Pregenerated sensors for EMC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000104412Ensembl transcript IDs: ENST00000220853.8, ENST00000517593.5, ENST00000517784.5, ENST00000519450.2, ENST00000519642.1, ENST00000520294.5, ENST00000524143.5
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGAGACAGAATGGATGGTTGATTTCCTTCACTGCAAAAAGTTCTaGCTCGTACTAATCAGACTATACAGAATTAAACTACCACTTCTG | + |
|
Preference number: 1 (lower is better) Translates to: RETEWMVDFLHCKKF*LVLIRLYRIKLPLL Trigger: CAGAAGTGGTAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAGGAAATCAACCATCCATTCTGTCTCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR GCA 90 bp | AGCTACCACAATAGAGAGACAGAATGGATGGTTGATTTCCTTCACTaGAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAA | + |
|
Preference number: 1 (lower is better) Translates to: SYHNRETEWMVDFLH*KKFCLVLIRLYRIK Trigger: TTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAGGAAATCAACCATCCATTCTGTCTCTCTATTGTGGTAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGCTGCGATCACGTCACTaGACTCCAGCCTGGGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMLRSRH*TPAWVT Trigger: TGTCACCCAGGCTGGAGTGCAGTGACGTGATCGCAG...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGGAGGTTGCAGTGAGCTaGGATCACGTCACTGCACTC | + |
|
Preference number: 2 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMEVAVS*DHVTAL Trigger: GAGTGCAGTGACGTGATCGCAGCTCACTGCAACCTC...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGTGTCCAAAGCAGCAATaGCAAGTCTGTAGATGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMCPKQQ*QVCRCL Trigger: GAGGCATCTACAGACTTGTCATTGCTGCTTTGGACA...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAGGGAGGAGGTTGCAGTaGGCTGCGATCACGTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLGRRLQ*AAITSL Trigger: CAGTGACGTGATCGCAGCTCACTGCAACCTCCTCCC...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGGGTAGTGAAACAACGTaGAGGCACTATTTTCTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMGSETT*RHYFLY Trigger: GTAAAGAAAATAGTGCCTGCACGTTGTTTCACTACC...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGATTCAAATAGCCCACTaGAATGTACAGCAAAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMIQIAH*NVQQNP Trigger: TGGATTTTGCTGTACATTCCAGTGGGCTATTTGAAT...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTATGCAACCTCTGGAGTTaGGGTAAGGTCCTAATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLCNLWS*GKVLIS Trigger: AGAGATTAGGACCTTACCCCAACTCCAGAGGTTGCA...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTATCTGTTTCAGATCAATaGAGGTGCAACCTCTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLSVSDQ*RCNLWS Trigger: ACTCCAGAGGTTGCACCTTCATTGATCTGAAACAGA...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAAGGAAGAGGGATCCTTaGCACTATCAGATCAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLRKRDP*HYQIKL Trigger: TAGTTTGATCTGATAGTGGCAAGGATCCCTCTTCCT...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAAGAATTACCTTCAGATaGGAAGAGTTCTTTCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLRITFR*EEFFHR Trigger: TCTGTGAAAGAACTCTTCTCATCTGAAGGTAATTCT...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAAATATATTAATCAGCTaGCTATTACTCGTGGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLNILIS*LLLVAE Trigger: TTCTGCCACGAGTAATAGGCAGCTGATTAATATATT...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGAGGCACAAGAATCGCTaGAACCCGGGAGGAGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMRHKNR*NPGGGC Trigger: GCAACCTCCTCCCGGGTTCAAGCGATTCTTGTGCCT...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR GCA 72 bp | CTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTaGACCTTTAGGCATGCTGTTGGCCAGAAAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LTFAVSWLFDGS*TFRHAVGQKEE Trigger: CTCCTCTTTCTGGCCAACAGCATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGAAGGTCCTAATCTCTTaGAGGAAGAGGGATCCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMKVLIS*RKRDPC Trigger: GCAAGGATCCCTCTTCCTCAAAGAGATTAGGACCTT...