Pregenerated sensors for EMC3 (Homo sapiens)
Ensembl gene IDs: ENSG00000125037Ensembl transcript IDs: ENST00000245046.6, ENST00000470827.2, ENST00000487465.5
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTACAGCAATATGTAAATTCTCTTTTGTTCCAAGCAACTGGGAAATaGGGTCCTTCATCCAAAGGAGTAGCCATTTCCAGTATAGCACCA | + |
|
Preference number: 1 (lower is better) Translates to: LQQYVNSLLFQATGK*GPSSKGVAISSIAP Trigger: TGGTGCTATACTGGAAATGGCTACTCCTTTGGATGAAGGACCTCATTTCCCAGTTGCTTGGAACAAAAGAGAATTTACATATTGCTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR-3UTR TCA 90 bp | TCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCACAGGCGAACTCCTGATCTCGTaGCCCACCCGCCTCAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: STAGRRLLVTYRGNTFTGELLIS*PTRLSL Trigger: GAGGCTGAGGCGGGTGGGTCACGAGATCAGGAGTTC...GCCTGTGAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR-3UTR GCA 90 bp | TCTGATGATCCCAAAGGCACTTTAGAATCTGGCAGTGCCTCAGGGTCACTGATTGCCTTGCTGCATGCCTaGCAGCTCGTGCATCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SDDPKGTLESGSASGSLIALLHA*QLVHPP Trigger: AGGAGGATGCACGAGCTGGCAGGCATGCAGCAAGGC...AATCAGTGACCCTGAGGCACTGCCAGATTCTAAAGTGCCTTTGGGATCATCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR-3UTR GCA 90 bp | TCTGATGATCCCAAAGGCACTTTAGAATCTGGCAGTGCCTCAGGGTCACTGATTGACAAGAACAAGCCTTaGTGCATGCCTGCCAGCTCG | + |
|
Preference number: 2 (lower is better) Translates to: SDDPKGTLESGSASGSLIDKNKP*CMPASS Trigger: CGAGCTGGCAGGCATGCAGCAAGGCTTGTTCTTGTC...AATCAGTGACCCTGAGGCACTGCCAGATTCTAAAGTGCCTTTGGGATCATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR CAA 90 bp | CTCCCCGCACTGATCCAAGATAGACAGTCAACTGCTGGCAGAAGGTaGTTAGTGACTTACAGAGGCAACACTTTCACAGGCAAAGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LPALIQDRQSTAGRR*LVTYRGNTFTGKEE Trigger: CTCTTCTTTGCCTGTGAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCTATCTTGGATCAGTGCGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR-3UTR GCA 90 bp | GTCAGCTCACTGCATCCTCCGCCTCCTAGGTTTAAGCAGTTCTCTGCCTCAGCCTTTTATTTCAAGAGGTaGCAGCTCCAAACAAAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: VSSLHPPPPRFKQFSASAFYFKR*QLQTKL Trigger: TAACTTTGTTTGGAGCTGGCACCTCTTGAAATAAAA...GGCTGAGGCAGAGAACTGCTTAAACCTAGGAGGCGGAGGATGCAGTGAGCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR-3UTR TCA 90 bp | GCACTGATCCAAGATAGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACCAAGCAACTGGGAAATaGGGTCCTTCATCCAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ALIQDRQSTAGRRLLVTYQATGK*GPSSKG Trigger: TCCTTTGGATGAAGGACCTCATTTCCCAGTTGCTTG...GTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCTATCTTGGATCAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR-3UTR GCA 90 bp | ACCTTTAATCCAGACAGAATTATTCTTGGGCACCCTTATCTGTGTGTCTACCAAAAGAACAAGCCTTGCTaGATGCCTGCCAGCTCGTGC | + |
|
Preference number: 2 (lower is better) Translates to: TFNPDRIILGHPYLCVYQKNKPC*MPASSC Trigger: GCACGAGCTGGCAGGCATGCAGCAAGGCTTGTTCTT...TTGGTAGACACACAGATAAGGGTGCCCAAGAATAATTCTGTCTGGATTAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR-3UTR GCA 90 bp | CTGACATCCAGATCAAGATTTTGCATTATTTATAGACAGTCTCTGATGATCCCAACAAGCCTTGCTGCATaGCTGCCAGCTCGTGCATCC | + |
|
