RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EMC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000127463

Ensembl transcript IDs: ENST00000375199.7, ENST00000375208.7, ENST00000461353.1, ENST00000462505.1, ENST00000467423.2, ENST00000475079.1, ENST00000477853.6, ENST00000480380.1, ENST00000486238.1, ENST00000486405.1, ENST00000488681.1, ENST00000494770.6, ENST00000641089.1

Found 646 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATCACATCCTGTCCGTGCAGCAGCATGGCATCCACAGCCCCTTCTaGCGTGCCCTTGTCAACATGGCGCCACAAAATATTCAAAGATGG +
Preference number: 1 (lower is better)
Translates to: DHILSVQQHGIHSPF*RALVNMAPQNIQRW
Trigger: CCATCTTTGAATATTTTGTGGCGCCATGTTGACAAGGGCACGGCAGAAGGGGCTGTGGATGCCATGCTGCTGCACGGACAGGATGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475079.1
3UTR TCA 90 bp ATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTaGGAGTGTCAGCTGAGAGAGTTCTGTCTCTCTCCATGTAGGATC +
Preference number: 1 (lower is better)
Translates to: MQTPLDFKRKPIRNL*ECQLREFCLSPCRI
Trigger: GATCCTACATGGAGAGAGACAGAACTCTCTCAGCTGACACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR TCA 90 bp TCACATATAGATCCCTCAACCCTAAGTTACTTTGGAGGGAAGCCATaGGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCT +
Preference number: 1 (lower is better)
Translates to: SHIDPSTLSYFGGKP*EAGSVLKPQLRMDP
Trigger: AGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAACTTAGGGTTGAGGGATCTATATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR CCA 90 bp AGATCCCTCAACCCTAAGTTACTTTGGAGGGAAGCCATGAGAGGCTaGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTC +
Preference number: 1 (lower is better)
Translates to: RSLNPKLLWREAMRG*ISPQASAKDGSYFF
Trigger: GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAACTTAGGGTTGAGGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR CCA 90 bp GTAAGTTTTGACATCACATATAGATCCCTCAACCCTAAGTTACTTTaGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCT +
Preference number: 1 (lower is better)
Translates to: VSFDITYRSLNPKLL*REAMRGWISPQASA
Trigger: AGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAACTTAGGGTTGAGGGATCTATATGTGATGTCAAAACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR CCA 90 bp GATCCTATTTCTTCCCAGTGCAAAACACCAAATGTACCTATAAGGTaGAGTCGGCAAGGAGAGTTCCCCTCTTACTTTGAAGCAAGAGAT +
Preference number: 1 (lower is better)
Translates to: DPISSQCKTPNVPIR*SRQGEFPSYFEARD
Trigger: ATCTCTTGCTTCAAAGTAAGAGGGGAACTCTCCTTGCCGACTCCACCTTATAGGTACATTTGGTGTTTTGCACTGGGAAGAAATAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp AGGCCCCCGATGTTAGTCTCCCAGGAACGCATGATTCGGCCTCCATTGGACACAGTCCGTGCAGCAGCATaGCATCCACAGCCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: RPPMLVSQERMIRPPLDTVRAAA*HPQPLL
Trigger: CAGAAGGGGCTGTGGATGCCATGCTGCTGCACGGAC...TGTGTCCAATGGAGGCCGAATCATGCGTTCCTGGGAGACTAACATCGGGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475079.1
3UTR-3UTR TCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACTTTGGAGGGAAGCCATaGGAGGCTGGATCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHFGGKP*EAGSVL
Trigger: GAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAA...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp CAGGCCCCCGATGTTAGTCTCCCAGGAACGCATGATTCGGCCTCCATTGGACACGTGCCCTTGTCAACATaGCGCCACAAAATATTCAAA +
Preference number: 2 (lower is better)
Translates to: QAPDVSLPGTHDSASIGHVPLST*RHKIFK
Trigger: TTTGAATATTTTGTGGCGCCATGTTGACAAGGGCAC...GTGTCCAATGGAGGCCGAATCATGCGTTCCTGGGAGACTAACATCGGGGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475079.1
3UTR-3UTR TCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACAAAAGGAGTTCTGCGTaGAGGTCATCCATCTTCCCT +
Preference number: 2 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHKRSSA*RSSIFP
Trigger: AGGGAAGATGGATGACCTTCACGCAGAACTCCTTTT...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTCCCATCAGGAATCTCTaGGAGTGTCAGCTGAGAGAG +
Preference number: 2 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFPIRNL*ECQLRE
Trigger: CTCTCTCAGCTGACACTCTCAGAGATTCCTGATGGG...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACCAATGCAGACGCCTTTaGACTTCAAGAGAAAGCCCA +
Preference number: 2 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHQCRRL*TSRESP
Trigger: TGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATTG...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTGAAGCCATGAGAGGCTaGATCAGTCCTCAAGCCTCA +
Preference number: 2 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFEAMRG*ISPQAS
Trigger: TGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTC...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTAACTGCAGCTGTAGCTaGTTATCTGACCCACACTCC +
Preference number: 2 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFNCSCS*LSDPHS
Trigger: GGAGTGTGGGTCAGATAAGCAGCTACAGCTGCAGTT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACAATGTACCTATAAGGTaGAGTCGGCAAGGAGAGTTC +
Preference number: 2 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHNVPIR*SRQGEF
Trigger: GAACTCTCCTTGCCGACTCCACCTTATAGGTACATT...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTGTAGCAGAGACACAGTaGCCTAGCCAATCGGCAGTG +
Preference number: 2 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIVAETQ*PSQSAV
Trigger: CACTGCCGATTGGCTAGGCCACTGTGTCTCTGCTAC...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR TCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTCCCATCAGGAATCTCTaGGAGTGTCAGCTGAGAGAG +
Preference number: 2 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIPIRNL*ECQLRE
Trigger: CTCTCTCAGCTGACACTCTCAGAGATTCCTGATGGG...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTAACCCTAAGTTACTTTaGAGGGAAGCCATGAGAGGC +
Preference number: 2 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFNPKLL*REAMRG
Trigger: GCCTCTCATGGCTTCCCTCCAAAGTAACTTAGGGTT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp ATGATTCGGCCTCCATTGGACACAGTGATCACATCCTGTCCGTGCAGCAGCATGAGGAGAGGCATCTTTTaGCCAACATGTTCCTTATTC +
Preference number: 2 (lower is better)
Translates to: MIRPPLDTVITSCPCSSMRRGIF*PTCSLF
Trigger: GAATAAGGAACATGTTGGCCAAAAGATGCCTCTCCT...CATGCTGCTGCACGGACAGGATGTGATCACTGTGTCCAATGGAGGCCGAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475079.1
3UTR CAA 90 bp TCTTTTGGCCAACATGTTCCTTATTCAGGAATCAGCCAGGCAGAGTaGGCAATGGTAAGTCTTTCATCCCTGAGGCAGCCAGTAGACACA +
Preference number: 2 (lower is better)
Translates to: SFGQHVPYSGISQAE*AMVSLSSLRQPVDT
Trigger: TGTGTCTACTGGCTGCCTCAGGGATGAAAGACTTACCATTGCCAACTCTGCCTGGCTGATTCCTGAATAAGGAACATGTTGGCCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475079.1
3UTR-3UTR TCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCATCTGAGAGTGTCAGCTaGGAGAGTTCTGTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSSESVS*ESSVSL
Trigger: GAGAGAGACAGAACTCTCTCAGCTGACACTCTCAGA...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTACCAATCCACCAAACTaGAGCTGTAGCTGCTTATCT +
Preference number: 2 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFTNPPN*SCSCLS
Trigger: AGATAAGCAGCTACAGCTGCAGTTTGGTGGATTGGT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTAATGTACCTATAAGGTaGAGTCGGCAAGGAGAGTTC +
Preference number: 2 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFNVPIR*SRQGEF
Trigger: GAACTCTCCTTGCCGACTCCACCTTATAGGTACATT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR CAA 90 bp GTCATCCTTCAGAACGTCAAACTGCTTGGATGGGTAGACTCGAGTTaGGTAAATGTCCAAACCATAGGCCACAACCAAACAAGTGGACTC +
Preference number: 2 (lower is better)
Translates to: VILQNVKLLGWVDSS*VNVQTIGHNQTSGL
Trigger: GAGTCCACTTGTTTGGTTGTGGCCTATGGTTTGGACATTTACCAAACTCGAGTCTACCCATCCAAGCAGTTTGACGTTCTGAAGGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486238.1
3UTR-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCCTACAGTTCTTAGCTaGGCACTGACACACACACAT +
Preference number: 2 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLPTVLS*ALTHTH
Trigger: ATGTGTGTGTGTCAGTGCTCAGCTAAGAACTGTAGG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAACCCATCAGGAATCTCTaGGAGTGTCAGCTGAGAGAG +
Preference number: 2 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQPIRNL*ECQLRE
Trigger: CTCTCTCAGCTGACACTCTCAGAGATTCCTGATGGG...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGACCAATCCACCAAACTaGAGCTGTAGCTGCTTATCT +
Preference number: 2 (lower is better)
Translates to: NADAFGLQEKAHQESLRVTNPPN*SCSCLS
Trigger: AGATAAGCAGCTACAGCTGCAGTTTGGTGGATTGGT...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGTCCCAAAAGGAGTTCTaGGTGAAGGTCATCCATCTT +
Preference number: 2 (lower is better)
Translates to: NADAFGLQEKAHQESLRVSQKEF*VKVIHL
Trigger: AAGATGGATGACCTTCACGCAGAACTCCTTTTGGGA...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCAATGCAGACGCCTTTaGACTTCAAGAGAAAGCCCA +
Preference number: 2 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLQCRRL*TSRESP
Trigger: TGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATTG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATCTGAGAGTGTCAGCTaGGAGAGTTCTGTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQSESVS*ESSVSL
Trigger: GAGAGAGACAGAACTCTCTCAGCTGACACTCTCAGA...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR TCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACCCTACAGTTCTTAGCTaGGCACTGACACACACACAT +
Preference number: 2 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNPTVLS*ALTHTH
Trigger: ATGTGTGTGTGTCAGTGCTCAGCTAAGAACTGTAGG...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR TCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACGCCCAGCCTAATAAATaGCAGCACGAAACTAGAGGT +
Preference number: 2 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNAQPNK*QHETRG
Trigger: ACCTCTAGTTTCGTGCTGTCATTTATTAGGCTGGGC...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR TCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTAGACCAGCCTGTGGGTaGAATGAGAGATTATCTCTT +
Preference number: 2 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFRPACG*NERLSL
Trigger: AAGAGATAATCTCTCATTTCACCCACAGGCTGGTCT...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTAACAAGACGCTAGTATaGACTTGGCTTCTGATAAAT +
Preference number: 2 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFNKTLV*TWLLIN
Trigger: ATTTATCAGAAGCCAAGTGCATACTAGCGTCTTGTT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATCCCAAAAGGAGTTCTaGGTGAAGGTCATCCATCTT +
Preference number: 2 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQSQKEF*VKVIHL
Trigger: AAGATGGATGACCTTCACGCAGAACTCCTTTTGGGA...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAGAAAAGTATAGGCAATaGGCAACAAACAAGACGCTA +
Preference number: 2 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSEKYRQ*ATNKTL
Trigger: TAGCGTCTTGTTTGTTGCCCATTGCCTATACTTTTC...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTGAAAAGTATAGGCAATaGGCAACAAACAAGACGCTA +
Preference number: 2 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIEKYRQ*ATNKTL
Trigger: TAGCGTCTTGTTTGTTGCCCATTGCCTATACTTTTC...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTATTATCTCTTCTCCCTaGAAATGTCTTCAAGGCTCA +
Preference number: 2 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIIISSP*KCLQGS
Trigger: TGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAAT...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR TCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAATCTGAGAGTGTCAGCTaGGAGAGTTCTGTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKSESVS*ESSVSL
Trigger: GAGAGAGACAGAACTCTCTCAGCTGACACTCTCAGA...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAAACTGCAGCTGTAGCTaGTTATCTGACCCACACTCC +
Preference number: 2 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKNCSCS*LSDPHS
Trigger: GGAGTGTGGGTCAGATAAGCAGCTACAGCTGCAGTT...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTAAAGAAAGGAAACAATaGAGACGCCTTTGGACTTCA +
Preference number: 2 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFKERKQ*RRLWTS
Trigger: TGAAGTCCAAAGGCGTCTGCATTGTTTCCTTTCTTT...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTAACAAGACGCTAGTATaGACTTGGCTTCTGATAAAT +
Preference number: 2 (lower is better)
Translates to: RVYLFHHRARDGLLCTYINKTLV*TWLLIN
Trigger: ATTTATCAGAAGCCAAGTGCATACTAGCGTCTTGTT...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR TCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAACCTACAGTTCTTAGCTaGGCACTGACACACACACAT +
Preference number: 2 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKPTVLS*ALTHTH
Trigger: ATGTGTGTGTGTCAGTGCTCAGCTAAGAACTGTAGG...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR TCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTTCTTTAACTAGGTTATaGTTAGACCAGCCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFSLTRL*LDQPVG
Trigger: ACCCACAGGCTGGTCTAATCATAACCTAGTTAAAGA...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGAACTGCAGCTGTAGCTaGTTATCTGACCCACACTCC +
Preference number: 2 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQNCSCS*LSDPHS
Trigger: GGAGTGTGGGTCAGATAAGCAGCTACAGCTGCAGTT...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTTTCCTCTTCCTTCTCTaGCATAATCTACCATCAGCA +
Preference number: 2 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFFLFLL*HNLPSA
Trigger: TGCTGATGGTAGATTATGGCAGAGAAGGAAGAGGAA...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAGAAACAAAGATTTGGTaGCCCAGCCTAATAAATGAC +
Preference number: 2 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQETKIW*PSLIND
Trigger: GTCATTTATTAGGCTGGGCCACCAAATCTTTGTTTC...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCATTGAAACAAAGATTTaGTGGCCCAGCCTAATAAAT +
Preference number: 2 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLIETKI*WPSLIN
Trigger: ATTTATTAGGCTGGGCCACCAAATCTTTGTTTCAAT...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR TCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTTTCTTAGCTGAGCACTaGCACACACACATACTCCAC +
Preference number: 2 (lower is better)
Translates to: DTKEDLNSVICHLLYANIFLAEH*HTHILH
Trigger: GTGGAGTATGTGTGTGTGTCAGTGCTCAGCTAAGAA...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAATCCCAAAAGGAGTTCTaGGTGAAGGTCATCCATCTT +
Preference number: 2 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKSQKEF*VKVIHL
Trigger: AAGATGGATGACCTTCACGCAGAACTCCTTTTGGGA...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTAACCCTAAGTTACTTTaGAGGGAAGCCATGAGAGGC +
Preference number: 2 (lower is better)
Translates to: DTKEDLNSVICHLLYANINPKLL*REAMRG
Trigger: GCCTCTCATGGCTTCCCTCCAAAGTAACTTAGGGTT...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR TCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAGTTCCCCTCTTACTTTaGAGCAAGAGATGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKVPLLL*SKRWKK
Trigger: CTTTTTCCATCTCTTGCTTCAAAGTAAGAGGGGAAC...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAAAAGAAAGGAAACAATaGAGACGCCTTTGGACTTCA +
Preference number: 2 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKKERKQ*RRLWTS
Trigger: TGAAGTCCAAAGGCGTCTGCATTGTTTCCTTTCTTT...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAGAAAAGTATAGGCAATaGGCAACAAACAAGACGCTA +
Preference number: 2 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKEKYRQ*ATNKTL
Trigger: TAGCGTCTTGTTTGTTGCCCATTGCCTATACTTTTC...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR CAA 90 bp CAAAATGATCTTCTAAGACACAAAAGAGGACTTAAACAGTGTCATTaGTCACTTGCTTTATGCAAACATTCGAGTGTACCTCTTTCACCA +
Preference number: 2 (lower is better)
Translates to: QNDLLRHKRGLKQCH*SLALCKHSSVPLSP
Trigger: TGGTGAAAGAGGTACACTCGAATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTCTTAGAAGATCATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR GCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTAAAGAAAGGAAACAATaGAGACGCCTTTGGACTTCA +
Preference number: 2 (lower is better)
Translates to: DTKEDLNSVICHLLYANIKERKQ*RRLWTS
Trigger: TGAAGTCCAAAGGCGTCTGCATTGTTTCCTTTCTTT...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCATTGAAACAAAGATTTaGTGGCCCAGCCTAATAAAT +
Preference number: 2 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFIETKI*WPSLIN
Trigger: ATTTATTAGGCTGGGCCACCAAATCTTTGTTTCAAT...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR CCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTATTATCTCTTCTCCCTaGAAATGTCTTCAAGGCTCA +
Preference number: 2 (lower is better)
Translates to: DTKEDLNSVICHLLYANIIISSP*KCLQGS
Trigger: TGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAAT...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR GCA 72 bp GAGTGCAGAGGCATGATCTCGGCTTACTGCAGCCTTTaGCTCCTGGGTTCGATTCTCCTGCCTCAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: ECRGMISAYCSL*LLGSILLPQPP
Trigger: GGGAGGCTGAGGCAGGAGAATCGAACCCAGGAGGCAAAGGCTGCAGTAAGCCGAGATCATGCCTCTGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477853.6
3UTR TCA 72 bp GATCCCTCAACCCTAAGTTACTTTGGAGGGAAGCCATaGGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGG +
Preference number: 3 (lower is better)
Translates to: DPSTLSYFGGKP*EAGSVLKPQLR
Trigger: CCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAACTTAGGGTTGAGGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR GCA 72 bp ACATACTCCACCAATCCACCAAACTGCAGCTGTAGCTaGTTATCTGACCCACACTCCCCTGGCTCTCCACTT +
Preference number: 3 (lower is better)
Translates to: TYSTNPPNCSCS*LSDPHSPGSPL
Trigger: AAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCAGTTTGGTGGATTGGTGGAGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR CCA 72 bp AACCCTAAGTTACTTTGGAGGGAAGCCATGAGAGGCTaGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCC +
Preference number: 3 (lower is better)
Translates to: NPKLLWREAMRG*ISPQASAKDGS
Trigger: GGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAACTTAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CAA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTACAATGCAGACGCCTTaGGACTTCAAGAGAAAGCCC +
Preference number: 3 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFTMQTP*DFKRKP
Trigger: GGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATTGT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CAA 90 bp CTTCTGCCGTGCCCTTGTCAACATGGCGCCACAAAATATTCAAAGATGGTAAGAATCAGCCAGGCAGAGTaGGCAATGGTAAGTCTTTCA +
Preference number: 3 (lower is better)
Translates to: LLPCPCQHGATKYSKMVRISQAE*AMVSLS
Trigger: TGAAAGACTTACCATTGCCAACTCTGCCTGGCTGAT...TCTTACCATCTTTGAATATTTTGTGGCGCCATGTTGACAAGGGCACGGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475079.1
3UTR CCA 72 bp GACATCACATATAGATCCCTCAACCCTAAGTTACTTTaGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAA +
Preference number: 3 (lower is better)
Translates to: DITYRSLNPKLL*REAMRGWISPQ
Trigger: TTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAACTTAGGGTTGAGGGATCTATATGTGATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR CCA 72 bp TCTTCCCAGTGCAAAACACCAAATGTACCTATAAGGTaGAGTCGGCAAGGAGAGTTCCCCTCTTACTTTGAA +
Preference number: 3 (lower is better)
Translates to: SSQCKTPNVPIR*SRQGEFPSYFE
Trigger: TTCAAAGTAAGAGGGGAACTCTCCTTGCCGACTCCACCTTATAGGTACATTTGGTGTTTTGCACTGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CAA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCAGTTCCCCTCTTACTTaGAAGCAAGAGATGGAAAAA +
Preference number: 3 (lower is better)
Translates to: MRGWISPQASAKDGSYFFSSPLT*KQEMEK
Trigger: TTTTTCCATCTCTTGCTTCAAAGTAAGAGGGGAACT...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR CCA 72 bp CGTAGTCATAGTCATCCTTCAGAACGTCAAACTGCTTaGATGGGTAGACTCGAGTTTGGTAAATGTCCAAAC +
Preference number: 3 (lower is better)
Translates to: RSHSHPSERQTA*MGRLEFGKCPN
Trigger: GTTTGGACATTTACCAAACTCGAGTCTACCCATCCAAGCAGTTTGACGTTCTGAAGGATGACTATGACTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486238.1
3UTR-3UTR CAA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCGACGCTAGTATGCACTaGGCTTCTGATAAATTGAAA +
Preference number: 3 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLDASMH*ASDKLK
Trigger: TTTCAATTTATCAGAAGCCAAGTGCATACTAGCGTC...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR TCA 72 bp AAGGTGGAGTCGGCAAGGAGAGTTCCCCTCTTACTTTaGAGCAAGAGATGGAAAAAGTCAGAAAGATTTCTA +
Preference number: 3 (lower is better)
Translates to: KVESARRVPLLL*SKRWKKSERFL
Trigger: TAGAAATCTTTCTGACTTTTTCCATCTCTTGCTTCAAAGTAAGAGGGGAACTCTCCTTGCCGACTCCACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR GCA 72 bp AGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATaGAAACATTCGAGTGTACCTCTTTCACCACAGGGC +
