Pregenerated sensors for EMC7 (Homo sapiens)
Ensembl gene IDs: ENSG00000134153Ensembl transcript IDs: ENST00000256545.9, ENST00000527822.5, ENST00000528949.1, ENST00000532113.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATaGCACCCAGTGTTGCCGTGTTTGTGCAAATGCCAGCTCTGGACG | + |
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Preference number: 1 (lower is better) Translates to: LKFIVVASHGFPRLG*HPVLPCLCKCQLWT Trigger: CGTCCAGAGCTGGCATTTGCACAAACACGGCAACACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| 3UTR GCA 72 bp | CACACGGTTTTCCAAGACTTGGATGCCACCCAGTGTTaGCGTGTTTGTGCAAATGCCAGCTCTGGACGGCCT | + |
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Preference number: 3 (lower is better) Translates to: HTVFQDLDATQC*RVCANASSGRP Trigger: AGGCCGTCCAGAGCTGGCATTTGCACAAACACGGCAACACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| 3UTR GCA 72 bp | ATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATaGCACCCAGTGTTGCCGTGTTTGTGCAAATGCCAG | + |
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Preference number: 3 (lower is better) Translates to: IVVASHGFPRLG*HPVLPCLCKCQ Trigger: CTGGCATTTGCACAAACACGGCAACACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| 3UTR GCA 72 bp | GAGATCAACGTCGGGATGACTCAAGTTTATAGTAGTTaGTTCACACGGTTTTCCAAGACTTGGATGCCACCC | + |
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Preference number: 3 (lower is better) Translates to: EINVGMTQVYSS*FTRFSKTWMPP Trigger: GGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGACGTTGATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| 3UTR CCA 72 bp | GTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTaGATGCCACCCAGTGTTGCCGTGTTTGTGCAAATG | + |
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Preference number: 3 (lower is better) Translates to: VYSSCFTRFSKT*MPPSVAVFVQM Trigger: CATTTGCACAAACACGGCAACACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| 3UTR TCA 72 bp | GTTAACATACACAGTTGTAAGAGATCAACGTCGGGATaGCTCAAGTTTATAGTAGTTGCTTCACACGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: VNIHSCKRSTSG*LKFIVVASHGF Trigger: AAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGACGTTGATCTCTTACAACTGTGTATGTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| 3UTR CAA 72 bp | TCACACGGTTTTCCAAGACTTGGATGCCACCCAGTGTaGCCGTGTTTGTGCAAATGCCAGCTCTGGACGGCC | + |
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Preference number: 4 (lower is better) Translates to: SHGFPRLGCHPV*PCLCKCQLWTA Trigger: GGCCGTCCAGAGCTGGCATTTGCACAAACACGGCAACACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CCA 90 bp | ACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCGGCACCTCCGAGCTCTaGACATCCCCCGATAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TQVYSSCFTRFSKTWMPPGTSEL*TSPDSS Trigger: GCTGCTATCGGGGGATGTCCAGAGCTCGGAGGTGCC...GGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR TCA 90 bp | ATCAACGTCGGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACAGAGCGGCCGCCATaGCAGCAGCTCTGCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: INVGMTQVYSSCFTRFSKTERPP*QQLCTQ Trigger: CTGAGTGCAGAGCTGCTGTCATGGCGGCCGCTCTGT...CTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGACGTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR TCA 90 bp | GAGATCAACGTCGGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCCAGCTCTGGACGGCCTaGCTACCTCCTTTTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EINVGMTQVYSSCFTRFSQLWTA*LPPFAS Trigger: GCTGGCAAAAGGAGGTAGTCAGGCCGTCCAGAGCTG...GGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGACGTTGATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR GCA 90 bp | TCACACGGTTTTCCAAGACTTGGATGCCACCCAGTGTTGCCGTGTTTGTGCAAAGTGTTGCCGTGTTTGTaGAAATGCCAGCTCTGGACG | + |
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Preference number: 4 (lower is better) Translates to: SHGFPRLGCHPVLPCLCKVLPCL*KCQLWT Trigger: CGTCCAGAGCTGGCATTTGCACAAACACGGCAACAC...TTTGCACAAACACGGCAACACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CCA 90 bp | ACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCCTGAGGCTTCACCCCTaGAACAACTGCACGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TQVYSSCFTRFSKTWMPPLRLHP*NNCTPL Trigger: GAGGGGCGTGCAGTTGTTCCAGGGGTGAAGCCTCAG...GGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CCA 90 bp | CACACGGTTTTCCAAGACTTGGATGCCACCCAGTGTTGCCGTGTTTGTGCAAATCGGTTTTCCAAGACTTaGATGCCACCCAGTGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: HTVFQDLDATQCCRVCANRFSKT*MPPSVA Trigger: GGCAACACTGGGTGGCATCCAAGTCTTGGAAAACCG...ATTTGCACAAACACGGCAACACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR TCA 90 bp | GGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGGCCGAGATCCAGTCCTaGGGCTTCACCCCTGGAACA | + |