Preference number: 2 (lower is better) Translates to: LTSRSRFCIIYRQSLMIPTSLAA*LPARAS Trigger: GGATGCACGAGCTGGCAGGCATGCAGCAAGGCTTGT...TGGGATCATCAGAGACTGTCTATAAATAATGCAAAATCTTGATCTGGATGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTTATCTGTGTGTCTACCAACAACTGCCGTCTCTCCCTTCTTACAGCAATAAACAGGAGTTTACTGTaGCTAGATGTCAGGCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: TLICVSTNNCRLSLLTAINRSLL*LDVRLT Trigger: AGTCAGCCTGACATCTAGCCACAGTAAACTCCTGTT...TATTGCTGTAAGAAGGGAGAGACGGCAGTTGTTGGTAGACACACAGATAAGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR-3UTR TCA 90 bp | ACCCTTATCTGTGTGTCTACCAACAACTGCCGTCTCTCCCTTCTTACAGCAATACTGGGCAGAATTAAGTaGTATAGAAGGTTTGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: TLICVSTNNCRLSLLTAILGRIK*YRRFAE Trigger: CTCAGCAAACCTTCTATATCACTTAATTCTGCCCAG...TATTGCTGTAAGAAGGGAGAGACGGCAGTTGTTGGTAGACACACAGATAAGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR-3UTR GCA 90 bp | AGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCAGTTACAAGGTTAAGTaGAACTCCAAGTTCCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: RQSTAGRRLLVTYRGNTFSYKVK*NSKFLT Trigger: TGTCAGGAACTTGGAGTTGCACTTAACCTTGTAACT...GAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR GCA 72 bp | AAAGGGGAACCCAGCCCAGACAAGAACAAGCCTTGCTaGATGCCTGCCAGCTCGTGCATCCTCCTTTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: KGEPSPDKNKPC*MPASSCILLFI Trigger: AATAAAAAGGAGGATGCACGAGCTGGCAGGCATGCAGCAAGGCTTGTTCTTGTCTGGGCTGGGTTCCCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR-3UTR CAA 90 bp | GCACTGATCCAAGATAGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACTGGGGTTTCACCATCTaGGCCAGGCTGATCTTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ALIQDRQSTAGRRLLVTYWGFTI*ARLILN Trigger: GTTCAAGATCAGCCTGGCCAAGATGGTGAAACCCCA...GTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCTATCTTGGATCAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR-3UTR CAA 90 bp | GCACTGATCCAAGATAGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACGTGGAGTCGAGTCGTTaGTTCTTAATTACTGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: ALIQDRQSTAGRRLLVTYVESSR*FLITAL Trigger: GAGTGCAGTAATTAAGAACAAACGACTCGACTCCAC...GTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCTATCTTGGATCAGTGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR GCA 72 bp | TTCTTGGGCACCCTTATCTGTGTGTCTACCAACAACTaGCGTCTCTCCCTTCTTACAGCAATATGTAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: FLGTLICVSTNN*RLSLLTAICKF Trigger: GAATTTACATATTGCTGTAAGAAGGGAGAGACGGCAGTTGTTGGTAGACACACAGATAAGGGTGCCCAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR TCA 72 bp | TATGTAAATTCTCTTTTGTTCCAAGCAACTGGGAAATaGGGTCCTTCATCCAAAGGAGTAGCCATTTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: YVNSLLFQATGK*GPSSKGVAISS Trigger: ACTGGAAATGGCTACTCCTTTGGATGAAGGACCTCATTTCCCAGTTGCTTGGAACAAAAGAGAATTTACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | CCTCCGCCTCCTAGGTTTAAGCAGTTCTCTGCCTCAGCCTCCCAAGTAGCTGGGTCTAGTGCCCACTGGTaGTCCGTCAGCTCCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPPPRFKQFSASASQVAGSSAHW*SVSSKA Trigger: AGCTTTGGAGCTGACGGATCACCAGTGGGCACTAGA...CCCAGCTACTTGGGAGGCTGAGGCAGAGAACTGCTTAAACCTAGGAGGCGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | CCTCCGCCTCCTAGGTTTAAGCAGTTCTCTGCCTCAGCCTCCCAAGTAGCTGGGAAGAACAAGCCTTGCTaGATGCCTGCCAGCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPPPRFKQFSASASQVAGKNKPC*MPASSC