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR CCA 72 bp | TGGTTAGTAGCTACCACAATAGAGAGACAGAATGGATaGTTGATTTCCTTCACTGCAAAAAGTTCTGCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: WLVATTIERQNG*LISFTAKSSAS Trigger: CGAGGCAGAACTTTTTGCAGTGAAGGAAATCAACCATCCATTCTGTCTCTCTATTGTGGTAGCTACTAACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR CCA 72 bp | AATAATTGGGGAGTTTGGCAATTGCTCATCTTGATTTaGGTGTTCAACAATGCCATATCAGGGACCCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: NNWGVWQLLILI*VFNNAISGTQD Trigger: ATCCTGGGTCCCTGATATGGCATTGTTGAACACCCAAATCAAGATGAGCAATTGCCAAACTCCCCAATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGCTAAACACTTCTAGATaGTCAATTCCTCCACAATCC | + |
|
Preference number: 3 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMLNTSR*SIPPQS Trigger: GGATTGTGGAGGAATTGACAATCTAGAAGTGTTTAG...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGAGACAGAATGGATGGTaGATTTCCTTCACTGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMRQNGW*ISFTAK Trigger: TTTTGCAGTGAAGGAAATCAACCATCCATTCTGTCT...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTACTCCACAATCCCCACTaGTCCAAAGCAGCAATGACA | + |
|
Preference number: 3 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLLHNPH*SKAAMT Trigger: TGTCATTGCTGCTTTGGACAAGTGGGGATTGTGGAG...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAGAGGAAGAGGGATCCTaGCCACTATCAGATCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLEEEGS*PLSDQT Trigger: AGTTTGATCTGATAGTGGCAAGGATCCCTCTTCCTC...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR CCA 72 bp | CATATGGTTAGTAGCTACCACAATAGAGAGACAGAATaGATGGTTGATTTCCTTCACTGCAAAAAGTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HMVSSYHNRETE*MVDFLHCKKFC Trigger: GCAGAACTTTTTGCAGTGAAGGAAATCAACCATCCATTCTGTCTCTCTATTGTGGTAGCTACTAACCATATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR GCA 72 bp | AATAGAGAGACAGAATGGATGGTTGATTTCCTTCACTaGAAAAAGTTCTGCCTCGTACTAATCAGACTATAC | + |
|
Preference number: 3 (lower is better) Translates to: NRETEWMVDFLH*KKFCLVLIRLY Trigger: GTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAGGAAATCAACCATCCATTCTGTCTCTCTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAACATATGCTGTGACTTaGCTATCACCAGTAAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLTYAVT*LSPVRS Trigger: ACTCCTTACTGGTGATAGCAAAGTCACAGCATATGT...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR GCA 72 bp | GAATGGATGGTTGATTTCCTTCACTGCAAAAAGTTCTaGCTCGTACTAATCAGACTATACAGAATTAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: EWMVDFLHCKKF*LVLIRLYRIKL Trigger: TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAGGAAATCAACCATCCATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR CAA 72 bp | GTCCCAGCTACTCAGAGGCTGAGGCACAAGAATCGCTaGAACCCGGGAGGAGGTTGCAGTGAGCTGCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VPATQRLRHKNR*NPGGGCSELRS Trigger: TGATCGCAGCTCACTGCAACCTCCTCCCGGGTTCAAGCGATTCTTGTGCCTCAGCCTCTGAGTAGCTGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGGACATCGTAAAGCTCTaGGACCTTCGCCATCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMDIVKL*DLRHLP Trigger: GGGAAGATGGCGAAGGTCTCAGAGCTTTACGATGTC...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGTGCCTGTTAATCGCTTaGCTCTGTGACTGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMCLLIA*LCDCQG Trigger: TCCCTGGCAGTCACAGAGTCAAGCGATTAACAGGCA...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGAATCGCTTGACTCTGTaGCTGCCAGGGAACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMNRLTL*LPGNCL Trigger: AAGACAGTTCCCTGGCAGTCACAGAGTCAAGCGATT...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGAGTTCTGCAAGTTCATaGCAGGCTTCTTGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMSSASS*QASWSP Trigger: TGGAGACCAAGAAGCCTGGCATGAACTTGCAGAACT...