RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EMC10 (Homo sapiens)

Ensembl gene IDs: ENSG00000161671

Ensembl transcript IDs: ENST00000334976.11, ENST00000376918.7, ENST00000594508.1, ENST00000597426.1, ENST00000598585.1, ENST00000599293.1, ENST00000601780.5

Found 720 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAACCTGGACCCGCCGGGTCTGGCAGCCTGTCCCCGCAGTAGCCTaGGCTGTGCCCACGACACCCCCGCCGCCCAGCTACCCGGCCCTC +
Preference number: 1 (lower is better)
Translates to: PTWTRRVWQPVPAVA*AVPTTPPPPSYPAL
Trigger: GAGGGCCGGGTAGCTGGGCGGCGGGGGTGTCGTGGGCACAGCCCAGGCTACTGCGGGGACAGGCTGCCAGACCCGGCGGGTCCAGGTTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 90 bp GACTCCAGCAGAAAGGGAGGCCCCTGGGTGTGCAAGACGGGACGCTaGCCAGCCTGGGCCCTCACCGGCCACTACCCCCACCACCACCCC +
Preference number: 1 (lower is better)
Translates to: DSSRKGGPWVCKTGR*PAWALTGHYPHHHP
Trigger: GGGGTGGTGGTGGGGGTAGTGGCCGGTGAGGGCCCAGGCTGGTCAGCGTCCCGTCTTGCACACCCAGGGGCCTCCCTTTCTGCTGGAGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR TCA 90 bp CAGGGCCTGGGGCTGTGGTGGGCGGCTGCAGCTGCACCGAGGTGTTaGACAGCTCCAGGTCCACGTCCTCCACCTCATGGCCCCGGCAGC +
Preference number: 1 (lower is better)
Translates to: QGLGLWWAAAAAPRC*TAPGPRPPPHGPGS
Trigger: GCTGCCGGGGCCATGAGGTGGAGGACGTGGACCTGGAGCTGTTCAACACCTCGGTGCAGCTGCAGCCGCCCACCACAGCCCCAGGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CCA 90 bp CGTTTCTGCTGCATGGCCGAGTTCCCAACCTGGACCCGCCGGGTCTaGCAGCCTGTCCCCGCAGTAGCCTGGGCTGTGCCCACGACACCC +
Preference number: 1 (lower is better)
Translates to: RFCCMAEFPTWTRRV*QPVPAVAWAVPTTP
Trigger: GGGTGTCGTGGGCACAGCCCAGGCTACTGCGGGGACAGGCTGCCAGACCCGGCGGGTCCAGGTTGGGAACTCGGCCATGCAGCAGAAACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp CCGGGGTGGCTGCGCCCTGTTGAGGCAGGGAACGTTTCTGCTGCATaGCCGAGTTCCCAACCTGGACCCGCCGGGTCTGGCAGCCTGTCC +
Preference number: 1 (lower is better)
Translates to: PGWLRPVEAGNVSAA*PSSQPGPAGSGSLS
Trigger: GGACAGGCTGCCAGACCCGGCGGGTCCAGGTTGGGAACTCGGCCATGCAGCAGAAACGTTCCCTGCCTCAACAGGGCGCAGCCACCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp TGCGTCACCACCGACACGCCCACCACGTTGCCGGCCACATCCACGTaGAGGGTCAGCTGGTCCGACAGGTGCGACTCCACCAGGGAGCAC +
Preference number: 1 (lower is better)
Translates to: CVTTDTPTTLPATST*RVSWSDRCDSTREH
Trigger: GTGCTCCCTGGTGGAGTCGCACCTGTCGGACCAGCTGACCCTGCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGTCGGTGGTGACGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CCA 90 bp GACATAGCCACCAGCTTCCAGGCCATCCAGGGCCCCGGGTCGCCTTaGGATCCGGACCCGGTACAGGCCATTCAGGGCTGCCACATCCCG +
Preference number: 1 (lower is better)
Translates to: DIATSFQAIQGPGSP*DPDPVQAIQGCHIP
Trigger: CGGGATGTGGCAGCCCTGAATGGCCTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCCTGGATGGCCTGGAAGCTGGTGGCTATGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR GCA 90 bp GGATGTCAGGGACTAGGCGGAGGGCATGTTCCTCCGAGCCCAGGCTaGACCTTGGCACAGTGGAGGGTCCACCCACCCCAGGTAGCCCAG +
Preference number: 1 (lower is better)
Translates to: GCQGLGGGHVPPSPG*TLAQWRVHPPQVAQ
Trigger: CTGGGCTACCTGGGGTGGGTGGACCCTCCACTGTGCCAAGGTGCAGCCTGGGCTCGGAGGAACATGCCCTCCGCCTAGTCCCTGACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp AGGGCTGCCACATCCCGGAGTCGGCCCCGCTCCTCCTCGCTGAGCTaGCGCTGTGACAGGGACAAGGTACCATCCTGCTGGTTCCAGAGC +
Preference number: 1 (lower is better)
Translates to: RAATSRSRPRSSSLS*RCDRDKVPSCWFQS
Trigger: GCTCTGGAACCAGCAGGATGGTACCTTGTCCCTGTCACAGCGGCAGCTCAGCGAGGAGGAGCGGGGCCGACTCCGGGATGTGGCAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CCA 90 bp CTGTCTCCTCTCCTGGCTCTCTCTCCTTCAAGCTCTCACTCCCACTaGCCTCCCTCCCGGGAGCCCCGTCTCCTCCGTCTCCAGGTGGCC +
Preference number: 1 (lower is better)
Translates to: LSPLLALSPSSSHSH*PPSREPRLLRLQVA
Trigger: GGCCACCTGGAGACGGAGGAGACGGGGCTCCCGGGAGGGAGGCCAGTGGGAGTGAGAGCTTGAAGGAGAGAGAGCCAGGAGAGGAGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp GACACGCCCACCACGTTGCCGGCCACATCCACGTGCAGGGTCAGCTaGTCCGACAGGTGCGACTCCACCAGGGAGCACGCAGGGACAAAG +
Preference number: 1 (lower is better)
Translates to: DTPTTLPATSTCRVS*SDRCDSTREHAGTK
Trigger: CTTTGTCCCTGCGTGCTCCCTGGTGGAGTCGCACCTGTCGGACCAGCTGACCCTGCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR TCA 90 bp CTCTCCCTGGGTCACAGAGATGGCCCCGGGGTGGCTGCGCCCTGTTaGGGCAGGGAACGTTTCTGCTGCATGGCCGAGTTCCCAACCTGG +
Preference number: 1 (lower is better)
Translates to: LSLGHRDGPGVAAPC*GRERFCCMAEFPTW
Trigger: CCAGGTTGGGAACTCGGCCATGCAGCAGAAACGTTCCCTGCCTCAACAGGGCGCAGCCACCCCGGGGCCATCTCTGTGACCCAGGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 90 bp CATTCAGGGCTGCCACATCCCGGAGTCGGCCCCGCTCCTCCTCGCTaGGCTGCCGCTGTGACAGGGACAAGGTACCATCCTGCTGGTTCC +
Preference number: 1 (lower is better)
Translates to: HSGLPHPGVGPAPPR*AAAVTGTRYHPAGS
Trigger: GGAACCAGCAGGATGGTACCTTGTCCCTGTCACAGCGGCAGCTCAGCGAGGAGGAGCGGGGCCGACTCCGGGATGTGGCAGCCCTGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR GCA 90 bp CCGTGCCTCACACTGGCTCCTAACCTGCTTCACGTTCCTGCTTCCTaGCCCGGTCTCTGGGCTGACGCTGTCTTAGGGGCGCCCCCTCCT +
Preference number: 1 (lower is better)
Translates to: PCLTLAPNLLHVPAS*PGLWADAVLGAPPP
Trigger: AGGAGGGGGCGCCCCTAAGACAGCGTCAGCCCAGAGACCGGGGCAGGAAGCAGGAACGTGAAGCAGGTTAGGAGCCAGTGTGAGGCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp TCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTaGCATAGTGGCCAGGATCTCGGGCTCTACTCCATGGGCAGGGGG +
Preference number: 1 (lower is better)
Translates to: SQTAWARGRGMRGQN*HSGQDLGLYSMGRG
Trigger: CCCCCTGCCCATGGAGTAGAGCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR GCA 90 bp GTTGTCCTTTCTCTCCCTGGGTCACAGAGATGGCCCCGGGGTGGCTaGGCCCTGTTGAGGCAGGGAACGTTTCTGCTGCATGGCCGAGTT +
Preference number: 1 (lower is better)
Translates to: VVLSLPGSQRWPRGG*ALLRQGTFLLHGRV
Trigger: AACTCGGCCATGCAGCAGAAACGTTCCCTGCCTCAACAGGGCGCAGCCACCCCGGGGCCATCTCTGTGACCCAGGGAGAGAAAGGACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp CACTGTCATCGATCTCAAATGAGTGCTCCAGCAGCAGCCCCACCGTaGCACAGGCCTCGCCCTCTCGACCTTCCGCCCCAGCCTAAAGAC +
Preference number: 1 (lower is better)
Translates to: HCHRSQMSAPAAAPP*HRPRPLDLPPQPKD
Trigger: GTCTTTAGGCTGGGGCGGAAGGTCGAGAGGGCGAGGCCTGTGGCACGGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGATGACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR GCA 90 bp TCCTCCTCGCTGAGCTGCCGCTGTGACAGGGACAAGGTACCATCCTaGTGGTTCCAGAGCAGTGAGCCCCGCTTCCGGAAGTTGGCACTG +
Preference number: 1 (lower is better)
Translates to: SSSLSCRCDRDKVPS*WFQSSEPRFRKLAL
Trigger: CAGTGCCAACTTCCGGAAGCGGGGCTCACTGCTCTGGAACCAGCAGGATGGTACCTTGTCCCTGTCACAGCGGCAGCTCAGCGAGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CCA 90 bp ATTCGTTGTCCTTTCTCTCCCTGGGTCACAGAGATGGCCCCGGGGTaGCTGCGCCCTGTTGAGGCAGGGAACGTTTCTGCTGCATGGCCG +
Preference number: 1 (lower is better)
Translates to: IRCPFSPWVTEMAPG*LRPVEAGNVSAAWP
Trigger: CGGCCATGCAGCAGAAACGTTCCCTGCCTCAACAGGGCGCAGCCACCCCGGGGCCATCTCTGTGACCCAGGGAGAGAAAGGACAACGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 90 bp AAAGTCCAGATGTCTCCGACCAACAGATCCCTGGGAGAAAGGACGTaGCGCTGCCGCTTCACCGGGATGGGTTCCCACGTCCCTCCGCGT +
Preference number: 1 (lower is better)
Translates to: KVQMSPTNRSLGERT*RCRFTGMGSHVPPR
Trigger: ACGCGGAGGGACGTGGGAACCCATCCCGGTGAAGCGGCAGCGTCACGTCCTTTCTCCCAGGGATCTGTTGGTCGGAGACATCTGGACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp AGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATaGGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCTCTACT +
Preference number: 1 (lower is better)
Translates to: RRRHVPRLHGLGVGG*EVRTGIVARISGST
Trigger: AGTAGAGCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CCA 90 bp AAAGGCACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATaGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGC +
Preference number: 1 (lower is better)
Translates to: KGTEAGEKAACSQTA*ARGRGMRGQNWHSG
Trigger: GCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGTGCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CCA 90 bp TTTCCTTCCCAGTTCCTAGCTCTCTCCTTTCTCTTTCCTCTTCTCTaGCTGGAGCTCCCCGCTCCTCCATCCCTCCCTCTCCCGGGGCCC +
Preference number: 1 (lower is better)
Translates to: FPSQFLALSFLFPLL*LELPAPPSLPLPGP
Trigger: GGGCCCCGGGAGAGGGAGGGATGGAGGAGCGGGGAGCTCCAGCCAGAGAAGAGGAAAGAGAAAGGAGAGAGCTAGGAACTGGGAAGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp CGTCTAGTCCCATTCGTTGTCCTTTCTCTCCCTGGGTCACAGAGATaGCCCCGGGGTGGCTGCGCCCTGTTGAGGCAGGGAACGTTTCTG +
Preference number: 1 (lower is better)
Translates to: RLVPFVVLSLPGSQR*PRGGCALLRQGTFL
Trigger: CAGAAACGTTCCCTGCCTCAACAGGGCGCAGCCACCCCGGGGCCATCTCTGTGACCCAGGGAGAGAAAGGACAACGAATGGGACTAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp TCCTCGCTGAGCTGCCGCTGTGACAGGGACAAGGTACCATCCTGCTaGTTCCAGAGCAGTGAGCCCCGCTTCCGGAAGTTGGCACTGTCA +
Preference number: 1 (lower is better)
Translates to: SSLSCRCDRDKVPSC*FQSSEPRFRKLALS
Trigger: TGACAGTGCCAACTTCCGGAAGCGGGGCTCACTGCTCTGGAACCAGCAGGATGGTACCTTGTCCCTGTCACAGCGGCAGCTCAGCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR TCA 90 bp CCAGCAACTGCTAAGACAGAGACTTCGAGGGAACCCGACCTTGCCTaGAGGACCAACAGCGCCCCCTGCAGGACACTTCCCTCCATTGAG +
Preference number: 1 (lower is better)
Translates to: PATAKTETSREPDLA*RTNSAPCRTLPSIE
Trigger: CTCAATGGAGGGAAGTGTCCTGCAGGGGGCGCTGTTGGTCCTTCAGGCAAGGTCGGGTTCCCTCGAAGTCTCTGTCTTAGCAGTTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp TTCCATCTGTCCGGAACTCTGGACACTGCCTGGAGGAATCAGGCCTaGCGTAGGCCCAGGAAGGCGGAAACAAAGACGACGCTCAGAGAC +
Preference number: 1 (lower is better)
Translates to: FHLSGTLDTAWRNQA*RRPRKAETKTTLRD
Trigger: GTCTCTGAGCGTCGTCTTTGTTTCCGCCTTCCTGGGCCTACGGCAGGCCTGATTCCTCCAGGCAGTGTCCAGAGTTCCGGACAGATGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp CGTCCCGCTGGCTCTTGCTCATTGTCTTTCCCTTCCCTGCTTGCCTaGTCCCTCACGCCCCTGCTCTGCGTGTTGGATGTGAAAAGGATG +
Preference number: 1 (lower is better)
Translates to: RPAGSCSLSFPSLLA*SLTPLLCVLDVKRM
Trigger: CATCCTTTTCACATCCAACACGCAGAGCAGGGGCGTGAGGGAGCAGGCAAGCAGGGAAGGGAAAGACAATGAGCAAGAGCCAGCGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp CAGGCGTTTCGTACTCTGCGTCTGATTTTCCAGCAGCGAAGCCTCTaGCATCCGCCCCACCGTCCCGCTGGCTCTTGCTCATTGTCTTTC +
Preference number: 1 (lower is better)
Translates to: QAFRTLRLIFQQRSL*HPPHRPAGSCSLSF
Trigger: GAAAGACAATGAGCAAGAGCCAGCGGGACGGTGGGGCGGATGGCAGAGGCTTCGCTGCTGGAAAATCAGACGCAGAGTACGAAACGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 90 bp CAGAGGACGAGGCTTGAGCTGGGACCAAGGCCATGGAGACAGAGGTaGCGGGATGAGGCCAGGAAGAACTTTAGGGGTAGGTATGGTGGT +
Preference number: 1 (lower is better)
Translates to: QRTRLELGPRPWRQR*RDEARKNFRGRYGG
Trigger: ACCACCATACCTACCCCTAAAGTTCTTCCTGGCCTCATCCCGTCACCTCTGTCTCCATGGCCTTGGTCCCAGCTCAAGCCTCGTCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 90 bp ATCTGCCGATCCCTGGCCTCCTATCTGAGCTCAGTGAGCAGCGGATaGCGCCTTTCTGCTCCATTCCGCTCCCTTCCCAACTCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: ICRSLASYLSSVSSG*RLSAPFRSLPNSSS
Trigger: AGAGGAAGAGTTGGGAAGGGAGCGGAATGGAGCAGAAAGGCGTCATCCGCTGCTCACTGAGCTCAGATAGGAGGCCAGGGATCGGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp CCTCCATTGAGAGAAGCCACAGGCGCCGGCCTGAGGCATTCTGAGTaGGTGGAATCCTCTATTACCACCTCCTGGCAAAGAACGGAGCTG +
Preference number: 1 (lower is better)
Translates to: PPLREATGAGLRHSE*VESSITTSWQRTEL
Trigger: CAGCTCCGTTCTTTGCCAGGAGGTGGTAATAGAGGATTCCACGCACTCAGAATGCCTCAGGCCGGCGCCTGTGGCTTCTCTCAATGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp CCCAGGATGATGTGCCAGTATTTGGCGAAGAAGGACTTCTGCTCCTaGGGGTTCTTGGCCTTCTGGGCCTGTTCCATCTCCAGGCGCTCA +
Preference number: 1 (lower is better)
Translates to: PRMMCQYLAKKDFCS*GFLAFWACSISRRS
Trigger: TGAGCGCCTGGAGATGGAACAGGCCCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGCCAAATACTGGCACATCATCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601780.5
3UTR TCA 90 bp CTTCCCTCCATTGAGAGAAGCCACAGGCGCCGGCCTGAGGCATTCTaGGTGCGTGGAATCCTCTATTACCACCTCCTGGCAAAGAACGGA +
Preference number: 1 (lower is better)
Translates to: LPSIERSHRRRPEAF*VRGILYYHLLAKNG
Trigger: TCCGTTCTTTGCCAGGAGGTGGTAATAGAGGATTCCACGCACTCAGAATGCCTCAGGCCGGCGCCTGTGGCTTCTCTCAATGGAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 90 bp CCAGGAAGAACTTTAGGGGTAGGTATGGTGGTGCATAGGAGAACGTaGTTGGGACAGGGCAGTGCTCTGGTCCATGAGGTTGGGCAGGTG +
Preference number: 1 (lower is better)
Translates to: PGRTLGVGMVVHRRT*LGQGSALVHEVGQV
Trigger: CACCTGCCCAACCTCATGGACCAGAGCACTGCCCTGTCCCAATCACGTTCTCCTATGCACCACCATACCTACCCCTAAAGTTCTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp TTTTCTCGCTGTCCTCTCTGTGGCCACCCTCCTTTTTCTCACTTCTaGTCTCCCTGTCCGGCTCTTCTCTCTCCTCTCTCCCTTCTAGCA +
Preference number: 1 (lower is better)
Translates to: FSRCPLCGHPPFSHF*SPCPALLSPLSLLA
Trigger: TGCTAGAAGGGAGAGAGGAGAGAGAAGAGCCGGACAGGGAGAGCAGAAGTGAGAAAAAGGAGGGTGGCCACAGAGAGGACAGCGAGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp GGAAGAGGAAGGCTTTCGCAATGCCACGCAGCCGATAACATTTTCTaGTGGCAGGAAATGGGAGGGAGCAACCCCTCCTGGAGCATTTAC +
Preference number: 1 (lower is better)
Translates to: GRGRLSQCHAADNIF*WQEMGGSNPSWSIY
Trigger: GTAAATGCTCCAGGAGGGGTTGCTCCCTCCCATTTCCTGCCACCAGAAAATGTTATCGGCTGCGTGGCATTGCGAAAGCCTTCCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp GGAATGATGTACATCCAGTATTTGGCGAAGAAGGACTTCTGCTCCTaGGGGTTCTTGGCCTTCTGGGCCTGTTCCATCTCCAGGCGCTCA +
Preference number: 1 (lower is better)
Translates to: GMMYIQYLAKKDFCS*GFLAFWACSISRRS
Trigger: TGAGCGCCTGGAGATGGAACAGGCCCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGCCAAATACTGGATGTACATCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599293.1
3UTR TCA 90 bp GATGGGAGGGAAGGCAACCTCCCACGGTGCACCACCTCCTGGTCTTaGCAGTCGACTCACAAACCATCACTTGTTTATAAACGCGTTTCC +
Preference number: 1 (lower is better)
Translates to: DGREGNLPRCTTSWS*QSTHKPSLVYKRVS
Trigger: GGAAACGCGTTTATAAACAAGTGATGGTTTGTGAGTCGACTGTCAAGACCAGGAGGTGGTGCACCGTGGGAGGTTGCCTTCCCTCCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp AGAGGAAGGCTTTCGCAATGCCACGCAGCCGATAACATTTTCTGGTaGCAGGAAATGGGAGGGAGCAACCCCTCCTGGAGCATTTACCTT +
Preference number: 1 (lower is better)
Translates to: RGRLSQCHAADNIFW*QEMGGSNPSWSIYL
Trigger: AAGGTAAATGCTCCAGGAGGGGTTGCTCCCTCCCATTTCCTGCCACCAGAAAATGTTATCGGCTGCGTGGCATTGCGAAAGCCTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp GGCCTGAGGCATTCTGAGTGCGTGGAATCCTCTATTACCACCTCCTaGCAAAGAACGGAGCTGCAACCCAGCTATATGAGACACCGAGAA +
Preference number: 1 (lower is better)
Translates to: GLRHSECVESSITTS*QRTELQPSYMRHRE
Trigger: TTCTCGGTGTCTCATATAGCTGGGTTGCAGCTCCGTTCTTTGCCAGGAGGTGGTAATAGAGGATTCCACGCACTCAGAATGCCTCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp CCCAGCCACTATCCTCTCTCTTCACCCTCTTCTCTTTCTGTCTCATaGTCTCCTCCTAGCTCTTTTCCTTCCCAGTTCCTAGCTCTCTCC +
Preference number: 1 (lower is better)
Translates to: PSHYPLSSPSSLSVS*SPPSSFPSQFLALS
Trigger: GGAGAGAGCTAGGAACTGGGAAGGAAAAGAGCTAGGAGGAGACCATGAGACAGAAAGAGAAGAGGGTGAAGAGAGAGGATAGTGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 90 bp TTTCTGCTCCATTCCGCTCCCTTCCCAACTCTTCCTCTGACAACATaGAGCACCTCAGCACTGAGGGGACCTCACCTGAATTCCATTTCA +
Preference number: 1 (lower is better)
Translates to: FLLHSAPFPTLPLTT*STSALRGPHLNSIS
Trigger: TGAAATGGAATTCAGGTGAGGTCCCCTCAGTGCTGAGGTGCTTCATGTTGTCAGAGGAAGAGTTGGGAAGGGAGCGGAATGGAGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp GATAACATTTTCTGGTGGCAGGAAATGGGAGGGAGCAACCCCTCCTaGAGCATTTACCTTGCCAGGTGCTCTCACATCTTAGACCAGAAG +
Preference number: 1 (lower is better)
Translates to: DNIFWWQEMGGSNPS*SIYLARCSHILDQK
Trigger: CTTCTGGTCTAAGATGTGAGAGCACCTGGCAAGGTAAATGCTCCAGGAGGGGTTGCTCCCTCCCATTTCCTGCCACCAGAAAATGTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 90 bp TGGCAAAGAACGGAGCTGCAACCCAGCTATATGAGACACCGAGAATaGTCTCAACAAAAAGGAACAGTGACCAGAATGCCTGGGGGAGGA +
Preference number: 1 (lower is better)
Translates to: WQRTELQPSYMRHRE*SQQKGTVTRMPGGG
Trigger: TCCTCCCCCAGGCATTCTGGTCACTGTTCCTTTTTGTTGAGATCATTCTCGGTGTCTCATATAGCTGGGTTGCAGCTCCGTTCTTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp GACTGGACGACAGCACTCACTAGGGTGCTATTTATAACCATACAATaGAGGAGGCTAGCTGCGTGTCGATCTGGGGGACAGTTTAATAAA +
Preference number: 1 (lower is better)
Translates to: DWTTALTRVLFITIQ*RRLAACRSGGQFNK
Trigger: TTTATTAAACTGTCCCCCAGATCGACACGCAGCTAGCCTCCTGCATTGTATGGTTATAAATAGCACCCTAGTGAGTGCTGTCGTCCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp GGGTGGGTGGATTGGCTCCCATGGAAATGCAACTGGGACTGCACATaGGAAACAAAGGAAAATGGAATTTGGTTCACACAAACCTGTTTG +
Preference number: 1 (lower is better)
Translates to: GWVDWLPWKCNWDCT*ETKENGIWFTQTCL
Trigger: CAAACAGGTTTGTGTGAACCAAATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCATGGGAGCCAATCCACCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp TTCTATGGGTGGGTGGATTGGCTCCCATGGAAATGCAACTGGGACTaGACATGGGAAACAAAGGAAAATGGAATTTGGTTCACACAAACC +
Preference number: 1 (lower is better)
Translates to: FYGWVDWLPWKCNWD*TWETKENGIWFTQT
Trigger: GGTTTGTGTGAACCAAATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCATGGGAGCCAATCCACCCACCCATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp TTAGTCATGCATCCCGAGATCATTCAAACCACACCCAAGAGAGACTaGACGACAGCACTCACTAGGGTGCTATTTATAACCATACAATGC +
Preference number: 1 (lower is better)
Translates to: LVMHPEIIQTTPKRD*TTALTRVLFITIQC
Trigger: GCATTGTATGGTTATAAATAGCACCCTAGTGAGTGCTGTCGTCCAGTCTCTCTTGGGTGTGGTTTGAATGATCTCGGGATGCATGACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp AAGTCATTCTATGGGTGGGTGGATTGGCTCCCATGGAAATGCAACTaGGACTGCACATGGGAAACAAAGGAAAATGGAATTTGGTTCACA +
Preference number: 1 (lower is better)
Translates to: KSFYGWVDWLPWKCN*DCTWETKENGIWFT
Trigger: TGTGAACCAAATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCATGGGAGCCAATCCACCCACCCATAGAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 90 bp TCACACATTTTCAAGTCATTCTATGGGTGGGTGGATTGGCTCCCATaGAAATGCAACTGGGACTGCACATGGGAAACAAAGGAAAATGGA +
Preference number: 1 (lower is better)
Translates to: SHIFKSFYGWVDWLP*KCNWDCTWETKENG
Trigger: TCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCATGGGAGCCAATCCACCCACCCATAGAATGACTTGAAAATGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp ATTTTCAAGTCATTCTATGGGTGGGTGGATTGGCTCCCATGGAAATaGAACTGGGACTGCACATGGGAAACAAAGGAAAATGGAATTTGG +
Preference number: 1 (lower is better)
Translates to: IFKSFYGWVDWLPWK*NWDCTWETKENGIW
Trigger: CCAAATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCATGGGAGCCAATCCACCCACCCATAGAATGACTTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 90 bp GGACAGCCATTCCTTGGGTTTCTGAATAACGTATCAAGTGAGCAGTaGATTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACA +
Preference number: 1 (lower is better)
Translates to: GQPFLGFLNNVSSEQ*ISIKLVHQDRLAKT
Trigger: TGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAATTCACTGCTCACTTGATACGTTATTCAGAAACCCAAGGAATGGCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CCA 90 bp AAATGCAACTGGGACTGCACATGGGAAACAAAGGAAAATGGAATTTaGTTCACACAAACCTGTTTGGGAGATTGCATTTCCAGGAAATGG +
Preference number: 1 (lower is better)
Translates to: KCNWDCTWETKENGI*FTQTCLGDCISRKW
Trigger: CCATTTCCTGGAAATGCAATCTCCCAAACAGGTTTGTGTGAACCAAATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 90 bp AGTCGACTCACAAACCATCACTTGTTTATAAACGCGTTTCCGATCTaGCATCGTAATTCCATTTTAGTCATGCATCCCGAGATCATTCAA +
Preference number: 1 (lower is better)
Translates to: SRLTNHHLFINAFPI*HRNSILVMHPEIIQ
Trigger: TTGAATGATCTCGGGATGCATGACTAAAATGGAATTACGATGGCAGATCGGAAACGCGTTTATAAACAAGTGATGGTTTGTGAGTCGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR GCA 90 bp GGCTGCACTAGGCGTCGGGCCCAGAAGCCCCCGGCCATCCAGCCCCGACTCTTTCACGACCCCAGGGGCTaGACTAGGCGTCGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: GCTRRRAQKPPAIQPRLFHDPRG*TRRRAQ
Trigger: CTGGGCCCGACGCCTAGTGCAGCCCCTGGGGTCGTG...AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGACGCCTAGTGCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp CGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCAAGACGGGACGCTaGCCAGCCTGGGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: RAQETPAAVPKAPVQLLLCKTGR*PAWALT
Trigger: GGTGAGGGCCCAGGCTGGTCAGCGTCCCGTCTTGCA...GAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp CAGCCCCCGGGGTGCGTCACCACCGACACGCCCACCACGTTGCCGGCCACATCCAGACACCGGCTGCTGTaGCAAAGGCCCCAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: QPPGCVTTDTPTTLPATSRHRLL*QRPQSS
Trigger: GCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCT...GGATGTGGCCGGCAACGTGGTGGGCGTGTCGGTGGTGACGCACCCCGGGGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp GGAGACATAGCCACCAGCTTCCAGGCCATCCAGGGCCCCGGGTCGCCTTGGGATGCAGCAGCCCCACCGTaGCACAGGCCTCGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: GDIATSFQAIQGPGSPWDAAAPP*HRPRPL
Trigger: GAGAGGGCGAGGCCTGTGGCACGGTGGGGCTGCTGC...ATCCCAAGGCGACCCGGGGCCCTGGATGGCCTGGAAGCTGGTGGCTATGTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp GGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCAGAGGACAAGGGGCTaGCCCAGGTGGCCTCGTGGG +
Preference number: 2 (lower is better)
Translates to: GAGDTGCCAKGPSPAAPLQRTRG*PRWPRG
Trigger: CCCACGAGGCCACCTGGGCCAGCCCCTTGTCCTCTG...CAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CAA 90 bp CAGGGACTAGGCGGAGGGCATGTTCCTCCGAGCCCAGGCTGCACCTaGGCACAGTGGAGGGTCCACCCACCCCAGGTAGCCCAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: QGLGGGHVPPSPGCT*AQWRVHPPQVAQVR
Trigger: CCTCACCTGGGCTACCTGGGGTGGGTGGACCCTCCACTGTGCCAAGGTGCAGCCTGGGCTCGGAGGAACATGCCCTCCGCCTAGTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR TCA 90 bp GGCAGCCCCCGGGGTGCGTCACCACCGACACGCCCACCACGTTGCCGGCCACATGCGCTCCTGACATCATaGGGAACAGGACGACGGGAA +
Preference number: 2 (lower is better)
Translates to: GSPRGASPPTRPPRCRPHALLTS*GTGRRE
Trigger: TTCCCGTCGTCCTGTTCCTCATGATGTCAGGAGCGC...ATGTGGCCGGCAACGTGGTGGGCGTGTCGGTGGTGACGCACCCCGGGGGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGCCCGCTCCTCCTCGCTaGGCTGCCGCTGTGACAGGG +
Preference number: 2 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWPAPPR*AAAVTG
Trigger: CCCTGTCACAGCGGCAGCTCAGCGAGGAGGAGCGGG...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp GGCTGCACTAGGCGTCGGGCCCAGAAGCCCCCGGCCATCCAGCCCCGACTCTTTAGAAAGGGAGGCCCCTaGGTGTGCAAGACGGGACGC +
Preference number: 2 (lower is better)
Translates to: GCTRRRAQKPPAIQPRLFRKGGP*VCKTGR
Trigger: GCGTCCCGTCTTGCACACCCAGGGGCCTCCCTTTCT...AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGACGCCTAGTGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGGGCCCCGGGTCGCCTTaGGATCCGGACCCGGTACAG +
Preference number: 2 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWGPGSP*DPDPVQ
Trigger: CTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCC...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CAA 90 bp AGACATAGCCACCAGCTTCCAGGCCATCCAGGGCCCCGGGTCGCCTaGGGATCCGGACCCGGTACAGGCCATTCAGGGCTGCCACATCCC +
Preference number: 2 (lower is better)
Translates to: RHSHQLPGHPGPRVA*GSGPGTGHSGLPHP
Trigger: GGGATGTGGCAGCCCTGAATGGCCTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCCTGGATGGCCTGGAAGCTGGTGGCTATGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp ACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGCACGACCCCAGGGGCTaGACTAGGCGTCGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: TEAGEKAACSQTAWARGRHDPRG*TRRRAQ
Trigger: CTGGGCCCGACGCCTAGTGCAGCCCCTGGGGTCGTG...CCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp GGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGGTGGGCGGCTGCAGCTaGACCGAGGTGTTGAACAGC +
Preference number: 2 (lower is better)
Translates to: GAGDTGCCAKGPSPAAPLVGGCS*TEVLNS
Trigger: GCTGTTCAACACCTCGGTGCAGCTGCAGCCGCCCAC...CAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp GGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGAGAAAGGGAGGCCCCTaGGTGTGCAAGACGGGACGC +
Preference number: 2 (lower is better)
Translates to: GAGDTGCCAKGPSPAAPLRKGGP*VCKTGR
Trigger: GCGTCCCGTCTTGCACACCCAGGGGCCTCCCTTTCT...CAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGAGAAAGGGAGGCCCCTaGGTGTGCAAGACGGGACGC +
Preference number: 2 (lower is better)
Translates to: EAGEKAACSQTAWARGRGRKGGP*VCKTGR
Trigger: GCGTCCCGTCTTGCACACCCAGGGGCCTCCCTTTCT...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CAA 90 bp TCTCTCCCTGGGTCACAGAGATGGCCCCGGGGTGGCTGCGCCCTGTaGAGGCAGGGAACGTTTCTGCTGCATGGCCGAGTTCCCAACCTG +
Preference number: 2 (lower is better)
Translates to: SLPGSQRWPRGGCAL*RQGTFLLHGRVPNL
Trigger: CAGGTTGGGAACTCGGCCATGCAGCAGAAACGTTCCCTGCCTCAACAGGGCGCAGCCACCCCGGGGCCATCTCTGTGACCCAGGGAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR TCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGGCTGAGCTGCCGCTGTaGCAGGGACAAGGTACCATC +
Preference number: 2 (lower is better)
Translates to: EAGEKAACSQTAWARGRGAELPL*QGQGTI
Trigger: GATGGTACCTTGTCCCTGTCACAGCGGCAGCTCAGC...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTATGTTCCCAGACTGCATaGGCTCGGGGTAGGGGGATG +
Preference number: 2 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVCSQTA*ARGRGM
Trigger: CATCCCCCTACCCCGAGCCCATGCAGTCTGGGAACA...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp GGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCGCGCTCCTGACATCATaGGGAACAGGACGACGGGAA +
Preference number: 2 (lower is better)
Translates to: GTQQRPAGPRSTAVQVGCALLTS*GTGRRE
Trigger: TTCCCGTCGTCCTGTTCCTCATGATGTCAGGAGCGC...GCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp GGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCGGTGTCTGGCGCTCCTaGCATCATGAGGAACAGGAC +
Preference number: 2 (lower is better)
Translates to: GTQQRPAGPRSTAVQVGCGVWRS*HHEEQD
Trigger: GTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACC...GCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTGCAGCAGCCCCACCGTaGCACAGGCCTCGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRAAAPP*HRPRPL
Trigger: GAGAGGGCGAGGCCTGTGGCACGGTGGGGCTGCTGC...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp CTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCTGTTCCCAGACTGCATaGGCTCGGGGTAGGGGGATG +
Preference number: 2 (lower is better)
Translates to: LGVGGCEVRTGIVARISGCSQTA*ARGRGM
Trigger: CATCCCCCTACCCCGAGCCCATGCAGTCTGGGAACA...GCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CAA 90 bp TTGCCTGAAGGACCAACAGCGCCCCCTGCAGGACACTTCCCTCCATaGAGAGAAGCCACAGGCGCCGGCCTGAGGCATTCTGAGTGCGTG +
Preference number: 2 (lower is better)
Translates to: LPEGPTAPPAGHFPP*REATGAGLRHSECV
Trigger: CACGCACTCAGAATGCCTCAGGCCGGCGCCTGTGGCTTCTCTCAATGGAGGGAAGTGTCCTGCAGGGGGCGCTGTTGGTCCTTCAGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR TCA 90 bp GCACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTACCAGGGACAGGAGGGTaGGACCACCTGGAACAAAGG +
Preference number: 2 (lower is better)
