Pregenerated sensors for EMC6 (Homo sapiens)
Ensembl gene IDs: ENSG00000127774Ensembl transcript IDs: ENST00000248378.6, ENST00000397133.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTCCTGCGGCCCTTCCCGCTTaGCCACCACCGCGGCCATCG | + |
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Preference number: 4 (lower is better) Translates to: NHLRTKEVYMVLIAGHSPAALPA*PPPRPS Trigger: CGATGGCCGCGGTGGTGGCCAAGCGGGAAGGGCCGC...AGGACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR TCA 90 bp | CGTTACAGAACAAGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGAGCCGTAGAGGCCGGTaGGGCCGAGGATGCCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RYRTSSEFNHLRTKEVYMSRRGR*GRGCRP Trigger: CGGCCGGCATCCTCGGCCTCACCGGCCTCTACGGCT...CATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCTTGTTCTGTAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR TCA 90 bp | TTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTAGCCGTAGAGGCCGGTaGGGCCGAGGATGCCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: FNHLRTKEVYMVLIAGHSSRRGR*GRGCRP Trigger: CGGCCGGCATCCTCGGCCTCACCGGCCTCTACGGCT...ACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR GCA 90 bp | AACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTCCTAGGTGGTGGCGCGTCTaGGTTCCCCGGCCACGGTGG | + |
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Preference number: 4 (lower is better) Translates to: NHLRTKEVYMVLIAGHSPRWWRV*VPRPRW Trigger: CCACCGTGGCCGGGGAACGCAGACGCGCCACCACCT...AGGACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397133.2 |
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| CDS-3UTR CCA 90 bp | CGTTACAGAACAAGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGCGGCCCTTCCCGCTTaGCCACCACCGCGGCCATCG | + |
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Preference number: 4 (lower is better) Translates to: RYRTSSEFNHLRTKEVYMAALPA*PPPRPS Trigger: CGATGGCCGCGGTGGTGGCCAAGCGGGAAGGGCCGC...CATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCTTGTTCTGTAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR TCA 90 bp | AACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTCCTGGCCCCCGACAGCGCTaGCACCGAGGTCCGGCAATA | + |
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Preference number: 4 (lower is better) Translates to: NHLRTKEVYMVLIAGHSPGPRQR*HRGPAI Trigger: TATTGCCGGACCTCGGTGTCAGCGCTGTCGGGGGCC...AGGACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR TCA 90 bp | AGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTAGACGCCGAGGAGATTaGGGGTCCGGGCCGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SSEFNHLRTKEVYMVLIARRRGD*GSGPAG Trigger: CCCGGCCGGCCCGGACCCTCAATCTCCTCGGCGTCT...AGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397133.2 |
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| CDS-3UTR CCA 90 bp | AGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTCGAGGATGCCGGCCGTaGCCCCCGACAGCGCTGACA | + |
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Preference number: 4 (lower is better) Translates to: SSEFNHLRTKEVYMVLIARGCRP*PPTALT Trigger: TGTCAGCGCTGTCGGGGGCCACGGCCGGCATCCTCG...AGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR TCA 90 bp | AGAACAAGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAGGCCCCCGACAGCGCTaGCACCGAGGTCCGGCAATA | + |
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Preference number: 4 (lower is better) Translates to: RTSSEFNHLRTKEVYMVLGPRQR*HRGPAI Trigger: TATTGCCGGACCTCGGTGTCAGCGCTGTCGGGGGCC...TAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCTTGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR CCA 90 bp | AGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCCCTCAGACGGGCAGTaGAAGAAATGCCCGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SEFNHLRTKEVYMVLIAGPSDGQ*KKCPRR Trigger: GCGCCGCGGGCATTTCTTCCACTGCCCGTCTGAGGG...GCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR CCA 90 bp | CGTTACAGAACAAGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGCCCTCAGACGGGCAGTaGAAGAAATGCCCGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RYRTSSEFNHLRTKEVYMPSDGQ*KKCPRR Trigger: GCGCCGCGGGCATTTCTTCCACTGCCCGTCTGAGGG...CATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCTTGTTCTGTAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR CCA 90 bp | TTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTGGAACAACGCGGAGCTaGCACCAGTCCTGGGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: FNHLRTKEVYMVLIAGHSGTTRS*HQSWAS Trigger: CGAGGCCCAGGACTGGTGCCAGCTCCGCGTTGTTCC...ACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397133.2 |
