RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000170291

Ensembl transcript IDs: ENST00000354429.6, ENST00000356683.6, ENST00000396627.6, ENST00000396628.6, ENST00000570322.5, ENST00000570500.5, ENST00000571146.2, ENST00000572104.2, ENST00000573513.5, ENST00000573657.5, ENST00000573699.5, ENST00000574255.5, ENST00000574993.5, ENST00000576496.5, ENST00000671820.1, ENST00000671829.1, ENST00000671885.1, ENST00000672061.1, ENST00000672410.1, ENST00000672457.1, ENST00000672545.1, ENST00000673019.1, ENST00000673102.1, ENST00000673277.1, ENST00000673286.1, ENST00000673309.1, ENST00000673570.1, ENST00000673612.1

Found 746 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTAGGGCTGGGACTCTACAGAGGGCCCCTCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGAACCACTGAGTCTGGTCAGTTGGGC +
Preference number: 1 (lower is better)
Translates to: SRAGTLQRAPLGDPG*SPEGWRTTESGQLG
Trigger: GCCCAACTGACCAGACTCAGTGGTTCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAGAGGGGCCCTCTGTAGAGTCCCAGCCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR CCA 90 bp CAGGTCGTCATCTGGGTCTTCTTGGTCCAGGTCATCATAAGCATCTaGCTCATAGAAGATGTGGCTGGTAGCCTGCCCTGGCCTAGGCCG +
Preference number: 1 (lower is better)
Translates to: QVVIWVFLVQVIISI*LIEDVAGSLPWPRP
Trigger: CGGCCTAGGCCAGGGCAGGCTACCAGCCACATCTTCTATGAGCCAGATGCTTATGATGACCTGGACCAAGAAGACCCAGATGACGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CCA 90 bp ATCATAAGCATCTGGCTCATAGAAGATGTGGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGCCTGCTGTCTGAGAAGGGAAGATTT +
Preference number: 1 (lower is better)
Translates to: IISIWLIEDVAGSLP*PRPQESLLSEKGRF
Trigger: AAATCTTCCCTTCTCAGACAGCAGGCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACATCTTCTATGAGCCAGATGCTTATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CCA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATC +
Preference number: 1 (lower is better)
Translates to: RWGRDRVRLTQTIER*FWAQSLPAPPPITI
Trigger: GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
3UTR TCA 90 bp ACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTaGACTGGAAGGGCAGGATCAGGCTATCTCTGGCTTCTCTCTCTT +
Preference number: 1 (lower is better)
Translates to: TQGSTYPGPNLTFQN*TGRAGSGYLWLLSL
Trigger: AAGAGAGAGAAGCCAGAGATAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
3UTR CCA 90 bp CCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTaGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGGTCCA +
Preference number: 1 (lower is better)
Translates to: PKVFPRPLQLQSNQI*PVKYPGRHLGLLGP
Trigger: TGGACCAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
3UTR CCA 90 bp TACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTCATCATAAGCATCTGGCTCATAGAA +
Preference number: 1 (lower is better)
Translates to: YNLIKSGQSNIQVVI*VFLVQVIISIWLIE
Trigger: TTCTATGAGCCAGATGCTTATGATGACCTGGACCAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
3UTR-3UTR TCA 90 bp GTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 2 (lower is better)
Translates to: VSWALSGPPTQDVGRGLARVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...GGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR CCA 90 bp GGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCCATGGTAAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 2 (lower is better)
Translates to: GRCRGLRHRMWAEAWPMVSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...TACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR GCA 90 bp GTGGGCCGAGGCCTGGCCCATGGTACCGCCCAGGGTCACCTCAGTCTGAGCAAGTGTAGGTACAAAGGATaGTGCCACTCTGCCCCATCC +
Preference number: 2 (lower is better)
Translates to: VGRGLAHGTAQGHLSLSKCRYKG*CHSAPS
Trigger: GGATGGGGCAGAGTGGCAGCATCCTTTGTACCTACA...CTTGCTCAGACTGAGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR TCA 90 bp TCTGGTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCTGT +
Preference number: 2 (lower is better)
Translates to: SGQLGAVGASDTGCGPRPRLKVK*VVGSTC
Trigger: ACAGGTGGATCCCACAACTCATTTGACCTTTAACCT...AGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR TCA 90 bp GCTGAAGTCCGGAAGGATGGAGAACCACTGAGTCTGGTCAGTTGGGCGCTGTCGAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 2 (lower is better)
Translates to: AEVRKDGEPLSLVSWALSRVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...CGACAGCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCTTCCGGACTTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR CCA 90 bp AGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 2 (lower is better)
Translates to: RDPRTQVPTLLFRTELEGMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...CCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR CCA 90 bp CTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 2 (lower is better)
Translates to: LRDPRTQVPTLLFRTELEMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...TTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR CCA 90 bp GTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 2 (lower is better)
Translates to: VPRSQPYFSELNWKGRIRLRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...CCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR CAA 90 bp CCTGGCCTAGGCCGCAGGAGAGCCTGCTGTCTGAGAAGGGAAGATTaGGTGCTGGTGAGGGTAGCTAACAGGTTGGGTCTGGATACTTTC +
Preference number: 2 (lower is better)
Translates to: PGLGRRRACCLRRED*VLVRVANRLGLDTF
Trigger: GAAAGTATCCAGACCCAACCTGTTAGCTACCCTCACCAGCACCAAATCTTCCCTTCTCAGACAGCAGGCTCTCCTGCGGCCTAGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR GCA 90 bp ATACCGGGGGTATATGAGGATCGGAGTAGGGCTGGGACTCTACAGAGGGCCCCTTGTAGGTACAAAGGATaGTGCCACTCTGCCCCATCC +
Preference number: 2 (lower is better)
Translates to: IPGVYEDRSRAGTLQRAPCRYKG*CHSAPS
Trigger: GGATGGGGCAGAGTGGCAGCATCCTTTGTACCTACA...AGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATATACCCCCGGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR GCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGATCTCCATGGCCCAGATaGTGGGATCTACTCAGGGAT +
Preference number: 2 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRSPWPR*WDLLRD
Trigger: ATCCCTGAGTAGATCCCAGCATCTGGGCCATGGAGA...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp CACCACTGCCTAGGGATAGGGCCACCTCCCAAGGGTCTGGTCTGGCTCAGCCCATTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 2 (lower is better)
Translates to: HHCLGIGPPPKGLVWLSPFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...TGGGCTGAGCCAGACCAGACCCTTGGGAGGTGGCCCTATCCCTAGGCAGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CAA 90 bp TCCGCCCACATACTGGGCACAGAACAGCAAGCGTGTACTAAGCCCTaGTTAACCAGCCTCTGCCACGCCCATATAGCCTTCTGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: SAHILGTEQQACTKP*LTSLCHAHIAFCPP
Trigger: AGGAGGACAGAAGGCTATATGGGCGTGGCAGAGGCTGGTTAACAAGGGCTTAGTACACGCTTGCTGTTCTGTGCCCAGTATGTGGGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR GCA 90 bp GAAGATTTGGTGCTGGTGAGGGTAGCTAACAGGTTGGGTCTGGATACTTTCTTCAGCCCAGGCCCAGGGTaGTCTGGGGACAACTGGAGC +
Preference number: 2 (lower is better)
Translates to: EDLVLVRVANRLGLDTFFSPGPG*SGDNWS
Trigger: GCTCCAGTTGTCCCCAGAGCACCCTGGGCCTGGGCT...GAAGAAAGTATCCAGACCCAACCTGTTAGCTACCCTCACCAGCACCAAATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp TACCGGGGGTATATGAGGATCGGAGTAGGGCTGGGACTCTACAGAGGGCCCCTCTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 2 (lower is better)
Translates to: YRGYMRIGVGLGLYRGPLFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...GAGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATATACCCCCGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR TCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAAAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCTGT +
Preference number: 2 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGERLKVK*VVGSTC
Trigger: ACAGGTGGATCCCACAACTCATTTGACCTTTAACCT...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR TCA 90 bp CCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTACTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 2 (lower is better)
Translates to: PRSQPYFSELNWKGRIRLLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR GCA 90 bp TACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAGGATGCTGCCACTCTaGCCCATCCCTAGAATCCCT +
Preference number: 2 (lower is better)
Translates to: YSGIHVPRSQPYFSELNWRMLPL*PIPRIP
Trigger: AGGGATTCTAGGGATGGGGCAGAGTGGCAGCATCCT...CCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR GCA 90 bp CCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTAAGGTACAAAGGATGCTaGCACTCTGCCCCATCCCTA +
Preference number: 2 (lower is better)
Translates to: PRSQPYFSELNWKGRIRLRYKGC*HSAPSL
Trigger: TAGGGATGGGGCAGAGTGGCAGCATCCTTTGTACCT...TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR CCA 90 bp CCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTAGGTGGATCAAGAACTTaGACTTGTCTCTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: PRSQPYFSELNWKGRIRLGGSRT*TCLWRW
Trigger: CCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACC...TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp GTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGGGTGGATCAAGAACTTaGACTTGTCTCTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: VPRSQPYFSELNWKGRIRGGSRT*TCLWRW
Trigger: CCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACC...CCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp CCGCAGGAGAGCCTGCTGTCTGAGAAGGGAAGATTTGGTGCTGGTGAGGGTAGCTCCATGTCATTTTATTaGTCCAAGTCCCTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: PQESLLSEKGRFGAGEGSSMSFY*SKSLSL
Trigger: CAGAGAAAGGGACTTGGACCAATAAAATGACATGGA...GCTACCCTCACCAGCACCAAATCTTCCCTTCTCAGACAGCAGGCTCTCCTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTT +
Preference number: 2 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRQTIER*FWAQSL
Trigger: AAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTG...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
3UTR-3UTR TCA 90 bp GGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGGAGAGCCTGCTGTCTaGGAAGGGAAGATTTGGTGC +
Preference number: 2 (lower is better)
Translates to: GVLLSHITPCLHPTFCPDGEPAV*EGKIWC
Trigger: GCACCAAATCTTCCCTTCTCAGACAGCAGGCTCTCC...ATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR GCA 90 bp TCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCTTTGTAGGTACAAAGGATaGTGCCACTCTGCCCCATCC +
Preference number: 2 (lower is better)
Translates to: SHITPCLHPTFCPDETLLCRYKG*CHSAPS
Trigger: GGATGGGGCAGAGTGGCAGCATCCTTTGTACCTACA...AAGCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR GCA 90 bp CCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTAGACATAAAGGTCCTCTaGCATTATAGGGGGAATGGG +
Preference number: 2 (lower is better)
Translates to: PRSQPYFSELNWKGRIRLDIKVL*HYRGNG
Trigger: CCCATTCCCCCTATAATGGCAGAGGACCTTTATGTC...TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CAA 90 bp TGTCTGAGAAGGGAAGATTTGGTGCTGGTGAGGGTAGCTAACAGGTaGGGTCTGGATACTTTCTTCCAGGTGACTGTGACTCTCATTCAG +
Preference number: 2 (lower is better)
Translates to: CLRREDLVLVRVANR*GLDTFFQVTVTLIQ
Trigger: CTGAATGAGAGTCACAGTCACCTGGAAGAAAGTATCCAGACCCAACCTGTTAGCTACCCTCACCAGCACCAAATCTTCCCTTCTCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR TCA 90 bp ACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCTGT +
Preference number: 2 (lower is better)
Translates to: TQVPTLLFRTELEGQDQARLKVK*VVGSTC
Trigger: ACAGGTGGATCCCACAACTCATTTGACCTTTAACCT...AGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp AGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 2 (lower is better)
Translates to: RDPRTQVPTLLFRTELEGFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...CCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp GTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGTATAGGGGGAATGGGTaGATCAAGAACTTGGACTTG +
Preference number: 2 (lower is better)
Translates to: VPRSQPYFSELNWKGRIRYRGNG*IKNLDL
Trigger: CAAGTCCAAGTTCTTGATCCACCCATTCCCCCTATA...CCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CAA 90 bp GTCCTCTGCCATTATAGGGGGAATGGGTGGATCAAGAACTTGGACTaGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATC +
Preference number: 2 (lower is better)
Translates to: VLCHYRGNGWIKNLD*SLEVDFSPYKVRLI
Trigger: GATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCATTCCCCCTATAATGGCAGAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CAA 90 bp ATAAAGGTCCTCTGCCATTATAGGGGGAATGGGTGGATCAAGAACTaGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGG +
Preference number: 2 (lower is better)
Translates to: IKVLCHYRGNGWIKN*DLSLEVDFSPYKVR
Trigger: CCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCATTCCCCCTATAATGGCAGAGGACCTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR TCA 90 bp GGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCTGT +
Preference number: 2 (lower is better)
Translates to: GVFYSLTLPHVFILPSVLRLKVK*VVGSTC
Trigger: ACAGGTGGATCCCACAACTCATTTGACCTTTAACCT...CAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR TCA 90 bp AGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCTGT +
Preference number: 2 (lower is better)
Translates to: RYGGVLLSHITPCLHPTFRLKVK*VVGSTC
Trigger: ACAGGTGGATCCCACAACTCATTTGACCTTTAACCT...GAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR GCA 90 bp AAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTATGTAGGTACAAAGGATaGTGCCACTCTGCCCCATCC +
Preference number: 2 (lower is better)
Translates to: KNLDLSLEVDFSPYKVRLCRYKG*CHSAPS
Trigger: GGATGGGGCAGAGTGGCAGCATCCTTTGTACCTACA...TAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR GCA 90 bp GACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCTGTAGGTACAAAGGATaGTGCCACTCTGCCCCATCC +
Preference number: 2 (lower is better)
Translates to: DFSPYKVRLINNLLPQPLCRYKG*CHSAPS
Trigger: GGATGGGGCAGAGTGGCAGCATCCTTTGTACCTACA...GAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp GGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTACTTGTCTCTGGAGGTaGACTTCAGTCCCTATAAAG +
Preference number: 2 (lower is better)
Translates to: GTGVFYSLTLPHVFILPSTCLWR*TSVPIK
Trigger: CTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGT...AGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp TTCAGGCAACCTGTTAGGCCTCCATGTCATTTTATTGGTCCAAGTCCCTTTCTCACTTGGACTTGTCTCTaGAGGTGGACTTCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: FRQPVRPPCHFIGPSPFLTWTCL*RWTSVP
Trigger: AGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGT...GAGAAAGGGACTTGGACCAATAAAATGACATGGAGGCCTAACAGGTTGCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp TTTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTC +
Preference number: 2 (lower is better)
Translates to: FIRYGGVLLSHITPCLHPIQVVI*VFLVQV
Trigger: GACCTGGACCAAGAAGACCCAGATGACGACCTGGAT...AGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
3UTR CAA 90 bp TGTGACTCTCATTCAGGCAACCTGTTAGGCCTCCATGTCATTTTATaGGTCCAAGTCCCTTTCTCTGACCTCCATGTTAGAGCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: CDSHSGNLLGLHVIL*VQVPFSDLHVRAEA
Trigger: TGCTTCAGCTCTAACATGGAGGTCAGAGAAAGGGACTTGGACCAATAAAATGACATGGAGGCCTAACAGGTTGCCTGAATGAGAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR GCA 90 bp TTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATTCTCCATGGCCCAGATaGTGGGATCTACTCAGGGAT +
Preference number: 2 (lower is better)
Translates to: LDLSLEVDFSPYKVRLINSPWPR*WDLLRD
Trigger: ATCCCTGAGTAGATCCCAGCATCTGGGCCATGGAGA...ATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp GAAGATTTGGTGCTGGTGAGGGTAGCTAACAGGTTGGGTCTGGATACTTTCTTCTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 2 (lower is better)
Translates to: EDLVLVRVANRLGLDTFFFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...GAAGAAAGTATCCAGACCCAACCTGTTAGCTACCCTCACCAGCACCAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp GGAGAGAAAAGAGACATAAAGGTCCTCTGCCATTATAGGGGGAATGGGTGGATCTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 2 (lower is better)
Translates to: GEKRDIKVLCHYRGNGWIFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...GATCCACCCATTCCCCCTATAATGGCAGAGGACCTTTATGTCTCTTTTCTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp GGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCATCATAAGCATCTaGCTCATAGAAGATGTGGCT +
Preference number: 2 (lower is better)
Translates to: GTGVFYSLTLPHVFILPSVIISI*LIEDVA
Trigger: AGCCACATCTTCTATGAGCCAGATGCTTATGATGAC...AGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
3UTR-3UTR TCA 90 bp AGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGTTATTTTCTCTCCCGTaGCCAGATACTAAACTACAT +
Preference number: 2 (lower is better)
Translates to: RDPRTQVPTLLFRTELEGLFSLP*PDTKLH
Trigger: ATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAA...CCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR TCA 90 bp ACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTTTATTTTCTCTCCCGTaGCCAGATACTAAACTACAT +
Preference number: 2 (lower is better)
Translates to: TQVPTLLFRTELEGQDQALFSLP*PDTKLH
Trigger: ATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAA...AGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR-3UTR GCA 90 bp TTTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTGACATAAAGGTCCTCTaGCATTATAGGGGGAATGGG +
Preference number: 2 (lower is better)
Translates to: FIRYGGVLLSHITPCLHPDIKVL*HYRGNG
Trigger: CCCATTCCCCCTATAATGGCAGAGGACCTTTATGTC...AGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CCA 90 bp TTTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTCAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTT +
Preference number: 2 (lower is better)
Translates to: FIRYGGVLLSHITPCLHPQTIER*FWAQSL
Trigger: AAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTG...AGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
3UTR CCA 72 bp TCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATGGTACCGCCCAGGGTC +
Preference number: 3 (lower is better)
Translates to: SVGRCRGLRHRM*AEAWPMVPPRV
Trigger: GACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR GCA 72 bp CCCAAGGGTCTGGTCTGGCTCAGCCCAGGCCCAGGGTaGTCTGGGGACAACTGGAGCTGTGACCCAAGGGTA +
Preference number: 3 (lower is better)
Translates to: PKGLVWLSPGPG*SGDNWSCDPRV
Trigger: TACCCTTGGGTCACAGCTCCAGTTGTCCCCAGAGCACCCTGGGCCTGGGCTGAGCCAGACCAGACCCTTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CCA 72 bp ATCTGGCTCATAGAAGATGTGGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGCCTGCTGTCTGAGAAG +
Preference number: 3 (lower is better)
Translates to: IWLIEDVAGSLP*PRPQESLLSEK
Trigger: CTTCTCAGACAGCAGGCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACATCTTCTATGAGCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR TCA 72 bp GGGACTCTACAGAGGGCCCCTCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGAACCACTGAGTCTGGT +
Preference number: 3 (lower is better)
Translates to: GTLQRAPLGDPG*SPEGWRTTESG
Trigger: ACCAGACTCAGTGGTTCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAGAGGGGCCCTCTGTAGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
3UTR GCA 72 bp CAGCAAGCGTGTACTAAGCCCTTGTTAACCAGCCTCTaGCACGCCCATATAGCCTTCTGTCCTCCTAGCACC +
Preference number: 3 (lower is better)
Translates to: QQACTKPLLTSL*HAHIAFCPPST
Trigger: GGTGCTAGGAGGACAGAAGGCTATATGGGCGTGGCAGAGGCTGGTTAACAAGGGCTTAGTACACGCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CAA 90 bp CCGCAGGAGAGCCTGCTGTCTGAGAAGGGAAGATTTGGTGCTGGTGAGGGTAGCATCAAGAACTTGGACTaGTCTCTGGAGGTGGACTTC +
Preference number: 3 (lower is better)
Translates to: PQESLLSEKGRFGAGEGSIKNLD*SLEVDF
Trigger: GAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT...GCTACCCTCACCAGCACCAAATCTTCCCTTCTCAGACAGCAGGCTCTCCTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR GCA 72 bp CATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTaGTTCCTGGCTCACAAGGCGGGGCTCCATAGACAA +
Preference number: 3 (lower is better)
Translates to: HVFILPSVLMRR*FLAHKAGLHRQ
Trigger: TTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
3UTR-3UTR CAA 90 bp ACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTGGGTGGATCAAGAACTaGGACTTGTCTCTGGAGGTG +
Preference number: 3 (lower is better)
Translates to: TQVPTLLFRTELEGQDQAGWIKN*DLSLEV
Trigger: CACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC...AGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR TCA 72 bp TCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTaGACTGGAAGGGCAGGATCAGGCTATCTCTGGCTT +
Preference number: 3 (lower is better)
Translates to: STYPGPNLTFQN*TGRAGSGYLWL
Trigger: AAGCCAGAGATAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
3UTR CCA 72 bp AAGGATCTTGTAGTCTTGCGTCATCCGCCCACATACTaGGCACAGAACAGCAAGCGTGTACTAAGCCCTTGT +
Preference number: 3 (lower is better)
Translates to: KDLVVLRHPPTY*AQNSKRVLSPC
Trigger: ACAAGGGCTTAGTACACGCTTGCTGTTCTGTGCCCAGTATGTGGGCGGATGACGCAAGACTACAAGATCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CAA 90 bp TCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCTTGGGTGGATCAAGAACTaGGACTTGTCTCTGGAGGTG +
Preference number: 3 (lower is better)
Translates to: SHITPCLHPTFCPDETLLGWIKN*DLSLEV
Trigger: CACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC...AAGCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CCA 72 bp AGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTaGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACA +
Preference number: 3 (lower is better)
Translates to: RVRLTQTIERWF*AQSLPAPPPIT
Trigger: TGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
3UTR-3UTR CAA 90 bp GGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTAGGGTAGCTAACAGGTaGGGTCTGGATACTTTCTTC +
Preference number: 3 (lower is better)
Translates to: GTGVFYSLTLPHVFILPSRVANR*GLDTFF
Trigger: GAAGAAAGTATCCAGACCCAACCTGTTAGCTACCCT...AGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CCA 72 bp TCTGCCATTATAGGGGGAATGGGTGGATCAAGAACTTaGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATA +
Preference number: 3 (lower is better)
Translates to: SAIIGGMGGSRT*TCLWRWTSVPI
Trigger: TATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCATTCCCCCTATAATGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CCA 72 bp TTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTaGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTT +
Preference number: 3 (lower is better)
Translates to: FPRPLQLQSNQI*PVKYPGRHLGL
Trigger: AAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
3UTR-3UTR CAA 90 bp GAAGATTTGGTGCTGGTGAGGGTAGCTAACAGGTTGGGTCTGGATACTTTCTTCTTAATCAATAACCTGTaGCCCCAACCTCTCCATGGC +
Preference number: 3 (lower is better)
Translates to: EDLVLVRVANRLGLDTFFLINNL*PQPLHG
Trigger: GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAA...GAAGAAAGTATCCAGACCCAACCTGTTAGCTACCCTCACCAGCACCAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR-3UTR CAA 90 bp TTGGGTCTGGATACTTTCTTCCAGGTGACTGTGACTCTCATTCAGGCAACCTGTTTAATCAATAACCTGTaGCCCCAACCTCTCCATGGC +
Preference number: 3 (lower is better)
Translates to: LGLDTFFQVTVTLIQATCLINNL*PQPLHG
Trigger: GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAA...ACAGGTTGCCTGAATGAGAGTCACAGTCACCTGGAAGAAAGTATCCAGACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CCA 72 bp ATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTCATCATAAGCATCTGG +
Preference number: 3 (lower is better)
Translates to: IKSGQSNIQVVI*VFLVQVIISIW
Trigger: CCAGATGCTTATGATGACCTGGACCAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR CCA 90 bp GTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCCCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: VSWALSGPPTQDVGRGLAPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...GGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CCA 90 bp GGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCCATGGTACCGCCCAGGGTCCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: GPPTQDVGRGLAHGTAQGPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...ACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CCA 90 bp GTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VSWALSGPPTQDVGRGLAMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...GGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp GGTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCGCGCCTTCAAGAGACTaGGCCCCTCCCACTCCACGG +
Preference number: 4 (lower is better)
Translates to: GQLGAVGASDTGCGPRPGAPSRD*APPTPR
Trigger: CCGTGGAGTGGGAGGGGCGCAGTCTCTTGAAGGCGC...GCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CCA 90 bp GCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCCATGGTACCGCCTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: AVGASDTGCGPRPGPWYRLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...GCGGTACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CCA 90 bp TCTGGTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTCTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: SGQLGAVGASDTGCGPRPLRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...AGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR TCA 90 bp GGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCCATGGTAAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: GRCRGLRHRMWAEAWPMVRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...TACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp GTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCCCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: VSWALSGPPTQDVGRGLAPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...GGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp CACCACTGCCTAGGGATAGGGCCACCTCCCAAGGGTCTGGTCTGGCTCAGCCCAATGTGGCTGGTAGCCTaGCCTGGCCTAGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: HHCLGIGPPPKGLVWLSPMWLVA*PGLGRR
Trigger: CCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACAT...TGGGCTGAGCCAGACCAGACCCTTGGGAGGTGGCCCTATCCCTAGGCAGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCCATGGTACCGCGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: AVGASDTGCGPRPGPWYRGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...GCGGTACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR TCA 90 bp GTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VSWALSGPPTQDVGRGLAGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...GGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp GGTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCTCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: GQLGAVGASDTGCGPRPGSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...GCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp GGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCCATGGTACAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GRCRGLRHRMWAEAWPMVQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...TACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp GGTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GQLGAVGASDTGCGPRPGQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...GCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CCA 90 bp CCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCACCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: PTFCPDETLLPGSQGGAPPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...TGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACCTTCCTCCTCGGGGTaGAACGGGCCGAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGEPSSSG*NGPSTR
Trigger: CCGAGTGCTCGGCCCGTTTCACCCCGAGGAGGAAGG...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATCCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: ILPSVLMRRCFLAHKAGLPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...GAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACCAATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MRRCFLAHKAGLHRQGEPMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...TGGTTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGAGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRAGSLP*PRPQES
Trigger: GCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGC...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACCCCTCCCCGAGCCCTaGCGCACAGTCGTACGGACA +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGEPLPEP*RTVVRT
Trigger: TGTCCGTACGACTGTGCGCCAGGGCTCGGGGAGGGG...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000673019.1
CDS-3UTR CCA 90 bp GTGGGCCGAGGCCTGGCCCATGGTACCGCCCAGGGTCACCTCAGTCTGAGCAAGTCACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: VGRGLAHGTAQGHLSLSKSPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTGA...CTTGCTCAGACTGAGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp TCTGGTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTCCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SGQLGAVGASDTGCGPRPPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...AGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp ATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACCAATGTGGCTGGTAGCCTaGCCTGGCCTAGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: MRRCFLAHKAGLHRQGEPMWLVA*PGLGRR
Trigger: CCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACAT...TGGTTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAAATGTGGCTGGTAGCCTaGCCTGGCCTAGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGEMWLVA*PGLGRR
Trigger: CCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACAT...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATGGGGCAGTTGTCAGTaGGAGGGGGAGGAGGACCCA +
Preference number: 4 (lower is better)
Translates to: PTFCPDETLLPGSQGGAPWGSCQ*EGEEDP
Trigger: TGGGTCCTCCTCCCCCTCCCACTGACAACTGCCCCA...TGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000396627.6
ENST00000672545.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAACCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: SVLMRRCFLAHKAGLHRQPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...TTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGELRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACCACTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: MRRCFLAHKAGLHRQGEPLRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...TGGTTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRLRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATCCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ILPSVLMRRCFLAHKAGLLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...GAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CCGCAGGAGAGCCTGCTGTCTGAGAAGGGAAGATTTGGTGCTGGTGAGGGTAGCCTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: PQESLLSEKGRFGAGEGSLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...GCTACCCTCACCAGCACCAAATCTTCCCTTCTCAGACAGCAGGCTCTCCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp ATCCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCTGCTCTGGCGCCCTCTaGTGGCGTCATGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: ILPSVLMRRCFLAHKAGLCSGAL*WRHDPV
Trigger: CACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCA...GAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CACCACTGCCTAGGGATAGGGCCACCTCCCAAGGGTCTGGTCTGGCTCAGCCCACTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: HHCLGIGPPPKGLVWLSPLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...TGGGCTGAGCCAGACCAGACCCTTGGGAGGTGGCCCTATCCCTAGGCAGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCCATGGTAAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCTGT +
Preference number: 4 (lower is better)
Translates to: GRCRGLRHRMWAEAWPMVRLKVK*VVGSTC
Trigger: ACAGGTGGATCCCACAACTCATTTGACCTTTAACCT...TACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp ACACAGGATGTGGGCCGAGGCCTGGCCCATGGTACCGCCCAGGGTCACCTCAGTCCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TQDVGRGLAHGTAQGHLSPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...ACTGAGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp GCCCATGGTACCGCCCAGGGTCACCTCAGTCTGAGCAAGGCTGCTGAGAGCTCCAGGATGCTGCCACTCTaGCCCATCCCTAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: AHGTAQGHLSLSKAAESSRMLPL*PIPRIP
Trigger: AGGGATTCTAGGGATGGGGCAGAGTGGCAGCATCCT...GGAGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCTGGGCGGTACCATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp ACACAGGATGTGGGCCGAGGCCTGGCCCATGGTACCGCCCAGGGTCACCTCAGTAGGTACAAAGGATGCTaGCACTCTGCCCCATCCCTA +
Preference number: 4 (lower is better)
Translates to: TQDVGRGLAHGTAQGHLSRYKGC*HSAPSL
Trigger: TAGGGATGGGGCAGAGTGGCAGCATCCTTTGTACCT...ACTGAGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CCA 90 bp TCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAACTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SVLMRRCFLAHKAGLHRQLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...TTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCCCTTCCTCCTCGGGGTaGAACGGGCCGAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: ANTNNRKMVLGPKSSRAPPSSSG*NGPSTR
Trigger: CCGAGTGCTCGGCCCGTTTCACCCCGAGGAGGAAGG...GGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CACCACTGCCTAGGGATAGGGCCACCTCCCAAGGGTCTGGTCTGGCTCAGCCCAGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: HHCLGIGPPPKGLVWLSPGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...TGGGCTGAGCCAGACCAGACCCTTGGGAGGTGGCCCTATCCCTAGGCAGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CACCACTGCCTAGGGATAGGGCCACCTCCCAAGGGTCTGGTCTGGCTCAGCCCAGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: HHCLGIGPPPKGLVWLSPEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...TGGGCTGAGCCAGACCAGACCCTTGGGAGGTGGCCCTATCCCTAGGCAGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TACCGGGGGTATATGAGGATCGGAGTAGGGCTGGGACTCTACAGAGGGCCCCTCAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: YRGYMRIGVGLGLYRGPLRVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...GAGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATATACCCCCGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR TCA 90 bp CCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCAAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: PTFCPDETLLPGSQGGAPRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...TGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CACCACTGCCTAGGGATAGGGCCACCTCCCAAGGGTCTGGTCTGGCTCAGCCCACCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: HHCLGIGPPPKGLVWLSPPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...TGGGCTGAGCCAGACCAGACCCTTGGGAGGTGGCCCTATCCCTAGGCAGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp CCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCACCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: PTFCPDETLLPGSQGGAPPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...TGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GCCCATGGTACCGCCCAGGGTCACCTCAGTCTGAGCAAGGCTGCTGAGAGCTCCTGTAGGTACAAAGGATaGTGCCACTCTGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: AHGTAQGHLSLSKAAESSCRYKG*CHSAPS
Trigger: GGATGGGGCAGAGTGGCAGCATCCTTTGTACCTACA...GGAGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCTGGGCGGTACCATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CCA 90 bp CCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCAACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PTFCPDETLLPGSQGGAPTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...TGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTACCTTCCTCCTCGGGGTaGAACGGGCCGAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: PRSQPYFSELNWKGRIRLPSSSG*NGPSTR
Trigger: CCGAGTGCTCGGCCCGTTTCACCCCGAGGAGGAAGG...TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGACCTTCCTCCTCGGGGTaGAACGGGCCGAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: CWDLLRDPRTQVPTLLFRPSSSG*NGPSTR
Trigger: CCGAGTGCTCGGCCCGTTTCACCCCGAGGAGGAAGG...TCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCCATGGTACCGCAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: AVGASDTGCGPRPGPWYRKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...GCGGTACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR TCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAAAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGERVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACCAAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: MRRCFLAHKAGLHRQGEPRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...TGGTTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TCTCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: SPWPRCWDLLRDPRTQVPRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...TGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGAAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCGCGCCTTCAAGAGACTaGGCCCCTCCCACTCCACGG +
Preference number: 4 (lower is better)
Translates to: ANTNNRKMVLGPKSSRAPAPSRD*APPTPR
Trigger: CCGTGGAGTGGGAGGGGCGCAGTCTCTTGAAGGCGC...GGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GCCCAGGCCCAGGGTGCTCTGGGGACAACTGGAGCTGTGACCCAAGGGTATAAGCAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: AQAQGALGTTGAVTQGYKQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...CTTATACCCTTGGGTCACAGCTCCAGTTGTCCCCAGAGCACCCTGGGCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCAAGGATGCTGCCACTCTaGCCCATCCCTAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: PTFCPDETLLPGSQGGAPRMLPL*PIPRIP
Trigger: AGGGATTCTAGGGATGGGGCAGAGTGGCAGCATCCT...TGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp ATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACCAGTCCTGATGAGACGCTaGTTCCTGGCTCACAAGGCG +
Preference number: 4 (lower is better)
Translates to: MRRCFLAHKAGLHRQGEPVLMRR*FLAHKA
Trigger: CGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGAC...TGGTTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAAGTCCTGATGAGACGCTaGTTCCTGGCTCACAAGGCG +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGEVLMRR*FLAHKA
Trigger: CGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGAC...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TCTCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: SPWPRCWDLLRDPRTQVPGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...TGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGAGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACCAGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: MRRCFLAHKAGLHRQGEPGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...TGGTTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGAACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCCCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: GSGPKVFPRPLQLQSNQIPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...GATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IERWFWAQSLPAPPPITIMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TIERWFWAQSLPAPPPITMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...TGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: IERWFWAQSLPAPPPITIAGSLP*PRPQES
Trigger: GCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGC...GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: NNRKMVLGPKSSRAPSNYAGSLP*PRPQES
Trigger: GCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGC...GTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: WGRDRVRLTQTIERWFWAAGSLP*PRPQES
Trigger: GCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGC...GGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCCCCCTCCCCGAGCCCTaGCGCACAGTCGTACGGACA +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSPLPEP*RTVVRT
Trigger: TGTCCGTACGACTGTGCGCCAGGGCTCGGGGAGGGG...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAATCTACATTTTCACTGTaGCCGGGGCGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGESTFSL*PGREEQ
Trigger: CTGCTCTTCCCGCCCCGGTCACAGTGAAAATGTAGA...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACCATCTACATTTTCACTGTaGCCGGGGCGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: MRRCFLAHKAGLHRQGEPSTFSL*PGREEQ
Trigger: CTGCTCTTCCCGCCCCGGTCACAGTGAAAATGTAGA...TGGTTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAACCTTCCTCCTCGGGGTaGAACGGGCCGAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: GRDRVRLTQTIERWFWAQPSSSG*NGPSTR
Trigger: CCGAGTGCTCGGCCCGTTTCACCCCGAGGAGGAAGG...TTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGCCTTCCTCCTCGGGGTaGAACGGGCCGAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWPSSSG*NGPSTR
Trigger: CCGAGTGCTCGGCCCGTTTCACCCCGAGGAGGAAGG...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCTGCTCTGGCGCCCTCTaGTGGCGTCATGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGCSGAL*WRHDPV
Trigger: CACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCA...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTGCTCTGGCGCCCTCTaGTGGCGTCATGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: ANTNNRKMVLGPKSSRAPCSGAL*WRHDPV
Trigger: CACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCA...GGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCACCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PTFCPDETLLPGSQGGAPPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...TGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp AGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAAGCCCAGGCCCAGGGTaGTCTGGGGACAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: RKMVLGPKSSRAPSNYNLSPGPG*SGDNWS
Trigger: GCTCCAGTTGTCCCCAGAGCACCCTGGGCCTGGGCT...TAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp TGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCAGCCCAGGCCCAGGGTaGTCTGGGGACAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: WGRDRVRLTQTIERWFWASPGPG*SGDNWS
Trigger: GCTCCAGTTGTCCCCAGAGCACCCTGGGCCTGGGCT...GGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp GCCCAGGCCCAGGGTGCTCTGGGGACAACTGGAGCTGTGACCCAAGGGTATAAGTTGTTAACCAGCCTCTaGCACGCCCATATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: AQAQGALGTTGAVTQGYKLLTSL*HAHIAF
Trigger: GAAGGCTATATGGGCGTGGCAGAGGCTGGTTAACAA...CTTATACCCTTGGGTCACAGCTCCAGTTGTCCCCAGAGCACCCTGGGCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp AACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACATGTGGCTGGTAGCCTaGCCTGGCCTAGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: NNRKMVLGPKSSRAPSNYMWLVA*PGLGRR
Trigger: CCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACAT...GTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCTGGGGCAGTTGTCAGTaGGAGGGGGAGGAGGACCCA +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGWGSCQ*EGEEDP
Trigger: TGGGTCCTCCTCCCCCTCCCACTGACAACTGCCCCA...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000396627.6
