCATCCTTTCCTGGGTGGGTCAGGGACAG +
Preference number: 3 (lower is better)
Translates to: LCARGTVKSLEA*TPILSWVGQGQ
Trigger: CTGTCCCTGACCCACCCAGGAAAGGATGGGGGTCCAGGCCTCCAGGGACTTCACAGTACCCCGAGCGCACAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp TCCAGCGGGCGAGGCGGACGTGGCTGGCCTAAGGTGTaGAGATGCCCTAGGCAGGCAGGCAGACATTACCTG +
Preference number: 3 (lower is better)
Translates to: SSGRGGRGWPKV*RCPRQAGRHYL
Trigger: CAGGTAATGTCTGCCTGCCTGCCTAGGGCATCTCCACACCTTAGGCCAGCCACGTCCGCCTCGCCCGCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CAA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTCCTGAGCCCCAGGTCTaGTGGGAGGCTGCGAGGACG +
Preference number: 3 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPPEPQV*WEAART
Trigger: CGTCCTCGCAGCCTCCCACAAGACCTGGGGCTCAGG...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CAA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCCCGTCTAGAAACCACTaGGAGGCCAGGCAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPPSRNH*EARQPW
Trigger: CCAAGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGG...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp GGGCGAGGCGGACGTGGCTGGCCTAAGGTGTGGAGATaGCCTAGGCAGGCAGGCAGACATTACCTGAACACG +
Preference number: 3 (lower is better)
Translates to: GRGGRGWPKVWR*PRQAGRHYLNT
Trigger: CGTGTTCAGGTAATGTCTGCCTGCCTGCCTAGGGCATCTCCACACCTTAGGCCAGCCACGTCCGCCTCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 72 bp CTGTCCCTTCCTTCCAGCCACACTCCAGGGCGGAGTTaGATGAGGCCCGTCCGGAGGGAGCCATCTCTTGCT +
Preference number: 3 (lower is better)
Translates to: LSLPSSHTPGRS*MRPVRREPSLA
Trigger: AGCAAGAGATGGCTCCCTCCGGACGGGCCTCATCCAACTCCGCCCTGGAGTGTGGCTGGAAGGAAGGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp CCGGGCCTCAAGCAGGTGCTACACAACAAGCTGGGCTaGGTCCTGAGCATGAGTTGCAGCCGCCGCAAGGCT +
Preference number: 3 (lower is better)
Translates to: PGLKQVLHNKLG*VLSMSCSRRKA
Trigger: AGCCTTGCGGCGGCTGCAACTCATGCTCAGGACCCAGCCCAGCTTGTTGTGTAGCACCTGCTTGAGGCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp GGCCTAGCAGGGAAGGTGTCCACACCATCTCAGCTCTaGGCAGGTGGGGTGGACCTGGGGCTTATCCACCGT +
Preference number: 3 (lower is better)
Translates to: GLAGKVSTPSQL*AGGVDLGLIHR
Trigger: ACGGTGGATAAGCCCCAGGTCCACCCCACCTGCCCAGAGCTGAGATGGTGTGGACACCTTCCCTGCTAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp GATGCCCGGGCCGTGGCTCTAGCAGGCTCCACTAACTaGGGCTACGACTCTGATGGGCAGGTAGGTTCCAGC +
Preference number: 3 (lower is better)
Translates to: DARAVALAGSTN*GYDSDGQVGSS
Trigger: GCTGGAACCTACCTGCCCATCAGAGTCGTAGCCCCAGTTAGTGGAGCCTGCTAGAGCCACGGCCCGGGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 72 bp CAGCTTCTCATCGCGGTTCGGCCAGGGCTCCATCATTaGCGTGCACCTGGACACCTGGCACGGCACACTCAC +
Preference number: 3 (lower is better)
Translates to: QLLIAVRPGLHH*RAPGHLARHTH
Trigger: GTGAGTGTGCCGTGCCAGGTGTCCAGGTGCACGCCAATGATGGAGCCCTGGCCGAACCGCGATGAGAAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CAA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGCCTGAGCCCCAGGTCTaGTGGGAGGCTGCGAGGACG +
Preference number: 3 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPPEPQV*WEAART
Trigger: CGTCCTCGCAGCCTCCCACAAGACCTGGGGCTCAGG...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CAA 90 bp GCTCCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCTGGTGCATGGAGAGGTaGGCAGTTGCTTTTGGTTCA +
Preference number: 3 (lower is better)
Translates to: APEAFWSPGWAPVRPLQSWCMER*AVAFGS
Trigger: TGAACCAAAAGCAACTGCCAACCTCTCCATGCACCA...GGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR-3UTR CAA 90 bp CATGGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTGGACCAGCCCTGGTCCTGAGCATGAGTaGCAGCCGCCGCAAGGCTCC +
Preference number: 3 (lower is better)
Translates to: HGPLWLLLGITSSLWTSPGPEHE*QPPQGS
Trigger: GGAGCCTTGCGGCGGCTGCAACTCATGCTCAGGACC...AGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp AGGCTGCGAGGACGAGAGCCTGGCTGGAGCCCGCGTTaGTGTTCCCACAGGGCCTCGGTTTTTCCTAACTTG +
Preference number: 3 (lower is better)
Translates to: RLRGREPGWSPR*CSHRASVFPNL
Trigger: CAAGTTAGGAAAAACCGAGGCCCTGTGGGAACAGCAACGCGGGCTCCAGCCAGGCTCTCGTCCTCGCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp GTCCACAGGCCAGGCCAGTGTCTGACACACGCATGCTaGTTGTCCTCTGTCACCATGGGCCGTGTCCTTCCG +
Preference number: 3 (lower is better)
Translates to: VHRPGQCLTHAC*LSSVTMGRVLP
Trigger: CGGAAGGACACGGCCCATGGTGACAGAGGACAAGCAGCATGCGTGTGTCAGACACTGGCCTGGCCTGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp TCGGATGTGGACCTGGACAAATACCGCCACACGTTCTaGAGCCTGCTGGGCAGGGATGAGGACAGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: SDVDLDKYRHTF*SLLGRDEDSWG
Trigger: GCCCCAGCTGTCCTCATCCCTGCCCAGCAGGCTGCAGAACGTGTGGCGGTATTTGTCCAGGTCCACATCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 72 bp GACAACCGTAAGGTCAGCTTCCACATGGAGTACAGCTaGGGCACAGCGGCCATCCGGGGCACCAAGGAGCTG +
Preference number: 3 (lower is better)
Translates to: DNRKVSFHMEYS*GTAAIRGTKEL
Trigger: CAGCTCCTTGGTGCCCCGGATGGCCGCTGTGCCGCAGCTGTACTCCATGTGGAAGCTGACCTTACGGTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 72 bp CGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTaGTTGTCCTGTGTCACCAAATGGGCCTGCAGTCTG +
Preference number: 3 (lower is better)
Translates to: RACGLGSVRHMC*LSCVTKWACSL
Trigger: CAGACTGCAGGCCCATTTGGTGACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp AGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTaGTGCTTGTCCTGTGTCACCAAATGGGCCTGCAGT +
Preference number: 3 (lower is better)
Translates to: RRACGLGSVRHM*CLSCVTKWACS
Trigger: ACTGCAGGCCCATTTGGTGACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp CGTGTCCACAGGCCAGGCCAGTGTCTGACACACGCATaGTGCTTGTCCTCTGTCACCATGGGCCGTGTCCTT +
Preference number: 3 (lower is better)
Translates to: RVHRPGQCLTHA*CLSSVTMGRVL
Trigger: AAGGACACGGCCCATGGTGACAGAGGACAAGCAGCATGCGTGTGTCAGACACTGGCCTGGCCTGTGGACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp ATGACCTCTCCCGTCTACGGCACCGACATGGTAAGTTaGTTCGGCCCAGGGTGCTTCTGGGGAACCTGGCTC +
Preference number: 3 (lower is better)
Translates to: MTSPVYGTDMVS*FGPGCFWGTWL
Trigger: GAGCCAGGTTCCCCAGAAGCACCCTGGGCCGAAGCAACTTACCATGTCGGTGCCGTAGACGGGAGAGGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CCA 72 bp GGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTaGGGATCACATCATCTCTCTGGACCAGCCCTCAAC +
Preference number: 3 (lower is better)
Translates to: GGAHVMVPCGFS*GSHHLSGPALN
Trigger: GTTGAGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATGACATGGGCGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp CCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTaGCTTCTCCTGGGGATCACATCATCTCTCTGGACC +
Preference number: 3 (lower is better)
Translates to: PGSWWRPCHGPL*LLLGITSSLWT
Trigger: GGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp GCCCTGAAGCTGGCTTTCGATAGGTCCACGTTCACCTaGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTG +
Preference number: 3 (lower is better)
Translates to: ALKLAFDRSTFT*KLVAPMSWSPV
Trigger: CACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGTGGACCTATCGAAAGCCAGCTTCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp CCTAGATGGTGGGCATCGGGACGTCGGATGTGGACCTaGACAAATACCGCCACACGTTCTGCAGCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: PRWWASGRRMWT*TNTATRSAACW
Trigger: CCAGCAGGCTGCAGAACGTGTGGCGGTATTTGTCCAGGTCCACATCCGACGTCCCGATGCCCACCATCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CAA 90 bp ACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTGCTGTTCCGGCTCAGCGACACATGTGCTGCTaGTCCTGTGTCACCAAATGG +
Preference number: 3 (lower is better)
Translates to: TWCCSLLSQLPCAAVPAQRHMCC*SCVTKW
Trigger: CCATTTGGTGACACAGGACAAGCAGCACATGTGTCG...CTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CAA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTACACACGCATGCTGCTaGTCCTCTGTCACCATGGGC +
Preference number: 3 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPTHACC*SSVTMG
Trigger: GCCCATGGTGACAGAGGACAAGCAGCATGCGTGTGT...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR TCA 72 bp GGGGCCATCCCCTCCAGAAAGGACAGTGTCCTGCCCTaGAGCTGGCTTTCGATAGGTCCACGTTCACCTGGA +
Preference number: 3 (lower is better)
Translates to: GAIPSRKDSVLP*SWLSIGPRSPG
Trigger: TCCAGGTGAACGTGGACCTATCGAAAGCCAGCTTCAGGGCAGGACACTGTCCTTTCTGGAGGGGATGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR GCA 72 bp ACCAAGCTGCAGAACAAGAGATTCTACCCGATGGTGTaGTCCACGGCGGCCCGGAGCAGCATGAAGGTCACC +
Preference number: 3 (lower is better)
Translates to: TKLQNKRFYPMV*STAARSSMKVT
Trigger: GGTGACCTTCATGCTGCTCCGGGCCGCCGTGGAGCACACCATCGGGTAGAATCTCTTGTTCTGCAGCTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 72 bp TGGGCCCCTCCCTTCCAGGTGTGGCAGCCACCAAGCTaGAGAACAAGAGATTCTACCCGATGGTGTGCTCCA +
Preference number: 3 (lower is better)
Translates to: WAPPFQVWQPPS*RTRDSTRWCAP
Trigger: TGGAGCACACCATCGGGTAGAATCTCTTGTTCTGCAGCTTGGTGGCTGCCACACCTGGAAGGGAGGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CCA 72 bp CCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTaGACCAGCCCTCAACCCTCACTGTCACAAGGCCTC +
Preference number: 3 (lower is better)
Translates to: PLWLLLGITSSL*TSPQPSLSQGL
Trigger: GAGGCCTTGTGACAGTGAGGGTTGAGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp TCCACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATaGTCCCCTGTGGCTTCTCCTGGGGATCACATCATC +
Preference number: 3 (lower is better)
Translates to: STFTWKLVAPMS*SPVASPGDHII
Trigger: GATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp TGGCTTTCGATAGGTCCACGTTCACCTGGAAGCTGGTaGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTG +
Preference number: 3 (lower is better)
Translates to: WLSIGPRSPGSW*RPCHGPLWLLL
Trigger: CAGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGTGGACCTATCGAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp AGCTGGCTTTCGATAGGTCCACGTTCACCTGGAAGCTaGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTC +
Preference number: 3 (lower is better)
Translates to: SWLSIGPRSPGS*WRPCHGPLWLL
Trigger: GAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGTGGACCTATCGAAAGCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp TTGTCTGTCTGCAGCCCAGGTGATCTGACATGCTTGTaGGCTTTGCAGGCAGAGCTACCTGCCCCCATGGCC +
Preference number: 3 (lower is better)
Translates to: LSVCSPGDLTCL*ALQAELPAPMA
Trigger: GGCCATGGGGGCAGGTAGCTCTGCCTGCAAAGCCCACAAGCATGTCAGATCACCTGGGCTGCAGACAGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp CCTGTTCCTAGATGGTGGGCATCGGGACGTCGGATGTaGACCTGGACAAATACCGCCACACGTTCTGCAGCC +
Preference number: 3 (lower is better)
Translates to: PVPRWWASGRRM*TWTNTATRSAA
Trigger: GGCTGCAGAACGTGTGGCGGTATTTGTCCAGGTCCACATCCGACGTCCCGATGCCCACCATCTAGGAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CAA 90 bp CCCAGGCCTCCTCCACCACAAGGGCGACAAGACCAGCTTCTCATCGCGGTTCGGTCGGTTTTTCCTAACTaGCTCTGCATGCTGTCAGCG +
Preference number: 3 (lower is better)
Translates to: PRPPPPQGRQDQLLIAVRSVFPN*LCMLSA
Trigger: CGCTGACAGCATGCAGAGCAAGTTAGGAAAAACCGA...CCGAACCGCGATGAGAAGCTGGTCTTGTCGCCCTTGTGGTGGAGGAGGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CAA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCGCAATAAATGTAGAGTaGATGTCTAACACCCACATG +
Preference number: 3 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLAINVE*MSNTHM
Trigger: CATGTGGGTGTTAGACATCAACTCTACATTTATTGC...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR CCA 72 bp AGGGGCACTGCCTCCCACAAGGAGCTCACGTTCTGGTaGGAGGAGGCCAAGAATCAGGACCAAGGAGAACTT +
Preference number: 3 (lower is better)
Translates to: RGTASHKELTFW*EEAKNQDQGEL
Trigger: AAGTTCTCCTTGGTCCTGATTCTTGGCCTCCTCCCACCAGAACGTGAGCTCCTTGTGGGAGGCAGTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp GGCCAGGGCTCCATCATTGGCGTGCACCTGGACACCTaGCACGGCACACTCACCTTTTTCAAGAACAGGAAG +
Preference number: 3 (lower is better)
Translates to: GQGSIIGVHLDT*HGTLTFFKNRK
Trigger: CTTCCTGTTCTTGAAAAAGGTGAGTGTGCCGTGCCAGGTGTCCAGGTGCACGCCAATGATGGAGCCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR GCA 72 bp CCCACAGGGCCTCGGTTTTTCCTAACTTGCTCTGCATaGTGTCAGCGGCTGCCCCGCCGTCATAGACTTAAA +
Preference number: 3 (lower is better)
Translates to: PTGPRFFLTCSA*CQRLPRRHRLK
Trigger: TTTAAGTCTATGACGGCGGGGCAGCCGCTGACAGCATGCAGAGCAAGTTAGGAAAAACCGAGGCCCTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CAA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGTCGGTTTTTCCTAACTaGCTCTGCATGCTGTCAGCG +
Preference number: 3 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPSVFPN*LCMLSA
Trigger: CGCTGACAGCATGCAGAGCAAGTTAGGAAAAACCGA...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR-3UTR CAA 90 bp TTCGACTGGGTCTGGGATGACTTAAATAAGTCATCAGCCACCCTGCTGAGCTGTCCGTCTAGAAACCACTaGGAGGCCAGGCAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: FDWVWDDLNKSSATLLSCPSRNH*EARQPW
Trigger: CCAAGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGG...ACAGCTCAGCAGGGTGGCTGATGACTTATTTAAGTCATCCCAGACCCAGTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR-3UTR CAA 90 bp AAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTGAAGGTATTCAGAACAGCTGGGCCTGCAGTCTGTaGTGGGCAGGAGGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: KISALAQGGQEPEGIQNSWACSL*WAGGRQ
Trigger: CTGCCTACCTCCTGCCCACAACAGACTGCAGGCCCA...GCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp AGGATCTACCTGGGTTTTATTGAGCTGCTCAGATCCTaGAGTGAGGTACGGGCTCCTGAAGCGTTCTGGAGC +
Preference number: 3 (lower is better)
Translates to: RIYLGFIELLRS*SEVRAPEAFWS
Trigger: GCTCCAGAACGCTTCAGGAGCCCGTACCTCACTCCAGGATCTGAGCAGCTCAATAAAACCCAGGTAGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CCA 72 bp AAAGATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTaGGCCTGTCTCCTGGATGCACCGCATTCAGTAAGA +
Preference number: 3 (lower is better)
Translates to: KDASEARGPVQT*ACLLDAPHSVR
Trigger: TCTTACTGAATGCGGTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR TCA 72 bp TGTGGAGATGCCCTAGGCAGGCAGGCAGACATTACCTaGACACGGAATCAGTCGGAGAAAAAGATGCTTCTG +
Preference number: 3 (lower is better)
Translates to: CGDALGRQADIT*TRNQSEKKMLL