Preference number: 3 (lower is better)
Translates to: RGLKQCHLSLAL*KHSSVPLSPQG
Trigger: GCCCTGTGGTGAAAGAGGTACACTCGAATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR CCA 72 bp GTCATAGTCATCCTTCAGAACGTCAAACTGCTTGGATaGGTAGACTCGAGTTTGGTAAATGTCCAAACCATA +
Preference number: 3 (lower is better)
Translates to: VIVILQNVKLLG*VDSSLVNVQTI
Trigger: TATGGTTTGGACATTTACCAAACTCGAGTCTACCCATCCAAGCAGTTTGACGTTCTGAAGGATGACTATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486238.1
3UTR-3UTR CAA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAACAATGCAGACGCCTTaGGACTTCAAGAGAAAGCCC +
Preference number: 3 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKTMQTP*DFKRKP
Trigger: GGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATTGT...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CAA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCAGTTCCCCTCTTACTTaGAAGCAAGAGATGGAAAAA +
Preference number: 3 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFSSPLT*KQEMEK
Trigger: TTTTTCCATCTCTTGCTTCAAAGTAAGAGGGGAACT...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR-3UTR CAA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAGACGCTAGTATGCACTaGGCTTCTGATAAATTGAAA +
Preference number: 3 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKDASMH*ASDKLK
Trigger: TTTCAATTTATCAGAAGCCAAGTGCATACTAGCGTC...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR-3UTR CAA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTTTGGCTTCTGATAAATaGAAACAAAGATTTGGTGGC +
Preference number: 3 (lower is better)
Translates to: DTKEDLNSVICHLLYANILASDK*KQRFGG
Trigger: GCCACCAAATCTTTGTTTCAATTTATCAGAAGCCAA...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCCCGGGAAGCGTCCACTaGGTTGGGCTGGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGPGSVH*VGLGRQ
Trigger: CTGCCTACCCAGCCCAACCCAGTGGACGCTTCCCGG...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACTCCACTGGGTTGGGCTaGGTAGGCAGGACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHSTGLG*VGRTRG
Trigger: ACCCCGGGTCCTGCCTACCCAGCCCAACCCAGTGGA...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCGGCCAGCAGATCACTTaGGGCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGGQQIT*GQEFET
Trigger: GGTCTCGAACTCCTGGCCTCAAGTGATCTGCTGGCC...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCGCAAGGACTGCAAGATaGGGCGCTTCAGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGARTAR*GASALG
Trigger: CCCCAGTGCTGAAGCGCCCCATCTTGCAGTCCTTGC...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCTGCCCACTGGAGAGGTaGTGGAGGGCAAGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGCPLER*WRASVV
Trigger: GACTACACTTGCCCTCCATCACCTCTCCAGTGGGCA...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp AGGCCCCCGATGTTAGTCTCCCAGGAACGCATGATTCGGCCTCCATTGGACACAATCCACAGCCCCTTCTaGCGTGCCCTTGTCAACATG +
Preference number: 4 (lower is better)
Translates to: RPPMLVSQERMIRPPLDTIHSPF*RALVNM
Trigger: CATGTTGACAAGGGCACGGCAGAAGGGGCTGTGGAT...TGTGTCCAATGGAGGCCGAATCATGCGTTCCTGGGAGACTAACATCGGGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR GCA 90 bp GGACACAGTGATCACATCCTGTCCGTGCAGCAGCATGGCATCCACAGCCCCTTCATCACATCCTGTCCGTaGAGCAGCATGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: GHSDHILSVQQHGIHSPFITSCP*SSMAST
Trigger: TGTGGATGCCATGCTGCTGCACGGACAGGATGTGAT...GAAGGGGCTGTGGATGCCATGCTGCTGCACGGACAGGATGTGATCACTGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR GCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCGCCAACCAGCCCAAGTaGCTGGAAACTGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGANQPK*LETATV
Trigger: GACAGTGGCAGTTTCCAGGCACTTGGGCTGGTTGGC...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGCCGACAGGCCATGACTaGAGCCACCGTCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKPTGHD*SHRLLP
Trigger: GGGGAGAAGACGGTGGCTGCAGTCATGGCCTGTCGG...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACCAGCAGGGTGCACTGTaGGGGATGGGGGAAATGAGC +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHQQGAL*GMGEMS
Trigger: GCTCATTTCCCCCATCCCCCACAGTGCACCCTGCTG...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGGGGCGCTTCAGCACTaGGGGAGCTACCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKGALQH*GSYLTP
Trigger: TGGAGTCAGGTAGCTCCCCCAGTGCTGAAGCGCCCC...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCCCACGGCCAGCAGGTTaGGGTTCAGGCTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGPRPAG*GSGSCR
Trigger: TCTACAAGAGCCTGAACCCCAACCTGCTGGCCGTGG...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp AGTTTGGTAAATGTCCAAACCATAGGCCACAACCAAACAAGTGGACTCCAGACCGACTGCTGGAGGACCTaGGGCAGCTGGGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: SLVNVQTIGHNQTSGLQTDCWRT*GSWGRS
Trigger: GGACCGCCCCCAGCTGCCCCAGGTCCTCCAGCAGTC...GGTCTGGAGTCCACTTGTTTGGTTGTGGCCTATGGTTTGGACATTTACCAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486238.1
CDS-3UTR TCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACGATGTTCCACCCACTTaGGGTGCCCACTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHDVPPT*GAHWRG
Trigger: ACCTCTCCAGTGGGCACCTCAAGTGGGTGGAACATC...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTGGCGGTCCAGGGAGCTaGAGGCGGTGGCGTTGTATT +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFGGPGS*RRWRCI
Trigger: AATACAACGCCACCGCCTTCAGCTCCCTGGACCGCC...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGAGTCCCAGCTGCTTGTaGGGTGGAGGTTGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKSPSCL*GGGCRE
Trigger: CTCACGGCAACCTCCACCTCACAAGCAGCTGGGACT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACCAGGCTCCAGACAGGTaGTGCAGCCACGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHQAPDR*CSHGVE
Trigger: TTCAACTCCGTGGCTGCAGCACCTGTCTGGAGCCTG...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCCCGGGAAGCGTCCACTaGGTTGGGCTGGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFPGSVH*VGLGRQ
Trigger: CTGCCTACCCAGCCCAACCCAGTGGACGCTTCCCGG...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTGACTGCTGGAGGACCTaGGGCAGCTGGGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFDCWRT*GSWGRS
Trigger: GGACCGCCCCCAGCTGCCCCAGGTCCTCCAGCAGTC...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATGATTCGGCCTCCATTGGACACAGTGATCACATCCTGTCCGTGCAGCAGCATGTCTCCCAGGAACGCATaGTTCGGCCTCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: MIRPPLDTVITSCPCSSMSPRNA*FGLHWT
Trigger: TGTCCAATGGAGGCCGAATCATGCGTTCCTGGGAGA...CATGCTGCTGCACGGACAGGATGTGATCACTGTGTCCAATGGAGGCCGAATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR TCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGCATTCCGACAGGCCATaGCTGCAGCCACCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKHSDRP*LQPPSS
Trigger: AGAAGACGGTGGCTGCAGTCATGGCCTGTCGGAATG...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCAGCCCGGTAGCCCACTaGGTCATCCTTCTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGSPVAH*VILLQE
Trigger: TTCTTGAAGAAGGATGACTCAGTGGGCTACCGGGCT...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACTGCAGCAGGATAAGCTaGGACGAGAGGCGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHCSRIS*DERRFR
Trigger: CCTGAAACGCCTCTCGTCTCAGCTTATCCTGCTGCA...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCCCCATCAGGAATCTCTaGGAGTGTCAGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGPIRNL*ECQLRE
Trigger: CTCTCTCAGCTGACACTCTCAGAGATTCCTGATGGG...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCGAGGTGGGAAGTCCATaGTTGCAGCAGGATAAGCTG +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGEVGSP*LQQDKL
Trigger: CAGCTTATCCTGCTGCAAGCATGGACTTCCCACCTC...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTCATGGTGCGCGTCTGTaGTCTCTGTCACCACGGCCA +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFHGARL*SLSPRP
Trigger: TGGCCGTGGTGACAGAGAGCACAGACGCGCACCATG...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGATGTTCATGGCTCACTaGAGCCTCGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKMFMAH*SLDLPG
Trigger: GCCTGGGAGGTCGAGGCTGCAGTGAGCCATGAACAT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS-3UTR CCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGCCGTCTTCTCCCCAGTaGTGGCAAAGCTCACTAGGG +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKPSSPQ*WQSSLG
Trigger: CCCTAGTGAGCTTTGCCACCACTGGGGAGAAGACGG...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTCAGCAGGGTGCACTGTaGGGGATGGGGGAAATGAGC +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFQQGAL*GMGEMS
Trigger: GCTCATTTCCCCCATCCCCCACAGTGCACCCTGCTG...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCGGGGCGCTTCAGCACTaGGGGAGCTACCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFGALQH*GSYLTP
Trigger: TGGAGTCAGGTAGCTCCCCCAGTGCTGAAGCGCCCC...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTGCAAGGACTGCAAGATaGGGCGCTTCAGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFARTAR*GASALG
Trigger: CCCCAGTGCTGAAGCGCCCCATCTTGCAGTCCTTGC...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACGATCCGCTGTACTTCTaGGGGAATGGTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHDPLYF*GNGQLP
Trigger: TGGGAGCTGACCATTCCCCCAGAAGTACAGCGGATC...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAGACTGCTGGAGGACCTaGGGCAGCTGGGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQDCWRT*GSWGRS
Trigger: GGACCGCCCCCAGCTGCCCCAGGTCCTCCAGCAGTC...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACGACTGCTGGAGGACCTaGGGCAGCTGGGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNDCWRT*GSWGRS
Trigger: GGACCGCCCCCAGCTGCCCCAGGTCCTCCAGCAGTC...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACCTGGTCTGGAACTCCTaGGCTCAAGAGATCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHLVWNS*AQEILH
Trigger: GTGGAGGATCTCTTGAGCCCAGGAGTTCCAGACCAG...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR CAA 72 bp ATGTTAGTCTCCCAGGAACGCATGATTCGGCCTCCATaGGACACAGTGATCACATCCTGTCCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MLVSQERMIRPP*DTVITSCPCSS
Trigger: GCTGCTGCACGGACAGGATGTGATCACTGTGTCCAATGGAGGCCGAATCATGCGTTCCTGGGAGACTAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTCATTCCGACAGGCCATaGCTGCAGCCACCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFHSDRP*LQPPSS
Trigger: AGAAGACGGTGGCTGCAGTCATGGCCTGTCGGAATG...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTGGGGGATGGGGGAAATaGGCAGTAGTTCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFGGWGK*AVVLWT
Trigger: GGTCCAGAGAACTACTGCTCATTTCCCCCATCCCCC...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGTTTGGAGGGAAGCCATaGGAGGCTGGATCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKFGGKP*EAGSVL
Trigger: GAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAA...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGATCCACAGCCCCTTCTaGCGTGCCCTTGTCAACATG +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKIHSPF*RALVNM
Trigger: CATGTTGACAAGGGCACGGCAGAAGGGGCTGTGGAT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACTACCTTACAGACTCCTaGAGGCCAACCAGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHYLTDS*RPTSPS
Trigger: ACTTGGGCTGGTTGGCCTGCAGGAGTCTGTAAGGTA...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCCGACAGGCCATGACTaGAGCCACCGTCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLPTGHD*SHRLLP
Trigger: GGGGAGAAGACGGTGGCTGCAGTCATGGCCTGTCGG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTTCTTGTAGAGCACACTaGGGTCCCCCATCACACGGC +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFSCRAH*GPPSHG
Trigger: GCCGTGTGATGGGGGACCGCAGTGTGCTCTACAAGA...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTAGGACCACAGGCACATaGCACCAGGCCCGGCTAATT +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFRTTGT*HQARLI
Trigger: AATTAGCCGGGCCTGGTGGCATGTGCCTGTGGTCCT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS-3UTR CCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTGGGGCGCTTCAGCACTaGGGGAGCTACCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIGALQH*GSYLTP
Trigger: TGGAGTCAGGTAGCTCCCCCAGTGCTGAAGCGCCCC...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCGCAAGGACTGCAAGATaGGGCGCTTCAGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFARTAR*GASALG
Trigger: CCCCAGTGCTGAAGCGCCCCATCTTGCAGTCCTTGC...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCTATGGACAGGGCCTTTaGCTTTCTTCTGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGYGQGL*LSSAQR
Trigger: CCTCTGTGCAGAAGAAAGCCAAAGGCCCTGTCCATA...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
3UTR CAA 72 bp AGCAGCATGGCATCCACAGCCCCTTCTGCCGTGCCCTaGTCAACATGGCGCCACAAAATATTCAAAGATGGT +
Preference number: 4 (lower is better)
Translates to: SSMASTAPSAVP*STWRHKIFKDG
Trigger: ACCATCTTTGAATATTTTGTGGCGCCATGTTGACAAGGGCACGGCAGAAGGGGCTGTGGATGCCATGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR TCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGGATGTTCCACCCACTTaGGGTGCCCACTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVDVPPT*GAHWRG
Trigger: ACCTCTCCAGTGGGCACCTCAAGTGGGTGGAACATC...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTCTGCAGCCACGGAGTTaGAACCCTAACCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFLQPRS*NPNLLN
Trigger: GTTCAGCAGGTTAGGGTTTCAACTCCGTGGCTGCAG...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCAGTTTGGAGGGAACGTaGGCTCGGGTCAGGACACAC +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFSLEGT*ARVRTH
Trigger: GTGTGTCCTGACCCGAGCTCACGTTCCCTCCAAACT...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACCGAAAAGCTCCCCATTaGCCCATCTTCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHRKAPH*PIFRTA
Trigger: AGCAGTTCTGAAGATGGGTCAATGGGGAGCTTTTCG...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACTGGTGTAGGTCTGATTaGAGCAAGCCAGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHWCRSD*SKPESP
Trigger: AGGACTCTCTGGCTTGCTTCAATCAGACCTACACCA...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGAGCCCGGTAGCCCACTaGGTCATCCTTCTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKSPVAH*VILLQE
Trigger: TTCTTGAAGAAGGATGACTCAGTGGGCTACCGGGCT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACTCATCTTCTGGAGGTTaGATTCATCTCTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHSSSGG*IHLWPG
Trigger: CCCTGGCCAGAGATGAATTCAACCTCCAGAAGATGA...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACGCCAAAAAGCTTGCCTaGGGCTGTTACCATCACCAT +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHAKKLA*GCYHHH
Trigger: ATGGTGATGGTAACAGCCTCAGGCAAGCTTTTTGGC...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCGGGGGATGGGGGAAATaGGCAGTAGTTCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFGGWGK*AVVLWT
Trigger: GGTCCAGAGAACTACTGCTCATTTCCCCCATCCCCC...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACCGTAGTCTTGATCCATaGCTGGGAGAAGCAAGGACT +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHRSLDP*LGEART
Trigger: AGTCCTTGCTTCTCCCAGTCATGGATCAAGACTACG...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGTTTCCCCTTCACCTTaGCGATCCGCTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKVSPSP*RSAVLL
Trigger: CAGAAGTACAGCGGATCGTCAAGGTGAAGGGGAAAC...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCACACGGCCCTGGGAATaGACGTGCTCACTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLTRPWE*TCSLLR
Trigger: ACGCAGCAGTGAGCACGTTCATTCCCAGGGCCGTGT...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTACACGGCCCTGGGAATaGACGTGCTCACTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYITRPWE*TCSLLR
Trigger: ACGCAGCAGTGAGCACGTTCATTCCCAGGGCCGTGT...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGTTCTGCACAGAGGAGTaGATGATACGCCCAGTGACG +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKFCTEE*MIRPVT
Trigger: CGTCACTGGGCGTATCATTCACTCCTCTGTGCAGAA...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCTTCTTAGCTGAGCACTaGCACACACACATACTCCAC +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGFLAEH*HTHILH
Trigger: GTGGAGTATGTGTGTGTGTCAGTGCTCAGCTAAGAA...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTTTTGGAGGGAAGCCATaGGAGGCTGGATCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFFGGKP*EAGSVL
Trigger: GAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAA...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCGCCCAGCCTAATAAATaGCAGCACGAAACTAGAGGT +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGAQPNK*QHETRG
Trigger: ACCTCTAGTTTCGTGCTGTCATTTATTAGGCTGGGC...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCGCTCCAGACAGGTGCTaGAGCCACGGAGTTGAAACC +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFAPDRC*SHGVET
Trigger: GGTTTCAACTCCGTGGCTGCAGCACCTGTCTGGAGC...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCTGGCTTGGGGACAAGTaGAGGAAGAACTGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLWLGDK*RKNWAR
Trigger: CCGGGCCCAGTTCTTCCTGCACTTGTCCCCAAGCCA...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGAGGTGGGAAGTCCATaGTTGCAGCAGGATAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKEVGSP*LQQDKL
Trigger: CAGCTTATCCTGCTGCAAGCATGGACTTCCCACCTC...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCATGGTGCGCGTCTGTaGTCTCTGTCACCACGGCCA +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLHGARL*SLSPRP
Trigger: TGGCCGTGGTGACAGAGAGCACAGACGCGCACCATG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCAAGGTGCGCTCATGGTaGGCGTCTGTGCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFKVRSW*ASVLSV
Trigger: GACAGAGAGCACAGACGCGCACCATGAGCGCACCTT...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACGCTATACACACAGTATaGCAGTTTCCCACCCCTACC +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHAIHTV*QFPTPT
Trigger: GGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGC...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAGTCCGTGCAGCAGCATaGCATCCACAGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSVRAAA*HPQPLL
Trigger: CAGAAGGGGCTGTGGATGCCATGCTGCTGCACGGAC...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCGATGCTGTCACTTTCTaGGAGATGTTCCACCCACTT +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGDAVTF*EMFHPL
Trigger: AAGTGGGTGGAACATCTCCCAGAAAGTGACAGCATC...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTTCCAGAGCCAAAGTTTaGAGGGAACGTGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFSRAKV*RERELG
Trigger: CCCGAGCTCACGTTCCCTCCAAACTTTGGCTCTGGA...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGGCAGGACCCGGGGTTaGAATCCACTTCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKGRTRG*NPLPNS
Trigger: AGAATTTGGAAGTGGATTCCAACCCCGGGTCCTGCC...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTTCTTCTCCCCAGTGGTaGCAAAGCTCACTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFSSPQW*QSSLGQ
Trigger: CTGCCCTAGTGAGCTTTGCCACCACTGGGGAGAAGA...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGTACTTCTGGGGGAATaGTCAGCTCCCAACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKVLLGE*SAPNSA
Trigger: AGCTGAGTTGGGAGCTGACCATTCCCCCAGAAGTAC...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGATAAAGGTGCGCTCATaGTGCGCGTCTGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKIKVRS*CASVLS
Trigger: AGAGAGCACAGACGCGCACCATGAGCGCACCTTTAT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGAAGCCATGAGAGGCTaGATCAGTCCTCAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKEAMRG*ISPQAS
Trigger: TGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTC...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACCCAAGGAGGCAAACTTaGCCTTCCCAACATATTGCT +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHPRRQT*PSQHIA
Trigger: AGCAATATGTTGGGAAGGTCAAGTTTGCCTCCTTGG...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCTCTCCCAGGAACGCATaGTTCGGCCTCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFSPRNA*FGLHWT
Trigger: TGTCCAATGGAGGCCGAATCATGCGTTCCTGGGAGA...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCTGCCCACTGGAGAGGTaGTGGAGGGCAAGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLCPLER*WRASVV
Trigger: GACTACACTTGCCCTCCATCACCTCTCCAGTGGGCA...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCATGCCCACTGGAGAGGTaGTGGAGGGCAAGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSCPLER*WRASVV
Trigger: GACTACACTTGCCCTCCATCACCTCTCCAGTGGGCA...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCCTGCAGCCACGGAGTTaGAACCCTAACCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFLQPRS*NPNLLN
Trigger: GTTCAGCAGGTTAGGGTTTCAACTCCGTGGCTGCAG...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGTTTGGAGGGAACGTaGGCTCGGGTCAGGACACAC +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSSLEGT*ARVRTH