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGTGCAACCTCTGGAGTTaGGGTAAGGTCCTAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMCNLWS*GKVLIS Trigger: AGAGATTAGGACCTTACCCCAACTCCAGAGGTTGCA...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTACTGCGATCACGTCACTaGACTCCAGCCTGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLLRSRH*TPAWVT Trigger: TGTCACCCAGGCTGGAGTGCAGTGACGTGATCGCAG...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGCCTGGGCTTTTCGAATaGCAATCTTACGCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMPGLFE*QSYAFL Trigger: CAAGAAAGCGTAAGATTGCCATTCGAAAAGCCCAGG...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGTCATGCCAGGCTTCTTaGTCTCCAACAAATTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMSCQAS*SPTNCS Trigger: GGAACAATTTGTTGGAGACCAAGAAGCCTGGCATGA...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGTGTCTTCTCAGCTCTTaGAGACAAAACAATGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMCLLSS*RQNNAK Trigger: CTTGGCATTGTTTTGTCTTCAAGAGCTGAGAAGACA...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGAACCTTAAGACTGGGTaGTCTGCAATGTTTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMNLKTG*SAMFPT Trigger: TGTTGGAAACATTGCAGATCACCCAGTCTTAAGGTT...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGGGCAATTGCTCATCTTaGTTTGGGTGTTCAACAATG | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMGNCSS*FGCSTM Trigger: CATTGTTGAACACCCAAATCAAGATGAGCAATTGCC...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAGAGGTTGCAGTGAGCTaGGATCACGTCACTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLEVAVS*DHVTAL Trigger: GAGTGCAGTGACGTGATCGCAGCTCACTGCAACCTC...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGGAGAGACAGAATGGATaGTTGATTTCCTTCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMERQNG*LISFTA Trigger: TGCAGTGAAGGAAATCAACCATCCATTCTGTCTCTC...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGACATTTGCTGTTTCATaGTTGTTTGATGGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMTFAVS*LFDGSC Trigger: GCAGCTGCCATCAAACAACCATGAAACAGCAAATGT...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGGACAGAATGGATGGTTaGTTTCCTTCACTGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMDRMDG*FPSLQK Trigger: TTTTTGCAGTGAAGGAAATCAACCATCCATTCTGTC...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGCTTCTTACTTCGACCTaGAAACTGATAAGCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMLLTST*KLISSV Trigger: AACAGAGCTTATCAGTTTGCAGGTCGAAGTAAGAAG...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTACATTCAGCTCCCGAATaGCCTCCACATTTTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLHSAPE*PPHFSP Trigger: AGGGGAAAAATGTGGAGGCCATTCGGGAGCTGAATG...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGTTTTCAAGTCCACCTTaGGTATACTTAACTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMFSSPP*VYLTSA Trigger: TGCTGAAGTTAAGTATACCCAAGGTGGACTTGAAAA...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGCCAACTTCCACAATTTaGTCACTATTTCTTGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMPTSTI*SLFLEF Trigger: AAACTCAAGAAATAGTGAGCAAATTGTGGAAGTTGG...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGAGAAGCAATATGACTTaGCGACATATAAAGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMRSNMT*RHIKSK Trigger: TTTGGACTTTATATGTCGGCAAGTCATATTGCTTCT...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGGTTTATTTGACTAGCTaGCCAACTAGCATATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMVYLTS*PTSIFH Trigger: ATGAAATATGCTAGTTGGGCAGCTAGTCAAATAAAC...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTATTGGGTGTTCAACAATaGCATATCAGGGACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLLGVQQ*HIRDPG Trigger: TCCTGGGTCCCTGATATGGCATTGTTGAACACCCAA...