Trigger: CAGAAGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCCTGCCTGCCTAGGGCATCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR TCA 72 bp ATAAATGTAGAGTTGATGTCTAACACCCACATGGCGTaGGCTGAAACGTATCCGTGCAGAGGCCGGGCTTGC +
Preference number: 3 (lower is better)
Translates to: INVELMSNTHMA*AETYPCRGRAC
Trigger: GCAAGCCCGGCCTCTGCACGGATACGTTTCAGCTCACGCCATGTGGGTGTTAGACATCAACTCTACATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
3UTR TCA 72 bp AAAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTaGAGGTATTCAGAACAGCTCAGGTGTTTGTCTGTC +
Preference number: 3 (lower is better)
Translates to: KNFCTCSGRPGT*RYSEQLRCLSV
Trigger: GACAGACAAACACCTGAGCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CCA 72 bp CTTCACTGTGCTTTCTCCTCTGAAACACATGGTGCATaGAGAGGTTGGCAGTTGCTTTTGGTTCATTCAACA +
Preference number: 3 (lower is better)
Translates to: LHCAFSSETHGA*RGWQLLLVHST
Trigger: TGTTGAATGAACCAAAAGCAACTGCCAACCTCTCCATGCACCATGTGTTTCAGAGGAGAAAGCACAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp CGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGCCACCTCCGGCCAGCTaGCGGCCACCTCGGCACCGG +
Preference number: 4 (lower is better)
Translates to: RPPQQSRASALPEEALPPPPPAS*RPPRHR
Trigger: CCGGTGCCGAGGTGGCCGTCAGCTGGCCGGAGGTGG...CGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CCAGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGTGCGCTCCCGCTCCGTaGTGCAGGCCTCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: PGSDLRPPQQSRASALPECAPAP*CRPPAP
Trigger: AGGCGCTGGAGGCCTGCAGCACGGAGCGGGAGCGCA...CTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCGCTGCCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCGCCGAGACGCAGATaGCCGGGCCGTGGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PTPAVASLGPARGSAAAGPPRRR*PGRGSS
Trigger: GCTAGAGCCACGGCCCGGGCATCTGCGTCTCGGCGG...TCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGCAGGGAACCCGGCCCTaGGCCTGCAGTGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RPPQQSRASALPEEALPPQGTRP*ACSAGA
Trigger: AGCACCTGCACTGCAGGCCCAGGGCCGGGTTCCCTG...CGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp CCTGCGCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGGGTGGGGGCCGTCCTaGGGTCTCCTGGAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PAPAAARLGRHAGGSAAAGWGPS*GLLELP
Trigger: AGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCC...GGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCAGGTCAGGCCCCACCCTaGGGGGACGCCCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPGQAPP*GDARLH
Trigger: GTGAAGGCGGGCGTCCCCGCAGGGTGGGGCCTGACC...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR GCA 90 bp GCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGCAGTGTGGTGGGGACTaGCCTGAGGCCGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ASCGQTRETRWRVCRCRRQCGGD*PEAGWL
Trigger: CAGCCACCCGGCCTCAGGGCAGTCCCCACCACACTG...CCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCTGGGTCCACATGTGGCTaGGGGTCCTCCCCCACCGCC +
Preference number: 4 (lower is better)
Translates to: TPAVASLGPARGSAAAGPGSTCG*GSSPTA
Trigger: GGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCC...AGGTCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGGACGAGAGCCTGGCTaGAGCCCGCGTTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RPPQQSRASALPEEALPPGREPG*SPRCCS
Trigger: GGAACAGCAACGCGGGCTCCAGCCAGGCTCTCGTCC...CGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCGGCCTCGCAGGGTCATaGCTGTGGGACGCGGGCGTG +
Preference number: 4 (lower is better)
Translates to: TSAHPSSREPRPCQRKRCGLAGS*LWDAGV
Trigger: CACGCCCGCGTCCCACAGCCATGACCCTGCGAGGCC...GCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CCAGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGCTGAGGGCAGCTGCCTaGCCTGACGGGCGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PGSDLRPPQQSRASALPELRAAA*PDGRSE
Trigger: CTCACTGCGCCCGTCAGGCCAGGCAGCTGCCCTCAG...CTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCGCTGCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp CGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTCCAGTGCGGTGCCCGTaGCCGGCGAGTCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RPPPTPAVASLGPARGSAPVRCP*PASPSV
Trigger: CACAGAAGGACTCGCCGGTCACGGGCACCGCACTGG...AGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCACACTGGCTCGCCGGCTaGCCAGCGCCCTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPHWLAG*PAPCCA
Trigger: TGCACAGCAGGGCGCTGGGCAGCCGGCGAGCCAGTG...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR GCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCAGGCCGCCTGCAGCCCTaGGCCGTCTCTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPGRLQP*AVSCHW
Trigger: CCAGTGGCAAGAGACGGCGCAGGGCTGCAGGCGGCC...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR GCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCACTCCGCCAGGCCGCCTaGAGCCCTGCGCCGTCTCTT +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPLRQAA*SPAPSL
Trigger: AAGAGACGGCGCAGGGCTGCAGGCGGCCTGGCGGAG...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR GCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCATGCGCTCCCGCTCCGTaGTGCAGGCCTCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPCAPAP*CRPPAP
Trigger: AGGCGCTGGAGGCCTGCAGCACGGAGCGGGAGCGCA...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR GCA 90 bp GCTCCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCACACGCTGGAGGGTCTaGCGCTGCCGCCGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: APEAFWSPGWAPVRPLQSTRWRV*RCRRAS
Trigger: TGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGT...GGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCAGCCGTCTCTTGCCACTaGCTCGCCGGCTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPAVSCH*LAGCPA
Trigger: CGCTGGGCAGCCGGCGAGCCAGTGGCAAGAGACGGC...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR CCA 90 bp ACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCTGACGCCCGCCTTCACTaGGCGGCACAGGAAGGTCGG +
Preference number: 4 (lower is better)
Translates to: TPAVASLGPARGSAAAGPDARLH*AAQEGR
Trigger: CCGACCTTCCTGTGCCGCCCAGTGAAGGCGGGCGTC...AGGTCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCAGGGTCCACATGTGGCTaGGGGTCCTCCCCCACCGCC +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPGSTCG*GSSPTA
Trigger: GGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCC...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR CCA 90 bp ACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCTGCGAGGACGAGAGCCTaGCTGGAGCCCGCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TPAVASLGPARGSAAAGPARTRA*LEPALL
Trigger: CAGCAACGCGGGCTCCAGCCAGGCTCTCGTCCTCGC...AGGTCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCATGCCCTGAGGCCGGGTaGCTGCAGCTGGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PEAFWSPGWAPVRPLQSPCPEAG*LQLGLV
Trigger: CACCAGGCCCAGCTGCAGCCACCCGGCCTCAGGGCA...TGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGGTCCATTCAGCCCCTaGGTGGCCCCCACACAGTCT +
Preference number: 4 (lower is better)
Translates to: RPPQQSRASALPEEALPPGPFSP*VAPTQS
Trigger: AGACTGTGTGGGGGCCACCCAGGGGCTGAATGGACC...CGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp GCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCACTGTGCCCGGGCTCCTaGCTCAGGGGGTCTACCCTG +
Preference number: 4 (lower is better)
Translates to: ARLGRHAGGSAAAAGPQALCPGS*LRGSTL
Trigger: CAGGGTAGACCCCCTGAGTCAGGAGCCCGGGCACAG...TGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGAGTCCCCAAGGCTGCATaGTGTCCTGGTGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: PTPAVASLGPARGSAAAGVPKAA*CPGGPT
Trigger: CGTGGGACCACCAGGACAGCATGCAGCCTTGGGGAC...TCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGGCAGGGGCTGGAGCCCGCGTTaGTGTTCCCACAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GQSEASFCSSLHSAHRGRGWSPR*CSHRAS
Trigger: CGAGGCCCTGTGGGAACAGCAACGCGGGCTCCAGCC...CCTGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCAGGGTGGGGAAGCGGCTaGCCTGAGCCCCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPGWGSG*PEPQVL
Trigger: CAAGACCTGGGGCTCAGGGCAGCCGCTTCCCCACCC...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR GCA 90 bp ACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCTGCTCTAGGGCCCCTCTaGTGCTGTGCTGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TPAVASLGPARGSAAAGPALGPL*CCAGWG
Trigger: TCCCCACCCAGCACAGCAGCAGAGGGGCCCTAGAGC...AGGTCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCAGACGCCCGCCTTCACTaGGCGGCACAGGAAGGTCGG +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPDARLH*AAQEGR
Trigger: CCGACCTTCCTGTGCCGCCCAGTGAAGGCGGGCGTC...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR CCA 90 bp CGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGACCCCCATCCTTTCCTaGGTGGGTCAGGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: RPPQQSRASALPEEALPPTPILS*VGQGQG
Trigger: ACCCTGTCCCTGACCCACCCAGGAAAGGATGGGGGT...CGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGTCTGGGCAGGTGGGGTaGACCTGGGGCTTATCCACC +
Preference number: 4 (lower is better)
Translates to: ASCGQTRETRWRVCRCRRSGQVG*TWGLST
Trigger: GGTGGATAAGCCCCAGGTCCACCCCACCTGCCCAGA...CCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp TGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGCAGGGCGGAGTTGGATaGGGCCCGTCCGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: CAGQSEASFCSSLHSAHRQGGVG*GPSGGS
Trigger: GCTCCCTCCGGACGGGCCTCATCCAACTCCGCCCTG...CCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp ACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCTCGGCGAGTCCTTCTGTaGCTGTGCTGGGCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: TPAVASLGPARGSAAAGPRRVLL*LCWAER
Trigger: TCGCTCTGCCCAGCACAGTCACAGAAGGACTCGCCG...AGGTCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp ACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCAGGGAGGTGACAGCTaGAACCTGCACCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TSAHPSSREPRPCQRKRCQGGDS*NLHQEG
Trigger: CCCCTCCTGGTGCAGGTTTCAGCTGTCACCTCCCTG...GCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp AGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGATGCAGGTCACATGCCTaGGCCTCACAGGCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: RQRPPPTPAVASLGPARGCRSHA*ASQARG
Trigger: GCCACGAGCCTGTGAGGCTCAGGCATGTGACCTGCA...TCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCGCTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCACCCAGCGCCCTGCTGTaGAGAAGGAGAAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PEAFWSPGWAPVRPLQSPPSALL*RRRRPG
Trigger: CCCAGGCCTTCTCCTTCTGCACAGCAGGGCGCTGGG...TGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACTGACCCGACTGAACTaGCTGATCTGCCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: PTPAVASLGPARGSAAAGLTRLN*LICLRQ
Trigger: CTGGCGGAGGCAGATCAGGCAGTTCAGTCGGGTCAG...TCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCGCCCCTCTGCTGCTGTaGTGGGTGGGGAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLAPLLL*WVGKRL
Trigger: CAGCCGCTTCCCCACCCAGCACAGCAGCAGAGGGGC...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCAGCTCTAGGGCCCCTCTaGTGCTGTGCTGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPALGPL*CCAGWG
Trigger: TCCCCACCCAGCACAGCAGCAGAGGGGCCCTAGAGC...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR GCA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCGCCATCCATCCCCAGTaGGGTGCCCGTGACCGGCGA +
Preference number: 4 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLAIHPQ*GARDRR
Trigger: TCGCCGGTCACGGGCACCGCACTGGGGATGGATGGC...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GCTCCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCTCTCCTGGAGCTCCCTaGTCCAGCCAGGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: APEAFWSPGWAPVRPLQSSPGAP*SSQGEA
Trigger: GGCCTCTCCCTGGCTGGAGCAGGGAGCTCCAGGAGA...GGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTCTGTCACAGCTCCCCTaGGCTGCTGTTCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RPPPTPAVASLGPARGSALSQLP*AAVPAQ
Trigger: CTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAG...AGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAACAAGCTGGGCTGGGTCCTGCCGGGTGGCTGCAGCTaGGCCTGGTGTGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PLPPGLKQVLHNKLGWVLPGGCS*AWCGGG
Trigger: ACCACCCCCACACCAGGCCCAGCTGCAGCCACCCGG...CAGGACCCAGCCCAGCTTGTTGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGAGGTCCACGTTCACCTaGAAGCTGGTGGCGCCCATG +
Preference number: 4 (lower is better)
Translates to: ASCGQTRETRWRVCRCRRRSTFT*KLVAPM
Trigger: CATGGGCGCCACCAGCTTCCAGGTGAACGTGGACCT...CCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGCAGGCTCCACTAACTaGGGCTACGACTCTGATGGG +
Preference number: 4 (lower is better)
Translates to: RPPQQSRASALPEEALPPAGSTN*GYDSDG
Trigger: CCCATCAGAGTCGTAGCCCCAGTTAGTGGAGCCTGC...CGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp CCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGAGAAGCCTCAGGGAGGTaGCAGCTGAAACCTGCACCA +
Preference number: 4 (lower is better)
Translates to: PTPAVASLGPARGSAAAGEASGR*QLKPAP
Trigger: TGGTGCAGGTTTCAGCTGTCACCTCCCTGAGGCTTC...TCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp GCCACCGCCTGCGCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCGGCTGCAGTGAGCCGTaGTCACACCAGTGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: ATACASCGQTRETRWRVCGCSEP*SHQCVP
Trigger: TGGAACGCACTGGTGTGATCACGGCTCACTGCAGCC...GCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGCGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp GAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACACCTGGCACTTCGTCCTaGGTGCAGCCCGCCGAGACG +
Preference number: 4 (lower is better)
Translates to: ETRWRVCRCRRASSRCYTPGTSS*VQPAET
Trigger: CGTCTCGGCGGGCTGCACTCAGGACGAAGTGCCAGG...TGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTGGCCGCCTGCAGCCCTaGGCCGTCTCTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGGRLQP*AVSCHW
Trigger: CCAGTGGCAAGAGACGGCGCAGGGCTGCAGGCGGCC...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTGCTCCCGCTCCGTGCTaGAGGCCTCCAGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGAPAPC*RPPAPA