Trigger: GCACGAGCTGGCAGGCATGCAGCAAGGCTTGTTCTT...CCCAGCTACTTGGGAGGCTGAGGCAGAGAACTGCTTAAACCTAGGAGGCGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGACAAGAACAAGCCTTGCTGCATGCCTGCCAGCTCGTGCATCCTCCTTAACATGCCTTCGAAGTaGAGGTCTTTGGCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPDKNKPCCMPASSCILLNMPSK*RSLAMS Trigger: GCTCATGGCCAAAGACCTCCACTTCGAAGGCATGTT...AAGGAGGATGCACGAGCTGGCAGGCATGCAGCAAGGCTTGTTCTTGTCTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | GTCAGCTCACTGCATCCTCCGCCTCCTAGGTTTAAGCAGTTCTCTGCCTCAGCCGGTTGTGACAAAGCCTaGGAATGTCATGTTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSLHPPPPRFKQFSASAGCDKA*ECHVDP Trigger: TGGATCAACATGACATTCTCAGGCTTTGTCACAACC...GGCTGAGGCAGAGAACTGCTTAAACCTAGGAGGCGGAGGATGCAGTGAGCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | ACCTTTAATCCAGACAGAATTATTCTTGGGCACCCTTATCTGTGTGTCTACCAATTCCGGCGCGAACGTTaGCGTCACGTCGTGGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFNPDRIILGHPYLCVYQFRRER*RHVVAH Trigger: GTGCGCCACGACGTGACGTCAACGTTCGCGCCGGAA...TTGGTAGACACACAGATAAGGGTGCCCAAGAATAATTCTGTCTGGATTAAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | ACCCTTATCTGTGTGTCTACCAACAACTGCCGTCTCTCCCTTCTTACAGCAATAACTCTCCTGCGACTGTaGGCCGAGCTTACTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLICVSTNNCRLSLLTAITLLRL*AELTAF Trigger: GAAGGCAGTAAGCTCGGCTCACAGTCGCAGGAGAGT...TATTGCTGTAAGAAGGGAGAGACGGCAGTTGTTGGTAGACACACAGATAAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | GCACTGATCCAAGATAGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACTCTCCGGGGCACAGTTaGTTCTCTTCGGCTTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALIQDRQSTAGRRLLVTYSPGHS*FSSASP Trigger: AGGCGAAGCCGAAGAGAAGCAACTGTGCCCCGGAGA...GTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCTATCTTGGATCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | CCTCCGCCTCCTAGGTTTAAGCAGTTCTCTGCCTCAGCCTCCCAAGTAGCTGGGGAATCAGAGAGTAAATaGTCCGAAGCCCAAATACAT | + |
|
Preference number: 4 (lower is better) Translates to: PPPPRFKQFSASASQVAGESESK*SEAQIH Trigger: ATGTATTTGGGCTTCGGAGCATTTACTCTCTGATTC...CCCAGCTACTTGGGAGGCTGAGGCAGAGAACTGCTTAAACCTAGGAGGCGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | TCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCACAGGCGACAAGAACAAGCCTTaGTGCATGCCTGCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: STAGRRLLVTYRGNTFTGDKNKP*CMPASS Trigger: CGAGCTGGCAGGCATGCAGCAAGGCTTGTTCTTGTC...GCCTGTGAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | ACCCTTATCTGTGTGTCTACCAACAACTGCCGTCTCTCCCTTCTTACAGCAATAACCCCAGAACTCTCCTaGGACTGTGAGCCGAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLICVSTNNCRLSLLTAITPELS*DCEPSL Trigger: TAAGCTCGGCTCACAGTCGCAGGAGAGTTCTGGGGT...TATTGCTGTAAGAAGGGAGAGACGGCAGTTGTTGGTAGACACACAGATAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | AGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCCTTCTCAAGCCCCTTTaGCCGTGTACCCCAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RQSTAGRRLLVTYRGNTFLLKPL*PCTPEL Trigger: GAGTTCTGGGGTACACGGGCAAAGGGGCTTGAGAAG...GAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CCA 90 bp | GTCAGCTCACTGCATCCTCCGCCTCCTAGGTTTAAGCAGTTCTCTGCCTCAGCCAGACAGAATTATTCTTaGGCACCCTTATCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSSLHPPPPRFKQFSASARQNYS*APLSVC Trigger: ACACACAGATAAGGGTGCCCAAGAATAATTCTGTCT...GGCTGAGGCAGAGAACTGCTTAAACCTAGGAGGCGGAGGATGCAGTGAGCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | TCTGATGATCCCAAAGGCACTTTAGAATCTGGCAGTGCCTCAGGGTCACTGATTCTCCTGCATCATTCGTaGTTGGTCAGCGGCATTATC | + |
