RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000134014

Ensembl transcript IDs: ENST00000256398.13, ENST00000380353.8, ENST00000517975.1, ENST00000518112.5, ENST00000519261.5, ENST00000520110.5, ENST00000520270.5, ENST00000520288.5, ENST00000521015.5, ENST00000521099.1, ENST00000521570.5, ENST00000521938.5, ENST00000522063.1, ENST00000523357.5, ENST00000523687.5, ENST00000523760.5, ENST00000524103.5, ENST00000537665.2

Found 659 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCATCGCCGTCTCGGATGGTAGACTCCCGCCTGGGAGAGGCTGCTaGCTGGCTGCTGCCAGGCTCACACCCCCACAACTGCAATTCCTC +
Preference number: 1 (lower is better)
Translates to: VIAVSDGRLPPGRGC*LAAARLTPPQLQFL
Trigger: GAGGAATTGCAGTTGTGGGGGTGTGAGCCTGGCAGCAGCCAGCCAGCAGCCTCTCCCAGGCGGGAGTCTACCATCCGAGACGGCGATGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR CCA 90 bp TCGCCGTCTCGGATGGTAGACTCCCGCCTGGGAGAGGCTGCTGGCTaGCTGCTGCCAGGCTCACACCCCCACAACTGCAATTCCTCTTTC +
Preference number: 1 (lower is better)
Translates to: SPSRMVDSRLGEAAG*LLPGSHPHNCNSSF
Trigger: GAAAGAGGAATTGCAGTTGTGGGGGTGTGAGCCTGGCAGCAGCCAGCCAGCAGCCTCTCCCAGGCGGGAGTCTACCATCCGAGACGGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR GCA 90 bp TTTGTCATCGCCGTCTCGGATGGTAGACTCCCGCCTGGGAGAGGCTaGTGGCTGGCTGCTGCCAGGCTCACACCCCCACAACTGCAATTC +
Preference number: 1 (lower is better)
Translates to: FVIAVSDGRLPPGRG*WLAAARLTPPQLQF
Trigger: GAATTGCAGTTGTGGGGGTGTGAGCCTGGCAGCAGCCAGCCAGCAGCCTCTCCCAGGCGGGAGTCTACCATCCGAGACGGCGATGACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR CCA 90 bp ACTCCACCCGCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTaGGGACCACACTTGGGGCTGCCCACACTGCTCTGTAGTTGCCAA +
Preference number: 1 (lower is better)
Translates to: TPPAQDRQTGKPNAL*GPHLGLPTLLCSCQ
Trigger: TTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGCGGGTGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR GCA 90 bp GACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTaGCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGAAGTAGAGAT +
Preference number: 1 (lower is better)
Translates to: DRQESQTLSGDHTWG*PHCSVVAKRVGSRD
Trigger: ATCTCTACTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR CCA 90 bp AGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTaGGGCTGCCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGAAGT +
Preference number: 1 (lower is better)
Translates to: RIDRQESQTLSGDHT*GCPHCSVVAKRVGS
Trigger: ACTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR GCA 90 bp TTAGTAGGATCCCGGCTGCTCACAGGGACCACACTCCCATACACATaGAGCTCTCGTACTATGGAGACACCTCCACCCAATTCGAAACGG +
Preference number: 1 (lower is better)
Translates to: LVGSRLLTGTTLPYT*SSRTMETPPPNSKR
Trigger: CCGTTTCGAATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAGCAGCCGGGATCCTACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR GCA 90 bp GAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTGCCCACACTaGTCTGTAGTTGCCAAGAGGGTGGGAAGTAGAGATAACAAAGAA +
Preference number: 1 (lower is better)
Translates to: ESQTLSGDHTWGCPH*SVVAKRVGSRDNKE
Trigger: TTCTTTGTTATCTCTACTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR CCA 90 bp TGCTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATaGAGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTCTGAAC +
Preference number: 1 (lower is better)
Translates to: CSQGPHSHTHAALVL*RHLHPIRNGKFLLN
Trigger: GTTCAGAAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR GCA 90 bp CCGAGGTCTTTCATTCTTGCAAGTGCCAGCTCTCTCAGGTTACCATaGTCTACTCCTGAGCTAACTAAAGGCATTGGAATATCCCTCTGT +
Preference number: 1 (lower is better)
Translates to: PRSFILASASSLRLP*STPELTKGIGISLC
Trigger: ACAGAGGGATATTCCAATGCCTTTAGTTAGCTCAGGAGTAGAGCATGGTAACCTGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR TCA 90 bp CACCAATTCAACCAGGTCACTAGGAGAGTAACTCTTATATCTTCCTaGTTTCCAAAGCTCATAAAGCCCGGTCCCACGAATCACCAGGGT +
Preference number: 1 (lower is better)
Translates to: HQFNQVTRRVTLISS*FPKLIKPGPTNHQG
Trigger: ACCCTGGTGATTCGTGGGACCGGGCTTTATGAGCTTTGGAAATCAGGAAGATATAAGAGTTACTCTCCTAGTGACCTGGTTGAATTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR GCA 90 bp AGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTCTGAACACTTaGGTAATCGTAGGAGGCCAATCAAAATGTCTTGATCTGGGTCTT +
Preference number: 1 (lower is better)
Translates to: RHLHPIRNGKFLLNT*VIVGGQSKCLDLGL
Trigger: AAGACCCAGATCAAGACATTTTGATTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR TCA 90 bp TCTTCTGAACACTTGCGTAATCGTAGGAGGCCAATCAAAATGTCTTaGTCTGGGTCTTCGTATGACAAGAATGTTTCCCAGCCACCATTT +
Preference number: 1 (lower is better)
Translates to: SSEHLRNRRRPIKMS*SGSSYDKNVSQPPF
Trigger: AAATGGTGGCTGGGAAACATTCTTGTCATACGAAGACCCAGATCAAGACATTTTGATTGGCCTCCTACGATTACGCAAGTGTTCAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR TCA 90 bp TCCCCAGGGTATATAAATAAACTACTCTTAAGTTTGCTCCTCGAATaGCAATCAGTTTTATTGCATGAGTTATGGTGTCCAAATGAGTTA +
Preference number: 1 (lower is better)
Translates to: SPGYINKLLLSLLLE*QSVLLHELWCPNEL