Trigger: AGCAGGCGCTGGAGGCCTGCAGCACGGAGCGGGAGC...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp TGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGGGTGGGGAAGCGGCTaGCCTGAGCCCCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: CAGQSEASFCSSLHSAHRGWGSG*PEPQVL
Trigger: CAAGACCTGGGGCTCAGGGCAGCCGCTTCCCCACCC...CCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GTAGCAGCCTGCACTCGGCCCACCGGGGCAGGGACTGCCGCCGATGGTGTGCTCCCGAGTACTCCACGCTaGCGCCATCCATCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: VAACTRPTGAGTAADGVLPSTPR*RHPSPV
Trigger: CACTGGGGATGGATGGCGGCAGCGTGGAGTACTCGG...GAGCACACCATCGGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GCCTCCAGGGCCCTCCTGGTCATGCAGAATGGGGCAGAGCCGGAGCCCGTTGGGGGATGCAGGCGTGCCTaGGGGCTCGGCAGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: ASRALLVMQNGAEPEPVGGCRRA*GLGSVR
Trigger: TCGAACACTGCCGAGCCCGCAGGCACGCCTGCATCC...CCCAACGGGCTCCGGCTCTGCCCCATTCTGCATGACCAGGAGGGCCCTGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGGCAGGTCCTTCCGGGGCGGCTaGTTGTGTGACCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GQSEASFCSSLHSAHRGRSFRGG*LCDLVL
Trigger: CAGCACCAGGTCACACAAGCAGCCGCCCCGGAAGGA...CCTGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp ACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTGCTGTTCCGGCTCAGCTGGCTGGGCACCGGTaGGGCCCCTGCAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: TWCCSLLSQLPCAAVPAQLAGHR*GPCSPH
Trigger: GTGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAG...CTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCAACCGCCCAGGGTGTCTaGTCTGTCCCCAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPTAQGV*SVPKAA
Trigger: TGCAGCCTTGGGGACAGACCAGACACCCTGGGCGGT...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR CCA 90 bp AGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAAGTCCCTGGAGGCCTaGACCCCCATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RQRPPPTPAVASLGPARGKSLEA*TPILSW
Trigger: CCAGGAAAGGATGGGGGTCCAGGCCTCCAGGGACTT...TCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCGCTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp TGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGCGTTGGGAGGGAGCCTaGGCTGTGCGCTCGGGGTAC +
Preference number: 4 (lower is better)
Translates to: CAGQSEASFCSSLHSAHRRWEGA*AVRSGY
Trigger: GTACCCCGAGCGCACAGCCCAGGCTCCCTCCCAACG...CCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCTCCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCTGGTCATGCAGAATaGGGCAGAGCCGGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: APEAFWSPGWAPVRPLQSPGHAE*GRAGAR
Trigger: ACGGGCTCCGGCTCTGCCCCATTCTGCATGACCAGG...GGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp AGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAGTGGCGCCCATGTCATaGTCCCCTGTGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RQRPPPTPAVASLGPARGVAPMS*SPVASP
Trigger: AGGAGAAGCCACAGGGGACCATGACATGGGCGCCAC...TCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCGCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCCTCCAGGGCCCTCCTGGTCATGCAGAATGGGGCAGAGCCGGAGCCCGTTGGGGCAGGGTCATGGCTGTaGGACGCGGGCGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: ASRALLVMQNGAEPEPVGAGSWL*DAGVST
Trigger: TGTGGACACGCCCGCGTCCCACAGCCATGACCCTGC...CCCAACGGGCTCCGGCTCTGCCCCATTCTGCATGACCAGGAGGGCCCTGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp TGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGCCGCCGGACCTGACTaGCTTCCCAGTGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: CAGQSEASFCSSLHSAHRAAGPD*LPSGTA
Trigger: GGCAGTTCCACTGGGAAGTCAGTCAGGTCCGGCGGC...CCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp GTAGCAGCCTGCACTCGGCCCACCGGGGCAGGGACTGCCGCCGATGGTGTGCTCGGCCAGGCCAGTGTCTaGCACACGCATGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VAACTRPTGAGTAADGVLGQASV*HTHAAC
Trigger: ACAAGCAGCATGCGTGTGTCAGACACTGGCCTGGCC...GAGCACACCATCGGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp CCAGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGTTGAGCCCAGGAGTTTaGGACCTGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: PGSDLRPPQQSRASALPELSPGV*DLPGQH
Trigger: ATGTTGCCCAGGCAGGTCTCAAACTCCTGGGCTCAA...CTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCGCTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCTTCGGGCTCTCTGGCTaGTGTGTCCCCCGGGAAACG +
Preference number: 4 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLFGLSG*CVPRET
Trigger: CGTTTCCCGGGGGACACAGCAGCCAGAGAGCCCGAA...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAGGCTGCCCAGCGCCCTaGTGTGCAGAAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: ETRWRVCRCRRASSRCYTGCPAP*CAEGEG
Trigger: GCCTTCTCCTTCTGCACAGCAGGGCGCTGGGCAGCC...TGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTACTCCGCCAGGCCGCCTaGAGCCCTGCGCCGTCTCTT +
Preference number: 4 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLLRQAA*SPAPSL
Trigger: AAGAGACGGCGCAGGGCTGCAGGCGGCCTGGCGGAG...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACACTGAACTGCCTGATCTaGCTCCGCCAGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: ETRWRVCRCRRASSRCYTLNCLI*LRQAAC
Trigger: GCAGGCGGCCTGGCGGAGGCAGATCAGGCAGTTCAG...TGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCACTGACCCGACTGAACTaGCTGATCTGCCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPLTRLN*LICLRQ
Trigger: CTGGCGGAGGCAGATCAGGCAGTTCAGTCGGGTCAG...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR GCA 90 bp GCCACCGCCTGCGCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCGAAGGCTGTGACAACTaGATCAGCCACGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ATACASCGQTRETRWRVCEGCDN*ISHGWA
Trigger: AGCCCAGCCGTGGCTGATGCAGTTGTCACAGCCTTC...GCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGCGGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGCGGCCAGGAGGCCCATaGGCTCCCGCTCCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVRPGGP*APAPCC
Trigger: GCAGCACGGAGCGGGAGCGCATGGGCCTCCTGGCCG...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000564182.1
CDS-3UTR GCA 90 bp GAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACATCCCTCCAGTACCTGTaGTGCCACCGCCTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: ETRWRVCRCRRASSRCYTSLQYL*CHRLRQ
Trigger: CTGGCGCAGGCGGTGGCAGCACAGGTACTGGAGGGA...TGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCCTCGTGGCTGTGGGATaGAGGCGTGCCTGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPLVAVG*RRACGL
Trigger: GAGCCCGCAGGCACGCCTGCATCCCACAGCCACGAG...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCATGCATCAGCCACGGCTaGGCTGACCCGACTGAACTG +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPCISHG*ADPTEL
Trigger: CAGTTCAGTCGGGTCAGCCCAGCCGTGGCTGATGCA...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR CCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCAGGCTGCATGCTGTCCTaGTGGTCCCACGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPGCMLS*WSHVWS
Trigger: TGACCACACGTGGGACCACCAGGACAGCATGCAGCC...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR CCA 90 bp CGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTACTGCCTTCTTGGGCTaGGACAGCCCCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RPPPTPAVASLGPARGSATAFLG*DSPFPL
Trigger: CAGAGGAAAGGGGCTGTCCCAGCCCAAGAAGGCAGT...AGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCACTCGGGAGACACGCTaGAGGGTCTGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPTRETR*RVCRCR
Trigger: GCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGT...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGCTGGCCTAAGGTGTaGAGATGCCCTAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ARLGRHAGGSAAAAGPQAGWPKV*RCPRQA
Trigger: TGCCTGCCTAGGGCATCTCCACACCTTAGGCCAGCC...TGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GTAGCAGCCTGCACTCGGCCCACCGGGGCAGGGACTGCCGCCGATGGTGTGCTCCGGAACAGCAGGGCCTaGCACTTCGTCCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: VAACTRPTGAGTAADGVLRNSRA*HFVLSA
Trigger: TGCACTCAGGACGAAGTGCCAGGCCCTGCTGTTCCG...GAGCACACCATCGGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGGCAGGAGGTTTGCCCAGAGCTaGAGGAGTACCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GQSEASFCSSLHSAHRGRRFAQS*RSTRAS
Trigger: AGAGGCCCTGGTACTCCTGCAGCTCTGGGCAAACCT...CCTGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCGTAACGGCGCACACGTaGCGACTCAGCTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLVTAHT*RLSSCQ
Trigger: TTGGCAGGAGCTGAGTCGGCACGTGTGCGCCGTTAC...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGCCCTGCGCCGTCTCTTaGCACTGGCTCGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVPCAVS*HWLAGC
Trigger: GCAGCCGGCGAGCCAGTGGCAAGAGACGGCGCAGGG...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000564182.1
CDS-3UTR GCA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGGCTCCCGCTCCGTGCTaGAGGCCTCCAGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVAPAPC*RPPAPA
Trigger: AGCAGGCGCTGGAGGCCTGCAGCACGGAGCGGGAGC...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000564182.1
CDS-3UTR GCA 90 bp GGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGGCAGGCATGCTGTCAGCGGCTaGCCCGCCGTCATAGACTTA +
Preference number: 4 (lower is better)
Translates to: GQSEASFCSSLHSAHRGRHAVSG*PAVIDL
Trigger: TAAGTCTATGACGGCGGGGCAGCCGCTGACAGCATG...CCTGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GTGAGCCAGGTCTGCTCAGGTAACAGGAAGGTCGTTGGGCCACAGTGTGGTGGGCTGCCGCCGATGGTGTaGTCCACGGCGGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VSQVCSGNRKVVGPQCGGLPPMV*STAARS
Trigger: GCTCCGGGCCGCCGTGGAGCACACCATCGGCGGCAG...CCCACCACACTGTGGCCCAACGACCTTCCTGTTACCTGAGCAGACCTGGCTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCTGTGGGATGCAGGCGTaGCTGCGGGCTCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPCGMQA*LRARQC
Trigger: ACACTGCCGAGCCCGCAGGCACGCCTGCATCCCACA...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAACAAGCTGGGCTGGGTCCTGCCTGGTGCTGCTCTCTaGTGTCACAGCTCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: PLPPGLKQVLHNKLGWVLPGAAL*CHSSPA
Trigger: CGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGG...CAGGACCCAGCCCAGCTTGTTGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGGCCTGTCTCCTGGATaGACCGCATTCAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: ASCGQTRETRWRVCRCRRGLSPG*TAFSKT
Trigger: AGTCTTACTGAATGCGGTGCATCCAGGAGACAGGCC...CCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp AGGTCACCCGCTCCTGTGCCAGCGCCACTTCCCTCCAGTACCTGTGCTGCCACCCACCTTCGGGCTCTCTaGCTGCTGTGTCCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: RSPAPVPAPLPSSTCAATHLRAL*LLCPPG
Trigger: TCCCGGGGGACACAGCAGCCAGAGAGCCCGAAGGTG...GGTGGCAGCACAGGTACTGGAGGGAAGTGGCGCTGGCACAGGAGCGGGTGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp AGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGACAGAAGGAGAAGGCCTaGGATTCCCGGTACTGCTTG +
Preference number: 4 (lower is better)
Translates to: RQRPPPTPAVASLGPARGQKEKA*DSRYCL
Trigger: CAAGCAGTACCGGGAATCCCAGGCCTTCTCCTTCTG...TCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCGCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTTGTCCTGTGTGCCGTCTCTTGCCACTaGCTCGCCGGCTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: QACLRARQCSTHVLLVLCAVSCH*LAGCPA
Trigger: CGCTGGGCAGCCGGCGAGCCAGTGGCAAGAGACGGC...ACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAACAAGCTGGGCTGGGTCCTGCCTCCAGGGCCCTCCTaGTCATGCAGAATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLPPGLKQVLHNKLGWVLPPGPS*SCRMGQ
Trigger: CTGCCCCATTCTGCATGACCAGGAGGGCCCTGGAGG...CAGGACCCAGCCCAGCTTGTTGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCACGCACTTCTAGGCAGTaGGGTAGAGTTGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ARLGRHAGGSAAAAGPQARTSRQ*GRVVWA
Trigger: GGCCCAGACAACTCTACCCCACTGCCTAGAAGTGCG...TGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp AGGTCACCCGCTCCTGTGCCAGCGCCACTTCCCTCCAGTACCTGTGCTGCCACCACAGGCTCGTGGCTGTaGGATGCAGGCGTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RSPAPVPAPLPSSTCAATTGSWL*DAGVPA
Trigger: CGCAGGCACGCCTGCATCCCACAGCCACGAGCCTGT...GGTGGCAGCACAGGTACTGGAGGGAAGTGGCGCTGGCACAGGAGCGGGTGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CCTGCGCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCTTGGGGGCAAATTaGGAAACAGGGTCCTTACCC +
Preference number: 4 (lower is better)
Translates to: PAPAAARLGRHAGGSAAAALGAN*ETGSLP
Trigger: GGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGC...GGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCAGAGCTGCTCAGATCCTaGAGTGAGGTACGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PEAFWSPGWAPVRPLQSPELLRS*SEVRAP
Trigger: AGGAGCCCGTACCTCACTCCAGGATCTGAGCAGCTC...TGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp CCAGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGCCCATTTCTGGAGGTaGCCATTGTTAACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGSDLRPPQQSRASALPEAHFWR*PLLTCW
Trigger: CCAGCAAGTTAACAATGGTCACCTCCAGAAATGGGC...CTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCGCTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTCACTGGCTCGCCGGCTaGCCAGCGCCCTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPHWLAG*PAPCCA
Trigger: TGCACAGCAGGGCGCTGGGCAGCCGGCGAGCCAGTG...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp ACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTCCCTGCGCCGTCTCTTaGCACTGGCTCGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: TFTWKLVAPMSWSPVASPPCAVS*HWLAGC
Trigger: GCAGCCGGCGAGCCAGTGGCAAGAGACGGCGCAGGG...AGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGGGTCAGGCCCCACCCTaGGGGGACGCCCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPGQAPP*GDARLH
Trigger: GTGAAGGCGGGCGTCCCCGCAGGGTGGGGCCTGACC...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGGCCCCTCTGCTGCTGTaGTGGGTGGGGAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVAPLLL*WVGKRL
Trigger: CAGCCGCTTCCCCACCCAGCACAGCAGCAGAGGGGC...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000564182.1
CDS-3UTR GCA 90 bp TGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGAGAGTTGTCTGGGCCTaGCTTGTCTGTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CAGQSEASFCSSLHSAHRRVVWA*LVCGVG