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Preference number: 4 (lower is better) Translates to: GMTQVYSSCFTRFSKTWMAEIQS*GFTPGT Trigger: TGTTCCAGGGGTGAAGCCTCAGGACTGGATCTCGGC...CATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR TCA 90 bp | GTCGGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGCACGCCCCTCAATCTTaGAGCGATCTCCTATGCCGA | + |
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Preference number: 4 (lower is better) Translates to: VGMTQVYSSCFTRFSKTWHAPQS*SDLLCR Trigger: TCGGCATAGGAGATCGCTTCAAGATTGAGGGGCGTG...CCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR GCA 90 bp | GAGATCAACGTCGGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCCACCCCTGGAACAACTaGACGCCCCTCAATCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: EINVGMTQVYSSCFTRFSHPWNN*TPLNLE Trigger: TTCAAGATTGAGGGGCGTGCAGTTGTTCCAGGGGTG...GGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGACGTTGATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR GCA 90 bp | ACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCGATGCCACCCAGTGTTaGCGTGTTTGTGCAAATGCC | + |
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Preference number: 4 (lower is better) Translates to: TQVYSSCFTRFSKTWMPPDATQC*RVCANA Trigger: GGCATTTGCACAAACACGGCAACACTGGGTGGCATC...GGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR TCA 90 bp | TATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCAGTGTTGCCTTTTTCCTTTCGAAGTaGTATCCACTCGAACGGGAT | + |
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Preference number: 4 (lower is better) Translates to: YSSCFTRFSKTWMPPSVAFFLSK*YPLERD Trigger: ATCCCGTTCGAGTGGATATCACTTCGAAAGGAAAAA...GGCAACACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR GCA 90 bp | GGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGTTTCCAAGACTTGGATaGCACCCAGTGTTGCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: GMTQVYSSCFTRFSKTWMFPRLG*HPVLPC Trigger: ACACGGCAACACTGGGTGGCATCCAAGTCTTGGAAA...CATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR TCA 90 bp | CAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCAGTCCAGAAGGTATATCATaGACCACAAAACTCCCATCT | + |
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Preference number: 4 (lower is better) Translates to: QVYSSCFTRFSKTWMPPSPEGIS*TTKLPS Trigger: AGATGGGAGTTTTGTGGTTCATGATATACCTTCTGG...ACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCATTCAGCATATTCATTaGCTGCTCCATTTCCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: TQVYSSCFTRFSKTWMPPIQHIH*LLHFPS Trigger: AGACGGGAAATGGAGCAGTCAATGAATATGCTGAAT...GGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR GCA 90 bp | GAGATCAACGTCGGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAGCATATTCATTGACTaGTCCATTTCCCGTCTCATG | + |
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Preference number: 4 (lower is better) Translates to: EINVGMTQVYSSCFTRFSSIFID*SISRLM Trigger: CATGAGACGGGAAATGGAGCAGTCAATGAATATGCT...GGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGACGTTGATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCCAGTCTGACAACCTCTaGTGTTTTGATGTAATTCAC | + |
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Preference number: 4 (lower is better) Translates to: TQVYSSCFTRFSKTWMPPQSDNL*CFDVIH Trigger: GTGAATTACATCAAAACATCAGAGGTTGTCAGACTG...GGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR TCA 90 bp | GGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGAGAAGAGTCTTGTCATaGACTCAGAAACATCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GMTQVYSSCFTRFSKTWMRRVLS*TQKHQA Trigger: TGCCTGATGTTTCTGAGTTCATGACAAGACTCTTCT...CATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR TCA 90 bp | ATCAACGTCGGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGCATACAGACAAAAGATaGAAGCTGGGTTTTCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: INVGMTQVYSSCFTRFSKHTDKR*KLGFLV Trigger: CACGAGAAAACCCAGCTTTCATCTTTTGTCTGTATG...CTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGACGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CCA 90 bp | GAGATCAACGTCGGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCCAGGCAACTCATGGTTaGAATTCAGCATATTCATTG | + |