ENST00000672545.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: SVLMRRCFLAHKAGLHRQGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...TTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: SMAQMLGSTQGSTYPGPNSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...GTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp ATCCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: ILPSVLMRRCFLAHKAGLSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...GAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTCCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: GTGVFYSLTLPHVFILPSPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...AGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAACCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: GRDRVRLTQTIERWFWAQPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...TTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCCTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: GSGPKVFPRPLQLQSNQILRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...GATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTACTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: RKMVLGPKSSRAPSNYNLLRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...TAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPLRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCACTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: GQGQGKANTNNRKMVLGPLRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...TGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACACTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: TIERWFWAQSLPAPPPITLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...TGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTACTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: RKMVLGPKSSRAPSNYNLLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...TAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: VPRSQPYFSELNWKGRIRLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...CCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: RDPRTQVPTLLFRTELEGLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...CCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCCTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TCTCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCATGCTCTGGGGACAACTaGAGCTGTGACCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: SPWPRCWDLLRDPRTQVPCSGDN*SCDPRV
Trigger: TACCCTTGGGTCACAGCTCCAGTTGTCCCCAGAGCA...TGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp ACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTCACCTCCCAAGGGTCTaGTCTGGCTCAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TQVPTLLFRTELEGQDQAHLPRV*SGSAQA
Trigger: GGCCTGGGCTGAGCCAGACCAGACCCTTGGGAGGTG...AGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACATCCGCCCACATACTaGGCACAGAACAGCAAGCGT +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGEHPPTY*AQNSKR
Trigger: ACGCTTGCTGTTCTGTGCCCAGTATGTGGGCGGATG...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCAGSLP*PRPQES
Trigger: GCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGC...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KDGSGPKVFPRPLQLQSNAGSLP*PRPQES
Trigger: GCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGC...ATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GCCCAGGCCCAGGGTGCTCTGGGGACAACTGGAGCTGTGACCCAAGGGTATAAGATAGAAAGATGGTTCTaGGCCCAAAGTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: AQAQGALGTTGAVTQGYKIERWF*AQSLPA
Trigger: CGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT...CTTATACCCTTGGGTCACAGCTCCAGTTGTCCCCAGAGCACCCTGGGCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CAA 72 bp GGCCGCAGGAGAGCCTGCTGTCTGAGAAGGGAAGATTaGGTGCTGGTGAGGGTAGCTAACAGGTTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GRRRACCLRRED*VLVRVANRLGL
Trigger: CAGACCCAACCTGTTAGCTACCCTCACCAGCACCAAATCTTCCCTTCTCAGACAGCAGGCTCTCCTGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAATCTACATTTTCACTGTaGCCGGGGCGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SVLMRRCFLAHKAGLHRQSTFSL*PGREEQ
Trigger: CTGCTCTTCCCGCCCCGGTCACAGTGAAAATGTAGA...TTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCCCTTCCTCCTCGGGGTaGAACGGGCCGAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTPSSSG*NGPSTR
Trigger: CCGAGTGCTCGGCCCGTTTCACCCCGAGGAGGAAGG...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCCCTTCCTCCTCGGGGTaGAACGGGCCGAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: YSLTLPHVFILPSVLMRRPSSSG*NGPSTR
Trigger: CCGAGTGCTCGGCCCGTTTCACCCCGAGGAGGAAGG...GCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTATGCTCTGGCGCCCTCTaGTGGCGTCATGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: PRSQPYFSELNWKGRIRLCSGAL*WRHDPV
Trigger: CACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCA...TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCTGCTCTGGCGCCCTCTaGTGGCGTCATGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPCSGAL*WRHDPV
Trigger: CACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCA...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GCTGAAGTCCGGAAGGATGGAGAACCACTGAGTCTGGTCAGTTGGGCGCTGTCGGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: AEVRKDGEPLSLVSWALSEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...CGACAGCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCTTCCGGACTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR TCA 90 bp TCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: SMAQMLGSTQGSTYPGPNEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...GTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGAGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHREVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TATGAGGATCGGAGTAGGGCTGGGACTCTACAGAGGGCCCCTCTTGGAGATCCACTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: YEDRSRAGTLQRAPLGDPLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...TGGATCTCCAAGAGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp CTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGGCGCCTTCAAGAGACTaGGCCCCTCCCACTCCACGG +
Preference number: 4 (lower is better)
Translates to: LSHITPCLHPTFCPDETLAPSRD*APPTPR
Trigger: CCGTGGAGTGGGAGGGGCGCAGTCTCTTGAAGGCGC...CAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: PTFCPDETLLPGSQGGAPLLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...TGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp ATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACCACCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: MRRCFLAHKAGLHRQGEPPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...TGGTTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGEQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GCTGAAGTCCGGAAGGATGGAGAACCACTGAGTCTGGTCAGTTGGGCGCTGTCGAGGTACAAAGGATGCTaGCACTCTGCCCCATCCCTA +
Preference number: 4 (lower is better)
Translates to: AEVRKDGEPLSLVSWALSRYKGC*HSAPSL
Trigger: TAGGGATGGGGCAGAGTGGCAGCATCCTTTGTACCT...CGACAGCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCTTCCGGACTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp ATCCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCTGTAGGTACAAAGGATaGTGCCACTCTGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: ILPSVLMRRCFLAHKAGLCRYKG*CHSAPS
Trigger: GGATGGGGCAGAGTGGCAGCATCCTTTGTACCTACA...GAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp TCTCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCATCTCCATGGCCCAGATaGTGGGATCTACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SPWPRCWDLLRDPRTQVPSPWPR*WDLLRD
Trigger: ATCCCTGAGTAGATCCCAGCATCTGGGCCATGGAGA...TGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp GCCCAGGCCCAGGGTGCTCTGGGGACAACTGGAGCTGTGACCCAAGGGTATAAGGACATAAAGGTCCTCTaGCATTATAGGGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: AQAQGALGTTGAVTQGYKDIKVL*HYRGNG
Trigger: CCCATTCCCCCTATAATGGCAGAGGACCTTTATGTC...CTTATACCCTTGGGTCACAGCTCCAGTTGTCCCCAGAGCACCCTGGGCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp GGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAATGTGGCTGGTAGCCTaGCCTGGCCTAGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRDRVRLTQTIERWFWAQMWLVA*PGLGRR
Trigger: CCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACAT...TTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGATGTGGCTGGTAGCCTaGCCTGGCCTAGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VRGCSTLSHYPMSSSYLLMWLVA*PGLGRR
Trigger: CCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACAT...CAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp AAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATATGTGGCTGGTAGCCTaGCCTGGCCTAGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: KDGSGPKVFPRPLQLQSNMWLVA*PGLGRR
Trigger: CCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACAT...ATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGGGGCAGTTGTCAGTaGGAGGGGGAGGAGGACCCA +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSWGSCQ*EGEEDP
Trigger: TGGGTCCTCCTCCCCCTCCCACTGACAACTGCCCCA...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000396627.6
ENST00000672545.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: TKVGQGQGKANTNNRKMVPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...AACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAACCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: GWIKNLDLSLEVDFSPYKPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...TTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTGGGTCTGGATACTTTCTTCCAGGTGACTGTGACTCTCATTCAGGCAACCTGTCCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: LGLDTFFQVTVTLIQATCPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...ACAGGTTGCCTGAATGAGAGTCACAGTCACCTGGAAGAAAGTATCCAGACCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp GGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAACTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: GRDRVRLTQTIERWFWAQLRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...TTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGCTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCCTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAACATCCGCCCACATACTaGGCACAGAACAGCAAGCGT +
Preference number: 4 (lower is better)
Translates to: SVLMRRCFLAHKAGLHRQHPPTY*AQNSKR
Trigger: ACGCTTGCTGTTCTGTGCCCAGTATGTGGGCGGATG...TTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCCCAGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PYKVRLINNLLPQPLHGPAGSLP*PRPQES
Trigger: GCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGC...TGGGCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp ACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TKVGQGQGKANTNNRKMVAGSLP*PRPQES
Trigger: GCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGC...AACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATCCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ILPSVLMRRCFLAHKAGLIQVVI*VFLVQV
Trigger: GACCTGGACCAAGAAGACCCAGATGACGACCTGGAT...GAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCCCCTCCCCGAGCCCTaGCGCACAGTCGTACGGACA +
Preference number: 4 (lower is better)
Translates to: TKVGQGQGKANTNNRKMVPLPEP*RTVVRT
Trigger: TGTCCGTACGACTGTGCGCCAGGGCTCGGGGAGGGG...AACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCCTTCCTCCTCGGGGTaGAACGGGCCGAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: LEVDFSPYKVRLINNLLPPSSSG*NGPSTR
Trigger: CCGAGTGCTCGGCCCGTTTCACCCCGAGGAGGAAGG...GGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGTGCTCTGGCGCCCTCTaGTGGCGTCATGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: LSHITPCLHPTFCPDETLCSGAL*WRHDPV
Trigger: CACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCA...CAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTGCTCTGGCGCCCTCTaGTGGCGTCATGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWCSGAL*WRHDPV
Trigger: CACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCA...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAATGCTCTGGCGCCCTCTaGTGGCGTCATGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: GRDRVRLTQTIERWFWAQCSGAL*WRHDPV
Trigger: CACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCA...TTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SVLMRRCFLAHKAGLHRQGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...TTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGAAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ATACCGGGGGTATATGAGGATCGGAGTAGGGCTGGGACTCTACAGAGGGCCCCTAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: IPGVYEDRSRAGTLQRAPNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...AGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATATACCCCCGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR TCA 90 bp ATCCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: ILPSVLMRRCFLAHKAGLNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...GAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: SMAQMLGSTQGSTYPGPNNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...GTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CAGGTCATCATAAGCATCTGGCTCATAGAAGATGTGGCTGGTAGCCTGCCCTGGAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: QVIISIWLIEDVAGSLPWRVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...CCAGGGCAGGCTACCAGCCACATCTTCTATGAGCCAGATGCTTATGATGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR TCA 90 bp GCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ANTNNRKMVLGPKSSRAPRVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...GGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TCTGGTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTTTATTTTCTCTCCCGTaGCCAGATACTAAACTACAT +
Preference number: 4 (lower is better)
Translates to: SGQLGAVGASDTGCGPRPLFSLP*PDTKLH
Trigger: ATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAA...AGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp TACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCGCGCCTTCAAGAGACTaGGCCCCTCCCACTCCACGG +
Preference number: 4 (lower is better)
Translates to: YSLTLPHVFILPSVLMRRAPSRD*APPTPR
Trigger: CCGTGGAGTGGGAGGGGCGCAGTCTCTTGAAGGCGC...GCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp AAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGCGCCTTCAAGAGACTaGGCCCCTCCCACTCCACGG +
Preference number: 4 (lower is better)
Translates to: KVGQGQGKANTNNRKMVLAPSRD*APPTPR
Trigger: CCGTGGAGTGGGAGGGGCGCAGTCTCTTGAAGGCGC...CAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GGAGAGAAAAGAGACATAAAGGTCCTCTGCCATTATAGGGGGAATGGGTGGATCAGCCCAGGCCCAGGGTaGTCTGGGGACAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: GEKRDIKVLCHYRGNGWISPGPG*SGDNWS
Trigger: GCTCCAGTTGTCCCCAGAGCACCCTGGGCCTGGGCT...GATCCACCCATTCCCCCTATAATGGCAGAGGACCTTTATGTCTCTTTTCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp TCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCTTAGCCCAGGCCCAGGGTaGTCTGGGGACAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: SHITPCLHPTFCPDETLLSPGPG*SGDNWS
Trigger: GCTCCAGTTGTCCCCAGAGCACCCTGGGCCTGGGCT...AAGCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCGTCCTGATGAGACGCTaGTTCCTGGCTCACAAGGCG +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGVLMRR*FLAHKA
Trigger: CGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGAC...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCGTCCTGATGAGACGCTaGTTCCTGGCTCACAAGGCG +
Preference number: 4 (lower is better)
Translates to: ANTNNRKMVLGPKSSRAPVLMRR*FLAHKA
Trigger: CGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGAC...GGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ANTNNRKMVLGPKSSRAPTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...GGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTCTTTCTTGGACAGGTGAAGGTTAAAGGTCAAATGAGTTGTGGGATCCACCTGATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LFLGQVKVKGQMSCGIHLMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...CAGGTGGATCCCACAACTCATTTGACCTTTAACCTTCACCTGTCCAAGAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPYKVRLINNLLPQPLHGMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QGKANTNNRKMVLGPKSSMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...GGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAACTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: GWIKNLDLSLEVDFSPYKLRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...TTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATCTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: NGWIKNLDLSLEVDFSPYLRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...ATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp ATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATACTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: MGGSRTWTCLWRWTSVPILSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...TATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATCTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: NGWIKNLDLSLEVDFSPYLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...ATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTGGGTCTGGATACTTTCTTCCAGGTGACTGTGACTCTCATTCAGGCAACCTGTCTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LGLDTFFQVTVTLIQATCLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...ACAGGTTGCCTGAATGAGAGTCACAGTCACCTGGAAGAAAGTATCCAGACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACACTTGGACTTGTCTCTaGAGGTGGACTTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SMAQMLGSTQGSTYPGPNTWTCL*RWTSVP
Trigger: AGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGT...GTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAAGGTGGATCAAGAACTTaGACTTGTCTCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGEGGSRT*TCLWRW
Trigger: CCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACC...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATCACCTCCCAAGGGTCTaGTCTGGCTCAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: NGWIKNLDLSLEVDFSPYHLPRV*SGSAQA
Trigger: GGCCTGGGCTGAGCCAGACCAGACCCTTGGGAGGTG...ATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCCCACACCTCCCAAGGGTCTaGTCTGGCTCAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PYKVRLINNLLPQPLHGPHLPRV*SGSAQA
Trigger: GGCCTGGGCTGAGCCAGACCAGACCCTTGGGAGGTG...TGGGCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QGKANTNNRKMVLGPKSSAGSLP*PRPQES
Trigger: GCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGC...GGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGGTCCAGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: NQIWPVKYPGRHLGLLGPAGSLP*PRPQES
Trigger: GCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGC...TGGACCAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR CCA 90 bp TCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACATAGAAAGATGGTTCTaGGCCCAAAGTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: SMAQMLGSTQGSTYPGPNIERWF*AQSLPA
Trigger: CGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT...GTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCAAGGTCAAATGAGTTGTaGGATCCACCGGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: PTFCPDETLLPGSQGGAPRSNEL*DPPGVY
Trigger: ATATACCCCCGGTGGATCCCACAACTCATTTGACCT...TGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCCCTCTGATGGCGTCATaGCCCAGTGTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IERWFWAQSLPAPPPITIPLMAS*PSVLPP
Trigger: AGGAGGAAGGACACTGGGTCATGACGCCATCAGAGG...GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACACCTCTGATGGCGTCATaGCCCAGTGTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TIERWFWAQSLPAPPPITPLMAS*PSVLPP
Trigger: AGGAGGAAGGACACTGGGTCATGACGCCATCAGAGG...TGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCCTCTGATGGCGTCATaGCCCAGTGTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WGRDRVRLTQTIERWFWAPLMAS*PSVLPP
Trigger: AGGAGGAAGGACACTGGGTCATGACGCCATCAGAGG...GGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCCCTCTGATGGCGTCATaGCCCAGTGTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSGPKVFPRPLQLQSNQIPLMAS*PSVLPP
Trigger: AGGAGGAAGGACACTGGGTCATGACGCCATCAGAGG...GATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ATACCGGGGGTATATGAGGATCGGAGTAGGGCTGGGACTCTACAGAGGGCCCCTACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: IPGVYEDRSRAGTLQRAPTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...AGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATATACCCCCGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR TCA 90 bp TCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: SVLMRRCFLAHKAGLHRQNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...TTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCCCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: IERWFWAQSLPAPPPITIPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCCCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTACCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: RKMVLGPKSSRAPSNYNLPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...TAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: WGRDRVRLTQTIERWFWARVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...GGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: RKMVLGPKSSRAPSNYNLRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...TAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: ANTNNRKMVLGPKSSRAPLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...GGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp TATATGAGGATCGGAGTAGGGCTGGGACTCTACAGAGGGCCCCTCTTGGAGATCTCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: YMRIGVGLGLYRGPLLEISQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...GATCTCCAAGAGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp AACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACCCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: NNRKMVLGPKSSRAPSNYPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...GTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCCCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: GSGPKVFPRPLQLQSNQIPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...GATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp ATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCCCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: IERWFWAQSLPAPPPITIPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp TCTCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAGACATAAAGGTCCTCTaGCATTATAGGGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: SPWPRCWDLLRDPRTQVPDIKVL*HYRGNG