Trigger: CCCCACCCCACAGACAAGGCAGGCCCAGACAACTCT...CCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CCTGCGCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCCTGACACACGCATGCTaGTTGTCCTCTGTCACCATG +
Preference number: 4 (lower is better)
Translates to: PAPAAARLGRHAGGSAAALTHAC*LSSVTM
Trigger: CATGGTGACAGAGGACAAGCAGCATGCGTGTGTCAG...GGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp TGGGAGGCCAGGCTGAGGGTCCACATGTGGCTGGGGGTCCTCCCCCACCGCCCAGATCAGGGTTGGCTGTaGTCAGGAAGAGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: WEARLRVHMWLGVLPHRPDQGWL*SGRGRC
Trigger: GCATCTGCCTCTTCCTGACCACAGCCAACCCTGATC...TGGGCGGTGGGGGAGGACCCCCAGCCACATGTGGACCCTCAGCCTGGCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR CCA 90 bp TGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGGCTGCATGCTGTCCTaGTGGTCCCACGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: CAGQSEASFCSSLHSAHRGCMLS*WSHVWS
Trigger: TGACCACACGTGGGACCACCAGGACAGCATGCAGCC...CCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTAACTCCAGGGCGGAGTTaGATGAGGCCCGTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLTPGRS*MRPVRR
Trigger: CCTCCGGACGGGCCTCATCCAACTCCGCCCTGGAGT...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GAGAGCGGGCAACAGGTAGTAACAGCCGGCCCTTCTCTCCCAGCACAGCGACTCCAGCTGGGCCTGGTGTaGGGGTGGTGGCCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ESGQQVVTAGPSLPAQRLQLGLV*GWWPCL
Trigger: CAGGCAAGGCCACCACCCCCACACCAGGCCCAGCTG...GAGTCGCTGTGCTGGGAGAGAAGGGCCGGCTGTTACTACCTGTTGCCCGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp TCTAGATTCTTTCCACCATGGCCAGACGCCCCCGGAACAGCAGGGCCTGGCACTAGCGTTCTGGAGCCCTaGCTGGGCACCGGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: SRFFPPWPDAPGTAGPGTSVLEP*LGTGAA
Trigger: GGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCT...AGTGCCAGGCCCTGCTGTTCCGGGGGCGTCTGGCCATGGTGGAAAGAATCTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCGGGAGGCCAGGAACCTaGAGGTATTCAGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLGRPGT*RYSEQL
Trigger: GAGCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCC...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp GTAGCAGCCTGCACTCGGCCCACCGGGGCAGGGACTGCCGCCGATGGTGTGCTCCAGGCAGACATTACCTaGACACGGAATCAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: VAACTRPTGAGTAADGVLQADIT*TRNQSE
Trigger: CTCCGACTGATTCCGTGTTCAGGTAATGTCTGCCTG...GAGCACACCATCGGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp ACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCTACCTGGGTTTTATTaGGCTGCTCAGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TSAHPSSREPRPCQRKRCLPGFY*AAQILE
Trigger: CTCCAGGATCTGAGCAGCTCAATAAAACCCAGGTAG...GCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGTGTGGGAGGCCAGGCTaGGGGTCCACATGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVCGRPG*GSTCGW
Trigger: CCAGCCACATGTGGACCCTCAGCCTGGCCTCCCACA...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564182.1
CDS-3UTR GCA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGGGCTGCCCAGCGCCCTaGTGTGCAGAAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVGCPAP*CAEGEG
Trigger: GCCTTCTCCTTCTGCACAGCAGGGCGCTGGGCAGCC...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000564182.1
CDS-3UTR GCA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGCTGAACTGCCTGATCTaGCTCCGCCAGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVLNCLI*LRQAAC
Trigger: GCAGGCGGCCTGGCGGAGGCAGATCAGGCAGTTCAG...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000564182.1
CDS-3UTR GCA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACCGGCCAGGAGGCCCATaGGCTCCCGCTCCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHRPGGP*APAPCC
Trigger: GCAGCACGGAGCGGGAGCGCATGGGCCTCCTGGCCG...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTCTAACTTGCTCTGCATaGTGTCAGCGGCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGLTCSA*CQRLPR
Trigger: GCGGGGCAGCCGCTGACAGCATGCAGAGCAAGTTAG...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp TGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGCGGGCCTCAAGCAGGTaGTACACAACAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CAGQSEASFCSSLHSAHRRASSR*YTTSWA
Trigger: AGCCCAGCTTGTTGTGTAGCACCTGCTTGAGGCCCG...CCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTTGTCCTGTGTGTGACAGCTGAAACCTaGACCAGGAGGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: QACLRARQCSTHVLLVLCVTAET*TRRGGA
Trigger: GGCCCCGCCCCTCCTGGTGCAGGTTTCAGCTGTCAC...ACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GAGAGCGGGCAACAGGTAGTAACAGCCGGCCCTTCTCTCCCAGCACAGCGACTCGTGGCTGCGCCTCCCTaGCCCACTTCCAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: ESGQQVVTAGPSLPAQRLVAAPP*PTSSYH
Trigger: GTGGTAGCTGGAAGTGGGGCAGGGAGGCGCAGCCAC...GAGTCGCTGTGCTGGGAGAGAAGGGCCGGCTGTTACTACCTGTTGCCCGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTAGGTGTTTGTCTGTCTaGAGCCCAGGTGATCTGACA +
Preference number: 4 (lower is better)
Translates to: RPPPTPAVASLGPARGSARCLSV*SPGDLT
Trigger: TGTCAGATCACCTGGGCTGCAGACAGACAAACACCT...AGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCCTCCAGGGCCCTCCTGGTCATGCAGAATGGGGCAGAGCCGGAGCCCGTTGGGGAGCTCACGTTCTGGTaGGAGGAGGCCAAGAATCAG +
Preference number: 4 (lower is better)
Translates to: ASRALLVMQNGAEPEPVGELTFW*EEAKNQ
Trigger: CTGATTCTTGGCCTCCTCCCACCAGAACGTGAGCTC...CCCAACGGGCTCCGGCTCTGCCCCATTCTGCATGACCAGGAGGGCCCTGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGGCAGGCCCTGTGGCTTCTCCTaGGGATCACATCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: GQSEASFCSSLHSAHRGRPCGFS*GSHHLS
Trigger: AGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGG...CCTGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTTCACCTGGAAGCTGGTaGCGCCCATGTCATGGTCCC +
Preference number: 4 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGSPGSW*RPCHGP
Trigger: GGGACCATGACATGGGCGCCACCAGCTTCCAGGTGA...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTGGCCTGCCTTGTCTGTaGGGTGGGGCCATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: TFTWKLVAPMSWSPVASPGLPCL*GGAIPS
Trigger: GGAGGGGATGGCCCCACCCCACAGACAAGGCAGGCC...AGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTATCAGGGGGTCTACCCTaGCTCTGGGGACCCGCACTT +
Preference number: 4 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLSGGLP*LWGPAL
Trigger: AAGTGCGGGTCCCCAGAGCCAGGGTAGACCCCCTGA...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTAAGCCTCACAGGCTCGTaGCTGTGGGATGCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLSLTGS*LWDAGV
Trigger: CACGCCTGCATCCCACAGCCACGAGCCTGTGAGGCT...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTGCTGTTCCGGCTCAGCGAGGCGGACGTGGCTaGCCTAAGGTGTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: TWCCSLLSQLPCAAVPAQRGGRG*PKVWRC
Trigger: GCATCTCCACACCTTAGGCCAGCCACGTCCGCCTCG...CTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCAGATTCTTTCCACCATaGCCAGACGCCCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLRFFPP*PDAPGT
Trigger: TGTTCCGGGGGCGTCTGGCCATGGTGGAAAGAATCT...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTGCTGTTCCGGCTCAGAGTCCCCACTTTGAGTaGGTCCGTGGCCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TWCCSLLSQLPCAAVPAQSPHFE*VRGPAW
Trigger: CCAGGCTGGGCCACGGACCCACTCAAAGTGGGGACT...CTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGGAGCCCCAGGTCTTGTaGGAGGCCAGGCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVEPQVL*EARLRV
Trigger: GACCCTCAGCCTGGCCTCCCACAAGACCTGGGGCTC...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564182.1
3UTR CAA 72 bp CTAAGCCCGGTGGGTCCATTAGGCCTTGGGGGCAAATaGGGAAACAGGGTCCTTACCCACCGGGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LSPVGPLGLGGK*GNRVLTHRVGA
Trigger: GGCCCCCACCCGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACCGGGCTTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CAA 72 bp CACAGGCCAGGCCAGTGTCTGACACACGCATGCTGCTaGTCCTCTGTCACCATGGGCCGTGTCCTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: HRPGQCLTHACC*SSVTMGRVLPG
Trigger: CCCCGGAAGGACACGGCCCATGGTGACAGAGGACAAGCAGCATGCGTGTGTCAGACACTGGCCTGGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CAA 72 bp CCAGCTTCTCATCGCGGTTCGGCCAGGGCTCCATCATaGGCGTGCACCTGGACACCTGGCACGGCACACTCA +
Preference number: 4 (lower is better)
Translates to: PASHRGSARAPS*ACTWTPGTAHS
Trigger: TGAGTGTGCCGTGCCAGGTGTCCAGGTGCACGCCAATGATGGAGCCCTGGCCGAACCGCGATGAGAAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.6
CDS-3UTR TCA 90 bp ACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTCGCTGCCGCCGGACCTaGCTGACTTCCCAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: TFTWKLVAPMSWSPVASPRCRRT*LTSQWN
Trigger: GTTCCACTGGGAAGTCAGTCAGGTCCGGCGGCAGCG...AGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp CCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAACAAGCTGGGCTGGGTCCTGGACAGTGTCCTGCCCTaGAGCTGGCTTTCGATAGGT +
Preference number: 4 (lower is better)
Translates to: PLPPGLKQVLHNKLGWVLDSVLP*SWLSIG
Trigger: ACCTATCGAAAGCCAGCTTCAGGGCAGGACACTGTC...CAGGACCCAGCCCAGCTTGTTGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAACTTCCCAGTGGAACTaGCTTCTTGGGCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: ETRWRVCRCRRASSRCYTTSQWN*LLGLGQ
Trigger: CTGTCCCAGCCCAAGAAGGCAGTTCCACTGGGAAGT...TGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp ACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTCTCCAGTACCTGTGCTaGCACCGCCTGCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TFTWKLVAPMSWSPVASPLQYLC*HRLRQL
Trigger: CAGCTGGCGCAGGCGGTGGCAGCACAGGTACTGGAG...AGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp ACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTCCTTCTGTAGCAGCCTaGACTCGGCCCACCGGGGCA +
Preference number: 4 (lower is better)
Translates to: TFTWKLVAPMSWSPVASPPSVAA*TRPTGA
Trigger: TGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGG...AGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp ACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCGTTCGACACATGTGCTaGTTGTCCTGTGTCACCAAA +
Preference number: 4 (lower is better)
Translates to: TSAHPSSREPRPCQRKRCVRHMC*LSCVTK
Trigger: TTTGGTGACACAGGACAAGCAGCACATGTGTCGAAC...GCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTACAGCTCCCCTGCGCTaGTGTTCCGGCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPTAPLR*CSGSAR
Trigger: CCTGGCTGAGCCGGAACAGCAGCGCAGGGGAGCTGT...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGAGGAGAGGTTGGCAGTTaGTTTTGGTTCATTCAACAG +
Preference number: 4 (lower is better)
Translates to: PTPAVASLGPARGSAAAGGEVGS*FWFIQQ
Trigger: CTGTTGAATGAACCAAAAGCAACTGCCAACCTCTCC...TCCGGCGGCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GAGAGCGGGCAACAGGTAGTAACAGCCGGCCCTTCTCTCCCAGCACAGCGACTCGCACTTCGTCCTGAGTaGAGCCCGCCGAGACGCAGA +
Preference number: 4 (lower is better)
Translates to: ESGQQVVTAGPSLPAQRLALRPE*SPPRRR
Trigger: TCTGCGTCTCGGCGGGCTGCACTCAGGACGAAGTGC...GAGTCGCTGTGCTGGGAGAGAAGGGCCGGCTGTTACTACCTGTTGCCCGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTATGCATCAGCCACGGCTaGGCTGACCCGACTGAACTG +
Preference number: 4 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLCISHG*ADPTEL
Trigger: CAGTTCAGTCGGGTCAGCCCAGCCGTGGCTGATGCA...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCCTGTAGTGGGCACTGGGCAGTAGGACCCTGTGGTGAGCCAGGTCTGCTCAGGTCTCCACTACGGGGCTaGGCACTGTGGCTCACACCT +
Preference number: 4 (lower is better)
Translates to: ACSGHWAVGPCGEPGLLRSPLRG*ALWLTP
Trigger: AGGTGTGAGCCACAGTGCCCAGCCCCGTAGTGGAGA...CCTGAGCAGACCTGGCTCACCACAGGGTCCTACTGCCCAGTGCCCACTACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp CATGGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTGGACCAGCCCTGGGCGGCTGCTTGTGTaGCCTGGTGCTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: HGPLWLLLGITSSLWTSPGRLLV*PGAALC
Trigger: GCAGAGAGCAGCACCAGGTCACACAAGCAGCCGCCC...AGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCCTGTGCTTTCTCCTCTaGAACACATGGTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLLCFLL*NTWCME
Trigger: CTCCATGCACCATGTGTTTCAGAGGAGAAAGCACAG...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGGTCTGTCCCCAAGGCTaGATGCTGTCCTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVVCPQG*MLSWWS
Trigger: GGACCACCAGGACAGCATGCAGCCTTGGGGACAGAC...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000564182.1
CDS-3UTR GCA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACACCGCCTGCGCCAGCTaGGGCCAGACTCGGGAGACA +
Preference number: 4 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHTACAS*GQTRET
Trigger: TGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGCGGT...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTGTCACCAAATGGGCCTaGAGTCTGTTGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGVTKWA*SLLWAG
Trigger: TCCTGCCCACAACAGACTGCAGGCCCATTTGGTGAC...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GTAGCAGCCTGCACTCGGCCCACCGGGGCAGGGACTGCCGCCGATGGTGTGCTCACCAGACGCTTCTTCTaGCAGTACAAACGCATACTC +
Preference number: 4 (lower is better)
Translates to: VAACTRPTGAGTAADGVLTRRFF*QYKRIL
Trigger: GAGTATGCGTTTGTACTGGCAGAAGAAGCGTCTGGT...GAGCACACCATCGGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTTGTCCTGTGTGCCTTGTCTGTGGGGTaGGGCCATCCCCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: QACLRARQCSTHVLLVLCALSVG*GHPLQK
Trigger: TTTCTGGAGGGGATGGCCCCACCCCACAGACAAGGC...ACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTGCTGTTCCGGCTCAGTGGGGTAGAGTTGTCTaGGCCTGCCTTGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TWCCSLLSQLPCAAVPAQWGRVV*ACLVCG
Trigger: CCCACAGACAAGGCAGGCCCAGACAACTCTACCCCA...CTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAGCAGGAGGTAGGCAGTaGCTTCAGTCTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ETRWRVCRCRRASSRCYTAGGRQ*LQSFSF
Trigger: GAAGGAGAAAGACTGAAGCCACTGCCTACCTCCTGC...TGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACATCCTGTGTCACCAAATaGGCCTGCAGTCTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: ETRWRVCRCRRASSRCYTSCVTK*ACSLLW