Translates to: AQRLERRRHVPRLHGLGVPGTGG*DHLEQR
Trigger: CCTTTGTTCCAGGTGGTCTCACCCTCCTGTCCCTGG...TACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp CATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCCTGGTTCCAGAGCAGTaGGCCCCGCTTCCGGAAGTT +
Preference number: 2 (lower is better)
Translates to: HGLGVGGCEVRTGIVARILVPEQ*APLPEV
Trigger: AACTTCCGGAAGCGGGGCTCACTGCTCTGGAACCAG...GATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp CTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGGGGTTCTTGGCCTTCTaGGCCTGTTCCATCTCCAGG +
Preference number: 2 (lower is better)
Translates to: LHGLGVGGCEVRTGIVARGFLAF*ACSISR
Trigger: CCTGGAGATGGAACAGGCCCAGAAGGCCAAGAACCC...CCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp CTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGGTCATCGATCTCAAATaGGTGCTCCAGCAGCAGCCC +
Preference number: 2 (lower is better)
Translates to: LHGLGVGGCEVRTGIVARVIDLK*VLQQQP
Trigger: GGGCTGCTGCTGGAGCACTCATTTGAGATCGATGAC...CCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp GCACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGCGAAGAAGGACTTCTaGTCCTGGGGGTTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: AQRLERRRHVPRLHGLGVAKKDF*SWGFLA
Trigger: GGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGC...TACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGACTTACAGGGAGGGTaGCACACAGCAAAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGIDLQGG*HTAKAR
Trigger: GCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTC...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp GTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCTCTACTCTGGTTCCAGAGCAGTaGGCCCCGCTTCCGGAAGTT +
Preference number: 2 (lower is better)
Translates to: VGGCEVRTGIVARISGSTLVPEQ*APLPEV
Trigger: AACTTCCGGAAGCGGGGCTCACTGCTCTGGAACCAG...AGTAGAGCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCCGGCCACATCCACGTaGAGGGTCAGCTGGTCCGAC +
Preference number: 2 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLPATST*RVSWSD
Trigger: GTCGGACCAGCTGACCCTGCACGTGGATGTGGCCGG...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp TCCAGTATTTGGCGAAGAAGGACTTCTGCTCCTGGGGGTTCTTGGCCTTCTGGGGCTGTGGTGGGCGGCTaGAGCTGCACCGAGGTGTTG +
Preference number: 2 (lower is better)
Translates to: SSIWRRRTSAPGGSWPSGAVVGG*SCTEVL
Trigger: CAACACCTCGGTGCAGCTGCAGCCGCCCACCACAGC...CCCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGCCAAATACTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599293.1
3UTR CAA 90 bp GAAGACCAGCAACTGCTAAGACAGAGACTTCGAGGGAACCCGACCTaGCCTGAAGGACCAACAGCGCCCCCTGCAGGACACTTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: EDQQLLRQRLRGNPT*PEGPTAPPAGHFPP
Trigger: TGGAGGGAAGTGTCCTGCAGGGGGCGCTGTTGGTCCTTCAGGCAAGGTCGGGTTCCCTCGAAGTCTCTGTCTTAGCAGTTGCTGGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR GCA 90 bp TGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACCAGGCCATTCAGGGCTaGCACATCCCGGAGTCGGCC +
Preference number: 2 (lower is better)
Translates to: CGGPVTLKARIPCLHQADQAIQG*HIPESA
Trigger: GGCCGACTCCGGGATGTGGCAGCCCTGAATGGCCTG...GTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGACACGCCCACCACGTTaGCGGCCACATCCACGTGCA +
Preference number: 2 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLTRPPR*RPHPRA
Trigger: TGCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGT...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp TCGTTGTCCTTTCTCTCCCTGGGTCACAGAGATGGCCCCGGGGTGGCTGCGCCCACCAGGACTCCAAGTTaGGAACACTTCCCAAAAAGC +
Preference number: 2 (lower is better)
Translates to: SLSFLSLGHRDGPGVAAPTRTPS*EHFPKS
Trigger: GCTTTTTGGGAAGTGTTCCCAACTTGGAGTCCTGGT...GGGCGCAGCCACCCCGGGGCCATCTCTGTGACCCAGGGAGAGAAAGGACAACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CCA 90 bp AAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGGCGCCGTCTCAGGGCCTaGGGCTGTGGTGGGCGGCTG +
Preference number: 2 (lower is better)
Translates to: KLVHQDRLAKTTVAFGCWRRLRA*GCGGRL
Trigger: CAGCCGCCCACCACAGCCCCAGGCCCTGAGACGGCG...CCAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp GGAAGTTGGCACTGTCATCGATCTCAAATGAGTGCTCCAGCAGCAGCCCCACCGGGTGTCTGGCGCTCCTaGCATCATGAGGAACAGGAC +
Preference number: 2 (lower is better)
Translates to: GSWHCHRSQMSAPAAAPPGVWRS*HHEEQD
Trigger: GTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACC...CGGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGATGACAGTGCCAACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp GTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCTCTACTTCGATCTCAAATGAGTaGTCCAGCAGCAGCCCCACC +
Preference number: 2 (lower is better)
Translates to: VGGCEVRTGIVARISGSTSISNE*SSSSPT
Trigger: GGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGA...AGTAGAGCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp TGCCAGTATTTGGCGAAGAAGGACTTCTGCTCCTGGGGGTTCTTGGCCTTCTGGTCCTCCTCGCTGAGCTaGCGCTGTGACAGGGACAAG +
Preference number: 2 (lower is better)
Translates to: CQYLAKKDFCSWGFLAFWSSSLS*RCDRDK
Trigger: CTTGTCCCTGTCACAGCGGCAGCTCAGCGAGGAGGA...CCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGCCAAATACTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601780.5
3UTR-3UTR CCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCAGAAAGGGAGGCCCCTaGGTGTGCAAGACGGGACGC +
Preference number: 2 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALRKGGP*VCKTGR
Trigger: GCGTCCCGTCTTGCACACCCAGGGGCCTCCCTTTCT...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp ACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGAAGTCTGGAAGCCTGTaGAGGGCCTGTCACCTTAAA +
Preference number: 2 (lower is better)
Translates to: TEAGEKAACSQTAWARGRKSGSL*RACHLK
Trigger: TTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT...CCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATACCCGCTTCCGGAAGTTaGCACTGTCATCGATCTCAA +
Preference number: 2 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGIPASGS*HCHRSQ
Trigger: TTGAGATCGATGACAGTGCCAACTTCCGGAAGCGGG...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CAA 90 bp ATGTGCCAGTATTTGGCGAAGAAGGACTTCTGCTCCTGGGGGTTCTaGGCCTTCTGGGCCTGTTCCATCTCCAGGCGCTCAATGAAGGCC +
Preference number: 2 (lower is better)
Translates to: MCQYLAKKDFCSWGF*AFWACSISRRSMKA
Trigger: GGCCTTCATTGAGCGCCTGGAGATGGAACAGGCCCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGCCAAATACTGGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601780.5
3UTR-3UTR TCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGCATTCCTTGGGTTTCTaGATAACGTATCAAGTGAGC +
Preference number: 2 (lower is better)
Translates to: EAGEKAACSQTAWARGRGHSLGF*ITYQVS
Trigger: GCTCACTTGATACGTTATTCAGAAACCCAAGGAATG...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGGCGCTCCTGACATCATaGGGAACAGGACGACGGGAA +
Preference number: 2 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLALLTS*GTGRRE
Trigger: TTCCCGTCGTCCTGTTCCTCATGATGTCAGGAGCGC...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGGGTGTCTGGCGCTCCTaGCATCATGAGGAACAGGAC +
Preference number: 2 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLGVWRS*HHEEQD
Trigger: GTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACC...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp CAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGTGCAAGACGGGACGCTaGCCAGCCTGGGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: QACTSGPSCQNNSCFWLLCKTGR*PAWALT
Trigger: GGTGAGGGCCCAGGCTGGTCAGCGTCCCGTCTTGCA...CAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp GGGTGGTGGAGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTAGACACCGGCTGCTGTaGCAAAGGCCCCAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: GWWRGFYLQCLGFDSTNCRHRLL*QRPQSS
Trigger: GCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCT...ACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCTCCACCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGCAGGCCATTCAGGGCTaGCACATCCCGGAGTCGGCC +
Preference number: 2 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMQAIQG*HIPESA
Trigger: GGCCGACTCCGGGATGTGGCAGCCCTGAATGGCCTG...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp CTCTCCTACCCTCCTTCCCTCCCTCTTTCTCTCTCCCCCTCCGCACCGCTCCATAGCCTCCCAAACAGCTaGGACTACAAGCATGAATCA +
Preference number: 2 (lower is better)
Translates to: LSYPPSLPLSLSPSAPLHSLPNS*DYKHES
Trigger: TGATTCATGCTTGTAGTCCCAGCTGTTTGGGAGGCT...ATGGAGCGGTGCGGAGGGGGAGAGAGAAAGAGGGAGGGAAGGAGGGTAGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CAA 90 bp GAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTaGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCA +
Preference number: 2 (lower is better)
Translates to: EACGGPVTLKARIPC*HQADKCQTTTPGAA
Trigger: TGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
3UTR CAA 90 bp TCTGGAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTaGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: SGSLWRACHLKGKDS*FAPGRQMSNHDPRG
Trigger: GCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
3UTR CAA 90 bp TACATCCAGTATTTGGCGAAGAAGGACTTCTGCTCCTGGGGGTTCTaGGCCTTCTGGGCCTGTTCCATCTCCAGGCGCTCAATGAAGGCC +
Preference number: 2 (lower is better)
Translates to: YIQYLAKKDFCSWGF*AFWACSISRRSMKA
Trigger: GGCCTTCATTGAGCGCCTGGAGATGGAACAGGCCCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGCCAAATACTGGATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599293.1
3UTR-3UTR TCA 90 bp TGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCCCGCTCCTCCTCGCTaGGCTGCCGCTGTGACAGGG +
Preference number: 2 (lower is better)
Translates to: CHLKGKDSLFAPGRQMSNPAPPR*AAAVTG
Trigger: CCCTGTCACAGCGGCAGCTCAGCGAGGAGGAGCGGG...GTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp GAGACACCGAGAATGATCTCAACAAAAAGGAACAGTGACCAGAATGCCTGGGGGGCAGGAGACACCGGCTaGTGTGCCAAAGGCCCCAGT +
Preference number: 2 (lower is better)
Translates to: ETPRMISTKRNSDQNAWGAGDTG*CAKGPS
Trigger: ACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGC...CCCCCAGGCATTCTGGTCACTGTTCCTTTTTGTTGAGATCATTCTCGGTGTCTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR GCA 90 bp CTCTCCTACCCTCCTTCCCTCCCTCTTTCTCTCTCCCCCTCCGCACCGCTCCATATTTACCTTGCCAGGTaGTCTCACATCTTAGACCAG +
Preference number: 2 (lower is better)
Translates to: LSYPPSLPLSLSPSAPLHIYLAR*SHILDQ
Trigger: CTGGTCTAAGATGTGAGAGCACCTGGCAAGGTAAAT...ATGGAGCGGTGCGGAGGGGGAGAGAGAAAGAGGGAGGGAAGGAGGGTAGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCAAAGGCACAGAGGCTaGAGAGAAGGCGGCATGTTC +
Preference number: 2 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLQRHRG*REGGMF
Trigger: GAACATGCCGCCTTCTCTCCAGCCTCTGTGCCTTTG...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CAA 90 bp CCAGGAAGGCGGAAACAAAGACGACGCTCAGAGACAGGAAGCAACTaGCCTAAAGATACACAGCACGTAAGGAGCAGGGACAGGACTGGG +
Preference number: 2 (lower is better)
Translates to: PGRRKQRRRSETGSN*PKDTQHVRSRDRTG
Trigger: CCCAGTCCTGTCCCTGCTCCTTACGTGCTGTGTATCTTTAGGCAAGTTGCTTCCTGTCTCTGAGCGTCGTCTTTGTTTCCGCCTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CCA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGCGCCGTCTCAGGGCCTaGGGCTGTGGTGGGCGGCTG +
Preference number: 2 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLRRLRA*GCGGRL
Trigger: CAGCCGCCCACCACAGCCCCAGGCCCTGAGACGGCG...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp TGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACTCTCCAGGCGCTCAATaGAGGCCGCCGTCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: CHLKGKDSLFAPGRQMSNSPGAQ*RPPSQG
Trigger: GCCCTGAGACGGCGGCCTTCATTGAGCGCCTGGAGA...GTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp CAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGTCCTCCTCGCTGAGCTaGCGCTGTGACAGGGACAAG +
Preference number: 2 (lower is better)
Translates to: QACTSGPSCQNNSCFWLLSSSLS*RCDRDK
Trigger: CTTGTCCCTGTCACAGCGGCAGCTCAGCGAGGAGGA...CAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGAAGTCTGGAAGCCTGTaGAGGGCCTGTCACCTTAAA +
Preference number: 2 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLKSGSL*RACHLK
Trigger: TTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp GCACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTATCTATTTACAGTGTCTaGGCTTTGACTCCACTAACT +
Preference number: 2 (lower is better)
Translates to: AQRLERRRHVPRLHGLGVSIYSV*ALTPLT
Trigger: AGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGA...TACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp GAGACACCGAGAATGATCTCAACAAAAAGGAACAGTGACCAGAATGCCTGGGGGGGGAGCAACCCCTCCTaGAGCATTTACCTTGCCAGG +
Preference number: 2 (lower is better)
Translates to: ETPRMISTKRNSDQNAWGGSNPS*SIYLAR
Trigger: CCTGGCAAGGTAAATGCTCCAGGAGGGGTTGCTCCC...CCCCCAGGCATTCTGGTCACTGTTCCTTTTTGTTGAGATCATTCTCGGTGTCTC
53% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CCA 90 bp AAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGGGCTCCTGGGGGTTCTTaGCCTTCTGGGCCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: KLVHQDRLAKTTVAFGCWAPGGS*PSGPVP
Trigger: TGGAACAGGCCCAGAAGGCCAAGAACCCCCAGGAGC...CCAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp GTTTCTGGACGTGGATTCCACTGCATCTTTTGTCTATTCTGGAGACAGGGTCTCGCCACACAACACAGCTaGGCTCCACACAGCCACATG +
Preference number: 2 (lower is better)
Translates to: VSGRGFHCIFCLFWRQGLATQHS*APHSHM
Trigger: CATGTGGCTGTGTGGAGCTCAGCTGTGTTGTGTGGC...GAGACCCTGTCTCCAGAATAGACAAAAGATGCAGTGGAATCCACGTCCAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR TCA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGTGCAAGACGGGACGCTaGCCAGCCTGGGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLCKTGR*PAWALT
Trigger: GGTGAGGGCCCAGGCTGGTCAGCGTCCCGTCTTGCA...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp AGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTTGGTTTTGTAGACACCGGCTGCTGTaGCAAAGGCCCCAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: RGFYLQCLGFDSTNCWFCRHRLL*QRPQSS
Trigger: GCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCT...ACAAAACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp TCGTCGATGTTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGTCGATCTCAAATGAGTaGTCCAGCAGCAGCCCCACC +
Preference number: 2 (lower is better)
Translates to: SSMFLNRLTGRVAHSKGPSISNE*SSSSPT
Trigger: GGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGA...CGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAACATCGACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp TGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAGTCTGGAAGCCTGTaGAGGGCCTGTCACCTTAAA +
Preference number: 2 (lower is better)
Translates to: CGGPVTLKARIPCLHQADKSGSL*RACHLK
Trigger: TTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT...GTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGACCACCTCCTGGTCTTaGCAGTCGACTCACAAACCA +
Preference number: 2 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMTTSWS*QSTHKP
Trigger: TGGTTTGTGAGTCGACTGTCAAGACCAGGAGGTGGT...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR GCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGTGCCAAAACAACAGTTaGTTTTGGCTGCTGGAAGCT +
Preference number: 2 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLCQNNS*FWLLEA
Trigger: AGCTTCCAGCAGCCAAAAGCAACTGTTGTTTTGGCA...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp GAGACACCGAGAATGATCTCAACAAAAAGGAACAGTGACCAGAATGCCTGGGGGCTGGGAGCACCTAAATaGCCACATGAAACCCTAGGC +
Preference number: 2 (lower is better)
Translates to: ETPRMISTKRNSDQNAWGLGAPK*PHETLG
Trigger: GCCTAGGGTTTCATGTGGGCATTTAGGTGCTCCCAG...CCCCCAGGCATTCTGGTCACTGTTCCTTTTTGTTGAGATCATTCTCGGTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CCA 90 bp AAGTCTGGAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTATGCGAGGTCAGAACTaGCATAGTGGCCAGGATCTC +
Preference number: 2 (lower is better)
Translates to: KSGSLWRACHLKGKDSLFMRGQN*HSGQDL
Trigger: GAGATCCTGGCCACTATGCCAGTTCTGACCTCGCAT...AAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp TTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCCAGGGACAGGAGGGTaGGACCACCTGGAACAAAGG +
Preference number: 2 (lower is better)
Translates to: FNQACTSGPSCQNNSCFWPGTGG*DHLEQR
Trigger: CCTTTGTTCCAGGTGGTCTCACCCTCCTGTCCCTGG...CCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCAGGAGACACCGGCTaGTGTGCCAAAGGCCCCAGT +
Preference number: 2 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLAGDTG*CAKGPS
Trigger: ACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGC...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAAAGTCTGGAAGCCTGTaGAGGGCCTGTCACCTTAAA +
Preference number: 2 (lower is better)
Translates to: KARIPCLHQADKCQTTTPKSGSL*RACHLK
Trigger: TTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp TGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAACAACAGTTGCTTTTaGCTGCTGGAAGCTGTAGCT +
Preference number: 2 (lower is better)
Translates to: CGGPVTLKARIPCLHQADNNSCF*LLEAVA
Trigger: AGCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTT...GTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp TTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTCGGGGTAGGGGGATaGGAGGTCAGAACTGGCATA +
Preference number: 2 (lower is better)
Translates to: FNQACTSGPSCQNNSCFWLGVGG*EVRTGI
Trigger: TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAG...CCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGACTTACAGGGAGGGTaGCACACAGCAAAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLDLQGG*HTAKAR
Trigger: GCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTC...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR TCA 90 bp TGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACACAGGACGACGGGAATaGTGTACATCCATCAGGCCT +
Preference number: 2 (lower is better)
Translates to: CHLKGKDSLFAPGRQMSNTGRRE*CTSIRP
Trigger: AGGCCTGATGGATGTACATCATTCCCGTCGTCCTGT...GTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601780.5
3UTR-3UTR TCA 90 bp GAGACACCGAGAATGATCTCAACAAAAAGGAACAGTGACCAGAATGCCTGGGGGCATTCCTTGGGTTTCTaGATAACGTATCAAGTGAGC +
Preference number: 2 (lower is better)
Translates to: ETPRMISTKRNSDQNAWGHSLGF*ITYQVS
Trigger: GCTCACTTGATACGTTATTCAGAAACCCAAGGAATG...CCCCCAGGCATTCTGGTCACTGTTCCTTTTTGTTGAGATCATTCTCGGTGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR GCA 90 bp CAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGCAAGGATTCCTTGTTTaGACCAGGCAGACAAATGTC +
Preference number: 2 (lower is better)
Translates to: QACTSGPSCQNNSCFWLLQGFLV*TRQTNV
Trigger: GACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTG...CAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR GCA 90 bp TTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGGACAAGGTACCATCCTaGTGGTTCCAGAGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: FNQACTSGPSCQNNSCFWDKVPS*WFQSSE
Trigger: CTCACTGCTCTGGAACCAGCAGGATGGTACCTTGTC...CCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp TGGAAATGCAACTGGGACTGCACATGGGAAACAAAGGAAAATGGAATTTGGTTCATGCGAGGTCAGAACTaGCATAGTGGCCAGGATCTC +
Preference number: 2 (lower is better)
Translates to: WKCNWDCTWETKENGIWFMRGQN*HSGQDL
Trigger: GAGATCCTGGCCACTATGCCAGTTCTGACCTCGCAT...GAACCAAATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CCA 90 bp ATTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGGTTCTTGGCCTTCTaGGCCTGTTCCATCTCCAGG +
Preference number: 2 (lower is better)
Translates to: ISIKLVHQDRLAKTTVAFGFLAF*ACSISR
Trigger: CCTGGAGATGGAACAGGCCCAGAAGGCCAAGAACCC...AAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGAAGGACTTCTGCTCCTaGGGGTTCTTGGCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLKDFCS*GFLAFW
Trigger: CCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTT...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CAA 90 bp GGTGCACCACCTCCTGGTCTTGACAGTCGACTCACAAACCATCACTaGTTTATAAACGCGTTTCCGATCTGCCATCGTAATTCCATTTTA +
Preference number: 2 (lower is better)
Translates to: GAPPPGLDSRLTNHH*FINAFPICHRNSIL
Trigger: TAAAATGGAATTACGATGGCAGATCGGAAACGCGTTTATAAACAAGTGATGGTTTGTGAGTCGACTGTCAAGACCAGGAGGTGGTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CCA 90 bp AAGTCTGGAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTTCTATTTACAGTGTCTaGGCTTTGACTCCACTAACT +
Preference number: 2 (lower is better)
Translates to: KSGSLWRACHLKGKDSLFSIYSV*ALTPLT
Trigger: AGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGA...AAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
3UTR CAA 90 bp CAAGTGAGCAGTGAATTTCAATCAAGCTTGTACATCAGGACCGTCTaGCCAAAACAACAGTTGCTTTTGGCTGCTGGAAGCTGTAGCTTT +
Preference number: 2 (lower is better)
Translates to: QVSSEFQSSLYIRTV*PKQQLLLAAGSCSF
Trigger: AAAGCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAATTCACTGCTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp ATTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTAAGTCTGGAAGCCTGTaGAGGGCCTGTCACCTTAAA +
Preference number: 2 (lower is better)
Translates to: ISIKLVHQDRLAKTTVAFKSGSL*RACHLK
Trigger: TTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT...AAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp ATTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTAACAACAGTTGCTTTTaGCTGCTGGAAGCTGTAGCT +
Preference number: 2 (lower is better)
Translates to: ISIKLVHQDRLAKTTVAFNNSCF*LLEAVA
Trigger: AGCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTT...AAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CCA 90 bp ATTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTTGTACATCCAGTATTTaGCGAAGAAGGACTTCTGCT +
Preference number: 2 (lower is better)
Translates to: ISIKLVHQDRLAKTTVAFCTSSI*RRRTSA
Trigger: AGCAGAAGTCCTTCTTCGCCAAATACTGGATGTACA...AAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599293.1
3UTR CAA 90 bp ACATGGGAAACAAAGGAAAATGGAATTTGGTTCACACAAACCTGTTaGGGAGATTGCATTTCCAGGAAATGGGCCAAATTGAGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: TWETKENGIWFTQTC*GDCISRKWAKLSLF
Trigger: AAACAAACTCAATTTGGCCCATTTCCTGGAAATGCAATCTCCCAAACAGGTTTGTGTGAACCAAATTCCATTTTCCTTTGTTTCCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR TCA 90 bp ATTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGTATCAAGTGAGCAGTaGATTTCAATCAAGCTTGTA +
Preference number: 2 (lower is better)
Translates to: ISIKLVHQDRLAKTTVAFVSSEQ*ISIKLV
Trigger: TACAAGCTTGATTGAAATTCACTGCTCACTTGATAC...AAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CCA 72 bp ACCCGCCGGGTCTGGCAGCCTGTCCCCGCAGTAGCCTaGGCTGTGCCCACGACACCCCCGCCGCCCAGCTAC +
Preference number: 3 (lower is better)
Translates to: TRRVWQPVPAVA*AVPTTPPPPSY
Trigger: GTAGCTGGGCGGCGGGGGTGTCGTGGGCACAGCCCAGGCTACTGCGGGGACAGGCTGCCAGACCCGGCGGGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CAA 90 bp AGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGGGCCCCGGGTCGCCTaGGGATCCGGACCCGGTACA +
Preference number: 3 (lower is better)
Translates to: REGGTQQRPAGPRSTAVQGPRVA*GSGPGT
Trigger: TGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCC...CTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CCA 72 bp TGCATGGCCGAGTTCCCAACCTGGACCCGCCGGGTCTaGCAGCCTGTCCCCGCAGTAGCCTGGGCTGTGCCC +
Preference number: 3 (lower is better)
Translates to: CMAEFPTWTRRV*QPVPAVAWAVP
Trigger: GGGCACAGCCCAGGCTACTGCGGGGACAGGCTGCCAGACCCGGCGGGTCCAGGTTGGGAACTCGGCCATGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CAA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGGGGCCCCGGGTCGCCTaGGGATCCGGACCCGGTACA +
Preference number: 3 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWGPRVA*GSGPGT
Trigger: TGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCC...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CCA 72 bp ACCAGCTTCCAGGCCATCCAGGGCCCCGGGTCGCCTTaGGATCCGGACCCGGTACAGGCCATTCAGGGCTGC +
Preference number: 3 (lower is better)
Translates to: TSFQAIQGPGSP*DPDPVQAIQGC
Trigger: GCAGCCCTGAATGGCCTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCCTGGATGGCCTGGAAGCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CAA 90 bp GGCAGCCCCCGGGGTGCGTCACCACCGACACGCCCACCACGTTGCCGGCCACATCCCCGCTTCCGGAAGTaGGCACTGTCATCGATCTCA +
Preference number: 3 (lower is better)
Translates to: GSPRGASPPTRPPRCRPHPRFRK*ALSSIS
Trigger: TGAGATCGATGACAGTGCCAACTTCCGGAAGCGGGG...ATGTGGCCGGCAACGTGGTGGGCGTGTCGGTGGTGACGCACCCCGGGGGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR GCA 72 bp GGACTAGGCGGAGGGCATGTTCCTCCGAGCCCAGGCTaGACCTTGGCACAGTGGAGGGTCCACCCACCCCAG +
Preference number: 3 (lower is better)
Translates to: GLGGGHVPPSPG*TLAQWRVHPPQ
Trigger: CTGGGGTGGGTGGACCCTCCACTGTGCCAAGGTGCAGCCTGGGCTCGGAGGAACATGCCCTCCGCCTAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 72 bp ACCGACACGCCCACCACGTTGCCGGCCACATCCACGTaGAGGGTCAGCTGGTCCGACAGGTGCGACTCCACC +
Preference number: 3 (lower is better)
Translates to: TDTPTTLPATST*RVSWSDRCDST
Trigger: GGTGGAGTCGCACCTGTCGGACCAGCTGACCCTGCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGTCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CCA 72 bp GACGACGGGAATGATGTACATCCATCAGGCCTCCTGTaGCGGTGGCGCGGGCCCTGGCGCAGCAGGACGCAG +
Preference number: 3 (lower is better)
Translates to: DDGNDVHPSGLL*RWRGPWRSRTQ
Trigger: CTGCGTCCTGCTGCGCCAGGGCCCGCGCCACCGCCACAGGAGGCCTGATGGATGTACATCATTCCCGTCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601780.5
3UTR-3UTR CAA 90 bp CTTCCAGGCCATCCAGGGCCCCGGGTCGCCTTGGGATCCGGACCCGGTACAGGCCCCCGCTTCCGGAAGTaGGCACTGTCATCGATCTCA +
Preference number: 3 (lower is better)
Translates to: LPGHPGPRVALGSGPGTGPRFRK*ALSSIS
Trigger: TGAGATCGATGACAGTGCCAACTTCCGGAAGCGGGG...GCCTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCCTGGATGGCCTGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR GCA 72 bp ACATCCCGGAGTCGGCCCCGCTCCTCCTCGCTGAGCTaGCGCTGTGACAGGGACAAGGTACCATCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: TSRSRPRSSSLS*RCDRDKVPSCW
Trigger: CCAGCAGGATGGTACCTTGTCCCTGTCACAGCGGCAGCTCAGCGAGGAGGAGCGGGGCCGACTCCGGGATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CCA 72 bp CTGCGCCCTGTTGAGGCAGGGAACGTTTCTGCTGCATaGCCGAGTTCCCAACCTGGACCCGCCGGGTCTGGC +
Preference number: 3 (lower is better)
Translates to: LRPVEAGNVSAA*PSSQPGPAGSG
Trigger: GCCAGACCCGGCGGGTCCAGGTTGGGAACTCGGCCATGCAGCAGAAACGTTCCCTGCCTCAACAGGGCGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp CATGTTCCTCCGAGCCCAGGCTGCACCTTGGCACAGTaGAGGGTCCACCCACCCCAGGTAGCCCAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: HVPPSPGCTLAQ*RVHPPQVAQVR
Trigger: CCTCACCTGGGCTACCTGGGGTGGGTGGACCCTCCACTGTGCCAAGGTGCAGCCTGGGCTCGGAGGAACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp ACCACGTTGCCGGCCACATCCACGTGCAGGGTCAGCTaGTCCGACAGGTGCGACTCCACCAGGGAGCACGCA +
