RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EMC8 (Homo sapiens)

Ensembl gene IDs: ENSG00000131148

Ensembl transcript IDs: ENST00000253457.8, ENST00000435200.2, ENST00000595980.5, ENST00000596852.1, ENST00000597291.1, ENST00000600807.1

Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTCTGTGGCATCAGTGGTGTCACTCCCGCTGGGCAGAGTTGCGGTaGCTCTGTGAGCCGACACCATGTGGAGCAGTGCTGTTCACAGCC +
Preference number: 1 (lower is better)
Translates to: LLWHQWCHSRWAELR*LCEPTPCGAVLFTA
Trigger: GGCTGTGAACAGCACTGCTCCACATGGTGTCGGCTCACAGAGCCACCGCAACTCTGCCCAGCGGGAGTGACACCACTGATGCCACAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR GCA 90 bp GGGCAGAGTTGCGGTGGCTCTGTGAGCCGACACCATGTGGAGCAGTaGTGTTCACAGCCCAGCCTACCTGACCACAGAAACACCCACACA +
Preference number: 1 (lower is better)
Translates to: GQSCGGSVSRHHVEQ*CSQPSLPDHRNTHT
Trigger: TGTGTGGGTGTTTCTGTGGTCAGGTAGGCTGGGCTGTGAACAGCACTGCTCCACATGGTGTCGGCTCACAGAGCCACCGCAACTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR GCA 90 bp AAAGGCTTCTGTGGCATCAGTGGTGTCACTCCCGCTGGGCAGAGTTaGGGTGGCTCTGTGAGCCGACACCATGTGGAGCAGTGCTGTTCA +
Preference number: 1 (lower is better)
Translates to: KGFCGISGVTPAGQS*GGSVSRHHVEQCCS
Trigger: TGAACAGCACTGCTCCACATGGTGTCGGCTCACAGAGCCACCGCAACTCTGCCCAGCGGGAGTGACACCACTGATGCCACAGAAGCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR TCA 90 bp GAGCCGACACCATGTGGAGCAGTGCTGTTCACAGCCCAGCCTACCTaGCCACAGAAACACCCACACAGAGCTTCTCAAACAGCTCAGCAC +
Preference number: 1 (lower is better)
Translates to: EPTPCGAVLFTAQPT*PQKHPHRASQTAQH
Trigger: GTGCTGAGCTGTTTGAGAAGCTCTGTGTGGGTGTTTCTGTGGTCAGGTAGGCTGGGCTGTGAACAGCACTGCTCCACATGGTGTCGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR TCA 90 bp ACTGCGGCATTGTGCTCCAATCGGGTGACAGTGCGAGACTCCGTCTaGGAGTTGGCAGGGGCAACGCTAGCAATTCCTACCAGGCATTTG +
Preference number: 1 (lower is better)
Translates to: TAALCSNRVTVRDSV*ELAGATLAIPTRHL
Trigger: CAAATGCCTGGTAGGAATTGCTAGCGTTGCCCCTGCCAACTCTCAGACGGAGTCTCGCACTGTCACCCGATTGGAGCACAATGCCGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595980.5
3UTR TCA 90 bp CAGTCACAGCGGTGCCTGCCTAGCACAAGTGTAGGACAGCTTTATTaGTCTCTGGGTTTGTCCAGTCATTCCGAATGTCATCCAGGTGGT +
Preference number: 1 (lower is better)
Translates to: QSQRCLPSTSVGQLY*SLGLSSHSECHPGG
Trigger: ACCACCTGGATGACATTCGGAATGACTGGACAAACCCAGAGATCAATAAAGCTGTCCTACACTTGTGCTAGGCAGGCACCGCTGTGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435200.2
3UTR TCA 90 bp CAAGCAGAAAGAGCTTTGATTTGGAGGATTATAGCAACATACAACTaGGAGAGTCCACAGGGACAGTCAGACGGGATGTCTGCACCTCTT +
Preference number: 1 (lower is better)
Translates to: QAERALIWRIIATYN*ESPQGQSDGMSAPL
Trigger: AAGAGGTGCAGACATCCCGTCTGACTGTCCCTGTGGACTCTCTCAGTTGTATGTTGCTATAATCCTCCAAATCAAAGCTCTTTCTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR TCA 90 bp TTCCCTTTCCTGGCCCTGCAGGCACGTGAGCTTTCTGCGTGGCTGAAGAGCACCGGCCCTGCAGGCACGTaGGCTTTCTGCGTGGCTGAA +
Preference number: 2 (lower is better)
Translates to: FPFLALQARELSAWLKSTGPAGT*AFCVAE
Trigger: TTCAGCCACGCAGAAAGCTCACGTGCCTGCAGGGCC...GGTGCTCTTCAGCCACGCAGAAAGCTCACGTGCCTGCAGGGCCAGGAAAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR GCA 90 bp TTCTCAAACAGCTCAGCACCAGCACTCCACGTGTCTACCCTGATCCCAGGACGCCCCGCTGGGCAGAGTTaGGGTGGCTCTGTGAGCCGA +
Preference number: 2 (lower is better)
Translates to: FSNSSAPALHVSTLIPGRPAGQS*GGSVSR
Trigger: TCGGCTCACAGAGCCACCGCAACTCTGCCCAGCGGG...GCGTCCTGGGATCAGGGTAGACACGTGGAGTGCTGGTGCTGAGCTGTTTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR TCA 90 bp CAGCTCAGCACCAGCACTCCACGTGTCTACCCTGATCCCAGGACGCCTGGACGAAAAAACACGACCGACTaGACATTCTGCCCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: QLSTSTPRVYPDPRTPGRKNTTD*TFCPLS
Trigger: TGAAAGGGGGCAGAATGTTCAGTCGGTCGTGTTTTT...TCGTCCAGGCGTCCTGGGATCAGGGTAGACACGTGGAGTGCTGGTGCTGAGCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR TCA 90 bp CTCCTGCTACCAGAGATGTCTGCTTTTGCCCCTAACGATAAAGGCTTCTGTGGCGTTGCGGTGGCTCTGTaGGCCGACACCATGTGGAGC +
Preference number: 2 (lower is better)
Translates to: LLLPEMSAFAPNDKGFCGVAVAL*ADTMWS
Trigger: GCTCCACATGGTGTCGGCTCACAGAGCCACCGCAAC...GCCACAGAAGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTGGTAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR TCA 90 bp CTTTTGCCCCTAACGATAAAGGCTTCTGTGGCATCAGTGGTGTCACTCCCGCTGACAGCCCAGCCTACCTaGCCACAGAAACACCCACAC +
Preference number: 2 (lower is better)
Translates to: LLPLTIKASVASVVSLPLTAQPT*PQKHPH
Trigger: GTGTGGGTGTTTCTGTGGTCAGGTAGGCTGGGCTGT...CAGCGGGAGTGACACCACTGATGCCACAGAAGCCTTTATCGTTAGGGGCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR TCA 90 bp ACTGAACATTCTGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTGTCCAGGAGCGAGGCTaGGATCCTCTGTGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: TEHSAPFQGTCHFLKRSAVQERG*DPLCLW
Trigger: CCAGAGGCACAGAGGATCTCAGCCTCGCTCCTGGAC...AGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCAGAATGTTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435200.2
3UTR CAA 90 bp CTGAAGAGCACCACACTGAGCTCCTGCTACCAGAGATGTCTGCTTTaGCCCCTAACGATAAAGGCTTCTGTGGCATCAGTGGTGTCACTC +
Preference number: 2 (lower is better)
Translates to: LKSTTLSSCYQRCLL*PLTIKASVASVVSL
Trigger: GAGTGACACCACTGATGCCACAGAAGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTGGTAGCAGGAGCTCAGTGTGGTGCTCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR TCA 90 bp CTGAGAGAGTCCACAGGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACAAAAACACGACCGACTaGACATTCTGCCCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: LRESTGTVRRDVCTSSRDKNTTD*TFCPLS
Trigger: TGAAAGGGGGCAGAATGTTCAGTCGGTCGTGTTTTT...GTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCCTGTGGACTCTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR TCA 90 bp ATCACAAACCCTTTCAGGTCACACCGATCGTTACAAATTCCTCCATGGAGTCAATCCACGTGTCTACCCTaGTCCCAGGACGCCTGGACG +
Preference number: 2 (lower is better)
Translates to: ITNPFRSHRSLQIPPWSQSTCLP*SQDAWT
Trigger: CGTCCAGGCGTCCTGGGATCAGGGTAGACACGTGGA...TTGACTCCATGGAGGAATTTGTAACGATCGGTGTGACCTGAAAGGGTTTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR CCA 90 bp ACTGAGCTCCTGCTACCAGAGATGTCTGCTTTTGCCCCTAACGATAAAGGCTTCCGTGAGCTTTCTGCGTaGCTGAAGAGCACCACACTG +
Preference number: 2 (lower is better)
Translates to: TELLLPEMSAFAPNDKGFRELSA*LKSTTL
Trigger: CAGTGTGGTGCTCTTCAGCCACGCAGAAAGCTCACG...GAAGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTGGTAGCAGGAGCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR GCA 90 bp CTACCAGAGATGTCTGCTTTTGCCCCTAACGATAAAGGCTTCTGTGGCATCAGTCACCATGTGGAGCAGTaGTGTTCACAGCCCAGCCTA +
Preference number: 2 (lower is better)
Translates to: LPEMSAFAPNDKGFCGISHHVEQ*CSQPSL
Trigger: TAGGCTGGGCTGTGAACAGCACTGCTCCACATGGTG...ACTGATGCCACAGAAGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR CCA 90 bp AACGATCATTTCCCTTTCCTGGCCCTGCAGGCACGTGAGCTTTCTGCGTGGCTGAGCTTTATTGATCTCTaGGTTTGTCCAGTCATTCCG +
Preference number: 2 (lower is better)
Translates to: NDHFPFLALQARELSAWLSFIDL*VCPVIP
Trigger: CGGAATGACTGGACAAACCCAGAGATCAATAAAGCT...CAGCCACGCAGAAAGCTCACGTGCCTGCAGGGCCAGGAAAGGGAAATGATCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435200.2
3UTR-3UTR GCA 90 bp GAGATGTCTGCTTTTGCCCCTAACGATAAAGGCTTCTGTGGCATCAGTGGTGTCGTCAGACGGGATGTCTaGACCTCTTCTAGAGACTCT +
Preference number: 2 (lower is better)
Translates to: EMSAFAPNDKGFCGISGVVRRDV*TSSRDS
Trigger: AGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGAC...GACACCACTGATGCCACAGAAGCCTTTATCGTTAGGGGCAAAAGCAGACATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR CCA 90 bp AATGTTCTAAGTATAAAAAGTACAGACGTCACTCTGCACAACTCGGGAAGTCTATGGGCAGAGTTGCGGTaGCTCTGTGAGCCGACACCA +
Preference number: 2 (lower is better)
Translates to: NVLSIKSTDVTLHNSGSLWAELR*LCEPTP
Trigger: TGGTGTCGGCTCACAGAGCCACCGCAACTCTGCCCA...TAGACTTCCCGAGTTGTGCAGAGTGACGTCTGTACTTTTTATACTTAGAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR TCA 90 bp CCTGATCCCAGGACGCCTGGACGACATCAAAATTCAAACAGGATAAAAACTCACATAGCAACATACAACTaGGAGAGTCCACAGGGACAG +
Preference number: 2 (lower is better)
Translates to: PDPRTPGRHQNSNRIKTHIATYN*ESPQGQ
Trigger: CTGTCCCTGTGGACTCTCTCAGTTGTATGTTGCTAT...GTGAGTTTTTATCCTGTTTGAATTTTGATGTCGTCCAGGCGTCCTGGGATCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR CCA 90 bp AGAAACGATCATTTCCCTTTCCTGGCCCTGCAGGCACGTGAGCTTTCTGCGTGGGAAAGAGCTTTGATTTaGAGGATTATAGCAACATAC +
Preference number: 2 (lower is better)
Translates to: RNDHFPFLALQARELSAWERALI*RIIATY
Trigger: GTATGTTGCTATAATCCTCCAAATCAAAGCTCTTTC...CCACGCAGAAAGCTCACGTGCCTGCAGGGCCAGGAAAGGGAAATGATCGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR CCA 90 bp ACCGCTGTATCACAAACCCTTTCAGGTCACACCGATCGTTACAAATTCCTCCATCGAATGTCATCCAGGTaGTTATCGAAATCCACGAGC +
Preference number: 2 (lower is better)
Translates to: TAVSQTLSGHTDRYKFLHRMSSR*LSKSTS
Trigger: GCTCGTGGATTTCGATAACCACCTGGATGACATTCG...ATGGAGGAATTTGTAACGATCGGTGTGACCTGAAAGGGTTTGTGATACAGCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435200.2
3UTR-3UTR TCA 90 bp CTGTTTAATAGGAACAATCTTGCACAAGCAGAAAGAGCTTTGATTTGGAGGATTATAGCAACATACAACTaGGAGAGTCCACAGGGACAG +
Preference number: 2 (lower is better)
Translates to: LFNRNNLAQAERALIWRIIATYN*ESPQGQ
Trigger: CTGTCCCTGTGGACTCTCTCAGTTGTATGTTGCTAT...AATCCTCCAAATCAAAGCTCTTTCTGCTTGTGCAAGATTGTTCCTATTAAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR GCA 90 bp TGCACAAGCAGAAAGAGCTTTGATTTGGAGGATTATAGCAACATACAACTGAGACCCTTTCAAGGCACATaGCACTTCTTAAAACGGTCA +
Preference number: 2 (lower is better)
Translates to: CTSRKSFDLEDYSNIQLRPFQGT*HFLKRS