|
Preference number: 4 (lower is better) Translates to: SDDPKGTLESGSASGSLILLHHS*LVSGII Trigger: GATAATGCCGCTGACCAATCACGAATGATGCAGGAG...AATCAGTGACCCTGAGGCACTGCCAGATTCTAAAGTGCCTTTGGGATCATCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | TCTGATGATCCCAAAGGCACTTTAGAATCTGGCAGTGCCTCAGGGTCACTGATTGTGCCTCAGGGTCACTaGTTTTCACTGGGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SDDPKGTLESGSASGSLIVPQGH*FSLGRI Trigger: AATTCTGCCCAGTGAAAATCAGTGACCCTGAGGCAC...AATCAGTGACCCTGAGGCACTGCCAGATTCTAAAGTGCCTTTGGGATCATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | GCACTGATCCAAGATAGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACGGTGTCTCTCTCTTGTaGGTTGAGGGCAAGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALIQDRQSTAGRRLLVTYGVSLL*VEGKVH Trigger: GTGAACCTTGCCCTCAACTCACAAGAGAGAGACACC...GTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCTATCTTGGATCAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGACAAGAACAAGCCTTGCTGCATGCCTGCCAGCTCGTGCATCCTCCTTAGTAGCTCGATTCCTTaGTGTAACATAGGCTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPDKNKPCCMPASSCILLSSSIP*CNIGLK Trigger: TTTTAAGCCTATGTTACAGCAAGGAATCGAGCTACT...AAGGAGGATGCACGAGCTGGCAGGCATGCAGCAAGGCTTGTTCTTGTCTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | AGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCGCTGCTCCCGTCATCTaGTCCTGCATCATTCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQSTAGRRLLVTYRGNTFAAPVI*SCIIRD Trigger: ATCACGAATGATGCAGGAGCAGATGACGGGAGCAGC...GAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CCA 90 bp | ACCTTTAATCCAGACAGAATTATTCTTGGGCACCCTTATCTGTGTGTCTACCAAGAAAACTATCGGCGGTaGCCCAGGCTCGGTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFNPDRIILGHPYLCVYQENYRR*PRLGGS Trigger: TGAGCCACCGAGCCTGGGCCACCGCCGATAGTTTTC...TTGGTAGACACACAGATAAGGGTGCCCAAGAATAATTCTGTCTGGATTAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CCA 90 bp | ACCTTTAATCCAGACAGAATTATTCTTGGGCACCCTTATCTGTGTGTCTACCAAGTTGACGTCACGTCGTaGCGCACCTCAGTGGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFNPDRIILGHPYLCVYQVDVTS*RTSVAS Trigger: TGACGCCACTGAGGTGCGCCACGACGTGACGTCAAC...TTGGTAGACACACAGATAAGGGTGCCCAAGAATAATTCTGTCTGGATTAAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CCA 90 bp | ACCCTTATCTGTGTGTCTACCAACAACTGCCGTCTCTCCCTTCTTACAGCAATACTCTTGGTACAGAAATaGCACCGTCACTTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLICVSTNNCRLSLLTAILLVQK*HRHFPG Trigger: CCCAGGGAAGTGACGGTGCCATTTCTGTACCAAGAG...TATTGCTGTAAGAAGGGAGAGACGGCAGTTGTTGGTAGACACACAGATAAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | GCACTGATCCAAGATAGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACGGAGGTCTTTGGCCATaGGCTCTTCTTCGACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALIQDRQSTAGRRLLVTYGGLWP*ALLRHH Trigger: ATGATGTCGAAGAAGAGCTCATGGCCAAAGACCTCC...GTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCTATCTTGGATCAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | CTGACATCCAGATCAAGATTTTGCATTATTTATAGACAGTCTCTGATGATCCCAGAACTCCTGATCTCGTaGCCCACCCGCCTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTSRSRFCIIYRQSLMIPELLIS*PTRLSL