Preference number: 3 (lower is better)
Translates to: TTLPATSTCRVS*SDRCDSTREHA
Trigger: TGCGTGCTCCCTGGTGGAGTCGCACCTGTCGGACCAGCTGACCCTGCACGTGGATGTGGCCGGCAACGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR GCA 72 bp GCCACATCCACGTGCAGGGTCAGCTGGTCCGACAGGTaGGACTCCACCAGGGAGCACGCAGGGACAAAGGAG +
Preference number: 3 (lower is better)
Translates to: ATSTCRVSWSDR*DSTREHAGTKE
Trigger: CTCCTTTGTCCCTGCGTGCTCCCTGGTGGAGTCGCACCTGTCGGACCAGCTGACCCTGCACGTGGATGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CCA 72 bp AGGGAACGTTTCTGCTGCATGGCCGAGTTCCCAACCTaGACCCGCCGGGTCTGGCAGCCTGTCCCCGCAGTA +
Preference number: 3 (lower is better)
Translates to: RERFCCMAEFPT*TRRVWQPVPAV
Trigger: TACTGCGGGGACAGGCTGCCAGACCCGGCGGGTCCAGGTTGGGAACTCGGCCATGCAGCAGAAACGTTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CAA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAAGCTGCACCGAGGTGTaGAACAGCTCCAGGTCCACG +
Preference number: 3 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVSCTEV*NSSRST
Trigger: CGTGGACCTGGAGCTGTTCAACACCTCGGTGCAGCT...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR TCA 72 bp CCCACCCCCACCCTGGCCCCCGGTGTCTGGCGCTCCTaGCATCATGAGGAACAGGACGACGGGAATGATGTA +
Preference number: 3 (lower is better)
Translates to: PTPTLAPGVWRS*HHEEQDDGNDV
Trigger: TACATCATTCCCGTCGTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACCGGGGGCCAGGGTGGGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CCA 72 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATaGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGG +
Preference number: 3 (lower is better)
Translates to: EAGEKAACSQTA*ARGRGMRGQNW
Trigger: CCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CCA 72 bp CCTTTCTCTCCCTGGGTCACAGAGATGGCCCCGGGGTaGCTGCGCCCTGTTGAGGCAGGGAACGTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: PFSPWVTEMAPG*LRPVEAGNVSA
Trigger: AGCAGAAACGTTCCCTGCCTCAACAGGGCGCAGCCACCCCGGGGCCATCTCTGTGACCCAGGGAGAGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp TGGGAGAAAGGACGTGACGCTGCCGCTTCACCGGGATaGGTTCCCACGTCCCTCCGCGTTGACCCACAGCTT +
Preference number: 3 (lower is better)
Translates to: WEKGRDAAASPG*VPTSLRVDPQL
Trigger: AAGCTGTGGGTCAACGCGGAGGGACGTGGGAACCCATCCCGGTGAAGCGGCAGCGTCACGTCCTTTCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 72 bp CGTACTCTGCGTCTGATTTTCCAGCAGCGAAGCCTCTaGCATCCGCCCCACCGTCCCGCTGGCTCTTGCTCA +
Preference number: 3 (lower is better)
Translates to: RTLRLIFQQRSL*HPPHRPAGSCS
Trigger: TGAGCAAGAGCCAGCGGGACGGTGGGGCGGATGGCAGAGGCTTCGCTGCTGGAAAATCAGACGCAGAGTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp GCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTaGCATAGTGGCCAGGATCTCGGGCTCTACTCCATG +
Preference number: 3 (lower is better)
Translates to: AWARGRGMRGQN*HSGQDLGLYSM
Trigger: CATGGAGTAGAGCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CCA 72 bp GCAGGTGATGGCACCACTCACTGGAACAAAGATCCCTaGAGGAGCACCCGATCCGGGCAGGTGGGAGGCACT +
Preference number: 3 (lower is better)
Translates to: AGDGTTHWNKDP*RSTRSGQVGGT
Trigger: AGTGCCTCCCACCTGCCCGGATCGGGTGCTCCTCCAGGGATCTTTGTTCCAGTGAGTGGTGCCATCACCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp TCCTCGTCTAGTCCCATTCGTTGTCCTTTCTCTCCCTaGGTCACAGAGATGGCCCCGGGGTGGCTGCGCCCT +
Preference number: 3 (lower is better)
Translates to: SSSSPIRCPFSP*VTEMAPGWLRP
Trigger: AGGGCGCAGCCACCCCGGGGCCATCTCTGTGACCCAGGGAGAGAAAGGACAACGAATGGGACTAGACGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CAA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGACCAGCAAACCCTTCTaGGGATGGCTGAGGACACAG +
Preference number: 3 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWTSKPF*GWLRTQ
Trigger: CTGTGTCCTCAGCCATCCCAAGAAGGGTTTGCTGGT...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CAA 90 bp CTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCACCAGCAAACCCTTCTaGGGATGGCTGAGGACACAG +
Preference number: 3 (lower is better)
Translates to: LGVGGCEVRTGIVARISGTSKPF*GWLRTQ
Trigger: CTGTGTCCTCAGCCATCCCAAGAAGGGTTTGCTGGT...GCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR TCA 72 bp GCTAAGACAGAGACTTCGAGGGAACCCGACCTTGCCTaGAGGACCAACAGCGCCCCCTGCAGGACACTTCCC +
Preference number: 3 (lower is better)
Translates to: AKTETSREPDLA*RTNSAPCRTLP
Trigger: GGGAAGTGTCCTGCAGGGGGCGCTGTTGGTCCTTCAGGCAAGGTCGGGTTCCCTCGAAGTCTCTGTCTTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 72 bp ATGTCTCCGACCAACAGATCCCTGGGAGAAAGGACGTaGCGCTGCCGCTTCACCGGGATGGGTTCCCACGTC +
Preference number: 3 (lower is better)
Translates to: MSPTNRSLGERT*RCRFTGMGSHV
Trigger: GACGTGGGAACCCATCCCGGTGAAGCGGCAGCGTCACGTCCTTTCTCCCAGGGATCTGTTGGTCGGAGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 72 bp GGCCCCTGGGTCCCCCTGTCACTCAGGCTGTCCACATaGAAGTCCAGATGTCTCCGACCAACAGATCCCTGG +
Preference number: 3 (lower is better)
Translates to: GPWVPLSLRLST*KSRCLRPTDPW
Trigger: CCAGGGATCTGTTGGTCGGAGACATCTGGACTTTCATGTGGACAGCCTGAGTGACAGGGGGACCCAGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 72 bp CATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATaGGAGGTCAGAACTGGCATAGTGGCCAGGATCTCG +
Preference number: 3 (lower is better)
Translates to: HVPRLHGLGVGG*EVRTGIVARIS
Trigger: CGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR GCA 72 bp TCCGGAACTCTGGACACTGCCTGGAGGAATCAGGCCTaGCGTAGGCCCAGGAAGGCGGAAACAAAGACGACG +
Preference number: 3 (lower is better)
Translates to: SGTLDTAWRNQA*RRPRKAETKTT
Trigger: CGTCGTCTTTGTTTCCGCCTTCCTGGGCCTACGGCAGGCCTGATTCCTCCAGGCAGTGTCCAGAGTTCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp GCCCTGAGCAGGGCCCCCAAGCCTGAGGCCCAGGAGTaGACAGACCTTTGTGACACCCATTCTCTCTTCCTT +
Preference number: 3 (lower is better)
Translates to: ALSRAPKPEAQE*TDLCDTHSLFL
Trigger: AAGGAAGAGAGAATGGGTGTCACAAAGGTCTGTCCACTCCTGGGCCTCAGGCTTGGGGGCCCTGCTCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CAA 90 bp AAGGTACCATCCTGCTGGTTCCAGAGCAGTGAGCCCCGCTTCCGGAAGTTGGCAACCAGCAAACCCTTCTaGGGATGGCTGAGGACACAG +
Preference number: 3 (lower is better)
Translates to: KVPSCWFQSSEPRFRKLATSKPF*GWLRTQ
Trigger: CTGTGTCCTCAGCCATCCCAAGAAGGGTTTGCTGGT...TGCCAACTTCCGGAAGCGGGGCTCACTGCTCTGGAACCAGCAGGATGGTACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CAA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGTACATCCAGTATTaGGCGAAGAAGGACTTCTGC +
Preference number: 3 (lower is better)
Translates to: EAGEKAACSQTAWARGRGMYIQY*AKKDFC
Trigger: GCAGAAGTCCTTCTTCGCCAAATACTGGATGTACAT...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599293.1
3UTR TCA 72 bp CAGGGACAAGGTACCATCCTGCTGGTTCCAGAGCAGTaGGCCCCGCTTCCGGAAGTTGGCACTGTCATCGAT +
Preference number: 3 (lower is better)
Translates to: QGQGTILLVPEQ*APLPEVGTVID
Trigger: ATCGATGACAGTGCCAACTTCCGGAAGCGGGGCTCACTGCTCTGGAACCAGCAGGATGGTACCTTGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CCA 72 bp CAGGTGTGTTGGCGGGCGCCTGCAATCCCCGCTATTTaGGAGGCTGATGCAGGAGAATCGCTTAAACTCAGG +
Preference number: 3 (lower is better)
Translates to: QVCWRAPAIPAI*EADAGESLKLR
Trigger: CCTGAGTTTAAGCGATTCTCCTGCATCAGCCTCCCAAATAGCGGGGATTGCAGGCGCCCGCCAACACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CAA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGTACATCAGGACCGTCTaGCCAAAACAACAGTTGCTT +
Preference number: 3 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWYIRTV*PKQQLL
Trigger: AAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTA...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CAA 90 bp GAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGAGCTGCACCGAGGTGTaGAACAGCTCCAGGTCCACG +
Preference number: 3 (lower is better)
Translates to: EACGGPVTLKARIPCLHQSCTEV*NSSRST
Trigger: CGTGGACCTGGAGCTGTTCAACACCTCGGTGCAGCT...CTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR TCA 72 bp ATTGAGAGAAGCCACAGGCGCCGGCCTGAGGCATTCTaGGTGCGTGGAATCCTCTATTACCACCTCCTGGCA +
Preference number: 3 (lower is better)
Translates to: IERSHRRRPEAF*VRGILYYHLLA
Trigger: TGCCAGGAGGTGGTAATAGAGGATTCCACGCACTCAGAATGCCTCAGGCCGGCGCCTGTGGCTTCTCTCAAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 72 bp AGAGAAGCCACAGGCGCCGGCCTGAGGCATTCTGAGTaGGTGGAATCCTCTATTACCACCTCCTGGCAAAGA +
Preference number: 3 (lower is better)
Translates to: REATGAGLRHSE*VESSITTSWQR
Trigger: TCTTTGCCAGGAGGTGGTAATAGAGGATTCCACGCACTCAGAATGCCTCAGGCCGGCGCCTGTGGCTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp AGGCTTTCGCAATGCCACGCAGCCGATAACATTTTCTaGTGGCAGGAAATGGGAGGGAGCAACCCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: RLSQCHAADNIF*WQEMGGSNPSW
Trigger: CCAGGAGGGGTTGCTCCCTCCCATTTCCTGCCACCAGAAAATGTTATCGGCTGCGTGGCATTGCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp CCCATTCTCTCTTCCTTTTCCATCTGTCCGGAACTCTaGACACTGCCTGGAGGAATCAGGCCTGCCGTAGGC +
Preference number: 3 (lower is better)
Translates to: PILSSFSICPEL*TLPGGIRPAVG
Trigger: GCCTACGGCAGGCCTGATTCCTCCAGGCAGTGTCCAGAGTTCCGGACAGATGGAAAAGGAAGAGAGAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CAA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGACCAGCAAACCCTTCTaGGGATGGCTGAGGACACAG +
Preference number: 3 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGTSKPF*GWLRTQ
Trigger: CTGTGTCCTCAGCCATCCCAAGAAGGGTTTGCTGGT...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CAA 90 bp TCGTTGTCCTTTCTCTCCCTGGGTCACAGAGATGGCCCCGGGGTGGCTGCGCCCAACCTACTCTATCTTTaGAGTTTCATACTTCATCCC +
Preference number: 3 (lower is better)
Translates to: SLSFLSLGHRDGPGVAAPNLLYL*SFILHP
Trigger: GGGATGAAGTATGAAACTCAAAAGATAGAGTAGGTT...GGGCGCAGCCACCCCGGGGCCATCTCTGTGACCCAGGGAGAGAAAGGACAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 72 bp GGGCCATGTCTTCCACAGACACATATGTGTGCAAAATaGTGCAGCAGAACAGGGGGACTCCTGCAGTGCTGC +
Preference number: 3 (lower is better)
Translates to: GPCLPQTHMCAK*CSRTGGLLQCC
Trigger: GCAGCACTGCAGGAGTCCCCCTGTTCTGCTGCATCATTTTGCACACATATGTGTCTGTGGAAGACATGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 72 bp CATTCCGCTCCCTTCCCAACTCTTCCTCTGACAACATaGAGCACCTCAGCACTGAGGGGACCTCACCTGAAT +
Preference number: 3 (lower is better)
Translates to: HSAPFPTLPLTT*STSALRGPHLN
Trigger: ATTCAGGTGAGGTCCCCTCAGTGCTGAGGTGCTTCATGTTGTCAGAGGAAGAGTTGGGAAGGGAGCGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 72 bp ACTTTAGGGGTAGGTATGGTGGTGCATAGGAGAACGTaGTTGGGACAGGGCAGTGCTCTGGTCCATGAGGTT +
Preference number: 3 (lower is better)
Translates to: TLGVGMVVHRRT*LGQGSALVHEV
Trigger: AACCTCATGGACCAGAGCACTGCCCTGTCCCAATCACGTTCTCCTATGCACCACCATACCTACCCCTAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CAA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCATGATGTGCCAGTATTaGGCGAAGAAGGACTTCTGC +
Preference number: 3 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALMMCQY*AKKDFC
Trigger: GCAGAAGTCCTTCTTCGCCAAATACTGGCACATCAT...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601780.5
3UTR GCA 72 bp ACAGCACTCACTAGGGTGCTATTTATAACCATACAATaGAGGAGGCTAGCTGCGTGTCGATCTGGGGGACAG +
Preference number: 3 (lower is better)
Translates to: TALTRVLFITIQ*RRLAACRSGGQ
Trigger: CTGTCCCCCAGATCGACACGCAGCTAGCCTCCTGCATTGTATGGTTATAAATAGCACCCTAGTGAGTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 72 bp GAAGGCAACCTCCCACGGTGCACCACCTCCTGGTCTTaGCAGTCGACTCACAAACCATCACTTGTTTATAAA +
Preference number: 3 (lower is better)
Translates to: EGNLPRCTTSWS*QSTHKPSLVYK
Trigger: TTTATAAACAAGTGATGGTTTGTGAGTCGACTGTCAAGACCAGGAGGTGGTGCACCGTGGGAGGTTGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp CATTCTGAGTGCGTGGAATCCTCTATTACCACCTCCTaGCAAAGAACGGAGCTGCAACCCAGCTATATGAGA +
Preference number: 3 (lower is better)
Translates to: HSECVESSITTS*QRTELQPSYMR
Trigger: TCTCATATAGCTGGGTTGCAGCTCCGTTCTTTGCCAGGAGGTGGTAATAGAGGATTCCACGCACTCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CAA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGAAACAACAGTTGCTTTaGGCTGCTGGAAGCTGTAGC +
Preference number: 3 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMKQQLL*AAGSCS
Trigger: GCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTTT...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
3UTR TCA 72 bp CCTCCTGGCAAAGAACGGAGCTGCAACCCAGCTATATaGGACACCGAGAATGATCTCAACAAAAAGGAACAG +
Preference number: 3 (lower is better)
Translates to: PPGKERSCNPAI*DTENDLNKKEQ
Trigger: CTGTTCCTTTTTGTTGAGATCATTCTCGGTGTCTCATATAGCTGGGTTGCAGCTCCGTTCTTTGCCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 72 bp TGTTTGATTTCCACCTCTTTTCTCTCCTCTCTCCTCTaGATCTGCCTCTTCCTCTTCTCACCTCCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: CLISTSFLSSLL*ICLFLFSPPSS
Trigger: GGAAGAGGGAGGTGAGAAGAGGAAGAGGCAGATTCAGAGGAGAGAGGAGAGAAAAGAGGTGGAAATCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp TTCAAGTCATTCTATGGGTGGGTGGATTGGCTCCCATaGAAATGCAACTGGGACTGCACATGGGAAACAAAG +
Preference number: 3 (lower is better)
Translates to: FKSFYGWVDWLP*KCNWDCTWETK
Trigger: CTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCATGGGAGCCAATCCACCCACCCATAGAATGACTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp TCACACATTTTCAAGTCATTCTATGGGTGGGTGGATTaGCTCCCATGGAAATGCAACTGGGACTGCACATGG +
Preference number: 3 (lower is better)
Translates to: SHIFKSFYGWVD*LPWKCNWDCTW
Trigger: CCATGTGCAGTCCCAGTTGCATTTCCATGGGAGCCAATCCACCCACCCATAGAATGACTTGAAAATGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CAA 90 bp TGTGCCTTGCTGACTGGAAGGTGGGTACAAATAAAGGAGGATGGACTGACAGCTACACTTGCAAAACTGTaGACATGTGCATCTGCTTGT +
Preference number: 3 (lower is better)
Translates to: CALLTGRWVQIKEDGLTATLAKL*TCASAC
Trigger: ACAAGCAGATGCACATGTCAACAGTTTTGCAAGTGT...AGCTGTCAGTCCATCCTCCTTTATTTGTACCCACCTTCCAGTCAGCAAGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 72 bp TTTCCTGGAATACCCAACAGAGTAACCCTGCCAGCCTaGAAGCAACCGAGACTTAGAGGGAAAGGACATAAT +
Preference number: 3 (lower is better)
Translates to: FPGIPNRVTLPA*KQPRLRGKGHN
Trigger: ATTATGTCCTTTCCCTCTAAGTCTCGGTTGCTTTCAGGCTGGCAGGGTTACTCTGTTGGGTATTCCAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR TCA 72 bp ACGGAGCTGCAACCCAGCTATATGAGACACCGAGAATaGTCTCAACAAAAAGGAACAGTGACCAGAATGCCT +
Preference number: 3 (lower is better)
Translates to: TELQPSYMRHRE*SQQKGTVTRMP
Trigger: AGGCATTCTGGTCACTGTTCCTTTTTGTTGAGATCATTCTCGGTGTCTCATATAGCTGGGTTGCAGCTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 72 bp TCATTCTATGGGTGGGTGGATTGGCTCCCATGGAAATaGAACTGGGACTGCACATGGGAAACAAAGGAAAAT +
Preference number: 3 (lower is better)
Translates to: SFYGWVDWLPWK*NWDCTWETKEN
Trigger: ATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCATGGGAGCCAATCCACCCACCCATAGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp TATGGGTGGGTGGATTGGCTCCCATGGAAATGCAACTaGGACTGCACATGGGAAACAAAGGAAAATGGAATT +
Preference number: 3 (lower is better)
Translates to: YGWVDWLPWKCN*DCTWETKENGI
Trigger: AATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCATGGGAGCCAATCCACCCACCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 72 bp GTGAATTTCAATCAAGCTTGTACATCAGGACCGTCTTaGCAAAACAACAGTTGCTTTTGGCTGCTGGAAGCT +
Preference number: 3 (lower is better)
Translates to: VNFNQACTSGPS*QNNSCFWLLEA
Trigger: AGCTTCCAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR GCA 72 bp CTCCCAAACAGCTGGGACTACAAGCATGAATCACTATaGCTGGCCAACCTACTCTATCTTTTGAGTTTCATA +
Preference number: 3 (lower is better)
Translates to: LPNSWDYKHESL*LANLLYLLSFI
Trigger: TATGAAACTCAAAAGATAGAGTAGGTTGGCCAGGCATAGTGATTCATGCTTGTAGTCCCAGCTGTTTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 72 bp AAGAGCAACACTTGCAAAACTGTTGACATGTGCATCTaGTTGTTTCTGTGGAGAGTATCTGCAGCATACCAG +
Preference number: 3 (lower is better)
Translates to: KSNTCKTVDMCI*LFLWRVSAAYQ
Trigger: CTGGTATGCTGCAGATACTCTCCACAGAAACAAGCAGATGCACATGTCAACAGTTTTGCAAGTGTTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CCA 72 bp GTTTCCTTTGTAACAACATTGTTGTGCCTTGCTGACTaGAAGGTGGGTACAAATAAAGGAGGATGGACTGAC +
Preference number: 3 (lower is better)
Translates to: VSFVTTLLCLAD*KVGTNKGGWTD
Trigger: GTCAGTCCATCCTCCTTTATTTGTACCCACCTTCCAGTCAGCAAGGCACAACAATGTTGTTACAAAGGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR-3UTR CAA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGTACAGTGTCTGGGCTTaGACTCCACTAACTGTTGGT +
Preference number: 3 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLYSVWA*TPLTVG
Trigger: ACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTA...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR-3UTR CAA 90 bp AGAGCAACACTTGCAAAACTGTTGACATGTGCATCTGCTTGTTTCTGTGGAGAGGAATTTCAATCAAGCTaGTACATCAGGACCGTCTTG +
Preference number: 3 (lower is better)
Translates to: RATLAKLLTCASACFCGEEFQSS*YIRTVL
Trigger: CAAGACGGTCCTGATGTACAAGCTTGATTGAAATTC...CTCTCCACAGAAACAAGCAGATGCACATGTCAACAGTTTTGCAAGTGTTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR GCA 72 bp ACAAACCATCACTTGTTTATAAACGCGTTTCCGATCTaGCATCGTAATTCCATTTTAGTCATGCATCCCGAG +
Preference number: 3 (lower is better)
Translates to: TNHHLFINAFPI*HRNSILVMHPE
Trigger: CTCGGGATGCATGACTAAAATGGAATTACGATGGCAGATCGGAAACGCGTTTATAAACAAGTGATGGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp CAGCCCCCGGGGTGCGTCACCACCGACACGCCCACCACGTTGCCGGCCACATCCGCAGCAGCCCCACCGTaGCACAGGCCTCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: QPPGCVTTDTPTTLPATSAAAPP*HRPRPL
Trigger: GAGAGGGCGAGGCCTGTGGCACGGTGGGGCTGCTGC...GGATGTGGCCGGCAACGTGGTGGGCGTGTCGGTGGTGACGCACCCCGGGGGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp CAGCCCCCGGGGTGCGTCACCACCGACACGCCCACCACGTTGCCGGCCACATCCTGCAAGACGGGACGCTaGCCAGCCTGGGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: QPPGCVTTDTPTTLPATSCKTGR*PAWALT
Trigger: GGTGAGGGCCCAGGCTGGTCAGCGTCCCGTCTTGCA...GGATGTGGCCGGCAACGTGGTGGGCGTGTCGGTGGTGACGCACCCCGGGGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
3UTR CAA 72 bp CCCCCGGGGTGCGTCACCACCGACACGCCCACCACGTaGCCGGCCACATCCACGTGCAGGGTCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PPGCVTTDTPTT*PATSTCRVSWS
Trigger: GGACCAGCTGACCCTGCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGTCGGTGGTGACGCACCCCGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCGCAGCAGCCCCACCGTaGCACAGGCCTCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RAQETPAAVPKAPVQLLLAAAPP*HRPRPL
Trigger: GAGAGGGCGAGGCCTGTGGCACGGTGGGGCTGCTGC...GAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GGCAGCCCCCGGGGTGCGTCACCACCGACACGCCCACCACGTTGCCGGCCACATCAGGCCATTCAGGGCTaGCACATCCCGGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GSPRGASPPTRPPRCRPHQAIQG*HIPESA
Trigger: GGCCGACTCCGGGATGTGGCAGCCCTGAATGGCCTG...ATGTGGCCGGCAACGTGGTGGGCGTGTCGGTGGTGACGCACCCCGGGGGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GGGAGGCCCCTGGGTGTGCAAGACGGGACGCTGACCAGCCTGGGCCCTCACCGGCCGGCCACATCCACGTaGAGGGTCAGCTGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: GRPLGVQDGTLTSLGPHRPATST*RVSWSD
Trigger: GTCGGACCAGCTGACCCTGCACGTGGATGTGGCCGG...CCGGTGAGGGCCCAGGCTGGTCAGCGTCCCGTCTTGCACACCCAGGGGCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GGGGAGGCGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTTCTCCAGGCGCTCAATaGAGGCCGCCGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GEAGAGDTGCCAKGPSPASPGAQ*RPPSQG
Trigger: GCCCTGAGACGGCGGCCTTCATTGAGCGCCTGGAGA...AGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp ACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCCACGACCCCAGGGGCTaGACTAGGCGTCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TGRVAHSKGPQALVAPQSHDPRG*TRRRAQ
Trigger: CTGGGCCCGACGCCTAGTGCAGCCCCTGGGGTCGTG...GGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGGGCCCCGGGTCGCCTTaGGATCCGGACCCGGTACAG +
Preference number: 4 (lower is better)
Translates to: GAGDTGCCAKGPSPAAPLGPGSP*DPDPVQ
Trigger: CTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCC...CAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp CCCCCACCCTGGCCCCCGGTGTCTGGCGCTCCTGACATCATGAGGAACAGGACGTGCAAGACGGGACGCTaGCCAGCCTGGGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: PPPWPPVSGAPDIMRNRTCKTGR*PAWALT
Trigger: GGTGAGGGCCCAGGCTGGTCAGCGTCCCGTCTTGCA...CGTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACCGGGGGCCAGGGTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGCAGCAGCCCCACCGTaGCACAGGCCTCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVAAAPP*HRPRPL
Trigger: GAGAGGGCGAGGCCTGTGGCACGGTGGGGCTGCTGC...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GGGGAGGCGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCAGGAGACACCGGCTaGTGTGCCAAAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GEAGAGDTGCCAKGPSPAAGDTG*CAKGPS
Trigger: ACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGC...AGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCAGCCACGACCCCAGGGGCTaGACTAGGCGTCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RRHRLLCQRPQSSCSSASHDPRG*TRRRAQ
Trigger: CTGGGCCCGACGCCTAGTGCAGCCCCTGGGGTCGTG...GCTGGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCAGCAGCGAAGCCTCTaGCATCCGCCCCACCGTCCC +
Preference number: 4 (lower is better)
Translates to: GAGDTGCCAKGPSPAAPLQQRSL*HPPHRP
Trigger: GGGACGGTGGGGCGGATGGCAGAGGCTTCGCTGCTG...CAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GGGGAGGCGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTACGTGCAGGGTCAGCTaGTCCGACAGGTGCGACTCC +
Preference number: 4 (lower is better)
Translates to: GEAGAGDTGCCAKGPSPATCRVS*SDRCDS
Trigger: GGAGTCGCACCTGTCGGACCAGCTGACCCTGCACGT...AGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGCGCCGTCTCAGGGCCTaGGGCTGTGGTGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWRRLRA*GCGGRL
Trigger: CAGCCGCCCACCACAGCCCCAGGCCCTGAGACGGCG...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGTCTCCCCCAGCAAGGTaGGGCCCCACCGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: GAGDTGCCAKGPSPAAPLSPPAR*GPTGPC
Trigger: ACATGGCCCGGTGGGGCCCCACCTTGCTGGGGGAGA...CAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CAA 72 bp GGCGGAGGGCATGTTCCTCCGAGCCCAGGCTGCACCTaGGCACAGTGGAGGGTCCACCCACCCCAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: GGGHVPPSPGCT*AQWRVHPPQVA
Trigger: GGCTACCTGGGGTGGGTGGACCCTCCACTGTGCCAAGGTGCAGCCTGGGCTCGGAGGAACATGCCCTCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CAA 72 bp CACCAGCTTCCAGGCCATCCAGGGCCCCGGGTCGCCTaGGGATCCGGACCCGGTACAGGCCATTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HQLPGHPGPRVA*GSGPGTGHSGL
Trigger: CAGCCCTGAATGGCCTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCCTGGATGGCCTGGAAGCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp CGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCTCTCCAGGCGCTCAATaGAGGCCGCCGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RRRHRLLCQRPQSSCSSASPGAQ*RPPSQG
Trigger: GCCCTGAGACGGCGGCCTTCATTGAGCGCCTGGAGA...GGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp TCGTTGTCCTTTCTCTCCCTGGGTCACAGAGATGGCCCCGGGGTGGCTGCGCCCCTATCCTGGGGGAGGTaGGAGGCCACGCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLSFLSLGHRDGPGVAAPLSWGR*EATRRA
Trigger: AGCCCTCCGCGTGGCCTCTCACCTCCCCCAGGATAG...GGGCGCAGCCACCCCGGGGCCATCTCTGTGACCCAGGGAGAGAAAGGACAACGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCAGCCAGGGCCCCCAAGCCTaGGGCCCAGGAGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: RRHRLLCQRPQSSCSSASQGPQA*GPGVDR
Trigger: TCTGTCCACTCCTGGGCCTCAGGCTTGGGGGCCCTG...GCTGGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp AGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGTGCCCCAGCGCTGGCTaGCGCCATCTCGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: REGGTQQRPAGPRSTAVQCPSAG*RHLGFF
Trigger: GAAGAAGCCGAGATGGCGGCAGCCAGCGCTGGGGCA...CTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCCCGGCCACATCCACGTaGAGGGTCAGCTGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: RRRHRLLCQRPQSSCSSAPATST*RVSWSD
Trigger: GTCGGACCAGCTGACCCTGCACGTGGATGTGGCCGG...GGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCGCTGTGGTGGGCGGCTaGAGCTGCACCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: RRRHRLLCQRPQSSCSSAAVVGG*SCTEVL
Trigger: CAACACCTCGGTGCAGCTGCAGCCGCCCACCACAGC...GGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp ACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCTGGCCCCTGCATCCCTaGCTGGTGGGCCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: TGRVAHSKGPQALVAPQSWPLHP*LVGLCL
Trigger: GAGGCAAAGGCCCACCAGGCAGGGATGCAGGGGCCA...GGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp ACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCCCTTCCCTGCTTGCCTaGTCCCTCACGCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TGRVAHSKGPQALVAPQSPSLLA*SLTPLL
Trigger: GAGCAGGGGCGTGAGGGAGCAGGCAAGCAGGGAAGG...GGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GGGGAGGCGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTGGGGGTTCTTaGCCTTCTGGGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GEAGAGDTGCCAKGPSPAAPGGS*PSGPVP
Trigger: TGGAACAGGCCCAGAAGGCCAAGAACCCCCAGGAGC...AGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCGCCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCGAGATGGCCCCGGGGTaGCTGCGCCCTGTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GTQQRPAGPRSTAVQVGCEMAPG*LRPVEA
Trigger: TGCCTCAACAGGGCGCAGCCACCCCGGGGCCATCTC...GCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTCTCCAGGCGCTCAATaGAGGCCGCCGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GTQQRPAGPRSTAVQVGCSPGAQ*RPPSQG
Trigger: GCCCTGAGACGGCGGCCTTCATTGAGCGCCTGGAGA...GCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp AGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGAGGCAGCTGGGGCCATaGGTCTGGAGATCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: REGGTQQRPAGPRSTAVQRQLGP*VWRSGV
Trigger: CACCCCTGATCTCCAGACTCATGGCCCCAGCTGCCT...CTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGCAGGCCATTCAGGGCTaGCACATCCCGGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: EAGEKAACSQTAWARGRGQAIQG*HIPESA
Trigger: GGCCGACTCCGGGATGTGGCAGCCCTGAATGGCCTG...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTACAGGCCATTCAGGGCTaGCACATCCCGGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVQAIQG*HIPESA
Trigger: GGCCGACTCCGGGATGTGGCAGCCCTGAATGGCCTG...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp ACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCGTGGGCGGCTGCAGCTaGACCGAGGTGTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: TGRVAHSKGPQALVAPQSVGGCS*TEVLNS
Trigger: GCTGTTCAACACCTCGGTGCAGCTGCAGCCGCCCAC...GGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GGAGACATAGCCACCAGCTTCCAGGCCATCCAGGGCCCCGGGTCGCCTTGGGATGCTGTGGTGGGCGGCTaGAGCTGCACCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GDIATSFQAIQGPGSPWDAVVGG*SCTEVL