Trigger: CCCATTCCCCCTATAATGGCAGAGGACCTTTATGTC...TGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp CTCTTTCTTGGACAGGTGAAGGTTAAAGGTCAAATGAGTTGTGGGATCCACCTGATGTGGCTGGTAGCCTaGCCTGGCCTAGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LFLGQVKVKGQMSCGIHLMWLVA*PGLGRR
Trigger: CCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACAT...CAGGTGGATCCCACAACTCATTTGACCTTTAACCTTCACCTGTCCAAGAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCGTCCTGATGAGACGCTaGTTCCTGGCTCACAAGGCG +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSVLMRR*FLAHKA
Trigger: CGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGAC...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCGTCCTGATGAGACGCTaGTTCCTGGCTCACAAGGCG +
Preference number: 4 (lower is better)
Translates to: GSGPKVFPRPLQLQSNQIVLMRR*FLAHKA
Trigger: CGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGAC...GATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp AGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAGTCCTGATGAGACGCTaGTTCCTGGCTCACAAGGCG +
Preference number: 4 (lower is better)
Translates to: RKMVLGPKSSRAPSNYNLVLMRR*FLAHKA
Trigger: CGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGAC...TAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGTGGGGCAGTTGTCAGTaGGAGGGGGAGGAGGACCCA +
Preference number: 4 (lower is better)
Translates to: KVGQGQGKANTNNRKMVLWGSCQ*EGEEDP
Trigger: TGGGTCCTCCTCCCCCTCCCACTGACAACTGCCCCA...CAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000396627.6
ENST00000672545.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: NNRKMVLGPKSSRAPSNYGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...GTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTAGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: PRSQPYFSELNWKGRIRLGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TTTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTCCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: FIRYGGVLLSHITPCLHPPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...AGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCGAGGCCTGGCCCATaGTACCGCCCAGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: EVDFSPYKVRLINNLLPQPRPGP*YRPGSP
Trigger: AGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGG...TTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTAATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLGTGVFYSLTLPHVFILMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...TAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCTGAGTCTGGTCAGTTaGGCGCTGTCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: QGKANTNNRKMVLGPKSSLSLVS*ALSGPP
Trigger: CGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAG...GGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTAGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LLGTGVFYSLTLPHVFILAGSLP*PRPQES
Trigger: GCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGC...TAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAAAGGTCAAATGAGTTGTaGGATCCACCGGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGERSNEL*DPPGVY
Trigger: ATATACCCCCGGTGGATCCCACAACTCATTTGACCT...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCCCTCTGATGGCGTCATaGCCCAGTGTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCPLMAS*PSVLPP
Trigger: AGGAGGAAGGACACTGGGTCATGACGCCATCAGAGG...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTCCTCTGATGGCGTCATaGCCCAGTGTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GTGVFYSLTLPHVFILPSPLMAS*PSVLPP
Trigger: AGGAGGAAGGACACTGGGTCATGACGCCATCAGAGG...AGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGCCTCTGATGGCGTCATaGCCCAGTGTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VRGCSTLSHYPMSSSYLLPLMAS*PSVLPP
Trigger: AGGAGGAAGGACACTGGGTCATGACGCCATCAGAGG...CAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SVLMRRCFLAHKAGLHRQTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...TTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: KDGSGPKVFPRPLQLQSNPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...ATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGCCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: VRGCSTLSHYPMSSSYLLPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...CAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGCCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCCCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: RYGGVLLSHITPCLHPTFPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...GAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GVFYSLTLPHVFILPSVLRVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...CAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VRGCSTLSHYPMSSSYLLRVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...CAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCRVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: GRDRVRLTQTIERWFWAQRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...TTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: YSGIHVPRSQPYFSELNWRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...CCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: RYGGVLLSHITPCLHPTFRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...GAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTACTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: RKMVLGPKSSRAPSNYNLLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...TAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACACTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: TIERWFWAQSLPAPPPITLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...TGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCTGT +
Preference number: 4 (lower is better)
Translates to: SMAQMLGSTQGSTYPGPNRLKVK*VVGSTC
Trigger: ACAGGTGGATCCCACAACTCATTTGACCTTTAACCT...GTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp ATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCGGACAACTGGAGCTGTaGCCCAAGGGTATAAGGGAG +
Preference number: 4 (lower is better)
Translates to: IERWFWAQSLPAPPPITIGQLEL*PKGIRE
Trigger: CTCCCTTATACCCTTGGGTCACAGCTCCAGTTGTCC...GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAGGAGAGCCTGCTGTCTaGGAAGGGAAGATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: CWDLLRDPRTQVPTLLFRGEPAV*EGKIWC
Trigger: GCACCAAATCTTCCCTTCTCAGACAGCAGGCTCTCC...TCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAACTCACTTTCCCCACTaGGGAGCTGTCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LRDPRTQVPTLLFRTELETHFPH*GAVTWQ
Trigger: CTGCCAGGTGACAGCTCCTCAGTGGGGAAAGTGAGT...TTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR TCA 90 bp CTACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGACTCACTTTCCCCACTaGGGAGCTGTCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLRDPRTQVPTLLFRTELTHFPH*GAVTWQ
Trigger: CTGCCAGGTGACAGCTCCTCAGTGGGGAAAGTGAGT...CAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp TATATGAGGATCGGAGTAGGGCTGGGACTCTACAGAGGGCCCCTCTTGGAGATCTTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: YMRIGVGLGLYRGPLLEILLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...GATCTCCAAGAGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR GCA 90 bp GCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: ANTNNRKMVLGPKSSRAPSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...GGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCCAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCCAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: ANTNNRKMVLGPKSSRAPQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...GGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: LSHITPCLHPTFCPDETLPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...CAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAACCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: LRDPRTQVPTLLFRTELEPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...TTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCCCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CAGGTCATCATAAGCATCTGGCTCATAGAAGATGTGGCTGGTAGCCTGCCCTGGAGGTACAAAGGATGCTaGCACTCTGCCCCATCCCTA +
Preference number: 4 (lower is better)
Translates to: QVIISIWLIEDVAGSLPWRYKGC*HSAPSL
Trigger: TAGGGATGGGGCAGAGTGGCAGCATCCTTTGTACCT...CCAGGGCAGGCTACCAGCCACATCTTCTATGAGCCAGATGCTTATGATGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp TTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTAATGTGGCTGGTAGCCTaGCCTGGCCTAGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LLGTGVFYSLTLPHVFILMWLVA*PGLGRR
Trigger: CCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACAT...TAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp AGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCGTCCTGATGAGACGCTaGTTCCTGGCTCACAAGGCG +
Preference number: 4 (lower is better)
Translates to: RYGGVLLSHITPCLHPTFVLMRR*FLAHKA
Trigger: CGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGAC...GAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp TACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGGTCCTGATGAGACGCTaGTTCCTGGCTCACAAGGCG +
Preference number: 4 (lower is better)
Translates to: YSGIHVPRSQPYFSELNWVLMRR*FLAHKA
Trigger: CGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGAC...CCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGCTGTCCTCTTGCACATaGCTCTCAAGGCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWLSSCT*LSRLPA
Trigger: CGCTGGGAGCCTTGAGAGCCATGTGCAAGAGGACAG...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: LSHITPCLHPTFCPDETLGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...CAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VRGCSTLSHYPMSSSYLLTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...CAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: GSGPKVFPRPLQLQSNQISSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...GATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: RKMVLGPKSSRAPSNYNLSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...TAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DLSLEVDFSPYKVRLINNMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...GTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATATGTGGGCCGAGGCCTaGCCCATGGTACCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FSPYKVRLINNLLPQPLHMWAEA*PMVPPR
Trigger: CCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACAT...ATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTCTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: FIRYGGVLLSHITPCLHPLRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...AGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACTCCGACACAGGATGTaGGCCGAGGCCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: EVDFSPYKVRLINNLLPQLRHRM*AEAWPM
Trigger: CATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAG...TTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAATTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGEFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGTGCTCTGGGGACAACTaGAGCTGTGACCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: RDPRTQVPTLLFRTELEGCSGDN*SCDPRV
Trigger: TACCCTTGGGTCACAGCTCCAGTTGTCCCCAGAGCA...CCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTATGCTCTGGGGACAACTaGAGCTGTGACCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: RKMVLGPKSSRAPSNYNLCSGDN*SCDPRV
Trigger: TACCCTTGGGTCACAGCTCCAGTTGTCCCCAGAGCA...TAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTCTCTCTCTTTCTTGGACAGGTGAAGGTTAAAGGTCAAATGAGTTGTGGGATCCCCCTCCCCGAGCCCTaGCGCACAGTCGTACGGACA +
Preference number: 4 (lower is better)
Translates to: FSLFLGQVKVKGQMSCGIPLPEP*RTVVRT
Trigger: TGTCCGTACGACTGTGCGCCAGGGCTCGGGGAGGGG...GATCCCACAACTCATTTGACCTTTAACCTTCACCTGTCCAAGAAAGAGAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574993.5
ENST00000673019.1
3UTR CAA 72 bp ATACTGGGCACAGAACAGCAAGCGTGTACTAAGCCCTaGTTAACCAGCCTCTGCCACGCCCATATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ILGTEQQACTKP*LTSLCHAHIAF
Trigger: GAAGGCTATATGGGCGTGGCAGAGGCTGGTTAACAAGGGCTTAGTACACGCTTGCTGTTCTGTGCCCAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CWDLLRDPRTQVPTLLFRGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...TCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: NNRKMVLGPKSSRAPSNYEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...GTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: TQVPTLLFRTELEGQDQAEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...AGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGCCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: KVGQGQGKANTNNRKMVLPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...CAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCCCAAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PYKVRLINNLLPQPLHGPRVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...TGGGCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTATCTAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RSQPYFSELNWKGRIRLSRVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...AGATAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTRVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: NGWIKNLDLSLEVDFSPYRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...ATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: GWIKNLDLSLEVDFSPYKRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...TTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGGACAACTGGAGCTGTaGCCCAAGGGTATAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWGQLEL*PKGIRE
Trigger: CTCCCTTATACCCTTGGGTCACAGCTCCAGTTGTCC...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGGGAGAGCCTGCTGTCTaGGAAGGGAAGATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: YSGIHVPRSQPYFSELNWGEPAV*EGKIWC
Trigger: GCACCAAATCTTCCCTTCTCAGACAGCAGGCTCTCC...CCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCGGG +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGRLKVK*VVGSTG
Trigger: CCCGGTGGATCCCACAACTCATTTGACCTTTAACCT...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCTTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGLLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCACCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GQGQGKANTNNRKMVLGPPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...TGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp ACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTCCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TQVPTLLFRTELEGQDQAPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...AGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp CAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: QMLGSTQGSTYPGPNLTFPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...AAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp AGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTATCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: RKMVLGPKSSRAPSNYNLSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...TAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp ATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCCAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: IERWFWAQSLPAPPPITIQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp AACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACCAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: NNRKMVLGPKSSRAPSNYQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...GTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp ACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACACAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: TIERWFWAQSLPAPPPITQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...TGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCCCACCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: PYKVRLINNLLPQPLHGPPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...TGGGCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCCCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAAGGATGCTGCCACTCTaGCCCATCCCTAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: LRDPRTQVPTLLFRTELERMLPL*PIPRIP
Trigger: AGGGATTCTAGGGATGGGGCAGAGTGGCAGCATCCT...TTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp ATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCAGGTACAAAGGATGCTaGCACTCTGCCCCATCCCTA +
Preference number: 4 (lower is better)
Translates to: IERWFWAQSLPAPPPITIRYKGC*HSAPSL
Trigger: TAGGGATGGGGCAGAGTGGCAGCATCCTTTGTACCT...GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCAGGTACAAAGGATGCTaGCACTCTGCCCCATCCCTA +
Preference number: 4 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPRYKGC*HSAPSL
Trigger: TAGGGATGGGGCAGAGTGGCAGCATCCTTTGTACCT...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp GTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGTGTAGGTACAAAGGATaGTGCCACTCTGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: VPRSQPYFSELNWKGRIRCRYKG*CHSAPS
Trigger: GGATGGGGCAGAGTGGCAGCATCCTTTGTACCTACA...CCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp AATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGATGTGGCTGGTAGCCTaGCCTGGCCTAGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: NLIKSGQSNIQVVIWVFLMWLVA*PGLGRR
Trigger: CCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACAT...CAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR GCA 90 bp GAAGATTTGGTGCTGGTGAGGGTAGCTAACAGGTTGGGTCTGGATACTTTCTTCGTCCTGATGAGACGCTaGTTCCTGGCTCACAAGGCG +
Preference number: 4 (lower is better)
Translates to: EDLVLVRVANRLGLDTFFVLMRR*FLAHKA
Trigger: CGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGAC...GAAGAAAGTATCCAGACCCAACCTGTTAGCTACCCTCACCAGCACCAAATCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCGGCCGCAGGAGAGCCTaGTGTTTTTCAGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSGRRRA*CFSELN
Trigger: GTTCAGTTCTGAAAAACAGCAGGCTCTCCTGCGGCC...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: MGGSRTWTCLWRWTSVPITACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...TATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: LSHITPCLHPTFCPDETLSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...CAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGTGCTCTGGGGACAACTaGAGCTGTGACCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: LLRDPRTQVPTLLFRTELCSGDN*SCDPRV
Trigger: TACCCTTGGGTCACAGCTCCAGTTGTCCCCAGAGCA...CAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGAGTCATCATAAGCATCTaGCTCATAGAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRVIISI*LIEDVA
Trigger: AGCCACATCTTCTATGAGCCAGATGCTTATGATGAC...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QMLGSTQGSTYPGPNLTFIQVVI*VFLVQV
Trigger: GACCTGGACCAAGAAGACCCAGATGACGACCTGGAT...AAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: NNRKMVLGPKSSRAPSNYIQVVI*VFLVQV
Trigger: GACCTGGACCAAGAAGACCCAGATGACGACCTGGAT...GTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCATAGAAAGATGGTTCTaGGCCCAAAGTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGIERWF*AQSLPA
Trigger: CGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAATCACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: LRDPRTQVPTLLFRTELESPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTGA...TTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR TCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTCTACATTTTCACTGTaGCCGGGGCGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTSTFSL*PGREEQ
Trigger: CTGCTCTTCCCGCCCCGGTCACAGTGAAAATGTAGA...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGTGCTCTGGCGCCCTCTaGTGGCGTCATGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: NLIKSGQSNIQVVIWVFLCSGAL*WRHDPV