Trigger: GAGGCTGAGGCGGGTGGGTCACGAGATCAGGAGTTC...TGGGATCATCAGAGACTGTCTATAAATAATGCAAAATCTTGATCTGGATGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | TCTGATGATCCCAAAGGCACTTTAGAATCTGGCAGTGCCTCAGGGTCACTGATTCAAGCAACTGGGAAATaGGGTCCTTCATCCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDDPKGTLESGSASGSLIQATGK*GPSSKG Trigger: TCCTTTGGATGAAGGACCTCATTTCCCAGTTGCTTG...AATCAGTGACCCTGAGGCACTGCCAGATTCTAAAGTGCCTTTGGGATCATCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | ACCCTTATCTGTGTGTCTACCAACAACTGCCGTCTCTCCCTTCTTACAGCAATACTCTCTCTTGTGAGTTaGGGGCAAGGTTCACATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLICVSTNNCRLSLLTAILSLVS*GQGSHL Trigger: GAGATGTGAACCTTGCCCTCAACTCACAAGAGAGAG...TATTGCTGTAAGAAGGGAGAGACGGCAGTTGTTGGTAGACACACAGATAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | ACCTTTAATCCAGACAGAATTATTCTTGGGCACCCTTATCTGTGTGTCTACCAAACAAGCCTTGCTGCATaGCTGCCAGCTCGTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TFNPDRIILGHPYLCVYQTSLAA*LPARAS Trigger: GGATGCACGAGCTGGCAGGCATGCAGCAAGGCTTGT...TTGGTAGACACACAGATAAGGGTGCCCAAGAATAATTCTGTCTGGATTAAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | TCTGATGATCCCAAAGGCACTTTAGAATCTGGCAGTGCCTCAGGGTCACTGATTAGGATGCATCTAATGTaGGTAGCTCGATTCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SDDPKGTLESGSASGSLIRMHLM*VARFLA Trigger: AGCAAGGAATCGAGCTACTCACATTAGATGCATCCT...AATCAGTGACCCTGAGGCACTGCCAGATTCTAAAGTGCCTTTGGGATCATCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | TCTGATGATCCCAAAGGCACTTTAGAATCTGGCAGTGCCTCAGGGTCACTGATTCTTCCCACTCTGTCTTaGAAGCTTTGTTTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SDDPKGTLESGSASGSLILPTLS*KLCLCL Trigger: CAGACACAAACAAAGCTTTCAAGACAGAGTGGGAAG...AATCAGTGACCCTGAGGCACTGCCAGATTCTAAAGTGCCTTTGGGATCATCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | GCACTGATCCAAGATAGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACGTGTCTACCAACAACTaGCGTCTCTCCCTTCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: ALIQDRQSTAGRRLLVTYVSTNN*RLSLLT Trigger: TGTAAGAAGGGAGAGACGGCAGTTGTTGGTAGACAC...GTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCTATCTTGGATCAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CCA 90 bp | TCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCACAGGCAGTCATAGGAGAAGGTaGCACTACCTTCCGTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: STAGRRLLVTYRGNTFTGSHRRR*HYLPFS Trigger: ACTAAACGGAAGGTAGTGCCACCTTCTCCTATGACT...GCCTGTGAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR CAA 72 bp | CTGATCCAAGATAGACAGTCAACTGCTGGCAGAAGGTaGTTAGTGACTTACAGAGGCAACACTTTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQDRQSTAGRR*LVTYRGNTFTG Trigger: GCCTGTGAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCTATCTTGGATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | ACCTTTAATCCAGACAGAATTATTCTTGGGCACCCTTATCTGTGTGTCTACCAAGAGGAAGTACCAGGATaGAGAACTCACCCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TFNPDRIILGHPYLCVYQEEVPG*RTHPGC Trigger: GCATCCTGGGTGAGTTCTGCATCCTGGTACTTCCTC...TTGGTAGACACACAGATAAGGGTGCCCAAGAATAATTCTGTCTGGATTAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CCA 90 bp | ACCCTTATCTGTGTGTCTACCAACAACTGCCGTCTCTCCCTTCTTACAGCAATATGCATCATTCGTGATTaGTCAGCGGCATTATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLICVSTNNCRLSLLTAICIIRD*SAALSW Trigger: CCAAGATAATGCCGCTGACCAATCACGAATGATGCA...TATTGCTGTAAGAAGGGAGAGACGGCAGTTGTTGGTAGACACACAGATAAGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CCA 90 bp | AGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCAACAGGAGTTTACTGTaGCTAGATGTCAGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RQSTAGRRLLVTYRGNTFNRSLL*LDVRLT Trigger: AGTCAGCCTGACATCTAGCCACAGTAAACTCCTGTT...GAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | GCACTGATCCAAGATAGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACCTTCGAATTAGGACTTaGCTGTCAGATACTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALIQDRQSTAGRRLLVTYLRIRT*LSDTCS Trigger: GGAACAAGTATCTGACAGTCAAGTCCTAATTCGAAG...GTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCTATCTTGGATCAGTGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | TCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCACAGGCTCTGTAATTCCTTTTTaGACATGCCTTCGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: STAGRRLLVTYRGNTFTGSVIPF*TCLRSG Trigger: TCCACTTCGAAGGCATGTTCAAAAAGGAATTACAGA...GCCTGTGAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | ACCTTTAATCCAGACAGAATTATTCTTGGGCACCCTTATCTGTGTGTCTACCAACCCGTCATCTGCTCCTaGATCATTCGTGATTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFNPDRIILGHPYLCVYQPVICS*IIRDWS Trigger: TGACCAATCACGAATGATGCAGGAGCAGATGACGGG...TTGGTAGACACACAGATAAGGGTGCCCAAGAATAATTCTGTCTGGATTAAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | TCTGATGATCCCAAAGGCACTTTAGAATCTGGCAGTGCCTCAGGGTCACTGATTAGTTACAAGGTTAAGTaGAACTCCAAGTTCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SDDPKGTLESGSASGSLISYKVK*NSKFLT Trigger: TGTCAGGAACTTGGAGTTGCACTTAACCTTGTAACT...AATCAGTGACCCTGAGGCACTGCCAGATTCTAAAGTGCCTTTGGGATCATCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CCA 90 bp | ACCCTTATCTGTGTGTCTACCAACAACTGCCGTCTCTCCCTTCTTACAGCAATATTTGTTCCAAGCAACTaGGAAATGAGGTCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLICVSTNNCRLSLLTAIFVPSN*EMRSFI Trigger: GATGAAGGACCTCATTTCCCAGTTGCTTGGAACAAA...TATTGCTGTAAGAAGGGAGAGACGGCAGTTGTTGGTAGACACACAGATAAGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | ACCTTTAATCCAGACAGAATTATTCTTGGGCACCCTTATCTGTGTGTCTACCAAATGGGACCTTGGTTGTaGCAAAGCCTGAGAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFNPDRIILGHPYLCVYQMGPWL*QSLRMS Trigger: TGACATTCTCAGGCTTTGTCACAACCAAGGTCCCAT...TTGGTAGACACACAGATAAGGGTGCCCAAGAATAATTCTGTCTGGATTAAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | TCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCACAGGCGGATTTGATAAGATTTaGTACACTGACATCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: STAGRRLLVTYRGNTFTGGFDKI*YTDIQI Trigger: GATCTGGATGTCAGTGTATCAAATCTTATCAAATCC...GCCTGTGAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CCA 90 bp | CTGACATCCAGATCAAGATTTTGCATTATTTATAGACAGTCTCTGATGATCCCAAGGCACTTTAGAATCTaGCAGTGCCTCAGGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LTSRSRFCIIYRQSLMIPRHFRI*QCLRVT Trigger: AGTGACCCTGAGGCACTGCCAGATTCTAAAGTGCCT...TGGGATCATCAGAGACTGTCTATAAATAATGCAAAATCTTGATCTGGATGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR TCA 90 bp | ACCTTTAATCCAGACAGAATTATTCTTGGGCACCCTTATCTGTGTGTCTACCAACTGGGCAGAATTAAGTaGTATAGAAGGTTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TFNPDRIILGHPYLCVYQLGRIK*YRRFAE Trigger: CTCAGCAAACCTTCTATATCACTTAATTCTGCCCAG...TTGGTAGACACACAGATAAGGGTGCCCAAGAATAATTCTGTCTGGATTAAAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR GCA 90 bp | AGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCTTTTATTTCAAGAGGTaGCAGCTCCAAACAAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RQSTAGRRLLVTYRGNTFFYFKR*QLQTKL Trigger: TAACTTTGTTTGGAGCTGGCACCTCTTGAAATAAAA...GAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CCA 90 bp | ACCTTTAATCCAGACAGAATTATTCTTGGGCACCCTTATCTGTGTGTCTACCAAGGACGGTTTAATTTGTaGAGTCGAGTCGTTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFNPDRIILGHPYLCVYQGRFNL*SRVVCS Trigger: AGAACAAACGACTCGACTCCACAAATTAAACCGTCC...TTGGTAGACACACAGATAAGGGTGCCCAAGAATAATTCTGTCTGGATTAAAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| 3UTR CAA 72 bp | CATTTCCAGTATAGCACCACTGATTTGTCAATGGATTaGATAAGATTTGATACACTGACATCCAGATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HFQYSTTDLSMD*IRFDTLTSRSR Trigger: TCTTGATCTGGATGTCAGTGTATCAAATCTTATCAAATCCATTGACAAATCAGTGGTGCTATACTGGAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | CCTCCGCCTCCTAGGTTTAAGCAGTTCTCTGCCTCAGCCTCCCAAGTAGCTGGGCCTTCTCAAGCCCCTTaGCCCGTGTACCCCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: PPPPRFKQFSASASQVAGPSQAP*PVYPRT Trigger: AGTTCTGGGGTACACGGGCAAAGGGGCTTGAGAAGG...CCCAGCTACTTGGGAGGCTGAGGCAGAGAACTGCTTAAACCTAGGAGGCGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | GTCAGCTCACTGCATCCTCCGCCTCCTAGGTTTAAGCAGTTCTCTGCCTCAGCCTTCTCCGGGGCACAGTaGCTTCTCTTCGGCTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSSLHPPPPRFKQFSASAFSGAQ*LLFGFA Trigger: GGCGAAGCCGAAGAGAAGCAACTGTGCCCCGGAGAA...GGCTGAGGCAGAGAACTGCTTAAACCTAGGAGGCGGAGGATGCAGTGAGCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGACAAGAACAAGCCTTGCTGCATGCCTGCCAGCTCGTGCATCCTCCTTTGGGGTTTCACCATCTaGGCCAGGCTGATCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPDKNKPCCMPASSCILLWGFTI*ARLILN Trigger: GTTCAAGATCAGCCTGGCCAAGATGGTGAAACCCCA...AAGGAGGATGCACGAGCTGGCAGGCATGCAGCAAGGCTTGTTCTTGTCTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | ACCCAGCCCAGACAAGAACAAGCCTTGCTGCATGCCTGCCAGCTCGTGCATCCTTCTGTCTTGAAAGCTTaGTTTGTGTCTGCGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TQPRQEQALLHACQLVHPSVLKA*FVSAGM Trigger: CATGCCCGCAGACACAAACAAAGCTTTCAAGACAGA...AGGATGCACGAGCTGGCAGGCATGCAGCAAGGCTTGTTCTTGTCTGGGCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | ACCCAGCCCAGACAAGAACAAGCCTTGCTGCATGCCTGCCAGCTCGTGCATCCTCAGACAGAATTATTCTaGGGCACCCTTATCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TQPRQEQALLHACQLVHPQTELF*GTLICV Trigger: CACACAGATAAGGGTGCCCAAGAATAATTCTGTCTG...AGGATGCACGAGCTGGCAGGCATGCAGCAAGGCTTGTTCTTGTCTGGGCTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGACAAGAACAAGCCTTGCTGCATGCCTGCCAGCTCGTGCATCCTCCTTGTGGAGTCGAGTCGTTaGTTCTTAATTACTGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SPDKNKPCCMPASSCILLVESSR*FLITAL Trigger: GAGTGCAGTAATTAAGAACAAACGACTCGACTCCAC...AAGGAGGATGCACGAGCTGGCAGGCATGCAGCAAGGCTTGTTCTTGTCTGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | AGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCAGACAAGAACAAGCCTaGCTGCATGCCTGCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RQSTAGRRLLVTYRGNTFRQEQA*LHACQL