Trigger: CAACACCTCGGTGCAGCTGCAGCCGCCCACCACAGC...ATCCCAAGGCGACCCGGGGCCCTGGATGGCCTGGAAGCTGGTGGCTATGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GGGGAGGCGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCGAAGAAGGACTTCTaGTCCTGGGGGTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GEAGAGDTGCCAKGPSPAAKKDF*SWGFLA
Trigger: GGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGC...AGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCGCCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GGCAGCCCCCGGGGTGCGTCACCACCGACACGCCCACCACGTTGCCGGCCACATAGACCGCGCCCGCTATaGACAGCTAAAGAGCACTCA +
Preference number: 4 (lower is better)
Translates to: GSPRGASPPTRPPRCRPHRPRPL*TAKEHS
Trigger: TGAGTGCTCTTTAGCTGTGCATAGCGGGCGCGGTCT...ATGTGGCCGGCAACGTGGTGGGCGTGTCGGTGGTGACGCACCCCGGGGGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCGGGCCTGCCCCGGGCTCGACTaGGCGCTGCTACCGCCATCA +
Preference number: 4 (lower is better)
Translates to: PGRQMSNHDPRGCTRRRACPGLD*ALLPPS
Trigger: TGATGGCGGTAGCAGCGCCCAGTCGAGCCCGGGGCA...GGCCCGACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATACGCCGTCTCAGGGCCTaGGGCTGTGGTGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGIRRLRA*GCGGRL
Trigger: CAGCCGCCCACCACAGCCCCAGGCCCTGAGACGGCG...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGCTGCACTAGGCGTCGGGCCCAGAAGCCCCCGGCCATCCAGCCCCGACTCTTTGACTTACAGGGAGGGTaGCACACAGCAAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GCTRRRAQKPPAIQPRLFDLQGG*HTAKAR
Trigger: GCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTC...AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGACGCCTAGTGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGCTGCACTAGGCGTCGGGCCCAGAAGCCCCCGGCCATCCAGCCCCGACTCTTTGGACGAGGCTTGAGCTaGGACCAAGGCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: GCTRRRAQKPPAIQPRLFGRGLS*DQGHGD
Trigger: GTCTCCATGGCCTTGGTCCCAGCTCAAGCCTCGTCC...AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGACGCCTAGTGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp ACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCTGCACCTTGGCACAGTaGAGGGTCCACCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: TGRVAHSKGPQALVAPQSCTLAQ*RVHPPQ
Trigger: CTGGGGTGGGTGGACCCTCCACTGTGCCAAGGTGCA...GGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTCCATCAGGCCTCCTGTaGCGGTGGCGCGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SQTAWARGRGMRGQNWHSPSGLL*RWRGPW
Trigger: CCAGGGCCCGCGCCACCGCCACAGGAGGCCTGATGG...ACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376918.7
ENST00000601780.5
3UTR CAA 72 bp GGGGCTGTGGTGGGCGGCTGCAGCTGCACCGAGGTGTaGAACAGCTCCAGGTCCACGTCCTCCACCTCATGG +
Preference number: 4 (lower is better)
Translates to: GAVVGGCSCTEV*NSSRSTSSTSW
Trigger: CCATGAGGTGGAGGACGTGGACCTGGAGCTGTTCAACACCTCGGTGCAGCTGCAGCCGCCCACCACAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp AGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGCTGAGCTGCCGCTGTaGCAGGGACAAGGTACCATC +
Preference number: 4 (lower is better)
Translates to: REGGTQQRPAGPRSTAVQAELPL*QGQGTI
Trigger: GATGGTACCTTGTCCCTGTCACAGCGGCAGCTCAGC...CTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GGCTGCACTAGGCGTCGGGCCCAGAAGCCCCCGGCCATCCAGCCCCGACTCTTTGGTGTCTGGCGCTCCTaGCATCATGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: GCTRRRAQKPPAIQPRLFGVWRS*HHEEQD
Trigger: GTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACC...AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGACGCCTAGTGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp AGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGCCAGGGACAGGAGGGTaGGACCACCTGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: REGGTQQRPAGPRSTAVQPGTGG*DHLEQR
Trigger: CCTTTGTTCCAGGTGGTCTCACCCTCCTGTCCCTGG...CTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGGCAGAGGACGAGGCTTaGGCTGGGACCAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: EAGEKAACSQTAWARGRGAEDEA*AGTKAM
Trigger: CATGGCCTTGGTCCCAGCTCAAGCCTCGTCCTCTGC...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp CTCTCCTACCCTCCTTCCCTCCCTCTTTCTCTCTCCCCCTCCGCACCGCTCCATCCACAGGCGCCGGCCTaGGGCATTCTGAGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSYPPSLPLSLSPSAPLHPQAPA*GILSAW
Trigger: CCACGCACTCAGAATGCCTCAGGCCGGCGCCTGTGG...ATGGAGCGGTGCGGAGGGGGAGAGAGAAAGAGGGAGGGAAGGAGGGTAGGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGCAGGTTTCCAGGTCCTaGCCAGGAGGCAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: REGGTQQRPAGPRSTAVQQVSRS*PGGRSP
Trigger: TGGACTCCTGCCTCCTGGTCAGGACCTGGAAACCTG...CTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp CTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGTGCCCCAGCGCTGGCTaGCGCCATCTCGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LHGLGVGGCEVRTGIVARCPSAG*RHLGFF
Trigger: GAAGAAGCCGAGATGGCGGCAGCCAGCGCTGGGGCA...CCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000601780.5
CDS-3UTR GCA 90 bp CGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCTCCTCCTCGCTGAGCTaGCGCTGTGACAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: RRRHRLLCQRPQSSCSSASSSLS*RCDRDK
Trigger: CTTGTCCCTGTCACAGCGGCAGCTCAGCGAGGAGGA...GGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GAGGACACAGGGGACTCCAGCAGAAAGGGAGGCCCCTGGGTGTGCAAGACGGGACAGGCCATTCAGGGCTaGCACATCCCGGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: EDTGDSSRKGGPWVCKTGQAIQG*HIPESA
Trigger: GGCCGACTCCGGGATGTGGCAGCCCTGAATGGCCTG...TCCCGTCTTGCACACCCAGGGGCCTCCCTTTCTGCTGGAGTCCCCTGTGTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GAGGACACAGGGGACTCCAGCAGAAAGGGAGGCCCCTGGGTGTGCAAGACGGGACCGGCCACATCCACGTaGAGGGTCAGCTGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: EDTGDSSRKGGPWVCKTGPATST*RVSWSD
Trigger: GTCGGACCAGCTGACCCTGCACGTGGATGTGGCCGG...TCCCGTCTTGCACACCCAGGGGCCTCCCTTTCTGCTGGAGTCCCCTGTGTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCAGCGTGGGCGGCTGCAGCTaGACCGAGGTGTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: RRHRLLCQRPQSSCSSASVGGCS*TEVLNS
Trigger: GCTGTTCAACACCTCGGTGCAGCTGCAGCCGCCCAC...GCTGGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGGCTGTGGTGGGCGGCTaGAGCTGCACCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWAVVGG*SCTEVL
Trigger: CAACACCTCGGTGCAGCTGCAGCCGCCCACCACAGC...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GGCTGCACTAGGCGTCGGGCCCAGAAGCCCCCGGCCATCCAGCCCCGACTCTTTGCGAAGAAGGACTTCTaGTCCTGGGGGTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GCTRRRAQKPPAIQPRLFAKKDF*SWGFLA
Trigger: GGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGC...AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGACGCCTAGTGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp TCCAGGGCCCCGGGTCGCCTTGGGATCCGGACCCGGTACAGGCCATTCAGGGCTGCGAAGAAGGACTTCTaGTCCTGGGGGTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SRAPGRLGIRTRYRPFRAAKKDF*SWGFLA
Trigger: GGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGC...AGCCCTGAATGGCCTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCAGCAGACACCGGCTGCTGTaGCAAAGGCCCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRHRLLCQRPQSSCSSASRHRLL*QRPQSS
Trigger: GCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCT...GCTGGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGAGACACCGGCTGCTGTaGCAAAGGCCCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EAGEKAACSQTAWARGRGRHRLL*QRPQSS
Trigger: GCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCT...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCCGGATGACGCCTTTCTaGTCCATTCCGCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RAQETPAAVPKAPVQLLLRMTPF*SIPLPS
Trigger: GGAAGGGAGCGGAATGGAGCAGAAAGGCGTCATCCG...GAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GGGGAGGCGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTAAGGTACCATCCTGCTaGTTCCAGAGCAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GEAGAGDTGCCAKGPSPAKVPSC*FQSSEP
Trigger: GGGCTCACTGCTCTGGAACCAGCAGGATGGTACCTT...AGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCGCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGGAGGCCCCTGGGTGTGCAAGACGGGACGCTGACCAGCCTGGGCCCTCACCGGATGCGAGGTCAGAACTaGCATAGTGGCCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: GRPLGVQDGTLTSLGPHRMRGQN*HSGQDL
Trigger: GAGATCCTGGCCACTATGCCAGTTCTGACCTCGCAT...CCGGTGAGGGCCCAGGCTGGTCAGCGTCCCGTCTTGCACACCCAGGGGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCTGTTCCCAGACTGCATaGGCTCGGGGTAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: RRRHRLLCQRPQSSCSSACSQTA*ARGRGM
Trigger: CATCCCCCTACCCCGAGCCCATGCAGTCTGGGAACA...GGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp ACCAGGAGGCAGGAGTCCATACCGAGGCCCAAACAGGCTAGCCCTGAGCAGGGCGGCCAAAGAGGAGGCTaGGCCGATGGTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TRRQESIPRPKQASPEQGGQRGG*ADGPGG
Trigger: GCCACCTGGACCATCGGCCCAGCCTCCTCTTTGGCC...GCCCTGCTCAGGGCTAGCCTGTTTGGGCCTCGGTATGGACTCCTGCCTCCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCAGCCTGGTTCCAGAGCAGTaGGCCCCGCTTCCGGAAGTT +
Preference number: 4 (lower is better)
Translates to: RRHRLLCQRPQSSCSSASLVPEQ*APLPEV
Trigger: AACTTCCGGAAGCGGGGCTCACTGCTCTGGAACCAG...GCTGGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp CATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCTCCAGGCGCTCAATaGAGGCCGCCGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HGLGVGGCEVRTGIVARISPGAQ*RPPSQG
Trigger: GCCCTGAGACGGCGGCCTTCATTGAGCGCCTGGAGA...GATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGGCGCTCCTGACATCATaGGGAACAGGACGACGGGAA +
Preference number: 4 (lower is better)
Translates to: GAGDTGCCAKGPSPAAPLALLTS*GTGRRE
Trigger: TTCCCGTCGTCCTGTTCCTCATGATGTCAGGAGCGC...CAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GGAGACATAGCCACCAGCTTCCAGGCCATCCAGGGCCCCGGGTCGCCTTGGGATCCAGGGACAGGAGGGTaGGACCACCTGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: GDIATSFQAIQGPGSPWDPGTGG*DHLEQR
Trigger: CCTTTGTTCCAGGTGGTCTCACCCTCCTGTCCCTGG...ATCCCAAGGCGACCCGGGGCCCTGGATGGCCTGGAAGCTGGTGGCTATGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp ACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCGCCACACAACACAGCTaGGCTCCACACAGCCACATG +
Preference number: 4 (lower is better)
Translates to: TGRVAHSKGPQALVAPQSATQHS*APHSHM
Trigger: CATGTGGCTGTGTGGAGCTCAGCTGTGTTGTGTGGC...GGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp CCTGGGGCTGTGGTGGGCGGCTGCAGCTGCACCGAGGTGTTGAACAGCTCCAGGGCCACACAACACAGCTaGGCTCCACACAGCCACATG +
Preference number: 4 (lower is better)
Translates to: PGAVVGGCSCTEVLNSSRATQHS*APHSHM
Trigger: CATGTGGCTGTGTGGAGCTCAGCTGTGTTGTGTGGC...CCTGGAGCTGTTCAACACCTCGGTGCAGCTGCAGCCGCCCACCACAGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGCTGGAACCTCCAGGGTaGAGGGATGGGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWLEPPG*RDGADT
Trigger: GGTGTCTGCCCCATCCCTTCACCCTGGAGGTTCCAG...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGGTCACGAGGCTAGGATaGGGGTCCAGGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: EAGEKAACSQTAWARGRGVTRLG*GSRRQR
Trigger: TCTCTGCCTCCTGGACCCTCATCCTAGCCTCGTGAC...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AAGGTACCATCCTGCTGGTTCCAGAGCAGTGAGCCCCGCTTCCGGAAGTTGGCAGAACAGGCCGCATCCTaGCGCCCGTGCGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KVPSCWFQSSEPRFRKLAEQAAS*RPCACA
Trigger: AGCGCAGGCGCACGGGCGTCAGGATGCGGCCTGTTC...TGCCAACTTCCGGAAGCGGGGCTCACTGCTCTGGAACCAGCAGGATGGTACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS-3UTR GCA 90 bp TGTTCCATCTCCAGGCGCTCAATGAAGGCCGCCGTCTCAGGGCCTGGGGCTGTGACACGCCCACCACGTTaGCGGCCACATCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: CSISRRSMKAAVSGPGAVTRPPR*RPHPRA
Trigger: TGCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGT...CACAGCCCCAGGCCCTGAGACGGCGGCCTTCATTGAGCGCCTGGAGATGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCTCTACTCACGACCCCAGGGGCTaGACTAGGCGTCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VGGCEVRTGIVARISGSTHDPRG*TRRRAQ
Trigger: CTGGGCCCGACGCCTAGTGCAGCCCCTGGGGTCGTG...AGTAGAGCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GGCTGCACTAGGCGTCGGGCCCAGAAGCCCCCGGCCATCCAGCCCCGACTCTTTCTTAGCCTCTCAAAGTaGTGGGACCACAGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: GCTRRRAQKPPAIQPRLFLSLSK*WDHRCE
Trigger: CTCGCACCTGTGGTCCCAGCACTTTGAGAGGCTAAG...AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGACGCCTAGTGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp CATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCCCTCCGAGCCCAGGCTaGACCTTGGCACAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HGLGVGGCEVRTGIVARIPPSPG*TLAQWR
Trigger: CCTCCACTGTGCCAAGGTGCAGCCTGGGCTCGGAGG...GATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTTTCCCTTCCCTGCTTaGCTGCTCCCTCACGCCCCT +
Preference number: 4 (lower is better)
Translates to: GTQQRPAGPRSTAVQVGCFPFPA*LLPHAP
Trigger: AGGGGCGTGAGGGAGCAGGCAAGCAGGGAAGGGAAA...GCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp CGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCTGTCTTTCCCTTCCCTaGTTGCCTGCTCCCTCACGC +
Preference number: 4 (lower is better)
Translates to: RRRHRLLCQRPQSSCSSACLSLP*LPAPSR
Trigger: GCGTGAGGGAGCAGGCAAGCAGGGAAGGGAAAGACA...GGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp CGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCCGTCCCGCTGGCTCTTaGTCATTGTCTTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RAQETPAAVPKAPVQLLLRPAGS*SLSFPS
Trigger: GGAAGGGAAAGACAATGAGCAAGAGCCAGCGGGACG...GAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp CGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCGGGTTCTTGGCCTTCTaGGCCTGTTCCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRRHRLLCQRPQSSCSSAGFLAF*ACSISR
Trigger: CCTGGAGATGGAACAGGCCCAGAAGGCCAAGAACCC...GGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGCTCCTGGGGGTTCTTaGCCTTCTGGGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVAPGGS*PSGPVP
Trigger: TGGAACAGGCCCAGAAGGCCAAGAACCCCCAGGAGC...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCCAAAGGCACAGAGGCTaGAGAGAAGGCGGCATGTTC +
Preference number: 4 (lower is better)
Translates to: RAQETPAAVPKAPVQLLLQRHRG*REGGMF
Trigger: GAACATGCCGCCTTCTCTCCAGCCTCTGTGCCTTTG...GAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp ACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGCGCCCCCTCCTCAGCTaGAGGGGCATGGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: TEAGEKAACSQTAWARGRRPLLS*RGMVLC
Trigger: ACAGAGGACCATGCCCCTCCAGCTGAGGAGGGGGCG...CCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp CGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCGCCCCACCGTCCCGCTaGCTCTTGCTCATTGTCTTT +
Preference number: 4 (lower is better)
Translates to: RRRHRLLCQRPQSSCSSAAPPSR*LLLIVF
Trigger: AAAGACAATGAGCAAGAGCCAGCGGGACGGTGGGGC...GGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp CATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCCACGTCCCTCCGCGTTaGCCCACAGCTTCCTTACGG +
Preference number: 4 (lower is better)
Translates to: HGLGVGGCEVRTGIVARIHVPPR*PTASLR
Trigger: CCGTAAGGAAGCTGTGGGTCAACGCGGAGGGACGTG...GATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TCCTGCTGGTTCCAGAGCAGTGAGCCCCGCTTCCGGAAGTTGGCACTGTCATCGTGCCCCAGCGCTGGCTaGCGCCATCTCGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SCWFQSSEPRFRKLALSSCPSAG*RHLGFF
Trigger: GAAGAAGCCGAGATGGCGGCAGCCAGCGCTGGGGCA...CGATGACAGTGCCAACTTCCGGAAGCGGGGCTCACTGCTCTGGAACCAGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS-3UTR GCA 90 bp AGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGTCGATCTCAAATGAGTaGTCCAGCAGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: REGGTQQRPAGPRSTAVQSISNE*SSSSPT
Trigger: GGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGA...CTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CTCTCCTACCCTCCTTCCCTCCCTCTTTCTCTCTCCCCCTCCGCACCGCTCCATACACGCCCACCACGTTaGCGGCCACATCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: LSYPPSLPLSLSPSAPLHTRPPR*RPHPRA
Trigger: TGCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGT...ATGGAGCGGTGCGGAGGGGGAGAGAGAAAGAGGGAGGGAAGGAGGGTAGGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGGCGAAGAAGGACTTCTaGTCCTGGGGGTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EAGEKAACSQTAWARGRGAKKDF*SWGFLA
Trigger: GGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGC...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCGGAGACACCGGCTGCTGTaGCAAAGGCCCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: APGRQMSNHDPRGCTRRRRHRLL*QRPQSS
Trigger: GCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCT...CCGACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCGCAGGAGACACCGGCTaGTGTGCCAAAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: HGLGVGGCEVRTGIVARIAGDTG*CAKGPS
Trigger: ACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGC...GATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTACTCGGGGTAGGGGGATaGGAGGTCAGAACTGGCATA +
Preference number: 4 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVLGVGG*EVRTGI
Trigger: TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAG...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCATGCAGGAGGCTAGCTaGGTGTCGATCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: GTQQRPAGPRSTAVQVGCMQEAS*VSIWGT
Trigger: TGTCCCCCAGATCGACACGCAGCTAGCCTCCTGCAT...GCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp AATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCATCTCCAGGTGGCCCCTaGATCCCTGCCTGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: NRLTGRVAHSKGPQALVASPGGP*IPAWWA
Trigger: GGCCCACCAGGCAGGGATGCAGGGGCCACCTGGAGA...TGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCGGGACTACAGGCGCCTaGCACCATGCCCTGCTAATT +
Preference number: 4 (lower is better)
Translates to: GTQQRPAGPRSTAVQVGCGTTGA*HHALLI
Trigger: AATTAGCAGGGCATGGTGGCAGGCGCCTGTAGTCCC...GCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp ACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAAGGTACCATCCTGCTaGTTCCAGAGCAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: TGRVAHSKGPQALVAPQSKVPSC*FQSSEP
Trigger: GGGCTCACTGCTCTGGAACCAGCAGGATGGTACCTT...GGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGTGTTCCCAGACTGCATaGGCTCGGGGTAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWCSQTA*ARGRGM
Trigger: CATCCCCCTACCCCGAGCCCATGCAGTCTGGGAACA...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGGACTTACAGGGAGGGTaGCACACAGCAAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LHGLGVGGCEVRTGIVARDLQGG*HTAKAR
Trigger: GCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTC...CCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCGGGCCATTAGCCAGGTGTGTTaGCGGGCGCCTGCAATCCCC +
Preference number: 4 (lower is better)
Translates to: PGRQMSNHDPRGCTRRRAISQVC*RAPAIP
Trigger: GGGGATTGCAGGCGCCCGCCAACACACCTGGCTAAT...GGCCCGACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp ACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCCGACCAACAGATCCCTaGGAGAAAGGACGTGACGCT +
Preference number: 4 (lower is better)
Translates to: TGRVAHSKGPQALVAPQSRPTDP*EKGRDA
Trigger: AGCGTCACGTCCTTTCTCCCAGGGATCTGTTGGTCG...GGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCCCGCTCCTCCTCGCTaGGCTGCCGCTGTGACAGGG +
Preference number: 4 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLPAPPR*AAAVTG
Trigger: CCCTGTCACAGCGGCAGCTCAGCGAGGAGGAGCGGG...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGGTAACCCTGCCAGCCTaGAAGCAACCGAGACTTAGA +
Preference number: 4 (lower is better)
Translates to: GAGDTGCCAKGPSPAAPLVTLPA*KQPRLR
Trigger: TCTAAGTCTCGGTTGCTTTCAGGCTGGCAGGGTTAC...CAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCCCCGGTCTCTGGGCTaGCGCTGTCTTAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLPRSLG*RCLRGA
Trigger: GGCGCCCCTAAGACAGCGTCAGCCCAGAGACCGGGG...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp TCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGTGGCTGCGCCCTGTTaGGGCAGGGAACGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SQTAWARGRGMRGQNWHSVAAPC*GRERFC
Trigger: GCAGAAACGTTCCCTGCCTCAACAGGGCGCAGCCAC...ACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGCTCAGGCTGTCCACATaGAAGTCCAGATGTCTCCGA +
Preference number: 4 (lower is better)
Translates to: REGGTQQRPAGPRSTAVQLRLST*KSRCLR
Trigger: TCGGAGACATCTGGACTTTCATGTGGACAGCCTGAG...CTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAACACGCCCACCACGTTaGCGGCCACATCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGITRPPR*RPHPRA
Trigger: TGCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGT...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGCAGGAGACACCGGCTaGTGTGCCAAAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGIAGDTG*CAKGPS
Trigger: ACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGC...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGTGTTCCTGCCTTGCCTaGTCCCAGGTTTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LHGLGVGGCEVRTGIVARCSCLA*SQVSRS
Trigger: GGACCTGGAAACCTGGGAGCAGGCAAGGCAGGAACA...CCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp CTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCGGCAGGGAACGTTTCTaGTGCATGGCCGAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LGVGGCEVRTGIVARISGGRERF*CMAEFP
Trigger: TGGGAACTCGGCCATGCAGCAGAAACGTTCCCTGCC...GCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GGAGACATAGCCACCAGCTTCCAGGCCATCCAGGGCCCCGGGTCGCCTTGGGATAGACCGCGCCCGCTATaGACAGCTAAAGAGCACTCA +
Preference number: 4 (lower is better)
Translates to: GDIATSFQAIQGPGSPWDRPRPL*TAKEHS
Trigger: TGAGTGCTCTTTAGCTGTGCATAGCGGGCGCGGTCT...ATCCCAAGGCGACCCGGGGCCCTGGATGGCCTGGAAGCTGGTGGCTATGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTGGGTTGCCCCAGCGCTaGCTGCCGCCATCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRGLPQR*LPPSRL
Trigger: AAGCCGAGATGGCGGCAGCCAGCGCTGGGGCAACCC...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCCCCGCTTCCGGAAGTTaGCACTGTCATCGATCTCAA +
Preference number: 4 (lower is better)
Translates to: RRRHRLLCQRPQSSCSSAPASGS*HCHRSQ
Trigger: TTGAGATCGATGACAGTGCCAACTTCCGGAAGCGGG...GGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGAAGGTACCATCCTGCTaGTTCCAGAGCAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: EAGEKAACSQTAWARGRGKVPSC*FQSSEP
Trigger: GGGCTCACTGCTCTGGAACCAGCAGGATGGTACCTT...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAAAGGTACCATCCTGCTaGTTCCAGAGCAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVKVPSC*FQSSEP
Trigger: GGGCTCACTGCTCTGGAACCAGCAGGATGGTACCTT...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TCCTGCTGGTTCCAGAGCAGTGAGCCCCGCTTCCGGAAGTTGGCACTGTCATCGACGTGCAGGGTCAGCTaGTCCGACAGGTGCGACTCC +
Preference number: 4 (lower is better)
Translates to: SCWFQSSEPRFRKLALSSTCRVS*SDRCDS
Trigger: GGAGTCGCACCTGTCGGACCAGCTGACCCTGCACGT...CGATGACAGTGCCAACTTCCGGAAGCGGGGCTCACTGCTCTGGAACCAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGAGACATAGCCACCAGCTTCCAGGCCATCCAGGGCCCCGGGTCGCCTTGGGATAAGGACTTCTGCTCCTaGGGGTTCTTGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GDIATSFQAIQGPGSPWDKDFCS*GFLAFW
Trigger: CCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTT...ATCCCAAGGCGACCCGGGGCCCTGGATGGCCTGGAAGCTGGTGGCTATGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GCCAGTATTTGGCGAAGAAGGACTTCTGCTCCTGGGGGTTCTTGGCCTTCTGGGCAGAGGACAAGGGGCTaGCCCAGGTGGCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: ASIWRRRTSAPGGSWPSGQRTRG*PRWPRG
Trigger: CCCACGAGGCCACCTGGGCCAGCCCCTTGTCCTCTG...CCCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGCCAAATACTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS-3UTR CCA 90 bp AGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGATGCGAGGTCAGAACTaGCATAGTGGCCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: REGGTQQRPAGPRSTAVQMRGQN*HSGQDL
Trigger: GAGATCCTGGCCACTATGCCAGTTCTGACCTCGCAT...CTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGCAAAGGCACAGAGGCTaGAGAGAAGGCGGCATGTTC +
Preference number: 4 (lower is better)
Translates to: EAGEKAACSQTAWARGRGQRHRG*REGGMF
Trigger: GAACATGCCGCCTTCTCTCCAGCCTCTGTGCCTTTG...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TCCAGGGCCCCGGGTCGCCTTGGGATCCGGACCCGGTACAGGCCATTCAGGGCTAAGTCTGGAAGCCTGTaGAGGGCCTGTCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: SRAPGRLGIRTRYRPFRAKSGSL*RACHLK
Trigger: TTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT...AGCCCTGAATGGCCTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CTCTCCTACCCTCCTTCCCTCCCTCTTTCTCTCTCCCCCTCCGCACCGCTCCATGGAAGCCGAGGCAGGTaGATCACTCGAGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LSYPPSLPLSLSPSAPLHGSRGR*ITRVQQ
Trigger: CTGCTGGACTCGAGTGATCCACCTGCCTCGGCTTCC...ATGGAGCGGTGCGGAGGGGGAGAGAGAAAGAGGGAGGGAAGGAGGGTAGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATATCCAGGGAGGGGAAGTaGGTGCTGGAGCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGISREGK*VLEPRV
Trigger: CACTCTGGGCTCCAGCACCCACTTCCCCTCCCTGGA...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp ACCAGGAGGCAGGAGTCCATACCGAGGCCCAAACAGGCTAGCCCTGAGCAGGGCACTCTGGACACTGCCTaGAGGAATCAGGCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: TRRQESIPRPKQASPEQGTLDTA*RNQACR
Trigger: ACGGCAGGCCTGATTCCTCCAGGCAGTGTCCAGAGT...GCCCTGCTCAGGGCTAGCCTGTTTGGGCCTCGGTATGGACTCCTGCCTCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp ACCAGGAGGCAGGAGTCCATACCGAGGCCCAAACAGGCTAGCCCTGAGCAGGGCTTCCTCTTCTCTGGCTaGAGCTCCCCGCTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TRRQESIPRPKQASPEQGFLFSG*SSPLLH
Trigger: ATGGAGGAGCGGGGAGCTCCAGCCAGAGAAGAGGAA...GCCCTGCTCAGGGCTAGCCTGTTTGGGCCTCGGTATGGACTCCTGCCTCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp CTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGTCAGCTGGAGGGGCATaGTCCTCTGTCGCTACTTCC +
Preference number: 4 (lower is better)
Translates to: LHGLGVGGCEVRTGIVARSAGGA*SSVATS
Trigger: GGAAGTAGCGACAGAGGACCATGCCCCTCCAGCTGA...CCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp CCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCGGGCCGTCATCGATCTCAAATaGGTGCTCCAGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PGRQMSNHDPRGCTRRRAVIDLK*VLQQQP
Trigger: GGGCTGCTGCTGGAGCACTCATTTGAGATCGATGAC...GGCCCGACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGGTCATCGATCTCAAATaGGTGCTCCAGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWVIDLK*VLQQQP
Trigger: GGGCTGCTGCTGGAGCACTCATTTGAGATCGATGAC...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGCCCGCTCCTCCTCGCTaGGCTGCCGCTGTGACAGGG +