Trigger: CACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCA...CAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: ANTNNRKMVLGPKSSRAPTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...GGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: SMAQMLGSTQGSTYPGPNKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...GTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGAAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VRGCSTLSHYPMSSSYLLGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...CAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GVFYSLTLPHVFILPSVLGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...CAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CTACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLRDPRTQVPTLLFRTELGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...CAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RYGGVLLSHITPCLHPTFGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...GAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: RDPRTQVPTLLFRTELEGNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...CCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: QMLGSTQGSTYPGPNLTFNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...AAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: KDGSGPKVFPRPLQLQSNEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...ATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGCCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: IKNLDLSLEVDFSPYKVRPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...CCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: RDRVRLTQTIERWFWAQSPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...ACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TTCAGGCAACCTGTTAGGCCTCCATGTCATTTTATTGGTCCAAGTCCCTTTCTCAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: FRQPVRPPCHFIGPSPFLRVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...GAGAAAGGGACTTGGACCAATAAAATGACATGGAGGCCTAACAGGTTGCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CTCTTTCTTGGACAGGTGAAGGTTAAAGGTCAAATGAGTTGTGGGATCCACCTGAGGGTCACCTCAGTCTaGGCAAGGCTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LFLGQVKVKGQMSCGIHLRVTSV*ARLLRA
Trigger: AGCTCTCAGCAGCCTTGCTCAGACTGAGGTGACCCT...CAGGTGGATCCCACAACTCATTTGACCTTTAACCTTCACCTGTCCAAGAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: QGKANTNNRKMVLGPKSSRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...GGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: GGSRTWTCLWRWTSVPIKLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...CTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: TKVGQGQGKANTNNRKMVLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...AACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: YSLTLPHVFILPSVLMRRLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...GCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTATCTGGACAACTGGAGCTGTaGCCCAAGGGTATAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RSQPYFSELNWKGRIRLSGQLEL*PKGIRE
Trigger: CTCCCTTATACCCTTGGGTCACAGCTCCAGTTGTCC...AGATAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp ACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCGGG +
Preference number: 4 (lower is better)
Translates to: TIERWFWAQSLPAPPPITRLKVK*VVGSTG
Trigger: CCCGGTGGATCCCACAACTCATTTGACCTTTAACCT...TGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR GCA 90 bp TGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCTTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: WGRDRVRLTQTIERWFWALLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...GGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTATTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: PRSQPYFSELNWKGRIRLLLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp GGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAACCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GRDRVRLTQTIERWFWAQPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...TTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp AAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATTCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: KDGSGPKVFPRPLQLQSNSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...ATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp AGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: RYGGVLLSHITPCLHPTFSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...GAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: VRGCSTLSHYPMSSSYLLSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...CAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAATCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: GRDRVRLTQTIERWFWAQSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...TTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAACAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GRDRVRLTQTIERWFWAQQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...TTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGCAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: VRGCSTLSHYPMSSSYLLQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...CAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGCAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCCAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATCCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: GVLLSHITPCLHPTFCPDPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...ATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp TACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGTCTCCATGGCCCAGATaGTGGGATCTACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: YSGIHVPRSQPYFSELNWSPWPR*WDLLRD
Trigger: ATCCCTGAGTAGATCCCAGCATCTGGGCCATGGAGA...CCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp ATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGGTCCTGATGAGACGCTaGTTCCTGGCTCACAAGGCG +
Preference number: 4 (lower is better)
Translates to: IKNLDLSLEVDFSPYKVRVLMRR*FLAHKA
Trigger: CGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGAC...CCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp GTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGGGCCGCAGGAGAGCCTaGTGTTTTTCAGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: VRGCSTLSHYPMSSSYLLGRRRA*CFSELN
Trigger: GTTCAGTTCTGAAAAACAGCAGGCTCTCCTGCGGCC...CAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGGGCCGCAGGAGAGCCTaGTGTTTTTCAGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWGRRRA*CFSELN
Trigger: GTTCAGTTCTGAAAAACAGCAGGCTCTCCTGCGGCC...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: RDRVRLTQTIERWFWAQSGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...ACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: SPYKVRLINNLLPQPLHGGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGGTCCAACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: NQIWPVKYPGRHLGLLGPTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...TGGACCAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR CCA 90 bp AGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPYKVRLINNLLPQPLHGTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTTCCTTGTTCTGGCCTTGGCATTCTTAGATACCGGGGGTATATGAGGATCGGAAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: FPCSGLGILRYRGYMRIGSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...TCCGATCCTCATATACCCCCGGTATCTAAGAATGCCAAGGCCAGAACAAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CCA 90 bp GGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: GWIKNLDLSLEVDFSPYKSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...TTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TATATGAGGATCGGAGTAGGGCTGGGACTCTACAGAGGGCCCCTCTTGGAGATCTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: YMRIGVGLGLYRGPLLEIFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...GATCTCCAAGAGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CCA 90 bp ATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCACTTGGACTTGTCTCTaGAGGTGGACTTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: IERWFWAQSLPAPPPITITWTCL*RWTSVP
Trigger: AGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGT...GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAGGTGGATCAAGAACTTaGACTTGTCTCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RKMVLGPKSSRAPSNYNLGGSRT*TCLWRW
Trigger: CCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACC...TAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp GGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAGGTGGATCAAGAACTTaGACTTGTCTCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GQGQGKANTNNRKMVLGPGGSRT*TCLWRW
Trigger: CCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACC...TGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCACCTCCCAAGGGTCTaGTCTGGCTCAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LQSNQIWPVKYPGRHLGLHLPRV*SGSAQA
Trigger: GGCCTGGGCTGAGCCAGACCAGACCCTTGGGAGGTG...AAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCIQVVI*VFLVQV
Trigger: GACCTGGACCAAGAAGACCCAGATGACGACCTGGAT...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KDGSGPKVFPRPLQLQSNIQVVI*VFLVQV
Trigger: GACCTGGACCAAGAAGACCCAGATGACGACCTGGAT...ATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GTGVFYSLTLPHVFILPSIQVVI*VFLVQV
Trigger: GACCTGGACCAAGAAGACCCAGATGACGACCTGGAT...AGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWIQVVI*VFLVQV
Trigger: GACCTGGACCAAGAAGACCCAGATGACGACCTGGAT...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCACAATCTAATCAAATCTaGCCAGTCAAATATCCAGGT +
Preference number: 4 (lower is better)
Translates to: PTFCPDETLLPGSQGGAPQSNQI*PVKYPG
Trigger: ACCTGGATATTTGACTGGCCAGATTTGATTAGATTG...TGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTACCTCTGATGGCGTCATaGCCCAGTGTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KNLDLSLEVDFSPYKVRLPLMAS*PSVLPP
Trigger: AGGAGGAAGGACACTGGGTCATGACGCCATCAGAGG...TAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCCTCTGATGGCGTCATaGCCCAGTGTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DFSPYKVRLINNLLPQPLPLMAS*PSVLPP
Trigger: AGGAGGAAGGACACTGGGTCATGACGCCATCAGAGG...GAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: VPRSQPYFSELNWKGRIRTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...CCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: SVLMRRCFLAHKAGLHRQKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...TTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KVGQGQGKANTNNRKMVLGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...CAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: KDGSGPKVFPRPLQLQSNNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...ATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: YSLTLPHVFILPSVLMRREVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...GCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: MGGSRTWTCLWRWTSVPIEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...TATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCTTGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: SHITPCLHPTFCPDETLLEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...AAGCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: GWIKNLDLSLEVDFSPYKEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...TTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: DFSPYKVRLINNLLPQPLPGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGG...GAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: RDRVRLTQTIERWFWAQSLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...ACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: GVLLSHITPCLHPTFCPDLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...ATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGGTCCAGGAGAGCCTGCTGTCTaGGAAGGGAAGATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: NQIWPVKYPGRHLGLLGPGEPAV*EGKIWC
Trigger: GCACCAAATCTTCCCTTCTCAGACAGCAGGCTCTCC...TGGACCAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCGGG +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWRLKVK*VVGSTG
Trigger: CCCGGTGGATCCCACAACTCATTTGACCTTTAACCT...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR GCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCTTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCLLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWLLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp TACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCCCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: YSLTLPHVFILPSVLMRRPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...GCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp ACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TKVGQGQGKANTNNRKMVPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...AACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCCCATCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: PYKVRLINNLLPQPLHGPSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...TGGGCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp ATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATATCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: MGGSRTWTCLWRWTSVPISQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...TATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp AAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTACCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: KNLDLSLEVDFSPYKVRLPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...TAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp AATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATTCTCCATGGCCCAGATaGTGGGATCTACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: NGWIKNLDLSLEVDFSPYSPWPR*WDLLRD
Trigger: ATCCCTGAGTAGATCCCAGCATCTGGGCCATGGAGA...ATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp ATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCGACATAAAGGTCCTCTaGCATTATAGGGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: IERWFWAQSLPAPPPITIDIKVL*HYRGNG
Trigger: CCCATTCCCCCTATAATGGCAGAGGACCTTTATGTC...GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp TACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCGGCCGCAGGAGAGCCTaGTGTTTTTCAGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: YSLTLPHVFILPSVLMRRGRRRA*CFSELN
Trigger: GTTCAGTTCTGAAAAACAGCAGGCTCTCCTGCGGCC...GCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TTTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: FIRYGGVLLSHITPCLHPGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...AGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: IKNLDLSLEVDFSPYKVRSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...CCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGGTCCAAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: NQIWPVKYPGRHLGLLGPSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...TGGACCAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR CCA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGACTTGGACTTGTCTCTaGAGGTGGACTTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWTWTCL*RWTSVP
Trigger: AGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGT...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGTGGATCAAGAACTTaGACTTGTCTCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRDPRTQVPTLLFRTELEGGSRT*TCLWRW
Trigger: CCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACC...TTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCTATAGGGGGAATGGGTaGATCAAGAACTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGYRGNG*IKNLDL
Trigger: CAAGTCCAAGTTCTTGATCCACCCATTCCCCCTATA...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTCAGGCAACCTGTTAGGCCTCCATGTCATTTTATTGGTCCAAGTCCCTTTCTCCATCCGCCCACATACTaGGCACAGAACAGCAAGCGT +
Preference number: 4 (lower is better)
Translates to: FRQPVRPPCHFIGPSPFLHPPTY*AQNSKR
Trigger: ACGCTTGCTGTTCTGTGCCCAGTATGTGGGCGGATG...GAGAAAGGGACTTGGACCAATAAAATGACATGGAGGCCTAACAGGTTGCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCCATCCGCCCACATACTaGGCACAGAACAGCAAGCGT +
Preference number: 4 (lower is better)
Translates to: SPYKVRLINNLLPQPLHGHPPTY*AQNSKR
Trigger: ACGCTTGCTGTTCTGTGCCCAGTATGTGGGCGGATG...GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTIQVVI*VFLVQV
Trigger: GACCTGGACCAAGAAGACCCAGATGACGACCTGGAT...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KVGQGQGKANTNNRKMVLIQVVI*VFLVQV
Trigger: GACCTGGACCAAGAAGACCCAGATGACGACCTGGAT...CAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAACAATCTAATCAAATCTaGCCAGTCAAATATCCAGGT +
Preference number: 4 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGEQSNQI*PVKYPG
Trigger: ACCTGGATATTTGACTGGCCAGATTTGATTAGATTG...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATCCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCAATCTAATCAAATCTaGCCAGTCAAATATCCAGGT +
Preference number: 4 (lower is better)
Translates to: ILPSVLMRRCFLAHKAGLQSNQI*PVKYPG
Trigger: ACCTGGATATTTGACTGGCCAGATTTGATTAGATTG...GAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCATAGAAAGATGGTTCTaGGCCCAAAGTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCIERWF*AQSLPA
Trigger: CGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATATAGAAAGATGGTTCTaGGCCCAAAGTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: KDGSGPKVFPRPLQLQSNIERWF*AQSLPA
Trigger: CGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT...ATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCAGGTCAAATGAGTTGTaGGATCCACCGGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: WGRDRVRLTQTIERWFWARSNEL*DPPGVY
Trigger: ATATACCCCCGGTGGATCCCACAACTCATTTGACCT...GGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCAGGTCAAATGAGTTGTaGGATCCACCGGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPRSNEL*DPPGVY
Trigger: ATATACCCCCGGTGGATCCCACAACTCATTTGACCT...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
3UTR CAA 72 bp CTCTGCCATTATAGGGGGAATGGGTGGATCAAGAACTaGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTAT +
Preference number: 4 (lower is better)
Translates to: LCHYRGNGWIKN*DLSLEVDFSPY
Trigger: ATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCATTCCCCCTATAATGGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
3UTR CAA 72 bp AGGGAAGATTTGGTGCTGGTGAGGGTAGCTAACAGGTaGGGTCTGGATACTTTCTTCCAGGTGACTGTGACT +
Preference number: 4 (lower is better)
Translates to: REDLVLVRVANR*GLDTFFQVTVT
Trigger: AGTCACAGTCACCTGGAAGAAAGTATCCAGACCCAACCTGTTAGCTACCCTCACCAGCACCAAATCTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCTCTACATTTTCACTGTaGCCGGGGCGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: DFSPYKVRLINNLLPQPLSTFSL*PGREEQ
Trigger: CTGCTCTTCCCGCCCCGGTCACAGTGAAAATGTAGA...GAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATCCTCTGATGGCGTCATaGCCCAGTGTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LDLSLEVDFSPYKVRLINPLMAS*PSVLPP
Trigger: AGGAGGAAGGACACTGGGTCATGACGCCATCAGAGG...ATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: GRDRVRLTQTIERWFWAQTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...TTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: KDGSGPKVFPRPLQLQSNTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...ATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: VRGCSTLSHYPMSSSYLLTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...CAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GVLLSHITPCLHPTFCPDGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...ATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LEVDFSPYKVRLINNLLPGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...GGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCTTAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: SHITPCLHPTFCPDETLLNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...AAGCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: GGSRTWTCLWRWTSVPIKNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...CTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: QGKANTNNRKMVLGPKSSEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...GGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGAGGATGGAGAACCACTaGGTCTGGTCAGTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: NLIKSGQSNIQVVIWVFLRMENH*VWSVGR
Trigger: GCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCT...CAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR TCA 90 bp TTTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTGGACAACTGGAGCTGTaGCCCAAGGGTATAAGGGAG +
Preference number: 4 (lower is better)
Translates to: FIRYGGVLLSHITPCLHPGQLEL*PKGIRE
Trigger: CTCCCTTATACCCTTGGGTCACAGCTCCAGTTGTCC...AGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCGGG +
Preference number: 4 (lower is better)
Translates to: KVGQGQGKANTNNRKMVLRLKVK*VVGSTG
Trigger: CCCGGTGGATCCCACAACTCATTTGACCTTTAACCT...CAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCGGG +
Preference number: 4 (lower is better)
Translates to: MGGSRTWTCLWRWTSVPIRLKVK*VVGSTG
Trigger: CCCGGTGGATCCCACAACTCATTTGACCTTTAACCT...TATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576496.5
ENST00000671885.1