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Preference number: 4 (lower is better) Translates to: EINVGMTQVYSSCFTRFSQATHG*NSAYSL Trigger: CAATGAATATGCTGAATTCCAACCATGAGTTGCCTG...GGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGACGTTGATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CCA 90 bp | CAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCAGTACATCAGGCAACTCATaGTTGGAATTCAGCATATTC | + |
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Preference number: 4 (lower is better) Translates to: QVYSSCFTRFSKTWMPPSTSGNS*LEFSIF Trigger: GAATATGCTGAATTCCAACCATGAGTTGCCTGATGT...ACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR TCA 90 bp | ATCAACGTCGGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGAGATCAACGTCGGGATaGCTCAAGTTTATAGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: INVGMTQVYSSCFTRFSKRSTSG*LKFIVV Trigger: AACTACTATAAACTTGAGTCATCCCGACGTTGATCT...CTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGACGTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR GCA 90 bp | AATTCAGTGACATCAATATTGACCTCATACAGACAAAAGATGAAAGCTGGGTTTTTAAGGAAACCGACGTaGTCTTCTCCGTCTACCAGC | + |
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Preference number: 4 (lower is better) Translates to: NSVTSILTSYRQKMKAGFLRKPT*SSPSTS Trigger: GCTGGTAGACGGAGAAGAGCACGTCGGTTTCCTTAA...AAACCCAGCTTTCATCTTTTGTCTGTATGAGGTCAATATTGATGTCACTGAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CCA 90 bp | GAGATCAACGTCGGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCATCAAATCTGTAAGCTaGAGATACAACTTCCACTAC | + |
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Preference number: 4 (lower is better) Translates to: EINVGMTQVYSSCFTRFSIKSVS*RYNFHY Trigger: GTAGTGGAAGTTGTATCTCCAGCTTACAGATTTGAT...GGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGACGTTGATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR GCA 90 bp | GGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCAAGTTTATAGTAGTTaGTTCACACGGTTTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: GMTQVYSSCFTRFSKTWMQVYSS*FTRFSK Trigger: CTTGGAAAACCGTGTGAAGCAACTACTATAAACTTG...CATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS CCA 90 bp | CTCCCTCCCGATCCCTCAGCAGCAGCCCCGGGCACCTCCGAGCTCTaGACATCCCCCGATAGCAGCAGCAGCAGCAGGACGGGAAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LPPDPSAAAPGTSEL*TSPDSSSSSRTGKK Trigger: CTTCTTTCCCGTCCTGCTGCTGCTGCTGCTATCGGGGGATGTCCAGAGCTCGGAGGTGCCCGGGGCTGCTGCTGAGGGATCGGGAGGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256545.9 ENST00000532113.1 |
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| CDS TCA 90 bp | TGCTCTTCTCCGTCTACCAGCACTCGGGCCGCCGAGATCCAGTCCTaGGGCTTCACCCCTGGAACAACTGCACGCCCCTCAATCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: CSSPSTSTRAAEIQS*GFTPGTTARPSILK Trigger: CTTCAAGATTGAGGGGCGTGCAGTTGTTCCAGGGGTGAAGCCTCAGGACTGGATCTCGGCGGCCCGAGTGCTGGTAGACGGAGAAGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000256545.9 ENST00000527822.5 ENST00000532113.1 |
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| CDS CCA 90 bp | TACCAGCACTCGGGCCGCCGAGATCCAGTCCTGAGGCTTCACCCCTaGAACAACTGCACGCCCCTCAATCTTGAAGCGATCTCCTATGCC | + |
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Preference number: 5 (lower is better) Translates to: YQHSGRRDPVLRLHP*NNCTPLNLEAISYA Trigger: GGCATAGGAGATCGCTTCAAGATTGAGGGGCGTGCAGTTGTTCCAGGGGTGAAGCCTCAGGACTGGATCTCGGCGGCCCGAGTGCTGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000256545.9 ENST00000527822.5 ENST00000532113.1 |
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| CDS-3UTR CAA 90 bp | GTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCAGTGTTGCCGTGTTTGTTGCCAGCCCCACTTTaGCCTGTTTTACTGCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: VASHGFPRLGCHPVLPCLLPAPL*PVLLLP Trigger: CGGCAGCAGTAAAACAGGCAAAAGTGGGGCTGGCAA...CAAACACGGCAACACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CAA 90 bp | TATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCAGTGTTGCCGGATGCCACCCAGTGTaGCCGTGTTTGTGCAAATGC | + |