Trigger: CCACAACAGACTGCAGGCCCATTTGGTGACACAGGA...TGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GTGAGCCAGGTCTGCTCAGGTAACAGGAAGGTCGTTGGGCCACAGTGTGGTGGGTGTCCTCTGTCACCATaGGCCGTGTCCTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: VSQVCSGNRKVVGPQCGGCPLSP*AVSFRG
Trigger: GCCCCGGAAGGACACGGCCCATGGTGACAGAGGACA...CCCACCACACTGTGGCCCAACGACCTTCCTGTTACCTGAGCAGACCTGGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GCCTCCAGGGCCCTCCTGGTCATGCAGAATGGGGCAGAGCCGGAGCCCGTTGGGGATCTGACATGCTTGTaGGCTTTGCAGGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: ASRALLVMQNGAEPEPVGDLTCL*ALQAEL
Trigger: TAGCTCTGCCTGCAAAGCCCACAAGCATGTCAGATC...CCCAACGGGCTCCGGCTCTGCCCCATTCTGCATGACCAGGAGGGCCCTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CAA 72 bp GCTACACAACAAGCTGGGCTGGGTCCTGAGCATGAGTaGCAGCCGCCGCAAGGCTCCAGTGTCCGATCCCCA +
Preference number: 4 (lower is better)
Translates to: ATQQAGLGPEHE*QPPQGSSVRSP
Trigger: TGGGGATCGGACACTGGAGCCTTGCGGCGGCTGCAACTCATGCTCAGGACCCAGCCCAGCTTGTTGTGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
3UTR CAA 72 bp GTCTGCAGCCCAGGTGATCTGACATGCTTGTGGGCTTaGCAGGCAGAGCTACCTGCCCCCATGGCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: VCSPGDLTCLWA*QAELPAPMAPD
Trigger: GTCAGGGGCCATGGGGGCAGGTAGCTCTGCCTGCAAAGCCCACAAGCATGTCAGATCACCTGGGCTGCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
CDS-3UTR GCA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGGAAGGCTGTGACAACTaGATCAGCCACGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVEGCDN*ISHGWA
Trigger: AGCCCAGCCGTGGCTGATGCAGTTGTCACAGCCTTC...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000564182.1
CDS-3UTR GCA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTGTCTGTCCCCAAGGCTaGATGCTGTCCTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPVCPQG*MLSWWS
Trigger: GGACCACCAGGACAGCATGCAGCCTTGGGGACAGAC...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGGGTCTTGTGGGAGGCTaGGAGGACGAGAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPGLVGG*EDESLA
Trigger: AGCCAGGCTCTCGTCCTCGCAGCCTCCCACAAGACC...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GTGAGCCAGGTCTGCTCAGGTAACAGGAAGGTCGTTGGGCCACAGTGTGGTGGGCTCCTGCAGGTCACATaGCTGAGCCTCACAGGCTCG +
Preference number: 4 (lower is better)
Translates to: VSQVCSGNRKVVGPQCGGLLQVT*LSLTGS
Trigger: CGAGCCTGTGAGGCTCAGGCATGTGACCTGCAGGAG...CCCACCACACTGTGGCCCAACGACCTTCCTGTTACCTGAGCAGACCTGGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGGCAGGAGATCAGGGTTaGCTGTGGTCAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVAGDQG*LWSGRG
Trigger: GCCTCTTCCTGACCACAGCCAACCCTGATCTCCTGC...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000564182.1
CDS-3UTR CCA 90 bp ACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTGCCTGTAGTGGGCACTaGGCAGTAGGACCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: TFTWKLVAPMSWSPVASPACSGH*AVGPCG
Trigger: ACCACAGGGTCCTACTGCCCAGTGCCCACTACAGGC...AGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CAA 72 bp GATGACCTCTCCCGTCTACGGCACCGACATGGTAAGTaGCTTCGGCCCAGGGTGCTTCTGGGGAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: DDLSRLRHRHGK*LRPRVLLGNLA
Trigger: AGCCAGGTTCCCCAGAAGCACCCTGGGCCGAAGCAACTTACCATGTCGGTGCCGTAGACGGGAGAGGTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.6
CDS-3UTR GCA 90 bp CAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTTGTCCTGTGTGTGGTGAGCCAGGTCTaGTCAGGTAACAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: QACLRARQCSTHVLLVLCVVSQV*SGNRKV
Trigger: GACCTTCCTGTTACCTGAGCAGACCTGGCTCACCAC...ACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCAGTGTTCGACACATGTaGTGCTTGTCCTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPSVRHM*CLSCVT
Trigger: GGTGACACAGGACAAGCAGCACATGTGTCGAACACT...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGTGGACCTGGGGCTTATCCACCGTCTAGAAACCACTTGGAGGCCAGGCAGCCTCCTAAGGTGTGGAGATaGCCTAGGCAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGPGAYPPSRNHLEARQPPKVWR*PRQAGR
Trigger: TCTGCCTGCCTGCCTAGGGCATCTCCACACCTTAGG...AGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGGTGGATAAGCCCCAGGTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CAGGCGTGCCTGCGGGCTCGGCAGTGTTCGACACATGTGCTGCTTGTCCTGTGTTGTCATGGTCCCCTGTaGCTTCTCCTGGGGATCACA +
Preference number: 4 (lower is better)
Translates to: QACLRARQCSTHVLLVLCCHGPL*LLLGIT
Trigger: TGTGATCCCCAGGAGAAGCCACAGGGGACCATGACA...ACACAGGACAAGCAGCACATGTGTCGAACACTGCCGAGCCCGCAGGCACGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGTGGAGCAGTCTCTCCTaGCCTCGCAGGGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPWSSLS*PRRVMA
Trigger: AGCCATGACCCTGCGAGGCCAGGAGAGACTGCTCCA...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GTGAGCCAGGTCTGCTCAGGTAACAGGAAGGTCGTTGGGCCACAGTGTGGTGGGACAGGTCATGTGCCCTaGAGCAGTCTCTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VSQVCSGNRKVVGPQCGGTGHVP*SSLSWP
Trigger: AGGCCAGGAGAGACTGCTCCAGGGCACATGACCTGT...CCCACCACACTGTGGCCCAACGACCTTCCTGTTACCTGAGCAGACCTGGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GAGAGCGGGCAACAGGTAGTAACAGCCGGCCCTTCTCTCCCAGCACAGCGACTCTTTCCTAACTTGCTCTaGATGCTGTCAGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ESGQQVVTAGPSLPAQRLFPNLL*MLSAAA
Trigger: GGCAGCCGCTGACAGCATGCAGAGCAAGTTAGGAAA...GAGTCGCTGTGCTGGGAGAGAAGGGCCGGCTGTTACTACCTGTTGCCCGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGGAAAGGACAGTGTCCTaGCCTGAAGCTGGCTTTCGA +
Preference number: 4 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVERTVS*PEAGFR
Trigger: TCGAAAGCCAGCTTCAGGGCAGGACACTGTCCTTTC...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GAGAGCGGGCAACAGGTAGTAACAGCCGGCCCTTCTCTCCCAGCACAGCGACTCCCAGGTGATCTGACATaGTTGTGGGCTTTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ESGQQVVTAGPSLPAQRLPGDLT*LWALQA
Trigger: TGCCTGCAAAGCCCACAAGCATGTCAGATCACCTGG...GAGTCGCTGTGCTGGGAGAGAAGGGCCGGCTGTTACTACCTGTTGCCCGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ACCTGGTGCTGCTCTCTGCTGTCACAGCTCCCCTGCGCTGCTGTTCCGGCTCAGATCACATCATCTCTCTaGACCAGCCCTCAACCCTCA +
Preference number: 4 (lower is better)
Translates to: TWCCSLLSQLPCAAVPAQITSSL*TSPQPS
Trigger: TGAGGGTTGAGGGCTGGTCCAGAGAGATGATGTGAT...CTGAGCCGGAACAGCAGCGCAGGGGAGCTGTGACAGCAGAGAGCAGCACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGCGTTCACCTGGAAGCTaGTGGCGCCCATGTCATGGT +
Preference number: 4 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPRSPGS*WRPCHG
Trigger: ACCATGACATGGGCGCCACCAGCTTCCAGGTGAACG...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTGCTGCTTGTGTGACCTaGTGCTGCTCTCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TFTWKLVAPMSWSPVASPAACVT*CCSLLS
Trigger: TGACAGCAGAGAGCAGCACCAGGTCACACAAGCAGC...AGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp AGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAGTTGGCAGTTGCTTTTaGTTCATTCAACAGAAATTC +
Preference number: 4 (lower is better)
Translates to: RQRPPPTPAVASLGPARGVGSCF*FIQQKF
Trigger: GAATTTCTGTTGAATGAACCAAAAGCAACTGCCAAC...TCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CACTTAGCACTCTCCCTGCTGACCCCCTGGTCCATTCAGCCCCTGGGTGGCCCCGAAACACATGGTGCATaGAGAGGTTGGCAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: HLALSLLTPWSIQPLGGPETHGA*RGWQLL
Trigger: AAGCAACTGCCAACCTCTCCATGCACCATGTGTTTC...GGGGCCACCCAGGGGCTGAATGGACCAGGGGGTCAGCAGGGAGAGTGCTAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GGTGGGAGGAGGCCAAGAATCAGGACCAAGGAGAACTTCAGTGAAGCAAAAGAATTCTGGAGCCCTGGCTaGGCACCGGTGCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GGRRPRIRTKENFSEAKEFWSPG*APVRPL
Trigger: CAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAA...TTCTTTTGCTTCACTGAAGTTCTCCTTGGTCCTGATTCTTGGCCTCCTCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACGCAGCCCAGGTGATCTaGCATGCTTGTGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHAAQVI*HACGLC
Trigger: GCAAAGCCCACAAGCATGTCAGATCACCTGGGCTGC...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACTGTCTGCAGCCCAGGTaGTCTGACATGCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHCLQPR*SDMLVG
Trigger: GCCCACAAGCATGTCAGATCACCTGGGCTGCAGACA...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CACACAGCCTCAGGGGTGACAGGACCTCAGAACACACTGCATTCTTCACTGTGCTGCCGACTCAGCTCCTaGCAAGAGGCCACCAGTAGC +
Preference number: 4 (lower is better)
Translates to: HTASGVTGPQNTLHSSLCCRLSS*QEATSS
Trigger: GCTACTGGTGGCCTCTTGGCAGGAGCTGAGTCGGCA...GCACAGTGAAGAATGCAGTGTGTTCTGAGGTCCTGTCACCCCTGAGGCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACTGGGATTCCCGGTACTaGTTGAGGGGATACTGGGCG +
Preference number: 4 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHWDSRY*LRGYWA
Trigger: CGCCCAGTATCCCCTCAAGCAGTACCGGGAATCCCA...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CACACAGCCTCAGGGGTGACAGGACCTCAGAACACACTGCATTCTTCACTGTGCGAGGGAGCCATCTCTTaGTCCCGAGGCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: HTASGVTGPQNTLHSSLCEGAIS*SRGWDS
Trigger: ACTGTCCCAGCCTCGGGAGCAAGAGATGGCTCCCTC...GCACAGTGAAGAATGCAGTGTGTTCTGAGGTCCTGTCACCCCTGAGGCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp TCTAGATTCTTTCCACCATGGCCAGACGCCCCCGGAACAGCAGGGCCTGGCACTTGTCTGACACACGCATaGTGCTTGTCCTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: SRFFPPWPDAPGTAGPGTCLTHA*CLSSVT
Trigger: GGTGACAGAGGACAAGCAGCATGCGTGTGTCAGACA...AGTGCCAGGCCCTGCTGTTCCGGGGGCGTCTGGCCATGGTGGAAAGAATCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GGTGGGTCCATTAGGCCTTGGGGGCAAATTGGGAAACAGGGTCCTTACCCACCGGATCAGGGTTGGCTGTaGTCAGGAAGAGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GGSIRPWGQIGKQGPYPPDQGWL*SGRGRC
Trigger: GCATCTGCCTCTTCCTGACCACAGCCAACCCTGATC...CGGTGGGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp TCTAGATTCTTTCCACCATGGCCAGACGCCCCCGGAACAGCAGGGCCTGGCACTGGGTCCATTAGGCCTTaGGGGCAAATTGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: SRFFPPWPDAPGTAGPGTGSIRP*GQIGKQ
Trigger: CTGTTTCCCAATTTGCCCCCAAGGCCTAATGGACCC...AGTGCCAGGCCCTGCTGTTCCGGGGGCGTCTGGCCATGGTGGAAAGAATCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACGGACCAGTCCAAACCTaGGCCTGTCTCCTGGATGCA +
Preference number: 4 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHGPVQT*ACLLDA
Trigger: TGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCC...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp AGGCAGGCAGGCAGACATTACCTGAACACGGAATCAGTCGGAGAAAAAGATGCTGCGCTCGGGGTACTGTaGAGTCCCTGGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RQAGRHYLNTESVGEKDAALGVL*SPWRPG
Trigger: TCCAGGCCTCCAGGGACTTCACAGTACCCCGAGCGC...AGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCCTGCCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp CACACAGCCTCAGGGGTGACAGGACCTCAGAACACACTGCATTCTTCACTGTGCTCCCAGTCGGTTTCCTaGGATCTCCCTCGGACCAGA +
Preference number: 4 (lower is better)
Translates to: HTASGVTGPQNTLHSSLCSQSVS*DLPRTR
Trigger: TCTGGTCCGAGGGAGATCTCAGGAAACCGACTGGGA...GCACAGTGAAGAATGCAGTGTGTTCTGAGGTCCTGTCACCCCTGAGGCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp AGGCAGGCAGGCAGACATTACCTGAACACGGAATCAGTCGGAGAAAAAGATGCTCACCGGTGCGGCCCCTaGAGTCCCCACTTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: RQAGRHYLNTESVGEKDAHRCGP*SPHFEW
Trigger: CCACTCAAAGTGGGGACTGCAGGGGCCGCACCGGTG...AGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCCTGCCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACCACAACAAGCTGGGCTaGGTCCTGAGCATGAGTTGC +
Preference number: 4 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHHNKLG*VLSMSC
Trigger: GCAACTCATGCTCAGGACCCAGCCCAGCTTGTTGTG...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp CACACAGCCTCAGGGGTGACAGGACCTCAGAACACACTGCATTCTTCACTGTGCCTGGAAGCTCAGGGCTaGGAGTGCTGTGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HTASGVTGPQNTLHSSLCLEAQG*ECCESS
Trigger: GGAAGACTCACAGCACTCCCAGCCCTGAGCTTCCAG...GCACAGTGAAGAATGCAGTGTGTTCTGAGGTCCTGTCACCCCTGAGGCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp AAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTGAAGGTATTCAGAACAGCGGCCTGCAGTGCAGGTaGTCAGTTCTGTGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: KISALAQGGQEPEGIQNSGLQCR*SVLCPG
Trigger: GCCCGGGCACAGAACTGAGCACCTGCACTGCAGGCC...GCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ATTGTTAACTTGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGTACAAACGCAAGGGACTGCCGCCGATaGTGTGCTCCACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: IVNLLVVLPDASSASTNARDCRR*CAPRRP
Trigger: GGGCCGCCGTGGAGCACACCATCGGCGGCAGTCCCT...TGCGTTTGTACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GGCAGACATTACCTGAACACGGAATCAGTCGGAGAAAAAGATGCTTCTGAGGCTGGGTGGGGGTCCCTGTaGGGGGTGATTTCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: GRHYLNTESVGEKDASEAGWGSL*GVISQS
Trigger: CGACTGGGAAATCACCCCCCACAGGGACCCCCACCC...AGCCTCAGAAGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CAA 72 bp TGCTTGTCCTGTGTCACCAAATGGGCCTGCAGTCTGTaGTGGGCAGGAGGTAGGCAGTGGCTTCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: CLSCVTKWACSL*WAGGRQWLQSF
Trigger: GAAAGACTGAAGCCACTGCCTACCTCCTGCCCACAACAGACTGCAGGCCCATTTGGTGACACAGGACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000568449.6
CDS-3UTR TCA 90 bp AAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTGAAGGTATTCAGAACAGCGACAGAGGGCAAGGGTaGGAGGGTAGAGAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: KISALAQGGQEPEGIQNSDRGQG*EGRERA
Trigger: TGCCCGCTCTCTACCCTCTCACCCTTGCCCTCTGTC...GCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp CATGGTCCCCTGTGGCTTCTCCTGGGGATCACATCATCTCTCTGGACCAGCCCTAAAAATTTCTGCACTTaGTCAGGGAGGCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: HGPLWLLLGITSSLWTSPKNFCT*SGRPGT
Trigger: GGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTTT...AGGGCTGGTCCAGAGAGATGATGTGATCCCCAGGAGAAGCCACAGGGGACCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GGCAGACATTACCTGAACACGGAATCAGTCGGAGAAAAAGATGCTTCTGAGGCTGGTCTACCCTGGCTCTaGGGACCCGCACTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: GRHYLNTESVGEKDASEAGLPWL*GPALLG
Trigger: GCCTAGAAGTGCGGGTCCCCAGAGCCAGGGTAGACC...AGCCTCAGAAGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp ATTGTTAACTTGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGTACAAACGCACTGCAGTCCCCACTTTaGGTGGGTCCGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IVNLLVVLPDASSASTNALQSPL*VGPWPS