CDS-3UTR GCA 90 bp CCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCCCATTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: PYKVRLINNLLPQPLHGPLLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...TGGGCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp TCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCTTTTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: SHITPCLHPTFCPDETLLLLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...AAGCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp AAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGTTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: KVGQGQGKANTNNRKMVLLLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...CAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp GGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAATTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: GWIKNLDLSLEVDFSPYKLLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...TTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp GGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATCCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GVLLSHITPCLHPTFCPDPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...ATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LEVDFSPYKVRLINNLLPPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...GGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp AGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCTCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: SPYKVRLINNLLPQPLHGSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp AGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTTCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: RDRVRLTQTIERWFWAQSSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...ACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp ATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: IKNLDLSLEVDFSPYKVRSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...CCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp ATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGCAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: IKNLDLSLEVDFSPYKVRQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...CCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp GACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: DLSLEVDFSPYKVRLINNPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...GTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp GAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAAAGGATGCTGCCACTCTaGCCCATCCCTAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: EVDFSPYKVRLINNLLPQRMLPL*PIPRIP
Trigger: AGGGATTCTAGGGATGGGGCAGAGTGGCAGCATCCT...TTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp GGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATTGTAGGTACAAAGGATaGTGCCACTCTGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: GVLLSHITPCLHPTFCPDCRYKG*CHSAPS
Trigger: GGATGGGGCAGAGTGGCAGCATCCTTTGTACCTACA...ATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTGTTAACCAGCCTCTaGCACGCCCATATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTLLTSL*HAHIAF
Trigger: GAAGGCTATATGGGCGTGGCAGAGGCTGGTTAACAA...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp GGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGGCCGCAGGAGAGCCTaGTGTTTTTCAGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: GVLLSHITPCLHPTFCPDGRRRA*CFSELN
Trigger: GTTCAGTTCTGAAAAACAGCAGGCTCTCCTGCGGCC...ATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LDLSLEVDFSPYKVRLINTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...ATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTAAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: LLGTGVFYSLTLPHVFILSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...TAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACATTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: TIERWFWAQSLPAPPPITFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...TGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAACTTGTCTCTGGAGGTaGACTTCAGTCCCTATAAAG +
Preference number: 4 (lower is better)
Translates to: GQGQGKANTNNRKMVLGPTCLWR*TSVPIK
Trigger: CTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGT...TGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGACTTGTCTCTGGAGGTaGACTTCAGTCCCTATAAAG +
Preference number: 4 (lower is better)
Translates to: RDPRTQVPTLLFRTELEGTCLWR*TSVPIK
Trigger: CTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGT...CCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTACTTGTCTCTGGAGGTaGACTTCAGTCCCTATAAAG +
Preference number: 4 (lower is better)
Translates to: QMLGSTQGSTYPGPNLTFTCLWR*TSVPIK
Trigger: CTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGT...AAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp ATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAACTTGGACTTGTCTCTaGAGGTGGACTTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: MGGSRTWTCLWRWTSVPITWTCL*RWTSVP
Trigger: AGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGT...TATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp GGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGGGTGGATCAAGAACTTaGACTTGTCTCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGSRTWTCLWRWTSVPIKGGSRT*TCLWRW
Trigger: CCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACC...CTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RDRVRLTQTIERWFWAQSIQVVI*VFLVQV
Trigger: GACCTGGACCAAGAAGACCCAGATGACGACCTGGAT...ACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCATCCAGGTCGTCATCTaGGTCTTCTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QGKANTNNRKMVLGPKSSIQVVI*VFLVQV
Trigger: GACCTGGACCAAGAAGACCCAGATGACGACCTGGAT...GGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCATAGAAAGATGGTTCTaGGCCCAAAGTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: YSLTLPHVFILPSVLMRRIERWF*AQSLPA
Trigger: CGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT...GCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCATAGAAAGATGGTTCTaGGCCCAAAGTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTIERWF*AQSLPA
Trigger: CGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: KVGQGQGKANTNNRKMVLTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...CAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCTTACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SHITPCLHPTFCPDETLLTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...AAGCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: GWIKNLDLSLEVDFSPYKTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...TTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAAGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: EVDFSPYKVRLINNLLPQGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...TTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: RDRVRLTQTIERWFWAQSNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...ACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: DLSLEVDFSPYKVRLINNLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...GTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCTGT +
Preference number: 4 (lower is better)
Translates to: YSGIHVPRSQPYFSELNWRLKVK*VVGSTC
Trigger: ACAGGTGGATCCCACAACTCATTTGACCTTTAACCT...CCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LRDPRTQVPTLLFRTELERLKVK*VVGSTC
Trigger: ACAGGTGGATCCCACAACTCATTTGACCTTTAACCT...TTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACGGAGAGCCTGCTGTCTaGGAAGGGAAGATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: DLSLEVDFSPYKVRLINNGEPAV*EGKIWC
Trigger: GCACCAAATCTTCCCTTCTCAGACAGCAGGCTCTCC...GTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCGGG +
Preference number: 4 (lower is better)
Translates to: QGKANTNNRKMVLGPKSSRLKVK*VVGSTG
Trigger: CCCGGTGGATCCCACAACTCATTTGACCTTTAACCT...GGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR GCA 90 bp CTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCTTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: LEVDFSPYKVRLINNLLPLLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...GGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp TTACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: LQSNQIWPVKYPGRHLGLPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...AAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR GCA 90 bp TTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTATCTCCATGGCCCAGATaGTGGGATCTACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LLGTGVFYSLTLPHVFILSPWPR*WDLLRD
Trigger: ATCCCTGAGTAGATCCCAGCATCTGGGCCATGGAGA...TAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp AGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTTTGTTAACCAGCCTCTaGCACGCCCATATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RDRVRLTQTIERWFWAQSLLTSL*HAHIAF
Trigger: GAAGGCTATATGGGCGTGGCAGAGGCTGGTTAACAA...ACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp TTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTAGGCCGCAGGAGAGCCTaGTGTTTTTCAGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: LLGTGVFYSLTLPHVFILGRRRA*CFSELN
Trigger: GTTCAGTTCTGAAAAACAGCAGGCTCTCCTGCGGCC...TAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CAATTACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: QLQSNQIWPVKYPGRHLGGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...ACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR CCA 90 bp CAATTACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QLQSNQIWPVKYPGRHLGTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...ACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR CCA 90 bp AATTACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: NYNLIKSGQSNIQVVIWVTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...GACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR CCA 90 bp GTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: VRGCSTLSHYPMSSSYLLFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...CAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGTATAGGGGGAATGGGTaGATCAAGAACTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: LSHITPCLHPTFCPDETLYRGNG*IKNLDL
Trigger: CAAGTCCAAGTTCTTGATCCACCCATTCCCCCTATA...CAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CTACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGTATAGGGGGAATGGGTaGATCAAGAACTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: LLRDPRTQVPTLLFRTELYRGNG*IKNLDL
Trigger: CAAGTCCAAGTTCTTGATCCACCCATTCCCCCTATA...CAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACGTCATCATAAGCATCTaGCTCATAGAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: NNRKMVLGPKSSRAPSNYVIISI*LIEDVA
Trigger: AGCCACATCTTCTATGAGCCAGATGCTTATGATGAC...GTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATATAGAAAGATGGTTCTaGGCCCAAAGTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: GVLLSHITPCLHPTFCPDIERWF*AQSLPA
Trigger: CGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT...ATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCCAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGQTIER*FWAQSL
Trigger: AAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTG...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: QGKANTNNRKMVLGPKSSTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...GGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp ATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: IERWFWAQSLPAPPPITIKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: VPRSQPYFSELNWKGRIRKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...CCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTAAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: PRSQPYFSELNWKGRIRLKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: DLSLEVDFSPYKVRLINNEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...GTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCGGG +
Preference number: 4 (lower is better)
Translates to: DFSPYKVRLINNLLPQPLRLKVK*VVGSTG
Trigger: CCCGGTGGATCCCACAACTCATTTGACCTTTAACCT...GAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576496.5
ENST00000671885.1
CDS-3UTR GCA 90 bp TTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTATTGCTCCCCACACAGTaGAGATTTCTTGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: LLGTGVFYSLTLPHVFILLLPTQ*RFLDKR
Trigger: GCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAA...TAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR GCA 90 bp AATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGTCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: NLIKSGQSNIQVVIWVFLSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...CAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR GCA 90 bp GACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: DLSLEVDFSPYKVRLINNQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...GTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp TTTTATTTTCTCTCCCGTGACCAGATACTAAACTACATTTCCTTGTTCTGGCCTCCTGGCAGAGTGTGGTaGAGGGAAGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: FYFLSRDQILNYISLFWPPGRVW*REGEVA
Trigger: TGCTACTTCGCCTTCCCTGCACCACACTCTGCCAGG...AGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571146.2
ENST00000572104.2
ENST00000672061.1
ENST00000673102.1
CDS-3UTR GCA 90 bp CAATTACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTAGGATGCTGCCACTCTaGCCCATCCCTAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: QLQSNQIWPVKYPGRHLGRMLPL*PIPRIP
Trigger: AGGGATTCTAGGGATGGGGCAGAGTGGCAGCATCCT...ACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp GACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACTGTAGGTACAAAGGATaGTGCCACTCTGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: DLSLEVDFSPYKVRLINNCRYKG*CHSAPS
Trigger: GGATGGGGCAGAGTGGCAGCATCCTTTGTACCTACA...GTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp AATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGTGTAGGTACAAAGGATaGTGCCACTCTGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: NLIKSGQSNIQVVIWVFLCRYKG*CHSAPS
Trigger: GGATGGGGCAGAGTGGCAGCATCCTTTGTACCTACA...CAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp TTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATTCTCCATGGCCCAGATaGTGGGATCTACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: FSPYKVRLINNLLPQPLHSPWPR*WDLLRD
Trigger: ATCCCTGAGTAGATCCCAGCATCTGGGCCATGGAGA...ATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTTTATTTTCTCTCCCGTGACCAGATACTAAACTACATTTCCTTGTTCTGGCCTGGACCTGGCAGAGTGTaGTGCAGGGAAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: FYFLSRDQILNYISLFWPGPGRV*CREGEV
Trigger: TACTTCGCCTTCCCTGCACCACACTCTGCCAGGTCC...AGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572104.2
ENST00000673102.1
CDS-3UTR CCA 90 bp TTTTATTTTCTCTCCCGTGACCAGATACTAAACTACATTTCCTTGTTCTGGCCTACAGCATGCAGGACCTaGCAGAGTGTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FYFLSRDQILNYISLFWPTACRT*QSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGT...AGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572104.2
ENST00000673102.1
CDS-3UTR CCA 90 bp CAATTACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTAGCTCCCACAGGGCCTaGTCCATGAAGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: QLQSNQIWPVKYPGRHLGSSHRA*SMKLFM
Trigger: CATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCT...ACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR CCA 90 bp TACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: YSLTLPHVFILPSVLMRRFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...GCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTATCTTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: RSQPYFSELNWKGRIRLSFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...AGATAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAGGTGGATCAAGAACTTaGACTTGTCTCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KNLDLSLEVDFSPYKVRLGGSRT*TCLWRW
Trigger: CCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACC...TAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCGTCATCATAAGCATCTaGCTCATAGAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCVIISI*LIEDVA
Trigger: AGCCACATCTTCTATGAGCCAGATGCTTATGATGAC...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGGTCATCATAAGCATCTaGCTCATAGAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWVIISI*LIEDVA
Trigger: AGCCACATCTTCTATGAGCCAGATGCTTATGATGAC...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TTTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTATAGAAAGATGGTTCTaGGCCCAAAGTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: FIRYGGVLLSHITPCLHPIERWF*AQSLPA
Trigger: CGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT...AGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCATAGAAAGATGGTTCTaGGCCCAAAGTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: DFSPYKVRLINNLLPQPLIERWF*AQSLPA
Trigger: CGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT...GAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCCAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSQTIER*FWAQSL
Trigger: AAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTG...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp ATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCCAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: IERWFWAQSLPAPPPITIQTIER*FWAQSL
Trigger: AAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTG...GATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: WGRDRVRLTQTIERWFWAQTIER*FWAQSL
Trigger: AAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTG...GGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp CCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTACAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: PRSQPYFSELNWKGRIRLQTIER*FWAQSL
Trigger: AAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTG...TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCAGGTCAAATGAGTTGTaGGATCCACCGGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: LEVDFSPYKVRLINNLLPRSNEL*DPPGVY
Trigger: ATATACCCCCGGTGGATCCCACAACTCATTTGACCT...GGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000576496.5
ENST00000671885.1
CDS-3UTR CCA 90 bp CAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCAGGTCAAATGAGTTGTaGGATCCACCGGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: QGKANTNNRKMVLGPKSSRSNEL*DPPGVY
Trigger: ATATACCCCCGGTGGATCCCACAACTCATTTGACCT...GGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
3UTR CAA 72 bp CATTATAGGGGGAATGGGTGGATCAAGAACTTGGACTaGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTC +
Preference number: 4 (lower is better)
Translates to: HYRGNGWIKNLD*SLEVDFSPYKV
Trigger: GACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCATTCCCCCTATAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: DFSPYKVRLINNLLPQPLTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...GAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: GVFYSLTLPHVFILPSVLKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...CAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: LSHITPCLHPTFCPDETLKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...CAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: KDGSGPKVFPRPLQLQSNKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...ATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp AATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: NLIKSGQSNIQVVIWVFLNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...CAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR TCA 90 bp TTACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: LQSNQIWPVKYPGRHLGLEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...AAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR TCA 90 bp TTTTATTTTCTCTCCCGTGACCAGATACTAAACTACATTTCCTTGTTCTGGCCTCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: FYFLSRDQILNYISLFWPLGDPG*SPEGWR
Trigger: TCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAG...AGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571146.2
ENST00000572104.2
ENST00000672061.1
ENST00000673102.1
CDS-3UTR TCA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTTATTTTCTCTCCCGTaGCCAGATACTAAACTACAT +
Preference number: 4 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSLFSLP*PDTKLH
Trigger: ATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAA...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp GTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGTTATTTTCTCTCCCGTaGCCAGATACTAAACTACAT +
Preference number: 4 (lower is better)
Translates to: VPRSQPYFSELNWKGRIRLFSLP*PDTKLH
Trigger: ATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAA...CCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TTCAGGCAACCTGTTAGGCCTCCATGTCATTTTATTGGTCCAAGTCCCTTTCTCAGGTTAAAGGTCAAATaGGTTGTGGGATCCACCTGT +
Preference number: 4 (lower is better)
Translates to: FRQPVRPPCHFIGPSPFLRLKVK*VVGSTC
Trigger: ACAGGTGGATCCCACAACTCATTTGACCTTTAACCT...GAGAAAGGGACTTGGACCAATAAAATGACATGGAGGCCTAACAGGTTGCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TTTTATTTTCTCTCCCGTGACCAGATACTAAACTACATTTCCTTGTTCTGGCCTTCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: FYFLSRDQILNYISLFWPSGQES*WLTACR
Trigger: CCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGA...AGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572104.2
ENST00000673102.1
CDS-3UTR GCA 90 bp AATTACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCCCCAGGATATGCACTTaGTCCCCACACAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: NYNLIKSGQSNIQVVIWVPRICT*SPHSAD