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| CDS-3UTR CCA 90 bp | CGTTACAGAACAAGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGGAACAACGCGGAGCTaGAACACGGCGCCGGACACA | + |
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Preference number: 4 (lower is better) Translates to: RYRTSSEFNHLRTKEVYMGTTRS*NTAPDT Trigger: TGTGTCCGGCGCCGTGTTCCAGCTCCGCGTTGTTCC...CATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCTTGTTCTGTAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248378.6 |
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| CDS-3UTR CCA 90 bp | AGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCGTTCCCCGGCCACGGTaGCCCAGTTACCTGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: SEFNHLRTKEVYMVLIAGVPRPR*PSYLEH Trigger: GTGTTCCAGGTAACTGGGCCACCGTGGCCGGGGAAC...GCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397133.2 |
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| CDS-3UTR CCA 90 bp | AGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGTGGCCCAGTTACCTaGAACACGGCGCCGGACACA | + |
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Preference number: 4 (lower is better) Translates to: SSEFNHLRTKEVYMVLIAGGPVT*NTAPDT Trigger: TGTGTCCGGCGCCGTGTTCCAGGTAACTGGGCCACC...AGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397133.2 |
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| CDS-3UTR GCA 90 bp | AGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGGCAGTGGAAGAAATaGCCGCGGCGCCATCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: SSEFNHLRTKEVYMVLIAGQWKK*PRRHLA Trigger: AGCAAGATGGCGCCGCGGGCATTTCTTCCACTGCCC...AGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248378.6 |
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| CDS-3UTR CCA 90 bp | CGTTACAGAACAAGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGAGCTGGCACCAGTCCTaGGCCTCGGATCTTCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RYRTSSEFNHLRTKEVYMSWHQS*ASDLPK Trigger: CTTTGGAAGATCCGAGGCCCAGGACTGGTGCCAGCT...CATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCTTGTTCTGTAACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397133.2 |
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| CDS-3UTR GCA 90 bp | TTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTAGTAGACGTGCACCATaGCGTAGAGGAACGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: FNHLRTKEVYMVLIAGHSSRRAP*RRGTSR Trigger: TCTGGACGTTCCTCTACGGCATGGTGCACGTCTACT...ACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR GCA 90 bp | AACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTCCTCTACATGGTGTTAATTaGTGGCCACAGTCCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: NHLRTKEVYMVLIAGHSPLHGVN*WPQSSR Trigger: TCGGGAGGACTGTGGCCAGCAATTAACACCATGTAG...AGGACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR GCA 90 bp | AGAACAAGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAAGTAGACGTGCACCATaGCGTAGAGGAACGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: RTSSEFNHLRTKEVYMVLSRRAP*RRGTSR Trigger: TCTGGACGTTCCTCTACGGCATGGTGCACGTCTACT...TAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCTTGTTCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR GCA 90 bp | AGAACAAGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTACTACATGGTGTTAATTaGTGGCCACAGTCCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: RTSSEFNHLRTKEVYMVLLHGVN*WPQSSR Trigger: TCGGGAGGACTGTGGCCAGCAATTAACACCATGTAG...TAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCTTGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR TCA 90 bp | TTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTGAGGTCTCCGTGATTTaGAATATTTGTTCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: FNHLRTKEVYMVLIAGHSEVSVI*NICSTS Trigger: GGAGGTGGAACAAATATTTCAAATCACGGAGACCTC...ACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR TCA 90 bp | AACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTCCTAAAGAGAGGTCTCCGTaGTTTGAAATATTTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: NHLRTKEVYMVLIAGHSPKERSP*FEIFVP Trigger: TGGAACAAATATTTCAAATCACGGAGACCTCTCTTT...AGGACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR TCA 90 bp | TTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTAAAGAGAGGTCTCCGTaGTTTGAAATATTTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FNHLRTKEVYMVLIAGHSKERSP*FEIFVP Trigger: TGGAACAAATATTTCAAATCACGGAGACCTCTCTTT...ACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR TCA 90 bp | TTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTACGCTTCATTTAATCTaGAGAATATTACAGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FNHLRTKEVYMVLIAGHSTLHLI*RILQAL Trigger: GAGAGCCTGTAATATTCTTCAGATTAAATGAAGCGT...ACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR TCA 90 bp | CGTTACAGAACAAGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGACGCTTCATTTAATCTaGAGAATATTACAGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: RYRTSSEFNHLRTKEVYMTLHLI*RILQAL Trigger: GAGAGCCTGTAATATTCTTCAGATTAAATGAAGCGT...CATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCTTGTTCTGTAACG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS TCA 90 bp | GAGGCCGGTGAGGCCGAGGATGCCGGCCGTGGCCCCCGACAGCGCTaGCACCGAGGTCCGGCAATAATCCAGGACGGCGGCGTTGCCCCG | + |
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Preference number: 5 (lower is better) Translates to: EAGEAEDAGRGPRQR*HRGPAIIQDGGVAP Trigger: CGGGGCAACGCCGCCGTCCTGGATTATTGCCGGACCTCGGTGTCAGCGCTGTCGGGGGCCACGGCCGGCATCCTCGGCCTCACCGGCCTC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS CCA 90 bp | GGTGGTGGCGCGTCTGCGTTCCCCGGCCACGGTGGCCCAGTTACCTaGAACACGGCGCCGGACACACTACTTAGCGTTCCCTCAGACGGG | + |
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Preference number: 5 (lower is better) Translates to: GGGASAFPGHGGPVT*NTAPDTLLSVPSDG Trigger: CCCGTCTGAGGGAACGCTAAGTAGTGTGTCCGGCGCCGTGTTCCAGGTAACTGGGCCACCGTGGCCGGGGAACGCAGACGCGCCACCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397133.2 |
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| CDS-3UTR CAA 90 bp | CGTTACAGAACAAGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGGCGGCCCTTCCCGCTaGGCCACCACCGCGGCCATC | + |
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Preference number: 5 (lower is better) Translates to: RYRTSSEFNHLRTKEVYMGGPSR*ATTAAI Trigger: GATGGCCGCGGTGGTGGCCAAGCGGGAAGGGCCGCC...CATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCTTGTTCTGTAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR CAA 90 bp | AGAACAAGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAGGCGGCCCTTCCCGCTaGGCCACCACCGCGGCCATC | + |
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Preference number: 5 (lower is better) Translates to: RTSSEFNHLRTKEVYMVLGGPSR*ATTAAI Trigger: GATGGCCGCGGTGGTGGCCAAGCGGGAAGGGCCGCC...TAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCTTGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR CAA 90 bp | AACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTCCTAAGACGCCGAGGAGATaGAGGGTCCGGGCCGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: NHLRTKEVYMVLIAGHSPKTPRR*RVRAGR Trigger: CCGGCCGGCCCGGACCCTCAATCTCCTCGGCGTCTT...AGGACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397133.2 |
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| CDS TCA 90 bp | GGTGAAGAGGCCCCCGATGAGGCCTCCTGTAAAGAGAGGTCTCCGTaGTTTGAAATATTTGTTCCACCTCCTTCCCGCCTTGAGAATGAG | + |
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Preference number: 5 (lower is better) Translates to: GEEAPDEASCKERSP*FEIFVPPPSRLENE Trigger: CTCATTCTCAAGGCGGGAAGGAGGTGGAACAAATATTTCAAATCACGGAGACCTCTCTTTACAGGAGGCCTCATCGGGGGCCTCTTCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR CAA 90 bp | TTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTCACCTCCTTCCCGCCTaGAGAATGAGGAGCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: FNHLRTKEVYMVLIAGHSHLLPA*RMRSRE Trigger: CTCCCTGCTCCTCATTCTCAAGGCGGGAAGGAGGTG...ACTGTGGCCAGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR CAA 90 bp | AGAACAAGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTACACCTCCTTCCCGCCTaGAGAATGAGGAGCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RTSSEFNHLRTKEVYMVLHLLPA*RMRSRE Trigger: CTCCCTGCTCCTCATTCTCAAGGCGGGAAGGAGGTG...TAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCTTGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS-3UTR CAA 90 bp | AGCAGCGAATTCAACCACTTAAGAACTAAGGAAGTCTACATGGTGTTAATTGCTAGAGGTCTCCGTGATTaGAAATATTTGTTCCACCTC | + |