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| 3UTR CAA 72 bp | TCATTTAATAATTGGGGAGTTTGGCAATTGCTCATCTaGATTTGGGTGTTCAACAATGCCATATCAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SFNNWGVWQLLI*IWVFNNAISGT Trigger: GGTCCCTGATATGGCATTGTTGAACACCCAAATCAAGATGAGCAATTGCCAAACTCCCCAATTATTAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR TCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTATCATTTCTTCCCAAGTaGCATCGTAAAGCTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLSFLPK*HRKALR Trigger: TCTCAGAGCTTTACGATGTCACTTGGGAAGAAATGA...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR TCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAACTTCAGCATACTGCTaGCAGTATAAGTGGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLTSAYC*QYKWLC Trigger: ACACAACCACTTATACTGTCAGCAGTATGCTGAAGT...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTATTGAAGACAAAACAATaGCAAGTCATCCCGACCATA | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLLKTKQ*QVIPTI Trigger: TATGGTCGGGATGACTTGGCATTGTTTTGTCTTCAA...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAATTGATGTAAAGTTCTaGAAGTTCATGCCAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLIDVKF*KFMPGF Trigger: GAAGCCTGGCATGAACTTGCAGAACTTTACATCAAT...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAGTTGATTTCCTTCACTaGAAAAAGTTCTGCCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLVDFLH*KKFCLV Trigger: TACGAGGCAGAACTTTTTGCAGTGAAGGAAATCAAC...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTACATCATATCTTTCCATaGCTTCAAATCTCATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLHHIFP*LQISCL Trigger: CAGGCATGAGATTTGAAGCCATGGAAAGATATGATG...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAAATAGAGAGACAGAATaGATGGTTGATTTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLNRETE*MVDFLH Trigger: GTGAAGGAAATCAACCATCCATTCTGTCTCTCTATT...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTATTGCTCATCTTGATTTaGGTGTTCAACAATGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLLLILI*VFNNAI Trigger: TATGGCATTGTTGAACACCCAAATCAAGATGAGCAA...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAACAAAAGGCTGCTTTTaGATAGTCATGTTCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLTKGCF*IVMFID Trigger: ATCAATGAACATGACTATGCAAAAGCAGCCTTTTGT...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CCA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAAATAATTGGGGAGTTTaGCAATTGCTCATCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLNNWGV*QLLILI Trigger: AATCAAGATGAGCAATTGCCAAACTCCCCAATTATT...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS TCA 90 bp | TTCCTAAATGCCTATGTGCCAGGCCTGATCTGGGCACTTCCCAAGTaGCATCGTAAAGCTCTGAGACCTTCGCCATCTTCCCAGAACCTA | + |
|
Preference number: 5 (lower is better) Translates to: FLNAYVPGLIWALPK*HRKALRPSPSSQNL Trigger: TAGGTTCTGGGAAGATGGCGAAGGTCTCAGAGCTTTACGATGTCACTTGGGAAGTGCCCAGATCAGGCCTGGCACATAGGCATTTAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524143.5 |
||
| CDS GCA 90 bp | GCTGAGAATACTGAGGCACAGAGATGTAAACTGAATCCCAGGCTGTaGCACTCCAGACAGCCTGTACTCTTCAACCACTACATATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AENTEAQRCKLNPRL*HSRQPVLFNHYICC Trigger: GCAGCATATGTAGTGGTTGAAGAGTACAGGCTGTCTGGAGTGGCACAGCCTGGGATTCAGTTTACATCTCTGTGCCTCAGTATTCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519450.2 |
||
| CDS TCA 90 bp | ATCAACATGCTAGAGCTGAGAATACTGAGGCACAGAGATGTAAACTaGATCCCAGGCTGTGCCACTCCAGACAGCCTGTACTCTTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: INMLELRILRHRDVN*IPGCATPDSLYSST Trigger: GGTTGAAGAGTACAGGCTGTCTGGAGTGGCACAGCCTGGGATTCAGTTTACATCTCTGTGCCTCAGTATTCTCAGCTCTAGCATGTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519450.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGCTCCACAATCCCCACTaGTCCAAAGCAGCAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMLHNPH*SKAAMT Trigger: TGTCATTGCTGCTTTGGACAAGTGGGGATTGTGGAG...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGGAGGAAGAGGGATCCTaGCCACTATCAGATCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMEEEGS*PLSDQT Trigger: AGTTTGATCTGATAGTGGCAAGGATCCCTCTTCCTC...