Trigger: TAACTCATTTGGACACCATAACTCATGCAATAAAACTGATTGTCATTCGAGGAGCAAACTTAAGAGTAGTTTATTTATATACCCTGGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCCCTGGGAGAGGCTGCTaGCTGGCTGCTGCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGPGRGC*LAAARL
Trigger: GAGCCTGGCAGCAGCCAGCCAGCAGCCTCTCCCAGG...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGGCGGGAGAATCGCTTaGACCCGGGAGGCGGAGGAT +
Preference number: 2 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGGGRIA*TREAED
Trigger: ATCCTCCGCCTCCCGGGTTCAAGCGATTCTCCCGCC...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGCCTGGGAGAGGCTGCTaGCTGGCTGCTGCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQPGRGC*LAAARL
Trigger: GAGCCTGGCAGCAGCCAGCCAGCAGCCTCTCCCAGG...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp GCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGAGGCTGCTGGCTGGCTaGTGCCAGGCTCACACCCCC +
Preference number: 2 (lower is better)
Translates to: AQDRQTGKPNALWGPHLGRLLAG*CQAHTP
Trigger: GGGGGTGTGAGCCTGGCAGCAGCCAGCCAGCAGCCT...CCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp CACACTTGGGGCTGCCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGAAGTAGAAGGCTGCTGGCTGGCTaGTGCCAGGCTCACACCCCC +
Preference number: 2 (lower is better)
Translates to: HTWGCPHCSVVAKRVGSRRLLAG*CQAHTP
Trigger: GGGGGTGTGAGCCTGGCAGCAGCCAGCCAGCAGCCT...TCTACTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCGGCGGATCTGGGGTGTaGTCAGCAGATGACCAGCCG +
Preference number: 2 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPGGSGV*SADDQP
Trigger: CGGCTGGTCATCTGCTGACCACACCCCAGATCCGCC...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR CCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCTCTGGGGACCACACTTaGGGCTGCCCACACTGCTCT +
Preference number: 2 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPSGDHT*GCPHCS
Trigger: AGAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGA...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAAGCCAAACGCTCTCTaGGGACCACACTTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGKPNAL*GPHLGL
Trigger: CAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTT...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEAGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCGGTGGGTTGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPGGLIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCAACCCACC...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 2 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR CCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGCGGATCTGGGGTGTaGTCAGCAGATGACCAGCCG +
Preference number: 2 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEGGSGV*SADDQP
Trigger: CGGCTGGTCATCTGCTGACCACACCCCAGATCCGCC...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR CCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGGGCGGATCTGGGGTGTaGTCAGCAGATGACCAGCCG +
Preference number: 2 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLGGSGV*SADDQP
Trigger: CGGCTGGTCATCTGCTGACCACACCCCAGATCCGCC...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGGTGGGTTGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGGGLIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCAACCCACC...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp ACTCGGTACACTCGAGTCCATGGAGGCACGAGGGCTAGGATCCGAGCCACCAATGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: TRYTRVHGGTRARIRATNDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...ATTGGTGGCTCGGATCCTAGCCCTCGTGCCTCCATGGACTCGAGTGTACCGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR TCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp GCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: AQDRQTGKPNALWGPHLGGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...CCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp CCGGCTGCTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATGGAGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: PAAHRDHTPIHMQLSYYGGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...TCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAGCAGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR CAA 90 bp CAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTaGGGGCTGCCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: QDRQTGKPNALWGPH*GLPTLLCSCQEGGK
Trigger: CTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 2 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCTCACACCCCCACAACTaGAATTCCTCTTTCCCAGTC +
Preference number: 2 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPSHPHN*NSSFPV
Trigger: GACTGGGAAAGAGGAATTGCAGTTGTGGGGGTGTGA...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGACCACACTTGGGGCTaGCCACACTGCTCTGTAGTT +
Preference number: 2 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEDHTWG*PHCSVV
Trigger: AACTACAGAGCAGTGTGGGCAGCCCCAAGTGTGGTC...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTTTTGGCCAGGTGAAATaGCTCACACACTGCCTTCAC +