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Preference number: 5 (lower is better) Translates to: SSEFNHLRTKEVYMVLIARGLRD*KYLFHL Trigger: GAGGTGGAACAAATATTTCAAATCACGGAGACCTCT...AGCAATTAACACCATGTAGACTTCCTTAGTTCTTAAGTGGTTGAATTCGCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS TCA 72 bp | GAGGCCGAGGATGCCGGCCGTGGCCCCCGACAGCGCTaGCACCGAGGTCCGGCAATAATCCAGGACGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: EAEDAGRGPRQR*HRGPAIIQDGG Trigger: GCCGCCGTCCTGGATTATTGCCGGACCTCGGTGTCAGCGCTGTCGGGGGCCACGGCCGGCATCCTCGGCCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS TCA 72 bp | CCTGGGCCTCGGATCTTCCAAAGACGCCGAGGAGATTaGGGGTCCGGGCCGGCCGGGAGGTGGTGGCGCGTC | + |
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Preference number: 6 (lower is better) Translates to: PGPRIFQRRRGD*GSGPAGRWWRV Trigger: GACGCGCCACCACCTCCCGGCCGGCCCGGACCCTCAATCTCCTCGGCGTCTTTGGAAGATCCGAGGCCCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397133.2 |
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| CDS CCA 72 bp | GGGAGGTGGTGGCGCGTCTGCGTTCCCCGGCCACGGTaGCCCAGTTACCTGGAACACGGCGCCGGACACACT | + |
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Preference number: 6 (lower is better) Translates to: GRWWRVCVPRPR*PSYLEHGAGHT Trigger: AGTGTGTCCGGCGCCGTGTTCCAGGTAACTGGGCCACCGTGGCCGGGGAACGCAGACGCGCCACCACCTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397133.2 |
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| CDS CAA 72 bp | TCCTGGGCCTCGGATCTTCCAAAGACGCCGAGGAGATaGAGGGTCCGGGCCGGCCGGGAGGTGGTGGCGCGT | + |
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Preference number: 6 (lower is better) Translates to: SWASDLPKTPRR*RVRAGREVVAR Trigger: ACGCGCCACCACCTCCCGGCCGGCCCGGACCCTCAATCTCCTCGGCGTCTTTGGAAGATCCGAGGCCCAGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397133.2 |
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| CDS CCA 72 bp | GCGTCTGCGTTCCCCGGCCACGGTGGCCCAGTTACCTaGAACACGGCGCCGGACACACTACTTAGCGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: ASAFPGHGGPVT*NTAPDTLLSVP Trigger: GGGAACGCTAAGTAGTGTGTCCGGCGCCGTGTTCCAGGTAACTGGGCCACCGTGGCCGGGGAACGCAGACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397133.2 |
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| CDS CCA 72 bp | CCGGACACACTACTTAGCGTTCCCTCAGACGGGCAGTaGAAGAAATGCCCGCGGCGCCATCTTGCTCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PDTLLSVPSDGQ*KKCPRRHLARK Trigger: CTTCCGAGCAAGATGGCGCCGCGGGCATTTCTTCCACTGCCCGTCTGAGGGAACGCTAAGTAGTGTGTCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248378.6 |
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| CDS TCA 72 bp | GCCCCCGATGAGGCCTCCTGTAAAGAGAGGTCTCCGTaGTTTGAAATATTTGTTCCACCTCCTTCCCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: APDEASCKERSP*FEIFVPPPSRL Trigger: AAGGCGGGAAGGAGGTGGAACAAATATTTCAAATCACGGAGACCTCTCTTTACAGGAGGCCTCATCGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS CAA 90 bp | CCGATGAGGCCTCCTGTAAAGAGAGGTCTCCGTGATTTGAAATATTaGTTCCACCTCCTTCCCGCCTTGAGAATGAGGAGCAGGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PMRPPVKRGLRDLKY*FHLLPALRMRSRES Trigger: GCTCTCCCTGCTCCTCATTCTCAAGGCGGGAAGGAGGTGGAACAAATATTTCAAATCACGGAGACCTCTCTTTACAGGAGGCCTCATCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS CAA 90 bp | AAGAGGCCCCCGATGAGGCCTCCTGTAAAGAGAGGTCTCCGTGATTaGAAATATTTGTTCCACCTCCTTCCCGCCTTGAGAATGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: KRPPMRPPVKRGLRD*KYLFHLLPALRMRS Trigger: GCTCCTCATTCTCAAGGCGGGAAGGAGGTGGAACAAATATTTCAAATCACGGAGACCTCTCTTTACAGGAGGCCTCATCGGGGGCCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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| CDS CAA 72 bp | CCGATGAGGCCTCCTGTAAAGAGAGGTCTCCGTGATTaGAAATATTTGTTCCACCTCCTTCCCGCCTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PMRPPVKRGLRD*KYLFHLLPALR Trigger: TCTCAAGGCGGGAAGGAGGTGGAACAAATATTTCAAATCACGGAGACCTCTCTTTACAGGAGGCCTCATCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000248378.6 ENST00000397133.2 |
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