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Preference number: 5 (lower is better) Translates to: YSSCFTRFSKTWMPPSVAGCHPV*PCLCKC Trigger: GCATTTGCACAAACACGGCAACACTGGGTGGCATCC...GGCAACACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CAA 90 bp | GGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGGCACGCCCCTCAATCTaGAAGCGATCTCCTATGCCG | + |
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Preference number: 5 (lower is better) Translates to: GMTQVYSSCFTRFSKTWMARPSI*KRSPMP Trigger: CGGCATAGGAGATCGCTTCAAGATTGAGGGGCGTGC...CATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CAA 90 bp | GAGATCAACGTCGGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCCCTGACTACCTCCTTTaGCCAGCCCCACTTTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: EINVGMTQVYSSCFTRFSPDYLL*PAPLLP Trigger: AGGCAAAAGTGGGGCTGGCAAAAGGAGGTAGTCAGG...GGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGACGTTGATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CAA 90 bp | GGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCCAGTGTTGCCGTGTTaGTGCAAATGCCAGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: GMTQVYSSCFTRFSKTWMPVLPC*CKCQLW Trigger: CCAGAGCTGGCATTTGCACAAACACGGCAACACTGG...CATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CAA 90 bp | GTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCAGTGTTGCCGTGTTTGTCAGGCAACTCATGGTaGGAATTCAGCATATTCATT | + |
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Preference number: 5 (lower is better) Translates to: VASHGFPRLGCHPVLPCLSGNSW*EFSIFI Trigger: AATGAATATGCTGAATTCCAACCATGAGTTGCCTGA...CAAACACGGCAACACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CAA 90 bp | GGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGACGGTTTTCCAAGACTaGGATGCCACCCAGTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: GMTQVYSSCFTRFSKTWMTVFQD*DATQCC Trigger: GCAACACTGGGTGGCATCCAAGTCTTGGAAAACCGT...CATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CAA 90 bp | CAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCAGTCTGCCGCTGCTAGATTaGCCAGATGATTTTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: QVYSSCFTRFSKTWMPPSLPLLD*PDDFEE Trigger: CTCTTCAAAATCATCTGGCAAATCTAGCAGCGGCAG...ACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS CCA 90 bp | TCCTTTCGAAGTGATATCCACTCGAACGGGATCAAATCTGTAAGCTaGAGATACAACTTCCACTACATAAGATCCAGAAGGTATATCATG | + |
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Preference number: 5 (lower is better) Translates to: SFRSDIHSNGIKSVS*RYNFHYIRSRRYIM Trigger: CATGATATACCTTCTGGATCTTATGTAGTGGAAGTTGTATCTCCAGCTTACAGATTTGATCCCGTTCGAGTGGATATCACTTCGAAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256545.9 ENST00000528949.1 |
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| CDS-3UTR CAA 90 bp | CAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGACTTGGATGCCACCCAGTTCAGTGACATCAATATaGACCTCATACAGACAAAAG | + |
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Preference number: 5 (lower is better) Translates to: QVYSSCFTRFSKTWMPPSSVTSI*TSYRQK Trigger: CTTTTGTCTGTATGAGGTCAATATTGATGTCACTGA...ACTGGGTGGCATCCAAGTCTTGGAAAACCGTGTGAAGCAACTACTATAAACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS-3UTR CAA 90 bp | ATCAACGTCGGGATGACTCAAGTTTATAGTAGTTGCTTCACACGGTTTTCCAAGATTTGCCAGATGATTTaGAAGAGAAGAGTCTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: INVGMTQVYSSCFTRFSKICQMI*KRRVLS Trigger: TGACAAGACTCTTCTCTTCAAAATCATCTGGCAAAT...CTTGGAAAACCGTGTGAAGCAACTACTATAAACTTGAGTCATCCCGACGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS CCA 72 bp | GATCCCTCAGCAGCAGCCCCGGGCACCTCCGAGCTCTaGACATCCCCCGATAGCAGCAGCAGCAGCAGGACG | + |
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Preference number: 6 (lower is better) Translates to: DPSAAAPGTSEL*TSPDSSSSSRT Trigger: CGTCCTGCTGCTGCTGCTGCTATCGGGGGATGTCCAGAGCTCGGAGGTGCCCGGGGCTGCTGCTGAGGGATC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256545.9 ENST00000532113.1 |