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGTTTGCTGTTTCATGGTaGTTTGATGGCAGCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMFAVSW*FDGSCT Trigger: GGTGCAGCTGCCATCAAACAACCATGAAACAGCAAA...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CAA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAAGGCACAAGAATCGCTaGAACCCGGGAGGAGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLRHKNR*NPGGGC Trigger: GCAACCTCCTCCCGGGTTCAAGCGATTCTTGTGCCT...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGCTGTTTCATGGTTGTTaGATGGCAGCTGCACCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMLFHGC*MAAAPL Trigger: TAAAGGTGCAGCTGCCATCAAACAACCATGAAACAG...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGATAAGCTCTGTTTATTaGACTAGCTGCCCAACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMISSVY*TSCPTS Trigger: GCTAGTTGGGCAGCTAGTCAAATAAACAGAGCTTAT...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGATTGCTCATCTTGATTaGGGTGTTCAACAATGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMIAHLD*GVQQCH Trigger: ATGGCATTGTTGAACACCCAAATCAAGATGAGCAAT...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CAA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTACCTTTAGGCATGCTGTaGGCCAGAAAGAGGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLPLGML*ARKRRK Trigger: CTTTCTCCTCTTTCTGGCCAACAGCATGCCTAAAGG...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCACATTTGCTGTTTCATGGTTGTTTGATGGCAGCTGCACCTTTAGGCATGCTTTCATTCTCACATTaGCTGTTTCATGGTTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSHLLFHGCLMAAAPLGMLSFSH*LFHGCL Trigger: CAAACAACCATGAAACAGCAAATGTGAGAATGAAAG...CATGCCTAAAGGTGCAGCTGCCATCAAACAACCATGAAACAGCAAATGTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS GCA 90 bp | CTTACTTCGACCTGCAAACTGATAAGCTCTGTTTATTTGACTAGCTaGCCAACTAGCATATTTCATGTTGTCCTTTTTCGTTTTTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LTSTCKLISSVYLTS*PTSIFHVVLFRFCT Trigger: AGTGCAAAAACGAAAAAGGACAACATGAAATATGCTAGTTGGGCAGCTAGTCAAATAAACAGAGCTTATCAGTTTGCAGGTCGAAGTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000220853.8 ENST00000519450.2 ENST00000520294.5 |
||
| CDS GCA 90 bp | CTCCAGACAGCCTGTACTCTTCAACCACTACATATGCTGCTTATATaGATTACACATCACATTGAAAAACTGAAGATGTCAATGGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: LQTACTLQPLHMLLI*ITHHIEKLKMSMVT Trigger: TGTTACCATTGACATCTTCAGTTTTTCAATGTGATGTGTAATGCATATAAGCAGCATATGTAGTGGTTGAAGAGTACAGGCTGTCTGGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000519450.2 |
||
| CDS-3UTR CAA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTATTCATGCCAGGCTTCTaGGTCTCCAACAAATTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLFMPGF*VSNKLF Trigger: GAACAATTTGTTGGAGACCAAGAAGCCTGGCATGAA...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CAA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAGTTTTCAAGTCCACCTaGGGTATACTTAACTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLVFKST*GILNFS Trigger: GCTGAAGTTAAGTATACCCAAGGTGGACTTGAAAAC...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS TCA 90 bp | CATATTTCTGTTGTTCAGTTTCAATGCCTGTGCAAAATACTTTCTTaGAAGTTCGAGGTTTTCAAGTCCACCTTGGGTATACTTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: HISVVQFQCLCKILS*KFEVFKSTLGILNF Trigger: GAAGTTAAGTATACCCAAGGTGGACTTGAAAACCTCGAACTTTCAAGAAAGTATTTTGCACAGGCATTGAAACTGAACAACAGAAATATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000220853.8 ENST00000519450.2 ENST00000520294.5 |
||