Trigger: TGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGG...TCTCAGTTGTATGTTGCTATAATCCTCCAAATCAAAGCTCTTTCTGCTTGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR GCA 90 bp CAAAACTTGACCAAATGTTCTAAGTATAAAAAGTACAGACGTCACTCTGCACAACCCTTTCAAGGCACATaGCACTTCTTAAAACGGTCA +
Preference number: 2 (lower is better)
Translates to: QNLTKCSKYKKYRRHSAQPFQGT*HFLKRS
Trigger: TGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGG...TTGTGCAGAGTGACGTCTGTACTTTTTATACTTAGAACATTTGGTCAAGTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR CCA 90 bp CAAAACTTGACCAAATGTTCTAAGTATAAAAAGTACAGACGTCACTCTGCACAAGAAAGAGCTTTGATTTaGAGGATTATAGCAACATAC +
Preference number: 2 (lower is better)
Translates to: QNLTKCSKYKKYRRHSAQERALI*RIIATY
Trigger: GTATGTTGCTATAATCCTCCAAATCAAAGCTCTTTC...TTGTGCAGAGTGACGTCTGTACTTTTTATACTTAGAACATTTGGTCAAGTTTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR CAA 90 bp AACGATCATTTCCCTTTCCTGGCCCTGCAGGCACGTGAGCTTTCTGCGTGGCTGTCCCGCTGGGCAGAGTaGCGGTGGCTCTGTGAGCCG +
Preference number: 3 (lower is better)
Translates to: NDHFPFLALQARELSAWLSRWAE*RWLCEP
Trigger: CGGCTCACAGAGCCACCGCAACTCTGCCCAGCGGGA...CAGCCACGCAGAAAGCTCACGTGCCTGCAGGGCCAGGAAAGGGAAATGATCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR TCA 72 bp GTGTCACTCCCGCTGGGCAGAGTTGCGGTGGCTCTGTaGGCCGACACCATGTGGAGCAGTGCTGTTCACAGC +
Preference number: 3 (lower is better)
Translates to: VSLPLGRVAVAL*ADTMWSSAVHS
Trigger: GCTGTGAACAGCACTGCTCCACATGGTGTCGGCTCACAGAGCCACCGCAACTCTGCCCAGCGGGAGTGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR GCA 72 bp TGTGGCATCAGTGGTGTCACTCCCGCTGGGCAGAGTTaGGGTGGCTCTGTGAGCCGACACCATGTGGAGCAG +
Preference number: 3 (lower is better)
Translates to: CGISGVTPAGQS*GGSVSRHHVEQ
Trigger: CTGCTCCACATGGTGTCGGCTCACAGAGCCACCGCAACTCTGCCCAGCGGGAGTGACACCACTGATGCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR TCA 72 bp GAGCGTCTCGTAGGACCGGCTGTCCAGGAGCGAGGCTaGGATCCTCTGTGCCTCTGGCCAGTCTTCACAGTA +
Preference number: 3 (lower is better)
Translates to: ERLVGPAVQERG*DPLCLWPVFTV
Trigger: TACTGTGAAGACTGGCCAGAGGCACAGAGGATCTCAGCCTCGCTCCTGGACAGCCGGTCCTACGAGACGCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435200.2
3UTR GCA 72 bp TGCGGTGGCTCTGTGAGCCGACACCATGTGGAGCAGTaGTGTTCACAGCCCAGCCTACCTGACCACAGAAAC +
Preference number: 3 (lower is better)
Translates to: CGGSVSRHHVEQ*CSQPSLPDHRN
Trigger: GTTTCTGTGGTCAGGTAGGCTGGGCTGTGAACAGCACTGCTCCACATGGTGTCGGCTCACAGAGCCACCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR TCA 72 bp TTGTGCTCCAATCGGGTGACAGTGCGAGACTCCGTCTaGGAGTTGGCAGGGGCAACGCTAGCAATTCCTACC +
Preference number: 3 (lower is better)
Translates to: LCSNRVTVRDSV*ELAGATLAIPT
Trigger: GGTAGGAATTGCTAGCGTTGCCCCTGCCAACTCTCAGACGGAGTCTCGCACTGTCACCCGATTGGAGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595980.5
3UTR TCA 72 bp AAACGATCATTTCCCTTTCCTGGCCCTGCAGGCACGTaGGCTTTCTGCGTGGCTGAAGAGCACCACACTGAG +
Preference number: 3 (lower is better)
Translates to: KRSFPFPGPAGT*AFCVAEEHHTE
Trigger: CTCAGTGTGGTGCTCTTCAGCCACGCAGAAAGCTCACGTGCCTGCAGGGCCAGGAAAGGGAAATGATCGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR CAA 90 bp TTGCGGTGGCTCTGTGAGCCGACACCATGTGGAGCAGTGCTGTTCACAGCCCAGCAAGCAGAAAGAGCTTaGATTTGGAGGATTATAGCA +
Preference number: 3 (lower is better)
Translates to: LRWLCEPTPCGAVLFTAQQAERA*IWRIIA
Trigger: TGCTATAATCCTCCAAATCAAAGCTCTTTCTGCTTG...CTGGGCTGTGAACAGCACTGCTCCACATGGTGTCGGCTCACAGAGCCACCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR GCA 72 bp CTGAGAGAGTCCACAGGGACAGTCAGACGGGATGTCTaGACCTCTTCTAGAGACTCTGTGTTAAAAACACGA +
Preference number: 3 (lower is better)
Translates to: LRESTGTVRRDV*TSSRDSVLKTR
Trigger: TCGTGTTTTTAACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCCTGTGGACTCTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR TCA 72 bp AGAGCTTTGATTTGGAGGATTATAGCAACATACAACTaGGAGAGTCCACAGGGACAGTCAGACGGGATGTCT +
Preference number: 3 (lower is better)
Translates to: RALIWRIIATYN*ESPQGQSDGMS
Trigger: AGACATCCCGTCTGACTGTCCCTGTGGACTCTCTCAGTTGTATGTTGCTATAATCCTCCAAATCAAAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR-3UTR CAA 90 bp CAAAACTTGACCAAATGTTCTAAGTATAAAAAGTACAGACGTCACTCTGCACAATGTAGGACAGCTTTATaGATCTCTGGGTTTGTCCAG +
Preference number: 3 (lower is better)
Translates to: QNLTKCSKYKKYRRHSAQCRTAL*ISGFVQ
Trigger: CTGGACAAACCCAGAGATCAATAAAGCTGTCCTACA...TTGTGCAGAGTGACGTCTGTACTTTTTATACTTAGAACATTTGGTCAAGTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435200.2
CDS-3UTR GCA 90 bp TCTCGTAGGACCGGCTGTCCAGGAGCGAGGCTGAGATCCTCTGTGCCTCTGGCCCCGCCCAGGGGGAGGTaGTCCTTACGCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SRRTGCPGARLRSSVPLAPPRGR*SLRGFC
Trigger: GCAGAAGCCGCGTAAGGAGCACCTCCCCCTGGGCGG...GGCCAGAGGCACAGAGGATCTCAGCCTCGCTCCTGGACAGCCGGTCCTACGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435200.2
CDS-3UTR TCA 90 bp GTTTTCTTCTTCAACGTAGTGGAAAGGCCCGGAGCCCAGTCACAGCGGTGCCTGTCACCCCGGGCATGCTaGCCCGGGAGGGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: VFFFNVVERPGAQSQRCLSPRAC*PGRAPE
Trigger: CTCCGGGGCCCTCCCGGGTCAGCATGCCCGGGGTGA...CAGGCACCGCTGTGACTGGGCTCCGGGCCTTTCCACTACGTTGAAGAAGAAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp TTGCGGTGGCTCTGTGAGCCGACACCATGTGGAGCAGTGCTGTTCACAGCCCAGGGGCGAGGGCCAGGGTaGCGTGGAAGAGGGGGATGC +
Preference number: 4 (lower is better)
Translates to: LRWLCEPTPCGAVLFTAQGRGPG*RGRGGC
Trigger: GCATCCCCCTCTTCCACGGCACCCTGGCCCTCGCCC...CTGGGCTGTGAACAGCACTGCTCCACATGGTGTCGGCTCACAGAGCCACCGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp CAGGTGGTTATCGAAATCCACGAGCGTCTCGTAGGACCGGCTGTCCAGGAGCGACCGTTGACGGCGCAGTaGGGGTACTTGGCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: QVVIEIHERLVGPAVQERPLTAQ*GYLAPC
Trigger: GCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGG...TCGCTCCTGGACAGCCGGTCCTACGAGACGCTCGTGGATTTCGATAACCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435200.2
CDS-3UTR GCA 90 bp TCTCGTAGGACCGGCTGTCCAGGAGCGAGGCTGAGATCCTCTGTGCCTCTGGCCTCCCTTTCCTGGCCCTaGAGGCACGTGAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SRRTGCPGARLRSSVPLASLSWP*RHVSFL
Trigger: CAGAAAGCTCACGTGCCTGCAGGGCCAGGAAAGGGA...GGCCAGAGGCACAGAGGATCTCAGCCTCGCTCCTGGACAGCCGGTCCTACGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435200.2
3UTR CAA 72 bp CTGTGGCATCAGTGGTGTCACTCCCGCTGGGCAGAGTaGCGGTGGCTCTGTGAGCCGACACCATGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LWHQWCHSRWAE*RWLCEPTPCGA
Trigger: TGCTCCACATGGTGTCGGCTCACAGAGCCACCGCAACTCTGCCCAGCGGGAGTGACACCACTGATGCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp TGCGGCATTGTGCTCCAATCGGGTGACAGTGCGAGACTCCGTCTGAGAGTTGGCGTCCAGGAGCGAGGCTaGGATCCTCTGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CGIVLQSGDSARLRLRVGVQERG*DPLCLW
Trigger: CCAGAGGCACAGAGGATCTCAGCCTCGCTCCTGGAC...GCCAACTCTCAGACGGAGTCTCGCACTGTCACCCGATTGGAGCACAATGCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS-3UTR TCA 90 bp TTCCCTTTCCTGGCCCTGCAGGCACGTGAGCTTTCTGCGTGGCTGAAGAGCACCACAGCCCAGCCTACCTaGCCACAGAAACACCCACAC +
Preference number: 4 (lower is better)
Translates to: FPFLALQARELSAWLKSTTAQPT*PQKHPH
Trigger: GTGTGGGTGTTTCTGTGGTCAGGTAGGCTGGGCTGT...GGTGCTCTTCAGCCACGCAGAAAGCTCACGTGCCTGCAGGGCCAGGAAAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp AGTCCACAGGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTAGCCTCTCCAACGCCTaGCGGAAAGCAGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SPQGQSDGMSAPLLETLCSLSNA*RKAARP
Trigger: GGGCCGGGCTGCTTTCCGGCAGGCGTTGGAGAGGCT...ACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCCTGTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435200.2
CDS-3UTR CCA 90 bp CAGCTCAGCACCAGCACTCCACGTGTCTACCCTGATCCCAGGACGCCTGGACGACGTGAGCTTTCTGCGTaGCTGAAGAGCACCACACTG +
Preference number: 4 (lower is better)
Translates to: QLSTSTPRVYPDPRTPGRRELSA*LKSTTL
Trigger: CAGTGTGGTGCTCTTCAGCCACGCAGAAAGCTCACG...TCGTCCAGGCGTCCTGGGATCAGGGTAGACACGTGGAGTGCTGGTGCTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp CTCCTGCTACCAGAGATGTCTGCTTTTGCCCCTAACGATAAAGGCTTCTGTGGCCCACCAGGAGCCCGTTaGCGGCGCAGTGCGGGTACT +
Preference number: 4 (lower is better)
Translates to: LLLPEMSAFAPNDKGFCGPPGAR*RRSAGT
Trigger: AGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGG...GCCACAGAAGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTGGTAGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp CTGAGAGAGTCCACAGGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCCACGTGTCTACCCTaGTCCCAGGACGCCTGGACG +
Preference number: 4 (lower is better)
Translates to: LRESTGTVRRDVCTSSRDSTCLP*SQDAWT
Trigger: CGTCCAGGCGTCCTGGGATCAGGGTAGACACGTGGA...GTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCCTGTGGACTCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp AGAAACGATCATTTCCCTTTCCTGGCCCTGCAGGCACGTGAGCTTTCTGCGTGGTTGGGCCTCGGCTCCTaGAAAAGCGACTCGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RNDHFPFLALQARELSAWLGLGS*KSDSRL
Trigger: GAGGCGCGAGTCGCTTTTCCAGGAGCCGAGGCCCAA...CCACGCAGAAAGCTCACGTGCCTGCAGGGCCAGGAAAGGGAAATGATCGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp CTTTTGCCCCTAACGATAAAGGCTTCTGTGGCATCAGTGGTGTCACTCCCGCTGGTTGCGGTGGCTCTGTaGGCCGACACCATGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LLPLTIKASVASVVSLPLVAVAL*ADTMWS
Trigger: GCTCCACATGGTGTCGGCTCACAGAGCCACCGCAAC...CAGCGGGAGTGACACCACTGATGCCACAGAAGCCTTTATCGTTAGGGGCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp CTCCGTCTGAGAGTTGGCAGGGGCAACGCTAGCAATTCCTACCAGGCATTTGATGTGCGAGACTCCGTCTaGGAGTTGGCAGGGGCAACG +
Preference number: 4 (lower is better)
Translates to: LRLRVGRGNASNSYQAFDVRDSV*ELAGAT