Trigger: GTGTGTCCTGACCCGAGCTCACGTTCCCTCCAAACT...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CTGCTTGGATGGGTAGACTCGAGTTTGGTAAATGTCCAAACCATAGGCCACAACTGGCCTCCATGGCACTaGTGGAGGACGGGAAGATAT +
Preference number: 4 (lower is better)
Translates to: LLGWVDSSLVNVQTIGHNWPPWH*WRTGRY
Trigger: ATATCTTCCCGTCCTCCATCAGTGCCATGGAGGCCA...GTTGTGGCCTATGGTTTGGACATTTACCAAACTCGAGTCTACCCATCCAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486238.1
CDS-3UTR TCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACGCCCAGCCTAATAAATaGCAGCACGAAACTAGAGGT +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHAQPNK*QHETRG
Trigger: ACCTCTAGTTTCGTGCTGTCATTTATTAGGCTGGGC...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCGTCTCCAATCAAACTTaGCCACTTGGTCTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGVSNQT*PLGLRR
Trigger: TCTACGAAGACCAAGTGGGCAAGTTTGATTGGAGAC...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTGCCAACCAGCCCAAGTaGCTGGAAACTGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIANQPK*LETATV
Trigger: GACAGTGGCAGTTTCCAGGCACTTGGGCTGGTTGGC...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCGCTCCAGACAGGTGCTaGAGCCACGGAGTTGAAACC +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLAPDRC*SHGVET
Trigger: GGTTTCAACTCCGTGGCTGCAGCACCTGTCTGGAGC...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTGCTCCAGACAGGTGCTaGAGCCACGGAGTTGAAACC +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIAPDRC*SHGVET
Trigger: GGTTTCAACTCCGTGGCTGCAGCACCTGTCTGGAGC...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAACCGACAGGCCATGACTaGAGCCACCGTCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQPTGHD*SHRLLP
Trigger: GGGGAGAAGACGGTGGCTGCAGTCATGGCCTGTCGG...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGCCCCAGCAAGCCATCTaGCTTTTTGCCAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKPQQAI*LFAKFS
Trigger: GGAGAATTTGGCAAAAAGGCAGATGGCTTGCTGGGG...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCGGGAGAAGCAAGGACTaGAAGATGGGGCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLGRSKD*KMGRFS
Trigger: GCTGAAGCGCCCCATCTTGCAGTCCTTGCTTCTCCC...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAGGGAGAAGCAAGGACTaGAAGATGGGGCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSGRSKD*KMGRFS
Trigger: GCTGAAGCGCCCCATCTTGCAGTCCTTGCTTCTCCC...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGAATGAACGTGCTCACTaGTGCGTTTCCCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKNERAH*CVSPSP
Trigger: AGGTGAAGGGGAAACGCAGCAGTGAGCACGTTCATT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCTCTTGTAGAGCACACTaGGGTCCCCCATCACACGGC +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLSCRAH*GPPSHG
Trigger: GCCGTGTGATGGGGGACCGCAGTGTGCTCTACAAGA...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCATCTTGTAGAGCACACTaGGGTCCCCCATCACACGGC +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSSCRAH*GPPSHG
Trigger: GCCGTGTGATGGGGGACCGCAGTGTGCTCTACAAGA...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACCAGGAGCTTCACCTGTaGCAGTCTCTTAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHQELHL*QSLSDH
Trigger: ATGATCACTAAGAGACTGGCACAGGTGAAGCTCCTG...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCACCAATCCACCAAACTaGAGCTGTAGCTGCTTATCT +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGTNPPN*SCSCLS
Trigger: AGATAAGCAGCTACAGCTGCAGTTTGGTGGATTGGT...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp AGGCCACAACCAAACAAGTGGACTCCAGACCCGAGGGAGCTGTGTAGATACCTCGTTGATGAATCGCTCTaGGTGTATCTGTACATCTGC +
Preference number: 4 (lower is better)
Translates to: RPQPNKWTPDPRELCRYLVDESL*VYLYIC
Trigger: GCAGATGTACAGATACACGCAGAGCGATTCATCAAC...GAGGTATCTACACAGCTCCCTCGGGTCTGGAGTCCACTTGTTTGGTTGTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486238.1
CDS-3UTR CCA 90 bp GACACAGTGATCACATCCTGTCCGTGCAGCAGCATGGCATCCACAGCCCCTTCTTCACATTCTTCTCTGTaGCTACAACCAACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: DTVITSCPCSSMASTAPSSHSSL*LQPTSW
Trigger: CCAAGAAGTTGGTTGTAGCCACAGAGAAGAATGTGA...AGAAGGGGCTGTGGATGCCATGCTGCTGCACGGACAGGATGTGATCACTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR CCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTGGCAGGACCCGGGGTTaGAATCCACTTCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFGRTRG*NPLPNS
Trigger: AGAATTTGGAAGTGGATTCCAACCCCGGGTCCTGCC...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGACTGTTTCCACAGGATaGTGCCAGAGCTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKTVSTG*CQSCSQ
Trigger: TTGAGAGCAGCTCTGGCACCATCCTGTGGAAACAGT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTCCACGGCCAGCAGGTTaGGGTTCAGGCTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIPRPAG*GSGSCR
Trigger: TCTACAAGAGCCTGAACCCCAACCTGCTGGCCGTGG...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCCGTTGCGCCGAGCCTTaGTGTTCCAGTACTGGTACA +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFRCAEP*CSSTGT
Trigger: TGTACCAGTACTGGAACACCAAGGCTCGGCGCAACG...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGCGTTGCGCCGAGCCTTaGTGTTCCAGTACTGGTACA +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVRCAEP*CSSTGT
Trigger: TGTACCAGTACTGGAACACCAAGGCTCGGCGCAACG...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGCCACAACCAAACAAGTaGACTCCAGACCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVPQPNK*TPDPRE
Trigger: CTCCCTCGGGTCTGGAGTCCACTTGTTTGGTTGTGG...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCCCACAACCAAACAAGTaGACTCCAGACCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFPQPNK*TPDPRE
Trigger: CTCCCTCGGGTCTGGAGTCCACTTGTTTGGTTGTGG...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACAACCCTAAGTTACTTTaGAGGGAAGCCATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHNPKLL*REAMRG
Trigger: GCCTCTCATGGCTTCCCTCCAAAGTAACTTAGGGTT...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCGTAGCAGAGACACAGTaGCCTAGCCAATCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFVAETQ*PSQSAV
Trigger: CACTGCCGATTGGCTAGGCCACTGTGTCTCTGCTAC...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp AGGCCCCCGATGTTAGTCTCCCAGGAACGCATGATTCGGCCTCCATTGGACACAGTGCCCTTGTCAACATaGCGCCACAAAATATTCAAA +
Preference number: 4 (lower is better)
Translates to: RPPMLVSQERMIRPPLDTVPLST*RHKIFK
Trigger: TTTGAATATTTTGTGGCGCCATGTTGACAAGGGCAC...TGTGTCCAATGGAGGCCGAATCATGCGTTCCTGGGAGACTAACATCGGGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCTCTCCCAGGAACGCATaGTTCGGCCTCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLSPRNA*FGLHWT
Trigger: TGTCCAATGGAGGCCGAATCATGCGTTCCTGGGAGA...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCCAATGTTCACATGGCTaGAGGGAACAACTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFQCSHG*REQLRG
Trigger: CCCTCGGAGTTGTTCCCTTCAGCCATGTGAACATTG...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTGCAGCAGGATAAGCTaGGACGAGAGGCGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYICSRIS*DERRFR
Trigger: CCTGAAACGCCTCTCGTCTCAGCTTATCCTGCTGCA...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGACTGGGGGAGCTACCTaGCTCCACTTCCCAAAAATG +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVTGGAT*LHFPKM
Trigger: CATTTTTGGGAAGTGGAGTCAGGTAGCTCCCCCAGT...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTCGTAGTCTTGATCCATaGCTGGGAGAAGCAAGGACT +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFRSLDP*LGEART
Trigger: AGTCCTTGCTTCTCCCAGTCATGGATCAAGACTACG...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTAACTCAGCTCAGTGGTaGGATCCTTTCGAAGCCGAT +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFNSAQW*DPFEAD
Trigger: ATCGGCTTCGAAAGGATCTCACCACTGAGCTGAGTT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGGTTTCCCCTTCACCTTaGCGATCCGCTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVVSPSP*RSAVLL
Trigger: CAGAAGTACAGCGGATCGTCAAGGTGAAGGGGAAAC...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGTTCTGCACAGAGGAGTaGATGATACGCCCAGTGACG +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVFCTEE*MIRPVT
Trigger: CGTCACTGGGCGTATCATTCACTCCTCTGTGCAGAA...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGCCTACAGTTCTTAGCTaGGCACTGACACACACACAT +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKPTVLS*ALTHTH
Trigger: ATGTGTGTGTGTCAGTGCTCAGCTAAGAACTGTAGG...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGAAAAGGAGTTCTGCGTaGAGGTCATCCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKKRSSA*RSSIFP
Trigger: AGGGAAGATGGATGACCTTCACGCAGAACTCCTTTT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTTCTGAGAGTGTCAGCTaGGAGAGTTCTGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFSESVS*ESSVSL
Trigger: GAGAGAGACAGAACTCTCTCAGCTGACACTCTCAGA...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTCTCCATTGGACACAGTaGTCACATAGATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFLHWTQ*SHRSPQ
Trigger: CTGGGGAGATCTATGTGATCACTGTGTCCAATGGAG...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375208.7
CDS-3UTR TCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCATGTTCGAGGCTGCAGTaGGCTATGACTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSCSRLQ*AMTVPL
Trigger: CAGTGGCACAGTCATAGCTCACTGCAGCCTCGAACA...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCATCCACAGCCCCTTCTaGCGTGCCCTTGTCAACATG +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLIHSPF*RALVNM
Trigger: CATGTTGACAAGGGCACGGCAGAAGGGGCTGTGGAT...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCAGCACCACCTTCCCTaGCAACTGCTGCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLQHHLP*QLLQEK
Trigger: CTTTTCCTGCAGCAGTTGGCAGGGAAGGTGGTGCTG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTAATGAACGTGCTCACTaGTGCGTTTCCCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFNERAH*CVSPSP
Trigger: AGGTGAAGGGGAAACGCAGCAGTGAGCACGTTCATT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAACATGGTGCGCGTCTGTaGTCTCTGTCACCACGGCCA +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQHGARL*SLSPRP
Trigger: TGGCCGTGGTGACAGAGAGCACAGACGCGCACCATG...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACTCCCAAAAGGAGTTCTaGGTGAAGGTCATCCATCTT +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHSQKEF*VKVIHL
Trigger: AAGATGGATGACCTTCACGCAGAACTCCTTTTGGGA...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGCTAGCCAATCGGCAGTaGTATACACACAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKLANRQ*YTHSMP
Trigger: TGGCATACTGTGTGTATAGCACTGCCGATTGGCTAG...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGAACTGCTACTTTTCTaGACTTCATTCCGACAGGCC +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKELLLF*TSFRQA
Trigger: GGCCTGTCGGAATGAAGTGCAGAAAAGTAGCAGTTC...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTTGCCCAGACTGGAGTaGAGAGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYILPRLE*RGMISA
Trigger: AGCCGAGATCATGCCTCTGCACTCCAGTCTGGGCAA...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS-3UTR CCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAGTCCGTGCAGCAGCATaGCATCCACAGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQVRAAA*HPQPLL
Trigger: CAGAAGGGGCTGTGGATGCCATGCTGCTGCACGGAC...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCTCTTCTCCCCAGTGGTaGCAAAGCTCACTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLSSPQW*QSSLGQ
Trigger: CTGCCCTAGTGAGCTTTGCCACCACTGGGGAGAAGA...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCGATCCGCTGTACTTCTaGGGGAATGGTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLDPLYF*GNGQLP
Trigger: TGGGAGCTGACCATTCCCCCAGAAGTACAGCGGATC...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACTCGAGTTTGGTAAATGTCCAAACCATAGGCCACAACCAAACAAGTGGACTCCCACAACCAAACAAGTaGACTCCAGACCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: DSSLVNVQTIGHNQTSGLPQPNK*TPDPRE
Trigger: CTCCCTCGGGTCTGGAGTCCACTTGTTTGGTTGTGG...GAGTCCACTTGTTTGGTTGTGGCCTATGGTTTGGACATTTACCAAACTCGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486238.1
CDS-3UTR TCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTTCTCCCAGGAACGCATaGTTCGGCCTCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFSPRNA*FGLHWT
Trigger: TGTCCAATGGAGGCCGAATCATGCGTTCCTGGGAGA...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAGATGTTCCACCCACTTaGGGTGCCCACTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQDVPPT*GAHWRG
Trigger: ACCTCTCCAGTGGGCACCTCAAGTGGGTGGAACATC...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCAATGTTCACATGGCTaGAGGGAACAACTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLQCSHG*REQLRG
Trigger: CCCTCGGAGTTGTTCCCTTCAGCCATGTGAACATTG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAAGTTTGGAGGGAACGTaGGCTCGGGTCAGGACACAC +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQSLEGT*ARVRTH
Trigger: GTGTGTCCTGACCCGAGCTCACGTTCCCTCCAAACT...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCTGGTGTAGGTCTGATTaGAGCAAGCCAGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFWCRSD*SKPESP
Trigger: AGGACTCTCTGGCTTGCTTCAATCAGACCTACACCA...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGCCCGGTAGCCCACTaGGTCATCCTTCTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSSPVAH*VILLQE
Trigger: TTCTTGAAGAAGGATGACTCAGTGGGCTACCGGGCT...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGTCATCTTCTGGAGGTTaGATTCATCTCTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVSSSGG*IHLWPG
Trigger: CCCTGGCCAGAGATGAATTCAACCTCCAGAAGATGA...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAGGGGGATGGGGGAAATaGGCAGTAGTTCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQGGWGK*AVVLWT
Trigger: GGTCCAGAGAACTACTGCTCATTTCCCCCATCCCCC...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCTCCCAAAAATGGGATTaGAGACATACAGAGAACTCA +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGSQKWD*RHTENS
Trigger: TGAGTTCTCTGTATGTCTTCAATCCCATTTTTGGGA...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTACACGGCCCTGGGAATaGACGTGCTCACTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFTRPWE*TCSLLR
Trigger: ACGCAGCAGTGAGCACGTTCATTCCCAGGGCCGTGT...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTTTCTTAGCTGAGCACTaGCACACACACATACTCCAC +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFFLAEH*HTHILH
Trigger: GTGGAGTATGTGTGTGTGTCAGTGCTCAGCTAAGAA...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTAAAAGGAGTTCTGCGTaGAGGTCATCCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFKRSSA*RSSIFP
Trigger: AGGGAAGATGGATGACCTTCACGCAGAACTCCTTTT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTAGCCTGTGGGTGAAATaGGAGATTATCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFSLWVK*EIISSP
Trigger: GGGAGAAGAGATAATCTCTCATTTCACCCACAGGCT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGAGACCAGCCTGTGGGTaGAATGAGAGATTATCTCTT +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKRPACG*NERLSL
Trigger: AAGAGATAATCTCTCATTTCACCCACAGGCTGGTCT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAATCACATCCTGTCCGTaGAGCAGCATGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSITSCP*SSMAST
Trigger: TGTGGATGCCATGCTGCTGCACGGACAGGATGTGAT...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCTACCTTACAGACTCCTaGAGGCCAACCAGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLYLTDS*RPTSPS
Trigger: ACTTGGGCTGGTTGGCCTGCAGGAGTCTGTAAGGTA...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGACCTTCCCTGCCAACTaGTGCAGGAAAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVTFPAN*CRKSSR
Trigger: TCTGCTACTTTTCCTGCAGCAGTTGGCAGGGAAGGT...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGTTGATGAATCGCTCTaGGTGTATCTGTACATCTGG +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKVDESL*VYLYIW
Trigger: CCAGATGTACAGATACACGCAGAGCGATTCATCAAC...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCGCTATACACACAGTATaGCAGTTTCCCACCCCTACC +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFAIHTV*QFPTPT
Trigger: GGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGC...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACTTCCTCTTCCTTCTCTaGCATAATCTACCATCAGCA +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHFLFLL*HNLPSA
Trigger: TGCTGATGGTAGATTATGGCAGAGAAGGAAGAGGAA...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGTTGACAATGTTCACATaGCTGAAGGGAACAACTCCG +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKLTMFT*LKGTTP
Trigger: CGGAGTTGTTCCCTTCAGCCATGTGAACATTGTCAA...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAGGCAGGACCCGGGGTTaGAATCCACTTCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSGRTRG*NPLPNS
Trigger: AGAATTTGGAAGTGGATTCCAACCCCGGGTCCTGCC...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAATCCACTGGGTTGGGCTaGGTAGGCAGGACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKSTGLG*VGRTRG
Trigger: ACCCCGGGTCCTGCCTACCCAGCCCAACCCAGTGGA...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGACTGTTTCCACAGGATaGTGCCAGAGCTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVTVSTG*CQSCSQ
Trigger: TTGAGAGCAGCTCTGGCACCATCCTGTGGAAACAGT...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAGTACTTCTGGGGGAATaGTCAGCTCCCAACTCAGCT +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSVLLGE*SAPNSA
Trigger: AGCTGAGTTGGGAGCTGACCATTCCCCCAGAAGTAC...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCTATGGACAGGGCCTTTaGCTTTCTTCTGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFYGQGL*LSSAQR
Trigger: CCTCTGTGCAGAAGAAAGCCAAAGGCCCTGTCCATA...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTTCTGAATGCACGATATaGACAGGGCCTTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFSECTI*TGPLAF
Trigger: GAAAGCCAAAGGCCCTGTCCATATCGTGCATTCAGA...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGTCAAACTGCTTGGATaGGTAGACTCGAGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKVKLLG*VDSSLV
Trigger: TACCAAACTCGAGTCTACCCATCCAAGCAGTTTGAC...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTAGAGATCCTCCACTATaGCCTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIRDPPL*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCATAGTGGAGGATCTCT...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CAGCCAGGCAGAGTTGGCAATGGTAAGTCTTTCATCCCTGAGGCAGCCAGTAGAAGGAGAGGCATCTTTTaGCCAACATGTTCCTTATTC +
Preference number: 4 (lower is better)
Translates to: QPGRVGNGKSFIPEAASRRRGIF*PTCSLF
Trigger: GAATAAGGAACATGTTGGCCAAAAGATGCCTCTCCT...TCTACTGGCTGCCTCAGGGATGAAAGACTTACCATTGCCAACTCTGCCTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR CCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACGCAGCCTTTGCCTCCTaGGTTCGATTCTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNAAFAS*VRFSCL
Trigger: GAGGCAGGAGAATCGAACCCAGGAGGCAAAGGCTGC...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS-3UTR TCA 90 bp ACTAGGAGAGGCATCTTTTGGCCAACATGTTCCTTATTCAGGAATCAGCCAGGCCCAAGGAGGCAAACTTaGCCTTCCCAACATATTGCT +
Preference number: 4 (lower is better)
Translates to: TRRGIFWPTCSLFRNQPGPRRQT*PSQHIA
Trigger: AGCAATATGTTGGGAAGGTCAAGTTTGCCTCCTTGG...GCCTGGCTGATTCCTGAATAAGGAACATGTTGGCCAAAAGATGCCTCTCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAACTGCAGCCACGGAGTTaGAACCCTAACCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQLQPRS*NPNLLN
Trigger: GTTCAGCAGGTTAGGGTTTCAACTCCGTGGCTGCAG...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCGAAAAGCTCCCCATTaGCCCATCTTCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLRKAPH*PIFRTA
Trigger: AGCAGTTCTGAAGATGGGTCAATGGGGAGCTTTTCG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCATCTCATTCTTAATCTaGCTCCGGGGCTTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLISFLI*LRGFRA
Trigger: TGCTCGGAAGCCCCGGAGTCAGATTAAGAATGAGAT...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAATCTCATTCTTAATCTaGCTCCGGGGCTTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSISFLI*LRGFRA
Trigger: TGCTCGGAAGCCCCGGAGTCAGATTAAGAATGAGAT...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCGCCAAAAAGCTTGCCTaGGGCTGTTACCATCACCAT +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLAKKLA*GCYHHH
Trigger: ATGGTGATGGTAACAGCCTCAGGCAAGCTTTTTGGC...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGAGGAGGAGTCTGGCTTaGCATTGGGTAGATACTGTT +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVRRSLA*HWVDTV
Trigger: AACAGTATCTACCCAATGTCAAGCCAGACTCCTCCT...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCACGTAGTCTTGATCCATaGCTGGGAGAAGCAAGGACT +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSRSLDP*LGEART