Trigger: GCTGGGCCACGGACCCACTCAAAGTGGGGACTGCAG...TGCGTTTGTACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GGTGGGAGGAGGCCAAGAATCAGGACCAAGGAGAACTTCAGTGAAGCAAAAGAACGTCTAGAAACCACTTaGAGGCCAGGCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GGRRPRIRTKENFSEAKERLETT*RPGSLG
Trigger: GCCAAGGCTGCCTGGCCTCCAAGTGGTTTCTAGACG...TTCTTTTGCTTCACTGAAGTTCTCCTTGGTCCTGATTCTTGGCCTCCTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GTGAGCCAGGTCTGCTCAGGTAACAGGAAGGTCGTTGGGCCACAGTGTGGTGGGCCATTGTTAACTTGCTaGTTGTCTTACCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: VSQVCSGNRKVVGPQCGGPLLTC*LSYQTL
Trigger: AAGCGTCTGGTAAGACAACCAGCAAGTTAACAATGG...CCCACCACACTGTGGCCCAACGACCTTCCTGTTACCTGAGCAGACCTGGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGTGGGAGGAGGCCAAGAATCAGGACCAAGGAGAACTTCAGTGAAGCAAAAGAACTACCACAGGTCATGTaGCCTGGAGCAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GGRRPRIRTKENFSEAKELPQVM*PGAVSP
Trigger: AGGAGAGACTGCTCCAGGGCACATGACCTGTGGTAG...TTCTTTTGCTTCACTGAAGTTCTCCTTGGTCCTGATTCTTGGCCTCCTCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp AAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTGAAGGTATTCAGAACAGCGCAGGAGATCAGGGTTaGCTGTGGTCAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: KISALAQGGQEPEGIQNSAGDQG*LWSGRG
Trigger: GCCTCTTCCTGACCACAGCCAACCCTGATCTCCTGC...GCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ATTGTTAACTTGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGTACAAACGCAACCGCCCAGGGTGTCTaGTCTGTCCCCAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: IVNLLVVLPDASSASTNATAQGV*SVPKAA
Trigger: TGCAGCCTTGGGGACAGACCAGACACCCTGGGCGGT...TGCGTTTGTACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp AAAATTTCTGCACTTGCTCAGGGAGGCCAGGAACCTGAAGGTATTCAGAACAGCGTGGAACTGCCTTCTTaGGCTGGGACAGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: KISALAQGGQEPEGIQNSVELPS*AGTAPF
Trigger: GAAAGGGGCTGTCCCAGCCCAAGAAGGCAGTTCCAC...GCTGTTCTGAATACCTTCAGGTTCCTGGCCTCCCTGAGCAAGTGCAGAAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp ATTGTTAACTTGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGTACAAACGCAGAGGCCAGGCAGCCTTaGCTACTGCTCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IVNLLVVLPDASSASTNAEARQP*LLLCGW
Trigger: CCAGCCACAGAGCAGTAGCCAAGGCTGCCTGGCCTC...TGCGTTTGTACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp AGACGCTTCTTCTGCCAGTACAAACGCATACTCTTTGTTCACATATATGTGTGTGGGCCCCTGCAGGGCTaGCCTAGCAGGGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: RRFFCQYKRILFVHIYVCGPLQG*PSREGV
Trigger: GACACCTTCCCTGCTAGGCCAGCCCTGCAGGGGCCC...ACACACATATATGTGAACAAAGAGTATGCGTTTGTACTGGCAGAAGAAGCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp GGCAGACATTACCTGAACACGGAATCAGTCGGAGAAAAAGATGCTTCTGAGGCTCAGTGCGTTCCAGCCTaGGTGACAGAGCTAGACCCT +
Preference number: 4 (lower is better)
Translates to: GRHYLNTESVGEKDASEAQCVPA*VTELDP
Trigger: AGGGTCTAGCTCTGTCACCCAGGCTGGAACGCACTG...AGCCTCAGAAGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp ATTGTTAACTTGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGTACAAACGCACTTAAAGGACCAGGCTaGGGGTCCACATGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IVNLLVVLPDASSASTNALKGPG*GSTCGW
Trigger: CCAGCCACATGTGGACCCTCAGCCTGGTCCTTTAAG...TGCGTTTGTACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR TCA 90 bp AGACGCTTCTTCTGCCAGTACAAACGCATACTCTTTGTTCACATATATGTGTGTCTGGGGCTACGACTCTaGTGGGCAGGTAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RRFFCQYKRILFVHIYVCLGLRL*WAGRFQ
Trigger: CTGGAACCTACCTGCCCATCAGAGTCGTAGCCCCAG...ACACACATATATGTGAACAAAGAGTATGCGTTTGTACTGGCAGAAGAAGCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
3UTR CAA 72 bp TTACCCAGCCCATTTCTGGAGGTGACCATTGTTAACTaGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LPSPFLEVTIVN*LVVLPDASSAS
Trigger: ACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAATGGTCACCTCCAGAAATGGGCTGGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp AGACGCTTCTTCTGCCAGTACAAACGCATACTCTTTGTTCACATATATGTGTGTCATGCTTGTGGGCTTTaGAGGCAGAGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: RRFFCQYKRILFVHIYVCHACGL*RQSYLP
Trigger: GGGCAGGTAGCTCTGCCTGCAAAGCCCACAAGCATG...ACACACATATATGTGAACAAAGAGTATGCGTTTGTACTGGCAGAAGAAGCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp GGCAGACATTACCTGAACACGGAATCAGTCGGAGAAAAAGATGCTTCTGAGGCTTGGGTTTTATTGAGCTaGTCAGATCCTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GRHYLNTESVGEKDASEAWVLLS*SDPGVR
Trigger: CCTCACTCCAGGATCTGAGCAGCTCAATAAAACCCA...AGCCTCAGAAGCATCTTTTTCTCCGACTGATTCCGTGTTCAGGTAATGTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR GCA 90 bp ATTGTTAACTTGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGTACAAACGCACGGTTTTTCCTAACTTaGTCTGCATGCTGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: IVNLLVVLPDASSASTNARFFLT*SACCQR
Trigger: CCGCTGACAGCATGCAGAGCAAGTTAGGAAAAACCG...TGCGTTTGTACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CCA 90 bp AGACGCTTCTTCTGCCAGTACAAACGCATACTCTTTGTTCACATATATGTGTGTTGCTTGAGGGGATACTaGGCGAGAGCCTTGGTAACG +
Preference number: 4 (lower is better)
Translates to: RRFFCQYKRILFVHIYVCCLRGY*ARALVT
Trigger: CGTTACCAAGGCTCTCGCCCAGTATCCCCTCAAGCA...ACACACATATATGTGAACAAAGAGTATGCGTTTGTACTGGCAGAAGAAGCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS GCA 90 bp GGCCGTTCTCTGGACGCCGGCTGCCGGTCCGGGCCTGGGCCGACGTaGGCCGCGAGAGCCGCCTCTTGCAGCTGCTCGGCCGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: GRSLDAGCRSGPGPT*AARAASCSCSAASR
Trigger: GCGGGAGGCGGCCGAGCAGCTGCAAGAGGCGGCTCTCGCGGCGCACGTCGGCCCAGGCCCGGACCGGCAGCCGGCGTCCAGAGAACGGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS CCA 90 bp GGGTCGGGACTCGCTCGGGTCCACCGCAGGCTGCGGGCCGGGCGCTaGGGCTCGATGCGGCACTCGCAGCCCAGGGCCTCCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GSGLARVHRRLRAGR*GSMRHSQPRASRAS
Trigger: GGAGGCCCTGGAGGCCCTGGGCTGCGAGTGCCGCATCGAGCCCCAGCGCCCGGCCCGCAGCCTGCGGTGGACCCGAGCGAGTCCCGACCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568449.7
ENST00000570069.5
CDS GCA 90 bp TCCGGGCCTGGGCCGACGTGCGCCGCGAGAGCCGCCTCTTGCAGCTaGTCGGCCGCCTCCCGCTCTTCGGCCTGGGCCGCCTGGTCACGC +
Preference number: 5 (lower is better)
Translates to: SGPGPTCAARAASCS*SAASRSSAWAAWSR
Trigger: GCGTGACCAGGCGGCCCAGGCCGAAGAGCGGGAGGCGGCCGAGCAGCTGCAAGAGGCGGCTCTCGCGGCGCACGTCGGCCCAGGCCCGGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS CCA 90 bp ACCTTGACGCGGCCGTTCTCTGGACGCCGGCTGCCGGTCCGGGCCTaGGCCGACGTGCGCCGCGAGAGCCGCCTCTTGCAGCTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: TLTRPFSGRRLPVRA*ADVRRESRLLQLLG
Trigger: GCCGAGCAGCTGCAAGAGGCGGCTCTCGCGGCGCACGTCGGCCCAGGCCCGGACCGGCAGCCGGCGTCCAGAGAACGGCCGCGTCAAGGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS TCA 90 bp TCTCGCGGCGGCCTCCGAGCCGGCGGAGTCCTCAGCGTCGGAGTCTaGGATCTCCCAGGTTGGAGGTCGCCGCTGACCGCTCCCGCCCCG +
Preference number: 5 (lower is better)
Translates to: SRGGLRAGGVLSVGV*DLPGWRSPLTAPAP
Trigger: CGGGGCGGGAGCGGTCAGCGGCGACCTCCAACCTGGGAGATCTCAGACTCCGACGCTGAGGACTCCGCCGGCTCGGAGGCCGCCGCGAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS GCA 90 bp CCGACTGAACTGCCTGATCTGCCTCCGCCAGGCCGCCTGCAGCCCTaGGCCGTCTCTTGCCACTGGCTCGCCGGCTGCCCAGCGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PTELPDLPPPGRLQP*AVSCHWLAGCPAPC
Trigger: GCAGGGCGCTGGGCAGCCGGCGAGCCAGTGGCAAGAGACGGCGCAGGGCTGCAGGCGGCCTGGCGGAGGCAGATCAGGCAGTTCAGTCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS GCA 90 bp TCCAGGATGGCTGTGTCCACGCACACCGCGAGGCGCTTCAGGACCTaGTCCGGCCGCAGCAGCCGCAACGCCTCGGCAGCCGCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: SRMAVSTHTARRFRT*SGRSSRNASAAALR
Trigger: GCGCAGGGCGGCTGCCGAGGCGTTGCGGCTGCTGCGGCCGGAGCAGGTCCTGAAGCGCCTCGCGGTGTGCGTGGACACAGCCATCCTGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568449.7
ENST00000570069.5
CDS CCA 90 bp CCGCTCTTCGGCCTGGGCCGCCTGGTCACGCGCAAGTCCTGGCTGTaGCAGCACGACGAGCCGTGCTACTGGCGCCTCACGCGGGTGCGG +
Preference number: 5 (lower is better)
Translates to: PLFGLGRLVTRKSWL*QHDEPCYWRLTRVR
Trigger: CCGCACCCGCGTGAGGCGCCAGTAGCACGGCTCGTCGTGCTGCCACAGCCAGGACTTGCGCGTGACCAGGCGGCCCAGGCCGAAGAGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS CCA 90 bp CGCCTCCCGCTCTTCGGCCTGGGCCGCCTGGTCACGCGCAAGTCCTaGCTGTGGCAGCACGACGAGCCGTGCTACTGGCGCCTCACGCGG +
Preference number: 5 (lower is better)
Translates to: RLPLFGLGRLVTRKS*LWQHDEPCYWRLTR
Trigger: CCGCGTGAGGCGCCAGTAGCACGGCTCGTCGTGCTGCCACAGCCAGGACTTGCGCGTGACCAGGCGGCCCAGGCCGAAGAGCGGGAGGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS CCA 90 bp CCAGCTCTACGCGGTGGACTACGAGACCTTGACGCGGCCGTTCTCTaGACGCCGGCTGCCGGTCCGGGCCTGGGCCGACGTGCGCCGCGA +
Preference number: 5 (lower is better)
Translates to: PALRGGLRDLDAAVL*TPAAGPGLGRRAPR
Trigger: TCGCGGCGCACGTCGGCCCAGGCCCGGACCGGCAGCCGGCGTCCAGAGAACGGCCGCGTCAAGGTCTCGTAGTCCACCGCGTAGAGCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS-3UTR CAA 90 bp CGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTCAGAGCCGGAGCCCGTaGGGAGGGAGCCTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: RPPPTPAVASLGPARGSAQSRSP*GGSLGC
Trigger: ACAGCCCAGGCTCCCTCCCAACGGGCTCCGGCTCTG...AGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS TCA 90 bp ACAGGCCGCGCGACTCCCAGCTCTACGCGGTGGACTACGAGACCTTaGCGCGGCCGTTCTCTGGACGCCGGCTGCCGGTCCGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: TGRATPSSTRWTTRP*RGRSLDAGCRSGPG
Trigger: CCCAGGCCCGGACCGGCAGCCGGCGTCCAGAGAACGGCCGCGTCAAGGTCTCGTAGTCCACCGCGTAGAGCTGGGAGTCGCGCGGCCTGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS TCA 90 bp CGGCCGCGACCGAACACTTTAGCCTGGGACACCGGCCTCTTCCGGTaGCTTCCGGCCGGACCGCTGAGGACGCGGACCCGCCATGGCGCG +
Preference number: 5 (lower is better)
Translates to: RPRPNTLAWDTGLFR*LPAGPLRTRTRHGA
Trigger: CGCGCCATGGCGGGTCCGCGTCCTCAGCGGTCCGGCCGGAAGTCACCGGAAGAGGCCGGTGTCCCAGGCTAAAGTGTTCGGTCGCGGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS GCA 90 bp CCTGATCTGCCTCCGCCAGGCCGCCTGCAGCCCTGCGCCGTCTCTTaGCACTGGCTCGCCGGCTGCCCAGCGCCCTGCTGTGCAGAAGGA +
Preference number: 5 (lower is better)
Translates to: PDLPPPGRLQPCAVS*HWLAGCPAPCCAEG
Trigger: TCCTTCTGCACAGCAGGGCGCTGGGCAGCCGGCGAGCCAGTGGCAAGAGACGGCGCAGGGCTGCAGGCGGCCTGGCGGAGGCAGATCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000565326.1
ENST00000568449.7
ENST00000570069.5
CDS GCA 90 bp GGGCTGACCCGACTGAACTGCCTGATCTGCCTCCGCCAGGCCGCCTaGAGCCCTGCGCCGTCTCTTGCCACTGGCTCGCCGGCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GLTRLNCLICLRQAA*SPAPSLATGSPAAQ
Trigger: CTGGGCAGCCGGCGAGCCAGTGGCAAGAGACGGCGCAGGGCTGCAGGCGGCCTGGCGGAGGCAGATCAGGCAGTTCAGTCGGGTCAGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS GCA 90 bp GCCCGCCTTCACTGGGCGGCACAGGAAGGTCGGCCAGGAGGCCCATaGGCTCCCGCTCCGTGCTGCAGGCCTCCAGCGCCTGCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: ARLHWAAQEGRPGGP*APAPCCRPPAPAAE
Trigger: TTCTGCAGCAGGCGCTGGAGGCCTGCAGCACGGAGCGGGAGCGCATGGGCCTCCTGGCCGACCTTCCTGTGCCGCCCAGTGAAGGCGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS CCA 90 bp AGAGCCGCCTCTTGCAGCTGCTCGGCCGCCTCCCGCTCTTCGGCCTaGGCCGCCTGGTCACGCGCAAGTCCTGGCTGTGGCAGCACGACG +
Preference number: 5 (lower is better)
Translates to: RAASCSCSAASRSSA*AAWSRASPGCGSTT
Trigger: CGTCGTGCTGCCACAGCCAGGACTTGCGCGTGACCAGGCGGCCCAGGCCGAAGAGCGGGAGGCGGCCGAGCAGCTGCAAGAGGCGGCTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS GCA 90 bp TGGTCAGGAAGAGGCAGATGCGGCGGGAGAGGTCAGGCCCCACCCTaGGGGGACGCCCGCCTTCACTGGGCGGCACAGGAAGGTCGGCCA +
Preference number: 5 (lower is better)
Translates to: WSGRGRCGGRGQAPP*GDARLHWAAQEGRP
Trigger: TGGCCGACCTTCCTGTGCCGCCCAGTGAAGGCGGGCGTCCCCGCAGGGTGGGGCCTGACCTCTCCCGCCGCATCTGCCTCTTCCTGACCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS CCA 90 bp CGGCCAGCTGACGGCCACCTCGGCACCGGCCACCTTCGGGCTCTCTaGCTGCTGTGTCCCCCGGGAAACGTGCTGGCGAGACCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: RPADGHLGTGHLRAL*LLCPPGNVLARPEQ
Trigger: CTGCTCAGGTCTCGCCAGCACGTTTCCCGGGGGACACAGCAGCCAGAGAGCCCGAAGGTGGCCGGTGCCGAGGTGGCCGTCAGCTGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565326.1
ENST00000570069.5
CDS CCA 90 bp TCTTGCAGCTGCTCGGCCGCCTCCCGCTCTTCGGCCTGGGCCGCCTaGTCACGCGCAAGTCCTGGCTGTGGCAGCACGACGAGCCGTGCT +
Preference number: 5 (lower is better)
Translates to: SCSCSAASRSSAWAA*SRASPGCGSTTSRA
Trigger: AGCACGGCTCGTCGTGCTGCCACAGCCAGGACTTGCGCGTGACCAGGCGGCCCAGGCCGAAGAGCGGGAGGCGGCCGAGCAGCTGCAAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS TCA 90 bp CCCGGGAAACGTGCTGGCGAGACCACAGGTAGGCATCCAGCCCGATaGCAGCCAGGTGGGGCCGGGCGGTGGTCTCGGGGGAGATCCAGG +
Preference number: 5 (lower is better)
Translates to: PGKRAGETTGRHPAR*QPGGAGRWSRGRSR
Trigger: CCTGGATCTCCCCCGAGACCACCGCCCGGCCCCACCTGGCTGTCATCGGGCTGGATGCCTACCTGTGGTCTCGCCAGCACGTTTCCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561564.5
ENST00000568449.7
CDS CCA 90 bp CGGCCAGCTGACGGCCACCTCGGCACCGGCCACCTTCGGGCTCTCTaGCTGCTGTGTCCCCCGGGAAACGTGCTGGCGAGACCACAGGTA +
Preference number: 5 (lower is better)
Translates to: RPADGHLGTGHLRAL*LLCPPGNVLARPQV
Trigger: TACCTGTGGTCTCGCCAGCACGTTTCCCGGGGGACACAGCAGCCAGAGAGCCCGAAGGTGGCCGGTGCCGAGGTGGCCGTCAGCTGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561564.5
ENST00000568449.7
CDS-3UTR CAA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTGCCCTGCGCCGTCTCTaGCCACTGGCTCGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGALRRL*PLARRL
Trigger: CAGCCGGCGAGCCAGTGGCAAGAGACGGCGCAGGGC...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp ACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCTTGTCTGGGCCTGCCTaGTCTGTGGGGTGGGGCCAT +
Preference number: 5 (lower is better)
Translates to: TSAHPSSREPRPCQRKRCLSGPA*SVGWGH
Trigger: ATGGCCCCACCCCACAGACAAGGCAGGCCCAGACAA...GCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS GCA 90 bp CAGCTGACGGCCACCTCGGCACCGGCCACCTTCGGGCTCTCTGGCTaGTGTGTCCCCCGGGAAACGTGCTGGCGAGACCTGAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: QLTATSAPATFGLSG*CVPRETCWRDLSRG
Trigger: ACCTCTGCTCAGGTCTCGCCAGCACGTTTCCCGGGGGACACAGCAGCCAGAGAGCCCGAAGGTGGCCGGTGCCGAGGTGGCCGTCAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565326.1