Trigger: CGTTGCCCCTGCCAACTCTCAGACGGAGTCTCGCAC...ATCAAATGCCTGGTAGGAATTGCTAGCGTTGCCCCTGCCAACTCTCAGACGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS-3UTR GCA 90 bp GTTTTCTTCTTCAACGTAGTGGAAAGGCCCGGAGCCCAGTCACAGCGGTGCCTGCGTGCAGCACCATCTTaGAGTAGGCCTGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: VFFFNVVERPGAQSQRCLRAAPS*SRPGWS
Trigger: TGACCACCCAGGCCTACTGCAAGATGGTGCTGCACG...CAGGCACCGCTGTGACTGGGCTCCGGGCCTTTCCACTACGTTGAAGAAGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp TTGCGGTGGCTCTGTGAGCCGACACCATGTGGAGCAGTGCTGTTCACAGCCCAGCATGGTGTGGGTCTCTaGACCGCCATCTGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LRWLCEPTPCGAVLFTAQHGVGL*TAICSH
Trigger: ATGAGAACAGATGGCGGTGCAGAGACCCACACCATG...CTGGGCTGTGAACAGCACTGCTCCACATGGTGTCGGCTCACAGAGCCACCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253457.8
CDS-3UTR GCA 90 bp AACGATCATTTCCCTTTCCTGGCCCTGCAGGCACGTGAGCTTTCTGCGTGGCTGTCCCTTTCCTGGCCCTaGAGGCACGTGAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: NDHFPFLALQARELSAWLSLSWP*RHVSFL
Trigger: CAGAAAGCTCACGTGCCTGCAGGGCCAGGAAAGGGA...CAGCCACGCAGAAAGCTCACGTGCCTGCAGGGCCAGGAAAGGGAAATGATCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp GACTGCGGCATTGTGCTCCAATCGGGTGACAGTGCGAGACTCCGTCTGAGAGTTTGGTGCTCGTACACGTaGATCGTAGGCGCTACGCAG +
Preference number: 4 (lower is better)
Translates to: DCGIVLQSGDSARLRLRVWCSYT*IVGATQ
Trigger: CTGCGTAGCGCCTACGATCCACGTGTACGAGCACCA...AACTCTCAGACGGAGTCTCGCACTGTCACCCGATTGGAGCACAATGCCGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS-3UTR CCA 90 bp AGTCCACAGGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTTGGTGTCACTCCCGCTaGGCAGAGTTGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SPQGQSDGMSAPLLETLCWCHSR*AELRWL
Trigger: GAGCCACCGCAACTCTGCCCAGCGGGAGTGACACCA...ACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCCTGTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp ACTGAACATTCTGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTCCACCAGGAGCCCGTTaGCGGCGCAGTGCGGGTACT +
Preference number: 4 (lower is better)
Translates to: TEHSAPFQGTCHFLKRSAPPGAR*RRSAGT
Trigger: AGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGG...AGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCAGAATGTTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp TGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTTTCCACACAGGGTTGCGGTGGCTCTGTaGGCCGACACCATGTGGAGC +
Preference number: 4 (lower is better)
Translates to: CPLSRHMPLLKTVSFPHRVAVAL*ADTMWS
Trigger: GCTCCACATGGTGTCGGCTCACAGAGCCACCGCAAC...CCTGTGTGGAAAGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp TGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTTTCCACACAGGGGCCCTGCAGGCACGTaGGCTTTCTGCGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: CPLSRHMPLLKTVSFPHRGPAGT*AFCVAE
Trigger: TTCAGCCACGCAGAAAGCTCACGTGCCTGCAGGGCC...CCTGTGTGGAAAGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp ACCTCTTCTAGAGACTCTGTGTTAAAAACACGACCGACTGAACATTCTGCCCCCCCGTTGACGGCGCAGTaGGGGTACTTGGCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: TSSRDSVLKTRPTEHSAPPLTAQ*GYLAPC
Trigger: GCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGG...GGGGGCAGAATGTTCAGTCGGTCGTGTTTTTAACACAGAGTCTCTAGAAGAGGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp TGCGGCATTGTGCTCCAATCGGGTGACAGTGCGAGACTCCGTCTGAGAGTTGGCCATGGTGTGGGTCTCTaGACCGCCATCTGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: CGIVLQSGDSARLRLRVGHGVGL*TAICSH
Trigger: ATGAGAACAGATGGCGGTGCAGAGACCCACACCATG...GCCAACTCTCAGACGGAGTCTCGCACTGTCACCCGATTGGAGCACAATGCCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS-3UTR CCA 90 bp AAAATAGGTTTTCTTCTTCAACGTAGTGGAAAGGCCCGGAGCCCAGTCACAGCGAGGCCCGGCCCCGTTTaGGCCTCGGCTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KIGFLLQRSGKARSPVTARPGPV*ASAPGK
Trigger: TTTTCCAGGAGCCGAGGCCCAAACGGGGCCGGGCCT...CGCTGTGACTGGGCTCCGGGCCTTTCCACTACGTTGAAGAAGAAAACCTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp TGCGGCATTGTGCTCCAATCGGGTGACAGTGCGAGACTCCGTCTGAGAGTTGGCCGCCATCTGTTCTCATaGTGCTCGTACACGTGGATC +
Preference number: 4 (lower is better)
Translates to: CGIVLQSGDSARLRLRVGRHLFS*CSYTWI
Trigger: GATCCACGTGTACGAGCACCATGAGAACAGATGGCG...GCCAACTCTCAGACGGAGTCTCGCACTGTCACCCGATTGGAGCACAATGCCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS-3UTR TCA 90 bp CAGCTCAGCACCAGCACTCCACGTGTCTACCCTGATCCCAGGACGCCTGGACGAATGATCTTTGCACCATaGATCAATCAGGGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: QLSTSTPRVYPDPRTPGRMIFAP*INQGES
Trigger: GCTCTCACCCTGATTGATTCATGGTGCAAAGATCAT...TCGTCCAGGCGTCCTGGGATCAGGGTAGACACGTGGAGTGCTGGTGCTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp CTCCGTCTGAGAGTTGGCAGGGGCAACGCTAGCAATTCCTACCAGGCATTTGATTGTGCTCCAATCGGGTaGCAGTGCGAGACTCCGTCT +
Preference number: 4 (lower is better)
Translates to: LRLRVGRGNASNSYQAFDCAPIG*QCETPS
Trigger: AGACGGAGTCTCGCACTGTCACCCGATTGGAGCACA...ATCAAATGCCTGGTAGGAATTGCTAGCGTTGCCCCTGCCAACTCTCAGACGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS-3UTR GCA 90 bp TACCCTGATCCCAGGACGCCTGGACGACATCAAAATTCAAACAGGATAAAAACTGGGCGAGGGCCAGGGTaGCGTGGAAGAGGGGGATGC +
Preference number: 4 (lower is better)
Translates to: YPDPRTPGRHQNSNRIKTGRGPG*RGRGGC
Trigger: GCATCCCCCTCTTCCACGGCACCCTGGCCCTCGCCC...AGTTTTTATCCTGTTTGAATTTTGATGTCGTCCAGGCGTCCTGGGATCAGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp GGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTTAAAAACACCCGCTGGGCAGAGTTaGGGTGGCTCTGTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: GTVRRDVCTSSRDSVLKTPAGQS*GGSVSR
Trigger: TCGGCTCACAGAGCCACCGCAACTCTGCCCAGCGGG...TGTTTTTAACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp GACAGTGCGAGACTCCGTCTGAGAGTTGGCAGGGGCAACGCTAGCAATTCCTACACAGTAGTCATGGTGTaGGTCTCTGCACCGCCATCT +
Preference number: 4 (lower is better)
Translates to: DSARLRLRVGRGNASNSYTVVMV*VSAPPS
Trigger: AGATGGCGGTGCAGAGACCCACACCATGACTACTGT...GTAGGAATTGCTAGCGTTGCCCCTGCCAACTCTCAGACGGAGTCTCGCACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS-3UTR CCA 90 bp CAATCGGGTGACAGTGCGAGACTCCGTCTGAGAGTTGGCAGGGGCAACGCTAGCCGAATGTCATCCAGGTaGTTATCGAAATCCACGAGC +
Preference number: 4 (lower is better)
Translates to: QSGDSARLRLRVGRGNASRMSSR*LSKSTS
Trigger: GCTCGTGGATTTCGATAACCACCTGGATGACATTCG...GCTAGCGTTGCCCCTGCCAACTCTCAGACGGAGTCTCGCACTGTCACCCGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS-3UTR CCA 90 bp CTCCTGCTACCAGAGATGTCTGCTTTTGCCCCTAACGATAAAGGCTTCTGTGGCTGGGCAGAGTTGCGGTaGCTCTGTGAGCCGACACCA +
Preference number: 4 (lower is better)
Translates to: LLLPEMSAFAPNDKGFCGWAELR*LCEPTP
Trigger: TGGTGTCGGCTCACAGAGCCACCGCAACTCTGCCCA...GCCACAGAAGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTGGTAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp GAACATTCTGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTTTCGTCCAGGAGCGAGGCTaGGATCCTCTGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: EHSAPFQGTCHFLKRSAFVQERG*DPLCLW
Trigger: CCAGAGGCACAGAGGATCTCAGCCTCGCTCCTGGAC...GAAAGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCAGAATGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp AGTCCACAGGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTCACCATGTGGAGCAGTaGTGTTCACAGCCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: SPQGQSDGMSAPLLETLCHHVEQ*CSQPSL
Trigger: TAGGCTGGGCTGTGAACAGCACTGCTCCACATGGTG...ACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCCTGTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp CCTGATCCCAGGACGCCTGGACGACATCAAAATTCAAACAGGATAAAAACTCACAGGCCCGGCCCCGTTTaGGCCTCGGCTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PDPRTPGRHQNSNRIKTHRPGPV*ASAPGK
Trigger: TTTTCCAGGAGCCGAGGCCCAAACGGGGCCGGGCCT...GTGAGTTTTTATCCTGTTTGAATTTTGATGTCGTCCAGGCGTCCTGGGATCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp CTCCTGCTACCAGAGATGTCTGCTTTTGCCCCTAACGATAAAGGCTTCTGTGGCTGGTGCTCGTACACGTaGATCGTAGGCGCTACGCAG +
Preference number: 4 (lower is better)
Translates to: LLLPEMSAFAPNDKGFCGWCSYT*IVGATQ
Trigger: CTGCGTAGCGCCTACGATCCACGTGTACGAGCACCA...GCCACAGAAGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTGGTAGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253457.8
CDS-3UTR CCA 90 bp CTCCTGCTACCAGAGATGTCTGCTTTTGCCCCTAACGATAAAGGCTTCTGTGGCCTTCTGTGGCATCAGTaGTGTCACTCCCGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLLPEMSAFAPNDKGFCGLLWHQ*CHSRWA
Trigger: TGCCCAGCGGGAGTGACACCACTGATGCCACAGAAG...GCCACAGAAGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTGGTAGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp AAACTGTTTAATAGGAACAATCTTGCACAAGCAGAAAGAGCTTTGATTTGGAGGTCACCCCGGGCATGCTaGCCCGGGAGGGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: KLFNRNNLAQAERALIWRSPRAC*PGRAPE
Trigger: CTCCGGGGCCCTCCCGGGTCAGCATGCCCGGGGTGA...CCTCCAAATCAAAGCTCTTTCTGCTTGTGCAAGATTGTTCCTATTAAACAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp CTACCAGAGATGTCTGCTTTTGCCCCTAACGATAAAGGCTTCTGTGGCATCAGTTCCTTACGCGGCTTCTaGTTCTCGGCCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPEMSAFAPNDKGFCGISSLRGF*FSATRS
Trigger: GCTCCTGGTGGCCGAGAAGCAGAAGCCGCGTAAGGA...ACTGATGCCACAGAAGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp GACAGTGCGAGACTCCGTCTGAGAGTTGGCAGGGGCAACGCTAGCAATTCCTACCATCTGTTCTCATGGTaGTCGTACACGTGGATCGTA +
Preference number: 4 (lower is better)
Translates to: DSARLRLRVGRGNASNSYHLFSW*SYTWIV
Trigger: TACGATCCACGTGTACGAGCACCATGAGAACAGATG...GTAGGAATTGCTAGCGTTGCCCCTGCCAACTCTCAGACGGAGTCTCGCACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS-3UTR CCA 90 bp ACTGAACATTCTGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTTGCAGTAGGCCTGGGTaGTCAGTTTCACCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: TEHSAPFQGTCHFLKRSACSRPG*SVSPRA