Trigger: AGTCCTTGCTTCTCCCAGTCATGGATCAAGACTACG...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAACTCAGCTCAGTGGTaGGATCCTTTCGAAGCCGAT +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLNSAQW*DPFEAD
Trigger: ATCGGCTTCGAAAGGATCTCACCACTGAGCTGAGTT...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAGGCGGTCCAGGGAGCTaGAGGCGGTGGCGTTGTATT +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKGGPGS*RRWRCI
Trigger: AATACAACGCCACCGCCTTCAGCTCCCTGGACCGCC...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATGGCCTCCATGGCACTaGTGGAGGACGGGAAGATAT +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQWPPWH*WRTGRY
Trigger: ATATCTTCCCGTCCTCCATCAGTGCCATGGAGGCCA...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGCCTACAGTTCTTAGCTaGGCACTGACACACACACAT +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVPTVLS*ALTHTH
Trigger: ATGTGTGTGTGTCAGTGCTCAGCTAAGAACTGTAGG...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCCCTACAGTTCTTAGCTaGGCACTGACACACACACAT +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFPTVLS*ALTHTH
Trigger: ATGTGTGTGTGTCAGTGCTCAGCTAAGAACTGTAGG...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCTCTGAGAGTGTCAGCTaGGAGAGTTCTGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLSESVS*ESSVSL
Trigger: GAGAGAGACAGAACTCTCTCAGCTGACACTCTCAGA...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTTGGAGGGAAGCCATaGGAGGCTGGATCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQFGGKP*EAGSVL
Trigger: GAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAA...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGTCTTTAACTAGGTTATaGTTAGACCAGCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKSLTRL*LDQPVG
Trigger: ACCCACAGGCTGGTCTAATCATAACCTAGTTAAAGA...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCGGCCAGCAGATCACTTaGGGCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFGQQIT*GQEFET
Trigger: GGTCTCGAACTCCTGGCCTCAAGTGATCTGCTGGCC...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTTGGAGTGCAGAGGCATaGTCTCGGCTTACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFWSAEA*SRLTAA
Trigger: GGCTGCAGTAAGCCGAGATCATGCCTCTGCACTCCA...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS-3UTR GCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAACCTTCCCTGCCAACTaGTGCAGGAAAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSTFPAN*CRKSSR
Trigger: TCTGCTACTTTTCCTGCAGCAGTTGGCAGGGAAGGT...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCACCCCAGCAAGCCATCTaGCTTTTTGCCAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSPQQAI*LFAKFS
Trigger: GGAGAATTTGGCAAAAAGGCAGATGGCTTGCTGGGG...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCGGATGGTGCCAGAGCTaGTCTCAATGCCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLGWCQS*SQCQKA
Trigger: AGCTTTTTGGCATTGAGAGCAGCTCTGGCACCATCC...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCACCCAGTTCTCTGAATaGACGATATGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLTQFSE*TIWTGP
Trigger: AGGCCCTGTCCATATCGTGCATTCAGAGAACTGGGT...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCCAGGAGCTTCACCTGTaGCAGTCTCTTAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFQELHL*QSLSDH
Trigger: ATGATCACTAAGAGACTGGCACAGGTGAAGCTCCTG...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAACTGCAGCTGTAGCTaGTTATCTGACCCACACTCC +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSNCSCS*LSDPHS
Trigger: GGAGTGTGGGTCAGATAAGCAGCTACAGCTGCAGTT...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACAAAGAAAGGAAACAATaGAGACGCCTTTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHKERKQ*RRLWTS
Trigger: TGAAGTCCAAAGGCGTCTGCATTGTTTCCTTTCTTT...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCAACAAGACGCTAGTATaGACTTGGCTTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGNKTLV*TWLLIN
Trigger: ATTTATCAGAAGCCAAGTGCATACTAGCGTCTTGTT...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCTTGTCACTTGCTTTATaGAAACATTCGAGTGTACCT +
Preference number: 4 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGLSLAL*KHSSVP
Trigger: AGGTACACTCGAATGTTTGCATAAAGCAAGTGACAA...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAGAGACTGAGTGTAGCTaGTCAGAACCGAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSETECS*SEPNAA
Trigger: AGCAGCATTCGGTTCTGAGCAGCTACACTCAGTCTC...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACTCCAGAGCCAAAGTTTaGAGGGAACGTGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNSRAKV*RERELG
Trigger: CCCGAGCTCACGTTCCCTCCAAACTTTGGCTCTGGA...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTTCCACTGGGTTGGGCTaGGTAGGCAGGACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANISTGLG*VGRTRG
Trigger: ACCCCGGGTCCTGCCTACCCAGCCCAACCCAGTGGA...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGCCGGGAAGCGTCCACTaGGTTGGGCTGGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQPGSVH*VGLGRQ
Trigger: CTGCCTACCCAGCCCAACCCAGTGGACGCTTCCCGG...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCAGAGCATAGTGGCTTaGGGACAAGTGCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLQSIVA*GQVQEE
Trigger: TTCTTCCTGCACTTGTCCCCAAGCCACTATGCTCTG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGGTCTTGATCCATGACTaGGAGAAGCAAGGACTGCAA +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVVLIHD*EKQGLQ
Trigger: TTGCAGTCCTTGCTTCTCCCAGTCATGGATCAAGAC...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCGTCTTGATCCATGACTaGGAGAAGCAAGGACTGCAA +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFVLIHD*EKQGLQ
Trigger: TTGCAGTCCTTGCTTCTCCCAGTCATGGATCAAGAC...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCGACATTCCGAGTGGCTaGAAAAGCTGTGACCTTGTA +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFDIPSG*KSCDLV
Trigger: TACAAGGTCACAGCTTTTCCAGCCACTCGGAATGTC...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACGATCCGCTGTACTTCTaGGGGAATGGTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNDPLYF*GNGQLP
Trigger: TGGGAGCTGACCATTCCCCCAGAAGTACAGCGGATC...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCTCTGAATGCACGATATaGACAGGGCCTTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFSECTI*TGPLAF
Trigger: GAAAGCCAAAGGCCCTGTCCATATCGTGCATTCAGA...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTGAAGCCATGAGAGGCTaGATCAGTCCTCAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFEAMRG*ISPQAS
Trigger: TGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTC...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCAACCCTAAGTTACTTTaGAGGGAAGCCATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFNPKLL*REAMRG
Trigger: GCCTCTCATGGCTTCCCTCCAAAGTAACTTAGGGTT...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACGAAAAGTATAGGCAATaGGCAACAAACAAGACGCTA +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHEKYRQ*ATNKTL
Trigger: TAGCGTCTTGTTTGTTGCCCATTGCCTATACTTTTC...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACATTATCTCTTCTCCCTaGAAATGTCTTCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHIISSP*KCLQGS
Trigger: TGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAAT...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACGTAGCAGAGACACAGTaGCCTAGCCAATCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNVAETQ*PSQSAV
Trigger: CACTGCCGATTGGCTAGGCCACTGTGTCTCTGCTAC...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACCTGGTCTGGAACTCCTaGGCTCAAGAGATCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNLVWNS*AQEILH
Trigger: GTGGAGGATCTCTTGAGCCCAGGAGTTCCAGACCAG...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAGTAATCCCGGCACTTTaGGAGGCTAAGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQVIPAL*EAKEGG
Trigger: TCCTCCCTCCTTAGCCTCCCAAAGTGCCGGGATTAC...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCCAAGGAGGCAAACTTaGCCTTCCCAACATATTGCT +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLPRRQT*PSQHIA
Trigger: AGCAATATGTTGGGAAGGTCAAGTTTGCCTCCTTGG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAACTGGGGGAGCTACCTaGCTCCACTTCCCAAAAATG +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQTGGAT*LHFPKM
Trigger: CATTTTTGGGAAGTGGAGTCAGGTAGCTCCCCCAGT...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACGTTTCCCCTTCACCTTaGCGATCCGCTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNVSPSP*RSAVLL
Trigger: CAGAAGTACAGCGGATCGTCAAGGTGAAGGGGAAAC...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGCAAAGAGGACGCTGCTaGTTAACACGTAGTCATAGT +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVQRGRC*LTRSHS
Trigger: ACTATGACTACGTGTTAATCAGCAGCGTCCTCTTTG...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCCAAAGAGGACGCTGCTaGTTAACACGTAGTCATAGT +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFQRGRC*LTRSHS
Trigger: ACTATGACTACGTGTTAATCAGCAGCGTCCTCTTTG...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCTTCTTAGCTGAGCACTaGCACACACACATACTCCAC +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLFLAEH*HTHILH
Trigger: GTGGAGTATGTGTGTGTGTCAGTGCTCAGCTAAGAA...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCGCCAACCAGCCCAAGTaGCTGGAAACTGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFANQPK*LETATV
Trigger: GACAGTGGCAGTTTCCAGGCACTTGGGCTGGTTGGC...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGAGTCTTCTTCAGGACTaGGATGTACCTTACAGACTC +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVSLLQD*DVPYRL
Trigger: GAGTCTGTAAGGTACATCGCAGTCCTGAAGAAGACT...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCACCATCTGGTAGTGGATaGTGTCACTTTCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSPSGSG*CHFLGD
Trigger: ATCTCCCAGAAAGTGACAGCATCCACTACCAGATGG...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCATCTAAGTCGAGAGACTaGAGTGGGATCTGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSSKSRD*SGICLN
Trigger: GTTGAGACAGATCCCACTGCAGTCTCTCGACTTAGA...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAATGGCTTGGGGACAAGTaGAGGAAGAACTGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKWLGDK*RKNWAR
Trigger: CCGGGCCCAGTTCTTCCTGCACTTGTCCCCAAGCCA...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTCAGCACCACCTTCCCTaGCAACTGCTGCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFQHHLP*QLLQEK
Trigger: CTTTTCCTGCAGCAGTTGGCAGGGAAGGTGGTGCTG...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCAGCCATCTGCCTTTTTaGCAAATTCTCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFSHLPF*QILLPA
Trigger: AGCTGGAAGGAGAATTTGGCAAAAAGGCAGATGGCT...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGCAATGCCAAAAAGCTTaGCTGAGGCTGTTACCATCA +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVQCQKA*LRLLPS
Trigger: TGATGGTAACAGCCTCAGGCAAGCTTTTTGGCATTG...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCCAATGCCAAAAAGCTTaGCTGAGGCTGTTACCATCA +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFQCQKA*LRLLPS
Trigger: TGATGGTAACAGCCTCAGGCAAGCTTTTTGGCATTG...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTGGATGGTGCCAGAGCTaGTCTCAATGCCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFGWCQS*SQCQKA
Trigger: AGCTTTTTGGCATTGAGAGCAGCTCTGGCACCATCC...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTAATGAACGTGCTCACTaGTGCGTTTCCCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFNERAH*CVSPSP
Trigger: AGGTGAAGGGGAAACGCAGCAGTGAGCACGTTCATT...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCTAGCCAATCGGCAGTaGTATACACACAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLLANRQ*YTHSMP
Trigger: TGGCATACTGTGTGTATAGCACTGCCGATTGGCTAG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTCTAGCCAATCGGCAGTaGTATACACACAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYILANRQ*YTHSMP
Trigger: TGGCATACTGTGTGTATAGCACTGCCGATTGGCTAG...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAGAACTGCTACTTTTCTaGACTTCATTCCGACAGGCC +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSELLLF*TSFRQA
Trigger: GGCCTGTCGGAATGAAGTGCAGAAAAGTAGCAGTTC...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGACCCATCTTCAGAACTaGTACTTTTCTGCACTTCAT +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKTHLQN*YFSALH
Trigger: ATGAAGTGCAGAAAAGTAGCAGTTCTGAAGATGGGT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACGCTTACTGCAGCCTTTaGCTCCTGGGTTCGATTCTC +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNAYCSL*LLGSIL
Trigger: GAGAATCGAACCCAGGAGGCAAAGGCTGCAGTAAGC...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS-3UTR CCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCCCGTCTTCTCCCCAGTaGTGGCAAAGCTCACTAGGG +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFPSSPQ*WQSSLG
Trigger: CCCTAGTGAGCTTTGCCACCACTGGGGAGAAGACGG...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAGTCTTGATCCATGACTaGGAGAAGCAAGGACTGCAA +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSVLIHD*EKQGLQ
Trigger: TTGCAGTCCTTGCTTCTCCCAGTCATGGATCAAGAC...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTGACATTCCGAGTGGCTaGAAAAGCTGTGACCTTGTA +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIDIPSG*KSCDLV
Trigger: TACAAGGTCACAGCTTTTCCAGCCACTCGGAATGTC...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCTCTGAATGCACGATATaGACAGGGCCTTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLSECTI*TGPLAF
Trigger: GAAAGCCAAAGGCCCTGTCCATATCGTGCATTCAGA...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGAATGTACCTATAAGGTaGAGTCGGCAAGGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVNVPIR*SRQGEF
Trigger: GAACTCTCCTTGCCGACTCCACCTTATAGGTACATT...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAGAAGCCATGAGAGGCTaGATCAGTCCTCAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQEAMRG*ISPQAS
Trigger: TGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTC...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGAAACAAAGATTTGGTaGCCCAGCCTAATAAATGAC +
Preference number: 4 (lower is better)
Translates to: LLWREAMRGWISPQASAKETKIW*PSLIND
Trigger: GTCATTTATTAGGCTGGGCCACCAAATCTTTGTTTC...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAAGAGATCCTCCACTATaGCCTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQRDPPL*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCATAGTGGAGGATCTCT...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTCAATGTTCACATGGCTaGAGGGAACAACTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFQCSHG*REQLRG
Trigger: CCCTCGGAGTTGTTCCCTTCAGCCATGTGAACATTG...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGAAAAGTAGCAGATaGTCCTCTGTCTGCACCAAA +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSRKSSR*SSVCTK
Trigger: TTTGGTGCAGACAGAGGATCATCTGCTACTTTTCCT...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAGCCAAAAAGCTTGCCTaGGGCTGTTACCATCACCAT +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQAKKLA*GCYHHH
Trigger: ATGGTGATGGTAACAGCCTCAGGCAAGCTTTTTGGC...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTTCCCAAAAATGGGATTaGAGACATACAGAGAACTCA +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFSQKWD*RHTENS
Trigger: TGAGTTCTCTGTATGTCTTCAATCCCATTTTTGGGA...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTTTCTGCACAGAGGAGTaGATGATACGCCCAGTGACG +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFFCTEE*MIRPVT
Trigger: CGTCACTGGGCGTATCATTCACTCCTCTGTGCAGAA...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTAAAAGGAGTTCTGCGTaGAGGTCATCCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFKRSSA*RSSIFP
Trigger: AGGGAAGATGGATGACCTTCACGCAGAACTCCTTTT...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTAGTCCCAGCTGCTTGTaGGGTGGAGGTTGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANISPSCL*GGGCRE
Trigger: CTCACGGCAACCTCCACCTCACAAGCAGCTGGGACT...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAGGCTGCAGTGAGCTATaGCTGTGCCACTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKGCSEL*LCHCSP
Trigger: TGGAGAGCAGTGGCACAGTCATAGCTCACTGCAGCC...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS-3UTR GCA 90 bp CTTCTGCCGTGCCCTTGTCAACATGGCGCCACAAAATATTCAAAGATGGTAAGAGTCTCCAATCAAACTTaGCCACTTGGTCTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: LLPCPCQHGATKYSKMVRVSNQT*PLGLRR
Trigger: TCTACGAAGACCAAGTGGGCAAGTTTGATTGGAGAC...TCTTACCATCTTTGAATATTTTGTGGCGCCATGTTGACAAGGGCACGGCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR GCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTTACCTTACAGACTCCTaGAGGCCAACCAGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFYLTDS*RPTSPS
Trigger: ACTTGGGCTGGTTGGCCTGCAGGAGTCTGTAAGGTA...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTTGGCTTGGGGACAAGTaGAGGAAGAACTGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIWLGDK*RKNWAR
Trigger: CCGGGCCCAGTTCTTCCTGCACTTGTCCCCAAGCCA...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACACCTTCCCTGCCAACTaGTGCAGGAAAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNTFPAN*CRKSSR
Trigger: TCTGCTACTTTTCCTGCAGCAGTTGGCAGGGAAGGT...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCACAATGCCAAAAAGCTTaGCTGAGGCTGTTACCATCA +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSQCQKA*LRLLPS
Trigger: TGATGGTAACAGCCTCAGGCAAGCTTTTTGGCATTG...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAAACTGCAGCTGTAGCTaGTTATCTGACCCACACTCC +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQNCSCS*LSDPHS
Trigger: GGAGTGTGGGTCAGATAAGCAGCTACAGCTGCAGTT...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAGCTATACACACAGTATaGCAGTTTCCCACCCCTACC +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQAIHTV*QFPTPT
Trigger: GGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGC...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACGAGACTGAGTGTAGCTaGTCAGAACCGAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNETECS*SEPNAA
Trigger: AGCAGCATTCGGTTCTGAGCAGCTACACTCAGTCTC...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGTCACATTCTTCTCTGTaGCTACAACCAACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVSHSSL*LQPTSW
Trigger: CCAAGAAGTTGGTTGTAGCCACAGAGAAGAATGTGA...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCATTGACAATGTTCACATaGCTGAAGGGAACAACTCCG +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSLTMFT*LKGTTP
Trigger: CGGAGTTGTTCCCTTCAGCCATGTGAACATTGTCAA...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCTCCAGAGCCAAAGTTTaGAGGGAACGTGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFSRAKV*RERELG
Trigger: CCCGAGCTCACGTTCCCTCCAAACTTTGGCTCTGGA...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTGTCGAGAGACTGCAGTaGGATCTGTCTCAACTCCCA +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFVERLQ*DLSQLP
Trigger: TGGGAGTTGAGACAGATCCCACTGCAGTCTCTCGAC...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAACAGAGCATAGTGGCTTaGGGACAAGTGCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQQSIVA*GQVQEE
Trigger: TTCTTCCTGCACTTGTCCCCAAGCCACTATGCTCTG...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAACCGTCTTCTCCCCAGTaGTGGCAAAGCTCACTAGGG +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKPSSPQ*WQSSLG
Trigger: CCCTAGTGAGCTTTGCCACCACTGGGGAGAAGACGG...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTATCACCATCATCTTCTaGAGGTTGAATTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFITIIF*RLNSSL
Trigger: CAGAGATGAATTCAACCTCCAGAAGATGATGGTGAT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTCAGCAGGGTGCACTGTaGGGGATGGGGGAAATGAGC +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIQQGAL*GMGEMS
Trigger: GCTCATTTCCCCCATCCCCCACAGTGCACCCTGCTG...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACTATGGACAGGGCCTTTaGCTTTCTTCTGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNYGQGL*LSSAQR
Trigger: CCTCTGTGCAGAAGAAAGCCAAAGGCCCTGTCCATA...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAGTCAAACTGCTTGGATaGGTAGACTCGAGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSVKLLG*VDSSLV
Trigger: TACCAAACTCGAGTCTACCCATCCAAGCAGTTTGAC...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GGTAGACTCGAGTTTGGTAAATGTCCAAACCATAGGCCACAACCAAACAAGTGGGTCAAACTGCTTGGATaGGTAGACTCGAGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: GRLEFGKCPNHRPQPNKWVKLLG*VDSSLV
Trigger: TACCAAACTCGAGTCTACCCATCCAAGCAGTTTGAC...CCACTTGTTTGGTTGTGGCCTATGGTTTGGACATTTACCAAACTCGAGTCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486238.1
CDS-3UTR CCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTGAACGTCAAACTGCTTaGATGGGTAGACTCGAGTTT +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIERQTA*MGRLEF
Trigger: AAACTCGAGTCTACCCATCCAAGCAGTTTGACGTTC...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GAGTTTGGTAAATGTCCAAACCATAGGCCACAACCAAACAAGTGGACTCCAGACGAACGTCAAACTGCTTaGATGGGTAGACTCGAGTTT +