Preference number: 4 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGPAPPR*AAAVTG
Trigger: CCCTGTCACAGCGGCAGCTCAGCGAGGAGGAGCGGG...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp AGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGCAGAGAATGAGGATTaGGTTAGGGTCAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: REGGTQQRPAGPRSTAVQAENED*VRVRTV
Trigger: CACTGTCCTGACCCTAACTCAATCCTCATTCTCTGC...CTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp ACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTGGAGGTTGCATTaGGCCAAAATTGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: TGRVAHSKGPQALVAPQSRWRLH*AKIEPL
Trigger: CAGTGGCTCAATTTTGGCTCAATGCAACCTCCACCT...GGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp ACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCGGTGCCCAATGTTTCTaGAGACCAGCAACTGCTAAG +
Preference number: 4 (lower is better)
Translates to: TGRVAHSKGPQALVAPQSGAQCF*RPATAK
Trigger: CTTAGCAGTTGCTGGTCTTCAGAAACATTGGGCACC...GGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCCTTCCTCTGACAACATaGAGCACCTCAGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: GTQQRPAGPRSTAVQVGCLPLTT*STSALR
Trigger: CCTCAGTGCTGAGGTGCTTCATGTTGTCAGAGGAAG...GCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGGGGTGGGAGGGCAATaGCCTGACACAGTGTTACCG +
Preference number: 4 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGIGVGGQ*PDTVLP
Trigger: CGGTAACACTGTGTCAGGTCATTGCCCTCCCACCCC...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAACAGGACGACGGGAATaGTGTACATCCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVTGRRE*CTSIRP
Trigger: AGGCCTGATGGATGTACATCATTCCCGTCGTCCTGT...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376918.7
ENST00000601780.5
CDS-3UTR TCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGGCGAAGGGACGGCTGTaGGCCAAGAGCCGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLAKGRL*AKSRGA
Trigger: TGCTCCGCGGCTCTTGGCTCACAGCCGTCCCTTCGC...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS-3UTR GCA 90 bp GAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGCAGCCCCACCGTaGCACAGGCCTCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: EACGGPVTLKARIPCLHQAAAPP*HRPRPL
Trigger: GAGAGGGCGAGGCCTGTGGCACGGTGGGGCTGCTGC...CTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp ACCAGGAGGCAGGAGTCCATACCGAGGCCCAAACAGGCTAGCCCTGAGCAGGGCTCGATCTCAAATGAGTaGTCCAGCAGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: TRRQESIPRPKQASPEQGSISNE*SSSSPT
Trigger: GGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGA...GCCCTGCTCAGGGCTAGCCTGTTTGGGCCTCGGTATGGACTCCTGCCTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGGACAAGGTACCATCCTaGTGGTTCCAGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: EAGEKAACSQTAWARGRGDKVPS*WFQSSE
Trigger: CTCACTGCTCTGGAACCAGCAGGATGGTACCTTGTC...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCGCGAAGAAGGACTTCTaGTCCTGGGGGTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HGLGVGGCEVRTGIVARIAKKDF*SWGFLA
Trigger: GGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGC...GATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCAAGACACCGGCTGCTGTaGCAAAGGCCCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NRLTGRVAHSKGPQALVARHRLL*QRPQSS
Trigger: GCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCT...TGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGCACGACCCCAGGGGCTaGACTAGGCGTCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGHDPRG*TRRRAQ
Trigger: CTGGGCCCGACGCCTAGTGCAGCCCCTGGGGTCGTG...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GGGAGGCCCCTGGGTGTGCAAGACGGGACGCTGACCAGCCTGGGCCCTCACCGGACATCAGGACCGTCTTaGCAAAACAACAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GRPLGVQDGTLTSLGPHRTSGPS*QNNSCF
Trigger: AAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGT...CCGGTGAGGGCCCAGGCTGGTCAGCGTCCCGTCTTGCACACCCAGGGGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGTCAAGGTACCGCCACTaGACTCCAGCTTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: EAGEKAACSQTAWARGRGSRYRH*TPAWVT
Trigger: TGTTACCCAAGCTGGAGTGCAGTGGCGGTACCTTGA...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TGCCAGTATTTGGCGAAGAAGGACTTCTGCTCCTGGGGGTTCTTGGCCTTCTGGTGCCCCGGGCTCGACTaGGCGCTGCTACCGCCATCA +
Preference number: 4 (lower is better)
Translates to: CQYLAKKDFCSWGFLAFWCPGLD*ALLPPS
Trigger: TGATGGCGGTAGCAGCGCCCAGTCGAGCCCGGGGCA...CCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGCCAAATACTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS-3UTR CCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGCCCGCTTCCGGAAGTTaGCACTGTCATCGATCTCAA +
Preference number: 4 (lower is better)
Translates to: EAGEKAACSQTAWARGRGPASGS*HCHRSQ
Trigger: TTGAGATCGATGACAGTGCCAACTTCCGGAAGCGGG...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGGCCCCGGGTCGCCTTaGGATCCGGACCCGGTACAG +
Preference number: 4 (lower is better)
Translates to: EACGGPVTLKARIPCLHQGPGSP*DPDPVQ
Trigger: CTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCC...CTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGCTCCTGGGGGTTCTTaGCCTTCTGGGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGIAPGGS*PSGPVP
Trigger: TGGAACAGGCCCAGAAGGCCAAGAACCCCCAGGAGC...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCCAAAGGCACAGAGGCTaGAGAGAAGGCGGCATGTTC +
Preference number: 4 (lower is better)
Translates to: LGVGGCEVRTGIVARISGQRHRG*REGGMF
Trigger: GAACATGCCGCCTTCTCTCCAGCCTCTGTGCCTTTG...GCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGAGCTGGAGATGAGTTaGGGAATCGCTGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVELEMS*GIAGEE
Trigger: CTCTTCACCAGCGATTCCCCAACTCATCTCCAGCTC...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp CGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCCATTCTATGGGTGGGTaGATTGGCTCCCATGGAAAT +
Preference number: 4 (lower is better)
Translates to: RAQETPAAVPKAPVQLLLHSMGG*IGSHGN
Trigger: ATTTCCATGGGAGCCAATCCACCCACCCATAGAATG...GAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp CGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTCTATTACCACCTCCTaGCAAAGAACGGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: RAQETPAAVPKAPVQLLLSITTS*QRTELQ
Trigger: TTGCAGCTCCGTTCTTTGCCAGGAGGTGGTAATAGA...GAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp ACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGTGTCCTTTCTCTCCCTaGGTCACAGAGATGGCCCCG +
Preference number: 4 (lower is better)
Translates to: TEAGEKAACSQTAWARGRCPFSP*VTEMAP
Trigger: CGGGGCCATCTCTGTGACCCAGGGAGAGAAAGGACA...CCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGCGCTCCTGACATCATaGGGAACAGGACGACGGGAA +
Preference number: 4 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGIALLTS*GTGRRE
Trigger: TTCCCGTCGTCCTGTTCCTCATGATGTCAGGAGCGC...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp CAGGGACCAGGACTCCAAGTTGGGAACACTTCCCAAAAAGCATCAGTAGGCCTGTGCAAGACGGGACGCTaGCCAGCCTGGGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: QGPGLQVGNTSQKASVGLCKTGR*PAWALT
Trigger: GGTGAGGGCCCAGGCTGGTCAGCGTCCCGTCTTGCA...CAGGCCTACTGATGCTTTTTGGGAAGTGTTCCCAACTTGGAGTCCTGGTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGTGCAAGACGGGACGCTaGCCAGCCTGGGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGCKTGR*PAWALT
Trigger: GGTGAGGGCCCAGGCTGGTCAGCGTCCCGTCTTGCA...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGCCACACAACACAGCTaGGCTCCACACAGCCACATG +
Preference number: 4 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGIATQHS*APHSHM
Trigger: CATGTGGCTGTGTGGAGCTCAGCTGTGTTGTGTGGC...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTACACGCCCACCACGTTaGCGGCCACATCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRTRPPR*RPHPRA
Trigger: TGCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGT...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCGGACTCCTGCAGTGCTaGTTAGAACTACTCAAATCC +
Preference number: 4 (lower is better)
Translates to: RRRHRLLCQRPQSSCSSAGLLQC*LELLKS
Trigger: GGATTTGAGTAGTTCTAAGCAGCACTGCAGGAGTCC...GGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GAGGACACAGGGGACTCCAGCAGAAAGGGAGGCCCCTGGGTGTGCAAGACGGGAAGCAAGGGGGAAGCATaGACCACCATCACACACACA +
Preference number: 4 (lower is better)
Translates to: EDTGDSSRKGGPWVCKTGSKGEA*TTITHT
Trigger: TGTGTGTGTGATGGTGGTGCATGCTTCCCCCTTGCT...TCCCGTCTTGCACACCCAGGGGCCTCCCTTTCTGCTGGAGTCCCCTGTGTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGGGTTGCCCCAGCGCTaGCTGCCGCCATCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGGLPQR*LPPSRL
Trigger: AAGCCGAGATGGCGGCAGCCAGCGCTGGGGCAACCC...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGGGTTGCCCCAGCGCTaGCTGCCGCCATCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALGLPQR*LPPSRL
Trigger: AAGCCGAGATGGCGGCAGCCAGCGCTGGGGCAACCC...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCTGCCCCGGGCTCGACTaGGCGCTGCTACCGCCATCA +
Preference number: 4 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALCPGLD*ALLPPS
Trigger: TGATGGCGGTAGCAGCGCCCAGTCGAGCCCGGGGCA...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGCCCGCTTCCGGAAGTTaGCACTGTCATCGATCTCAA +
Preference number: 4 (lower is better)
Translates to: LHGLGVGGCEVRTGIVARPASGS*HCHRSQ
Trigger: TTGAGATCGATGACAGTGCCAACTTCCGGAAGCGGG...CCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGCGCCGTCTCAGGGCCTaGGGCTGTGGTGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMRRLRA*GCGGRL
Trigger: CAGCCGCCCACCACAGCCCCAGGCCCTGAGACGGCG...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCACGCCGTCTCAGGGCCTaGGGCTGTGGTGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPRRLRA*GCGGRL
Trigger: CAGCCGCCCACCACAGCCCCAGGCCCTGAGACGGCG...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGGGTTCTTGGCCTTCTaGGCCTGTTCCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGIGFLAF*ACSISR
Trigger: CCTGGAGATGGAACAGGCCCAGAAGGCCAAGAACCC...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGAAGTTGGCACTGTCATCGATCTCAAATGAGTGCTCCAGCAGCAGCCCCACCGAGAAAGGGAGGCCCCTaGGTGTGCAAGACGGGACGC +
Preference number: 4 (lower is better)
Translates to: GSWHCHRSQMSAPAAAPPRKGGP*VCKTGR
Trigger: GCGTCCCGTCTTGCACACCCAGGGGCCTCCCTTTCT...CGGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGATGACAGTGCCAACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACCAGAGGACAAGGGGCTaGCCCAGGTGGCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: CGGPVTLKARIPCLHQADQRTRG*PRWPRG
Trigger: CCCACGAGGCCACCTGGGCCAGCCCCTTGTCCTCTG...GTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCCAGAGGACAAGGGGCTaGCCCAGGTGGCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALQRTRG*PRWPRG
Trigger: CCCACGAGGCCACCTGGGCCAGCCCCTTGTCCTCTG...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CCCTGGCCCCCGGTGTCTGGCGCTCCTGACATCATGAGGAACAGGACGACGGGAAAGTCTGGAAGCCTGTaGAGGGCCTGTCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: PWPPVSGAPDIMRNRTTGKSGSL*RACHLK
Trigger: TTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT...TCCCGTCGTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACCGGGGGCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGTTAGGGTCAGGACAGTaGACACAGAGAGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWLGSGQ*TQRGGD
Trigger: GTCTCCTCCTCTCTGTGTCCACTGTCCTGACCCTAA...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGGGAGCAACCCCTCCTaGAGCATTTACCTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGIGSNPS*SIYLAR
Trigger: CCTGGCAAGGTAAATGCTCCAGGAGGGGTTGCTCCC...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACGCCGAGTTCCCAACCTaGACCCGCCGGGTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CGGPVTLKARIPCLHQADAEFPT*TRRVWQ
Trigger: CTGCCAGACCCGGCGGGTCCAGGTTGGGAACTCGGC...GTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GGGTGGTGGAGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTCCTGGGTCACAGAGATaGCCCCGGGGTGGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GWWRGFYLQCLGFDSTNCPGSQR*PRGGCA
Trigger: GGCGCAGCCACCCCGGGGCCATCTCTGTGACCCAGG...ACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCTCCACCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGCACTGCACTCTAGCTTaGGCAACACAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWHCTLA*ATQQDS
Trigger: GGAGTCTTGCTGTGTTGCCCAAGCTAGAGTGCAGTG...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGCCGCTTCACCGGGATaGGTTCCCACGTCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALAASPG*VPTSLR
Trigger: GCGGAGGGACGTGGGAACCCATCCCGGTGAAGCGGC...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGCCGGCACCTGCGCACTaGCACCCGTCCGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMPAPAH*HPSAPG
Trigger: CCCAGGTGCGGACGGGTGCCAGTGCGCAGGTGCCGG...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601780.5
3UTR CAA 72 bp CAACTGCTAAGACAGAGACTTCGAGGGAACCCGACCTaGCCTGAAGGACCAACAGCGCCCCCTGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: QLLRQRLRGNPT*PEGPTAPPAGH
Trigger: GTGTCCTGCAGGGGGCGCTGTTGGTCCTTCAGGCAAGGTCGGGTTCCCTCGAAGTCTCTGTCTTAGCAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCTCTCCAGGCGCTCAATaGAGGCCGCCGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALSPGAQ*RPPSQG
Trigger: GCCCTGAGACGGCGGCCTTCATTGAGCGCCTGGAGA...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp CAGGGACCAGGACTCCAAGTTGGGAACACTTCCCAAAAAGCATCAGTAGGCCTGGAACCCGACCTTGCCTaGAGGACCAACAGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: QGPGLQVGNTSQKASVGLEPDLA*RTNSAP
Trigger: GGGGGCGCTGTTGGTCCTTCAGGCAAGGTCGGGTTC...CAGGCCTACTGATGCTTTTTGGGAAGTGTTCCCAACTTGGAGTCCTGGTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGGTGGGCGGCTGCAGCTaGACCGAGGTGTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLVGGCS*TEVLNS
Trigger: GCTGTTCAACACCTCGGTGCAGCTGCAGCCGCCCAC...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACTCGGGGTAGGGGGATaGGAGGTCAGAACTGGCATA +
Preference number: 4 (lower is better)
Translates to: NRLTGRVAHSKGPQALVALGVGG*EVRTGI
Trigger: TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAG...TGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGCAAGGATTCCTTGTTTaGACCAGGCAGACAAATGTC +
Preference number: 4 (lower is better)
Translates to: REGGTQQRPAGPRSTAVQQGFLV*TRQTNV
Trigger: GACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTG...CTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCGGACGTGGATTCCACTaGATCTTTTGTCTATTCTGG +
Preference number: 4 (lower is better)
Translates to: RRRHRLLCQRPQSSCSSAGRGFH*IFCLFW
Trigger: CCAGAATAGACAAAAGATGCAGTGGAATCCACGTCC...GGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp CTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCTCTGTGGAGAGTATCTaGAGCATACCAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LGVGGCEVRTGIVARISGSVESI*SIPGDR
Trigger: TCTGTCCCCTGGTATGCTGCAGATACTCTCCACAGA...GCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGCTGGGAGGTGGAGGTTaGATTGAGCCAAAATTGAGC +
Preference number: 4 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWLGGGG*IEPKLS
Trigger: GCTCAATTTTGGCTCAATGCAACCTCCACCTCCCAG...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GAGGACACAGGGGACTCCAGCAGAAAGGGAGGCCCCTGGGTGTGCAAGACGGGACTGAGGCAAGAGAATTaGTTGAACCTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: EDTGDSSRKGGPWVCKTGLRQEN*LNLGGG
Trigger: TCCACCTCCCAGGTTCAAGCAATTCTCTTGCCTCAG...TCCCGTCTTGCACACCCAGGGGCCTCCCTTTCTGCTGGAGTCCCCTGTGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp ACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGCCCGCTTCCGGAAGTTaGCACTGTCATCGATCTCAA +
Preference number: 4 (lower is better)
Translates to: TEAGEKAACSQTAWARGRPASGS*HCHRSQ
Trigger: TTGAGATCGATGACAGTGCCAACTTCCGGAAGCGGG...CCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGGGCCCCGGGTCGCCTTaGGATCCGGACCCGGTACAG +
Preference number: 4 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMGPGSP*DPDPVQ
Trigger: CTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCC...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGCAGAGGACAAGGGGCTaGCCCAGGTGGCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: RQGFLVCTRQTNVKPRPQQRTRG*PRWPRG
Trigger: CCCACGAGGCCACCTGGGCCAGCCCCTTGTCCTCTG...CTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGAAGTCTGGAAGCCTGTaGAGGGCCTGTCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: LHGLGVGGCEVRTGIVARKSGSL*RACHLK
Trigger: TTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT...CCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCTCCTCCGTCTCCAGGTaGCCCCTGCATCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALSSVSR*PLHPCL
Trigger: CAGGCAGGGATGCAGGGGCCACCTGGAGACGGAGGA...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCAGTCATCGATCTCAAATaGGTGCTCCAGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: NRLTGRVAHSKGPQALVAVIDLK*VLQQQP
Trigger: GGGCTGCTGCTGGAGCACTCATTTGAGATCGATGAC...TGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp CCCCCACCCTGGCCCCCGGTGTCTGGCGCTCCTGACATCATGAGGAACAGGACGCATTCCTTGGGTTTCTaGATAACGTATCAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PPPWPPVSGAPDIMRNRTHSLGF*ITYQVS
Trigger: GCTCACTTGATACGTTATTCAGAAACCCAAGGAATG...CGTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACCGGGGGCCAGGGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp CTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGCAGGCTGGAGTAAAGTaGTTCAATCACAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LHGLGVGGCEVRTGIVARQAGVK*FNHSSG
Trigger: TCCTGAGCTGTGATTGAATCACTTTACTCCAGCCTG...CCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp CTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCTGCAACCCAGCTATATaGGACACCGAGAATGATCTC +
Preference number: 4 (lower is better)
Translates to: LGVGGCEVRTGIVARISGCNPAI*DTENDL
Trigger: GAGATCATTCTCGGTGTCTCATATAGCTGGGTTGCA...GCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACGTGGGCGGCTGCAGCTaGACCGAGGTGTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: CGGPVTLKARIPCLHQADVGGCS*TEVLNS
Trigger: GCTGTTCAACACCTCGGTGCAGCTGCAGCCGCCCAC...GTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp TGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACGCAGGAGACACCGGCTaGTGTGCCAAAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: CGGPVTLKARIPCLHQADAGDTG*CAKGPS
Trigger: ACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGC...GTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTACAAGGATTCCTTGTTTaGACCAGGCAGACAAATGTC +
Preference number: 4 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVQGFLV*TRQTNV
Trigger: GACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTG...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGCCAAAACAACAGTTaGTTTTGGCTGCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GTQQRPAGPRSTAVQVGCCQNNS*FWLLEA
Trigger: AGCTTCCAGCAGCCAAAAGCAACTGTTGTTTTGGCA...GCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CCCCCACCCTGGCCCCCGGTGTCTGGCGCTCCTGACATCATGAGGAACAGGACGACATCAGGACCGTCTTaGCAAAACAACAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: PPPWPPVSGAPDIMRNRTTSGPS*QNNSCF
Trigger: AAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGT...CGTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACCGGGGGCCAGGGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCAGCACCAGAGATGGAAACTaGCCCAGCTATGTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: RRHRLLCQRPQSSCSSASTRDGN*PSYVKR
Trigger: TCTTTTGACATAGCTGGGGCAGTTTCCATCTCTGGT...GCTGGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCATTTACCTTGCCAGGTaGTCTCACATCTTAGACCAG +
Preference number: 4 (lower is better)
Translates to: GTQQRPAGPRSTAVQVGCIYLAR*SHILDQ
Trigger: CTGGTCTAAGATGTGAGAGCACCTGGCAAGGTAAAT...GCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGCTGAGGCATTCTGAGTaGGTGGAATCCTCTATTACC +
Preference number: 4 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWLRHSE*VESSIT
Trigger: GGTAATAGAGGATTCCACGCACTCAGAATGCCTCAG...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTACCAACAGCGCCCCCTaGAGGACACTTCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRTNSAP*RTLPSI
Trigger: AATGGAGGGAAGTGTCCTGCAGGGGGCGCTGTTGGT...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp CATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCCCTTTTTCTCACTTCTaGTCTCCCTGTCCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: HGLGVGGCEVRTGIVARIPFSHF*SPCPAL
Trigger: AAGAGCCGGACAGGGAGAGCAGAAGTGAGAAAAAGG...GATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCTCCTGGGCCCTTCTCTaGCGCACCTTCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALSWALL*RTFHSC
Trigger: GCAGCTGTGGAAGGTGCGGCAGAGAAGGGCCCAGGA...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACCCTCCCCCAGGTCAGTaGTCGGCGTTTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CGGPVTLKARIPCLHQADPPPGQ*SAFPPS
Trigger: AGAGGGAGGAAACGCCGAGCACTGACCTGGGGGAGG...GTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp AAGTCTGGAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTTGCCCCGGGCTCGACTaGGCGCTGCTACCGCCATCA +
Preference number: 4 (lower is better)
Translates to: KSGSLWRACHLKGKDSLFCPGLD*ALLPPS
Trigger: TGATGGCGGTAGCAGCGCCCAGTCGAGCCCGGGGCA...AAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCACGTGCAGGGTCAGCTaGTCCGACAGGTGCGACTCC +
Preference number: 4 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALTCRVS*SDRCDS
Trigger: GGAGTCGCACCTGTCGGACCAGCTGACCCTGCACGT...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGGCTCCTGGGGGTTCTTaGCCTTCTGGGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLAPGGS*PSGPVP
Trigger: TGGAACAGGCCCAGAAGGCCAAGAACCCCCAGGAGC...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CAGGGACCAGGACTCCAAGTTGGGAACACTTCCCAAAAAGCATCAGTAGGCCTGAGAAAGGGAGGCCCCTaGGTGTGCAAGACGGGACGC +
Preference number: 4 (lower is better)
Translates to: QGPGLQVGNTSQKASVGLRKGGP*VCKTGR
Trigger: GCGTCCCGTCTTGCACACCCAGGGGCCTCCCTTTCT...CAGGCCTACTGATGCTTTTTGGGAAGTGTTCCCAACTTGGAGTCCTGGTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGGGGAACAACAGTTGCTTTTaGCTGCTGGAAGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: EAGEKAACSQTAWARGRGNNSCF*LLEAVA
Trigger: AGCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTT...CCCCCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGAGACATAGCCACCAGCTTCCAGGCCATCCAGGGCCCCGGGTCGCCTTGGGATAACAACAGTTGCTTTTaGCTGCTGGAAGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: GDIATSFQAIQGPGSPWDNNSCF*LLEAVA
Trigger: AGCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTT...ATCCCAAGGCGACCCGGGGCCCTGGATGGCCTGGAAGCTGGTGGCTATGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGCTATCTCCTGCAGGTaGAGAAAGAAACAGAAGTTA +
Preference number: 4 (lower is better)
Translates to: REGGTQQRPAGPRSTAVQAISCR*RKKQKL
Trigger: TAACTTCTGTTTCTTTCTCCACCTGCAGGAGATAGC...CTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGAGCTCTCACTCCCACTaGCCTCCCTCCCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMSSHSH*PPSREP
Trigger: GGGCTCCCGGGAGGGAGGCCAGTGGGAGTGAGAGCT...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CAA 72 bp CCGCTTCACCGGGATGGGTTCCCACGTCCCTCCGCGTaGACCCACAGCTTCCTTACGGTCTTGTATGTAGTT +
Preference number: 4 (lower is better)
Translates to: PLHRDGFPRPSA*THSFLTVLYVV
Trigger: AACTACATACAAGACCGTAAGGAAGCTGTGGGTCAACGCGGAGGGACGTGGGAACCCATCCCGGTGAAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGCTGAGCTGCCGCTGTaGCAGGGACAAGGTACCATC +
Preference number: 4 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALAELPL*QGQGTI
Trigger: GATGGTACCTTGTCCCTGTCACAGCGGCAGCTCAGC...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GGGTGGTGGAGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTCCTCCCAGGCTCCAGTaGTCCTCCTGCCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: GWWRGFYLQCLGFDSTNCPPRLQ*SSCLSL
Trigger: GAGGCTAAGGCAGGAGGATCACTGGAGCCTGGGAGG...ACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCTCCACCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGCTGGGAGAAAGGACGTaGCGCTGCCGCTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMLGERT*RCRFTG
Trigger: CCCGGTGAAGCGGCAGCGTCACGTCCTTTCTCCCAG...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp AAGTCTGGAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTTGCCCCAGCGCTGGCTaGCGCCATCTCGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KSGSLWRACHLKGKDSLFCPSAG*RHLGFF
Trigger: GAAGAAGCCGAGATGGCGGCAGCCAGCGCTGGGGCA...AAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGTCCTCCTCGCTGAGCTaGCGCTGTGACAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGSSSLS*RCDRDK
Trigger: CTTGTCCCTGTCACAGCGGCAGCTCAGCGAGGAGGA...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCACCGGCCACATCCACGTaGAGGGTCAGCTGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPPATST*RVSWSD
Trigger: GTCGGACCAGCTGACCCTGCACGTGGATGTGGCCGG...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp TCGTCGATGTTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGGCTGTGGTGGGCGGCTaGAGCTGCACCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SSMFLNRLTGRVAHSKGPAVVGG*SCTEVL
Trigger: CAACACCTCGGTGCAGCTGCAGCCGCCCACCACAGC...CGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAACATCGACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGTGCCAAAACAACAGTTaGTTTTGGCTGCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWCQNNS*FWLLEA
Trigger: AGCTTCCAGCAGCCAAAAGCAACTGTTGTTTTGGCA...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp ACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGACCTGTTTGGGAGATTaGATTTCCAGGAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: TEAGEKAACSQTAWARGRTCLGD*ISRKWA
Trigger: GGCCCATTTCCTGGAAATGCAATCTCCCAAACAGGT...CCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp CAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGGGGTTGCCCCAGCGCTaGCTGCCGCCATCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: QACTSGPSCQNNSCFWLLGLPQR*LPPSRL
Trigger: AAGCCGAGATGGCGGCAGCCAGCGCTGGGGCAACCC...CAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTCGCCGTCTCAGGGCCTaGGGCTGTGGTGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QSSLYIRTVLPKQQLLLARRLRA*GCGGRL
Trigger: CAGCCGCCCACCACAGCCCCAGGCCCTGAGACGGCG...AGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGGGGTTCTTGGCCTTCTaGGCCTGTTCCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLGFLAF*ACSISR
Trigger: CCTGGAGATGGAACAGGCCCAGAAGGCCAAGAACCC...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTAAGGACTTCTGCTCCTaGGGGTTCTTGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRKDFCS*GFLAFW