Trigger: TGCCCGGGGTGAAACTGACCACCCAGGCCTACTGCA...AGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCAGAATGTTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp ACTGAACATTCTGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTTGGGCAGAGTTGCGGTaGCTCTGTGAGCCGACACCA +
Preference number: 4 (lower is better)
Translates to: TEHSAPFQGTCHFLKRSAWAELR*LCEPTP
Trigger: TGGTGTCGGCTCACAGAGCCACCGCAACTCTGCCCA...AGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCAGAATGTTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp CCTGATCCCAGGACGCCTGGACGACATCAAAATTCAAACAGGATAAAAACTCACTGGTGTCACTCCCGCTaGGCAGAGTTGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PDPRTPGRHQNSNRIKTHWCHSR*AELRWL
Trigger: GAGCCACCGCAACTCTGCCCAGCGGGAGTGACACCA...GTGAGTTTTTATCCTGTTTGAATTTTGATGTCGTCCAGGCGTCCTGGGATCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp TGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTTTCCACACAGGATGAATCAATCAGGGTaGGAGCCACCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: CPLSRHMPLLKTVSFPHRMNQSG*EPPPAW
Trigger: CCATGCTGGAGGTGGCTCTCACCCTGATTGATTCAT...CCTGTGTGGAAAGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp AACGATCATTTCCCTTTCCTGGCCCTGCAGGCACGTGAGCTTTCTGCGTGGCTGATGATCTTTGCACCATaGATCAATCAGGGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: NDHFPFLALQARELSAWLMIFAP*INQGES
Trigger: GCTCTCACCCTGATTGATTCATGGTGCAAAGATCAT...CAGCCACGCAGAAAGCTCACGTGCCTGCAGGGCCAGGAAAGGGAAATGATCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp TCTGTGTTAAAAACACGACCGACTGAACATTCTGCCCCCTTTCAAGGCACATGCCGTGCAGCACCATCTTaGAGTAGGCCTGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SVLKTRPTEHSAPFQGTCRAAPS*SRPGWS
Trigger: TGACCACCCAGGCCTACTGCAAGATGGTGCTGCACG...GCATGTGCCTTGAAAGGGGGCAGAATGTTCAGTCGGTCGTGTTTTTAACACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp GGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTTAAAAACAAGCCCTCGGCGATTCTaGAGGCCACCTTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: GTVRRDVCTSSRDSVLKTSPRRF*RPPSLQ
Trigger: TTGCAGAGAAGGTGGCCTCCAGAATCGCCGAGGGCT...TGTTTTTAACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp TGCGGCATTGTGCTCCAATCGGGTGACAGTGCGAGACTCCGTCTGAGAGTTGGCAGCTTTATTGATCTCTaGGTTTGTCCAGTCATTCCG +
Preference number: 4 (lower is better)
Translates to: CGIVLQSGDSARLRLRVGSFIDL*VCPVIP
Trigger: CGGAATGACTGGACAAACCCAGAGATCAATAAAGCT...GCCAACTCTCAGACGGAGTCTCGCACTGTCACCCGATTGGAGCACAATGCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS-3UTR TCA 90 bp AGTCCACAGGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTATAGCAACATACAACTaGGAGAGTCCACAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SPQGQSDGMSAPLLETLCIATYN*ESPQGQ
Trigger: CTGTCCCTGTGGACTCTCTCAGTTGTATGTTGCTAT...ACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCCTGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp TGCACAAGCAGAAAGAGCTTTGATTTGGAGGATTATAGCAACATACAACTGAGACCGCCCAGGGGGAGGTaGTCCTTACGCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CTSRKSFDLEDYSNIQLRPPRGR*SLRGFC
Trigger: GCAGAAGCCGCGTAAGGAGCACCTCCCCCTGGGCGG...TCTCAGTTGTATGTTGCTATAATCCTCCAAATCAAAGCTCTTTCTGCTTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp AGTCCACAGGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTCATCTGTTCTCATGGTaGTCGTACACGTGGATCGTA +
Preference number: 4 (lower is better)
Translates to: SPQGQSDGMSAPLLETLCHLFSW*SYTWIV
Trigger: TACGATCCACGTGTACGAGCACCATGAGAACAGATG...ACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCCTGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253457.8
CDS-3UTR GCA 90 bp GAACATTCTGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTTTCCACCATGTGGAGCAGTaGTGTTCACAGCCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: EHSAPFQGTCHFLKRSAFHHVEQ*CSQPSL
Trigger: TAGGCTGGGCTGTGAACAGCACTGCTCCACATGGTG...GAAAGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCAGAATGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp AGTCCACAGGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTCGAATGTCATCCAGGTaGTTATCGAAATCCACGAGC +
Preference number: 4 (lower is better)
Translates to: SPQGQSDGMSAPLLETLCRMSSR*LSKSTS
Trigger: GCTCGTGGATTTCGATAACCACCTGGATGACATTCG...ACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCCTGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp TCTGTGTTAAAAACACGACCGACTGAACATTCTGCCCCCTTTCAAGGCACATGCATCATTTCCCTTTCCTaGCCCTGCAGGCACGTGAGC +
Preference number: 4 (lower is better)
Translates to: SVLKTRPTEHSAPFQGTCIISLS*PCRHVS
Trigger: GCTCACGTGCCTGCAGGGCCAGGAAAGGGAAATGAT...GCATGTGCCTTGAAAGGGGGCAGAATGTTCAGTCGGTCGTGTTTTTAACACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR CAA 72 bp ACCACACTGAGCTCCTGCTACCAGAGATGTCTGCTTTaGCCCCTAACGATAAAGGCTTCTGTGGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: TTLSSCYQRCLL*PLTIKASVASV
Trigger: CACTGATGCCACAGAAGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTGGTAGCAGGAGCTCAGTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp ATCACAAACCCTTTCAGGTCACACCGATCGTTACAAATTCCTCCATGGAGTCAAAGCCCTCGGCGATTCTaGAGGCCACCTTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: ITNPFRSHRSLQIPPWSQSPRRF*RPPSLQ
Trigger: TTGCAGAGAAGGTGGCCTCCAGAATCGCCGAGGGCT...TTGACTCCATGGAGGAATTTGTAACGATCGGTGTGACCTGAAAGGGTTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp GAACATTCTGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTTTCCGCCATCTGTTCTCATaGTGCTCGTACACGTGGATC +
Preference number: 4 (lower is better)
Translates to: EHSAPFQGTCHFLKRSAFRHLFS*CSYTWI
Trigger: GATCCACGTGTACGAGCACCATGAGAACAGATGGCG...GAAAGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCAGAATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253457.8
CDS-3UTR TCA 90 bp TGCACAAGCAGAAAGAGCTTTGATTTGGAGGATTATAGCAACATACAACTGAGATCCACGTGTCTACCCTaGTCCCAGGACGCCTGGACG +
Preference number: 4 (lower is better)
Translates to: CTSRKSFDLEDYSNIQLRSTCLP*SQDAWT
Trigger: CGTCCAGGCGTCCTGGGATCAGGGTAGACACGTGGA...TCTCAGTTGTATGTTGCTATAATCCTCCAAATCAAAGCTCTTTCTGCTTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp AATGTTCTAAGTATAAAAAGTACAGACGTCACTCTGCACAACTCGGGAAGTCTAGGCCCTGCAGGCACGTaGGCTTTCTGCGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: NVLSIKSTDVTLHNSGSLGPAGT*AFCVAE
Trigger: TTCAGCCACGCAGAAAGCTCACGTGCCTGCAGGGCC...TAGACTTCCCGAGTTGTGCAGAGTGACGTCTGTACTTTTTATACTTAGAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp AATGTTCTAAGTATAAAAAGTACAGACGTCACTCTGCACAACTCGGGAAGTCTATTGGGCCTCGGCTCCTaGAAAAGCGACTCGCGCCTC +
Preference number: 4 (lower is better)
Translates to: NVLSIKSTDVTLHNSGSLLGLGS*KSDSRL
Trigger: GAGGCGCGAGTCGCTTTTCCAGGAGCCGAGGCCCAA...TAGACTTCCCGAGTTGTGCAGAGTGACGTCTGTACTTTTTATACTTAGAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp AATGTTCTAAGTATAAAAAGTACAGACGTCACTCTGCACAACTCGGGAAGTCTACGCAGTGCGGGTACTTaGCGCCGTGCAGCACCATCT +
Preference number: 4 (lower is better)
Translates to: NVLSIKSTDVTLHNSGSLRSAGT*RRAAPS
Trigger: AGATGGTGCTGCACGGCGCCAAGTACCCGCACTGCG...TAGACTTCCCGAGTTGTGCAGAGTGACGTCTGTACTTTTTATACTTAGAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp ACAGGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTTAAAACTCTGCAACCTGGTTTaGACTGGCATCCTTTACTCG +
Preference number: 4 (lower is better)
Translates to: TGTVRRDVCTSSRDSVLKLCNLV*TGILYS
Trigger: CGAGTAAAGGATGCCAGTCCAAACCAGGTTGCAGAG...TTTTAACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp AAACTGTTTAATAGGAACAATCTTGCACAAGCAGAAAGAGCTTTGATTTGGAGGGTCCAGGAGCGAGGCTaGGATCCTCTGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KLFNRNNLAQAERALIWRVQERG*DPLCLW
Trigger: CCAGAGGCACAGAGGATCTCAGCCTCGCTCCTGGAC...CCTCCAAATCAAAGCTCTTTCTGCTTGTGCAAGATTGTTCCTATTAAACAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp ACTGAACATTCTGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTAAAAACACGACCGACTaGACATTCTGCCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: TEHSAPFQGTCHFLKRSAKNTTD*TFCPLS
Trigger: TGAAAGGGGGCAGAATGTTCAGTCGGTCGTGTTTTT...AGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCAGAATGTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp CAAAACTTGACCAAATGTTCTAAGTATAAAAAGTACAGACGTCACTCTGCACAACCCGCTGGGCAGAGTTaGGGTGGCTCTGTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: QNLTKCSKYKKYRRHSAQPAGQS*GGSVSR
Trigger: TCGGCTCACAGAGCCACCGCAACTCTGCCCAGCGGG...TTGTGCAGAGTGACGTCTGTACTTTTTATACTTAGAACATTTGGTCAAGTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp GAACAATCTTGCACAAGCAGAAAGAGCTTTGATTTGGAGGATTATAGCAACATACGCAGTGCGGGTACTTaGCGCCGTGCAGCACCATCT +
Preference number: 4 (lower is better)
Translates to: EQSCTSRKSFDLEDYSNIRSAGT*RRAAPS
Trigger: AGATGGTGCTGCACGGCGCCAAGTACCCGCACTGCG...TATGTTGCTATAATCCTCCAAATCAAAGCTCTTTCTGCTTGTGCAAGATTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp ACCTCTTCTAGAGACTCTGTGTTAAAAACACGACCGACTGAACATTCTGCCCCCCAACCTGGTTTGGACTaGCATCCTTTACTCGCTCAT +
Preference number: 4 (lower is better)
Translates to: TSSRDSVLKTRPTEHSAPQPGLD*HPLLAH
Trigger: ATGAGCGAGTAAAGGATGCCAGTCCAAACCAGGTTG...GGGGGCAGAATGTTCAGTCGGTCGTGTTTTTAACACAGAGTCTCTAGAAGAGGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp GGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTTAAAAACACGAATGTCATCCAGGTaGTTATCGAAATCCACGAGC +
Preference number: 4 (lower is better)
Translates to: GTVRRDVCTSSRDSVLKTRMSSR*LSKSTS
Trigger: GCTCGTGGATTTCGATAACCACCTGGATGACATTCG...TGTTTTTAACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp ACCGCTGTATCACAAACCCTTTCAGGTCACACCGATCGTTACAAATTCCTCCATAAAAACACGACCGACTaGACATTCTGCCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: TAVSQTLSGHTDRYKFLHKNTTD*TFCPLS