Preference number: 4 (lower is better)
Translates to: EFGKCPNHRPQPNKWTPDERQTA*MGRLEF
Trigger: AAACTCGAGTCTACCCATCCAAGCAGTTTGACGTTC...GTCTGGAGTCCACTTGTTTGGTTGTGGCCTATGGTTTGGACATTTACCAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486238.1
CDS-3UTR CCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTAATGTACCTATAAGGTaGAGTCGGCAAGGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYINVPIR*SRQGEF
Trigger: GAACTCTCCTTGCCGACTCCACCTTATAGGTACATT...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR CAA 72 bp CAGAACGTCAAACTGCTTGGATGGGTAGACTCGAGTTaGGTAAATGTCCAAACCATAGGCCACAACCAAACA +
Preference number: 4 (lower is better)
Translates to: QNVKLLGWVDSS*VNVQTIGHNQT
Trigger: TGTTTGGTTGTGGCCTATGGTTTGGACATTTACCAAACTCGAGTCTACCCATCCAAGCAGTTTGACGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486238.1
CDS-3UTR TCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGCATTCCGACAGGCCATaGCTGCAGCCACCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQHSDRP*LQPPSS
Trigger: AGAAGACGGTGGCTGCAGTCATGGCCTGTCGGAATG...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTTCATCTTCTGGAGGTTaGATTCATCTCTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFSSSGG*IHLWPG
Trigger: CCCTGGCCAGAGATGAATTCAACCTCCAGAAGATGA...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAAGGAGGAGTCTGGCTTaGCATTGGGTAGATACTGTT +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQRRSLA*HWVDTV
Trigger: AACAGTATCTACCCAATGTCAAGCCAGACTCCTCCT...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCACTGGGGGAGCTACCTaGCTCCACTTCCCAAAAATG +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFTGGAT*LHFPKM
Trigger: CATTTTTGGGAAGTGGAGTCAGGTAGCTCCCCCAGT...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAATGGCCTCCATGGCACTaGTGGAGGACGGGAAGATAT +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKWPPWH*WRTGRY
Trigger: ATATCTTCCCGTCCTCCATCAGTGCCATGGAGGCCA...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCGTTCCCCTCTTACTTTaGAGCAAGAGATGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLVPLLL*SKRWKK
Trigger: CTTTTTCCATCTCTTGCTTCAAAGTAAGAGGGGAAC...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAAGCCTGTGGGTGAAATaGGAGATTATCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQSLWVK*EIISSP
Trigger: GGGAGAAGAGATAATCTCTCATTTCACCCACAGGCT...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCTCTTTAACTAGGTTATaGTTAGACCAGCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLSLTRL*LDQPVG
Trigger: ACCCACAGGCTGGTCTAATCATAACCTAGTTAAAGA...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGACCTTCCCAACATATTaGTGTCTCCAATCAAACTTG +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVTFPTY*CLQSNL
Trigger: CAAGTTTGATTGGAGACAGCAATATGTTGGGAAGGT...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAACCATCTGGTAGTGGATaGTGTCACTTTCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQPSGSG*CHFLGD
Trigger: ATCTCCCAGAAAGTGACAGCATCCACTACCAGATGG...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTCAGGCTCCAGACAGGTaGTGCAGCCACGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIQAPDR*CSHGVE
Trigger: TTCAACTCCGTGGCTGCAGCACCTGTCTGGAGCCTG...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACTCTAAGTCGAGAGACTaGAGTGGGATCTGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNSKSRD*SGICLN
Trigger: GTTGAGACAGATCCCACTGCAGTCTCTCGACTTAGA...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCACCCATCTTCAGAACTaGTACTTTTCACTTCATTCC +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFTHLQN*YFSLHS
Trigger: GGAATGAAGTGAAAAGTAGCAGTTCTGAAGATGGGT...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375199.7
CDS-3UTR GCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTAGCCATCTGCCTTTTTaGCAAATTCTCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFSHLPF*QILLPA
Trigger: AGCTGGAAGGAGAATTTGGCAAAAAGGCAGATGGCT...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTCAGAGCTGCTCTCAATaGCAAAAAGCTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFQSCSQ*QKACLR
Trigger: CCTCAGGCAAGCTTTTTGGCATTGAGAGCAGCTCTG...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTGGGAGAAGCAAGGACTaGAAGATGGGGCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIGRSKD*KMGRFS
Trigger: GCTGAAGCGCCCCATCTTGCAGTCCTTGCTTCTCCC...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGAAGGTGCGCTCATGGTaGGCGTCTGTGCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQKVRSW*ASVLSV
Trigger: GACAGAGAGCACAGACGCGCACCATGAGCGCACCTT...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTAAGGTGCGCTCATGGTaGGCGTCTGTGCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIKVRSW*ASVLSV
Trigger: GACAGAGAGCACAGACGCGCACCATGAGCGCACCTT...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTACCCAGTTCTCTGAATaGACGATATGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFTQFSE*TIWTGP
Trigger: AGGCCCTGTCCATATCGTGCATTCAGAGAACTGGGT...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTGTTGATGAATCGCTCTaGGTGTATCTGTACATCTGG +
Preference number: 4 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFVDESL*VYLYIW
Trigger: CCAGATGTACAGATACACGCAGAGCGATTCATCAAC...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTACCAATCCACCAAACTaGAGCTGTAGCTGCTTATCT +
Preference number: 4 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFTNPPN*SCSCLS
Trigger: AGATAAGCAGCTACAGCTGCAGTTTGGTGGATTGGT...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTCTCAGAACCGAATGCTaGTTTAAGATTAAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFLRTEC*FKIKES
Trigger: ACTTTCCTTAATCTTAAAGCAGCATTCGGTTCTGAG...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGCTGCTCAGAACCGAATaGTGCTTTAAGATTAAGGAA +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVLLRTE*CFKIKE
Trigger: TTCCTTAATCTTAAAGCAGCATTCGGTTCTGAGCAG...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGACCCATCTTCAGAACTaGTACTTTTCTGCACTTCAT +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVTHLQN*YFSALH
Trigger: ATGAAGTGCAGAAAAGTAGCAGTTCTGAAGATGGGT...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCTCACATTCTTCTCTGTaGCTACAACCAACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLSHSSL*LQPTSW
Trigger: CCAAGAAGTTGGTTGTAGCCACAGAGAAGAATGTGA...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAGTGCCCTTGTCAACATaGCGCCACAAGATCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKVPLST*RHKISP
Trigger: TGGGGAGATCTTGTGGCGCCATGTTGACAAGGGCAC...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAGATGCTGTCACTTTCTaGGAGATGTTCCACCCACTT +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQDAVTF*EMFHPL
Trigger: AAGTGGGTGGAACATCTCCCAGAAAGTGACAGCATC...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCGTACTTCTGGGGGAATaGTCAGCTCCCAACTCAGCT +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFVLLGE*SAPNSA
Trigger: AGCTGAGTTGGGAGCTGACCATTCCCCCAGAAGTAC...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTCCACGGCCAGCAGGTTaGGGTTCAGGCTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIPRPAG*GSGSCR
Trigger: TCTACAAGAGCCTGAACCCCAACCTGCTGGCCGTGG...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAACGTTGCGCCGAGCCTTaGTGTTCCAGTACTGGTACA +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKRCAEP*CSSTGT
Trigger: TGTACCAGTACTGGAACACCAAGGCTCGGCGCAACG...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAACCACAACCAAACAAGTaGACTCCAGACCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKPQPNK*TPDPRE
Trigger: CTCCCTCGGGTCTGGAGTCCACTTGTTTGGTTGTGG...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTGAACGTCAAACTGCTTaGATGGGTAGACTCGAGTTT +
Preference number: 4 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFERQTA*MGRLEF
Trigger: AAACTCGAGTCTACCCATCCAAGCAGTTTGACGTTC...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAACAATGCAGACGCCTTTaGACTTCAAGAGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQQCRRL*TSRESP
Trigger: TGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATTG...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAAACCCTAAGTTACTTTaGAGGGAAGCCATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQNPKLL*REAMRG
Trigger: GCCTCTCATGGCTTCCCTCCAAAGTAACTTAGGGTT...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCGAAAAGTATAGGCAATaGGCAACAAACAAGACGCTA +
Preference number: 4 (lower is better)
Translates to: MRGWISPQASAKDGSYFFEKYRQ*ATNKTL
Trigger: TAGCGTCTTGTTTGTTGCCCATTGCCTATACTTTTC...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGGAAAAGTATAGGCAATaGGCAACAAACAAGACGCTA +
Preference number: 4 (lower is better)
Translates to: NADAFGLQEKAHQESLRVEKYRQ*ATNKTL
Trigger: TAGCGTCTTGTTTGTTGCCCATTGCCTATACTTTTC...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCCGAAAAGCTCCCCATTaGCCCATCTTCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFRKAPH*PIFRTA
Trigger: AGCAGTTCTGAAGATGGGTCAATGGGGAGCTTTTCG...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAAGCCAGAGAGTCCTTTaGACTAGACTTCTCCGAAAA +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQSQRVL*TRLLRK
Trigger: TTTTCGGAGAAGTCTAGTTCAAAGGACTCTCTGGCT...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACAGCCAGAGAGTCCTTTaGACTAGACTTCTCCGAAAA +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNSQRVL*TRLLRK
Trigger: TTTTCGGAGAAGTCTAGTTCAAAGGACTCTCTGGCT...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCTGGTGTAGGTCTGATTaGAGCAAGCCAGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFWCRSD*SKPESP
Trigger: AGGACTCTCTGGCTTGCTTCAATCAGACCTACACCA...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCATCCCAAAAATGGGATTaGAGACATACAGAGAACTCA +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSSQKWD*RHTENS
Trigger: TGAGTTCTCTGTATGTCTTCAATCCCATTTTTGGGA...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAACACCACCCAGTTCTCTaGATGCACGATATGGACAGG +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKHHPVL*MHDMDR
Trigger: CCTGTCCATATCGTGCATTCAGAGAACTGGGTGGTG...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGTGGCCTCCATGGCACTaGTGGAGGACGGGAAGATAT +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQWPPWH*WRTGRY
Trigger: ATATCTTCCCGTCCTCCATCAGTGCCATGGAGGCCA...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAACAAAGAGGACGCTGCTaGTTAACACGTAGTCATAGT +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQQRGRC*LTRSHS
Trigger: ACTATGACTACGTGTTAATCAGCAGCGTCCTCTTTG...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAACCCATCAGGAATCTCTaGGAGTGTCAGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKPIRNL*ECQLRE
Trigger: CTCTCTCAGCTGACACTCTCAGAGATTCCTGATGGG...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTGTTCCCCTCTTACTTTaGAGCAAGAGATGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFVPLLL*SKRWKK
Trigger: CTTTTTCCATCTCTTGCTTCAAAGTAAGAGGGGAAC...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAAGACCAGCCTGTGGGTaGAATGAGAGATTATCTCTT +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQRPACG*NERLSL
Trigger: AAGAGATAATCTCTCATTTCACCCACAGGCTGGTCT...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTAAAAAGCACCTGCTTTaGGGTAACTTTGATTACAGC +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIKKHLL*GNFDYS
Trigger: GCTGTAATCAAAGTTACCTCAAAGCAGGTGCTTTTT...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAAGTCTTCTTCAGGACTaGGATGTACCTTACAGACTC +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQSLLQD*DVPYRL
Trigger: GAGTCTGTAAGGTACATCGCAGTCCTGAAGAAGACT...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCGGATGGTGCCAGAGCTaGTCTCAATGCCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFGWCQS*SQCQKA
Trigger: AGCTTTTTGGCATTGAGAGCAGCTCTGGCACCATCC...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTCAGGAGCTTCACCTGTaGCAGTCTCTTAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFQELHL*QSLSDH
Trigger: ATGATCACTAAGAGACTGGCACAGGTGAAGCTCCTG...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAAAGAAAGGAAACAATaGAGACGCCTTTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLKERKQ*RRLWTS
Trigger: TGAAGTCCAAAGGCGTCTGCATTGTTTCCTTTCTTT...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAAAGAAAGGAAACAATaGAGACGCCTTTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSKERKQ*RRLWTS
Trigger: TGAAGTCCAAAGGCGTCTGCATTGTTTCCTTTCTTT...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCTGCTCAGAACCGAATaGTGCTTTAAGATTAAGGAA +
Preference number: 4 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLLLRTE*CFKIKE
Trigger: TTCCTTAATCTTAAAGCAGCATTCGGTTCTGAGCAG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAGTCGAGAGACTGCAGTaGGATCTGTCTCAACTCCCA +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKVERLQ*DLSQLP
Trigger: TGGGAGTTGAGACAGATCCCACTGCAGTCTCTCGAC...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGTCTTCTCCCCAGTGGTaGCAAAGCTCACTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQSSPQW*QSSLGQ
Trigger: CTGCCCTAGTGAGCTTTGCCACCACTGGGGAGAAGA...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTGACATTCCGAGTGGCTaGAAAAGCTGTGACCTTGTA +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFDIPSG*KSCDLV
Trigger: TACAAGGTCACAGCTTTTCCAGCCACTCGGAATGTC...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAATAAAGGTGCGCTCATaGTGCGCGTCTGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKIKVRS*CASVLS
Trigger: AGAGAGCACAGACGCGCACCATGAGCGCACCTTTAT...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAAATGTACCTATAAGGTaGAGTCGGCAAGGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQNVPIR*SRQGEF
Trigger: GAACTCTCCTTGCCGACTCCACCTTATAGGTACATT...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGGTAGCAGAGACACAGTaGCCTAGCCAATCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQVAETQ*PSQSAV
Trigger: CACTGCCGATTGGCTAGGCCACTGTGTCTCTGCTAC...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGCTCCATTGGACACAGTaGTCACATCCTGTCCGTGCA +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQLHWTQ*SHPVRA
Trigger: TGCACGGACAGGATGTGATCACTGTGTCCAATGGAG...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCGAAACCCTAACCTGCTaGACAATCTCTCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFETLTC*TISPSS
Trigger: GGAAGATGGAGAGATTGTTCAGCAGGTTAGGGTTTC...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAATCTCATTCTTAATCTaGCTCCGGGGCTTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKISFLI*LRGFRA
Trigger: TGCTCGGAAGCCCCGGAGTCAGATTAAGAATGAGAT...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGCACCACCCAGTTCTCTaGATGCACGATATGGACAGG +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQHHPVL*MHDMDR
Trigger: CCTGTCCATATCGTGCATTCAGAGAACTGGGTGGTG...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCGCCCAGCCTAATAAATaGCAGCACGAAACTAGAGGT +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFAQPNK*QHETRG
Trigger: ACCTCTAGTTTCGTGCTGTCATTTATTAGGCTGGGC...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTATCACATCCTGTCCGTaGAGCAGCATGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIITSCP*SSMAST
Trigger: TGTGGATGCCATGCTGCTGCACGGACAGGATGTGAT...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAACCCCAGCAAGCCATCTaGCTTTTTGCCAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKPQQAI*LFAKFS
Trigger: GGAGAATTTGGCAAAAAGGCAGATGGCTTGCTGGGG...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGGAGGTGGGAAGTCCATaGTTGCAGCAGGATAAGCTG +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQEVGSP*LQQDKL
Trigger: CAGCTTATCCTGCTGCAAGCATGGACTTCCCACCTC...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAACAGAGCTGCTCTCAATaGCAAAAAGCTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKQSCSQ*QKACLR
Trigger: CCTCAGGCAAGCTTTTTGGCATTGAGAGCAGCTCTG...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTTGTCACTTGCTTTATaGAAACATTCGAGTGTACCT +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYILSLAL*KHSSVP
Trigger: AGGTACACTCGAATGTTTGCATAAAGCAAGTGACAA...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACTCACATTCTTCTCTGTaGCTACAACCAACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNSHSSL*LQPTSW
Trigger: CCAAGAAGTTGGTTGTAGCCACAGAGAAGAATGTGA...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTGAAACAAAGATTTGGTaGCCCAGCCTAATAAATGAC +
Preference number: 4 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFETKIW*PSLIND
Trigger: GTCATTTATTAGGCTGGGCCACCAAATCTTTGTTTC...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTCAGGAAATGAGTCTTaGGATGATTCTGATGATACT +
Preference number: 4 (lower is better)
Translates to: RVYLFHHRARDGLLCTYISGNES*DDSDDT
Trigger: AGTATCATCAGAATCATCCCAAGACTCATTTCCTGA...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS-3UTR TCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAGAAACCCTAACCTGCTaGACAATCTCTCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKETLTC*TISPSS
Trigger: GGAAGATGGAGAGATTGTTCAGCAGGTTAGGGTTTC...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCAGGAAAAGTAGCAGATaGTCCTCTGTCTGCACCAAA +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFRKSSR*SSVCTK
Trigger: TTTGGTGCAGACAGAGGATCATCTGCTACTTTTCCT...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCGTCTCCAATCAAACTTaGCCACTTGGTCTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFVSNQT*PLGLRR
Trigger: TCTACGAAGACCAAGTGGGCAAGTTTGATTGGAGAC...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGCAGAGCTGCTCTCAATaGCAAAAAGCTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQQSCSQ*QKACLR
Trigger: CCTCAGGCAAGCTTTTTGGCATTGAGAGCAGCTCTG...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGACCCAGTTCTCTGAATaGACGATATGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQTQFSE*TIWTGP
Trigger: AGGCCCTGTCCATATCGTGCATTCAGAGAACTGGGT...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCACCAATCCACCAAACTaGAGCTGTAGCTGCTTATCT +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFTNPPN*SCSCLS
Trigger: AGATAAGCAGCTACAGCTGCAGTTTGGTGGATTGGT...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTCCAAGGAGGCAAACTTaGCCTTCCCAACATATTGCT +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIPRRQT*PSQHIA
Trigger: AGCAATATGTTGGGAAGGTCAAGTTTGCCTCCTTGG...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAAGCCAGAGAGTCCTTTaGACTAGACTTCTCCGAAAA +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKSQRVL*TRLLRK
Trigger: TTTTCGGAGAAGTCTAGTTCAAAGGACTCTCTGGCT...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTAGGAGGAGTCTGGCTTaGCATTGGGTAGATACTGTT +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIRRSLA*HWVDTV
Trigger: AACAGTATCTACCCAATGTCAAGCCAGACTCCTCCT...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGAGCCTGTGGGTGAAATaGGAGATTATCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQSLWVK*EIISSP
Trigger: GGGAGAAGAGATAATCTCTCATTTCACCCACAGGCT...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAAGTCTTCTTCAGGACTaGGATGTACCTTACAGACTC +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKSLLQD*DVPYRL
Trigger: GAGTCTGTAAGGTACATCGCAGTCCTGAAGAAGACT...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGCCATCTGGTAGTGGATaGTGTCACTTTCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQPSGSG*CHFLGD
Trigger: ATCTCCCAGAAAGTGACAGCATCCACTACCAGATGG...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGTCTAAGTCGAGAGACTaGAGTGGGATCTGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQSKSRD*SGICLN
Trigger: GTTGAGACAGATCCCACTGCAGTCTCTCGACTTAGA...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAAGCCATCTGCCTTTTTaGCAAATTCTCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKSHLPF*QILLPA
Trigger: AGCTGGAAGGAGAATTTGGCAAAAAGGCAGATGGCT...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTATCACCATCATCTTCTaGAGGTTGAATTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFITIIF*RLNSSL
Trigger: CAGAGATGAATTCAACCTCCAGAAGATGATGGTGAT...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAGAACGTCAAACTGCTTaGATGGGTAGACTCGAGTTT +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKERQTA*MGRLEF
Trigger: AAACTCGAGTCTACCCATCCAAGCAGTTTGACGTTC...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTCAATGCAGACGCCTTTaGACTTCAAGAGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIQCRRL*TSRESP
Trigger: TGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATTG...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTGAAACAAAGATTTGGTaGCCCAGCCTAATAAATGAC +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFETKIW*PSLIND