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| CDS TCA 72 bp | CCGTCTACCAGCACTCGGGCCGCCGAGATCCAGTCCTaGGGCTTCACCCCTGGAACAACTGCACGCCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PSTSTRAAEIQS*GFTPGTTARPS Trigger: TGAGGGGCGTGCAGTTGTTCCAGGGGTGAAGCCTCAGGACTGGATCTCGGCGGCCCGAGTGCTGGTAGACGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000256545.9 ENST00000527822.5 ENST00000532113.1 |
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| CDS GCA 72 bp | CGAGATCCAGTCCTGAGGCTTCACCCCTGGAACAACTaGACGCCCCTCAATCTTGAAGCGATCTCCTATGCC | + |
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Preference number: 6 (lower is better) Translates to: RDPVLRLHPWNN*TPLNLEAISYA Trigger: GGCATAGGAGATCGCTTCAAGATTGAGGGGCGTGCAGTTGTTCCAGGGGTGAAGCCTCAGGACTGGATCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000256545.9 ENST00000527822.5 ENST00000532113.1 |
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| CDS GCA 72 bp | ACCACAAAACTCCCATCTGTCTTAAGGAAACCGACGTaGTCTTCTCCGTCTACCAGCACTCGGGCCGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: TTKLPSVLRKPT*SSPSTSTRAAE Trigger: CTCGGCGGCCCGAGTGCTGGTAGACGGAGAAGAGCACGTCGGTTTCCTTAAGACAGATGGGAGTTTTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256545.9 |
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| CDS CAA 72 bp | CATCAGGCAACTCATGGTTGGAATTCAGCATATTCATaGACTGCTCCATTTCCCGTCTCATGTCAGGATCAC | + |
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Preference number: 6 (lower is better) Translates to: HQATHGWNSAYS*TAPFPVSCQDH Trigger: GTGATCCTGACATGAGACGGGAAATGGAGCAGTCAATGAATATGCTGAATTCCAACCATGAGTTGCCTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000256545.9 ENST00000527822.5 ENST00000528949.1 |
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| CDS TCA 72 bp | ATCAGGCAACTCATGGTTGGAATTCAGCATATTCATTaGCTGCTCCATTTCCCGTCTCATGTCAGGATCACT | + |
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Preference number: 6 (lower is better) Translates to: IRQLMVGIQHIH*LLHFPSHVRIT Trigger: AGTGATCCTGACATGAGACGGGAAATGGAGCAGTCAATGAATATGCTGAATTCCAACCATGAGTTGCCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000256545.9 ENST00000527822.5 ENST00000528949.1 |
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| CDS GCA 72 bp | ACAACATACGCGTGCCTAGACATTTCAAAAGCAGGCTaGTGCAAAACTAGTGCTAACAAATTCATCCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: TTYACLDISKAG*CKTSANKFILS Trigger: AGACAGGATGAATTTGTTAGCACTAGTTTTGCAGCAGCCTGCTTTTGAAATGTCTAGGCACGCGTATGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532113.1 |
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| CDS CCA 72 bp | AGTGATATCCACTCGAACGGGATCAAATCTGTAAGCTaGAGATACAACTTCCACTACATAAGATCCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SDIHSNGIKSVS*RYNFHYIRSRR Trigger: CCTTCTGGATCTTATGTAGTGGAAGTTGTATCTCCAGCTTACAGATTTGATCCCGTTCGAGTGGATATCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256545.9 ENST00000528949.1 |
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| CDS CAA 90 bp | TTCATTGACTGCTCCATTTCCCGTCTCATGTCAGGATCACTTGTGTaGACCACTTTAGGCAGAAGCACAAATATCAATAAAGGAAGAACC | + |
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Preference number: 6 (lower is better) Translates to: FIDCSISRLMSGSLV*TTLGRSTNINKGRT Trigger: GGTTCTTCCTTTATTGATATTTGTGCTTCTGCCTAAAGTGGTCAACACAAGTGATCCTGACATGAGACGGGAAATGGAGCAGTCAATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000256545.9 ENST00000527822.5 ENST00000528949.1 |
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| CDS TCA 72 bp | TTTCATTTGGAGAGGATAGGGCAGTCTGACAACCTCTaGTGTTTTGATGTAATTCACATATCTTGCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: FHLERIGQSDNL*CFDVIHISCSH Trigger: ATGAGAGCAAGATATGTGAATTACATCAAAACATCAGAGGTTGTCAGACTGCCCTATCCTCTCCAAATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256545.9 ENST00000528949.1 |
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| CDS TCA 72 bp | ATTTGCCAGATGATTTTGAAGAGAAGAGTCTTGTCATaGACTCAGAAACATCAGGCAACTCATGGTTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: ICQMILKRRVLS*TQKHQATHGWN Trigger: ATTCCAACCATGAGTTGCCTGATGTTTCTGAGTTCATGACAAGACTCTTCTCTTCAAAATCATCTGGCAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000256545.9 ENST00000527822.5 ENST00000528949.1 |
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