Trigger: TGAAAGGGGGCAGAATGTTCAGTCGGTCGTGTTTTT...ATGGAGGAATTTGTAACGATCGGTGTGACCTGAAAGGGTTTGTGATACAGCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp TCTTCTAGAGACTCTGTGTTAAAAACACGACCGACTGAACATTCTGCCCCCTTTCTCTGCAACCTGGTTTaGACTGGCATCCTTTACTCG +
Preference number: 4 (lower is better)
Translates to: SSRDSVLKTRPTEHSAPFLCNLV*TGILYS
Trigger: CGAGTAAAGGATGCCAGTCCAAACCAGGTTGCAGAG...AAAGGGGGCAGAATGTTCAGTCGGTCGTGTTTTTAACACAGAGTCTCTAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp TCTTCTAGAGACTCTGTGTTAAAAACACGACCGACTGAACATTCTGCCCCCTTTATAGCAACATACAACTaGGAGAGTCCACAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SSRDSVLKTRPTEHSAPFIATYN*ESPQGQ
Trigger: CTGTCCCTGTGGACTCTCTCAGTTGTATGTTGCTAT...AAAGGGGGCAGAATGTTCAGTCGGTCGTGTTTTTAACACAGAGTCTCTAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR TCA 90 bp GAACAATCTTGCACAAGCAGAAAGAGCTTTGATTTGGAGGATTATAGCAACATAACAGCCCAGCCTACCTaGCCACAGAAACACCCACAC +
Preference number: 4 (lower is better)
Translates to: EQSCTSRKSFDLEDYSNITAQPT*PQKHPH
Trigger: GTGTGGGTGTTTCTGTGGTCAGGTAGGCTGGGCTGT...TATGTTGCTATAATCCTCCAAATCAAAGCTCTTTCTGCTTGTGCAAGATTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp CTGTTTAATAGGAACAATCTTGCACAAGCAGAAAGAGCTTTGATTTGGAGGATTCGTGGAAGAGGGGGATaGAGTCCACGAAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LFNRNNLAQAERALIWRIRGRGG*SPRRGC
Trigger: ACACCCTCTTCGTGGACTGCATCCCCCTCTTCCACG...AATCCTCCAAATCAAAGCTCTTTCTGCTTGTGCAAGATTGTTCCTATTAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp GAACATTCTGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTTTCCGTAGCTATGATCTTTaGACCATGAATCAATCAGGG +
Preference number: 4 (lower is better)
Translates to: EHSAPFQGTCHFLKRSAFRSYDL*TMNQSG
Trigger: CCCTGATTGATTCATGGTGCAAAGATCATAGCTACG...GAAAGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCAGAATGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp ACTGAACATTCTGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTAGCTTTATTGATCTCTaGGTTTGTCCAGTCATTCCG +
Preference number: 4 (lower is better)
Translates to: TEHSAPFQGTCHFLKRSASFIDL*VCPVIP
Trigger: CGGAATGACTGGACAAACCCAGAGATCAATAAAGCT...AGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCAGAATGTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp AGTCCACAGGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTGAAAGAGCTTTGATTTaGAGGATTATAGCAACATAC +
Preference number: 4 (lower is better)
Translates to: SPQGQSDGMSAPLLETLCERALI*RIIATY
Trigger: GTATGTTGCTATAATCCTCCAAATCAAAGCTCTTTC...ACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCCTGTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp AAACTGTTTAATAGGAACAATCTTGCACAAGCAGAAAGAGCTTTGATTTGGAGGCTTCTGTGGCATCAGTaGTGTCACTCCCGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KLFNRNNLAQAERALIWRLLWHQ*CHSRWA
Trigger: TGCCCAGCGGGAGTGACACCACTGATGCCACAGAAG...CCTCCAAATCAAAGCTCTTTCTGCTTGTGCAAGATTGTTCCTATTAAACAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp CAAAACTTGACCAAATGTTCTAAGTATAAAAAGTACAGACGTCACTCTGCACAACGTGGAAGAGGGGGATaGAGTCCACGAAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QNLTKCSKYKKYRRHSAQRGRGG*SPRRGC
Trigger: ACACCCTCTTCGTGGACTGCATCCCCCTCTTCCACG...TTGTGCAGAGTGACGTCTGTACTTTTTATACTTAGAACATTTGGTCAAGTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp TACCCTGATCCCAGGACGCCTGGACGACATCAAAATTCAAACAGGATAAAAACTCCCTTTCAAGGCACATaGCACTTCTTAAAACGGTCA +
Preference number: 4 (lower is better)
Translates to: YPDPRTPGRHQNSNRIKTPFQGT*HFLKRS
Trigger: TGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGG...AGTTTTTATCCTGTTTGAATTTTGATGTCGTCCAGGCGTCCTGGGATCAGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp ACCGCTGTATCACAAACCCTTTCAGGTCACACCGATCGTTACAAATTCCTCCATAGCTTTATTGATCTCTaGGTTTGTCCAGTCATTCCG +
Preference number: 4 (lower is better)
Translates to: TAVSQTLSGHTDRYKFLHSFIDL*VCPVIP
Trigger: CGGAATGACTGGACAAACCCAGAGATCAATAAAGCT...ATGGAGGAATTTGTAACGATCGGTGTGACCTGAAAGGGTTTGTGATACAGCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp AAACTGTTTAATAGGAACAATCTTGCACAAGCAGAAAGAGCTTTGATTTGGAGGCGTGAGCTTTCTGCGTaGCTGAAGAGCACCACACTG +
Preference number: 4 (lower is better)
Translates to: KLFNRNNLAQAERALIWRRELSA*LKSTTL
Trigger: CAGTGTGGTGCTCTTCAGCCACGCAGAAAGCTCACG...CCTCCAAATCAAAGCTCTTTCTGCTTGTGCAAGATTGTTCCTATTAAACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp CTGTTTAATAGGAACAATCTTGCACAAGCAGAAAGAGCTTTGATTTGGAGGATTACAGTAGTCATGGTGTaGGTCTCTGCACCGCCATCT +
Preference number: 4 (lower is better)
Translates to: LFNRNNLAQAERALIWRITVVMV*VSAPPS
Trigger: AGATGGCGGTGCAGAGACCCACACCATGACTACTGT...AATCCTCCAAATCAAAGCTCTTTCTGCTTGTGCAAGATTGTTCCTATTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253457.8
CDS-3UTR CCA 90 bp CAAAACTTGACCAAATGTTCTAAGTATAAAAAGTACAGACGTCACTCTGCACAAATCATTTCCCTTTCCTaGCCCTGCAGGCACGTGAGC +
Preference number: 4 (lower is better)
Translates to: QNLTKCSKYKKYRRHSAQIISLS*PCRHVS
Trigger: GCTCACGTGCCTGCAGGGCCAGGAAAGGGAAATGAT...TTGTGCAGAGTGACGTCTGTACTTTTTATACTTAGAACATTTGGTCAAGTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp CTGTTTAATAGGAACAATCTTGCACAAGCAGAAAGAGCTTTGATTTGGAGGATTGTCAGACGGGATGTCTaGACCTCTTCTAGAGACTCT +
Preference number: 4 (lower is better)
Translates to: LFNRNNLAQAERALIWRIVRRDV*TSSRDS
Trigger: AGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGAC...AATCCTCCAAATCAAAGCTCTTTCTGCTTGTGCAAGATTGTTCCTATTAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp TGCACAAGCAGAAAGAGCTTTGATTTGGAGGATTATAGCAACATACAACTGAGACAACCTGGTTTGGACTaGCATCCTTTACTCGCTCAT +
Preference number: 4 (lower is better)
Translates to: CTSRKSFDLEDYSNIQLRQPGLD*HPLLAH
Trigger: ATGAGCGAGTAAAGGATGCCAGTCCAAACCAGGTTG...TCTCAGTTGTATGTTGCTATAATCCTCCAAATCAAAGCTCTTTCTGCTTGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp ACCTCTTCTAGAGACTCTGTGTTAAAAACACGACCGACTGAACATTCTGCCCCCGAAAGAGCTTTGATTTaGAGGATTATAGCAACATAC +
Preference number: 4 (lower is better)
Translates to: TSSRDSVLKTRPTEHSAPERALI*RIIATY
Trigger: GTATGTTGCTATAATCCTCCAAATCAAAGCTCTTTC...GGGGGCAGAATGTTCAGTCGGTCGTGTTTTTAACACAGAGTCTCTAGAAGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp TCTGTGTTAAAAACACGACCGACTGAACATTCTGCCCCCTTTCAAGGCACATGCCAATTCCCTAAGGTTTaGTTACAAAACTTGACCAAA +
Preference number: 4 (lower is better)
Translates to: SVLKTRPTEHSAPFQGTCQFPKV*LQNLTK
Trigger: TTTGGTCAAGTTTTGTAACCAAACCTTAGGGAATTG...GCATGTGCCTTGAAAGGGGGCAGAATGTTCAGTCGGTCGTGTTTTTAACACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR GCA 90 bp CAAAACTTGACCAAATGTTCTAAGTATAAAAAGTACAGACGTCACTCTGCACAAGTCAGACGGGATGTCTaGACCTCTTCTAGAGACTCT +
Preference number: 4 (lower is better)
Translates to: QNLTKCSKYKKYRRHSAQVRRDV*TSSRDS
Trigger: AGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGAC...TTGTGCAGAGTGACGTCTGTACTTTTTATACTTAGAACATTTGGTCAAGTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CCA 90 bp ACAGCTTTATTGATCTCTGGGTTTGTCCAGTCATTCCGAATGTCATCCAGGTGGCAATTCCCTAAGGTTTaGTTACAAAACTTGACCAAA +
Preference number: 4 (lower is better)
Translates to: TALLISGFVQSFRMSSRWQFPKV*LQNLTK
Trigger: TTTGGTCAAGTTTTGTAACCAAACCTTAGGGAATTG...CCACCTGGATGACATTCGGAATGACTGGACAAACCCAGAGATCAATAAAGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435200.2
CDS-3UTR GCA 90 bp CAAAACTTGACCAAATGTTCTAAGTATAAAAAGTACAGACGTCACTCTGCACAACGTAGCTATGATCTTTaGACCATGAATCAATCAGGG +
Preference number: 4 (lower is better)
Translates to: QNLTKCSKYKKYRRHSAQRSYDL*TMNQSG
Trigger: CCCTGATTGATTCATGGTGCAAAGATCATAGCTACG...TTGTGCAGAGTGACGTCTGTACTTTTTATACTTAGAACATTTGGTCAAGTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
3UTR CAA 72 bp TTTCCCTCTCAATTCCCTAAGGTTTGGTTACAAAACTaGACCAAATGTTCTAAGTATAAAAAGTACAGACGT +
Preference number: 4 (lower is better)
Translates to: FPSQFPKVWLQN*TKCSKYKKYRR
Trigger: ACGTCTGTACTTTTTATACTTAGAACATTTGGTCAAGTTTTGTAACCAAACCTTAGGGAATTGAGAGGGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS CCA 90 bp GAGAAGCGGGACGAGGCGGCGGCGATTGATGGCGCGGCCGCGGGCTaGCGGGGGACCCTTCAGGCCCGGCCCCGTTTGGGCCTCGGCTCC +
Preference number: 5 (lower is better)
Translates to: EKRDEAAAIDGAAAG*RGTLQARPRLGLGS
Trigger: GGAGCCGAGGCCCAAACGGGGCCGGGCCTGAAGGGTCCCCCGCCAGCCCGCGGCCGCGCCATCAATCGCCGCCGCCTCGTCCCGCTTCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS GCA 90 bp TGGGCGCCGGGGCCGCCCAGGGGGAGGTGCTCCTTACGCGGCTTCTaGTTCTCGGCCACCAGGAGCCCGTTGACGGCGCAGTGCGGGTAC +
Preference number: 5 (lower is better)
Translates to: WAPGPPRGRCSLRGF*FSATRSPLTAQCGY
Trigger: GTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAAGCAGAAGCCGCGTAAGGAGCACCTCCCCCTGGGCGGCCCCGGCGCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000435200.2
ENST00000596852.1
CDS CCA 90 bp AGGGTGAGAGCCACCTCCAGCATGGGGGCGAGGGCCAGGGTGCCGTaGAAGAGGGGGATGCAGTCCACGAAGAGGGTGTGGTGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: RVRATSSMGARARVP*KRGMQSTKRVWWAP
Trigger: CGGCGCCCACCACACCCTCTTCGTGGACTGCATCCCCCTCTTCCACGGCACCCTGGCCCTCGCCCCCATGCTGGAGGTGGCTCTCACCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000435200.2
ENST00000596852.1
CDS GCA 90 bp ATGCCAGCCAAACAGCAGCGGCAGGCGCCTCCTCGGGGCTCTCCCTaGAGCCGTGCCCACGCTGGCTGGGGCAGAGACTCTTCCGACAGA +
Preference number: 5 (lower is better)
Translates to: MPAKQQRQAPPRGSP*SRAHAGWGRDSSDR
Trigger: TCTGTCGGAAGAGTCTCTGCCCCAGCCAGCGTGGGCACGGCTGCAGGGAGAGCCCCGAGGAGGCGCCTGCCGCTGCTGTTTGGCTGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS TCA 90 bp GGTGCTCCTTACGCGGCTTCTGCTTCTCGGCCACCAGGAGCCCGTTaGCGGCGCAGTGCGGGTACTTGGCGCCGTGCAGCACCATCTTGC +
Preference number: 5 (lower is better)
Translates to: GAPYAASASRPPGAR*RRSAGTWRRAAPSC
Trigger: GCAAGATGGTGCTGCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAAGCAGAAGCCGCGTAAGGAGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000435200.2
ENST00000596852.1
CDS CCA 90 bp GCGCTGAAGGAGCCCAGCCCGCGCGGCAGCATGGGGCGCACTCACTaGTGTGGGTCTCTGCACCGCCATCTGTTCTCATGGTGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: ALKEPSPRGSMGRTH*CGSLHRHLFSWCSY
Trigger: GTACGAGCACCATGAGAACAGATGGCGGTGCAGAGACCCACACCAGTGAGTGCGCCCCATGCTGCCGCGCGGGCTGGGCTCCTTCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS TCA 90 bp GGGGTTAGCGGAAAGGAAACCGCCGCAGAGCAAGCTCCAGGTTGGTaGGAGGAGGCGCAAGGGCCTCCCACATGCTGCACAGAAGCGACT +
Preference number: 5 (lower is better)
Translates to: GVSGKETAAEQAPGW*EEAQGPPTCCTEAT
Trigger: AGTCGCTTCTGTGCAGCATGTGGGAGGCCCTTGCGCCTCCTCTCACCAACCTGGAGCTTGCTCTGCGGCGGTTTCCTTTCCGCTAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS-3UTR CAA 90 bp TTCTCAAACAGCTCAGCACCAGCACTCCACGTGTCTACCCTGATCCCAGGACGCGCGCAGTGCGGGTACTaGGCGCCGTGCAGCACCATC +
Preference number: 5 (lower is better)
Translates to: FSNSSAPALHVSTLIPGRAQCGY*APCSTI
Trigger: GATGGTGCTGCACGGCGCCAAGTACCCGCACTGCGC...GCGTCCTGGGATCAGGGTAGACACGTGGAGTGCTGGTGCTGAGCTGTTTGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS TCA 90 bp TGTCTGTGCTCTAGCGCCTGGGGTGGGAAGACCTGTGGGTACCACTaGGGTTCCCTCTACTGCCTGGAAGCGCTGGAACACTGGGGCCTA +
Preference number: 5 (lower is better)
Translates to: CLCSSAWGGKTCGYH*GSLYCLEALEHWGL
Trigger: TAGGCCCCAGTGTTCCAGCGCTTCCAGGCAGTAGAGGGAACCTCAGTGGTACCCACAGGTCTTCCCACCCCAGGCGCTAGAGCACAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS CCA 90 bp GGGCGCACTCACTGGTGTGGGTCTCTGCACCGCCATCTGTTCTCATaGTGCTCGTACACGTGGATCGTAGGCGCTACGCAGTCCATCGTA +
Preference number: 5 (lower is better)
Translates to: GRTHWCGSLHRHLFS*CSYTWIVGATQSIV
Trigger: TACGATGGACTGCGTAGCGCCTACGATCCACGTGTACGAGCACCATGAGAACAGATGGCGGTGCAGAGACCCACACCAGTGAGTGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS-3UTR CAA 90 bp TGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTTTCCACACAGGGCCACCAGGAGCCCGTaGACGGCGCAGTGCGGGTAC +
Preference number: 5 (lower is better)
Translates to: CPLSRHMPLLKTVSFPHRATRSP*TAQCGY
Trigger: GTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGC...CCTGTGTGGAAAGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS TCA 90 bp GAAATCCACGAGCGTCTCGTAGGACCGGCTGTCCAGGAGCGAGGCTaGGATCCTCTGTGCCTCTGGCCAGTCTTCACAGTAGTCATGGTG +
Preference number: 5 (lower is better)
Translates to: EIHERLVGPAVQERG*DPLCLWPVFTVVMV
Trigger: CACCATGACTACTGTGAAGACTGGCCAGAGGCACAGAGGATCTCAGCCTCGCTCCTGGACAGCCGGTCCTACGAGACGCTCGTGGATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000595980.5
ENST00000600807.1
CDS TCA 90 bp GAAATCCACGAGCGTCTCGTAGGACCGGCTGTCCAGGAGCGAGGCTaGGATCCTCTGTGCCTCTGGCCAGTCTTCACAGTAGTCACTACG +
Preference number: 5 (lower is better)
Translates to: EIHERLVGPAVQERG*DPLCLWPVFTVVTT
Trigger: CGTAGTGACTACTGTGAAGACTGGCCAGAGGCACAGAGGATCTCAGCCTCGCTCCTGGACAGCCGGTCCTACGAGACGCTCGTGGATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS GCA 90 bp CGCACTCACTGGTGTGGGTCTCTGCACCGCCATCTGTTCTCATGGTaGTCGTACACGTGGATCGTAGGCGCTACGCAGTCCATCGTAAAC +
Preference number: 5 (lower is better)
Translates to: RTHWCGSLHRHLFSW*SYTWIVGATQSIVN
Trigger: GTTTACGATGGACTGCGTAGCGCCTACGATCCACGTGTACGAGCACCATGAGAACAGATGGCGGTGCAGAGACCCACACCAGTGAGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS-3UTR CAA 90 bp GGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTTAAAAACAGCGCAGTGCGGGTACTaGGCGCCGTGCAGCACCATC +
Preference number: 5 (lower is better)
Translates to: GTVRRDVCTSSRDSVLKTAQCGY*APCSTI
Trigger: GATGGTGCTGCACGGCGCCAAGTACCCGCACTGCGC...TGTTTTTAACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CAA 90 bp GGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTTAAAAACATCCCGCTGGGCAGAGTaGCGGTGGCTCTGTGAGCCG +
Preference number: 5 (lower is better)
Translates to: GTVRRDVCTSSRDSVLKTSRWAE*RWLCEP
Trigger: CGGCTCACAGAGCCACCGCAACTCTGCCCAGCGGGA...TGTTTTTAACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CAA 90 bp AGACTCCGTCTGAGAGTTGGCAGGGGCAACGCTAGCAATTCCTACCAGGCATTTAGGCAGGAGAATCGCTaGAACCCAGCAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: RLRLRVGRGNASNSYQAFRQENR*NPAGGG
Trigger: ACCTCCGCCTGCTGGGTTCAAGCGATTCTCCTGCCT...AAATGCCTGGTAGGAATTGCTAGCGTTGCCCCTGCCAACTCTCAGACGGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS GCA 90 bp GGGGTCTGCCCAACACGTGCTCACTTCCTCGCCCACAGAGGGTTCTaGATCCACGTACCTGGCATCCTTTACTCGCTCATTAGCTTGATA +
Preference number: 5 (lower is better)
Translates to: GVCPTRAHFLAHRGF*IHVPGILYSLISLI
Trigger: TATCAAGCTAATGAGCGAGTAAAGGATGCCAGGTACGTGGATGCAGAACCCTCTGTGGGCGAGGAAGTGAGCACGTGTTGGGCAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596852.1
CDS-3UTR CAA 90 bp TCTTCTAGAGACTCTGTGTTAAAAACACGACCGACTGAACATTCTGCCCCCTTTGCCACCAGGAGCCCGTaGACGGCGCAGTGCGGGTAC +
Preference number: 5 (lower is better)
Translates to: SSRDSVLKTRPTEHSAPFATRSP*TAQCGY
Trigger: GTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGC...AAAGGGGGCAGAATGTTCAGTCGGTCGTGTTTTTAACACAGAGTCTCTAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS GCA 90 bp CGCAGTGTCGCTGAAGCCCTCGGCGATTCTGGAGGCCACCTTCTCTaGAACCTGGTTTGGACTGTCAAAGAAATAGGCTACCACATTCCA +
Preference number: 5 (lower is better)
Translates to: RSVAEALGDSGGHLL*NLVWTVKEIGYHIP
Trigger: TGGAATGTGGTAGCCTATTTCTTTGACAGTCCAAACCAGGTTGCAGAGAAGGTGGCCTCCAGAATCGCCGAGGGCTTCAGCGACACTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600807.1
CDS CCA 90 bp TGTGGGTCTCTGCACCGCCATCTGTTCTCATGGTGCTCGTACACGTaGATCGTAGGCGCTACGCAGTCCATCGTAAACTTGGTGTTGTCT +
Preference number: 5 (lower is better)
Translates to: CGSLHRHLFSWCSYT*IVGATQSIVNLVLS
Trigger: AGACAACACCAAGTTTACGATGGACTGCGTAGCGCCTACGATCCACGTGTACGAGCACCATGAGAACAGATGGCGGTGCAGAGACCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253457.8
ENST00000595980.5
ENST00000597291.1
ENST00000600807.1
CDS-3UTR CAA 90 bp TTGCGGTGGCTCTGTGAGCCGACACCATGTGGAGCAGTGCTGTTCACAGCCCAGATCGTAAACTTGGTGTaGTCTACCATGATGAGCGCA +
Preference number: 5 (lower is better)
Translates to: LRWLCEPTPCGAVLFTAQIVNLV*STMMSA
Trigger: TGCGCTCATCATGGTAGACAACACCAAGTTTACGAT...CTGGGCTGTGAACAGCACTGCTCCACATGGTGTCGGCTCACAGAGCCACCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253457.8
CDS-3UTR CAA 90 bp CAGGCGGAGGTTGCAGTGAACCGAGACTGCGGCATTGTGCTCCAATCGGGTGACATCGTAAACTTGGTGTaGTCTACCATGATGAGCGCA +
Preference number: 5 (lower is better)
Translates to: QAEVAVNRDCGIVLQSGDIVNLV*STMMSA
Trigger: TGCGCTCATCATGGTAGACAACACCAAGTTTACGAT...GTCACCCGATTGGAGCACAATGCCGCAGTCTCGGTTCACTGCAACCTCCGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS-3UTR CAA 90 bp ATCACAAACCCTTTCAGGTCACACCGATCGTTACAAATTCCTCCATGGAGTCAATCCCGCTGGGCAGAGTaGCGGTGGCTCTGTGAGCCG +
Preference number: 5 (lower is better)
Translates to: ITNPFRSHRSLQIPPWSQSRWAE*RWLCEP
Trigger: CGGCTCACAGAGCCACCGCAACTCTGCCCAGCGGGA...TTGACTCCATGGAGGAATTTGTAACGATCGGTGTGACCTGAAAGGGTTTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS CCA 90 bp TGTGTAGTGATGCGGAAGCACAGAAGCCATGGCCTGGGATTCAACTaGTCTGCAGCTGAGAGAAAACTGCAAGAGGCGGCAATGGTCTCA +
Preference number: 5 (lower is better)
Translates to: CVVMRKHRSHGLGFN*SAAERKLQEAAMVS
Trigger: TGAGACCATTGCCGCCTCTTGCAGTTTTCTCTCAGCTGCAGACCAGTTGAATCCCAGGCCATGGCTTCTGTGCTTCCGCATCACTACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS CCA 90 bp AGAGACTCTTCCGACAGAGCCTGTATGCAGAGTGGCGCGAGTGTCTaGCCTGAGGAAAACTGTTGTGTCATGCAGGAAAACGTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: RDSSDRACMQSGASV*PEENCCVMQENVKS
Trigger: GGACTTGACGTTTTCCTGCATGACACAACAGTTTTCCTCAGGCCAGACACTCGCGCCACTCTGCATACAGGCTCTGTCGGAAGAGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS-3UTR CAA 90 bp CTGAGAGAGTCCACAGGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTCTGCAACCTGGTTaGGACTGGCATCCTTTACTC +
Preference number: 5 (lower is better)
Translates to: LRESTGTVRRDVCTSSRDSLQPG*DWHPLL
Trigger: GAGTAAAGGATGCCAGTCCAAACCAGGTTGCAGAGA...GTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCCTGTGGACTCTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS TCA 90 bp CTGAGAGAAAACTGCAAGAGGCGGCAATGGTCTCAAGCAGATAAATaGGTGAAGGGGTTAGCGGAAAGGAAACCGCCGCAGAGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: LRENCKRRQWSQADK*VKGLAERKPPQSKL
Trigger: GAGCTTGCTCTGCGGCGGTTTCCTTTCCGCTAACCCCTTCACTCATTTATCTGCTTGAGACCATTGCCGCCTCTTGCAGTTTTCTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS TCA 90 bp GCGGAAGCACAGAAGCCATGGCCTGGGATTCAACTGGTCTGCAGCTaGGAGAAAACTGCAAGAGGCGGCAATGGTCTCAAGCAGATAAAT +
Preference number: 5 (lower is better)
Translates to: AEAQKPWPGIQLVCS*EKTARGGNGLKQIN
Trigger: ATTTATCTGCTTGAGACCATTGCCGCCTCTTGCAGTTTTCTCTCAGCTGCAGACCAGTTGAATCCCAGGCCATGGCTTCTGTGCTTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS-3UTR CAA 90 bp GACAGTGCGAGACTCCGTCTGAGAGTTGGCAGGGGCAACGCTAGCAATTCCTACCAGTCCATCGTAAACTaGGTGTTGTCTACCATGATG +
Preference number: 5 (lower is better)
Translates to: DSARLRLRVGRGNASNSYQSIVN*VLSTMM
Trigger: CATCATGGTAGACAACACCAAGTTTACGATGGACTG...GTAGGAATTGCTAGCGTTGCCCCTGCCAACTCTCAGACGGAGTCTCGCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS TCA 90 bp ATCGTAGGCGCTACGCAGTCCATCGTAAACTTGGTGTTGTCTACCTaGGCACAAGGCAAAGGACACGAGAGTGAACAGAATGCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: IVGATQSIVNLVLST*AQGKGHESEQNASQ
Trigger: TTGGCTGGCATTCTGTTCACTCTCGTGTCCTTTGCCTTGTGCTCAGGTAGACAACACCAAGTTTACGATGGACTGCGTAGCGCCTACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS TCA 90 bp GGACGCCTTTCACGTGGAATTCTGAGAAAGTTGGAGGCAGATGACTaGAGCTTTCTGAGTGGCCACAGATACATCAAAGCACAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GRLSRGILRKLEADD*SFLSGHRYIKAQAW