Trigger: GTCATTTATTAGGCTGGGCCACCAAATCTTTGTTTC...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCAAGTATGACAATTTATaGGCCAGGTGCAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFKYDNL*ARCSSS
Trigger: TGAGCTACTGCACCTGGCCCATAAATTGTCATACTT...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS-3UTR TCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTAGGAAAAGTAGCAGATaGTCCTCTGTCTGCACCAAA +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIRKSSR*SSVCTK
Trigger: TTTGGTGCAGACAGAGGATCATCTGCTACTTTTCCT...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR TCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGAGACCAGCCTGTGGGTaGAATGAGAGATTATCTCTT +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQRPACG*NERLSL
Trigger: AAGAGATAATCTCTCATTTCACCCACAGGCTGGTCT...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR TCA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCAAAAAGCACCTGCTTTaGGGTAACTTTGATTACAGC +
Preference number: 4 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFKKHLL*GNFDYS
Trigger: GCTGTAATCAAAGTTACCTCAAAGCAGGTGCTTTTT...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGGTCTCCAATCAAACTTaGCCACTTGGTCTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQVSNQT*PLGLRR
Trigger: TCTACGAAGACCAAGTGGGCAAGTTTGATTGGAGAC...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGGTTGATGAATCGCTCTaGGTGTATCTGTACATCTGG +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQVDESL*VYLYIW
Trigger: CCAGATGTACAGATACACGCAGAGCGATTCATCAAC...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGTCCCAAAAGGAGTTCTaGGTGAAGGTCATCCATCTT +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQSQKEF*VKVIHL
Trigger: AAGATGGATGACCTTCACGCAGAACTCCTTTTGGGA...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAATTCCTCTTCCTTCTCTaGCATAATCTACCATCAGCA +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKFLFLL*HNLPSA
Trigger: TGCTGATGGTAGATTATGGCAGAGAAGGAAGAGGAA...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTGTCAAACTGCTTGGATaGGTAGACTCGAGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIVKLLG*VDSSLV
Trigger: TACCAAACTCGAGTCTACCCATCCAAGCAGTTTGAC...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR CAA 72 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTaGCTTTATGCAAACATTCGAGTGTACCTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICH*LYANIRVYLFH
Trigger: GTGAAAGAGGTACACTCGAATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTTTTCAAATTGAAAGATaGCTTACGGAGCACATAACA +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFFQIER*LTEHIT
Trigger: TGTTATGTGCTCCGTAAGGCATCTTTCAATTTGAAA...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS-3UTR CCA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTATTGAAACAAAGATTTaGTGGCCCAGCCTAATAAAT +
Preference number: 4 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFIETKI*WPSLIN
Trigger: ATTTATTAGGCTGGGCCACCAAATCTTTGTTTCAAT...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAATTATCTCTTCTCCCTaGAAATGTCTTCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKIISSP*KCLQGS
Trigger: TGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAAT...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGTTACGTGAAACACCATaGGGCCCCAAAATTAACCTA +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQLRETP*GPKINL
Trigger: TAGGTTAATTTTGGGGCCCCATGGTGTTTCACGTAA...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
3UTR CAA 72 bp CTTCTAAGACACAAAAGAGGACTTAAACAGTGTCATTaGTCACTTGCTTTATGCAAACATTCGAGTGTACCT +
Preference number: 4 (lower is better)
Translates to: LLRHKRGLKQCH*SLALCKHSSVP
Trigger: AGGTACACTCGAATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTCTTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR GCA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAACTCAGAACCGAATGCTaGTTTAAGATTAAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKLRTEC*FKIKES
Trigger: ACTTTCCTTAATCTTAAAGCAGCATTCGGTTCTGAG...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGATCACCATCATCTTCTaGAGGTTGAATTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQITIIF*RLNSSL
Trigger: CAGAGATGAATTCAACCTCCAGAAGATGATGGTGAT...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGATTATCTCTTCTCCCTaGAAATGTCTTCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQIISSP*KCLQGS
Trigger: TGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAAT...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR GCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTAACAAGACGCTAGTATaGACTTGGCTTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANINKTLV*TWLLIN
Trigger: ATTTATCAGAAGCCAAGTGCATACTAGCGTCTTGTT...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CCA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTATTGAAACAAAGATTTaGTGGCCCAGCCTAATAAAT +
Preference number: 4 (lower is better)
Translates to: DTKEDLNSVICHLLYANIIETKI*WPSLIN
Trigger: ATTTATTAGGCTGGGCCACCAAATCTTTGTTTCAAT...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS CCA 90 bp GCTTGGGGACAAGTGCAGGAAGAACTGGGCCCGGGAAGCGTCCACTaGGTTGGGCTGGGTAGGCAGGACCCGGGGTTGGAATCCACTTCC +
Preference number: 5 (lower is better)
Translates to: AWGQVQEELGPGSVH*VGLGRQDPGLESTS
Trigger: GGAAGTGGATTCCAACCCCGGGTCCTGCCTACCCAGCCCAACCCAGTGGACGCTTCCCGGGCCCAGTTCTTCCTGCACTTGTCCCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000467423.2
ENST00000477853.6
CDS GCA 90 bp GATCACATCCTGTCCGTGCAGCAGCATGGCATCCACAGCCCCTTCTaGCGTGCCCTTGTCAACATGGCGCCACAAGATCTCCCCAGTTCG +
Preference number: 5 (lower is better)
Translates to: DHILSVQQHGIHSPF*RALVNMAPQDLPSS
Trigger: CGAACTGGGGAGATCTTGTGGCGCCATGTTGACAAGGGCACGGCAGAAGGGGCTGTGGATGCCATGCTGCTGCACGGACAGGATGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS CCA 90 bp GAGCCTTCAGCACTGCCCATGAGGGTCTCACCTGCTTTGTTCTGTTaGGATCTCGGGGCGGCGGGGATCCAGCAAAGCCTTAGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: EPSALPMRVSPALFC*DLGAAGIQQSLRKG
Trigger: TCCCTTCCTAAGGCTTTGCTGGATCCCCGCCGCCCCGAGATCCCAACAGAACAAAGCAGGTGAGACCCTCATGGGCAGTGCTGAAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461353.1
CDS GCA 90 bp CCCCAGCAGGAAGTCTCCTTCCCATTGAGCAAACGCAGCTGTTCATaGAGCTGCGGTACAGTGGCCAGGGAAGACTGGAGGACCAGGCAT +
Preference number: 5 (lower is better)
Translates to: PQQEVSFPLSKRSCS*SCGTVAREDWRTRH
Trigger: ATGCCTGGTCCTCCAGTCTTCCCTGGCCACTGTACCGCAGCTGCATGAACAGCTGCGTTTGCTCAATGGGAAGGAGACTTCCTGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480380.1
CDS CCA 90 bp CGGGAAGCGTCCACTGGGTTGGGCTGGGTAGGCAGGACCCGGGGTTaGAATCCACTTCCAAATTCTAAGTCGAGAGACTGCAGTGGGATC +
Preference number: 5 (lower is better)
Translates to: REASTGLGWVGRTRG*NPLPNSKSRDCSGI
Trigger: GATCCCACTGCAGTCTCTCGACTTAGAATTTGGAAGTGGATTCCAACCCCGGGTCCTGCCTACCCAGCCCAACCCAGTGGACGCTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000467423.2
ENST00000477853.6
CDS CCA 90 bp AAGTGCAGGAAGAACTGGGCCCGGGAAGCGTCCACTGGGTTGGGCTaGGTAGGCAGGACCCGGGGTTGGAATCCACTTCCAAATTCTAAG +
Preference number: 5 (lower is better)
Translates to: KCRKNWAREASTGLG*VGRTRGWNPLPNSK
Trigger: CTTAGAATTTGGAAGTGGATTCCAACCCCGGGTCCTGCCTACCCAGCCCAACCCAGTGGACGCTTCCCGGGCCCAGTTCTTCCTGCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000467423.2
ENST00000477853.6
CDS CCA 90 bp CCAGTGACGCCATCAATGAGGAAGATGCCAATAAAGGTGCGCTCATaGTGCGCGTCTGTGCTCTCTGTCACCACGGCCAGCAGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PVTPSMRKMPIKVRS*CASVLSVTTASRLG
Trigger: CCCCAACCTGCTGGCCGTGGTGACAGAGAGCACAGACGCGCACCATGAGCGCACCTTTATTGGCATCTTCCTCATTGATGGCGTCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000494770.6
CDS TCA 90 bp TCTCAACTCCCATTCCGTCTCCAGAGCCAAAGTTTGGAGGGAACGTaGGCTCGGGTCAGGACACACCAGGACAGCCTCATCCACCACACC +
Preference number: 5 (lower is better)
Translates to: SQLPFRLQSQSLEGT*ARVRTHQDSLIHHT
Trigger: GGTGTGGTGGATGAGGCTGTCCTGGTGTGTCCTGACCCGAGCTCACGTTCCCTCCAAACTTTGGCTCTGGAGACGGAATGGGAGTTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000467423.2
ENST00000477853.6
CDS TCA 90 bp GGCCCTGGGAATGAACGTGCTCACTGCTGCGTTTCCCCTTCACCTTaGCGATCCGCTGTACTTCTGGGGGAATGGTCAGCTCCCAACTCA +
Preference number: 5 (lower is better)
Translates to: GPGNERAHCCVSPSP*RSAVLLGEWSAPNS
Trigger: TGAGTTGGGAGCTGACCATTCCCCCAGAAGTACAGCGGATCGTCAAGGTGAAGGGGAAACGCAGCAGTGAGCACGTTCATTCCCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000494770.6
CDS GCA 90 bp GTGACGCCATCAATGAGGAAGATGCCAATAAAGGTGCGCTCATGGTaGGCGTCTGTGCTCTCTGTCACCACGGCCAGCAGGTTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: VTPSMRKMPIKVRSW*ASVLSVTTASRLGF
Trigger: GAACCCCAACCTGCTGGCCGTGGTGACAGAGAGCACAGACGCGCACCATGAGCGCACCTTTATTGGCATCTTCCTCATTGATGGCGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000494770.6
CDS GCA 90 bp TTCTCCTCTCTGCAAAACACCAGCCGGGACAGGCAGTCTGAGCACTaGTGTAAAGGGATCTCTTGGCTGCCCTTCCTGAGTCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: FSSLQNTSRDRQSEH*CKGISWLPFLSPGR
Trigger: CCTCCCAGGACTCAGGAAGGGCAGCCAAGAGATCCCTTTACAGCAGTGCTCAGACTGCCTGTCCCGGCTGGTGTTTTGCAGAGAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461353.1
CDS-3UTR CAA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACCTCTGCTTTGTTCTGTaGGGATCTCGGGGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHLCFVL*GSRGGG
Trigger: CCCGCCGCCCCGAGATCCCAACAGAACAAAGCAGAG...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CAGTTCAGGCCCCCGATGTTAGTCTCCCAGGAACGCATGATTCGGCCTCCATTGCCTTCTGCCGTGCCCTaGTCAACATGGCGCCACAAA +
Preference number: 5 (lower is better)
Translates to: QFRPPMLVSQERMIRPPLPSAVP*STWRHK
Trigger: TTTGTGGCGCCATGTTGACAAGGGCACGGCAGAAGG...CAATGGAGGCCGAATCATGCGTTCCTGGGAGACTAACATCGGGGGCCTGAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS GCA 90 bp CCCACTGGAGAGGTGATGGAGGGCAAGTGTAGTCTTCTTCAGGACTaGGATGTACCTTACAGACTCCTGCAGGCCAACCAGCCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: PTGEVMEGKCSLLQD*DVPYRLLQANQPKC
Trigger: GCACTTGGGCTGGTTGGCCTGCAGGAGTCTGTAAGGTACATCGCAGTCCTGAAGAAGACTACACTTGCCCTCCATCACCTCTCCAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS GCA 90 bp TTATGTAAGGTCAGAGCCTTCAGCACTGCCCATGAGGGTCTCACCTaGTTTGTTCTGTTGGGATCTCGGGGCGGCGGGGATCCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LCKVRAFSTAHEGLT*FVLLGSRGGGDPAK
Trigger: CTTTGCTGGATCCCCGCCGCCCCGAGATCCCAACAGAACAAAGCAGGTGAGACCCTCATGGGCAGTGCTGAAGGCTCTGACCTTACATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461353.1
CDS CCA 90 bp CAAACTCAGCGTTCCATAATGGTACTGCAGCAGAGCATAGTGGCTTaGGGACAAGTGCAGGAAGAACTGGGCCCGGGAAGCGTCCACTGG +
Preference number: 5 (lower is better)
Translates to: QTQRSIMVLQQSIVA*GQVQEELGPGSVHW
Trigger: CCAGTGGACGCTTCCCGGGCCCAGTTCTTCCTGCACTTGTCCCCAAGCCACTATGCTCTGCTGCAGTACCATTATGGAACGCTGAGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000467423.2
ENST00000477853.6
CDS CCA 90 bp ACCAGCCGGGACAGGCAGTCTGAGCACTGCTGTAAAGGGATCTCTTaGCTGCCCTTCCTGAGTCCTGGGAGGTTTCCAGGCTACATATCT +
Preference number: 5 (lower is better)
Translates to: TSRDRQSEHCCKGIS*LPFLSPGRFPGYIS
Trigger: AGATATGTAGCCTGGAAACCTCCCAGGACTCAGGAAGGGCAGCCAAGAGATCCCTTTACAGCAGTGCTCAGACTGCCTGTCCCGGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461353.1
CDS-3UTR CAA 90 bp AGTGGACTCCAGACCCGAGGGAGCTGTGTAGATACCTCGCATTCGAGAAACTGTATCTGCTTTGTTCTGTaGGGATCTCGGGGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: SGLQTRGSCVDTSHSRNCICFVL*GSRGGG
Trigger: CCCGCCGCCCCGAGATCCCAACAGAACAAAGCAGAT...ACAGTTTCTCGAATGCGAGGTATCTACACAGCTCCCTCGGGTCTGGAGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486238.1
CDS GCA 90 bp CACACCAGGACAGCCTCATCCACCACACCACAGGCTCCAGACAGGTaGTGCAGCCACGGAGTTGAAACCCTAACCTACAGAAAAGTCATC +
Preference number: 5 (lower is better)
Translates to: HTRTASSTTPQAPDR*CSHGVETLTYRKVI
Trigger: GATGACTTTTCTGTAGGTTAGGGTTTCAACTCCGTGGCTGCAGCACCTGTCTGGAGCCTGTGGTGTGGTGGATGAGGCTGTCCTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467423.2
CDS GCA 90 bp CAGGAAGTCTCCTTCCCATTGAGCAAACGCAGCTGTTCATGCAGCTaGGGTACAGTGGCCAGGGAAGACTGGAGGACCAGGCATGATCAA +
Preference number: 5 (lower is better)
Translates to: QEVSFPLSKRSCSCS*GTVAREDWRTRHDQ
Trigger: TTGATCATGCCTGGTCCTCCAGTCTTCCCTGGCCACTGTACCGCAGCTGCATGAACAGCTGCGTTTGCTCAATGGGAAGGAGACTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480380.1
CDS CCA 90 bp CTCACTGCTGCGTTTCCCCTTCACCTTGACGATCCGCTGTACTTCTaGGGGAATGGTCAGCTCCCAACTCAGCTCAGTGGTGAGATCCTT +
Preference number: 5 (lower is better)
Translates to: LTAAFPLHLDDPLYF*GNGQLPTQLSGEIL
Trigger: AAGGATCTCACCACTGAGCTGAGTTGGGAGCTGACCATTCCCCCAGAAGTACAGCGGATCGTCAAGGTGAAGGGGAAACGCAGCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACCTGAAGGCGGTGGCGTaGTATTGCTCAGTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHLKAVA*YCSVPS
Trigger: TGAGGGCACTGAGCAATACAACGCCACCGCCTTCAG...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS TCA 90 bp TCCTTGTCCTTCACCAGCAGGGTGCACTGTGGGGGATGGGGGAAATaGGCAGTAGTTCTCTGGACCATCAGTTTAAAGGAGGAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: SLSFTSRVHCGGWGK*AVVLWTISLKEESG
Trigger: GCCAGACTCCTCCTTTAAACTGATGGTCCAGAGAACTACTGCTCATTTCCCCCATCCCCCACAGTGCACCCTGCTGGTGAAGGACAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS GCA 90 bp ACCAGGACAGCCTCATCCACCACACCACAGGCTCCAGACAGGTGCTaGAGCCACGGAGTTGAAACCCTAACCTACAGAAAAGTCATCGTT +
Preference number: 5 (lower is better)
Translates to: TRTASSTTPQAPDRC*SHGVETLTYRKVIV
Trigger: AACGATGACTTTTCTGTAGGTTAGGGTTTCAACTCCGTGGCTGCAGCACCTGTCTGGAGCCTGTGGTGTGGTGGATGAGGCTGTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467423.2
CDS-3UTR CAA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCCCGAAAAGCTCCCCATaGACCCATCTTCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGPKSSP*THLQNC
Trigger: GCAGTTCTGAAGATGGGTCAATGGGGAGCTTTTCGG...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGGCGGTGGCGTTGTATaGCTCAGTGCCCTCATAGAG +
Preference number: 5 (lower is better)
Translates to: LLWREAMRGWISPQASAKGGGVV*LSALIE
Trigger: CTCTATGAGGGCACTGAGCAATACAACGCCACCGCC...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS TCA 90 bp AACATTTTCCAGAGGTGGGAAGTCCATGCTTGCAGCAGGATAAGCTaGGACGAGAGGCGTTTCAGGAACATCCCCAGCAAGCCATCTGCC +
Preference number: 5 (lower is better)
Translates to: NIFQRWEVHACSRIS*DERRFRNIPSKPSA
Trigger: GGCAGATGGCTTGCTGGGGATGTTCCTGAAACGCCTCTCGTCTCAGCTTATCCTGCTGCAAGCATGGACTTCCCACCTCTGGAAAATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS TCA 90 bp GGCAGTCTGAGCACTGCTGTAAAGGGATCTCTTGGCTGCCCTTCCTaGGTCCTGGGAGGTTTCCAGGCTACATATCTAGCCTCAAATCTC +
Preference number: 5 (lower is better)
Translates to: GSLSTAVKGSLGCPS*VLGGFQATYLASNL
Trigger: GAGATTTGAGGCTAGATATGTAGCCTGGAAACCTCCCAGGACTCAGGAAGGGCAGCCAAGAGATCCCTTTACAGCAGTGCTCAGACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461353.1
CDS CCA 90 bp AGAACTCATTCCCGACTCCTTGTCCTTCACCAGCAGGGTGCACTGTaGGGGATGGGGGAAATGAGCAGTAGTTCTCTGGACCATCAGTTT +
Preference number: 5 (lower is better)
Translates to: RTHSRLLVLHQQGAL*GMGEMSSSSLDHQF
Trigger: AAACTGATGGTCCAGAGAACTACTGCTCATTTCCCCCATCCCCCACAGTGCACCCTGCTGGTGAAGGACAAGGAGTCGGGAATGAGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS CCA 90 bp ATCATCTATCAACAGCAACACCTTGGCGTAGTCTTGATCCATGACTaGGAGAAGCAAGGACTGCAAGATGGGGCGCTTCAGCACTGGGGG +
Preference number: 5 (lower is better)
Translates to: IIYQQQHLGVVLIHD*EKQGLQDGALQHWG
Trigger: CCCCCAGTGCTGAAGCGCCCCATCTTGCAGTCCTTGCTTCTCCCAGTCATGGATCAAGACTACGCCAAGGTGTTGCTGTTGATAGATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS CCA 90 bp ATCCACACAGCCGTCCCTGCTCTGCATCCACCAAATAGAAGAAGATaGAAGGGGCAAGCTCATGTAGCTGTCGCAAGACATTCCGAGTGG +
Preference number: 5 (lower is better)
Translates to: IHTAVPALHPPNRRR*KGQAHVAVARHSEW
Trigger: CCACTCGGAATGTCTTGCGACAGCTACATGAGCTTGCCCCTTCCATCTTCTTCTATTTGGTGGATGCAGAGCAGGGACGGCTGTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGATCAAACTTGCCCACTaGGTCTTCGTAGACCGCGGC +
Preference number: 5 (lower is better)
Translates to: LLWREAMRGWISPQASAKIKLAH*VFVDRG
Trigger: GCCGCGGTCTACGAAGACCAAGTGGGCAAGTTTGAT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGCCTTCTGCCGTGCCCTaGTCAACATGGCGCCACAAG +
Preference number: 5 (lower is better)
Translates to: NADAFGLQEKAHQESLRVPSAVP*STWRHK
Trigger: CTTGTGGCGCCATGTTGACAAGGGCACGGCAGAAGG...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACCCGAAAAGCTCCCCATaGACCCATCTTCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHPKSSP*THLQNC
Trigger: GCAGTTCTGAAGATGGGTCAATGGGGAGCTTTTCGG...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCATATGGACAGGGCCTTaGGCTTTCTTCTGCACAGAG +
Preference number: 5 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGIWTGP*AFFCTE
Trigger: CTCTGTGCAGAAGAAAGCCAAAGGCCCTGTCCATAT...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCTCTGCTTTGTTCTGTaGGGATCTCGGGGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLLCFVL*GSRGGG
Trigger: CCCGCCGCCCCGAGATCCCAACAGAACAAAGCAGAG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTAGGCCAGCAGATCACTaGAGGCCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFRPADH*RPGVRD
Trigger: GTCTCGAACTCCTGGCCTCAAGTGATCTGCTGGCCT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTATCAAACTTGCCCACTaGGTCTTCGTAGACCGCGGC +
Preference number: 5 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFIKLAH*VFVDRG
Trigger: GCCGCGGTCTACGAAGACCAAGTGGGCAAGTTTGAT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCCTCATTCCCGACTCCTaGTCCTTCACCAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: MRGWISPQASAKDGSYFFLIPDS*SFTSRV
Trigger: CACCCTGCTGGTGAAGGACAAGGAGTCGGGAATGAG...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGCTCATTCCCGACTCCTaGTCCTTCACCAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: NADAFGLQEKAHQESLRVLIPDS*SFTSRV
Trigger: CACCCTGCTGGTGAAGGACAAGGAGTCGGGAATGAG...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCTCGTTGCGCCGAGCCTaGGTGTTCCAGTACTGGTAC +
Preference number: 5 (lower is better)
Translates to: MRGWISPQASAKDGSYFFSLRRA*VFQYWY
Trigger: GTACCAGTACTGGAACACCAAGGCTCGGCGCAACGA...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGTCGTTGCGCCGAGCCTaGGTGTTCCAGTACTGGTAC +
Preference number: 5 (lower is better)
Translates to: NADAFGLQEKAHQESLRVSLRRA*VFQYWY
Trigger: GTACCAGTACTGGAACACCAAGGCTCGGCGCAACGA...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGCTGAAGGCGGTGGCGTaGTATTGCTCAGTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: NADAFGLQEKAHQESLRVLKAVA*YCSVPS
Trigger: TGAGGGCACTGAGCAATACAACGCCACCGCCTTCAG...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TCCCAGGAACGCATGATTCGGCCTCCATTGGACACAGTGATCACATCCTGTCCGATCAGCCAGGCAGAGTaGGCAATGGTAAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: SQERMIRPPLDTVITSCPISQAE*AMVSLS
Trigger: TGAAAGACTTACCATTGCCAACTCTGCCTGGCTGAT...CGGACAGGATGTGATCACTGTGTCCAATGGAGGCCGAATCATGCGTTCCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR CAA 90 bp CCTTATTCAGGAATCAGCCAGGCAGAGTTGGCAATGGTAAGTCTTTCATCCCTGATCAAACTTGCCCACTaGGTCTTCGTAGACCGCGGC +
Preference number: 5 (lower is better)
Translates to: PYSGISQAELAMVSLSSLIKLAH*VFVDRG
Trigger: GCCGCGGTCTACGAAGACCAAGTGGGCAAGTTTGAT...CAGGGATGAAAGACTTACCATTGCCAACTCTGCCTGGCTGATTCCTGAATAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR CAA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACTCCAAGGAGGCAAACTaGACCTTCCCAACATATTGC +
Preference number: 5 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHSKEAN*TFPTYC
Trigger: GCAATATGTTGGGAAGGTCAAGTTTGCCTCCTTGGA...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGATGATTCGGCCTCCATaGGACACAGTGATCACATCC +
Preference number: 5 (lower is better)
Translates to: LLWREAMRGWISPQASAKMIRPP*DTVITS
Trigger: GGATGTGATCACTGTGTCCAATGGAGGCCGAATCAT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTCCGAAAAGCTCCCCATaGACCCATCTTCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFPKSSP*THLQNC
Trigger: GCAGTTCTGAAGATGGGTCAATGGGGAGCTTTTCGG...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACATCATCTTCTGGAGGTaGAATTCATCTCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHIIFWR*NSSLAR
Trigger: CCTGGCCAGAGATGAATTCAACCTCCAGAAGATGAT...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACTCAATGCCAAAAAGCTaGCCTGAGGCTGTTACCATC +
Preference number: 5 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHSMPKS*PEAVTI
Trigger: GATGGTAACAGCCTCAGGCAAGCTTTTTGGCATTGA...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTCTCATTCCCGACTCCTaGTCCTTCACCAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: RVYLFHHRARDGLLCTYILIPDS*SFTSRV
Trigger: CACCCTGCTGGTGAAGGACAAGGAGTCGGGAATGAG...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGAGTACGGTAAACTCGTaGCGCCGAGCCTTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: NADAFGLQEKAHQESLRVSTVNS*RRALVF