ENST00000570069.5
CDS TCA 90 bp GTGGGCATGAGAGTGAGCGGTACCACAGGTAGGCATCCAGCCCGATaGCAGCCAGGTGGGGCCGGGCGGTGGTCTCGGGGGAGATCCAGG +
Preference number: 5 (lower is better)
Translates to: VGMRVSGTTGRHPAR*QPGGAGRWSRGRSR
Trigger: CCTGGATCTCCCCCGAGACCACCGCCCGGCCCCACCTGGCTGTCATCGGGCTGGATGCCTACCTGTGGTACCGCTCACTCTCATGCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570069.5
CDS GCA 90 bp CCCTGCGCCGTCTCTTGCCACTGGCTCGCCGGCTGCCCAGCGCCCTaGTGTGCAGAAGGAGAAGGCCTGGGATTCCCGGTACTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: PCAVSCHWLAGCPAP*CAEGEGLGFPVLLE
Trigger: CTCAAGCAGTACCGGGAATCCCAGGCCTTCTCCTTCTGCACAGCAGGGCGCTGGGCAGCCGGCGAGCCAGTGGCAAGAGACGGCGCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000565326.1
ENST00000568449.7
ENST00000570069.5
CDS GCA 90 bp GCTGTGACAACTGCATCAGCCACGGCTGGGCTGACCCGACTGAACTaGCTGATCTGCCTCCGCCAGGCCGCCTGCAGCCCTGCGCCGTCT +
Preference number: 5 (lower is better)
Translates to: AVTTASATAGLTRLN*LICLRQAACSPAPS
Trigger: AGACGGCGCAGGGCTGCAGGCGGCCTGGCGGAGGCAGATCAGGCAGTTCAGTCGGGTCAGCCCAGCCGTGGCTGATGCAGTTGTCACAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS-3UTR CAA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGGCCCTGCGCCGTCTCTaGCCACTGGCTCGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVALRRL*PLARRL
Trigger: CAGCCGGCGAGCCAGTGGCAAGAGACGGCGCAGGGC...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000564182.1
CDS-3UTR CAA 90 bp GCCACCGCCTGCGCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCAGCAGGAGATCAGGGTaGGCTGTGGTCAGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: ATACASCGQTRETRWRVCSRRSG*AVVRKR
Trigger: CCTCTTCCTGACCACAGCCAACCCTGATCTCCTGCT...GCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGCGCAGGCGGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp GTAGCAGCCTGCACTCGGCCCACCGGGGCAGGGACTGCCGCCGATGGTGTGCTCGTAACAGGAAGGTCGTaGGGCCACAGTGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: VAACTRPTGAGTAADGVLVTGRS*GHSVVG
Trigger: CCCCACCACACTGTGGCCCAACGACCTTCCTGTTAC...GAGCACACCATCGGCGGCAGTCCCTGCCCCGGTGGGCCGAGTGCAGGCTGCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS CCA 90 bp CTGCCCTGCCCGAGCTTGGCCTCTGCCAGAGCCCACCTGGAGAAGTaGGATCAGCTGTGCCACAGCAACCCCAGAAGTGTGCCCACCTCC +
Preference number: 5 (lower is better)
Translates to: LPCPSLASARAHLEK*DQLCHSNPRSVPTS
Trigger: GGAGGTGGGCACACTTCTGGGGTTGCTGTGGCACAGCTGATCCCACTTCTCCAGGTGGGCTCTGGCAGAGGCCAAGCTCGGGCAGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570069.5
CDS CCA 90 bp CATGGGGCCTGCCCTGCCCGAGCTTGGCCTCTGCCAGAGCCCACCTaGAGAAGTGGGATCAGCTGTGCCACAGCAACCCCAGAAGTGTGC +
Preference number: 5 (lower is better)
Translates to: HGACPARAWPLPEPT*RSGISCATATPEVC
Trigger: GCACACTTCTGGGGTTGCTGTGGCACAGCTGATCCCACTTCTCCAGGTGGGCTCTGGCAGAGGCCAAGCTCGGGCAGGGCAGGCCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570069.5
CDS-3UTR CAA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTTACTGGGCGAGAGCCTaGGTAACGGCGCACACGTGC +
Preference number: 5 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGYWARA*VTAHTC
Trigger: GCACGTGTGCGCCGTTACCAAGGCTCTCGCCCAGTA...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp GAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACACCGTCTAGAAACCACTaGGAGGCCAGGCAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: ETRWRVCRCRRASSRCYTPSRNH*EARQPW
Trigger: CCAAGGCTGCCTGGCCTCCAAGTGGTTTCTAGACGG...TGTGTAGCACCTGCTTGAGGCCCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp GGTCCTTACCCACCGGGTGGGGGCCGTCCTGAGGTCTCCTGGAGCTCCCTGCTCGGCCTTGGGGGCAAATaGGGAAACAGGGTCCTTACC +
Preference number: 5 (lower is better)
Translates to: GPYPPGGGRPEVSWSSLLGLGGK*GNRVLT
Trigger: GGTAAGGACCCTGTTTCCCAATTTGCCCCCAAGGCC...GAGCAGGGAGCTCCAGGAGACCTCAGGACGGCCCCCACCCGGTGGGTAAGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp GCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGTGGTGCATGGAGAGGTaGGCAGTTGCTTTTGGTTCA +
Preference number: 5 (lower is better)
Translates to: ASCGQTRETRWRVCRCRRWCMER*AVAFGS
Trigger: TGAACCAAAAGCAACTGCCAACCTCTCCATGCACCA...CCGGCGGCAGCGGCAGACCCTCCAGCGTGTCTCCCGAGTCTGGCCGCAGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS GCA 90 bp TGGGCGAGAGCCTTGGTAACGGCGCACACGTGCCGACTCAGCTCCTaGCAAGAGGCCACCAGTAGCACGTCCAGGTTTGCCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: WARALVTAHTCRLSS*QEATSSTSRFAQSC
Trigger: GCAGCTCTGGGCAAACCTGGACGTGCTACTGGTGGCCTCTTGGCAGGAGCTGAGTCGGCACGTGTGCGCCGTTACCAAGGCTCTCGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561564.5
ENST00000561903.6
ENST00000565326.1
ENST00000568449.7
ENST00000570069.5
CDS-3UTR CAA 90 bp TGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGCTTGAGCCCAGGAGTTaGAGACCTGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: CAGQSEASFCSSLHSAHRLEPRS*RPAWAT
Trigger: TGTTGCCCAGGCAGGTCTCAAACTCCTGGGCTCAAG...CCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCCAGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS GCA 90 bp TGCTTGAGGGGATACTGGGCGAGAGCCTTGGTAACGGCGCACACGTaGCGACTCAGCTCCTGCCAAGAGGCCACCAGTAGCACGTCCAGG +
Preference number: 5 (lower is better)
Translates to: CLRGYWARALVTAHT*RLSSCQEATSSTSR
Trigger: CCTGGACGTGCTACTGGTGGCCTCTTGGCAGGAGCTGAGTCGGCACGTGTGCGCCGTTACCAAGGCTCTCGCCCAGTATCCCCTCAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000561564.5
ENST00000561903.6
ENST00000565326.1
ENST00000568449.7
ENST00000570069.5
CDS CCA 90 bp GGGCCGGGCGGTGGTCTCGGGGGAGATCCAGGGCACCCAGTGGGTTaGGCCAGAGATCTGAAGATGAGAACGTGTGGCACAGTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: GPGGGLGGDPGHPVG*ARDLKMRTCGTVVH
Trigger: GTGAACAACTGTGCCACACGTTCTCATCTTCAGATCTCTGGCCCAACCCACTGGGTGCCCTGGATCTCCCCCGAGACCACCGCCCGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561564.5
CDS-3UTR CAA 90 bp ACGTTCACCTGGAAGCTGGTGGCGCCCATGTCATGGTCCCCTGTGGCTTCTCCTGGTCCTGAGCATGAGTaGCAGCCGCCGCAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: TFTWKLVAPMSWSPVASPGPEHE*QPPQGS
Trigger: GGAGCCTTGCGGCGGCTGCAACTCATGCTCAGGACC...AGGAGAAGCCACAGGGGACCATGACATGGGCGCCACCAGCTTCCAGGTGAACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp GCCTGTAGTGGGCACTGGGCAGTAGGACCCTGTGGTGAGCCAGGTCTGCTCAGGGGCAGTGGGGTAGAGTaGTCTGGGCCTGCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: ACSGHWAVGPCGEPGLLRGSGVE*SGPALS
Trigger: AGACAAGGCAGGCCCAGACAACTCTACCCCACTGCC...CCTGAGCAGACCTGGCTCACCACAGGGTCCTACTGCCCAGTGCCCACTACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp CTGGGAGGGGTGGGCTCCTCTCCTCTGAGTGAGGACTCCCTAAGCCCGGTGGGTACACACGCATGCTGCTaGTCCTCTGTCACCATGGGC +
Preference number: 5 (lower is better)
Translates to: LGGVGSSPLSEDSLSPVGTHACC*SSVTMG
Trigger: GCCCATGGTGACAGAGGACAAGCAGCATGCGTGTGT...ACCCACCGGGCTTAGGGAGTCCTCACTCAGAGGAGAGGAGCCCACCCCTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACCACTCCAGGGCGGAGTaGGATGAGGCCCGTCCGGAG +
Preference number: 5 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHHSRAE*DEARPE
Trigger: CTCCGGACGGGCCTCATCCAACTCCGCCCTGGAGTG...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTAACATGCTTGTGGGCTTaGCAGGCAGAGCTACCTGCC +
Preference number: 5 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLTCLWA*QAELPA
Trigger: GGCAGGTAGCTCTGCCTGCAAAGCCCACAAGCATGT...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGGATTCCCGGTACTGCTaGAGGGGATACTGGGCGAGA +
Preference number: 5 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVDSRYC*RGYWAR
Trigger: TCTCGCCCAGTATCCCCTCAAGCAGTACCGGGAATC...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp AGGGTGTCTGGTCTGTCCCCAAGGCTGCATGCTGTCCTGGTGGTCCCACGTGTGAGCAGGAGATCAGGGTaGGCTGTGGTCAGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RVSGLSPRLHAVLVVPRVSRRSG*AVVRKR
Trigger: CCTCTTCCTGACCACAGCCAACCCTGATCTCCTGCT...CACACGTGGGACCACCAGGACAGCATGCAGCCTTGGGGACAGACCAGACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561903.6
ENST00000564182.1
CDS-3UTR CAA 90 bp ACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCTTGTTAACTTGCTGGTaGTCTTACCAGACGCTTCTT +
Preference number: 5 (lower is better)
Translates to: TSAHPSSREPRPCQRKRCLLTCW*SYQTLL
Trigger: AAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAA...GCAGCGCTTCCTCTGGCAGGGCCGAGGCTCGCGACTGCTGGGGTGGGCGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp GGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGGCAGGTGGAGAGGTTGGCAGTaGCTTTTGGTTCATTCAACA +
Preference number: 5 (lower is better)
Translates to: GQSEASFCSSLHSAHRGRWRGWQ*LLVHST
Trigger: TGTTGAATGAACCAAAAGCAACTGCCAACCTCTCCA...CCTGCCCCGGTGGGCCGAGTGCAGGCTGCTACAGAAGGAGGCCTCGCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp CACACAGCCTCAGGGGTGACAGGACCTCAGAACACACTGCATTCTTCACTGTGCGGAGGGAGCCATCTCTaGCTCCCGAGGCTGGGACAG +
Preference number: 5 (lower is better)
Translates to: HTASGVTGPQNTLHSSLCGGSHL*LPRLGQ
Trigger: CTGTCCCAGCCTCGGGAGCAAGAGATGGCTCCCTCC...GCACAGTGAAGAATGCAGTGTGTTCTGAGGTCCTGTCACCCCTGAGGCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACTGGGCCTGCAGTCTGTaGTGGGCAGGAGGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHWACSL*WAGGRQ
Trigger: CTGCCTACCTCCTGCCCACAACAGACTGCAGGCCCA...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp GCCTGCAGTGCAGGTGCTCAGTTCTGTGCCCGGGCTCCTGACTCAGGGGGTCTACGACACATGTGCTGCTaGTCCTGTGTCACCAAATGG +
Preference number: 5 (lower is better)
Translates to: ACSAGAQFCARAPDSGGLRHMCC*SCVTKW
Trigger: CCATTTGGTGACACAGGACAAGCAGCACATGTGTCG...TAGACCCCCTGAGTCAGGAGCCCGGGCACAGAACTGAGCACCTGCACTGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp CCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCCCAGTAAGACTCTTTAATTaGGCAAAGGACACACACAGC +
Preference number: 5 (lower is better)
Translates to: PEAFWSPGWAPVRPLQSPVRLFN*AKDTHS
Trigger: GCTGTGTGTGTCCTTTGCCAAATTAAAGAGTCTTAC...TGGGGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp GCTCCTGAAGCGTTCTGGAGCCCTGGCTGGGCACCGGTGCGGCCCCTGCAGTCCGGTTGGCAGTTGCTTTaGGTTCATTCAACAGAAATT +
Preference number: 5 (lower is better)
Translates to: APEAFWSPGWAPVRPLQSGWQLL*VHSTEI
Trigger: AATTTCTGTTGAATGAACCAAAAGCAACTGCCAACC...GGACTGCAGGGGCCGCACCGGTGCCCAGCCAGGGCTCCAGAACGCTTCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp GGTGGGAGGAGGCCAAGAATCAGGACCAAGGAGAACTTCAGTGAAGCAAAAGAATTCCGGGGCGGCTGCTaGTGTGACCTGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GGRRPRIRTKENFSEAKEFRGGC*CDLVLL
Trigger: GAGCAGCACCAGGTCACACAAGCAGCCGCCCCGGAA...TTCTTTTGCTTCACTGAAGTTCTCCTTGGTCCTGATTCTTGGCCTCCTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp ATGCTTCTGAGGCTAGAGGACCAGTCCAAACCTGGGCCTGTCTCCTGGATGCACGCTGTGAGTCTTCCTTaGCCCAGAGCCTGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: MLLRLEDQSKPGPVSWMHAVSLP*PRACVF
Trigger: GAAAACACAGGCTCTGGGCAAAGGAAGACTCACAGC...GTGCATCCAGGAGACAGGCCCAGGTTTGGACTGGTCCTCTAGCCTCAGAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp AGACGCTTCTTCTGCCAGTACAAACGCATACTCTTTGTTCACATATATGTGTGTCCTGAGCCCCAGGTCTaGTGGGAGGCTGCGAGGACG +
Preference number: 5 (lower is better)
Translates to: RRFFCQYKRILFVHIYVCPEPQV*WEAART
Trigger: CGTCCTCGCAGCCTCCCACAAGACCTGGGGCTCAGG...ACACACATATATGTGAACAAAGAGTATGCGTTTGTACTGGCAGAAGAAGCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp AGACGCTTCTTCTGCCAGTACAAACGCATACTCTTTGTTCACATATATGTGTGTGTAGCACGTCCAGGTTaGCCCAGAGCTGCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: RRFFCQYKRILFVHIYVCVARPG*PRAAGV
Trigger: TACTCCTGCAGCTCTGGGCAAACCTGGACGTGCTAC...ACACACATATATGTGAACAAAGAGTATGCGTTTGTACTGGCAGAAGAAGCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp ATTGTTAACTTGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGTACAAACGCATCGGTTTTTCCTAACTaGCTCTGCATGCTGTCAGCG +
Preference number: 5 (lower is better)
Translates to: IVNLLVVLPDASSASTNASVFPN*LCMLSA
Trigger: CGCTGACAGCATGCAGAGCAAGTTAGGAAAAACCGA...TGCGTTTGTACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp ATTGTTAACTTGCTGGTTGTCTTACCAGACGCTTCTTCTGCCAGTACAAACGCATCTACCTGGGTTTTATaGAGCTGCTCAGATCCTGGA +
Preference number: 5 (lower is better)
Translates to: IVNLLVVLPDASSASTNASTWVL*SCSDPG
Trigger: TCCAGGATCTGAGCAGCTCAATAAAACCCAGGTAGA...TGCGTTTGTACTGGCAGAAGAAGCGTCTGGTAAGACAACCAGCAAGTTAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS-3UTR CAA 90 bp AGACGCTTCTTCTGCCAGTACAAACGCATACTCTTTGTTCACATATATGTGTGTGTGACCATTGTTAACTaGCTGGTTGTCTTACCAGAC +
Preference number: 5 (lower is better)
Translates to: RRFFCQYKRILFVHIYVCVTIVN*LVVLPD
Trigger: GTCTGGTAAGACAACCAGCAAGTTAACAATGGTCAC...ACACACATATATGTGAACAAAGAGTATGCGTTTGTACTGGCAGAAGAAGCGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561903.6
CDS GCA 72 bp GGGCCGACGTGCGCCGCGAGAGCCGCCTCTTGCAGCTaGTCGGCCGCCTCCCGCTCTTCGGCCTGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: GPTCAARAASCS*SAASRSSAWAA
Trigger: GGCGGCCCAGGCCGAAGAGCGGGAGGCGGCCGAGCAGCTGCAAGAGGCGGCTCTCGCGGCGCACGTCGGCCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS GCA 72 bp CTGGACGCCGGCTGCCGGTCCGGGCCTGGGCCGACGTaGGCCGCGAGAGCCGCCTCTTGCAGCTGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: LDAGCRSGPGPT*AARAASCSCSA
Trigger: GGCCGAGCAGCTGCAAGAGGCGGCTCTCGCGGCGCACGTCGGCCCAGGCCCGGACCGGCAGCCGGCGTCCAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS CCA 72 bp CTCGCTCGGGTCCACCGCAGGCTGCGGGCCGGGCGCTaGGGCTCGATGCGGCACTCGCAGCCCAGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LARVHRRLRAGR*GSMRHSQPRAS
Trigger: GGAGGCCCTGGGCTGCGAGTGCCGCATCGAGCCCCAGCGCCCGGCCCGCAGCCTGCGGTGGACCCGAGCGAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568449.7
ENST00000570069.5
CDS GCA 72 bp GGGCCTGGGCCGACGTGCGCCGCGAGAGCCGCCTCTTaGAGCTGCTCGGCCGCCTCCCGCTCTTCGGCCTGG +
Preference number: 6 (lower is better)
Translates to: GPGPTCAARAAS*SCSAASRSSAW
Trigger: CCAGGCCGAAGAGCGGGAGGCGGCCGAGCAGCTGCAAGAGGCGGCTCTCGCGGCGCACGTCGGCCCAGGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS CCA 72 bp CGGCCGTTCTCTGGACGCCGGCTGCCGGTCCGGGCCTaGGCCGACGTGCGCCGCGAGAGCCGCCTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: RPFSGRRLPVRA*ADVRRESRLLQ