Trigger: CCAGGCCTGTGCTTTGATGTATCTGTGGCCACTCAGAAAGCTTCAGTCATCTGCCTCCAACTTTCTCAGAATTCCACGTGAAAGGCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS GCA 90 bp ATTCTGTCTGAATCAAGGCTGTTCAGCAAGGCCCTTGATGTCATCTaGTCACATACAAGGACCTTCCTTCCCTGTGCCCCTAGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: ILSESRLFSKALDVI*SHTRTFLPCAPRGC
Trigger: ACAGCCTCTAGGGGCACAGGGAAGGAAGGTCCTTGTATGTGAGCAGATGACATCAAGGGCCTTGCTGAACAGCCTTGATTCAGACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS-3UTR CAA 90 bp AGAAACGATCATTTCCCTTTCCTGGCCCTGCAGGCACGTGAGCTTTCTGCGTGGTGTAGGACAGCTTTATaGATCTCTGGGTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: RNDHFPFLALQARELSAWCRTAL*ISGFVQ
Trigger: CTGGACAAACCCAGAGATCAATAAAGCTGTCCTACA...CCACGCAGAAAGCTCACGTGCCTGCAGGGCCAGGAAAGGGAAATGATCGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS TCA 90 bp GAAGGGACGCCTTTCACGTGGAATTCTGAGAAAGTTGGAGGCAGATaGCTGAAGCTTTCTGAGTGGCCACAGATACATCAAAGCACAGGC +
Preference number: 5 (lower is better)
Translates to: EGTPFTWNSEKVGGR*LKLSEWPQIHQSTG
Trigger: GCCTGTGCTTTGATGTATCTGTGGCCACTCAGAAAGCTTCAGTCATCTGCCTCCAACTTTCTCAGAATTCCACGTGAAAGGCGTCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS CCA 90 bp GAAGCCCTCGGCGATTCTGGAGGCCACCTTCTCTGCAACCTGGTTTaGACTGTCAAAGAAATAGGCTACCACATTCCAGTTAATGCCATT +
Preference number: 5 (lower is better)
Translates to: EALGDSGGHLLCNLV*TVKEIGYHIPVNAI
Trigger: AATGGCATTAACTGGAATGTGGTAGCCTATTTCTTTGACAGTCCAAACCAGGTTGCAGAGAAGGTGGCCTCCAGAATCGCCGAGGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600807.1
CDS-3UTR CAA 90 bp CTCCGTCTGAGAGTTGGCAGGGGCAACGCTAGCAATTCCTACCAGGCATTTGATTGTAGGACAGCTTTATaGATCTCTGGGTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: LRLRVGRGNASNSYQAFDCRTAL*ISGFVQ
Trigger: CTGGACAAACCCAGAGATCAATAAAGCTGTCCTACA...ATCAAATGCCTGGTAGGAATTGCTAGCGTTGCCCCTGCCAACTCTCAGACGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595980.5
CDS TCA 90 bp TGTTTACAAAAGGCACAGTCAACACCACTGAGACTTAACAAGCAATaGCAGAAAGACTGGCAGAGCCAACAGGCTGCACGTGCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: CLQKAQSTPLRLNKQ*QKDWQSQQAARARF
Trigger: GAAGCGAGCACGTGCAGCCTGTTGGCTCTGCCAGTCTTTCTGTCATTGCTTGTTAAGTCTCAGTGGTGTTGACTGTGCCTTTTGTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600807.1
CDS CCA 90 bp GCGGCTTGTAACAGCATCAAGAGAGAAGGCCAGCCACATGCACAGTaGTATGAACAGAGATGGTGCAGAGTACTGAGAAACATGTGCATT +
Preference number: 5 (lower is better)
Translates to: AACNSIKREGQPHAQ*YEQRWCRVLRNMCI
Trigger: AATGCACATGTTTCTCAGTACTCTGCACCATCTCTGTTCATACCACTGTGCATGTGGCTGGCCTTCTCTCTTGATGCTGTTACAAGCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS-3UTR CAA 90 bp GGGACAGTCAGACGGGATGTCTGCACCTCTTCTAGAGACTCTGTGTTAAAAACATCTCTGCAACCTGGTTaGGACTGGCATCCTTTACTC +
Preference number: 5 (lower is better)
Translates to: GTVRRDVCTSSRDSVLKTSLQPG*DWHPLL
Trigger: GAGTAAAGGATGCCAGTCCAAACCAGGTTGCAGAGA...TGTTTTTAACACAGAGTCTCTAGAAGAGGTGCAGACATCCCGTCTGACTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CAA 90 bp CTTTTGCCCCTAACGATAAAGGCTTCTGTGGCATCAGTGGTGTCACTCCCGCTGTACTCGCTCATTAGCTaGATAATAACCAGCAATCAC +
Preference number: 5 (lower is better)
Translates to: LLPLTIKASVASVVSLPLYSLIS*IITSNH
Trigger: GTGATTGCTGGTTATTATCAAGCTAATGAGCGAGTA...CAGCGGGAGTGACACCACTGATGCCACAGAAGCCTTTATCGTTAGGGGCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CAA 90 bp CTACCAGAGATGTCTGCTTTTGCCCCTAACGATAAAGGCTTCTGTGGCATCAGTCAGAGATGTCTGCTTTaGCCCCTAACGATAAAGGCT +
Preference number: 5 (lower is better)
Translates to: LPEMSAFAPNDKGFCGISQRCLL*PLTIKA
Trigger: AGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTG...ACTGATGCCACAGAAGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CAA 90 bp ACTGAACATTCTGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTCAGAGATGTCTGCTTTaGCCCCTAACGATAAAGGCT +
Preference number: 5 (lower is better)
Translates to: TEHSAPFQGTCHFLKRSAQRCLL*PLTIKA
Trigger: AGCCTTTATCGTTAGGGGCAAAAGCAGACATCTCTG...AGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCAGAATGTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS TCA 90 bp GCCAGCCACATGCACAGTGGTATGAACAGAGATGGTGCAGAGTACTaGGAAACATGTGCATTTCAAACGCATGAAGAGGTATACAGAGCA +
Preference number: 5 (lower is better)
Translates to: ASHMHSGMNRDGAEY*ETCAFQTHEEVYRA
Trigger: TGCTCTGTATACCTCTTCATGCGTTTGAAATGCACATGTTTCTCAGTACTCTGCACCATCTCTGTTCATACCACTGTGCATGTGGCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS-3UTR CAA 90 bp TGCCCCCTTTCAAGGCACATGCCACTTCTTAAAACGGTCAGCTTTCCACACAGGTTAATAGGAACAATCTaGCACAAGCAGAAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: CPLSRHMPLLKTVSFPHRLIGTI*HKQKEL
Trigger: AAGCTCTTTCTGCTTGTGCAAGATTGTTCCTATTAA...CCTGTGTGGAAAGCTGACCGTTTTAAGAAGTGGCATGTGCCTTGAAAGGGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CAA 90 bp ATCACAAACCCTTTCAGGTCACACCGATCGTTACAAATTCCTCCATGGAGTCAACAGTCCATCGTAAACTaGGTGTTGTCTACCATGATG +
Preference number: 5 (lower is better)
Translates to: ITNPFRSHRSLQIPPWSQQSIVN*VLSTMM
Trigger: CATCATGGTAGACAACACCAAGTTTACGATGGACTG...TTGACTCCATGGAGGAATTTGTAACGATCGGTGTGACCTGAAAGGGTTTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253457.8
CDS-3UTR CAA 90 bp TACCCTGATCCCAGGACGCCTGGACGACATCAAAATTCAAACAGGATAAAAACTTGTAGGACAGCTTTATaGATCTCTGGGTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: YPDPRTPGRHQNSNRIKTCRTAL*ISGFVQ
Trigger: CTGGACAAACCCAGAGATCAATAAAGCTGTCCTACA...AGTTTTTATCCTGTTTGAATTTTGATGTCGTCCAGGCGTCCTGGGATCAGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS-3UTR CAA 90 bp AAAATAGGTTTTCTTCTTCAACGTAGTGGAAAGGCCCGGAGCCCAGTCACAGCGTTAATAGGAACAATCTaGCACAAGCAGAAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: KIGFLLQRSGKARSPVTALIGTI*HKQKEL
Trigger: AAGCTCTTTCTGCTTGTGCAAGATTGTTCCTATTAA...CGCTGTGACTGGGCTCCGGGCCTTTCCACTACGTTGAAGAAGAAAACCTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS TCA 90 bp CAGAGATGGTGCAGAGTACTGAGAAACATGTGCATTTCAAACGCATaGAGAGGTATACAGAGCATAGAAGACATGGTTAATACATGGAAG +
Preference number: 5 (lower is better)
Translates to: QRWCRVLRNMCISNA*RGIQSIEDMVNTWK
Trigger: CTTCCATGTATTAACCATGTCTTCTATGCTCTGTATACCTCTTCATGCGTTTGAAATGCACATGTTTCTCAGTACTCTGCACCATCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS-3UTR CAA 90 bp TGCACAAGCAGAAAGAGCTTTGATTTGGAGGATTATAGCAACATACAACTGAGACAAGCAGAAAGAGCTTaGATTTGGAGGATTATAGCA +
Preference number: 5 (lower is better)
Translates to: CTSRKSFDLEDYSNIQLRQAERA*IWRIIA
Trigger: TGCTATAATCCTCCAAATCAAAGCTCTTTCTGCTTG...TCTCAGTTGTATGTTGCTATAATCCTCCAAATCAAAGCTCTTTCTGCTTGTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS CCA 72 bp GACGAGGCGGCGGCGATTGATGGCGCGGCCGCGGGCTaGCGGGGGACCCTTCAGGCCCGGCCCCGTTTGGGC +
Preference number: 6 (lower is better)
Translates to: DEAAAIDGAAAG*RGTLQARPRLG
Trigger: GCCCAAACGGGGCCGGGCCTGAAGGGTCCCCCGCCAGCCCGCGGCCGCGCCATCAATCGCCGCCGCCTCGTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS TCA 72 bp AGGCGGGGTGAGAGTGGCTCTCACGTGGCCGGGCGCTaGAGGAGCCCAGCCCGCGCGGCAGCATGGGGCGCA +
Preference number: 6 (lower is better)
Translates to: RRGESGSHVAGR*RSPARAAAWGA
Trigger: TGCGCCCCATGCTGCCGCGCGGGCTGGGCTCCTTCAGCGCCCGGCCACGTGAGAGCCACTCTCACCCCGCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS GCA 72 bp AGGGTGTGGTGGGCGCCGGGGCCGCCCAGGGGGAGGTaGTCCTTACGCGGCTTCTGCTTCTCGGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: RVWWAPGPPRGR*SLRGFCFSATR
Trigger: CCTGGTGGCCGAGAAGCAGAAGCCGCGTAAGGAGCACCTCCCCCTGGGCGGCCCCGGCGCCCACCACACCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000435200.2
ENST00000596852.1
CDS GCA 72 bp GGGCCGCCCAGGGGGAGGTGCTCCTTACGCGGCTTCTaGTTCTCGGCCACCAGGAGCCCGTTGACGGCGCAG +
Preference number: 6 (lower is better)
Translates to: GPPRGRCSLRGF*FSATRSPLTAQ
Trigger: CTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAAGCAGAAGCCGCGTAAGGAGCACCTCCCCCTGGGCGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000435200.2
ENST00000596852.1
CDS CCA 72 bp ACCCTTCAGGCCCGGCCCCGTTTGGGCCTCGGCTCCTaGAAAAGCGACTCGCGCCTCTGGGAAGCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: TLQARPRLGLGS*KSDSRLWEAAA
Trigger: GGCTGCGGCTTCCCAGAGGCGCGAGTCGCTTTTCCAGGAGCCGAGGCCCAAACGGGGCCGGGCCTGAAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS TCA 72 bp TACGCGGCTTCTGCTTCTCGGCCACCAGGAGCCCGTTaGCGGCGCAGTGCGGGTACTTGGCGCCGTGCAGCA +
Preference number: 6 (lower is better)
Translates to: YAASASRPPGAR*RRSAGTWRRAA
Trigger: TGCTGCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAAGCAGAAGCCGCGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000435200.2
ENST00000596852.1
CDS CCA 72 bp GAGCCCAGCCCGCGCGGCAGCATGGGGCGCACTCACTaGTGTGGGTCTCTGCACCGCCATCTGTTCTCATGG +
Preference number: 6 (lower is better)
Translates to: EPSPRGSMGRTH*CGSLHRHLFSW
Trigger: CCATGAGAACAGATGGCGGTGCAGAGACCCACACCAGTGAGTGCGCCCCATGCTGCCGCGCGGGCTGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS CAA 72 bp TTACGCGGCTTCTGCTTCTCGGCCACCAGGAGCCCGTaGACGGCGCAGTGCGGGTACTTGGCGCCGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LRGFCFSATRSP*TAQCGYLAPCS
Trigger: GCTGCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAAGCAGAAGCCGCGTAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000435200.2
ENST00000596852.1
CDS GCA 72 bp TGCTTCTCGGCCACCAGGAGCCCGTTGACGGCGCAGTaGGGGTACTTGGCGCCGTGCAGCACCATCTTGCAG +
Preference number: 6 (lower is better)
Translates to: CFSATRSPLTAQ*GYLAPCSTILQ
Trigger: CTGCAAGATGGTGCTGCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000435200.2
ENST00000596852.1
CDS CAA 90 bp AGGTGCTCCTTACGCGGCTTCTGCTTCTCGGCCACCAGGAGCCCGTaGACGGCGCAGTGCGGGTACTTGGCGCCGTGCAGCACCATCTTG +