Trigger: GAACACCAAGGCTCGGCGCAACGAGTTTACCGTACT...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAGGCGGTGGCGTTGTATaGCTCAGTGCCCTCATAGAG +
Preference number: 5 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSGGGVV*LSALIE
Trigger: CTCTATGAGGGCACTGAGCAATACAACGCCACCGCC...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGTTCCCTCCCAGTAGCTaGTTTCAGATTCTGGCACAC +
Preference number: 5 (lower is better)
Translates to: LLWREAMRGWISPQASAKFPPSS*FQILAH
Trigger: GTGTGCCAGAATCTGAAACAAGCTACTGGGAGGGAA...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS TCA 90 bp TGCACGATATGGACAGGGCCTTTGGCTTTCTTCTGCACAGAGGAGTaGATGATACGCCCAGTGACGCCATCAATGAGGAAGATGCCAATA +
Preference number: 5 (lower is better)
Translates to: CTIWTGPLAFFCTEE*MIRPVTPSMRKMPI
Trigger: TATTGGCATCTTCCTCATTGATGGCGTCACTGGGCGTATCATTCACTCCTCTGTGCAGAAGAAAGCCAAAGGCCCTGTCCATATCGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000486405.1
ENST00000494770.6
CDS TCA 90 bp CTTCACACCACAAGAGGAAAGCCGACCATTTTAAAGCCAACACACTaGACCACTAAGCTAATTCCTGCTCTCCACTCCAGGGTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: LHTTRGKPTILKPTH*TTKLIPALHSRVPL
Trigger: GAGAGGCACCCTGGAGTGGAGAGCAGGAATTAGCTTAGTGGTTCAGTGTGTTGGCTTTAAAATGGTCGGCTTTCCTCTTGTGGTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461353.1
CDS GCA 90 bp GGGCTTCCGAGCATCATAAAACATTTTCCAGAGGTGGGAAGTCCATaGTTGCAGCAGGATAAGCTGAGACGAGAGGCGTTTCAGGAACAT +
Preference number: 5 (lower is better)
Translates to: GLPSIIKHFPEVGSP*LQQDKLRREAFQEH
Trigger: ATGTTCCTGAAACGCCTCTCGTCTCAGCTTATCCTGCTGCAAGCATGGACTTCCCACCTCTGGAAAATGTTTTATGATGCTCGGAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000641089.1
CDS GCA 90 bp AGTCTTTGTTCTTTATCGCCAGGCCCGATTCAGGAGCTTCACCTGTaGCAGTCTCTTAGTGATCATGGTGGCAAAAACCAGGCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: SLCSLSPGPIQELHL*QSLSDHGGKNQAKE
Trigger: CTCTTTGGCCTGGTTTTTGCCACCATGATCACTAAGAGACTGGCACAGGTGAAGCTCCTGAATCGGGCCTGGCGATAAAGAACAAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000461353.1
ENST00000477853.6
ENST00000480380.1
CDS-3UTR CAA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGGTGGGAAGTCCATGCTaGCAGCAGGATAAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: NADAFGLQEKAHQESLRVVGSPC*QQDKLR
Trigger: TCTCAGCTTATCCTGCTGCAAGCATGGACTTCCCAC...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGATCATCTTCTGGAGGTaGAATTCATCTCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LLWREAMRGWISPQASAKIIFWR*NSSLAR
Trigger: CCTGGCCAGAGATGAATTCAACCTCCAGAAGATGAT...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGTCAATGCCAAAAAGCTaGCCTGAGGCTGTTACCATC +
Preference number: 5 (lower is better)
Translates to: LLWREAMRGWISPQASAKSMPKS*PEAVTI
Trigger: GATGGTAACAGCCTCAGGCAAGCTTTTTGGCATTGA...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTTCGTTGCGCCGAGCCTaGGTGTTCCAGTACTGGTAC +
Preference number: 5 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFSLRRA*VFQYWY
Trigger: GTACCAGTACTGGAACACCAAGGCTCGGCGCAACGA...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS TCA 90 bp GGGAAAGAATTGCTCCAGAAGGTAGTCCAACTACACAGGAGGAAGTaGATGTTCACACCGATCCAGTGTCCAGCAAGGGCCAGTTACAAA +
Preference number: 5 (lower is better)
Translates to: GKELLQKVVQLHRRK*MFTPIQCPARASYK
Trigger: TTTGTAACTGGCCCTTGCTGGACACTGGATCGGTGTGAACATTCACTTCCTCCTGTGTAGTTGGACTACCTTCTGGAGCAATTCTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461353.1
ENST00000480380.1
CDS TCA 90 bp ATGCAGCTGCGGTACAGTGGCCAGGGAAGACTGGAGGACCAGGCATaGTCAATCATAGCACCAGTTTCAGTAATGGTGATTAAAGCTGAT +
Preference number: 5 (lower is better)
Translates to: MQLRYSGQGRLEDQA*SIIAPVSVMVIKAD
Trigger: ATCAGCTTTAATCACCATTACTGAAACTGGTGCTATGATTGATCATGCCTGGTCCTCCAGTCTTCCCTGGCCACTGTACCGCAGCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480380.1
CDS-3UTR CAA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTCCTTCTGCCGTGCCCTaGTCAACATGGCGCCACAAG +
Preference number: 5 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFPSAVP*STWRHK
Trigger: CTTGTGGCGCCATGTTGACAAGGGCACGGCAGAAGG...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCGTGGGAAGTCCATGCTaGCAGCAGGATAAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLVGSPC*QQDKLR
Trigger: TCTCAGCTTATCCTGCTGCAAGCATGGACTTCCCAC...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTAAGGAGGAGTCTGGCTaGACATTGGGTAGATACTGT +
Preference number: 5 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFKEESG*TLGRYC
Trigger: ACAGTATCTACCCAATGTCAAGCCAGACTCCTCCTT...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCACCTTGGCGTAGTCTaGATCCATGACTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLHLGVV*IHDWEK
Trigger: CTTCTCCCAGTCATGGATCAAGACTACGCCAAGGTG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCGGAAAAGCTGTGACCTaGTATTCATCATCTATCAAC +
Preference number: 5 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGGKAVT*YSSSIN
Trigger: GTTGATAGATGATGAATACAAGGTCACAGCTTTTCC...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCCGTTTCCCCTTCACCTaGACGATCCGCTGTACTTCT +
Preference number: 5 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLRFPFT*TIRCTS
Trigger: AGAAGTACAGCGGATCGTCAAGGTGAAGGGGAAACG...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CGAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTCGTTTCCCCTTCACCTaGACGATCCGCTGTACTTCT +
Preference number: 5 (lower is better)
Translates to: RVYLFHHRARDGLLCTYIRFPFT*TIRCTS
Trigger: AGAAGTACAGCGGATCGTCAAGGTGAAGGGGAAACG...AATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCATATGGACAGGGCCTTaGGCTTTCTTCTGCACAGAG +
Preference number: 5 (lower is better)
Translates to: MRGWISPQASAKDGSYFFIWTGP*AFFCTE
Trigger: CTCTGTGCAGAAGAAAGCCAAAGGCCCTGTCCATAT...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACCTGAAGGCGGTGGCGTaGTATTGCTCAGTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNLKAVA*YCSVPS
Trigger: TGAGGGCACTGAGCAATACAACGCCACCGCCTTCAG...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCACAATGCAGACGCCTTaGGACTTCAAGAGAAAGCCC +
Preference number: 5 (lower is better)
Translates to: MRGWISPQASAKDGSYFFTMQTP*DFKRKP
Trigger: GGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATTGT...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACAGGCCAGCAGATCACTaGAGGCCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNRPADH*RPGVRD
Trigger: GTCTCGAACTCCTGGCCTCAAGTGATCTGCTGGCCT...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTGGCTTACTGCAGCCTTaGCCTCCTGGGTTCGATTCT +
Preference number: 5 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFGLLQP*PPGFDS
Trigger: AGAATCGAACCCAGGAGGCAAAGGCTGCAGTAAGCC...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477853.6
CDS GCA 90 bp GTGAAAGATTTTTACATTTCCCTCTCAGCCCAACAGCAATATTGCTaGCAGCATCCCACTGGGGGTCCTAAGCTCAAAGGTTCTTCATGG +
Preference number: 5 (lower is better)
Translates to: VKDFYISLSAQQQYC*QHPTGGPKLKGSSW
Trigger: CCATGAAGAACCTTTGAGCTTAGGACCCCCAGTGGGATGCTGGCAGCAATATTGCTGTTGGGCTGAGAGGGAAATGTAAAAATCTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467423.2
CDS GCA 90 bp CTCGTGAAAGATTTTTACATTTCCCTCTCAGCCCAACAGCAATATTaGTGCCAGCATCCCACTGGGGGTCCTAAGCTCAAAGGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LVKDFYISLSAQQQY*CQHPTGGPKLKGSS
Trigger: TGAAGAACCTTTGAGCTTAGGACCCCCAGTGGGATGCTGGCAGCAATATTGCTGTTGGGCTGAGAGGGAAATGTAAAAATCTTTCACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467423.2
CDS-3UTR CAA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACATCAAACTTGCCCACTaGGTCTTCGTAGACCGCGGC +
Preference number: 5 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNIKLAH*VFVDRG
Trigger: GCCGCGGTCTACGAAGACCAAGTGGGCAAGTTTGAT...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGTCCAAGGAGGCAAACTaGACCTTCCCAACATATTGC +
Preference number: 5 (lower is better)
Translates to: NADAFGLQEKAHQESLRVSKEAN*TFPTYC
Trigger: GCAATATGTTGGGAAGGTCAAGTTTGCCTCCTTGGA...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CCTTATTCAGGAATCAGCCAGGCAGAGTTGGCAATGGTAAGTCTTTCATCCCTGTCCAAGGAGGCAAACTaGACCTTCCCAACATATTGC +
Preference number: 5 (lower is better)
Translates to: PYSGISQAELAMVSLSSLSKEAN*TFPTYC
Trigger: GCAATATGTTGGGAAGGTCAAGTTTGCCTCCTTGGA...CAGGGATGAAAGACTTACCATTGCCAACTCTGCCTGGCTGATTCCTGAATAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR CAA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACTCTTCCACATTAAACTaGACAATGTTCACATGGCTG +
Preference number: 5 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHSSTLN*TMFTWL
Trigger: CAGCCATGTGAACATTGTCAAGTTTAATGTGGAAGA...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTGTGGGAAGTCCATGCTaGCAGCAGGATAAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFVGSPC*QQDKLR
Trigger: TCTCAGCTTATCCTGCTGCAAGCATGGACTTCCCAC...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACGGAAAAGCTGTGACCTaGTATTCATCATCTATCAAC +
Preference number: 5 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHGKAVT*YSSSIN
Trigger: GTTGATAGATGATGAATACAAGGTCACAGCTTTTCC...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTGTTCTCCTCTCTGCTTaGTTCTGTTGGGATCTCGGG +
Preference number: 5 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFVLLSA*FCWDLG
Trigger: CCCGAGATCCCAACAGAACAAAGCAGAGAGGAGAAC...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCACAATGCAGACGCCTTaGGACTTCAAGAGAAAGCCC +
Preference number: 5 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLTMQTP*DFKRKP
Trigger: GGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATTGT...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCATTCCCTCCCAGTAGCTaGTTTCAGATTCTGGCACAC +
Preference number: 5 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSFPPSS*FQILAH
Trigger: GTGTGCCAGAATCTGAAACAAGCTACTGGGAGGGAA...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TGCAGCTGTAGCTGCTTATCTGACCCACACTCCCCTGGCTCTCCACTTTTAGGCTGCTTTGAGGTAACTTaGATTACAGCTGAAATACAG +
Preference number: 5 (lower is better)
Translates to: CSCSCLSDPHSPGSPLLGCFEVT*ITAEIQ
Trigger: CTGTATTTCAGCTGTAATCAAAGTTACCTCAAAGCA...GCCTAAAAGTGGAGAGCCAGGGGAGTGTGGGTCAGATAAGCAGCTACAGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CTGCTTGGATGGGTAGACTCGAGTTTGGTAAATGTCCAAACCATAGGCCACAACATCTGTACATCTGCTTaGTTCTGTTGGGATCTCGGG +
Preference number: 5 (lower is better)
Translates to: LLGWVDSSLVNVQTIGHNICTSA*FCWDLG
Trigger: CCCGAGATCCCAACAGAACAAAGCAGATGTACAGAT...GTTGTGGCCTATGGTTTGGACATTTACCAAACTCGAGTCTACCCATCCAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486238.1
CDS CCA 90 bp ATGCCAAAAAGCTTGCCTGAGGCTGTTACCATCACCATCATCTTCTaGAGGTTGAATTCATCTCTGGCCAGGGTGTCAATGTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: MPKSLPEAVTITIIF*RLNSSLARVSMLIS
Trigger: TGAGATCAACATTGACACCCTGGCCAGAGATGAATTCAACCTCCAGAAGATGATGGTGATGGTAACAGCCTCAGGCAAGCTTTTTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCTCCAAGGAGGCAAACTaGACCTTCCCAACATATTGC +
Preference number: 5 (lower is better)
Translates to: PVGEMRDYLFSLEMSSRLSKEAN*TFPTYC
Trigger: GCAATATGTTGGGAAGGTCAAGTTTGCCTCCTTGGA...GAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTATGATTCGGCCTCCATaGGACACAGTGATCACATCC +
Preference number: 5 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFMIRPP*DTVITS
Trigger: GGATGTGATCACTGTGTCCAATGGAGGCCGAATCAT...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAATCCACTAGGAGAGGCATCTTTTGGCCAACATGTTCCTTATTCAGGAATCAGATGATTCGGCCTCCATaGGACACAGTGATCACATCC +
Preference number: 5 (lower is better)
Translates to: ESTRRGIFWPTCSLFRNQMIRPP*DTVITS
Trigger: GGATGTGATCACTGTGTCCAATGGAGGCCGAATCAT...CTGATTCCTGAATAAGGAACATGTTGGCCAAAAGATGCCTCTCCTAGTGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475079.1
CDS-3UTR CAA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGTCTTCCACATTAAACTaGACAATGTTCACATGGCTG +
Preference number: 5 (lower is better)
Translates to: LLWREAMRGWISPQASAKSSTLN*TMFTWL
Trigger: CAGCCATGTGAACATTGTCAAGTTTAATGTGGAAGA...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAAGGAGGAGTCTGGCTaGACATTGGGTAGATACTGT +
Preference number: 5 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSKEESG*TLGRYC
Trigger: ACAGTATCTACCCAATGTCAAGCCAGACTCCTCCTT...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGTTCCCAAAAATGGGATaGAAGACATACAGAGAACTC +
Preference number: 5 (lower is better)
Translates to: LLWREAMRGWISPQASAKFPKMG*KTYREL
Trigger: GAGTTCTCTGTATGTCTTCAATCCCATTTTTGGGAA...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACCACCTTGGCGTAGTCTaGATCCATGACTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNHLGVV*IHDWEK
Trigger: CTTCTCCCAGTCATGGATCAAGACTACGCCAAGGTG...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAGTTCTCCTCTCTGCTTaGTTCTGTTGGGATCTCGGG +
Preference number: 5 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQVLLSA*FCWDLG
Trigger: CCCGAGATCCCAACAGAACAAAGCAGAGAGGAGAAC...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TTACTTTGGAGGGAAGCCATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGACGCTAGTATGCACTaGGCTTCTGATAAATTGAAA +
Preference number: 5 (lower is better)
Translates to: LLWREAMRGWISPQASAKDASMH*ASDKLK
Trigger: TTTCAATTTATCAGAAGCCAAGTGCATACTAGCGTC...CTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCATGGCTTCCCTCCAAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACAGTGTCATTTGTCACTaGCTTTATGCAAACATTCGA +
Preference number: 5 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHSVICH*LYANIR
Trigger: TCGAATGTTTGCATAAAGCAAGTGACAAATGACACT...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACATAAAAACTAGAATCTaGCAGGCTAACCTTGCACAT +
Preference number: 5 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHIKTRI*QANLAH
Trigger: ATGTGCAAGGTTAGCCTGCAAGATTCTAGTTTTTAT...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CACAGTGGCCTAGCCAATCGGCAGTGCTATACACACAGTATGCCAGTTTCCCACTGCTTTGAGGTAACTTaGATTACAGCTGAAATACAG +
Preference number: 5 (lower is better)
Translates to: HSGLANRQCYTHSMPVSHCFEVT*ITAEIQ
Trigger: CTGTATTTCAGCTGTAATCAAAGTTACCTCAAAGCA...GTGGGAAACTGGCATACTGTGTGTATAGCACTGCCGATTGGCTAGGCCACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS GCA 90 bp ATCAATCTTGGGCCTAAGAGCAAACGTTTCCAGATTCAAAAGCACTaGCTTCTAGCATCCATGTCTTGGAGAGATCTCCTGAATCCTAGC +
Preference number: 5 (lower is better)
Translates to: INLGPKSKRFQIQKH*LLASMSWRDLLNPS
Trigger: GCTAGGATTCAGGAGATCTCTCCAAGACATGGATGCTAGAAGGCAGTGCTTTTGAATCTGGAAACGTTTGCTCTTAGGCCCAAGATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467423.2
CDS CCA 90 bp AAACGTTTCCAGATTCAAAAGCACTGCCTTCTAGCATCCATGTCTTaGAGAGATCTCCTGAATCCTAGCAAACCATGTTGCCTGCAGTTA +
Preference number: 5 (lower is better)
Translates to: KRFQIQKHCLLASMS*RDLLNPSKPCCLQL
Trigger: TAACTGCAGGCAACATGGTTTGCTAGGATTCAGGAGATCTCTCCAAGACATGGATGCTAGAAGGCAGTGCTTTTGAATCTGGAAACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467423.2
CDS-3UTR CAA 90 bp ATGAGAGGCTGGATCAGTCCTCAAGCCTCAGCTAAGGATGGATCCTATTTCTTCTTCCCAAAAATGGGATaGAAGACATACAGAGAACTC +
Preference number: 5 (lower is better)
Translates to: MRGWISPQASAKDGSYFFFPKMG*KTYREL
Trigger: GAGTTCTCTGTATGTCTTCAATCCCATTTTTGGGAA...GAAGAAATAGGATCCATCCTTAGCTGAGGCTTGAGGACTGATCCAGCCTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp AATGCAGACGCCTTTGGACTTCAAGAGAAAGCCCATCAGGAATCTCTGAGAGTGGGAAAAGCTGTGACCTaGTATTCATCATCTATCAAC +
Preference number: 5 (lower is better)
Translates to: NADAFGLQEKAHQESLRVGKAVT*YSSSIN
Trigger: GTTGATAGATGATGAATACAAGGTCACAGCTTTTCC...CACTCTCAGAGATTCCTGATGGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAAGTACGGTAAACTCGTaGCGCCGAGCCTTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKSTVNS*RRALVF
Trigger: GAACACCAAGGCTCGGCGCAACGAGTTTACCGTACT...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGGGCGGTGGCGTTGTATaGCTCAGTGCCCTCATAGAG +
Preference number: 5 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQGGGVV*LSALIE
Trigger: CTCTATGAGGGCACTGAGCAATACAACGCCACCGCC...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp AATACAGGGAATTTTACTAAAGGACAAATACCTTCCCTCCCAGTAGCTTGTTTCGTTCTCCTCTCTGCTTaGTTCTGTTGGGATCTCGGG +
Preference number: 5 (lower is better)
Translates to: NTGNFTKGQIPSLPVACFVLLSA*FCWDLG
Trigger: CCCGAGATCCCAACAGAACAAAGCAGAGAGGAGAAC...GAAACAAGCTACTGGGAGGGAAGGTATTTGTCCTTTAGTAAAATTCCCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp AGTTTGGTAAATGTCCAAACCATAGGCCACAACCAAACAAGTGGACTCCAGACCTGGGTAGACTCGAGTTaGGTAAATGTCCAAACCATA +
Preference number: 5 (lower is better)
Translates to: SLVNVQTIGHNQTSGLQTWVDSS*VNVQTI
Trigger: TATGGTTTGGACATTTACCAAACTCGAGTCTACCCA...GGTCTGGAGTCCACTTGTTTGGTTGTGGCCTATGGTTTGGACATTTACCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486238.1
CDS-3UTR CAA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTACAATGCAGACGCCTTaGGACTTCAAGAGAAAGCCC +
Preference number: 5 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFTMQTP*DFKRKP
Trigger: GGGCTTTCTCTTGAAGTCCAAAGGCGTCTGCATTGT...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GCAGTGCTATACACACAGTATGCCAGTTTCCCACCCCTACCCTCTTTCTCCTTTTTGGCTTCTGATAAATaGAAACAAAGATTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: AVLYTQYASFPPLPSFSFLASDK*KQRFGG
Trigger: GCCACCAAATCTTTGTTTCAATTTATCAGAAGCCAA...AAAGGAGAAAGAGGGTAGGGGTGGGAAACTGGCATACTGTGTGTATAGCACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAACGTTTCCCCTTCACCTaGACGATCCGCTGTACTTCT +
Preference number: 5 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKRFPFT*TIRCTS
Trigger: AGAAGTACAGCGGATCGTCAAGGTGAAGGGGAAACG...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTAGTACGGTAAACTCGTaGCGCCGAGCCTTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: DTKEDLNSVICHLLYANISTVNS*RRALVF
Trigger: GAACACCAAGGCTCGGCGCAACGAGTTTACCGTACT...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTTGGGTAGACTCGAGTTaGGTAAATGTCCAAACCATA +
Preference number: 5 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFWVDSS*VNVQTI
Trigger: TATGGTTTGGACATTTACCAAACTCGAGTCTACCCA...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGTTCCCCTCTTACTTaGAAGCAAGAGATGGAAAAA +
Preference number: 5 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSSSPLT*KQEMEK
Trigger: TTTTTCCATCTCTTGCTTCAAAGTAAGAGGGGAACT...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS GCA 90 bp GTGGTTGTTAATACAACAATACCAACAGTGAATAAGATATTGGCTTaGCCACATGGTCTGGCCCGAATTACCTCAGTGATCTCATTTCCT +
Preference number: 5 (lower is better)
Translates to: VVVNTTIPTVNKILA*PHGLARITSVISFP
Trigger: AGGAAATGAGATCACTGAGGTAATTCGGGCCAGACCATGTGGGCAAGCCAATATCTTATTCACTGTTGGTATTGTTGTATTAACAACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461353.1
CDS-3UTR CAA 90 bp GAGTGTACCTCTTTCACCACAGGGCTAGAGATGGTCTACTCTGTACATACATTTTCTTCCACATTAAACTaGACAATGTTCACATGGCTG +
Preference number: 5 (lower is better)
Translates to: ECTSFTTGLEMVYSVHTFSSTLN*TMFTWL
Trigger: CAGCCATGTGAACATTGTCAAGTTTAATGTGGAAGA...AAATGTATGTACAGAGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGCACCTTGGCGTAGTCTaGATCCATGACTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQHLGVV*IHDWEK
Trigger: CTTCTCCCAGTCATGGATCAAGACTACGCCAAGGTG...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATGGGTAGACTCGAGTTaGGTAAATGTCCAAACCATA +
Preference number: 5 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQWVDSS*VNVQTI
Trigger: TATGGTTTGGACATTTACCAAACTCGAGTCTACCCA...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GACCAGCCTGTGGGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCATTGGCTTCTGATAAATaGAAACAAAGATTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: DQPVGEMRDYLFSLEMSSLASDK*KQRFGG
Trigger: GCCACCAAATCTTTGTTTCAATTTATCAGAAGCCAA...TGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACCCACAGGCTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTGACCTTCCCAACATATaGCTGTCTCCAATCAAACTT +
Preference number: 5 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFDLPNI*LSPIKL
Trigger: AAGTTTGATTGGAGACAGCAATATGTTGGGAAGGTC...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp CCTTGCACATATGTATGTAAGACAGTCAGAATTCCAGCCAGGCTTTCTCAAAACTTCCCAAAAATGGGATaGAAGACATACAGAGAACTC +
Preference number: 5 (lower is better)
Translates to: PCTYVCKTVRIPARLSQNFPKMG*KTYREL
Trigger: GAGTTCTCTGTATGTCTTCAATCCCATTTTTGGGAA...GTTTTGAGAAAGCCTGGCTGGAATTCTGACTGTCTTACATACATATGTGCAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GACACAAAAGAGGACTTAAACAGTGTCATTTGTCACTTGCTTTATGCAAACATTATATGGACAGGGCCTTaGGCTTTCTTCTGCACAGAG +