Trigger: CCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTT...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGAAGTTGGCACTGTCATCGATCTCAAATGAGTGCTCCAGCAGCAGCCCCACCGAAGGACTTCTGCTCCTaGGGGTTCTTGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GSWHCHRSQMSAPAAAPPKDFCS*GFLAFW
Trigger: CCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTT...CGGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGATGACAGTGCCAACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTATGTACATCCAGTATTTaGCGAAGAAGGACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVCTSSI*RRRTSA
Trigger: AGCAGAAGTCCTTCTTCGCCAAATACTGGATGTACA...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334976.11
ENST00000598585.1
ENST00000599293.1
CDS-3UTR CCA 90 bp GCCAGTATTTGGCGAAGAAGGACTTCTGCTCCTGGGGGTTCTTGGCCTTCTGGGCAAAGGCACAGAGGCTaGAGAGAAGGCGGCATGTTC +
Preference number: 4 (lower is better)
Translates to: ASIWRRRTSAPGGSWPSGQRHRG*REGGMF
Trigger: GAACATGCCGCCTTCTCTCCAGCCTCTGTGCCTTTG...CCCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGCCAAATACTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS-3UTR CCA 90 bp GGCTGCACTAGGCGTCGGGCCCAGAAGCCCCCGGCCATCCAGCCCCGACTCTTTTTCATACTTCATCCCTaGATAACCCGGTCAATAAAA +
Preference number: 4 (lower is better)
Translates to: GCTRRRAQKPPAIQPRLFFILHP*ITRSIK
Trigger: TTTTATTGACCGGGTTATCCAGGGATGAAGTATGAA...AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGACGCCTAGTGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCAGCCCAGGAGGCAGCTaGGGCCATGAGTCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALSPGGS*GHESGD
Trigger: ATCTCCAGACTCATGGCCCCAGCTGCCTCCTGGGCT...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp AGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGGATGTTGGGGGCTaGGAGGCCAAAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RQGFLVCTRQTNVKPRPQGDVGG*EAKEEA
Trigger: AGCCTCCTCTTTGGCCTCCCAGCCCCCAACATCCCC...CTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCCATCAGGCCTCCTGTaGCGGTGGCGCGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CHLKGKDSLFAPGRQMSNPSGLL*RWRGPW
Trigger: CCAGGGCCCGCGCCACCGCCACAGGAGGCCTGATGG...GTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376918.7
ENST00000601780.5
CDS-3UTR TCA 90 bp AGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTTGGTTTTGTCCCGCTCCTCCTCGCTaGGCTGCCGCTGTGACAGGG +
Preference number: 4 (lower is better)
Translates to: RGFYLQCLGFDSTNCWFCPAPPR*AAAVTG
Trigger: CCCTGTCACAGCGGCAGCTCAGCGAGGAGGAGCGGG...ACAAAACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGGTGTCTGGCGCTCCTaGCATCATGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGGVWRS*HHEEQD
Trigger: GTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACC...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGGTGTCTGGCGCTCCTaGCATCATGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: EACGGPVTLKARIPCLHQGVWRS*HHEEQD
Trigger: GTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACC...CTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGGTATCAAGTGAGCAGTaGATTTCAATCAAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GAGDTGCCAKGPSPAAPLVSSEQ*ISIKLV
Trigger: TACAAGCTTGATTGAAATTCACTGCTCACTTGATAC...CAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp ACCAGGAGGCAGGAGTCCATACCGAGGCCCAAACAGGCTAGCCCTGAGCAGGGCCCTCTAGGAAAAGAATaGAGCAGGATTCACATGGAA +
Preference number: 4 (lower is better)
Translates to: TRRQESIPRPKQASPEQGPLGKE*SRIHME
Trigger: TTCCATGTGAATCCTGCTTCATTCTTTTCCTAGAGG...GCCCTGCTCAGGGCTAGCCTGTTTGGGCCTCGGTATGGACTCCTGCCTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGCTCGACTGGGCGCTaGTACCGCCATCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPGSTGR*YRHQQE
Trigger: CTCTTGCTGATGGCGGTAGCAGCGCCCAGTCGAGCC...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp TGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACGCAGCAGCCCCACCGTaGCACAGGCCTCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: CHLKGKDSLFAPGRQMSNAAAPP*HRPRPL
Trigger: GAGAGGGCGAGGCCTGTGGCACGGTGGGGCTGCTGC...GTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AAGTCTGGAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGTGGGCGGCTGCAGCTaGACCGAGGTGTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: KSGSLWRACHLKGKDSLFVGGCS*TEVLNS
Trigger: GCTGTTCAACACCTCGGTGCAGCTGCAGCCGCCCAC...AAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp TCGTCGATGTTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGAGACACCGGCTGCTGTaGCAAAGGCCCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSMFLNRLTGRVAHSKGPRHRLL*QRPQSS
Trigger: GCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCT...CGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAACATCGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGCTCGGGGTAGGGGGATaGGAGGTCAGAACTGGCATA +
Preference number: 4 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGLGVGG*EVRTGI
Trigger: TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAG...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCCAAGGATTCCTTGTTTaGACCAGGCAGACAAATGTC +
Preference number: 4 (lower is better)
Translates to: HGLGVGGCEVRTGIVARIQGFLV*TRQTNV
Trigger: GACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTG...GATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCGTAACAACATTGTTGTaGCTTGCTGACTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HGLGVGGCEVRTGIVARIVTTLL*LADWKV
Trigger: CACCTTCCAGTCAGCAAGGCACAACAATGTTGTTAC...GATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GAGACACCGAGAATGATCTCAACAAAAAGGAACAGTGACCAGAATGCCTGGGGGTGGAGGAATCAGGCCTaGCGTAGGCCCAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: ETPRMISTKRNSDQNAWGWRNQA*RRPRKA
Trigger: CGCCTTCCTGGGCCTACGGCAGGCCTGATTCCTCCA...CCCCCAGGCATTCTGGTCACTGTTCCTTTTTGTTGAGATCATTCTCGGTGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCTTCACCCGTTTCTCTaGTTCCCTCTTCTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRLHPFL*FPLLRA
Trigger: AGCTCGGAGAAGAGGGAAGCAGAGAAACGGGTGAAG...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGAGGTGCGAGGCACCATaGCCGGCCTGTTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGRCEAP*PACSFL
Trigger: GAGAAAAGAACAGGCCGGGCATGGTGCCTCGCACCT...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TGCCAGTATTTGGCGAAGAAGGACTTCTGCTCCTGGGGGTTCTTGGCCTTCTGGAAGGTACCATCCTGCTaGTTCCAGAGCAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: CQYLAKKDFCSWGFLAFWKVPSC*FQSSEP
Trigger: GGGCTCACTGCTCTGGAACCAGCAGGATGGTACCTT...CCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGCCAAATACTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS-3UTR CCA 90 bp AGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTTGGTTTTGTGGCCCCGGGTCGCCTTaGGATCCGGACCCGGTACAG +
Preference number: 4 (lower is better)
Translates to: RGFYLQCLGFDSTNCWFCGPGSP*DPDPVQ
Trigger: CTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCC...ACAAAACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGACGTGCAGGGTCAGCTaGTCCGACAGGTGCGACTCC +
Preference number: 4 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMTCRVS*SDRCDS
Trigger: GGAGTCGCACCTGTCGGACCAGCTGACCCTGCACGT...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAAGAAAGGGAGGCCCCTaGGTGTGCAAGACGGGACGC +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPRKGGP*VCKTGR
Trigger: GCGTCCCGTCTTGCACACCCAGGGGCCTCCCTTTCT...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTATGCGAGGTCAGAACTaGCATAGTGGCCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRMRGQN*HSGQDL
Trigger: GAGATCCTGGCCACTATGCCAGTTCTGACCTCGCAT...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCAAAGTCTGGAAGCCTGTaGAGGGCCTGTCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: NRLTGRVAHSKGPQALVAKSGSL*RACHLK
Trigger: TTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT...TGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CCCTGGCCCCCGGTGTCTGGCGCTCCTGACATCATGAGGAACAGGACGACGGGATCTATTTACAGTGTCTaGGCTTTGACTCCACTAACT +
Preference number: 4 (lower is better)
Translates to: PWPPVSGAPDIMRNRTTGSIYSV*ALTPLT
Trigger: AGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGA...TCCCGTCGTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACCGGGGGCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GCACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAAGCTCAGGCATTTCCTaGAATACCCAACAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: AQRLERRRHVPRLHGLGVSSGIS*NTQQSN
Trigger: GTTACTCTGTTGGGTATTCCAGGAAATGCCTGAGCT...TACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGTCTGGTGGCAGGAAATaGGAGGGAGCAACCCCTCCT +
Preference number: 4 (lower is better)
Translates to: EACGGPVTLKARIPCLHQSGGRK*EGATPP
Trigger: AGGAGGGGTTGCTCCCTCCCATTTCCTGCCACCAGA...CTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCATGAAACCCTAGGCTaGGAAGAGGAAGGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRHETLG*EEEGFR
Trigger: GCGAAAGCCTTCCTCTTCCCAGCCTAGGGTTTCATG...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGTTGCTGACTGGAAGGTaGGTACAAATAAAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWLLTGR*VQIKED
Trigger: ATCCTCCTTTATTTGTACCCACCTTCCAGTCAGCAA...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GAGGACACAGGGGACTCCAGCAGAAAGGGAGGCCCCTGGGTGTGCAAGACGGGATCACACAAACCTGTTTaGGAGATTGCATTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: EDTGDSSRKGGPWVCKTGSHKPV*EIAFPG
Trigger: TCCTGGAAATGCAATCTCCCAAACAGGTTTGTGTGA...TCCCGTCTTGCACACCCAGGGGCCTCCCTTTCTGCTGGAGTCCCCTGTGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp AAGTCTGGAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTAAGGGCCGGCCACGGTaGCTCAACGCCTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: KSGSLWRACHLKGKDSLFKGRPR*LNACNP
Trigger: GGGATTACAGGCGTTGAGCCACCGTGGCCGGCCCTT...AAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCTCTACTACAGGACGACGGGAATaGTGTACATCCAGTATTTGG +
Preference number: 4 (lower is better)
Translates to: VGGCEVRTGIVARISGSTTGRRE*CTSSIW
Trigger: CCAAATACTGGATGTACATCATTCCCGTCGTCCTGT...AGTAGAGCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334976.11
ENST00000599293.1
CDS-3UTR TCA 90 bp GGGTGGTGGAGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTGGTGTCTGGCGCTCCTaGCATCATGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: GWWRGFYLQCLGFDSTNCGVWRS*HHEEQD
Trigger: GTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACC...ACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCTCCACCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp TCGTCGATGTTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCCAGGGACAGGAGGGTaGGACCACCTGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: SSMFLNRLTGRVAHSKGPPGTGG*DHLEQR
Trigger: CCTTTGTTCCAGGTGGTCTCACCCTCCTGTCCCTGG...CGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAACATCGACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCGGCATTCCTTGGGTTTCTaGATAACGTATCAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: APGRQMSNHDPRGCTRRRHSLGF*ITYQVS
Trigger: GCTCACTTGATACGTTATTCAGAAACCCAAGGAATG...CCGACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp CTCTCCTACCCTCCTTCCCTCCCTCTTTCTCTCTCCCCCTCCGCACCGCTCCATCACTTGCAAAACTGTTaGCATGTGCATCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LSYPPSLPLSLSPSAPLHHLQNC*HVHLLV
Trigger: AACAAGCAGATGCACATGTCAACAGTTTTGCAAGTG...ATGGAGCGGTGCGGAGGGGGAGAGAGAAAGAGGGAGGGAAGGAGGGTAGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCTCTACTCATATGTGTGCAAAATaGTGCAGCAGAACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VGGCEVRTGIVARISGSTHMCAK*CSRTGG
Trigger: TCCCCCTGTTCTGCTGCATCATTTTGCACACATATG...AGTAGAGCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCCGGCCTGAGGCATTCTaGGTGCGTGGAATCCTCTAT +
Preference number: 4 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALRPEAF*VRGILY
Trigger: ATAGAGGATTCCACGCACTCAGAATGCCTCAGGCCG...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCATCCTCCTCGCTGAGCTaGCGCTGTGACAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPSSSLS*RCDRDK
Trigger: CTTGTCCCTGTCACAGCGGCAGCTCAGCGAGGAGGA...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp TCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTTGCCAAAACAACAGTTaGTTTTGGCTGCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SQTAWARGRGMRGQNWHSCQNNS*FWLLEA
Trigger: AGCTTCCAGCAGCCAAAAGCAACTGTTGTTTTGGCA...ACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCACATCAGGACCGTCTTaGCAAAACAACAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: HGLGVGGCEVRTGIVARITSGPS*QNNSCF
Trigger: AAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGT...GATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp ACCAGGAGGCAGGAGTCCATACCGAGGCCCAAACAGGCTAGCCCTGAGCAGGGCAAAACTGTTGACATGTaGATCTGCTTGTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TRRQESIPRPKQASPEQGKTVDM*ICLFLW
Trigger: CCACAGAAACAAGCAGATGCACATGTCAACAGTTTT...GCCCTGCTCAGGGCTAGCCTGTTTGGGCCTCGGTATGGACTCCTGCCTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGCTCTTCCACACTCATaGACCTCTTCTTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SQTAWARGRGMRGQNWHSALPHS*TSSFLS
Trigger: AGAAAGGAAAGAAGAGGTGCATGAGTGTGGAAGAGC...ACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACGGGTTGCCCCAGCGCTaGCTGCCGCCATCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: CHLKGKDSLFAPGRQMSNGLPQR*LPPSRL
Trigger: AAGCCGAGATGGCGGCAGCCAGCGCTGGGGCAACCC...GTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGGGCCCCGGGTCGCCTTaGGATCCGGACCCGGTACAG +
Preference number: 4 (lower is better)
Translates to: FNQACTSGPSCQNNSCFWGPGSP*DPDPVQ
Trigger: CTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCC...CCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGAAGGACTTCTGCTCCTaGGGGTTCTTGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EACGGPVTLKARIPCLHQKDFCS*GFLAFW
Trigger: CCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTT...CTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGGAGAAAGGGAGGCCCCTaGGTGTGCAAGACGGGACGC +
Preference number: 4 (lower is better)
Translates to: KLVHQDRLAKTTVAFGCWRKGGP*VCKTGR
Trigger: GCGTCCCGTCTTGCACACCCAGGGGCCTCCCTTTCT...CCAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGACTTACAGGGAGGGTaGCACACAGCAAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPDLQGG*HTAKAR
Trigger: GCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTC...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGGGGCCGATGGTCCAGGTaGCAGAGGACGAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: KLVHQDRLAKTTVAFGCWGRWSR*QRTRLE
Trigger: CTCAAGCCTCGTCCTCTGCCACCTGGACCATCGGCC...CCAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp AGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCAGCTGCATTTCCAGGAAATaGGCCAAATTGAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: RRHRLLCQRPQSSCSSASCISRK*AKLSLF
Trigger: AAACAAACTCAATTTGGCCCATTTCCTGGAAATGCA...GCTGGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGAGTGACCAGAATGCCTaGGGGAGGAACAGGGGATAC +
Preference number: 4 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGSDQNA*GRNRGY
Trigger: GTATCCCCTGTTCCTCCCCCAGGCATTCTGGTCACT...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp CAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGTCCTGCCCCGGTCTCTaGGCTGACGCTGTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: QACTSGPSCQNNSCFWLLSCPGL*ADAVLG
Trigger: CCCTAAGACAGCGTCAGCCCAGAGACCGGGGCAGGA...CAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp CAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGGCTGAGCTGCCGCTGTaGCAGGGACAAGGTACCATC +
Preference number: 4 (lower is better)
Translates to: QACTSGPSCQNNSCFWLLAELPL*QGQGTI
Trigger: GATGGTACCTTGTCCCTGTCACAGCGGCAGCTCAGC...CAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGCGCTCCTGACATCATaGGGAACAGGACGACGGGAA +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPALLTS*GTGRRE
Trigger: TTCCCGTCGTCCTGTTCCTCATGATGTCAGGAGCGC...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGGCGCTCCTGACATCATaGGGAACAGGACGACGGGAA +
Preference number: 4 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMALLTS*GTGRRE
Trigger: TTCCCGTCGTCCTGTTCCTCATGATGTCAGGAGCGC...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGGTATCAAGTGAGCAGTaGATTTCAATCAAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWVSSEQ*ISIKLV
Trigger: TACAAGCTTGATTGAAATTCACTGCTCACTTGATAC...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGTCCCAACTCTTCCTCTaGCAACATGAAGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLSQLFL*QHEAPQ
Trigger: CTGAGGTGCTTCATGTTGTCAGAGGAAGAGTTGGGA...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GGGTGGTGGAGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTTCAGTGAGCAGCGGATaGCGCCTTTCTGCTCCATTC +
Preference number: 4 (lower is better)
Translates to: GWWRGFYLQCLGFDSTNCSVSSG*RLSAPF
Trigger: GAATGGAGCAGAAAGGCGTCATCCGCTGCTCACTGA...ACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCTCCACCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp AGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGTCGATCTCAAATGAGTaGTCCAGCAGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: RQGFLVCTRQTNVKPRPQSISNE*SSSSPT
Trigger: GGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGA...CTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GTTTCTGGACGTGGATTCCACTGCATCTTTTGTCTATTCTGGAGACAGGGTCTCTCCTCCTCGCTGAGCTaGCGCTGTGACAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: VSGRGFHCIFCLFWRQGLSSSLS*RCDRDK
Trigger: CTTGTCCCTGTCACAGCGGCAGCTCAGCGAGGAGGA...GAGACCCTGTCTCCAGAATAGACAAAAGATGCAGTGGAATCCACGTCCAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACGCTGTGGTGGGCGGCTaGAGCTGCACCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: CHLKGKDSLFAPGRQMSNAVVGG*SCTEVL
Trigger: CAACACCTCGGTGCAGCTGCAGCCGCCCACCACAGC...GTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAGCAGGAGACACCGGCTaGTGTGCCAAAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PVTLKARIPCLHQADKCQAGDTG*CAKGPS
Trigger: ACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGC...TTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCGGGAAAAGAGCAACACTTaGAAAACTGTTGACATGTGC +
Preference number: 4 (lower is better)
Translates to: APGRQMSNHDPRGCTRRREKSNT*KTVDMC
Trigger: GCACATGTCAACAGTTTTGCAAGTGTTGCTCTTTTC...CCGACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACCCCGCTTCCGGAAGTTaGCACTGTCATCGATCTCAA +
Preference number: 4 (lower is better)
Translates to: CGGPVTLKARIPCLHQADPASGS*HCHRSQ
Trigger: TTGAGATCGATGACAGTGCCAACTTCCGGAAGCGGG...GTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TCGTCGATGTTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGGGGTTCTTGGCCTTCTaGGCCTGTTCCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSMFLNRLTGRVAHSKGPGFLAF*ACSISR
Trigger: CCTGGAGATGGAACAGGCCCAGAAGGCCAAGAACCC...CGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAACATCGACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp CATCATGAGGAACAGGACGACGGGAATGATGTACATCCATCAGGCCTCCTGTGGATGCGAGGTCAGAACTaGCATAGTGGCCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: HHEEQDDGNDVHPSGLLWMRGQN*HSGQDL
Trigger: GAGATCCTGGCCACTATGCCAGTTCTGACCTCGCAT...CCACAGGAGGCCTGATGGATGTACATCATTCCCGTCGTCCTGTTCCTCATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS-3UTR CCA 90 bp AATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCAAACAACAGTTGCTTTTaGCTGCTGGAAGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: NRLTGRVAHSKGPQALVANNSCF*LLEAVA
Trigger: AGCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTT...TGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATATACAGTTTCTGGACGTaGATTCCACTGCATCTTTTG +
Preference number: 4 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGIYSFWT*IPLHLL
Trigger: CAAAAGATGCAGTGGAATCCACGTCCAGAAACTGTA...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp CATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCCTCTTACACCAGAGATaGAATAAGATGGCACCTTAT +
Preference number: 4 (lower is better)
Translates to: HGLGVGGCEVRTGIVARILLHQR*NKMAPY
Trigger: ATAAGGTGCCATCTTATTCCATCTCTGGTGTAAGAG...GATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CAA 72 bp GGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTaGCACCAGGCAGACAAATGTCAAACCACGACCCCA +
Preference number: 4 (lower is better)
Translates to: GGPVTLKARIPC*HQADKCQTTTP
Trigger: TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
3UTR CAA 72 bp GTTGACCCACAGCTTCCTTACGGTCTTGTATGTAGTTaGATGCTTTTAAGGGCCGGCCACGGTGGCTCAACG +
Preference number: 4 (lower is better)
Translates to: VDPQLPYGLVCS*MLLRAGHGGST
Trigger: CGTTGAGCCACCGTGGCCGGCCCTTAAAAGCATCAAACTACATACAAGACCGTAAGGAAGCTGTGGGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGACAGGACGACGGGAATaGTGTACATCCAGTATTTGG +
Preference number: 4 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLTGRRE*CTSSIW
Trigger: CCAAATACTGGATGTACATCATTCCCGTCGTCCTGT...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334976.11
ENST00000598585.1
ENST00000599293.1
CDS-3UTR TCA 90 bp CCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAACCAGGGACAGGAGGGTaGGACCACCTGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: PVTLKARIPCLHQADKCQPGTGG*DHLEQR
Trigger: CCTTTGTTCCAGGTGGTCTCACCCTCCTGTCCCTGG...TTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp TGTGCCTTGCTGACTGGAAGGTGGGTACAAATAAAGGAGGATGGACTGACAGCTAAGCGGAGGTTGCAGTaGGCTGAGATCGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: CALLTGRWVQIKEDGLTAKRRLQ*AEIVPL
Trigger: CAATGGCACGATCTCAGCTCACTGCAACCTCCGCTT...AGCTGTCAGTCCATCCTCCTTTATTTGTACCCACCTTCCAGTCAGCAAGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCGATCTCAAATGAGTaGTCCAGCAGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMSISNE*SSSSPT
Trigger: GGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGA...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CACTTGTTTATAAACGCGTTTCCGATCTGCCATCGTAATTCCATTTTAGTCATGCACGACCCCAGGGGCTaGACTAGGCGTCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HLFINAFPICHRNSILVMHDPRG*TRRRAQ
Trigger: CTGGGCCCGACGCCTAGTGCAGCCCCTGGGGTCGTG...CATGACTAAAATGGAATTACGATGGCAGATCGGAAACGCGTTTATAAACAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GGAAGTTGGCACTGTCATCGATCTCAAATGAGTGCTCCAGCAGCAGCCCCACCGCAAGGATTCCTTGTTTaGACCAGGCAGACAAATGTC +
Preference number: 4 (lower is better)
Translates to: GSWHCHRSQMSAPAAAPPQGFLV*TRQTNV
Trigger: GACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTG...CGGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGATGACAGTGCCAACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CAGGGACCAGGACTCCAAGTTGGGAACACTTCCCAAAAAGCATCAGTAGGCCTGGGAAGGCTTTCGCAATaGCACGCAGCCGATAACATT +
Preference number: 4 (lower is better)
Translates to: QGPGLQVGNTSQKASVGLGRLSQ*HAADNI
Trigger: AATGTTATCGGCTGCGTGGCATTGCGAAAGCCTTCC...CAGGCCTACTGATGCTTTTTGGGAAGTGTTCCCAACTTGGAGTCCTGGTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TCGTCGATGTTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCTCACGCCCCTGCTCTaGGTGTTGGATGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SSMFLNRLTGRVAHSKGPLTPLL*VLDVKR
Trigger: CCTTTTCACATCCAACACGCAGAGCAGGGGCGTGAG...CGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAACATCGACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp CAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTACGTGCAGGGTCAGCTaGTCCGACAGGTGCGACTCC +
Preference number: 4 (lower is better)
Translates to: QSSLYIRTVLPKQQLLLATCRVS*SDRCDS
Trigger: GGAGTCGCACCTGTCGGACCAGCTGACCCTGCACGT...AGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TCGTCGATGTTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGAAGGACTTCTGCTCCTaGGGGTTCTTGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SSMFLNRLTGRVAHSKGPKDFCS*GFLAFW
Trigger: CCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTT...CGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAACATCGACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCATGTACATCCAGTATTTaGCGAAGAAGGACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NRLTGRVAHSKGPQALVACTSSI*RRRTSA
Trigger: AGCAGAAGTCCTTCTTCGCCAAATACTGGATGTACA...TGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334976.11
ENST00000598585.1
ENST00000599293.1
CDS-3UTR CCA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGCAAAGGCACAGAGGCTaGAGAGAAGGCGGCATGTTC +
Preference number: 4 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMQRHRG*REGGMF
Trigger: GAACATGCCGCCTTCTCTCCAGCCTCTGTGCCTTTG...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGTGGACCCGCCGGGTCTaGCAGCCTGTCCCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLWTRRV*QPVPAV
Trigger: TACTGCGGGGACAGGCTGCCAGACCCGGCGGGTCCA...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GGGTGGTGGAGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTAACGTTTCTGCTGCATaGCCGAGTTCCCAACCTGGA +
Preference number: 4 (lower is better)
Translates to: GWWRGFYLQCLGFDSTNCNVSAA*PSSQPG
Trigger: TCCAGGTTGGGAACTCGGCCATGCAGCAGAAACGTT...ACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCTCCACCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTTGGTTTTGTGCTGAGCTGCCGCTGTaGCAGGGACAAGGTACCATC +
Preference number: 4 (lower is better)
Translates to: RGFYLQCLGFDSTNCWFCAELPL*QGQGTI
Trigger: GATGGTACCTTGTCCCTGTCACAGCGGCAGCTCAGC...ACAAAACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCATTCCTTGGGTTTCTaGATAACGTATCAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRHSLGF*ITYQVS
Trigger: GCTCACTTGATACGTTATTCAGAAACCCAAGGAATG...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp GTTTCTGGACGTGGATTCCACTGCATCTTTTGTCTATTCTGGAGACAGGGTCTCATGAGGTTGGGCAGGTaGTGGCACCACTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: VSGRGFHCIFCLFWRQGLMRLGR*WHHSLE
Trigger: TTCCAGTGAGTGGTGCCATCACCTGCCCAACCTCAT...GAGACCCTGTCTCCAGAATAGACAAAAGATGCAGTGGAATCCACGTCCAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp TCGTCGATGTTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCTAAGGTGGATCGCTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SSMFLNRLTGRVAHSKGPLRWIA*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAGCGATCCACCTTAG...CGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAACATCGACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCAGGAAATGGGCCAAATTaGGTTTGTTTCCTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: NRLTGRVAHSKGPQALVAGNGPN*VCFLCN
Trigger: GTTACAAAGGAAACAAACTCAATTTGGCCCATTTCC...TGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGCACAGTGTTACCGGATaGGGAGTCTGGTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RQGFLVCTRQTNVKPRPQHSVTG*GVWSCF