Preference number: 6 (lower is better)
Translates to: RCSLRGFCFSATRSP*TAQCGYLAPCSTIL
Trigger: CAAGATGGTGCTGCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAAGCAGAAGCCGCGTAAGGAGCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000435200.2
ENST00000596852.1
CDS GCA 72 bp CGCAGTGCGGGTACTTGGCGCCGTGCAGCACCATCTTaGAGTAGGCCTGGGTGGTCAGTTTCACCCCGGGCA +
Preference number: 6 (lower is better)
Translates to: RSAGTWRRAAPS*SRPGWSVSPRA
Trigger: TGCCCGGGGTGAAACTGACCACCCAGGCCTACTGCAAGATGGTGCTGCACGGCGCCAAGTACCCGCACTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000435200.2
ENST00000596852.1
CDS GCA 72 bp GCGGCAGCATGGGGCGCACTCACTGGTGTGGGTCTCTaGACCGCCATCTGTTCTCATGGTGCTCGTACACGT +
Preference number: 6 (lower is better)
Translates to: AAAWGALTGVGL*TAICSHGARTR
Trigger: ACGTGTACGAGCACCATGAGAACAGATGGCGGTGCAGAGACCCACACCAGTGAGTGCGCCCCATGCTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS CCA 72 bp GGTACCACTGAGGTTCCCTCTACTGCCTGGAAGCGCTaGAACACTGGGGCCTACAGGAGCCGGGGAATATGC +
Preference number: 6 (lower is better)
Translates to: GTTEVPSTAWKR*NTGAYRSRGIC
Trigger: GCATATTCCCCGGCTCCTGTAGGCCCCAGTGTTCCAGCGCTTCCAGGCAGTAGAGGGAACCTCAGTGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS GCA 72 bp TGGTGTGGGTCTCTGCACCGCCATCTGTTCTCATGGTaGTCGTACACGTGGATCGTAGGCGCTACGCAGTCC +
Preference number: 6 (lower is better)
Translates to: WCGSLHRHLFSW*SYTWIVGATQS
Trigger: GGACTGCGTAGCGCCTACGATCCACGTGTACGAGCACCATGAGAACAGATGGCGGTGCAGAGACCCACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253457.8
ENST00000595980.5
ENST00000597291.1
ENST00000600807.1
CDS CCA 72 bp CACTGGTGTGGGTCTCTGCACCGCCATCTGTTCTCATaGTGCTCGTACACGTGGATCGTAGGCGCTACGCAG +
Preference number: 6 (lower is better)
Translates to: HWCGSLHRHLFS*CSYTWIVGATQ
Trigger: CTGCGTAGCGCCTACGATCCACGTGTACGAGCACCATGAGAACAGATGGCGGTGCAGAGACCCACACCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS CAA 90 bp AACAAGTTCCCAGGTGCTGCGGCTGGCAGGGGACCCCACTCCCACTaGTGTAGTGATGCGGAAGCACAGAAGCCATGGCCTGGGATTCAA +
Preference number: 6 (lower is better)
Translates to: NKFPGAAAGRGPHSH*CSDAEAQKPWPGIQ
Trigger: TTGAATCCCAGGCCATGGCTTCTGTGCTTCCGCATCACTACACAAGTGGGAGTGGGGTCCCCTGCCAGCCGCAGCACCTGGGAACTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS GCA 72 bp GCTGAAGCCCTCGGCGATTCTGGAGGCCACCTTCTCTaGAACCTGGTTTGGACTGGCATCCTTTACTCGCTC +
Preference number: 6 (lower is better)
Translates to: AEALGDSGGHLL*NLVWTGILYSL
Trigger: GAGCGAGTAAAGGATGCCAGTCCAAACCAGGTTGCAGAGAAGGTGGCCTCCAGAATCGCCGAGGGCTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS CCA 72 bp TCATGGTGTGGGTCTCTGCACCGCCATCTGTTCTCATaGTGCTCGTACACGTGGATCGTAGGCGCTACGCAG +
Preference number: 6 (lower is better)
Translates to: SWCGSLHRHLFS*CSYTWIVGATQ
Trigger: CTGCGTAGCGCCTACGATCCACGTGTACGAGCACCATGAGAACAGATGGCGGTGCAGAGACCCACACCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000595980.5
ENST00000600807.1
CDS CCA 72 bp TTTCTGAGTGGCCACAGATACATCAAAGCACAGGCCTaGGAAGAGTGTCTGTGCTCTAGCGCCTGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: FLSGHRYIKAQA*EECLCSSAWGG
Trigger: CCCACCCCAGGCGCTAGAGCACAGACACTCTTCCCAGGCCTGTGCTTTGATGTATCTGTGGCCACTCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS GCA 72 bp CTGGCCAGTCTTCACAGTAGTCATGGTGTGGGTCTCTaGACCGCCATCTGTTCTCATGGTGCTCGTACACGT +
Preference number: 6 (lower is better)
Translates to: LASLHSSHGVGL*TAICSHGARTR
Trigger: ACGTGTACGAGCACCATGAGAACAGATGGCGGTGCAGAGACCCACACCATGACTACTGTGAAGACTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253457.8
ENST00000595980.5
ENST00000600807.1
CDS GCA 72 bp CCAACACGTGCTCACTTCCTCGCCCACAGAGGGTTCTaGATCCACGTACCTGGCATCCTTTACTCGCTCATT +
Preference number: 6 (lower is better)
Translates to: PTRAHFLAHRGF*IHVPGILYSLI
Trigger: AATGAGCGAGTAAAGGATGCCAGGTACGTGGATGCAGAACCCTCTGTGGGCGAGGAAGTGAGCACGTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596852.1
CDS CCA 72 bp CTGCACCGCCATCTGTTCTCATGGTGCTCGTACACGTaGATCGTAGGCGCTACGCAGTCCATCGTAAACTTG +
Preference number: 6 (lower is better)
Translates to: LHRHLFSWCSYT*IVGATQSIVNL
Trigger: CAAGTTTACGATGGACTGCGTAGCGCCTACGATCCACGTGTACGAGCACCATGAGAACAGATGGCGGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253457.8
ENST00000595980.5
ENST00000597291.1
ENST00000600807.1
CDS CCA 72 bp ATGCGGAAGCACAGAAGCCATGGCCTGGGATTCAACTaGTCTGCAGCTGAGAGAAAACTGCAAGAGGCGGCA +
Preference number: 6 (lower is better)
Translates to: MRKHRSHGLGFN*SAAERKLQEAA
Trigger: TGCCGCCTCTTGCAGTTTTCTCTCAGCTGCAGACCAGTTGAATCCCAGGCCATGGCTTCTGTGCTTCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS TCA 72 bp CAGAAGCCATGGCCTGGGATTCAACTGGTCTGCAGCTaGGAGAAAACTGCAAGAGGCGGCAATGGTCTCAAG +
Preference number: 6 (lower is better)
Translates to: QKPWPGIQLVCS*EKTARGGNGLK
Trigger: CTTGAGACCATTGCCGCCTCTTGCAGTTTTCTCTCAGCTGCAGACCAGTTGAATCCCAGGCCATGGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS GCA 72 bp GCTGAAGCCCTCGGCGATTCTGGAGGCCACCTTCTCTaGAACCTGGTTTGGACTGTCAAAGAAATAGGCTAC +
Preference number: 6 (lower is better)
Translates to: AEALGDSGGHLL*NLVWTVKEIGY
Trigger: GTAGCCTATTTCTTTGACAGTCCAAACCAGGTTGCAGAGAAGGTGGCCTCCAGAATCGCCGAGGGCTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600807.1
CDS CCA 72 bp CGCATTTCTGATTCAGTGGGGTCTGGGGTGGGTGCCTaGGAATTCGCATTTCTAACAAGTTCCCAGGTGCTG +
Preference number: 6 (lower is better)
Translates to: RISDSVGSGVGA*EFAFLTSSQVL
Trigger: CAGCACCTGGGAACTTGTTAGAAATGCGAATTCCCAGGCACCCACCCCAGACCCCACTGAATCAGAAATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS CCA 72 bp TCCGACAGAGCCTGTATGCAGAGTGGCGCGAGTGTCTaGCCTGAGGAAAACTGTTGTGTCATGCAGGAAAAC +
Preference number: 6 (lower is better)
Translates to: SDRACMQSGASV*PEENCCVMQEN
Trigger: GTTTTCCTGCATGACACAACAGTTTTCCTCAGGCCAGACACTCGCGCCACTCTGCATACAGGCTCTGTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS TCA 72 bp AACTGCAAGAGGCGGCAATGGTCTCAAGCAGATAAATaGGTGAAGGGGTTAGCGGAAAGGAAACCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: NCKRRQWSQADK*VKGLAERKPPQ
Trigger: CTGCGGCGGTTTCCTTTCCGCTAACCCCTTCACTCATTTATCTGCTTGAGACCATTGCCGCCTCTTGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS CAA 90 bp CTCATCCTAGGATTCTGTCTGAATCAAGGCTGTTCAGCAAGGCCCTaGATGTCATCTGCTCACATACAAGGACCTTCCTTCCCTGTGCCC +
Preference number: 6 (lower is better)
Translates to: LILGFCLNQGCSARP*MSSAHIQGPSFPVP
Trigger: GGGCACAGGGAAGGAAGGTCCTTGTATGTGAGCAGATGACATCAAGGGCCTTGCTGAACAGCCTTGATTCAGACAGAATCCTAGGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS TCA 72 bp TATGCTTGGTATCATGCTTCTGGAGAAAACGCTAACTaGAAACACAGGCGGGGTGAGAGTGGCTCTCACGTG +
Preference number: 6 (lower is better)
Translates to: YAWYHASGENAN*KHRRGESGSHV
Trigger: CACGTGAGAGCCACTCTCACCCCGCCTGTGTTTTCAGTTAGCGTTTTCTCCAGAAGCATGATACCAAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS TCA 72 bp TGGCCAGTCTTCACAGTAGTCACTACGGGTCAAACATaGAGAAGTCAGCATCTAACAGTGAAAACGGGCGGC +
Preference number: 6 (lower is better)
Translates to: WPVFTVVTTGQT*RSQHLTVKTGG
Trigger: GCCGCCCGTTTTCACTGTTAGATGCTGACTTCTTCATGTTTGACCCGTAGTGACTACTGTGAAGACTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS TCA 72 bp GCTACGCAGTCCATCGTAAACTTGGTGTTGTCTACCTaGGCACAAGGCAAAGGACACGAGAGTGAACAGAAT +
Preference number: 6 (lower is better)
Translates to: ATQSIVNLVLST*AQGKGHESEQN
Trigger: ATTCTGTTCACTCTCGTGTCCTTTGCCTTGTGCTCAGGTAGACAACACCAAGTTTACGATGGACTGCGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS CAA 72 bp GGATTCTGTCTGAATCAAGGCTGTTCAGCAAGGCCCTaGATGTCATCTGCTCACATACAAGGACCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: GFCLNQGCSARP*MSSAHIQGPSF
Trigger: GAAGGAAGGTCCTTGTATGTGAGCAGATGACATCAAGGGCCTTGCTGAACAGCCTTGATTCAGACAGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS TCA 72 bp TCACGTGGAATTCTGAGAAAGTTGGAGGCAGATGACTaGAGCTTTCTGAGTGGCCACAGATACATCAAAGCA +
Preference number: 6 (lower is better)
Translates to: SRGILRKLEADD*SFLSGHRYIKA
Trigger: TGCTTTGATGTATCTGTGGCCACTCAGAAAGCTTCAGTCATCTGCCTCCAACTTTCTCAGAATTCCACGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS CCA 72 bp TGTTCAGACCAGAATCATCTAGAAGGTGTCTTAACATaGACTGCTGGGCTAAACCCCCGCATTTCTGATTCA +
Preference number: 6 (lower is better)
Translates to: CSDQNHLEGVLT*TAGLNPRISDS
Trigger: TGAATCAGAAATGCGGGGGTTTAGCCCAGCAGTCCATGTTAAGACACCTTCTAGATGATTCTGGTCTGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597291.1
CDS GCA 72 bp ATGACAGAAAGACTGGCAGAGCCAACAGGCTGCACGTaGTCGCTTCGCTGGTTTACTTATTATTTAATTTTT +
Preference number: 6 (lower is better)
Translates to: MTERLAEPTGCT*SLRWFTYYLIF
Trigger: AAAAATTAAATAATAAGTAAACCAGCGAAGCGAGCACGTGCAGCCTGTTGGCTCTGCCAGTCTTTCTGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600807.1
CDS TCA 72 bp TTCAACACTGTTTACAAAAGGCACAGTCAACACCACTaGGACTTAACAAGCAATGACAGAAAGACTGGCAGA +
Preference number: 6 (lower is better)
Translates to: FNTVYKRHSQHH*DLTSNDRKTGR
Trigger: TCTGCCAGTCTTTCTGTCATTGCTTGTTAAGTCTCAGTGGTGTTGACTGTGCCTTTTGTAAACAGTGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600807.1
CDS CAA 72 bp CTGGTTTGGACTGGCATCCTTTACTCGCTCATTAGCTaGATAATAACCAGCAATCACGTAGCTATGATCTTT +
Preference number: 6 (lower is better)
Translates to: LVWTGILYSLIS*IITSNHVAMIF
Trigger: AAAGATCATAGCTACGTGATTGCTGGTTATTATCAAGCTAATGAGCGAGTAAAGGATGCCAGTCCAAACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253457.8
ENST00000435200.2
CDS CAA 72 bp ATCCACGTACCTGGCATCCTTTACTCGCTCATTAGCTaGATAATAACCAGCAATCACGTAGCTATGATCTTT +
Preference number: 6 (lower is better)
Translates to: IHVPGILYSLIS*IITSNHVAMIF
Trigger: AAAGATCATAGCTACGTGATTGCTGGTTATTATCAAGCTAATGAGCGAGTAAAGGATGCCAGGTACGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596852.1