| CDS-3UTR CAA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTATTGGTCTCCAACAAATaGTTCCAGATACTCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLLVSNK*FQILIQ Trigger: CTGAATGAGTATCTGGAACAATTTGTTGGAGACCAA...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CAA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAGCTCTCATATTTCTGTaGTTCAGTTTCAATGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLALIFL*FSFNAC Trigger: ACAGGCATTGAAACTGAACAACAGAAATATGAGAGC...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CAA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAAGACAGAATGGATGGTaGATTTCCTTCACTGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLRQNGW*ISFTAK Trigger: TTTTGCAGTGAAGGAAATCAACCATCCATTCTGTCT...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS-3UTR CAA 90 bp | CTTCACTGCAAAAAGTTCTGCCTCGTACTAATCAGACTATACAGAATTAAACTAGCCTTAAGAGAATATTaGGTTTCCTTCTTACTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LHCKKFCLVLIRLYRIKLALREY*VSFLLR Trigger: TCGAAGTAAGAAGGAAACCAAATATTCTCTTAAGGC...TAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220853.8 |
||
| CDS TCA 72 bp | GCCTATGTGCCAGGCCTGATCTGGGCACTTCCCAAGTaGCATCGTAAAGCTCTGAGACCTTCGCCATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AYVPGLIWALPK*HRKALRPSPSS Trigger: GGAAGATGGCGAAGGTCTCAGAGCTTTACGATGTCACTTGGGAAGTGCCCAGATCAGGCCTGGCACATAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524143.5 |
||
| CDS GCA 72 bp | ACTGAGGCACAGAGATGTAAACTGAATCCCAGGCTGTaGCACTCCAGACAGCCTGTACTCTTCAACCACTAC | + |
|
Preference number: 6 (lower is better) Translates to: TEAQRCKLNPRL*HSRQPVLFNHY Trigger: GTAGTGGTTGAAGAGTACAGGCTGTCTGGAGTGGCACAGCCTGGGATTCAGTTTACATCTCTGTGCCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519450.2 |
||
| CDS CAA 72 bp | GACTCTGTGACTGCCAGGGAACTGTCTTCTCAGCTCTaGAAGACAAAACAATGCCAAGTCATCCCGACCATA | + |
|
Preference number: 6 (lower is better) Translates to: DSVTARELSSQL*KTKQCQVIPTI Trigger: TATGGTCGGGATGACTTGGCATTGTTTTGTCTTCAAGAGCTGAGAAGACAGTTCCCTGGCAGTCACAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000220853.8 ENST00000517593.5 ENST00000517784.5 ENST00000519642.1 ENST00000524143.5 |
||
| CDS TCA 72 bp | TTTCCATGGCTTCAAATCTCATGCCTGTTAATCGCTTaGCTCTGTGACTGCCAGGGAACTGTCTTCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FPWLQISCLLIA*LCDCQGTVFSA Trigger: AGCTGAGAAGACAGTTCCCTGGCAGTCACAGAGTCAAGCGATTAACAGGCATGAGATTTGAAGCCATGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000220853.8 ENST00000517593.5 ENST00000517784.5 ENST00000519642.1 ENST00000524143.5 |
||
| CDS TCA 72 bp | AGTCCACCTTGGGTATACTTAACTTCAGCATACTGCTaGCAGTATAAGTGGTTGTGTGGATTAGTCATCATT | + |
|
Preference number: 6 (lower is better) Translates to: SPPWVYLTSAYC*QYKWLCGLVII Trigger: AATGATGACTAATCCACACAACCACTTATACTGTCAGCAGTATGCTGAAGTTAAGTATACCCAAGGTGGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000220853.8 ENST00000519450.2 ENST00000520294.5 |
||
| CDS CAA 72 bp | ATTGATGTAAAGTTCTGCAAGTTCATGCCAGGCTTCTaGGTCTCCAACAAATTGTTCCAGATACTCATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: IDVKFCKFMPGF*VSNKLFQILIQ Trigger: CTGAATGAGTATCTGGAACAATTTGTTGGAGACCAAGAAGCCTGGCATGAACTTGCAGAACTTTACATCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000220853.8 ENST00000517784.5 ENST00000519642.1 ENST00000520294.5 |
||
| CDS GCA 72 bp | ACCTGCAAACTGATAAGCTCTGTTTATTTGACTAGCTaGCCAACTAGCATATTTCATGTTGTCCTTTTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: TCKLISSVYLTS*PTSIFHVVLFR Trigger: ACGAAAAAGGACAACATGAAATATGCTAGTTGGGCAGCTAGTCAAATAAACAGAGCTTATCAGTTTGCAGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000220853.8 ENST00000519450.2 ENST00000520294.5 |
||
| CDS CAA 72 bp | TGTTGTTCAGTTTCAATGCCTGTGCAAAATACTTTCTaGAAAGTTCGAGGTTTTCAAGTCCACCTTGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: CCSVSMPVQNTF*KVRGFQVHLGY Trigger: ATACCCAAGGTGGACTTGAAAACCTCGAACTTTCAAGAAAGTATTTTGCACAGGCATTGAAACTGAACAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000220853.8 ENST00000519450.2 ENST00000520294.5 |
||
| CDS CAA 72 bp | CACTACCCAACAAAAAGAGGCTACCTAAAGTTATTTTaGGCATTTACCAGTATACAAAGGGATCTACCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: HYPTKRGYLKLF*AFTSIQRDLPL Trigger: TAAAGGTAGATCCCTTTGTATACTGGTAAATGCCAAAAATAACTTTAGGTAGCCTCTTTTTGTTGGGTAGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000519450.2 |
||