Trigger: CTGCAAGAGGCGGCTCTCGCGGCGCACGTCGGCCCAGGCCCGGACCGGCAGCCGGCGTCCAGAGAACGGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS TCA 72 bp AGCTGGCCCGCCGCGTGCGCGCCCTGCGGGAGCAACTaGACAGGCCGCGCGACTCCCAGCTCTACGCGGTGG +
Preference number: 6 (lower is better)
Translates to: SWPAACAPCGSN*TGRATPSSTRW
Trigger: CCACCGCGTAGAGCTGGGAGTCGCGCGGCCTGTTCAGTTGCTCCCGCAGGGCGCGCACGCGGCGGGCCAGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS GCA 72 bp CTGCCTGATCTGCCTCCGCCAGGCCGCCTGCAGCCCTaGGCCGTCTCTTGCCACTGGCTCGCCGGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: LPDLPPPGRLQP*AVSCHWLAGCP
Trigger: TGGGCAGCCGGCGAGCCAGTGGCAAGAGACGGCGCAGGGCTGCAGGCGGCCTGGCGGAGGCAGATCAGGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000565326.1
ENST00000568449.7
ENST00000570069.5
CDS GCA 72 bp GAAGGTCGGCCAGGAGGCCCATGCGCTCCCGCTCCGTaGTGCAGGCCTCCAGCGCCTGCTGCAGAAGGCGGG +
Preference number: 6 (lower is better)
Translates to: EGRPGGPCAPAP*CRPPAPAAEGG
Trigger: CCCGCCTTCTGCAGCAGGCGCTGGAGGCCTGCAGCACGGAGCGGGAGCGCATGGGCCTCCTGGCCGACCTTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS GCA 72 bp GCTGTGTCCACGCACACCGCGAGGCGCTTCAGGACCTaGTCCGGCCGCAGCAGCCGCAACGCCTCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: AVSTHTARRFRT*SGRSSRNASAA
Trigger: GGCTGCCGAGGCGTTGCGGCTGCTGCGGCCGGAGCAGGTCCTGAAGCGCCTCGCGGTGTGCGTGGACACAGC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568449.7
ENST00000570069.5
CDS CCA 72 bp TGCTCGGCCGCCTCCCGCTCTTCGGCCTGGGCCGCCTaGTCACGCGCAAGTCCTGGCTGTGGCAGCACGACG +
Preference number: 6 (lower is better)
Translates to: CSAASRSSAWAA*SRASPGCGSTT
Trigger: CGTCGTGCTGCCACAGCCAGGACTTGCGCGTGACCAGGCGGCCCAGGCCGAAGAGCGGGAGGCGGCCGAGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS CCA 72 bp CGCGGTGGACTACGAGACCTTGACGCGGCCGTTCTCTaGACGCCGGCTGCCGGTCCGGGCCTGGGCCGACGT +
Preference number: 6 (lower is better)
Translates to: RGGLRDLDAAVL*TPAAGPGLGRR
Trigger: ACGTCGGCCCAGGCCCGGACCGGCAGCCGGCGTCCAGAGAACGGCCGCGTCAAGGTCTCGTAGTCCACCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS CCA 72 bp AAGAGACCCCCGCCCTCCCGGGTCCAACCCGCGCCATaGCCGGACCGACCTCTTCCTCGCTTCCGGCCGCGA +
Preference number: 6 (lower is better)
Translates to: KRPPPSRVQPAP*PDRPLPRFRPR
Trigger: TCGCGGCCGGAAGCGAGGAAGAGGTCGGTCCGGCCATGGCGCGGGTTGGACCCGGGAGGGCGGGGGTCTCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS TCA 72 bp CGTGCTGGCGAGACCACAGGTAGGCATCCAGCCCGATaGCAGCCAGGTGGGGCCGGGCGGTGGTCTCGGGGG +
Preference number: 6 (lower is better)
Translates to: RAGETTGRHPAR*QPGGAGRWSRG
Trigger: CCCCCGAGACCACCGCCCGGCCCCACCTGGCTGTCATCGGGCTGGATGCCTACCTGTGGTCTCGCCAGCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561564.5
ENST00000568449.7
CDS GCA 72 bp GCCACGGCTGGGCTGACCCGACTGAACTGCCTGATCTaGCTCCGCCAGGCCGCCTGCAGCCCTGCGCCGTCT +
Preference number: 6 (lower is better)
Translates to: ATAGLTRLNCLI*LRQAACSPAPS
Trigger: AGACGGCGCAGGGCTGCAGGCGGCCTGGCGGAGGCAGATCAGGCAGTTCAGTCGGGTCAGCCCAGCCGTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS GCA 72 bp AGAGGCAGATGCGGCGGGAGAGGTCAGGCCCCACCCTaGGGGGACGCCCGCCTTCACTGGGCGGCACAGGAA +
Preference number: 6 (lower is better)
Translates to: RGRCGGRGQAPP*GDARLHWAAQE
Trigger: TTCCTGTGCCGCCCAGTGAAGGCGGGCGTCCCCGCAGGGTGGGGCCTGACCTCTCCCGCCGCATCTGCCTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS CAA 90 bp AACAGGCCGCGCGACTCCCAGCTCTACGCGGTGGACTACGAGACCTaGACGCGGCCGTTCTCTGGACGCCGGCTGCCGGTCCGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: NRPRDSQLYAVDYET*TRPFSGRRLPVRAW
Trigger: CCAGGCCCGGACCGGCAGCCGGCGTCCAGAGAACGGCCGCGTCAAGGTCTCGTAGTCCACCGCGTAGAGCTGGGAGTCGCGCGGCCTGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS TCA 72 bp ACACCGGCCTCTTCCGGTGACTTCCGGCCGGACCGCTaGGGACGCGGACCCGCCATGGCGCGGAAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: TPASSGDFRPDR*GRGPAMARKKV
Trigger: CACCTTCTTCCGCGCCATGGCGGGTCCGCGTCCTCAGCGGTCCGGCCGGAAGTCACCGGAAGAGGCCGGTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS GCA 72 bp CAGCCCTGCGCCGTCTCTTGCCACTGGCTCGCCGGCTaGCCAGCGCCCTGCTGTGCAGAAGGAGAAGGCCTG +
Preference number: 6 (lower is better)
Translates to: QPCAVSCHWLAG*PAPCCAEGEGL
Trigger: CAGGCCTTCTCCTTCTGCACAGCAGGGCGCTGGGCAGCCGGCGAGCCAGTGGCAAGAGACGGCGCAGGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000565326.1
ENST00000568449.7
ENST00000570069.5
CDS GCA 72 bp CGACTGAACTGCCTGATCTGCCTCCGCCAGGCCGCCTaGAGCCCTGCGCCGTCTCTTGCCACTGGCTCGCCG +
Preference number: 6 (lower is better)
Translates to: RLNCLICLRQAA*SPAPSLATGSP
Trigger: CGGCGAGCCAGTGGCAAGAGACGGCGCAGGGCTGCAGGCGGCCTGGCGGAGGCAGATCAGGCAGTTCAGTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS GCA 72 bp GCCACCTCGGCACCGGCCACCTTCGGGCTCTCTGGCTaGTGTGTCCCCCGGGAAACGTGCTGGCGAGACCAC +
Preference number: 6 (lower is better)
Translates to: ATSAPATFGLSG*CVPRETCWRDH
Trigger: GTGGTCTCGCCAGCACGTTTCCCGGGGGACACAGCAGCCAGAGAGCCCGAAGGTGGCCGGTGCCGAGGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561564.5
ENST00000568449.7
CDS GCA 72 bp GCCACCTCGGCACCGGCCACCTTCGGGCTCTCTGGCTaGTGTGTCCCCCGGGAAACGTGCTGGCGAGACCTG +
Preference number: 6 (lower is better)
Translates to: ATSAPATFGLSG*CVPRETCWRDL
Trigger: CAGGTCTCGCCAGCACGTTTCCCGGGGGACACAGCAGCCAGAGAGCCCGAAGGTGGCCGGTGCCGAGGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565326.1
ENST00000570069.5
CDS CCA 72 bp GACGGCCACCTCGGCACCGGCCACCTTCGGGCTCTCTaGCTGCTGTGTCCCCCGGGAAACGTGCTGGCGAGA +
Preference number: 6 (lower is better)
Translates to: DGHLGTGHLRAL*LLCPPGNVLAR
Trigger: TCTCGCCAGCACGTTTCCCGGGGGACACAGCAGCCAGAGAGCCCGAAGGTGGCCGGTGCCGAGGTGGCCGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000561564.5
ENST00000561903.6
ENST00000565326.1
ENST00000568449.7
ENST00000570069.5
CDS CCA 72 bp CTCTTCGGCCTGGGCCGCCTGGTCACGCGCAAGTCCTaGCTGTGGCAGCACGACGAGCCGTGCTACTGGCGC +
Preference number: 6 (lower is better)
Translates to: LFGLGRLVTRKS*LWQHDEPCYWR
Trigger: GCGCCAGTAGCACGGCTCGTCGTGCTGCCACAGCCAGGACTTGCGCGTGACCAGGCGGCCCAGGCCGAAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS CAA 72 bp CGGAGTCCTCAGCGTCGGAGTCTGAGATCTCCCAGGTaGGAGGTCGCCGCTGACCGCTCCCGCCCCGTCCCC +
Preference number: 6 (lower is better)
Translates to: RSPQRRSLRSPR*EVAADRSRPVP
Trigger: GGGGACGGGGCGGGAGCGGTCAGCGGCGACCTCCAACCTGGGAGATCTCAGACTCCGACGCTGAGGACTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS TCA 72 bp AGAGTGAGCGGTACCACAGGTAGGCATCCAGCCCGATaGCAGCCAGGTGGGGCCGGGCGGTGGTCTCGGGGG +
Preference number: 6 (lower is better)
Translates to: RVSGTTGRHPAR*QPGGAGRWSRG
Trigger: CCCCCGAGACCACCGCCCGGCCCCACCTGGCTGTCATCGGGCTGGATGCCTACCTGTGGTACCGCTCACTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570069.5
CDS TCA 72 bp GCGACTCCCAGCTCTACGCGGTGGACTACGAGACCTTaGCGCGGCCGTTCTCTGGACGCCGGCTGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: ATPSSTRWTTRP*RGRSLDAGCRS
Trigger: GGACCGGCAGCCGGCGTCCAGAGAACGGCCGCGTCAAGGTCTCGTAGTCCACCGCGTAGAGCTGGGAGTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS TCA 72 bp CCGAACACTTTAGCCTGGGACACCGGCCTCTTCCGGTaGCTTCCGGCCGGACCGCTGAGGACGCGGACCCGC +
Preference number: 6 (lower is better)
Translates to: PNTLAWDTGLFR*LPAGPLRTRTR
Trigger: GCGGGTCCGCGTCCTCAGCGGTCCGGCCGGAAGTCACCGGAAGAGGCCGGTGTCCCAGGCTAAAGTGTTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS TCA 72 bp GGCCTCCGAGCCGGCGGAGTCCTCAGCGTCGGAGTCTaGGATCTCCCAGGTTGGAGGTCGCCGCTGACCGCT +
Preference number: 6 (lower is better)
Translates to: GLRAGGVLSVGV*DLPGWRSPLTA
Trigger: AGCGGTCAGCGGCGACCTCCAACCTGGGAGATCTCAGACTCCGACGCTGAGGACTCCGCCGGCTCGGAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS CCA 72 bp CGGGCGGTGGTCTCGGGGGAGATCCAGGGCACCCAGTaGGTTGGGCCAGAGATCTGGGTCAGTGTGGCGACG +
Preference number: 6 (lower is better)
Translates to: RAVVSGEIQGTQ*VGPEIWVSVAT
Trigger: CGTCGCCACACTGACCCAGATCTCTGGCCCAACCCACTGGGTGCCCTGGATCTCCCCCGAGACCACCGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568449.7
ENST00000570069.5
CDS CAA 72 bp CGCGACTCCCAGCTCTACGCGGTGGACTACGAGACCTaGACGCGGCCGTTCTCTGGACGCCGGCTGCCGGTC +
Preference number: 6 (lower is better)
Translates to: RDSQLYAVDYET*TRPFSGRRLPV
Trigger: GACCGGCAGCCGGCGTCCAGAGAACGGCCGCGTCAAGGTCTCGTAGTCCACCGCGTAGAGCTGGGAGTCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568449.7
CDS GCA 72 bp ACTGCATCAGCCACGGCTGGGCTGACCCGACTGAACTaGCTGATCTGCCTCCGCCAGGCCGCCTGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: TASATAGLTRLN*LICLRQAACSP
Trigger: AGGGCTGCAGGCGGCCTGGCGGAGGCAGATCAGGCAGTTCAGTCGGGTCAGCCCAGCCGTGGCTGATGCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS CAA 72 bp CGGTGGTCTCGGGGGAGATCCAGGGCACCCAGTGGGTaGGGCCAGAGATCTGGGTCAGTGTGGCGACGCCCT +
Preference number: 6 (lower is better)
Translates to: RWSRGRSRAPSG*GQRSGSVWRRP
Trigger: AGGGCGTCGCCACACTGACCCAGATCTCTGGCCCAACCCACTGGGTGCCCTGGATCTCCCCCGAGACCACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568449.7
ENST00000570069.5
CDS CAA 90 bp GCCGACTCAGCTCCTGCCAAGAGGCCACCAGTAGCACGTCCAGGTTaGCCCAGAGCTGCAGGAGTACCAGGGCCTCTTCCACCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: ADSAPAKRPPVARPG*PRAAGVPGPLPPPA
Trigger: GGCCGGAGGTGGAAGAGGCCCTGGTACTCCTGCAGCTCTGGGCAAACCTGGACGTGCTACTGGTGGCCTCTTGGCAGGAGCTGAGTCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561564.5
ENST00000561903.6
ENST00000565326.1
ENST00000568449.7
ENST00000570069.5
CDS GCA 72 bp GCCTTGGTAACGGCGCACACGTGCCGACTCAGCTCCTaGCAAGAGGCCACCAGTAGCACGTCCAGGTTTGCC +
Preference number: 6 (lower is better)
Translates to: ALVTAHTCRLSS*QEATSSTSRFA
Trigger: GGCAAACCTGGACGTGCTACTGGTGGCCTCTTGGCAGGAGCTGAGTCGGCACGTGTGCGCCGTTACCAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561564.5
ENST00000561903.6
ENST00000565326.1
ENST00000568449.7
ENST00000570069.5
CDS GCA 72 bp GGATACTGGGCGAGAGCCTTGGTAACGGCGCACACGTaGCGACTCAGCTCCTGCCAAGAGGCCACCAGTAGC +
Preference number: 6 (lower is better)
Translates to: GYWARALVTAHT*RLSSCQEATSS
Trigger: GCTACTGGTGGCCTCTTGGCAGGAGCTGAGTCGGCACGTGTGCGCCGTTACCAAGGCTCTCGCCCAGTATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561564.5
ENST00000561903.6
ENST00000565326.1
ENST00000568449.7
ENST00000570069.5
CDS CCA 72 bp GGAGGGGAAGGCTGTGACAACTGCATCAGCCACGGCTaGGCTGACCCGACTGAACTGCCTGATCTGCCTCCG +
Preference number: 6 (lower is better)
Translates to: GGEGCDNCISHG*ADPTELPDLPP
Trigger: CGGAGGCAGATCAGGCAGTTCAGTCGGGTCAGCCCAGCCGTGGCTGATGCAGTTGTCACAGCCTTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS CCA 72 bp AGGAGCCCAGGTCCAGCAGGAGATCAGGGTTGGCTGTaGTCAGGAAGAGGCAGATGCGGCGGGAGAGGTCAG +
Preference number: 6 (lower is better)
Translates to: RSPGPAGDQGWL*SGRGRCGGRGQ
Trigger: CTGACCTCTCCCGCCGCATCTGCCTCTTCCTGACCACAGCCAACCCTGATCTCCTGCTGGACCTGGGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS CCA 72 bp GTGGTCAGGAGCCCAGGTCCAGCAGGAGATCAGGGTTaGCTGTGGTCAGGAAGAGGCAGATGCGGCGGGAGA +
Preference number: 6 (lower is better)
Translates to: VVRSPGPAGDQG*LWSGRGRCGGR
Trigger: TCTCCCGCCGCATCTGCCTCTTCCTGACCACAGCCAACCCTGATCTCCTGCTGGACCTGGGCTCCTGACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561903.6
ENST00000564182.1
ENST00000568449.7
ENST00000570069.5
CDS CAA 72 bp TCCCGGTACTGCTTGAGGGGATACTGGGCGAGAGCCTaGGTAACGGCGCACACGTGCCGACTCAGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SRYCLRGYWARA*VTAHTCRLSSC
Trigger: GCAGGAGCTGAGTCGGCACGTGTGCGCCGTTACCAAGGCTCTCGCCCAGTATCCCCTCAAGCAGTACCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000561564.5
ENST00000561903.6
ENST00000565326.1
ENST00000568449.7
ENST00000570069.5
CDS CAA 90 bp GGGGCCGGGCGGTGGTCTCGGGGGAGATCCAGGGCACCCAGTGGGTaGGGCCAGAGATCTGAAGATGAGAACGTGTGGCACAGTTGTTCA +
Preference number: 6 (lower is better)
Translates to: GAGRWSRGRSRAPSG*GQRSEDENVWHSCS
Trigger: TGAACAACTGTGCCACACGTTCTCATCTTCAGATCTCTGGCCCAACCCACTGGGTGCCCTGGATCTCCCCCGAGACCACCGCCCGGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561564.5
CDS GCA 72 bp GTTGGGCCAGAGATCTGGGTCAGTGTGGCGACGCCCTaGAGAAACTCCTCGGGCTCCAGCAGCAGCAGCAAT +
Preference number: 6 (lower is better)
Translates to: VGPEIWVSVATP*RNSSGSSSSSN
Trigger: ATTGCTGCTGCTGCTGGAGCCCGAGGAGTTTCTGCAGGGCGTCGCCACACTGACCCAGATCTCTGGCCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568449.7
ENST00000570069.5
CDS GCA 72 bp TCTGCCAGAGCCCACCTGGAGAAGTGGGATCAGCTGTaGCACAGCAACCCCAGAAGTGTGCCCACCTCCCCT +
Preference number: 6 (lower is better)
Translates to: SARAHLEKWDQL*HSNPRSVPTSP
Trigger: AGGGGAGGTGGGCACACTTCTGGGGTTGCTGTGGCACAGCTGATCCCACTTCTCCAGGTGGGCTCTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570069.5
CDS CCA 72 bp CGTGTGGCACAGTTGTTCACAGGAGGCTGCGGCCTATaGCCATGGGCCACCAGGCCACAGCTGGTTTGCAGA +
Preference number: 6 (lower is better)
Translates to: RVAQLFTGGCGL*PWATRPQLVCR
Trigger: TCTGCAAACCAGCTGTGGCCTGGTGGCCCATGGCCATAGGCCGCAGCCTCCTGTGAACAACTGTGCCACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561564.5
CDS CAA 72 bp GCTCCTGCCAAGAGGCCACCAGTAGCACGTCCAGGTTaGCCCAGAGCTGCAGGAGTACCAGGGCCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: APAKRPPVARPG*PRAAGVPGPLP
Trigger: TGGAAGAGGCCCTGGTACTCCTGCAGCTCTGGGCAAACCTGGACGTGCTACTGGTGGCCTCTTGGCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561564.5
ENST00000561903.6
ENST00000565326.1
ENST00000568449.7
ENST00000570069.5
CDS CAA 72 bp CGGTGGTCTCGGGGGAGATCCAGGGCACCCAGTGGGTaGGGCCAGAGATCTGAAGATGAGAACGTGTGGCAC +
Preference number: 6 (lower is better)
Translates to: RWSRGRSRAPSG*GQRSEDENVWH
Trigger: GTGCCACACGTTCTCATCTTCAGATCTCTGGCCCAACCCACTGGGTGCCCTGGATCTCCCCCGAGACCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561564.5
CDS CCA 72 bp GGTGGTCTCGGGGGAGATCCAGGGCACCCAGTGGGTTaGGCCAGAGATCTGAAGATGAGAACGTGTGGCACA +
Preference number: 6 (lower is better)
Translates to: GGLGGDPGHPVG*ARDLKMRTCGT
Trigger: TGTGCCACACGTTCTCATCTTCAGATCTCTGGCCCAACCCACTGGGTGCCCTGGATCTCCCCCGAGACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561564.5
CDS CCA 72 bp AGTGGGTTGGGCCAGAGATCTGAAGATGAGAACGTGTaGCACAGTTGTTCACAGGAGGCTGCGGCCTATGGC +
Preference number: 6 (lower is better)
Translates to: SGLGQRSEDENV*HSCSQEAAAYG
Trigger: GCCATAGGCCGCAGCCTCCTGTGAACAACTGTGCCACACGTTCTCATCTTCAGATCTCTGGCCCAACCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561564.5