Preference number: 5 (lower is better)
Translates to: DTKEDLNSVICHLLYANIIWTGP*AFFCTE
Trigger: CTCTGTGCAGAAGAAAGCCAAAGGCCCTGTCCATAT...AATGTTTGCATAAAGCAAGTGACAAATGACACTGTTTAAGTCCTCTTTTGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGATCATCTTCTGGAGGTaGAATTCATCTCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQIIFWR*NSSLAR
Trigger: CCTGGCCAGAGATGAATTCAACCTCCAGAAGATGAT...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTAGTTCCCCTCTTACTTaGAAGCAAGAGATGGAAAAA +
Preference number: 5 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFSSPLT*KQEMEK
Trigger: TTTTTCCATCTCTTGCTTCAAAGTAAGAGGGGAACT...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GGTGAAATGAGAGATTATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAAATAAAAACTAGAATCTaGCAGGCTAACCTTGCACAT +
Preference number: 5 (lower is better)
Translates to: GEMRDYLFSLEMSSRLRQIKTRI*QANLAH
Trigger: ATGTGCAAGGTTAGCCTGCAAGATTCTAGTTTTTAT...TTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGATAATCTCTCATTTCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS TCA 90 bp TGGGCTTGCAGCAATATCTTATTTAAGGACACTCAGGATTCAAGCTaGGAGAACAAACCGCAAAGGTCAGTTATAGGAACATACAAATAT +
Preference number: 5 (lower is better)
Translates to: WACSNILFKDTQDSS*ENKPQRSVIGTYKY
Trigger: ATATTTGTATGTTCCTATAACTGACCTTTGCGGTTTGTTCTCTCAGCTTGAATCCTGAGTGTCCTTAAATAAGATATTGCTGCAAGCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488681.1
CDS-3UTR CAA 90 bp TTCTCCCAGGTTATGTTAAAATATGCCTTGGGTCAGGATGATAGATGCCTGTTTAGTGTCATTTGTCACTaGCTTTATGCAAACATTCGA +
Preference number: 5 (lower is better)
Translates to: FSQVMLKYALGQDDRCLFSVICH*LYANIR
Trigger: TCGAATGTTTGCATAAAGCAAGTGACAAATGACACT...AAACAGGCATCTATCATCCTGACCCAAGGCATATTTTAACATAACCTGGGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp ATCTCTTCTCCCTGGAAATGTCTTCAAGGCTCAGACAATTCAGTAGTTTTTAAAATGTTAAAATATGCCTaGGGTCAGGATGATAGATGC +
Preference number: 5 (lower is better)
Translates to: ISSPWKCLQGSDNSVVFKMLKYA*GQDDRC
Trigger: GCATCTATCATCCTGACCCAAGGCATATTTTAACAT...TTTAAAAACTACTGAATTGTCTGAGCCTTGAAGACATTTCCAGGGAGAAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGAGTTCCCCTCTTACTTaGAAGCAAGAGATGGAAAAA +
Preference number: 5 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQSSPLT*KQEMEK
Trigger: TTTTTCCATCTCTTGCTTCAAAGTAAGAGGGGAACT...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGGACGCTAGTATGCACTaGGCTTCTGATAAATTGAAA +
Preference number: 5 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQDASMH*ASDKLK
Trigger: TTTCAATTTATCAGAAGCCAAGTGCATACTAGCGTC...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS-3UTR CAA 90 bp GAGAAACACAAAAGGCAAAGTAAAGTCAATTTAAACAGGCCTCACAAAAATCAGATGTTAAAATATGCCTaGGGTCAGGATGATAGATGC +
Preference number: 5 (lower is better)
Translates to: EKHKRQSKVNLNRPHKNQMLKYA*GQDDRC
Trigger: GCATCTATCATCCTGACCCAAGGCATATTTTAACAT...CTGATTTTTGTGAGGCCTGTTTAAATTGACTTTACTTTGCCTTTTGTGTTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS CCA 72 bp AAGAACTGGGCCCGGGAAGCGTCCACTGGGTTGGGCTaGGTAGGCAGGACCCGGGGTTGGAATCCACTTCCA +
Preference number: 6 (lower is better)
Translates to: KNWAREASTGLG*VGRTRGWNPLP
Trigger: TGGAAGTGGATTCCAACCCCGGGTCCTGCCTACCCAGCCCAACCCAGTGGACGCTTCCCGGGCCCAGTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000467423.2
ENST00000477853.6
CDS CCA 72 bp GCGCGTCTGTGCTCTCTGTCACCACGGCCAGCAGGTTaGGGTTCAGGCTCTTGTAGAGCACACTGCGGTCCC +
Preference number: 6 (lower is better)
Translates to: ARLCSLSPRPAG*GSGSCRAHCGP
Trigger: GGGACCGCAGTGTGCTCTACAAGAGCCTGAACCCCAACCTGCTGGCCGTGGTGACAGAGAGCACAGACGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000494770.6
CDS CAA 90 bp GGGGACAAGTGCAGGAAGAACTGGGCCCGGGAAGCGTCCACTGGGTaGGGCTGGGTAGGCAGGACCCGGGGTTGGAATCCACTTCCAAAT +
Preference number: 6 (lower is better)
Translates to: GDKCRKNWAREASTG*GWVGRTRGWNPLPN
Trigger: ATTTGGAAGTGGATTCCAACCCCGGGTCCTGCCTACCCAGCCCAACCCAGTGGACGCTTCCCGGGCCCAGTTCTTCCTGCACTTGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000467423.2
ENST00000477853.6
CDS CAA 72 bp GAGCCTTCAGCACTGCCCATGAGGGTCTCACCTGCTTaGTTCTGTTGGGATCTCGGGGCGGCGGGGATCCAG +
Preference number: 6 (lower is better)
Translates to: EPSALPMRVSPA*FCWDLGAAGIQ
Trigger: CTGGATCCCCGCCGCCCCGAGATCCCAACAGAACAAAGCAGGTGAGACCCTCATGGGCAGTGCTGAAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461353.1
CDS TCA 72 bp AGCACACTGCGGTCCCCCATCACACGGCCCTGGGAATaGACGTGCTCACTGCTGCGTTTCCCCTTCACCTTG +
Preference number: 6 (lower is better)
Translates to: STLRSPITRPWE*TCSLLRFPFTL
Trigger: CAAGGTGAAGGGGAAACGCAGCAGTGAGCACGTTCATTCCCAGGGCCGTGTGATGGGGGACCGCAGTGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000494770.6
CDS CAA 72 bp AGCAGCATGGCATCCACAGCCCCTTCTGCCGTGCCCTaGTCAACATGGCGCCACAAGATCTCCCCAGTTCGG +
Preference number: 6 (lower is better)
Translates to: SSMASTAPSAVP*STWRHKISPVR
Trigger: CCGAACTGGGGAGATCTTGTGGCGCCATGTTGACAAGGGCACGGCAGAAGGGGCTGTGGATGCCATGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375199.7
ENST00000477853.6
CDS CAA 72 bp AGCACTGCCCATGAGGGTCTCACCTGCTTTGTTCTGTaGGGATCTCGGGGCGGCGGGGATCCAGCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: STAHEGLTCFVL*GSRGGGDPAKP
Trigger: AGGCTTTGCTGGATCCCCGCCGCCCCGAGATCCCAACAGAACAAAGCAGGTGAGACCCTCATGGGCAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461353.1
CDS CAA 72 bp GGGGCGGTCCAGGGAGCTGAAGGCGGTGGCGTTGTATaGCTCAGTGCCCTCATAGAGCTCCAGTACGGTAAA +
Preference number: 6 (lower is better)
Translates to: GAVQGAEGGGVV*LSALIELQYGK
Trigger: TTTACCGTACTGGAGCTCTATGAGGGCACTGAGCAATACAACGCCACCGCCTTCAGCTCCCTGGACCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000462505.1
ENST00000477853.6
ENST00000486405.1
ENST00000494770.6
CDS TCA 72 bp CCATTCCGTCTCCAGAGCCAAAGTTTGGAGGGAACGTaGGCTCGGGTCAGGACACACCAGGACAGCCTCATC +
Preference number: 6 (lower is better)
Translates to: PFRLQSQSLEGT*ARVRTHQDSLI
Trigger: GATGAGGCTGTCCTGGTGTGTCCTGACCCGAGCTCACGTTCCCTCCAAACTTTGGCTCTGGAGACGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000467423.2
ENST00000477853.6
CDS CCA 72 bp GTAAACTCGTTGCGCCGAGCCTTGGTGTTCCAGTACTaGTACTGCAGGGATAGGAGGTGGCAGCTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: VNSLRRALVFQY*YCRDRRWQLRA
Trigger: AGCCCTGAGCTGCCACCTCCTATCCCTGCAGTACCAGTACTGGAACACCAAGGCTCGGCGCAACGAGTTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462505.1
CDS TCA 72 bp GGATGCTGTCACTTTCTGGGAGATGTTCCACCCACTTaGGGTGCCCACTGGAGAGGTGATGGAGGGCAAGTG +
Preference number: 6 (lower is better)
Translates to: GCCHFLGDVPPT*GAHWRGDGGQV
Trigger: CACTTGCCCTCCATCACCTCTCCAGTGGGCACCTCAAGTGGGTGGAACATCTCCCAGAAAGTGACAGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS TCA 72 bp TCCCATACCTCCCCCAGCAGGAAGTCTCCTTCCCATTaGGCAAACGCAGCTGTTCATGCAGCTGCGGTACAG +
Preference number: 6 (lower is better)
Translates to: SHTSPSRKSPSH*ANAAVHAAAVQ
Trigger: CTGTACCGCAGCTGCATGAACAGCTGCGTTTGCTCAATGGGAAGGAGACTTCCTGCTGGGGGAGGTATGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480380.1
CDS GCA 72 bp TCAATGAGGAAGATGCCAATAAAGGTGCGCTCATGGTaGGCGTCTGTGCTCTCTGTCACCACGGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SMRKMPIKVRSW*ASVLSVTTASR
Trigger: CCTGCTGGCCGTGGTGACAGAGAGCACAGACGCGCACCATGAGCGCACCTTTATTGGCATCTTCCTCATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000494770.6
CDS GCA 72 bp GAAGTCTCCTTCCCATTGAGCAAACGCAGCTGTTCATaGAGCTGCGGTACAGTGGCCAGGGAAGACTGGAGG +
Preference number: 6 (lower is better)
Translates to: EVSFPLSKRSCS*SCGTVAREDWR
Trigger: CCTCCAGTCTTCCCTGGCCACTGTACCGCAGCTGCATGAACAGCTGCGTTTGCTCAATGGGAAGGAGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480380.1
CDS CCA 72 bp TGTCTCAACTCCCATTCCGTCTCCAGAGCCAAAGTTTaGAGGGAACGTGAGCTCGGGTCAGGACACACCAGG +
Preference number: 6 (lower is better)
Translates to: CLNSHSVSRAKV*RERELGSGHTR
Trigger: CCTGGTGTGTCCTGACCCGAGCTCACGTTCCCTCCAAACTTTGGCTCTGGAGACGGAATGGGAGTTGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000467423.2
ENST00000477853.6
CDS CCA 72 bp GCGTTTCCCCTTCACCTTGACGATCCGCTGTACTTCTaGGGGAATGGTCAGCTCCCAACTCAGCTCAGTGGT +
Preference number: 6 (lower is better)
Translates to: AFPLHLDDPLYF*GNGQLPTQLSG
Trigger: ACCACTGAGCTGAGTTGGGAGCTGACCATTCCCCCAGAAGTACAGCGGATCGTCAAGGTGAAGGGGAAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000494770.6
CDS CCA 72 bp CCATCAATGAGGAAGATGCCAATAAAGGTGCGCTCATaGTGCGCGTCTGTGCTCTCTGTCACCACGGCCAGC +
Preference number: 6 (lower is better)
Translates to: PSMRKMPIKVRS*CASVLSVTTAS
Trigger: GCTGGCCGTGGTGACAGAGAGCACAGACGCGCACCATGAGCGCACCTTTATTGGCATCTTCCTCATTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000494770.6
CDS CAA 72 bp CTCCCATACCTCCCCCAGCAGGAAGTCTCCTTCCCATaGAGCAAACGCAGCTGTTCATGCAGCTGCGGTACA +
Preference number: 6 (lower is better)
Translates to: LPYLPQQEVSFP*SKRSCSCSCGT
Trigger: TGTACCGCAGCTGCATGAACAGCTGCGTTTGCTCAATGGGAAGGAGACTTCCTGCTGGGGGAGGTATGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480380.1
CDS TCA 72 bp CAGAGGTGGGAAGTCCATGCTTGCAGCAGGATAAGCTaGGACGAGAGGCGTTTCAGGAACATCCCCAGCAAG +
Preference number: 6 (lower is better)
Translates to: QRWEVHACSRIS*DERRFRNIPSK
Trigger: CTTGCTGGGGATGTTCCTGAAACGCCTCTCGTCTCAGCTTATCCTGCTGCAAGCATGGACTTCCCACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000641089.1
CDS GCA 72 bp GCTACTTTTCTGCACTTCATTCCGACAGGCCATGACTaGAGCCACCGTCTTCTCCCCAGTGGTGGCAAAGCT +
Preference number: 6 (lower is better)
Translates to: ATFLHFIPTGHD*SHRLLPSGGKA
Trigger: AGCTTTGCCACCACTGGGGAGAAGACGGTGGCTGCAGTCATGGCCTGTCGGAATGAAGTGCAGAAAAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375208.7
ENST00000477853.6
CDS GCA 72 bp GCAGGGATAGGAGGTGGCAGCTCAGGGCTTAGCAGCTaGTTCAACTGGAAAGGGAAATTGCACTGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: AGIGGGSSGLSS*FNWKGKLHWKA
Trigger: TGCCTTCCAGTGCAATTTCCCTTTCCAGTTGAAGCAGCTGCTAAGCCCTGAGCTGCCACCTCCTATCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462505.1
CDS GCA 72 bp GCCTCATCCACCACACCACAGGCTCCAGACAGGTGCTaGAGCCACGGAGTTGAAACCCTAACCTACAGAAAA +
Preference number: 6 (lower is better)
Translates to: ASSTTPQAPDRC*SHGVETLTYRK
Trigger: TTTTCTGTAGGTTAGGGTTTCAACTCCGTGGCTGCAGCACCTGTCTGGAGCCTGTGGTGTGGTGGATGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467423.2
CDS TCA 72 bp AATGAACGTGCTCACTGCTGCGTTTCCCCTTCACCTTaGCGATCCGCTGTACTTCTGGGGGAATGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: NERAHCCVSPSP*RSAVLLGEWSA
Trigger: AGCTGACCATTCCCCCAGAAGTACAGCGGATCGTCAAGGTGAAGGGGAAACGCAGCAGTGAGCACGTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000494770.6
CDS GCA 72 bp GAGGTGATGGAGGGCAAGTGTAGTCTTCTTCAGGACTaGGATGTACCTTACAGACTCCTGCAGGCCAACCAG +
Preference number: 6 (lower is better)
Translates to: EVMEGKCSLLQD*DVPYRLLQANQ
Trigger: CTGGTTGGCCTGCAGGAGTCTGTAAGGTACATCGCAGTCCTGAAGAAGACTACACTTGCCCTCCATCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS CCA 72 bp CAACAGCAACACCTTGGCGTAGTCTTGATCCATGACTaGGAGAAGCAAGGACTGCAAGATGGGGCGCTTCAG +
Preference number: 6 (lower is better)
Translates to: QQQHLGVVLIHD*EKQGLQDGALQ
Trigger: CTGAAGCGCCCCATCTTGCAGTCCTTGCTTCTCCCAGTCATGGATCAAGACTACGCCAAGGTGTTGCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS CAA 72 bp CCCAACATATTGCTGTCTCCAATCAAACTTGCCCACTaGGTCTTCGTAGACCGCGGCCGCAGGAATCAGCAG +
Preference number: 6 (lower is better)
Translates to: PNILLSPIKLAH*VFVDRGRRNQQ
Trigger: CTGCTGATTCCTGCGGCCGCGGTCTACGAAGACCAAGTGGGCAAGTTTGATTGGAGACAGCAATATGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000475079.1
ENST00000477853.6
ENST00000488681.1
CDS TCA 72 bp TGGACAGGGCCTTTGGCTTTCTTCTGCACAGAGGAGTaGATGATACGCCCAGTGACGCCATCAATGAGGAAG +
Preference number: 6 (lower is better)
Translates to: WTGPLAFFCTEE*MIRPVTPSMRK
Trigger: CTTCCTCATTGATGGCGTCACTGGGCGTATCATTCACTCCTCTGTGCAGAAGAAAGCCAAAGGCCCTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000486405.1
ENST00000494770.6
CDS GCA 72 bp CTTTCGAAGCCGATATCCACACAGCCGTCCCTGCTCTaGATCCACCAAATAGAAGAAGATGGAAGGGGCAAG +
Preference number: 6 (lower is better)
Translates to: LSKPISTQPSLL*IHQIEEDGRGK
Trigger: CTTGCCCCTTCCATCTTCTTCTATTTGGTGGATGCAGAGCAGGGACGGCTGTGTGGATATCGGCTTCGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS GCA 72 bp GTGTTCCAGTACTGGTACACCACCCAGTTCTCTGAATaGACGATATGGACAGGGCCTTTGGCTTTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: VFQYWYTTQFSE*TIWTGPLAFFC
Trigger: GCAGAAGAAAGCCAAAGGCCCTGTCCATATCGTGCATTCAGAGAACTGGGTGGTGTACCAGTACTGGAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000486405.1
ENST00000494770.6
CDS GCA 72 bp TCTTTATCGCCAGGCCCGATTCAGGAGCTTCACCTGTaGCAGTCTCTTAGTGATCATGGTGGCAAAAACCAG +
Preference number: 6 (lower is better)
Translates to: SLSPGPIQELHL*QSLSDHGGKNQ
Trigger: CTGGTTTTTGCCACCATGATCACTAAGAGACTGGCACAGGTGAAGCTCCTGAATCGGGCCTGGCGATAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000461353.1
ENST00000477853.6
ENST00000480380.1
CDS CCA 72 bp TACTGGTACACCACCCAGTTCTCTGAATGCACGATATaGACAGGGCCTTTGGCTTTCTTCTGCACAGAGGAG +
Preference number: 6 (lower is better)
Translates to: YWYTTQFSECTI*TGPLAFFCTEE
Trigger: CTCCTCTGTGCAGAAGAAAGCCAAAGGCCCTGTCCATATCGTGCATTCAGAGAACTGGGTGGTGTACCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000486405.1
ENST00000494770.6
CDS CAA 72 bp CCCTCCGCAAACTCACCAGACATGATCTCAGGGGATTaGCATTGCCTGTTCCCTCTGCCTAGAAAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: PSANSPDMISGD*HCLFPLPRKFF
Trigger: GAAGAACTTTCTAGGCAGAGGGAACAGGCAATGCAAATCCCCTGAGATCATGTCTGGTGAGTTTGCGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461353.1
CDS CAA 90 bp CTTCCGAGCATCATAAAACATTTTCCAGAGGTGGGAAGTCCATGCTaGCAGCAGGATAAGCTGAGACGAGAGGCGTTTCAGGAACATCCC +
Preference number: 6 (lower is better)
Translates to: LPSIIKHFPEVGSPC*QQDKLRREAFQEHP
Trigger: GGGATGTTCCTGAAACGCCTCTCGTCTCAGCTTATCCTGCTGCAAGCATGGACTTCCCACCTCTGGAAAATGTTTTATGATGCTCGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000641089.1
CDS TCA 72 bp ATGATCCTCTGTCTGCACCAAAGCCCGGTAGCCCACTaGGTCATCCTTCTTCAAGAACACCTGGATATACAG +
Preference number: 6 (lower is better)
Translates to: MILCLHQSPVAH*VILLQEHLDIQ
Trigger: CTGTATATCCAGGTGTTCTTGAAGAAGGATGACTCAGTGGGCTACCGGGCTTTGGTGCAGACAGAGGATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000641089.1
CDS TCA 72 bp CTTGGTGTTCCAGTACTGGTACACCACCCAGTTCTCTaGATGCACGATATGGACAGGGCCTTTGGCTTTCTT +
Preference number: 6 (lower is better)
Translates to: LGVPVLVHHPVL*MHDMDRAFGFL
Trigger: AAGAAAGCCAAAGGCCCTGTCCATATCGTGCATTCAGAGAACTGGGTGGTGTACCAGTACTGGAACACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000486405.1
ENST00000494770.6
CDS TCA 72 bp CGGTACAGTGGCCAGGGAAGACTGGAGGACCAGGCATaGTCAATCATAGCACCAGTTTCAGTAATGGTGATT +
Preference number: 6 (lower is better)
Translates to: RYSGQGRLEDQA*SIIAPVSVMVI
Trigger: AATCACCATTACTGAAACTGGTGCTATGATTGATCATGCCTGGTCCTCCAGTCTTCCCTGGCCACTGTACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480380.1
CDS GCA 72 bp TGGGTAGATACTGTTTCCACAGGATGGTGCCAGAGCTaGTCTCAATGCCAAAAAGCTTGCCTGAGGCTGTTA +
Preference number: 6 (lower is better)
Translates to: WVDTVSTGWCQS*SQCQKACLRLL
Trigger: TAACAGCCTCAGGCAAGCTTTTTGGCATTGAGAGCAGCTCTGGCACCATCCTGTGGAAACAGTATCTACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS CAA 90 bp GTAGTTCTCTGGACCATCAGTTTAAAGGAGGAGTCTGGCTTGACATaGGGTAGATACTGTTTCCACAGGATGGTGCCAGAGCTGCTCTCA +
Preference number: 6 (lower is better)
Translates to: VVLWTISLKEESGLT*GRYCFHRMVPELLS
Trigger: TGAGAGCAGCTCTGGCACCATCCTGTGGAAACAGTATCTACCCAATGTCAAGCCAGACTCCTCCTTTAAACTGATGGTCCAGAGAACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS CAA 90 bp GACCTTGTATTCATCATCTATCAACAGCAACACCTTGGCGTAGTCTaGATCCATGACTGGGAGAAGCAAGGACTGCAAGATGGGGCGCTT +
Preference number: 6 (lower is better)
Translates to: DLVFIIYQQQHLGVV*IHDWEKQGLQDGAL
Trigger: AAGCGCCCCATCTTGCAGTCCTTGCTTCTCCCAGTCATGGATCAAGACTACGCCAAGGTGTTGCTGTTGATAGATGATGAATACAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS GCA 72 bp GATTTTTACATTTCCCTCTCAGCCCAACAGCAATATTaGTGCCAGCATCCCACTGGGGGTCCTAAGCTCAAA +
Preference number: 6 (lower is better)
Translates to: DFYISLSAQQQY*CQHPTGGPKLK
Trigger: TTTGAGCTTAGGACCCCCAGTGGGATGCTGGCAGCAATATTGCTGTTGGGCTGAGAGGGAAATGTAAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467423.2
CDS GCA 72 bp GGGCCTAAGAGCAAACGTTTCCAGATTCAAAAGCACTaGCTTCTAGCATCCATGTCTTGGAGAGATCTCCTG +
Preference number: 6 (lower is better)
Translates to: GPKSKRFQIQKH*LLASMSWRDLL
Trigger: CAGGAGATCTCTCCAAGACATGGATGCTAGAAGGCAGTGCTTTTGAATCTGGAAACGTTTGCTCTTAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467423.2
CDS CAA 72 bp TGGACCATCAGTTTAAAGGAGGAGTCTGGCTTGACATaGGGTAGATACTGTTTCCACAGGATGGTGCCAGAG +
Preference number: 6 (lower is better)
Translates to: WTISLKEESGLT*GRYCFHRMVPE
Trigger: CTCTGGCACCATCCTGTGGAAACAGTATCTACCCAATGTCAAGCCAGACTCCTCCTTTAAACTGATGGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS TCA 72 bp TCATGGTGGCAAAAACCAGGCCAAAGAGGACGCTGCTaGTTAACACGTAGTCATAGTCATCCTTCAGAACGT +
Preference number: 6 (lower is better)
Translates to: SWWQKPGQRGRC*LTRSHSHPSER
Trigger: ACGTTCTGAAGGATGACTATGACTACGTGTTAATCAGCAGCGTCCTCTTTGGCCTGGTTTTTGCCACCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000461353.1
ENST00000477853.6
ENST00000480380.1
CDS GCA 72 bp AGCATCATAAAACATTTTCCAGAGGTGGGAAGTCCATaGTTGCAGCAGGATAAGCTGAGACGAGAGGCGTTT +
Preference number: 6 (lower is better)
Translates to: SIIKHFPEVGSP*LQQDKLRREAF
Trigger: AAACGCCTCTCGTCTCAGCTTATCCTGCTGCAAGCATGGACTTCCCACCTCTGGAAAATGTTTTATGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000641089.1
CDS CAA 72 bp ATCATAAAACATTTTCCAGAGGTGGGAAGTCCATGCTaGCAGCAGGATAAGCTGAGACGAGAGGCGTTTCAG +
Preference number: 6 (lower is better)
Translates to: IIKHFPEVGSPC*QQDKLRREAFQ
Trigger: CTGAAACGCCTCTCGTCTCAGCTTATCCTGCTGCAAGCATGGACTTCCCACCTCTGGAAAATGTTTTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
ENST00000641089.1
CDS CAA 72 bp GTTCTCTGGACCATCAGTTTAAAGGAGGAGTCTGGCTaGACATTGGGTAGATACTGTTTCCACAGGATGGTG +
Preference number: 6 (lower is better)
Translates to: VLWTISLKEESG*TLGRYCFHRMV
Trigger: CACCATCCTGTGGAAACAGTATCTACCCAATGTCAAGCCAGACTCCTCCTTTAAACTGATGGTCCAGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS CAA 72 bp CCCTCTCAAACCACTTACGGGAAGGTGTCATCAATCTaGGGCCTAAGAGCAAACGTTTCCAGATTCAAAAGC +
Preference number: 6 (lower is better)
Translates to: PSQTTYGKVSSI*GLRANVSRFKS
Trigger: GCTTTTGAATCTGGAAACGTTTGCTCTTAGGCCCAAGATTGATGACACCTTCCCGTAAGTGGTTTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467423.2
CDS CCA 72 bp CAGATTCAAAAGCACTGCCTTCTAGCATCCATGTCTTaGAGAGATCTCCTGAATCCTAGCAAACCATGTTGC +
Preference number: 6 (lower is better)
Translates to: QIQKHCLLASMS*RDLLNPSKPCC
Trigger: GCAACATGGTTTGCTAGGATTCAGGAGATCTCTCCAAGACATGGATGCTAGAAGGCAGTGCTTTTGAATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467423.2
CDS CAA 72 bp TTCATCATCTATCAACAGCAACACCTTGGCGTAGTCTaGATCCATGACTGGGAGAAGCAAGGACTGCAAGAT +
Preference number: 6 (lower is better)
Translates to: FIIYQQQHLGVV*IHDWEKQGLQD
Trigger: ATCTTGCAGTCCTTGCTTCTCCCAGTCATGGATCAAGACTACGCCAAGGTGTTGCTGTTGATAGATGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000477853.6
CDS CAA 90 bp AAGATGGTGGTTGTTAATACAACAATACCAACAGTGAATAAGATATaGGCTTGCCCACATGGTCTGGCCCGAATTACCTCAGTGATCTCA +
Preference number: 6 (lower is better)
Translates to: KMVVVNTTIPTVNKI*ACPHGLARITSVIS
Trigger: TGAGATCACTGAGGTAATTCGGGCCAGACCATGTGGGCAAGCCAATATCTTATTCACTGTTGGTATTGTTGTATTAACAACCACCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461353.1
CDS CCA 72 bp TTCGGGAATTTAATGCTGCAATCACATTCTTCTCTGTaGCTACAACCAACTTCTTGGATCCAGGGGAAAATT +
Preference number: 6 (lower is better)
Translates to: FGNLMLQSHSSL*LQPTSWIQGKI
Trigger: AATTTTCCCCTGGATCCAAGAAGTTGGTTGTAGCCACAGAGAAGAATGTGATTGCAGCATTAAATTCCCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375199.7
ENST00000375208.7
ENST00000475079.1
ENST00000477853.6
ENST00000488681.1
CDS CAA 72 bp GTTGTTAATACAACAATACCAACAGTGAATAAGATATaGGCTTGCCCACATGGTCTGGCCCGAATTACCTCA +
Preference number: 6 (lower is better)
Translates to: VVNTTIPTVNKI*ACPHGLARITS
Trigger: TGAGGTAATTCGGGCCAGACCATGTGGGCAAGCCAATATCTTATTCACTGTTGGTATTGTTGTATTAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461353.1
CDS TCA 72 bp AGCAATATCTTATTTAAGGACACTCAGGATTCAAGCTaGGAGAACAAACCGCAAAGGTCAGTTATAGGAACA +
Preference number: 6 (lower is better)
Translates to: SNILFKDTQDSS*ENKPQRSVIGT
Trigger: TGTTCCTATAACTGACCTTTGCGGTTTGTTCTCTCAGCTTGAATCCTGAGTGTCCTTAAATAAGATATTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488681.1