Trigger: AAAGCAAGACCAGACTCCTCATCCGGTAACACTGTG...CTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAACAGGACGACGGGAATaGTGTACATCCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPTGRRE*CTSIRP
Trigger: AGGCCTGATGGATGTACATCATTCCCGTCGTCCTGT...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376918.7
ENST00000601780.5
CDS-3UTR GCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGACAAGGTACCATCCTaGTGGTTCCAGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPDKVPS*WFQSSE
Trigger: CTCACTGCTCTGGAACCAGCAGGATGGTACCTTGTC...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTTGGTTTTGTTCCTCCTCGCTGAGCTaGCGCTGTGACAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: RGFYLQCLGFDSTNCWFCSSSLS*RCDRDK
Trigger: CTTGTCCCTGTCACAGCGGCAGCTCAGCGAGGAGGA...ACAAAACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTTGGTTTTGTGAGGGAACCCGACCTTaGCTGAAGGACCAACAGCGC +
Preference number: 4 (lower is better)
Translates to: RGFYLQCLGFDSTNCWFCEGTRP*LKDQQR
Trigger: GCGCTGTTGGTCCTTCAGGCAAGGTCGGGTTCCCTC...ACAAAACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp CAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTTGTTCCCAGACTGCATaGGCTCGGGGTAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: QSSLYIRTVLPKQQLLLACSQTA*ARGRGM
Trigger: CATCCCCCTACCCCGAGCCCATGCAGTCTGGGAACA...AGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTTGGTTTTGTTGTTCCCAGACTGCATaGGCTCGGGGTAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: RGFYLQCLGFDSTNCWFCCSQTA*ARGRGM
Trigger: CATCCCCCTACCCCGAGCCCATGCAGTCTGGGAACA...ACAAAACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACGACTTACAGGGAGGGTaGCACACAGCAAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: CHLKGKDSLFAPGRQMSNDLQGG*HTAKAR
Trigger: GCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTC...GTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGATGGCACCACTCACTaGAACAAAGATCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPDGTTH*NKDPWR
Trigger: CCTCCAGGGATCTTTGTTCCAGTGAGTGGTGCCATC...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TGTGCCTTGCTGACTGGAAGGTGGGTACAAATAAAGGAGGATGGACTGACAGCTGTGGATTGGCTCCCATaGAAATGCAACTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: CALLTGRWVQIKEDGLTAVDWLP*KCNWDC
Trigger: GCAGTCCCAGTTGCATTTCCATGGGAGCCAATCCAC...AGCTGTCAGTCCATCCTCCTTTATTTGTACCCACCTTCCAGTCAGCAAGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp AGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGAAGTCATTCTATGGGTaGGTGGATTGGCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: RQGFLVCTRQTNVKPRPQKSFYG*VDWLPW
Trigger: CCATGGGAGCCAATCCACCCACCCATAGAATGACTT...CTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACTTTCAAGTCATTCTATaGGTGGGTGGATTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CGGPVTLKARIPCLHQADFQVIL*VGGLAP
Trigger: GGGAGCCAATCCACCCACCCATAGAATGACTTGAAA...GTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp CAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCGCTCCTGACATCATaGGGAACAGGACGACGGGAA +
Preference number: 4 (lower is better)
Translates to: QSSLYIRTVLPKQQLLLAALLTS*GTGRRE
Trigger: TTCCCGTCGTCCTGTTCCTCATGATGTCAGGAGCGC...AGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp AGAGCAACACTTGCAAAACTGTTGACATGTGCATCTGCTTGTTTCTGTGGAGAGAACGCTAGGGGAGCCTaGAGGAGCTCAGGCATTTCC +
Preference number: 4 (lower is better)
Translates to: RATLAKLLTCASACFCGENARGA*RSSGIS
Trigger: GGAAATGCCTGAGCTCCTTCAGGCTCCCCTAGCGTT...CTCTCCACAGAAACAAGCAGATGCACATGTCAACAGTTTTGCAAGTGTTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp TTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGGACACTTCCCTCCATTaGGAGAAGCCACAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: FNQACTSGPSCQNNSCFWDTSLH*EKPQAP
Trigger: CGGCGCCTGTGGCTTCTCTCAATGGAGGGAAGTGTC...CCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp CACTTGTTTATAAACGCGTTTCCGATCTGCCATCGTAATTCCATTTTAGTCATGCCAGGAGTGGGCTCCTaGATCTGCCGATCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HLFINAFPICHRNSILVMPGVGS*ICRSLA
Trigger: GGCCAGGGATCGGCAGATTCAGGAGCCCACTCCTGG...CATGACTAAAATGGAATTACGATGGCAGATCGGAAACGCGTTTATAAACAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp CAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGGACAAGGTACCATCCTaGTGGTTCCAGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QACTSGPSCQNNSCFWLLDKVPS*WFQSSE
Trigger: CTCACTGCTCTGGAACCAGCAGGATGGTACCTTGTC...CAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGTGCCAAAACAACAGTTaGTTTTGGCTGCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGCQNNS*FWLLEA
Trigger: AGCTTCCAGCAGCCAAAAGCAACTGTTGTTTTGGCA...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGGCTGGGAGCACCTAAATaGCCACATGAAACCCTAGGC +
Preference number: 4 (lower is better)
Translates to: KLVHQDRLAKTTVAFGCWLGAPK*PHETLG
Trigger: GCCTAGGGTTTCATGTGGGCATTTAGGTGCTCCCAG...CCAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGAGACAGGAAGCAACTTaGCTAAAGATACACAGCACG +
Preference number: 4 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGRQEAT*LKIHST
Trigger: CGTGCTGTGTATCTTTAGGCAAGTTGCTTCCTGTCT...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGGCTCCTGGGGGTTCTTaGCCTTCTGGGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FNQACTSGPSCQNNSCFWAPGGS*PSGPVP
Trigger: TGGAACAGGCCCAGAAGGCCAAGAACCCCCAGGAGC...CCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GTTTCTGGACGTGGATTCCACTGCATCTTTTGTCTATTCTGGAGACAGGGTCTCATGCGAGGTCAGAACTaGCATAGTGGCCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: VSGRGFHCIFCLFWRQGLMRGQN*HSGQDL
Trigger: GAGATCCTGGCCACTATGCCAGTTCTGACCTCGCAT...GAGACCCTGTCTCCAGAATAGACAAAAGATGCAGTGGAATCCACGTCCAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCAACAACAGTTGCTTTTaGCTGCTGGAAGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALNNSCF*LLEAVA
Trigger: AGCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTT...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGGTGGTGGAGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTACCAGGACTCCAAGTTaGGAACACTTCCCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: GWWRGFYLQCLGFDSTNCTRTPS*EHFPKS
Trigger: GCTTTTTGGGAAGTGTTCCCAACTTGGAGTCCTGGT...ACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCTCCACCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp AGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGAGCCTCCCAAACAGCTaGGACTACAAGCATGAATCA +
Preference number: 4 (lower is better)
Translates to: RQGFLVCTRQTNVKPRPQSLPNS*DYKHES
Trigger: TGATTCATGCTTGTAGTCCCAGCTGTTTGGGAGGCT...CTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGACCTTATACCAGAGATaGAAACTGCCCCAGCTATGT +
Preference number: 4 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGTLYQR*KLPQLC
Trigger: ACATAGCTGGGGCAGTTTCCATCTCTGGTATAAGGT...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCATATGGGTGGGTGGATTaGCTCCCATGGAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPYGWVD*LPWKCN
Trigger: GTTGCATTTCCATGGGAGCCAATCCACCCACCCATA...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp AAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGGTCGCTGTCCTCTCTGTaGCCACCCTCCTTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: KLVHQDRLAKTTVAFGCWSLSSL*PPSFFS
Trigger: TGAGAAAAAGGAGGGTGGCCACAGAGAGGACAGCGA...CCAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAACAGGACGACGGGAATaGTGTACATCCAGTATTTGG +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPTGRRE*CTSSIW
Trigger: CCAAATACTGGATGTACATCATTCCCGTCGTCCTGT...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334976.11
ENST00000598585.1
ENST00000599293.1
CDS-3UTR TCA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGCCAGGGACAGGAGGGTaGGACCACCTGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLPGTGG*DHLEQR
Trigger: CCTTTGTTCCAGGTGGTCTCACCCTCCTGTCCCTGG...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTGTATCAAGTGAGCAGTaGATTTCAATCAAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRVSSEQ*ISIKLV
Trigger: TACAAGCTTGATTGAAATTCACTGCTCACTTGATAC...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp ATCCAGTATTTGGCGAAGAAGGACTTCTGCTCCTGGGGGTTCTTGGCCTTCTGGCATTCCTTGGGTTTCTaGATAACGTATCAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: IQYLAKKDFCSWGFLAFWHSLGF*ITYQVS
Trigger: GCTCACTTGATACGTTATTCAGAAACCCAAGGAATG...CCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGCCAAATACTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599293.1
CDS-3UTR TCA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGCCATGGAGACAGAGGTaGCGGGATGAGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLPWRQR*RDEARK
Trigger: CTTCCTGGCCTCATCCCGTCACCTCTGTCTCCATGG...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp CCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAGACAAGGTACCATCCTaGTGGTTCCAGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PVTLKARIPCLHQADKCQDKVPS*WFQSSE
Trigger: CTCACTGCTCTGGAACCAGCAGGATGGTACCTTGTC...TTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp GTTTCTGGACGTGGATTCCACTGCATCTTTTGTCTATTCTGGAGACAGGGTCTCGGGGGACTCCTGCAGTaGTGCTTAGAACTACTCAAA +
Preference number: 4 (lower is better)
Translates to: VSGRGFHCIFCLFWRQGLGGLLQ*CLELLK
Trigger: TTTGAGTAGTTCTAAGCAGCACTGCAGGAGTCCCCC...GAGACCCTGTCTCCAGAATAGACAAAAGATGCAGTGGAATCCACGTCCAGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TGGAAATGCAACTGGGACTGCACATGGGAAACAAAGGAAAATGGAATTTGGTTCCGCACCTTCCACAGCTaGTCTGTTCCTCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: WKCNWDCTWETKENGIWFRTFHS*SVPPHP
Trigger: AGGATGGGGAGGAACAGAGCAGCTGTGGAAGGTGCG...GAACCAAATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp CCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACGCACCCCGCCTGTTaGTTCTCTCATTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PVTLKARIPCLHQADKCQTHPAC*FSHSPV
Trigger: AACTGGAGAATGAGAGAAGCAACAGGCGGGGTGCGT...TTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGGGGTTCTTGGCCTTCTaGGCCTGTTCCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FNQACTSGPSCQNNSCFWGFLAF*ACSISR
Trigger: CCTGGAGATGGAACAGGCCCAGAAGGCCAAGAACCC...CCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGTCTATTTACAGTGTCTaGGCTTTGACTCCACTAACT +
Preference number: 4 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLSIYSV*ALTPLT
Trigger: AGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGA...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCCTGAGGCCCAGGAGTaGACAGACCTTTGTGACACC +
Preference number: 4 (lower is better)
Translates to: FNQACTSGPSCQNNSCFWPEAQE*TDLCDT
Trigger: GGTGTCACAAAGGTCTGTCCACTCCTGGGCCTCAGG...CCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp AAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGGTTTCTGTCTTGTCATTaGCTCTCCCGCCCTCCTACA +
Preference number: 4 (lower is better)
Translates to: KLVHQDRLAKTTVAFGCWFLSCH*LSRPPT
Trigger: TGTAGGAGGGCGGGAGAGCCAATGACAAGACAGAAA...CCAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp CACTTGTTTATAAACGCGTTTCCGATCTGCCATCGTAATTCCATTTTAGTCATGGCTGAGCTGCCGCTGTaGCAGGGACAAGGTACCATC +
Preference number: 4 (lower is better)
Translates to: HLFINAFPICHRNSILVMAELPL*QGQGTI
Trigger: GATGGTACCTTGTCCCTGTCACAGCGGCAGCTCAGC...CATGACTAAAATGGAATTACGATGGCAGATCGGAAACGCGTTTATAAACAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp TTCCGGAAGTTGGCACTGTCATCGATCTCAAATGAGTGCTCCAGCAGCAGCCCCGTATCAAGTGAGCAGTaGATTTCAATCAAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: FRKLALSSISNECSSSSPVSSEQ*ISIKLV
Trigger: TACAAGCTTGATTGAAATTCACTGCTCACTTGATAC...GGGGCTGCTGCTGGAGCACTCATTTGAGATCGATGACAGTGCCAACTTCCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCCACACAACACAGCTaGGCTCCACACAGCCACATG +
Preference number: 4 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLATQHS*APHSHM
Trigger: CATGTGGCTGTGTGGAGCTCAGCTGTGTTGTGTGGC...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp CAGGGACCAGGACTCCAAGTTGGGAACACTTCCCAAAAAGCATCAGTAGGCCTGATGAGACACCGAGAATaGTCTCAACAAAAAGGAACA +
Preference number: 4 (lower is better)
Translates to: QGPGLQVGNTSQKASVGLMRHRE*SQQKGT
Trigger: TGTTCCTTTTTGTTGAGATCATTCTCGGTGTCTCAT...CAGGCCTACTGATGCTTTTTGGGAAGTGTTCCCAACTTGGAGTCCTGGTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp CAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGTCTGCGTGTTGGATGTaGAAAGGATGTCAGGGACTA +
Preference number: 4 (lower is better)
Translates to: QACTSGPSCQNNSCFWLLSACWM*KGCQGL
Trigger: TAGTCCCTGACATCCTTTTCACATCCAACACGCAGA...CAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp CAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTTTCGTACTCTGCGTCTaGTTTTCCAGCAGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: QSSLYIRTVLPKQQLLLAFVLCV*FSSSEA
Trigger: GGCTTCGCTGCTGGAAAATCAGACGCAGAGTACGAA...AGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGCTCGGGGTAGGGGGATaGGAGGTCAGAACTGGCATA +
Preference number: 4 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLLGVGG*EVRTGI
Trigger: TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAG...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp AGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTTGGTTTTGTAAGATGTTCCCCCAGTaGCGGGGTAGAAGACATCTG +
Preference number: 4 (lower is better)
Translates to: RGFYLQCLGFDSTNCWFCKMFPQ*RGRRHL
Trigger: CAGATGTCTTCTACCCCGGCACTGGGGGAACATCTT...ACAAAACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TGGAAATGCAACTGGGACTGCACATGGGAAACAAAGGAAAATGGAATTTGGTTCAGGGAACGTTTCTGCTaGATGGCCGAGTTCCCAACC +
Preference number: 4 (lower is better)
Translates to: WKCNWDCTWETKENGIWFRERFC*MAEFPT
Trigger: GGTTGGGAACTCGGCCATGCAGCAGAAACGTTCCCT...GAACCAAATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp ATTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTTGTTCCCAGACTGCATaGGCTCGGGGTAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: ISIKLVHQDRLAKTTVAFCSQTA*ARGRGM
Trigger: CATCCCCCTACCCCGAGCCCATGCAGTCTGGGAACA...AAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp ATCCAGTATTTGGCGAAGAAGGACTTCTGCTCCTGGGGGTTCTTGGCCTTCTGGTCTATTTACAGTGTCTaGGCTTTGACTCCACTAACT +
Preference number: 4 (lower is better)
Translates to: IQYLAKKDFCSWGFLAFWSIYSV*ALTPLT
Trigger: AGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGA...CCAGAAGGCCAAGAACCCCCAGGAGCAGAAGTCCTTCTTCGCCAAATACTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599293.1
CDS-3UTR CCA 90 bp ATTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGACTTACAGGGAGGGTaGCACACAGCAAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: ISIKLVHQDRLAKTTVAFDLQGG*HTAKAR
Trigger: GCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTC...AAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAAACAACAGTTGCTTTTaGCTGCTGGAAGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPNNSCF*LLEAVA
Trigger: AGCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTT...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CCA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTAAGGAAAATGGAATTTaGTTCACACAAACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRKENGI*FTQTCL
Trigger: CAAACAGGTTTGTGTGAACCAAATTCCATTTTCCTT...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TGTGCCTTGCTGACTGGAAGGTGGGTACAAATAAAGGAGGATGGACTGACAGCTTTTATAACCATACAATaGAGGAGGCTAGCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: CALLTGRWVQIKEDGLTAFITIQ*RRLAAC
Trigger: ACACGCAGCTAGCCTCCTGCATTGTATGGTTATAAA...AGCTGTCAGTCCATCCTCCTTTATTTGTACCCACCTTCCAGTCAGCAAGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp AGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTTGGTTTTGTAATACAAAAACTAGCTaGGCGTGGTGGTGCACGCCT +
Preference number: 4 (lower is better)
Translates to: RGFYLQCLGFDSTNCWFCNTKTS*AWWCTP
Trigger: AGGCGTGCACCACCACGCGCAGCTAGTTTTTGTATT...ACAAAACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGTTGACATGTGCATCTaGTTGTTTCTGTGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPVDMCI*LFLWRV
Trigger: TACTCTCCACAGAAACAAGCAGATGCACATGTCAAC...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCATGTACATCCAGTATTTaGCGAAGAAGGACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPCTSSI*RRRTSA
Trigger: AGCAGAAGTCCTTCTTCGCCAAATACTGGATGTACA...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334976.11
ENST00000598585.1
ENST00000599293.1
CDS-3UTR CCA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGCACAGAAGGATGGGTTaGGACTCTATCCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLHRRMG*DSILGE
Trigger: CTCCCCCAGGATAGAGTCCCAACCCATCCTTCTGTG...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp CCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAGGCATTCTGAGTGCGTaGAATCCTCTATTACCACCT +
Preference number: 4 (lower is better)
Translates to: PVTLKARIPCLHQADKCQGILSA*NPLLPP
Trigger: AGGTGGTAATAGAGGATTCCACGCACTCAGAATGCC...TTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp ATTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGTCATCGATCTCAAATaGGTGCTCCAGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ISIKLVHQDRLAKTTVAFVIDLK*VLQQQP
Trigger: GGGCTGCTGCTGGAGCACTCATTTGAGATCGATGAC...AAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR TCA 90 bp TTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGAACAAAAAGGAACAGTaGCCAGAATGCCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FNQACTSGPSCQNNSCFWNKKEQ*PECLGE
Trigger: CTCCCCCAGGCATTCTGGTCACTGTTCCTTTTTGTT...CCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp AGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGATTCCATTTCAGAAATaGGAAAATTGGTGCCCAATG +
Preference number: 4 (lower is better)
Translates to: RQGFLVCTRQTNVKPRPQIPFQK*ENWCPM
Trigger: CATTGGGCACCAATTTTCTCATTTCTGAAATGGAAT...CTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp AAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAAACGCGTTTCCGATCTaGCATCGTAATTCCATTTTA +
Preference number: 4 (lower is better)
Translates to: KARIPCLHQADKCQTTTPNAFPI*HRNSIL
Trigger: TAAAATGGAATTACGATGGCAGATCGGAAACGCGTT...TGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp GAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGTATTTTAGGATTGTTTaGCATGCAACTATGTACTGG +
Preference number: 4 (lower is better)
Translates to: EACGGPVTLKARIPCLHQYFRIV*HATMYW
Trigger: CCAGTACATAGTTGCATGGCAAACAATCCTAAAATA...CTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCATGCAACTATGTACTaGGAGCACCTAAATGCCCAC +
Preference number: 4 (lower is better)
Translates to: CHLKGKDSLFAPGRQMSNHATMY*EHLNAH
Trigger: GTGGGCATTTAGGTGCTCCCAGTACATAGTTGCATG...GTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CAA 72 bp CCTCCTGGTCTTGACAGTCGACTCACAAACCATCACTaGTTTATAAACGCGTTTCCGATCTGCCATCGTAAT +
Preference number: 4 (lower is better)
Translates to: PPGLDSRLTNHH*FINAFPICHRN
Trigger: ATTACGATGGCAGATCGGAAACGCGTTTATAAACAAGTGATGGTTTGTGAGTCGACTGTCAAGACCAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR TCA 90 bp TGGAAATGCAACTGGGACTGCACATGGGAAACAAAGGAAAATGGAATTTGGTTCATTGTTGTGCCTTGCTaGCTGGAAGGTGGGTACAAA +
Preference number: 4 (lower is better)
Translates to: WKCNWDCTWETKENGIWFIVVPC*LEGGYK
Trigger: TTTGTACCCACCTTCCAGTCAGCAAGGCACAACAAT...GAACCAAATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp ATTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGACAAGGTACCATCCTaGTGGTTCCAGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: ISIKLVHQDRLAKTTVAFDKVPS*WFQSSE
Trigger: CTCACTGCTCTGGAACCAGCAGGATGGTACCTTGTC...AAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CAA 72 bp AGTGAATTTCAATCAAGCTTGTACATCAGGACCGTCTaGCCAAAACAACAGTTGCTTTTGGCTGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SEFQSSLYIRTV*PKQQLLLAAGS
Trigger: GCTTCCAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAATTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
3UTR CAA 72 bp CATGAATCACTATGCCTGGCCAACCTACTCTATCTTTaGAGTTTCATACTTCATCCCTGGATAACCCGGTCA +
Preference number: 4 (lower is better)
Translates to: HESLCLANLLYL*SFILHPWITRS
Trigger: TGACCGGGTTATCCAGGGATGAAGTATGAAACTCAAAAGATAGAGTAGGTTGGCCAGGCATAGTGATTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TGGAAATGCAACTGGGACTGCACATGGGAAACAAAGGAAAATGGAATTTGGTTCAATACAAAAATTGGCTaGGTGTGGTGGCACACGGTT +
Preference number: 4 (lower is better)
Translates to: WKCNWDCTWETKENGIWFNTKIG*VWWHTV
Trigger: AACCGTGTGCCACCACACCCAGCCAATTTTTGTATT...GAACCAAATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR GCA 90 bp TTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGTGCCAAAACAACAGTTaGTTTTGGCTGCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: FQSSLYIRTVLPKQQLLLCQNNS*FWLLEA
Trigger: AGCTTCCAGCAGCCAAAAGCAACTGTTGTTTTGGCA...CAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTACAGACACATATGTGTaGAAAATGATGCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: QSSLYIRTVLPKQQLLLATDTYV*KMMQQN
Trigger: GTTCTGCTGCATCATTTTGCACACATATGTGTCTGT...AGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp TTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGTCTATTTACAGTGTCTaGGCTTTGACTCCACTAACT +
Preference number: 4 (lower is better)
Translates to: FNQACTSGPSCQNNSCFWSIYSV*ALTPLT
Trigger: AGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGA...CCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR GCA 90 bp CACTTGTTTATAAACGCGTTTCCGATCTGCCATCGTAATTCCATTTTAGTCATGACATCAGGACCGTCTTaGCAAAACAACAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: HLFINAFPICHRNSILVMTSGPS*QNNSCF
Trigger: AAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGT...CATGACTAAAATGGAATTACGATGGCAGATCGGAAACGCGTTTATAAACAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CCA 90 bp CACTTGTTTATAAACGCGTTTCCGATCTGCCATCGTAATTCCATTTTAGTCATGTTGTGCCTTGCTGACTaGAAGGTGGGTACAAATAAA +
Preference number: 4 (lower is better)
Translates to: HLFINAFPICHRNSILVMLCLAD*KVGTNK
Trigger: TTTATTTGTACCCACCTTCCAGTCAGCAAGGCACAA...CATGACTAAAATGGAATTACGATGGCAGATCGGAAACGCGTTTATAAACAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
3UTR CAA 72 bp ATAACGTATCAAGTGAGCAGTGAATTTCAATCAAGCTaGTACATCAGGACCGTCTTGCCAAAACAACAGTTG +
Preference number: 4 (lower is better)
Translates to: ITYQVSSEFQSS*YIRTVLPKQQL
Trigger: CAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAATTCACTGCTCACTTGATACGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS CCA 90 bp ACGCCGGGAGGAACAGGCCGCATCCTGACGCCCGTGCGCCTGCGCTaGGCCCCGGCACCTGCGCACTGGCACCCGTCCGCACCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: TPGGTGRILTPVRLR*APAPAHWHPSAPGA
Trigger: GGCCCCAGGTGCGGACGGGTGCCAGTGCGCAGGTGCCGGGGCCCAGCGCAGGCGCACGGGCGTCAGGATGCGGCCTGTTCCTCCCGGCGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS GCA 90 bp ACCAGTCCCGGCCCGGCAGCCGCTGCCCCGGGCTCGACTGGGCGCTaGTACCGCCATCAGCAAGAGCAGGAGCAGCCGGGTTGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: TSPGPAAAAPGSTGR*YRHQQEQEQPGCPS
Trigger: GCTGGGGCAACCCGGCTGCTCCTGCTCTTGCTGATGGCGGTAGCAGCGCCCAGTCGAGCCCGGGGCAGCGGCTGCCGGGCCGGGACTGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS CCA 90 bp CTCGCGCACCAGTCCCGGCCCGGCAGCCGCTGCCCCGGGCTCGACTaGGCGCTGCTACCGCCATCAGCAAGAGCAGGAGCAGCCGGGTTG +
Preference number: 5 (lower is better)
Translates to: LAHQSRPGSRCPGLD*ALLPPSARAGAAGL
Trigger: CAACCCGGCTGCTCCTGCTCTTGCTGATGGCGGTAGCAGCGCCCAGTCGAGCCCGGGGCAGCGGCTGCCGGGCCGGGACTGGTGCGCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS TCA 90 bp GGCTGCCGCCATCTCGGCTTCTTCCCACCAGCGAAGGGACGGCTGTaGGCCAAGAGCCGCGGAGCACGCCGGGAGGAACAGGCCGCATCC +
Preference number: 5 (lower is better)
Translates to: GCRHLGFFPPAKGRL*AKSRGARREEQAAS
Trigger: GGATGCGGCCTGTTCCTCCCGGCGTGCTCCGCGGCTCTTGGCTCACAGCCGTCCCTTCGCTGGTGGGAAGAAGCCGAGATGGCGGCAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS-3UTR CAA 90 bp CTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGGGGCCCCGGGTCGCCTaGGGATCCGGACCCGGTACA +
Preference number: 5 (lower is better)
Translates to: LHGLGVGGCEVRTGIVARGPRVA*GSGPGT
Trigger: TGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCC...CCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp TGTTCCATCTCCAGGCGCTCAATGAAGGCCGCCGTCTCAGGGCCTGGGGCTGTGGGGCCCCGGGTCGCCTaGGGATCCGGACCCGGTACA +
Preference number: 5 (lower is better)
Translates to: CSISRRSMKAAVSGPGAVGPRVA*GSGPGT
Trigger: TGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCC...CACAGCCCCAGGCCCTGAGACGGCGGCCTTCATTGAGCGCCTGGAGATGGAACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCGGGGGCCCCGGGTCGCCTaGGGATCCGGACCCGGTACA +
Preference number: 5 (lower is better)
Translates to: APGRQMSNHDPRGCTRRRGPRVA*GSGPGT
Trigger: TGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCC...CCGACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGACACGCCCACCACGTaGCCGGCCACATCCACGTGC +
Preference number: 5 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVDTPTT*PATSTC
Trigger: GCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGTC...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GGCTGCACTAGGCGTCGGGCCCAGAAGCCCCCGGCCATCCAGCCCCGACTCTTTCCACGTCCCTCCGCGTaGACCCACAGCTTCCTTACG +
Preference number: 5 (lower is better)
Translates to: GCTRRRAQKPPAIQPRLFPRPSA*THSFLT
Trigger: CGTAAGGAAGCTGTGGGTCAACGCGGAGGGACGTGG...AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGACGCCTAGTGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS GCA 90 bp AGCACAGCAGGGCTCAGCCATCCCAGCCTCAGCATCCTCCTAGCCTaGCTCGGGCCACACAGACCTCTTCGCTGGCCTTGGCCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: STAGLSHPSLSILLA*LGPHRPLRWPWPAW
Trigger: CCAGGCAGGCCAAGGCCAGCGAAGAGGTCTGTGTGGCCCGAGGCAGGCTAGGAGGATGCTGAGGCTGGGATGGCTGAGCCCTGCTGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS-3UTR CAA 90 bp TCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGGCCCCGGGTCGCCTaGGGATCCGGACCCGGTACA +
Preference number: 5 (lower is better)
Translates to: SQTAWARGRGMRGQNWHSGPRVA*GSGPGT
Trigger: TGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCC...ACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GAGGACACAGGGGACTCCAGCAGAAAGGGAGGCCCCTGGGTGTGCAAGACGGGAGACACGCCCACCACGTaGCCGGCCACATCCACGTGC +
Preference number: 5 (lower is better)
Translates to: EDTGDSSRKGGPWVCKTGDTPTT*PATSTC
Trigger: GCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGTC...TCCCGTCTTGCACACCCAGGGGCCTCCCTTTCTGCTGGAGTCCCCTGTGTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS CCA 90 bp GCAAGGGCTCAGCCTCTGGGCCTCAGTTCCCTGCAGCACAACTGTTaGACTATCCAGGCGGAGCGGGTGAGGCCCTCAGGCAGGGCACTC +
Preference number: 5 (lower is better)
Translates to: ARAQPLGLSSLQHNC*TIQAERVRPSGRAL