Trigger: ATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGG...GACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR GCA 90 bp AATTACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTCACAGCCCAGGATATaGACTTGCTCCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: NYNLIKSGQSNIQVVIWVSQPRI*TCSPHS
Trigger: ACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGA...GACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR GCA 90 bp TTCTCTCTCTTTCTTGGACAGGTGAAGGTTAAAGGTCAAATGAGTTGTGGGATCTTGTTAACCAGCCTCTaGCACGCCCATATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FSLFLGQVKVKGQMSCGILLTSL*HAHIAF
Trigger: GAAGGCTATATGGGCGTGGCAGAGGCTGGTTAACAA...GATCCCACAACTCATTTGACCTTTAACCTTCACCTGTCCAAGAAAGAGAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CTCTTTCTTGGACAGGTGAAGGTTAAAGGTCAAATGAGTTGTGGGATCCACCTGTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: LFLGQVKVKGQMSCGIHLFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...CAGGTGGATCCCACAACTCATTTGACCTTTAACCTTCACCTGTCCAAGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTCAGGCAACCTGTTAGGCCTCCATGTCATTTTATTGGTCCAAGTCCCTTTCTCTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: FRQPVRPPCHFIGPSPFLFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...GAGAAAGGGACTTGGACCAATAAAATGACATGGAGGCCTAACAGGTTGCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp ATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGACTTGTCTCTGGAGGTaGACTTCAGTCCCTATAAAG +
Preference number: 4 (lower is better)
Translates to: IKNLDLSLEVDFSPYKVRTCLWR*TSVPIK
Trigger: CTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGT...CCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTCTCTCTCTTTCTTGGACAGGTGAAGGTTAAAGGTCAAATGAGTTGTGGGATCACTTGGACTTGTCTCTaGAGGTGGACTTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: FSLFLGQVKVKGQMSCGITWTCL*RWTSVP
Trigger: AGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGT...GATCCCACAACTCATTTGACCTTTAACCTTCACCTGTCCAAGAAAGAGAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp GGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATTATAGGGGGAATGGGTaGATCAAGAACTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: GVLLSHITPCLHPTFCPDYRGNG*IKNLDL
Trigger: CAAGTCCAAGTTCTTGATCCACCCATTCCCCCTATA...ATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp GGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAATCCATGTCATTTTATTaGTCCAAGTCCCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GRDRVRLTQTIERWFWAQSMSFY*SKSLSL
Trigger: CAGAGAAAGGGACTTGGACCAATAAAATGACATGGA...TTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp ACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTGTCATCATAAGCATCTaGCTCATAGAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: TKVGQGQGKANTNNRKMVVIISI*LIEDVA
Trigger: AGCCACATCTTCTATGAGCCAGATGCTTATGATGAC...AACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGTCATCATAAGCATCTaGCTCATAGAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: KVGQGQGKANTNNRKMVLVIISI*LIEDVA
Trigger: AGCCACATCTTCTATGAGCCAGATGCTTATGATGAC...CAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAATCTAATCAAATCTaGCCAGTCAAATATCCAGGT +
Preference number: 4 (lower is better)
Translates to: WGRDRVRLTQTIERWFWAQSNQI*PVKYPG
Trigger: ACCTGGATATTTGACTGGCCAGATTTGATTAGATTG...GGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCCAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SLTLPHVFILPSVLMRRCQTIER*FWAQSL
Trigger: AAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTG...GCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGCAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWQTIER*FWAQSL
Trigger: AAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTG...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCAGGTCAAATGAGTTGTaGGATCCACCGGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: DFSPYKVRLINNLLPQPLRSNEL*DPPGVY
Trigger: ATATACCCCCGGTGGATCCCACAACTCATTTGACCT...GAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576496.5
ENST00000671885.1
3UTR CAA 72 bp CATTCAGGCAACCTGTTAGGCCTCCATGTCATTTTATaGGTCCAAGTCCCTTTCTCTGACCTCCATGTTAGA +
Preference number: 4 (lower is better)
Translates to: HSGNLLGLHVIL*VQVPFSDLHVR
Trigger: TCTAACATGGAGGTCAGAGAAAGGGACTTGGACCAATAAAATGACATGGAGGCCTAACAGGTTGCCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: FSPYKVRLINNLLPQPLHTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...ATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATACAGTGCAGATTTCTTaGCAAGCGCCTTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LDLSLEVDFSPYKVRLINTVQIS*QAPSRD
Trigger: GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGT...ATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp ATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: MGGSRTWTCLWRWTSVPIKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...TATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp CCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCCCAAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: PYKVRLINNLLPQPLHGPKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...TGGGCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR TCA 90 bp TTTTATTTTCTCTCCCGTGACCAGATACTAAACTACATTTCCTTGTTCTGGCCTGGCCTCCTCAGTTTTTaGCCAGTTGAGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FYFLSRDQILNYISLFWPGLLSF*PVERVS
Trigger: AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCC...AGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571146.2
ENST00000572104.2
ENST00000672061.1
ENST00000673102.1
CDS-3UTR TCA 90 bp TTTTATTTTCTCTCCCGTGACCAGATACTAAACTACATTTCCTTGTTCTGGCCTGAAGTAGCAGCCAGCTaGGTGAATCGAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: FYFLSRDQILNYISLFWPEVAAS*VNREQW
Trigger: CCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTC...AGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571146.2
ENST00000572104.2
ENST00000672061.1
ENST00000673102.1
CDS-3UTR TCA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGTTATTTTCTCTCCCGTaGCCAGATACTAAACTACAT +
Preference number: 4 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWLFSLP*PDTKLH
Trigger: ATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAA...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp TTTTATTTTCTCTCCCGTGACCAGATACTAAACTACATTTCCTTGTTCTGGCCTCAGGATCTGTCCTCTTaGACATGGCTCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: FYFLSRDQILNYISLFWPQDLSS*TWLSRL
Trigger: GAGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTG...AGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571146.2
ENST00000572104.2
ENST00000672061.1
ENST00000673102.1
CDS-3UTR CCA 90 bp GACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: DFSPYKVRLINNLLPQPLFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...GAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp GACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCACTTGTCTCTGGAGGTaGACTTCAGTCCCTATAAAG +
Preference number: 4 (lower is better)
Translates to: DFSPYKVRLINNLLPQPLTCLWR*TSVPIK
Trigger: CTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGT...GAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp CAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCGTCATCATAAGCATCTaGCTCATAGAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: QGKANTNNRKMVLGPKSSVIISI*LIEDVA
Trigger: AGCCACATCTTCTATGAGCCAGATGCTTATGATGAC...GGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGCAATCTAATCAAATCTaGCCAGTCAAATATCCAGGT +
Preference number: 4 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWQSNQI*PVKYPG
Trigger: ACCTGGATATTTGACTGGCCAGATTTGATTAGATTG...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGCAATCTAATCAAATCTaGCCAGTCAAATATCCAGGT +
Preference number: 4 (lower is better)
Translates to: YSGIHVPRSQPYFSELNWQSNQI*PVKYPG
Trigger: ACCTGGATATTTGACTGGCCAGATTTGATTAGATTG...CCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp GGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTCAATCTAATCAAATCTaGCCAGTCAAATATCCAGGT +
Preference number: 4 (lower is better)
Translates to: GTGVFYSLTLPHVFILPSQSNQI*PVKYPG
Trigger: ACCTGGATATTTGACTGGCCAGATTTGATTAGATTG...AGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp CAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCAAACCAGCCGATTGTTaGTATCAGAGTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: QGKANTNNRKMVLGPKSSKPADC*YQSQNL
Trigger: AAGGTTTTGACTCTGATATCAACAATCGGCTGGTTT...GGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR TCA 90 bp TTTTATTTTCTCTCCCGTGACCAGATACTAAACTACATTTCCTTGTTCTGGCCTAATCGAGAGCAATGGTaGCAGGAACAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: FYFLSRDQILNYISLFWPNREQW*QEQDLS
Trigger: GGACAGATCCTGTTCCTGTCACCATTGCTCTCGATT...AGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571146.2
ENST00000572104.2
ENST00000672061.1
ENST00000673102.1
CDS-3UTR TCA 90 bp TACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTTATTTTCTCTCCCGTaGCCAGATACTAAACTACAT +
Preference number: 4 (lower is better)
Translates to: YSLTLPHVFILPSVLMRRLFSLP*PDTKLH
Trigger: ATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAA...GCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR GCA 90 bp AATTACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCGACATAAAGGTCCTCTaGCATTATAGGGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: NYNLIKSGQSNIQVVIWVDIKVL*HYRGNG
Trigger: CCCATTCCCCCTATAATGGCAGAGGACCTTTATGTC...GACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATTTTTCAGAACTGAACTaGAAGGGCAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: LDLSLEVDFSPYKVRLINFSELN*KGRIRL
Trigger: TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAA...ATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp GACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACACTTGTCTCTGGAGGTaGACTTCAGTCCCTATAAAG +
Preference number: 4 (lower is better)
Translates to: DLSLEVDFSPYKVRLINNTCLWR*TSVPIK
Trigger: CTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGT...GTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp ATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTCCATGTCATTTTATTaGTCCAAGTCCCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: IKNLDLSLEVDFSPYKVRSMSFY*SKSLSL
Trigger: CAGAGAAAGGGACTTGGACCAATAAAATGACATGGA...CCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp GAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAAGTCATCATAAGCATCTaGCTCATAGAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: EVDFSPYKVRLINNLLPQVIISI*LIEDVA
Trigger: AGCCACATCTTCTATGAGCCAGATGCTTATGATGAC...TTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTAGTCATCATAAGCATCTaGCTCATAGAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLGTGVFYSLTLPHVFILVIISI*LIEDVA
Trigger: AGCCACATCTTCTATGAGCCAGATGCTTATGATGAC...TAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp TCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCTTCAATCTAATCAAATCTaGCCAGTCAAATATCCAGGT +
Preference number: 4 (lower is better)
Translates to: SHITPCLHPTFCPDETLLQSNQI*PVKYPG
Trigger: ACCTGGATATTTGACTGGCCAGATTTGATTAGATTG...AAGCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RDRVRLTQTIERWFWAQSQTIER*FWAQSL
Trigger: AAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTG...ACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGGTCATCATAAGCATCTaGCTCATAGAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: NLIKSGQSNIQVVIWVFLVIISI*LIEDVA
Trigger: AGCCACATCTTCTATGAGCCAGATGCTTATGATGAC...CAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR CCA 90 bp AATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGGTCCACAATCTAATCAAATCTaGCCAGTCAAATATCCAGGT +
Preference number: 4 (lower is better)
Translates to: NQIWPVKYPGRHLGLLGPQSNQI*PVKYPG
Trigger: ACCTGGATATTTGACTGGCCAGATTTGATTAGATTG...TGGACCAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR CCA 90 bp GGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATCAATCTAATCAAATCTaGCCAGTCAAATATCCAGGT +
Preference number: 4 (lower is better)
Translates to: GVLLSHITPCLHPTFCPDQSNQI*PVKYPG
Trigger: ACCTGGATATTTGACTGGCCAGATTTGATTAGATTG...ATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp GAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: EVDFSPYKVRLINNLLPQQTIER*FWAQSL
Trigger: AAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTG...TTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp AATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGTCCATGTCATTTTATTaGTCCAAGTCCCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NLIKSGQSNIQVVIWVFLSMSFY*SKSLSL
Trigger: CAGAGAAAGGGACTTGGACCAATAAAATGACATGGA...CAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CCA 90 bp TTTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTCAATCTAATCAAATCTaGCCAGTCAAATATCCAGGT +
Preference number: 4 (lower is better)
Translates to: FIRYGGVLLSHITPCLHPQSNQI*PVKYPG
Trigger: ACCTGGATATTTGACTGGCCAGATTTGATTAGATTG...AGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CCA 90 bp AATTACAATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCCAAACAATAGAAAGATaGTTCTGGGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: NYNLIKSGQSNIQVVIWVQTIER*FWAQSL
Trigger: AAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTG...GACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATTGTAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR TCA 90 bp TTTTATTTTCTCTCCCGTGACCAGATACTAAACTACATTTCCTTGTTCTGGCCTTTATTTTCTCTCCCGTaGCCAGATACTAAACTACAT +
Preference number: 4 (lower is better)
Translates to: FYFLSRDQILNYISLFWPLFSLP*PDTKLH
Trigger: ATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAA...AGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571146.2
ENST00000572104.2
ENST00000672061.1
ENST00000673102.1
CDS TCA 90 bp CCAACTCGCGTCCGGTCCCTGCTCTGGCGCCCTCTGATGGCGTCATaGCCCAGTGTCCTTCCTCCTCGGGGTGAAACGGGCCGAGCACTC +
Preference number: 5 (lower is better)
Translates to: PTRVRSLLWRPLMAS*PSVLPPRGETGRAL
Trigger: GAGTGCTCGGCCCGTTTCACCCCGAGGAGGAAGGACACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCAGGGACCGGACGCGAGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570500.5
ENST00000573513.5
ENST00000573657.5
ENST00000573699.5
ENST00000574255.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672410.1
ENST00000672457.1
ENST00000672545.1
ENST00000673019.1
ENST00000673277.1
ENST00000673309.1
ENST00000673570.1
ENST00000673612.1
CDS-3UTR CAA 90 bp GGTCAGTTGGGCGCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: GQLGAVGASDTGCGPRPGAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...GCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGCGCCCAACTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CAA 90 bp ACACAGGATGTGGGCCGAGGCCTGGCCCATGGTACCGCCCAGGGTCACCTCAGTACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: TQDVGRGLAHGTAQGHLSTESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...ACTGAGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CAA 90 bp GCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCCATGGTACCGCACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: AVGASDTGCGPRPGPWYRTGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...GCGGTACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS TCA 90 bp GTCCAACATCTCCAACTCGCGTCCGGTCCCTGCTCTGGCGCCCTCTaGTGGCGTCATGACCCAGTGTCCTTCCTCCTCGGGGTGAAACGG +
Preference number: 5 (lower is better)
Translates to: VQHLQLASGPCSGAL*WRHDPVSFLLGVKR
Trigger: CCGTTTCACCCCGAGGAGGAAGGACACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCAGGGACCGGACGCGAGTTGGAGATGTTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570500.5
ENST00000573513.5
ENST00000573657.5
ENST00000573699.5
ENST00000574255.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672410.1
ENST00000672457.1
ENST00000672545.1
ENST00000673019.1
ENST00000673277.1
ENST00000673309.1
ENST00000673570.1
ENST00000673612.1
CDS-3UTR CAA 90 bp CCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGAACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PSVLMRRCFLAHKAGLHRTESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...TCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp GCTGTCGGGGCCTCCGACACAGGATGTGGGCCGAGGCCTGGCCCATGGTACCGCTCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: AVGASDTGCGPRPGPWYRSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...GCGGTACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCCCGACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CAA 90 bp TATGAGGATCGGAGTAGGGCTGGGACTCTACAGAGGGCCCCTCTTGGAGATCCAACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: YEDRSRAGTLQRAPLGDPTESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...TGGATCTCCAAGAGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CAA 90 bp CCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCAGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: PTFCPDETLLPGSQGGAPAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...TGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp ATCCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: ILPSVLMRRCFLAHKAGLAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...GAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp TCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: SMAQMLGSTQGSTYPGPNAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...GTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS TCA 90 bp AGTAGGGCTGGGACTCTACAGAGGGCCCCTCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGAACCACTGAGTCAGGACAAGAGTCC +
Preference number: 5 (lower is better)
Translates to: SRAGTLQRAPLGDPG*SPEGWRTTESGQES
Trigger: GGACTCTTGTCCTGACTCAGTGGTTCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAGAGGGGCCCTCTGTAGAGTCCCAGCCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572104.2
ENST00000673102.1
CDS-3UTR CAA 90 bp TCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: SVLMRRCFLAHKAGLHRQAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...TTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp CCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCAACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: PTFCPDETLLPGSQGGAPTGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...TGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp AACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: NNRKMVLGPKSSRAPSNYTESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...GTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp TGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: WGRDRVRLTQTIERWFWATESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...GGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPTESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS TCA 90 bp ATGAGGGGAAACAATGAAGGAGGGGTCTCACCAGGACAAGAGTCCTaGTGGCTCACAGCATGCAGGACCTGGCAGAGTGTGGTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: MRGNNEGGVSPGQES*WLTACRTWQSVVQG
Trigger: TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGGTGAGACCCCTCCTTCATTGTTTCCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000573657.5
ENST00000574255.5
ENST00000673277.1
ENST00000673309.1
CDS CCA 90 bp ATCATAAGCATCTGGCTCATAGAAGATGTGGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGCCTGCTGTCGGGGGTATATGAGGAT +
Preference number: 5 (lower is better)
Translates to: IISIWLIEDVAGSLP*PRPQESLLSGVYED
Trigger: ATCCTCATATACCCCCGACAGCAGGCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACATCTTCTATGAGCCAGATGCTTATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570322.5
ENST00000673286.1
CDS-3UTR CAA 90 bp TCCATGGCCCAGATGCTGGGATCTACTCAGGGATCCACGTACCCAGGTCCCAACACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: SMAQMLGSTQGSTYPGPNTGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...GTTGGGACCTGGGTACGTGGATCCCTGAGTAGATCCCAGCATCTGGGCCATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp CTACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LLRDPRTQVPTLLFRTELTESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...CAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp AAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: KDGSGPKVFPRPLQLQSNTESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...ATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp AGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RYGGVLLSHITPCLHPTFTESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...GAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWTESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp GCCCAGGCCCAGGGTGCTCTGGGGACAACTGGAGCTGTGACCCAAGGGTATAAGATCAAGAACTTGGACTaGTCTCTGGAGGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: AQAQGALGTTGAVTQGYKIKNLD*SLEVDF
Trigger: GAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT...CTTATACCCTTGGGTCACAGCTCCAGTTGTCCCCAGAGCACCCTGGGCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp ATCCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCGGGTGGATCAAGAACTaGGACTTGTCTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ILPSVLMRRCFLAHKAGLGWIKN*DLSLEV