Trigger: GAGCTGGCAGGCATGCAGCAAGGCTTGTTCTTGTCT...GAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | TCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCACAGGCTCTCTCTCTTGTGAGTaGAGGGCAAGGTTCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: STAGRRLLVTYRGNTFTGSLSCE*RARFTS Trigger: AGATGTGAACCTTGCCCTCAACTCACAAGAGAGAGA...GCCTGTGAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | AGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACAGAGGCAACACTTTCGCTTCCCACTCTGTCTaGAAAGCTTTGTTTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RQSTAGRRLLVTYRGNTFASHSV*KALFVS Trigger: AGACACAAACAAAGCTTTCAAGACAGAGTGGGAAGC...GAAAGTGTTGCCTCTGTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | GCACTGATCCAAGATAGACAGTCAACTGCTGGCAGAAGGTTGTTAGTGACTTACCCTGAGAATGTCATGTaGATCCATCCACCAATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALIQDRQSTAGRRLLVTYPENVM*IHPPIR Trigger: TCTTATTGGTGGATGGATCAACATGACATTCTCAGG...GTAAGTCACTAACAACCTTCTGCCAGCAGTTGACTGTCTATCTTGGATCAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | ACCTTTAATCCAGACAGAATTATTCTTGGGCACCCTTATCTGTGTGTCTACCAAGTCAGCGGCATTATCTaGGCCCAGAATCAGAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TFNPDRIILGHPYLCVYQVSGII*AQNQRV Trigger: TACTCTCTGATTCTGGGCCAAGATAATGCCGCTGAC...TTGGTAGACACACAGATAAGGGTGCCCAAGAATAATTCTGTCTGGATTAAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | CTGACATCCAGATCAAGATTTTGCATTATTTATAGACAGTCTCTGATGATCCCAACAGGACGGTTTAATTaGTGGAGTCGAGTCGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LTSRSRFCIIYRQSLMIPTGRFN*WSRVVC Trigger: ACAAACGACTCGACTCCACAAATTAAACCGTCCTGT...TGGGATCATCAGAGACTGTCTATAAATAATGCAAAATCTTGATCTGGATGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS-3UTR CAA 90 bp | CTGACATCCAGATCAAGATTTTGCATTATTTATAGACAGTCTCTGATGATCCCAGTCTGTAATTCCTTTTaGAACATGCCTTCGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTSRSRFCIIYRQSLMIPVCNSF*NMPSKW Trigger: CCACTTCGAAGGCATGTTCAAAAAGGAATTACAGAC...TGGGATCATCAGAGACTGTCTATAAATAATGCAAAATCTTGATCTGGATGTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245046.6 |
||
| CDS GCA 72 bp | TCTTCGGCTTCGCCTCCGGGCCTTCTCAAGCCCCTTTaGCCGTGTACCCCAGAACTCTCCTGCGACTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSASPPGLLKPL*PCTPELSCDCE Trigger: CTCACAGTCGCAGGAGAGTTCTGGGGTACACGGGCAAAGGGGCTTGAGAAGGCCCGGAGGCGAAGCCGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000245046.6 ENST00000470827.2 ENST00000487465.5 |
||
| CDS CAA 72 bp | GCTCTTGGTAACACCTTTCAGAGCATTGCTGCAGCTTaGAAAGGTGAAGGAGTATACCTTGAAAGCTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ALGNTFQSIAAA*KGEGVYLESFV Trigger: AACAAAGCTTTCAAGGTATACTCCTTCACCTTTCAAAGCTGCAGCAATGCTCTGAAAGGTGTTACCAAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487465.5 |
||
| CDS CAA 90 bp | TTTAAAATAGCTCTTGGTAACACCTTTCAGAGCATTGCTGCAGCTTaGAAAGGTGAAGGAGTATACCTTGAAAGCTTTGTTTGTGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FKIALGNTFQSIAAA*KGEGVYLESFVCVC Trigger: GCAGACACAAACAAAGCTTTCAAGGTATACTCCTTCACCTTTCAAAGCTGCAGCAATGCTCTGAAAGGTGTTACCAAGAGCTATTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487465.5 |
||