Trigger: GAGTGCCCTGCCTGAGGGCCTCACCCGCTCCGCCTGGATAGTCCAACAGTTGTGCTGCAGGGAACTGAGGCCCAGAGGCTGAGCCCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS-3UTR CAA 90 bp ACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCCCCCGCTTCCGGAAGTaGGCACTGTCATCGATCTCA +
Preference number: 5 (lower is better)
Translates to: TGRVAHSKGPQALVAPQSPRFRK*ALSSIS
Trigger: TGAGATCGATGACAGTGCCAACTTCCGGAAGCGGGG...GGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTGGGCCCCGGGTCGCCTaGGGATCCGGACCCGGTACA +
Preference number: 5 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRGPRVA*GSGPGT
Trigger: TGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCC...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp TCCAGGGCCCCGGGTCGCCTTGGGATCCGGACCCGGTACAGGCCATTCAGGGCTACCAGCAAACCCTTCTaGGGATGGCTGAGGACACAG +
Preference number: 5 (lower is better)
Translates to: SRAPGRLGIRTRYRPFRATSKPF*GWLRTQ
Trigger: CTGTGTCCTCAGCCATCCCAAGAAGGGTTTGCTGGT...AGCCCTGAATGGCCTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCGTCCCGCTGGCTCTaGCTCATTGTCTTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: GAGDTGCCAKGPSPAAPLPSRWL*LIVFPF
Trigger: GAAGGGAAAGACAATGAGCAAGAGCCAGCGGGACGG...CAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS TCA 90 bp TCAGTTCCCTGCAGCACAACTGTTGGACTATCCAGGCGGAGCGGGTaGGGCCCTCAGGCAGGGCACTCAGCACAGCAGGGCTCAGCCATC +
Preference number: 5 (lower is better)
Translates to: SVPCSTTVGLSRRSG*GPQAGHSAQQGSAI
Trigger: GATGGCTGAGCCCTGCTGTGCTGAGTGCCCTGCCTGAGGGCCTCACCCGCTCCGCCTGGATAGTCCAACAGTTGTGCTGCAGGGAACTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS CCA 90 bp GCCTGGGCTCCTGTGCCACAACCTAACACCAGTCTCCACACTCAATaGACCAGAGGCCTGGGTGGAAGCCACCTCCTCCGGCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: AWAPVPQPNTSLHTQ*TRGLGGSHLLRLSP
Trigger: TGGGGACAGCCGGAGGAGGTGGCTTCCACCCAGGCCTCTGGTCCATTGAGTGTGGAGACTGGTGTTAGGTTGTGGCACAGGAGCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS CCA 90 bp CTCAGCATCCTCCTAGCCTGCCTCGGGCCACACAGACCTCTTCGCTaGCCTTGGCCTGCCTGGGCTCCTGTGCCACAACCTAACACCAGT +
Preference number: 5 (lower is better)
Translates to: LSILLACLGPHRPLR*PWPAWAPVPQPNTS
Trigger: ACTGGTGTTAGGTTGTGGCACAGGAGCCCAGGCAGGCCAAGGCCAGCGAAGAGGTCTGTGTGGCCCGAGGCAGGCTAGGAGGATGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS-3UTR CAA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTACCCCGCTTCCGGAAGTaGGCACTGTCATCGATCTCA +
Preference number: 5 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVPRFRK*ALSSIS
Trigger: TGAGATCGATGACAGTGCCAACTTCCGGAAGCGGGG...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp ACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTGGAGCTGCACCGAGGTGTaGAACAGCTCCAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: TQQRPAGPRSTAVQVGCWSCTEV*NSSRST
Trigger: CGTGGACCTGGAGCTGTTCAACACCTCGGTGCAGCT...CCAGCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp CAGCCCCCGGGGTGCGTCACCACCGACACGCCCACCACGTTGCCGGCCACATCCAAACAACAGTTGCTTTaGGCTGCTGGAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: QPPGCVTTDTPTTLPATSKQQLL*AAGSCS
Trigger: GCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTTT...GGATGTGGCCGGCAACGTGGTGGGCGTGTCGGTGGTGACGCACCCCGGGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp CGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCCTATGGGTGGGTGGATaGGCTCCCATGGAAATGCAA +
Preference number: 5 (lower is better)
Translates to: RAQETPAAVPKAPVQLLLLWVGG*APMEMQ
Trigger: TTGCATTTCCATGGGAGCCAATCCACCCACCCATAG...GAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp GGCTGCACTAGGCGTCGGGCCCAGAAGCCCCCGGCCATCCAGCCCCGACTCTTTTTTTCTGTCTTGTCATaGGCTCTCCCGCCCTCCTAC +
Preference number: 5 (lower is better)
Translates to: GCTRRRAQKPPAIQPRLFFSVLS*ALPPSY
Trigger: GTAGGAGGGCGGGAGAGCCAATGACAAGACAGAAAA...AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGACGCCTAGTGCAGCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS GCA 90 bp AGAGCTGGCCCGACCTCCCCTGACCACACTTCCATACCCTCTTCCTaGAAACAAGCCTCAGCCCAGGTACCAGGACACACAGGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: RAGPTSPDHTSIPSS*KQASAQVPGHTGGP
Trigger: CGGGCCTCCTGTGTGTCCTGGTACCTGGGCTGAGGCTTGTTTGCAGGAAGAGGGTATGGAAGTGTGGTCAGGGGAGGTCGGGCCAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS-3UTR CAA 90 bp CTTCCAGGCCATCCAGGGCCCCGGGTCGCCTTGGGATCCGGACCCGGTACAGGCTACAGTGTCTGGGCTTaGACTCCACTAACTGTTGGT +
Preference number: 5 (lower is better)
Translates to: LPGHPGPRVALGSGPGTGYSVWA*TPLTVG
Trigger: ACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTA...GCCTGTACCGGGTCCGGATCCCAAGGCGACCCGGGGCCCTGGATGGCCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp ACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTAGGCCCCGCTTCCGGAAGTaGGCACTGTCATCGATCTCA +
Preference number: 5 (lower is better)
Translates to: TEAGEKAACSQTAWARGRPRFRK*ALSSIS
Trigger: TGAGATCGATGACAGTGCCAACTTCCGGAAGCGGGG...CCTACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGGACACGCCCACCACGTaGCCGGCCACATCCACGTGC +
Preference number: 5 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLDTPTT*PATSTC
Trigger: GCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGTC...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GGGAGGCCCCTGGGTGTGCAAGACGGGACGCTGACCAGCCTGGGCCCTCACCGGGAATTTCAATCAAGCTaGTACATCAGGACCGTCTTG +
Preference number: 5 (lower is better)
Translates to: GRPLGVQDGTLTSLGPHREFQSS*YIRTVL
Trigger: CAAGACGGTCCTGATGTACAAGCTTGATTGAAATTC...CCGGTGAGGGCCCAGGCTGGTCAGCGTCCCGTCTTGCACACCCAGGGGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGATCTCGGGCTCTACTCGAGGGAACCCGACCTaGCCTGAAGGACCAACAGCG +
Preference number: 5 (lower is better)
Translates to: VGGCEVRTGIVARISGSTRGNPT*PEGPTA
Trigger: CGCTGTTGGTCCTTCAGGCAAGGTCGGGTTCCCTCG...AGTAGAGCCCGAGATCCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp GCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCGGACCAGCAAACCCTTCTaGGGATGGCTGAGGACACAG +
Preference number: 5 (lower is better)
Translates to: APGRQMSNHDPRGCTRRRTSKPF*GWLRTQ
Trigger: CTGTGTCCTCAGCCATCCCAAGAAGGGTTTGCTGGT...CCGACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp CTCTCCTACCCTCCTTCCCTCCCTCTTTCTCTCTCCCCCTCCGCACCGCTCCATACACAGAAGGATGGGTaGGGACTCTATCCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: LSYPPSLPLSLSPSAPLHTQKDG*GLYPGG
Trigger: TCCCCCAGGATAGAGTCCCAACCCATCCTTCTGTGT...ATGGAGCGGTGCGGAGGGGGAGAGAGAAAGAGGGAGGGAAGGAGGGTAGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp CTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTGGCCAGGCCTGGAGCATTTACCTaGCCAGGTGCTCTCACATCT +
Preference number: 5 (lower is better)
Translates to: LHGLGVGGCEVRTGIVARPGAFT*PGALTS
Trigger: AGATGTGAGAGCACCTGGCAAGGTAAATGCTCCAGG...CCTGGCCACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp GCACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTATCTGCCTTTTCTGTCTaGTCATTGGCTCTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: AQRLERRRHVPRLHGLGVSAFSV*SLALPP
Trigger: GGGCGGGAGAGCCAATGACAAGACAGAAAAGGCAGA...TACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp CCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCGGGCCGCTGGCTCTTGCTCATaGTCTTTCCCTTCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: PGRQMSNHDPRGCTRRRAAGSCS*SFPSLL
Trigger: AAGCAGGGAAGGGAAAGACAATGAGCAAGAGCCAGC...GGCCCGACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp TCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATAGTACCAGCAAACCCTTCTaGGGATGGCTGAGGACACAG +
Preference number: 5 (lower is better)
Translates to: SQTAWARGRGMRGQNWHSTSKPF*GWLRTQ
Trigger: CTGTGTCCTCAGCCATCCCAAGAAGGGTTTGCTGGT...ACTATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAGGATGCTACAGTGTCTGGGCTTaGACTCCACTAACTGTTGGT +
Preference number: 5 (lower is better)
Translates to: GTQQRPAGPRSTAVQVGCYSVWA*TPLTVG
Trigger: ACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTA...GCATCCTACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCGTAGCACCGCAGTCCAGGTAAAACAACAGTTGCTTTaGGCTGCTGGAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: EGGTQQRPAGPRSTAVQVKQQLL*AAGSCS
Trigger: GCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTTT...TACCTGGACTGCGGTGCTACGAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp CGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTGCCTACATCAGGACCGTCTaGCCAAAACAACAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: RRRHRLLCQRPQSSCSSAYIRTV*PKQQLL
Trigger: AAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTA...GGCAGAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp TCGTCGATGTTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGGACACGCCCACCACGTaGCCGGCCACATCCACGTGC +
Preference number: 5 (lower is better)
Translates to: SSMFLNRLTGRVAHSKGPDTPTT*PATSTC
Trigger: GCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGTC...CGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAACATCGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp CCCTGGCCCCCGGTGTCTGGCGCTCCTGACATCATGAGGAACAGGACGACGGGAATGTACATCCAGTATTaGGCGAAGAAGGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: PWPPVSGAPDIMRNRTTGMYIQY*AKKDFC
Trigger: GCAGAAGTCCTTCTTCGCCAAATACTGGATGTACAT...TCCCGTCGTCCTGTTCCTCATGATGTCAGGAGCGCCAGACACCGGGGGCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599293.1
CDS-3UTR CAA 90 bp TTCCGGAAGTTGGCACTGTCATCGATCTCAAATGAGTGCTCCAGCAGCAGCCCCCCCCGCTTCCGGAAGTaGGCACTGTCATCGATCTCA +
Preference number: 5 (lower is better)
Translates to: FRKLALSSISNECSSSSPPRFRK*ALSSIS
Trigger: TGAGATCGATGACAGTGCCAACTTCCGGAAGCGGGG...GGGGCTGCTGCTGGAGCACTCATTTGAGATCGATGACAGTGCCAACTTCCGGAA
57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCCCCGCTTCCGGAAGTaGGCACTGTCATCGATCTCA +
Preference number: 5 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLPRFRK*ALSSIS
Trigger: TGAGATCGATGACAGTGCCAACTTCCGGAAGCGGGG...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp CAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGGACACGCCCACCACGTaGCCGGCCACATCCACGTGC +
Preference number: 5 (lower is better)
Translates to: QACTSGPSCQNNSCFWLLDTPTT*PATSTC
Trigger: GCACGTGGATGTGGCCGGCAACGTGGTGGGCGTGTC...CAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp TTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCAGGCCCTCAGCTGCACCGAGGTGTaGAACAGCTCCAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: FLNRLTGRVAHSKGPQALSCTEV*NSSRST
Trigger: CGTGGACCTGGAGCTGTTCAACACCTCGGTGCAGCT...GAGGGCCTGCGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp CCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCGGGCCATGTACATCCAGTATTaGGCGAAGAAGGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: PGRQMSNHDPRGCTRRRAMYIQY*AKKDFC
Trigger: GCAGAAGTCCTTCTTCGCCAAATACTGGATGTACAT...GGCCCGACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334976.11
ENST00000598585.1
ENST00000599293.1
CDS-3UTR CAA 90 bp TGTTCCATCTCCAGGCGCTCAATGAAGGCCGCCGTCTCAGGGCCTGGGGCTGTGTACATCAGGACCGTCTaGCCAAAACAACAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: CSISRRSMKAAVSGPGAVYIRTV*PKQQLL
Trigger: AAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTA...CACAGCCCCAGGCCCTGAGACGGCGGCCTTCATTGAGCGCCTGGAGATGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GGGTGGTGGAGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTGGCAGAGGACGAGGCTaGAGCTGGGACCAAGGCCAT +
Preference number: 5 (lower is better)
Translates to: GWWRGFYLQCLGFDSTNCGRGRG*SWDQGH
Trigger: ATGGCCTTGGTCCCAGCTCAAGCCTCGTCCTCTGCC...ACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCTCCACCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp GTTCCCAGACTGCATGGGCTCGGGGTAGGGGGATGCGAGGTCAGAACTGGCATACAACATTGTTGTGCCTaGCTGACTGGAAGGTGGGTA +
Preference number: 5 (lower is better)
Translates to: VPRLHGLGVGGCEVRTGIQHCCA*LTGRWV
Trigger: TACCCACCTTCCAGTCAGCAAGGCACAACAATGTTG...TATGCCAGTTCTGACCTCGCATCCCCCTACCCCGAGCCCATGCAGTCTGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGGACACTTCCCTCCATaGAGAGAAGCCACAGGCGCC +
Preference number: 5 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGGHFPP*REATGA
Trigger: GGCGCCTGTGGCTTCTCTCAATGGAGGGAAGTGTCC...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp CGGGCGCAGGAGACACCGGCTGCTGTGCCAAAGGCCCCAGTCCAGCTGCTCCTCTCAGAAATGAGAAAATaGGTGCCCAATGTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: RAQETPAAVPKAPVQLLLSEMRK*VPNVSE
Trigger: TTCAGAAACATTGGGCACCAATTTTCTCATTTCTGA...GAGGAGCAGCTGGACTGGGGCCTTTGGCACAGCAGCCGGTGTCTCCTGCGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp AGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGAGCTGCACCGAGGTGTaGAACAGCTCCAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: RQGFLVCTRQTNVKPRPQSCTEV*NSSRST
Trigger: CGTGGACCTGGAGCTGTTCAACACCTCGGTGCAGCT...CTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCGGATGTACATCCAGTATTaGGCGAAGAAGGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: APGRQMSNHDPRGCTRRRMYIQY*AKKDFC
Trigger: GCAGAAGTCCTTCTTCGCCAAATACTGGATGTACAT...CCGACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334976.11
ENST00000598585.1
ENST00000599293.1
CDS-3UTR CAA 90 bp GAGGACACAGGGGACTCCAGCAGAAAGGGAGGCCCCTGGGTGTGCAAGACGGGAGAATTTCAATCAAGCTaGTACATCAGGACCGTCTTG +
Preference number: 5 (lower is better)
Translates to: EDTGDSSRKGGPWVCKTGEFQSS*YIRTVL
Trigger: CAAGACGGTCCTGATGTACAAGCTTGATTGAAATTC...TCCCGTCTTGCACACCCAGGGGCCTCCCTTTCTGCTGGAGTCCCCTGTGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp TCGTCGATGTTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGAGCTGCACCGAGGTGTaGAACAGCTCCAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: SSMFLNRLTGRVAHSKGPSCTEV*NSSRST
Trigger: CGTGGACCTGGAGCTGTTCAACACCTCGGTGCAGCT...CGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAACATCGACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp CTCTCCTACCCTCCTTCCCTCCCTCTTTCTCTCTCCCCCTCCGCACCGCTCCATACACTTGCAAAACTGTaGACATGTGCATCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LSYPPSLPLSLSPSAPLHTLAKL*TCASAC
Trigger: ACAAGCAGATGCACATGTCAACAGTTTTGCAAGTGT...ATGGAGCGGTGCGGAGGGGGAGAGAGAAAGAGGGAGGGAAGGAGGGTAGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp GCACAGAGGCTGGAGAGAAGGCGGCATGTTCCCAGACTGCATGGGCTCGGGGTATTTGTAACAACATTGTaGTGCCTTGCTGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: AQRLERRRHVPRLHGLGVFVTTL*CLADWK
Trigger: CTTCCAGTCAGCAAGGCACAACAATGTTGTTACAAA...TACCCCGAGCCCATGCAGTCTGGGAACATGCCGCCTTCTCTCCAGCCTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp CAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGGGTGGCTGCGCCCTGTaGAGGCAGGGAACGTTTCTG +
Preference number: 5 (lower is better)
Translates to: QACTSGPSCQNNSCFWLLGGCAL*RQGTFL
Trigger: CAGAAACGTTCCCTGCCTCAACAGGGCGCAGCCACC...CAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp GCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTCGGTATCCAGGTTCCTACTaGTTTTCAGTTATGGGGTTG +
Preference number: 5 (lower is better)
Translates to: APGRQMSNHDPRGCTRRRYPGSY*FSVMGL
Trigger: CAACCCCATAACTGAAAACAAGTAGGAACCTGGATA...CCGACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp GGAAGTTGGCACTGTCATCGATCTCAAATGAGTGCTCCAGCAGCAGCCCCACCGTACAGTGTCTGGGCTTaGACTCCACTAACTGTTGGT +
Preference number: 5 (lower is better)
Translates to: GSWHCHRSQMSAPAAAPPYSVWA*TPLTVG
Trigger: ACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTA...CGGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGATGACAGTGCCAACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GGAAGTTGGCACTGTCATCGATCTCAAATGAGTGCTCCAGCAGCAGCCCCACCGAAACAACAGTTGCTTTaGGCTGCTGGAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: GSWHCHRSQMSAPAAAPPKQQLL*AAGSCS
Trigger: GCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTTT...CGGTGGGGCTGCTGCTGGAGCACTCATTTGAGATCGATGACAGTGCCAACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp TGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACAGCCCAGGCTGCACCTaGGCACAGTGGAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: CHLKGKDSLFAPGRQMSNSPGCT*AQWRVH
Trigger: GTGGACCCTCCACTGTGCCAAGGTGCAGCCTGGGCT...GTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp TTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGCACTAGGCGTATGATGTGCCAGTATTaGGCGAAGAAGGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: FAPGRQMSNHDPRGCTRRMMCQY*AKKDFC
Trigger: GCAGAAGTCCTTCTTCGCCAAATACTGGCACATCAT...ACGCCTAGTGCAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376918.7
ENST00000601780.5
CDS-3UTR CAA 90 bp GGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGCTGTACAGTGTCTGGGCTTaGACTCCACTAACTGTTGGT +
Preference number: 5 (lower is better)
Translates to: GFLVCTRQTNVKPRPQGLYSVWA*TPLTVG
Trigger: ACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTA...CAGCCCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp TCGTCGATGTTTTTAAATAGACTTACAGGGAGGGTGGCACACAGCAAAGGCCCGCACCACCTCCTGGTCTaGACAGTCGACTCACAAACC +
Preference number: 5 (lower is better)
Translates to: SSMFLNRLTGRVAHSKGPHHLLV*TVDSQT
Trigger: GGTTTGTGAGTCGACTGTCAAGACCAGGAGGTGGTG...CGGGCCTTTGCTGTGTGCCACCCTCCCTGTAAGTCTATTTAAAAACATCGACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp TGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACTACATCAGGACCGTCTaGCCAAAACAACAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: CGGPVTLKARIPCLHQADYIRTV*PKQQLL
Trigger: AAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTA...GTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp AAGTCTGGAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTTACAGTGTCTGGGCTTaGACTCCACTAACTGTTGGT +
Preference number: 5 (lower is better)
Translates to: KSGSLWRACHLKGKDSLFYSVWA*TPLTVG
Trigger: ACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTA...AAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTCCAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACCACGACCCCAGGGGAATTTCAATCAAGCTaGTACATCAGGACCGTCTTG +
Preference number: 5 (lower is better)
Translates to: ARIPCLHQADKCQTTTPGEFQSS*YIRTVL
Trigger: CAAGACGGTCCTGATGTACAAGCTTGATTGAAATTC...CCCTGGGGTCGTGGTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp GAAGCCTGTGGAGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGCTCACAAACCATCACTaGTTTATAAACGCGTTTCCG +
Preference number: 5 (lower is better)
Translates to: EACGGPVTLKARIPCLHQLTNHH*FINAFP
Trigger: CGGAAACGCGTTTATAAACAAGTGATGGTTTGTGAG...CTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCTCCACAGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp GGGTGGTGGAGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTGACATGTGCATCTGCTaGTTTCTGTGGAGAGTATCT +
Preference number: 5 (lower is better)
Translates to: GWWRGFYLQCLGFDSTNCDMCIC*FLWRVS
Trigger: AGATACTCTCCACAGAAACAAGCAGATGCACATGTC...ACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCTCCACCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp AGGGCCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGATGATGTGCCAGTATTaGGCGAAGAAGGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: RACHLKGKDSLFAPGRQMMMCQY*AKKDFC
Trigger: GCAGAAGTCCTTCTTCGCCAAATACTGGCACATCAT...CATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376918.7
ENST00000601780.5
CDS-3UTR CAA 90 bp TGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAAACAAACAACAGTTGCTTTaGGCTGCTGGAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: CHLKGKDSLFAPGRQMSNKQQLL*AAGSCS
Trigger: GCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTTT...GTTTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp CCTGTCACCTTAAAGGCAAGGATTCCTTGTTTGCACCAGGCAGACAAATGTCAATACATCAGGACCGTCTaGCCAAAACAACAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: PVTLKARIPCLHQADKCQYIRTV*PKQQLL
Trigger: AAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTA...TTGACATTTGTCTGCCTGGTGCAAACAAGGAATCCTTGCCTTTAAGGTGACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp CAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTGGCTGCTGTTCTTTCTCTCCATATaGCTCTTCCACACTCATGCA +
Preference number: 5 (lower is better)
Translates to: QACTSGPSCQNNSCFWLLFFLSI*LFHTHA
Trigger: TGCATGAGTGTGGAAGAGCAATATGGAGAGAAAGAA...CAGCAGCCAAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp TGGAAATGCAACTGGGACTGCACATGGGAAACAAAGGAAAATGGAATTTGGTTCAAACAACAGTTGCTTTaGGCTGCTGGAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: WKCNWDCTWETKENGIWFKQQLL*AAGSCS
Trigger: GCTACAGCTTCCAGCAGCCAAAAGCAACTGTTGTTT...GAACCAAATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp CACTTGTTTATAAACGCGTTTCCGATCTGCCATCGTAATTCCATTTTAGTCATGCCCCTGCTCTGCGTGTaGGATGTGAAAAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: HLFINAFPICHRNSILVMPLLCV*DVKRMS
Trigger: TGACATCCTTTTCACATCCAACACGCAGAGCAGGGG...CATGACTAAAATGGAATTACGATGGCAGATCGGAAACGCGTTTATAAACAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp AGGGGGTTCTATTTACAGTGTCTGGGCTTTGACTCCACTAACTGTTGGTTTTGTGAATTTCAATCAAGCTaGTACATCAGGACCGTCTTG +
Preference number: 5 (lower is better)
Translates to: RGFYLQCLGFDSTNCWFCEFQSS*YIRTVL
Trigger: CAAGACGGTCCTGATGTACAAGCTTGATTGAAATTC...ACAAAACCAACAGTTAGTGGAGTCAAAGCCCAGACACTGTAAATAGAACCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000599293.1
ENST00000601780.5
CDS-3UTR CAA 90 bp ATTTCAATCAAGCTTGTACATCAGGACCGTCTTGCCAAAACAACAGTTGCTTTTTCCTTTGTAACAACATaGTTGTGCCTTGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: ISIKLVHQDRLAKTTVAFSFVTT*LCLADW
Trigger: CCAGTCAGCAAGGCACAACAATGTTGTTACAAAGGA...AAAAGCAACTGTTGTTTTGGCAAGACGGTCCTGATGTACAAGCTTGATTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS-3UTR CAA 90 bp TGGAAATGCAACTGGGACTGCACATGGGAAACAAAGGAAAATGGAATTTGGTTCAACCTACTCTATCTTTaGAGTTTCATACTTCATCCC +
Preference number: 5 (lower is better)
Translates to: WKCNWDCTWETKENGIWFNLLYL*SFILHP
Trigger: GGGATGAAGTATGAAACTCAAAAGATAGAGTAGGTT...GAACCAAATTCCATTTTCCTTTGTTTCCCATGTGCAGTCCCAGTTGCATTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334976.11
CDS TCA 72 bp AGCCGCGGAGCACGCCGGGAGGAACAGGCCGCATCCTaGCGCCCGTGCGCCTGCGCTGGGCCCCGGCACCTG +
Preference number: 6 (lower is better)
Translates to: SRGARREEQAAS*RPCACAGPRHL
Trigger: CAGGTGCCGGGGCCCAGCGCAGGCGCACGGGCGTCAGGATGCGGCCTGTTCCTCCCGGCGTGCTCCGCGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS CCA 72 bp GGAACAGGCCGCATCCTGACGCCCGTGCGCCTGCGCTaGGCCCCGGCACCTGCGCACTGGCACCCGTCCGCA +
Preference number: 6 (lower is better)
Translates to: GTGRILTPVRLR*APAPAHWHPSA
Trigger: TGCGGACGGGTGCCAGTGCGCAGGTGCCGGGGCCCAGCGCAGGCGCACGGGCGTCAGGATGCGGCCTGTTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS GCA 72 bp GGCCCGGCAGCCGCTGCCCCGGGCTCGACTGGGCGCTaGTACCGCCATCAGCAAGAGCAGGAGCAGCCGGGT +
Preference number: 6 (lower is better)
Translates to: GPAAAAPGSTGR*YRHQQEQEQPG
Trigger: ACCCGGCTGCTCCTGCTCTTGCTGATGGCGGTAGCAGCGCCCAGTCGAGCCCGGGGCAGCGGCTGCCGGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS CCA 72 bp CAGTCCCGGCCCGGCAGCCGCTGCCCCGGGCTCGACTaGGCGCTGCTACCGCCATCAGCAAGAGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: QSRPGSRCPGLD*ALLPPSARAGA
Trigger: TGCTCCTGCTCTTGCTGATGGCGGTAGCAGCGCCCAGTCGAGCCCGGGGCAGCGGCTGCCGGGCCGGGACTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334976.11
ENST00000376918.7
ENST00000598585.1
ENST00000599293.1
ENST00000601780.5
CDS TCA 72 bp CATCTCGGCTTCTTCCCACCAGCGAAGGGACGGCTGTaGGCCAAGAGCCGCGGAGCACGCCGGGAGGAACAG +
Preference number: 6 (lower is better)
Translates to: HLGFFPPAKGRL*AKSRGARREEQ
Trigger: CTGTTCCTCCCGGCGTGCTCCGCGGCTCTTGGCTCACAGCCGTCCCTTCGCTGGTGGGAAGAAGCCGAGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601780.5
CDS CCA 72 bp CTCCTAGCCTGCCTCGGGCCACACAGACCTCTTCGCTaGCCTTGGCCTGCCTGGGCTCCTGTGCCACAACCT +
Preference number: 6 (lower is better)
Translates to: LLACLGPHRPLR*PWPAWAPVPQP
Trigger: AGGTTGTGGCACAGGAGCCCAGGCAGGCCAAGGCCAGCGAAGAGGTCTGTGTGGCCCGAGGCAGGCTAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS CAA 90 bp GGCAAGGGCTCAGCCTCTGGGCCTCAGTTCCCTGCAGCACAACTGTaGGACTATCCAGGCGGAGCGGGTGAGGCCCTCAGGCAGGGCACT +
Preference number: 6 (lower is better)
Translates to: GKGSASGPQFPAAQL*DYPGGAGEALRQGT
Trigger: AGTGCCCTGCCTGAGGGCCTCACCCGCTCCGCCTGGATAGTCCAACAGTTGTGCTGCAGGGAACTGAGGCCCAGAGGCTGAGCCCTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS TCA 72 bp TGCAGCACAACTGTTGGACTATCCAGGCGGAGCGGGTaGGGCCCTCAGGCAGGGCACTCAGCACAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: CSTTVGLSRRSG*GPQAGHSAQQG
Trigger: GCCCTGCTGTGCTGAGTGCCCTGCCTGAGGGCCTCACCCGCTCCGCCTGGATAGTCCAACAGTTGTGCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS GCA 72 bp CCCAAGACCTGCGACATCCGTAGACCGCGCCCGCTATaGACAGCTAAAGAGCACTCACCCCTCGCGCACCAG +
Preference number: 6 (lower is better)
Translates to: PKTCDIRRPRPL*TAKEHSPLAHQ
Trigger: CTGGTGCGCGAGGGGTGAGTGCTCTTTAGCTGTGCATAGCGGGCGCGGTCTACGGATGTCGCAGGTCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599293.1
ENST00000601780.5
CDS CAA 72 bp TCAGCCTCTGGGCCTCAGTTCCCTGCAGCACAACTGTaGGACTATCCAGGCGGAGCGGGTGAGGCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: SASGPQFPAAQL*DYPGGAGEALR
Trigger: CCTGAGGGCCTCACCCGCTCCGCCTGGATAGTCCAACAGTTGTGCTGCAGGGAACTGAGGCCCAGAGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS TCA 72 bp CCGGACCCACTCCTCTCTCCTTCCTGTACAACCCCCTaGAGAACCTGCTCGCCCCTCCTTTCCAAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: PDPLLSPSCTTP*RTCSPLLSKPP
Trigger: GGGAGGCTTGGAAAGGAGGGGCGAGCAGGTTCTTCAGGGGGTTGTACAGGAAGGAGAGAGGAGTGGGTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS CCA 72 bp CCTGTGCCACAACCTAACACCAGTCTCCACACTCAATaGACCAGAGGCCTGGGTGGAAGCCACCTCCTCCGG +
Preference number: 6 (lower is better)
Translates to: PVPQPNTSLHTQ*TRGLGGSHLLR
Trigger: CCGGAGGAGGTGGCTTCCACCCAGGCCTCTGGTCCATTGAGTGTGGAGACTGGTGTTAGGTTGTGGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS GCA 72 bp CCGACCTCCCCTGACCACACTTCCATACCCTCTTCCTaGAAACAAGCCTCAGCCCAGGTACCAGGACACACA +
Preference number: 6 (lower is better)
Translates to: PTSPDHTSIPSS*KQASAQVPGHT
Trigger: TGTGTGTCCTGGTACCTGGGCTGAGGCTTGTTTGCAGGAAGAGGGTATGGAAGTGTGGTCAGGGGAGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594508.1
CDS GCA 72 bp TTCCGGAAGTTGGCACTGTCATCGATCTCAAATGAGTaGGCCATCAGCAAGAGCAGGAGCAGCCGGGTTGCC +
Preference number: 6 (lower is better)
Translates to: FRKLALSSISNE*AISKSRSSRVA
Trigger: GGCAACCCGGCTGCTCCTGCTCTTGCTGATGGCGCACTCATTTGAGATCGATGACAGTGCCAACTTCCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597426.1
CDS CAA 72 bp TGCTGGTTCCAGAGCAGTGAGCCCCGCTTCCGGAAGTaGGCACTGTCATCGATCTCAAATGAGTGCGCCATC +
Preference number: 6 (lower is better)
Translates to: CWFQSSEPRFRK*ALSSISNECAI
Trigger: GATGGCGCACTCATTTGAGATCGATGACAGTGCCAACTTCCGGAAGCGGGGCTCACTGCTCTGGAACCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597426.1