Trigger: CACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC...GAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp CTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCTGGCGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: LGPKSSRAPSNYNLIKSGAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...GCCAGATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp ATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: MGGSRTWTCLWRWTSVPITESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...TATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp TGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: WGRDRVRLTQTIERWFWAAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...GGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp AGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: RDPRTQVPTLLFRTELEGAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...CCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp ATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: IKNLDLSLEVDFSPYKVRTESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...CCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp CTCTTTCTTGGACAGGTGAAGGTTAAAGGTCAAATGAGTTGTGGGATCCACCTGACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LFLGQVKVKGQMSCGIHLTESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...CAGGTGGATCCCACAACTCATTTGACCTTTAACCTTCACCTGTCCAAGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp ATCCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCTTAATCAATAACCTGTaGCCCCAACCTCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: ILPSVLMRRCFLAHKAGLLINNL*PQPLHG
Trigger: GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAA...GAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS CCA 90 bp ATCATAAGCATCTGGCTCATAGAAGATGTGGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGCCTGCTGTTTTTCAGAACTGAACTG +
Preference number: 5 (lower is better)
Translates to: IISIWLIEDVAGSLP*PRPQESLLFFRTEL
Trigger: CAGTTCAGTTCTGAAAAACAGCAGGCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACATCTTCTATGAGCCAGATGCTTATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1
CDS-3UTR CAA 90 bp CTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: LSHITPCLHPTFCPDETLAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...CAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp CTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: LRDPRTQVPTLLFRTELEAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...TTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp ATCCTACCTTCTGTCCTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCTCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: ILPSVLMRRCFLAHKAGLSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...GAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAGGACAGAAGGTAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp ATACCGGGGGTATATGAGGATCGGAGTAGGGCTGGGACTCTACAGAGGGCCCCTTCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: IPGVYEDRSRAGTLQRAPSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...AGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATATACCCCCGGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000571146.2
ENST00000672061.1
CDS-3UTR CAA 90 bp CTGATGAGACGCTGCTTCCTGGCTCACAAGGCGGGGCTCCATAGACAAGGGGAATCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LMRRCFLAHKAGLHRQGESVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...TTCCCCTTGTCTATGGAGCCCCGCCTTGTGAGCCAGGAAGCAGCGTCTCATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp GGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: GWIKNLDLSLEVDFSPYKAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...TTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp AGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: RLTQTIERWFWAQSLPAPTGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...GGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp GGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: GSGPKVFPRPLQLQSNQITGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...GATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp AGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: RDPRTQVPTLLFRTELEGTGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...CCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp AACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: NNRKMVLGPKSSRAPSNYTGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...GTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp TTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATACTGAGTCTGGTCAGTaGGGCGCTGTCGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: FSPYKVRLINNLLPQPLHTESGQ*GAVGAS
Trigger: GGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGT...ATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp CGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCGGGTGGATCAAGAACTaGGACTTGTCTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: RGCSTLSHYPMSSSYLLSGWIKN*DLSLEV
Trigger: CACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC...GGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp AACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACCTGAGAAGGGAAGATTaGGTGCTGGTGAGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: NNRKMVLGPKSSRAPSNYLRRED*VLVRVA
Trigger: AGCTACCCTCACCAGCACCAAATCTTCCCTTCTCAG...GTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp CCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGCAGGATCAGGCTACTGAGAAGGGAAGATTaGGTGCTGGTGAGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: PRSQPYFSELNWKGRIRLLRRED*VLVRVA
Trigger: AGCTACCCTCACCAGCACCAAATCTTCCCTTCTCAG...TAGCCTGATCCTGCCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp GGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: GVFYSLTLPHVFILPSVLTGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...CAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp GGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: GRDRVRLTQTIERWFWAQTGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...TTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGGGTGGATCAAGAACTaGGACTTGTCTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWGWIKN*DLSLEV
Trigger: CACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp GGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGGGTGGATCAAGAACTaGGACTTGTCTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: GTGVFYSLTLPHVFILPSGWIKN*DLSLEV
Trigger: CACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC...AGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp GGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTCTGAGAAGGGAAGATTaGGTGCTGGTGAGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: GTGVFYSLTLPHVFILPSLRRED*VLVRVA
Trigger: AGCTACCCTCACCAGCACCAAATCTTCCCTTCTCAG...AGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp CTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAACTGAGAAGGGAAGATTaGGTGCTGGTGAGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: LRDPRTQVPTLLFRTELELRRED*VLVRVA
Trigger: AGCTACCCTCACCAGCACCAAATCTTCCCTTCTCAG...TTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp GGTTCTGGGCCCAAAGTCTTCCCGCGCCCCCTCCAATTACAATCTAATCAAATCCACAGTGCAGATTTCTaGACAAGCGCCTTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: GSGPKVFPRPLQLQSNQIHSADF*TSAFKR
Trigger: TCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGTG...GATTTGATTAGATTGTAATTGGAGGGGGCGCGGGAAGACTTTGGGCCCAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp TTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTAGCCCAGGATATGCACTaGCTCCCCACACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: LLGTGVFYSLTLPHVFILAQDMH*LPTQCR
Trigger: TCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGC...TAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp ATGGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: MGGSRTWTCLWRWTSVPITGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...TATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp ATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: IRYGGVLLSHITPCLHPTTGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...GGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp AGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGAAGGGATCAAGAACTTGGACTaGTCTCTGGAGGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: RDPRTQVPTLLFRTELEGIKNLD*SLEVDF
Trigger: GAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT...CCCTTCCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp CCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCCATGGCCCAGGGTGGATCAAGAACTaGGACTTGTCTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PYKVRLINNLLPQPLHGPGWIKN*DLSLEV
Trigger: CACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC...TGGGCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp TACTCAGGGATCCACGTACCCAGGTCCCAACCTTACTTTTCAGAACTGAACTGGCACAGTGCAGATTTCTaGACAAGCGCCTTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: YSGIHVPRSQPYFSELNWHSADF*TSAFKR
Trigger: TCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGTG...CCAGTTCAGTTCTGAAAAGTAAGGTTGGGACCTGGGTACGTGGATCCCTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000571146.2
ENST00000574993.5
ENST00000672061.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp CTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCACAGTGCAGATTTCTaGACAAGCGCCTTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: LSHITPCLHPTFCPDETLHSADF*TSAFKR
Trigger: TCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGTG...CAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp GGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCATCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GQGQGKANTNNRKMVLGPSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...TGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp ATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: IKNLDLSLEVDFSPYKVRTGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...CCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp AGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCAGGGTAGCTAACAGGTaGGGTCTGGATACTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RYGGVLLSHITPCLHPTFRVANR*GLDTFF
Trigger: GAAGAAAGTATCCAGACCCAACCTGTTAGCTACCCT...GAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp ACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCACAGTGCAGATTTCTaGACAAGCGCCTTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: TKVGQGQGKANTNNRKMVHSADF*TSAFKR
Trigger: TCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGTG...AACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp GGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTTCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GTGVFYSLTLPHVFILPSSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...AGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp GAACCAAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: EPRWGRDRVRLTQTIERWSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...CCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp AGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGTCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RWGRDRVRLTQTIERWFWSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...CCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp GACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: DFSPYKVRLINNLLPQPLTGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...GAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp TCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCTGCTTTTAATCAATAACCTGTaGCCCCAACCTCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: SHITPCLHPTFCPDETLLLINNL*PQPLHG
Trigger: GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAA...AAGCAGCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp TACTCTCTCACATTACCCCATGTCTTCATCCTACCTTCTGTCCTGATGAGACGCATCAAGAACTTGGACTaGTCTCTGGAGGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: YSLTLPHVFILPSVLMRRIKNLD*SLEVDF
Trigger: GAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT...GCGTCTCATCAGGACAGAAGGTAGGATGAAGACATGGGGTAATGTGAGAGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp AAGGTGGGGCAGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGTCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: KVGQGQGKANTNNRKMVLSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...CAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCTGCCCCACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp GGGTGGATCAAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAATCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GWIKNLDLSLEVDFSPYKSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...TTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp CTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCTTAATCAATAACCTGTaGCCCCAACCTCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: LEVDFSPYKVRLINNLLPLINNL*PQPLHG
Trigger: GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAA...GGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp AATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGGTCCAATCAAGAACTTGGACTaGTCTCTGGAGGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: NQIWPVKYPGRHLGLLGPIKNLD*SLEVDF
Trigger: GAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT...TGGACCAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp GACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACGGGTGGATCAAGAACTaGGACTTGTCTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: DLSLEVDFSPYKVRLINNGWIKN*DLSLEV
Trigger: CACCTCCAGAGACAAGTCCAAGTTCTTGATCCACCC...GTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp CAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTCTTCCAGGGTAGCTAACAGGTaGGGTCTGGATACTTTCTTC +
Preference number: 5 (lower is better)
Translates to: QGKANTNNRKMVLGPKSSRVANR*GLDTFF
Trigger: GAAGAAAGTATCCAGACCCAACCTGTTAGCTACCCT...GGAAGACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp CTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCAGGGTAGCTAACAGGTaGGGTCTGGATACTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LEVDFSPYKVRLINNLLPRVANR*GLDTFF
Trigger: GAAGAAAGTATCCAGACCCAACCTGTTAGCTACCCT...GGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp TTTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTCACAGTGCAGATTTCTaGACAAGCGCCTTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: FIRYGGVLLSHITPCLHPHSADF*TSAFKR
Trigger: TCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGTG...AGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp AATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGGTCCATCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: NQIWPVKYPGRHLGLLGPSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...TGGACCAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000570322.5
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
CDS-3UTR CAA 90 bp AGGGACAGGGTAAGGCTAACACAAACAATAGAAAGATGGTTCTGGGCCCAAAGTTCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RDRVRLTQTIERWFWAQSSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...ACTTTGGGCCCAGAACCATCTTTCTATTGTTTGTGTTAGCCTTACCCTGTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp GACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAACCTCTCTTAATCAATAACCTGTaGCCCCAACCTCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: DFSPYKVRLINNLLPQPLLINNL*PQPLHG
Trigger: GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAA...GAGAGGTTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp AAGAACTTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTATTAATCAATAACCTGTaGCCCCAACCTCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: KNLDLSLEVDFSPYKVRLLINNL*PQPLHG
Trigger: GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAA...TAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp GAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATAACCTGTTGCCCCAAATCAAGAACTTGGACTaGTCTCTGGAGGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: EVDFSPYKVRLINNLLPQIKNLD*SLEVDF
Trigger: GAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT...TTGGGGCAACAGGTTATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp TTTATTAGGTACGGGGGTGTTCTACTCTCTCACATTACCCCATGTCTTCATCCTTCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: FIRYGGVLLSHITPCLHPSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...AGGATGAAGACATGGGGTAATGTGAGAGAGTAGAACACCCCCGTACCTAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570322.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672545.1
ENST00000673019.1
ENST00000673286.1
ENST00000673570.1
CDS-3UTR CAA 90 bp TTTTATTTTCTCTCCCGTGACCAGATACTAAACTACATTTCCTTGTTCTGGCCTACAGGATCTGTCCTCTaGCACATGGCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: FYFLSRDQILNYISLFWPTGSVL*HMALKA
Trigger: AGCCTTGAGAGCCATGTGCAAGAGGACAGATCCTGT...AGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571146.2
ENST00000572104.2
ENST00000672061.1
ENST00000673102.1
CDS-3UTR CAA 90 bp TTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATTTAATCAATAACCTGTaGCCCCAACCTCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: LDLSLEVDFSPYKVRLINLINNL*PQPLHG
Trigger: GCCATGGAGAGGTTGGGGCAACAGGTTATTGATTAA...ATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp TTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATATCAAGAACTTGGACTaGTCTCTGGAGGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: LDLSLEVDFSPYKVRLINIKNLD*SLEVDF
Trigger: GAAGTCCACCTCCAGAGACAAGTCCAAGTTCTTGAT...ATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp AATCTAATCAAATCTGGCCAGTCAAATATCCAGGTCGTCATCTGGGTCTTCTTGAGGGTAGCTAACAGGTaGGGTCTGGATACTTTCTTC +
Preference number: 5 (lower is better)
Translates to: NLIKSGQSNIQVVIWVFLRVANR*GLDTFF
Trigger: GAAGAAAGTATCCAGACCCAACCTGTTAGCTACCCT...CAAGAAGACCCAGATGACGACCTGGATATTTGACTGGCCAGATTTGATTAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp TTGGACTTGTCTCTGGAGGTGGACTTCAGTCCCTATAAAGTCAGGTTAATCAATTCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LDLSLEVDFSPYKVRLINSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...ATTGATTAACCTGACTTTATAGGGACTGAAGTCCACCTCCAGAGACAAGTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356683.6
ENST00000574993.5
ENST00000576496.5
ENST00000671885.1
ENST00000672545.1
ENST00000673019.1
CDS-3UTR CAA 90 bp TTTTATTTTCTCTCCCGTGACCAGATACTAAACTACATTTCCTTGTTCTGGCCTTCAGTTTTTGACCAGTaGAGAGGGTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: FYFLSRDQILNYISLFWPSVFDQ*RGSLKK
Trigger: CTTCTTCAGAGACCCTCTCAACTGGTCAAAAACTGA...AGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571146.2
ENST00000572104.2
ENST00000672061.1
ENST00000673102.1
CDS TCA 72 bp GTCCGGTCCCTGCTCTGGCGCCCTCTGATGGCGTCATaGCCCAGTGTCCTTCCTCCTCGGGGTGAAACGGGC +
Preference number: 6 (lower is better)
Translates to: VRSLLWRPLMAS*PSVLPPRGETG
Trigger: GCCCGTTTCACCCCGAGGAGGAAGGACACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCAGGGACCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570500.5
ENST00000573513.5
ENST00000573657.5
ENST00000573699.5
ENST00000574255.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672410.1
ENST00000672457.1
ENST00000672545.1
ENST00000673019.1
ENST00000673277.1
ENST00000673309.1
ENST00000673570.1
ENST00000673612.1
CDS TCA 72 bp CTCCAACTCGCGTCCGGTCCCTGCTCTGGCGCCCTCTaGTGGCGTCATGACCCAGTGTCCTTCCTCCTCGGG +
Preference number: 6 (lower is better)
Translates to: LQLASGPCSGAL*WRHDPVSFLLG
Trigger: CCCGAGGAGGAAGGACACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCAGGGACCGGACGCGAGTTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570500.5
ENST00000573513.5
ENST00000573657.5
ENST00000573699.5
ENST00000574255.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672410.1
ENST00000672457.1
ENST00000672545.1
ENST00000673019.1
ENST00000673277.1
ENST00000673309.1
ENST00000673570.1
ENST00000673612.1
CDS TCA 72 bp GATGGCGTCATGACCCAGTGTCCTTCCTCCTCGGGGTaGAACGGGCCGAGCACTCGGGCGTCCTCCCACCAT +
Preference number: 6 (lower is better)
Translates to: DGVMTQCPSSSG*NGPSTRASSHH
Trigger: ATGGTGGGAGGACGCCCGAGTGCTCGGCCCGTTTCACCCCGAGGAGGAAGGACACTGGGTCATGACGCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000354429.6
ENST00000356683.6
ENST00000396627.6
ENST00000396628.6
ENST00000570500.5
ENST00000573513.5
ENST00000573657.5
ENST00000573699.5
ENST00000574255.5
ENST00000574993.5
ENST00000671820.1
ENST00000671829.1
ENST00000672410.1
ENST00000672457.1
ENST00000672545.1
ENST00000673019.1
ENST00000673277.1
ENST00000673309.1
ENST00000673570.1
ENST00000673612.1
CDS TCA 72 bp GGGACTCTACAGAGGGCCCCTCTTGGAGATCCAGGCTaGAGTCCGGAAGGATGGAGAACCACTGAGTCAGGA +
Preference number: 6 (lower is better)
Translates to: GTLQRAPLGDPG*SPEGWRTTESG
Trigger: TCCTGACTCAGTGGTTCTCCATCCTTCCGGACTTCAGCCTGGATCTCCAAGAGGGGCCCTCTGTAGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572104.2
ENST00000673102.1
CDS CCA 72 bp ATCTGGCTCATAGAAGATGTGGCTGGTAGCCTGCCCTaGCCTAGGCCGCAGGAGAGCCTGCTGTTTTTCAGA +
Preference number: 6 (lower is better)
Translates to: IWLIEDVAGSLP*PRPQESLLFFR
Trigger: TCTGAAAAACAGCAGGCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACATCTTCTATGAGCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354429.6
ENST00000396627.6
ENST00000396628.6
ENST00000671820.1
ENST00000671829.1
ENST00000673570.1