Preference number: 2 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGFGQVK*LTHCLH
Trigger: GTGAAGGCAGTGTGTGAGTCATTTCACCTGGCCAAA...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR GCA 90 bp CAACCTGAGACTCCACCCGCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGCTGCCCACACTaGTCTGTAGTTGCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: QPETPPAQDRQTGKPNALWGCPH*SVVAKR
Trigger: CCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCA...GAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGCGGGTGGAGTCTCAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp CTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATGGAGACACCTGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: LTGTTLPYTCSSRTMETPDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...AGGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR GCA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGTGGGGCTGCCCACACTaGTCTGTAGTTGCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRWGCPH*SVVAKR
Trigger: CCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCA...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTTGTGGAAGCAAATCTTaGTTTAGGGGCACACAACCT +
Preference number: 2 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGCGSKS*FRGTQP
Trigger: AGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACA...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCTATAATAATTCCTGGTaGCGACCCCTGATATCACAG +
Preference number: 2 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPYNNSW*RPLISQ
Trigger: CTGTGATATCAGGGGTCGGCACCAGGAATTATTATA...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CCA 90 bp AAAATACAAAAATTAGCAGCGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCTCTGGGGACCACACTTaGGGCTGCCCACACTGCTCT +
Preference number: 2 (lower is better)
Translates to: KIQKLAAAGACNPSYSGGSGDHT*GCPHCS
Trigger: AGAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGA...GCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCGCTGCTAATTTTTGTATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp AAAATACAAAAATTAGCAGCGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: KIQKLAAAGACNPSYSGGDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...GCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCGCTGCTAATTTTTGTATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTGCTCCTCGAATaGCAATCAGTTTTATTGCAT +
Preference number: 2 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGSLLLE*QSVLLH
Trigger: ATGCAATAAAACTGATTGTCATTCGAGGAGCAAACT...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp GCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGTTTCCTGTTTCAACCTaGCTTTCTGTCCCCAGGGTA +
Preference number: 2 (lower is better)
Translates to: AQDRQTGKPNALWGPHLGFPVST*LSVPRV
Trigger: TACCCTGGGGACAGAAAGTCAGGTTGAAACAGGAAA...CCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGACAAAGAATGTGGAATaGAGCTCTTTGTCATCGCCG +
Preference number: 2 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDETKNVE*SSLSSP
Trigger: CGGCGATGACAAAGAGCTTCATTCCACATTCTTTGT...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CCA 90 bp AAAATACAAAAATTAGCAGCGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCAAGCCAAACGCTCTCTaGGGACCACACTTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: KIQKLAAAGACNPSYSGGKPNAL*GPHLGL
Trigger: CAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTT...GCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCGCTGCTAATTTTTGTATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CCA 90 bp CTCTGTACTCGGTACACTCGAGTCCATGGAGGCACGAGGGCTAGGATCCGAGCCTGTAAAACTGATGTGTaGACATCTGTGGGGTTTGCA +
Preference number: 2 (lower is better)
Translates to: LCTRYTRVHGGTRARIRACKTDV*TSVGFA
Trigger: TGCAAACCCCACAGATGTCCACACATCAGTTTTACA...GGCTCGGATCCTAGCCCTCGTGCCTCCATGGACTCGAGTGTACCGAGTACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518112.5
ENST00000523687.5
3UTR-3UTR CCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTTTCTATAATAATTCCTaGTGCCGACCCCTTGCAAAG +
Preference number: 2 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGFYNNS*CRPLAK
Trigger: CTTTGCAAGGGGTCGGCACCAGGAATTATTATAGAA...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523357.5
3UTR-3UTR TCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTTTCCAATACACTTTGTaGGGCTTCTCTCAGAATACT +
Preference number: 2 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGFQYTL*GFSQNT
Trigger: AGTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAA...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR GCA 90 bp CACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACTGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 2 (lower is better)
Translates to: HRLSQNRPPAGLMQNVETAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...AGTTTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGTCACACCCCCACAACTaGAATTCCTCTTTCCCAGTC +
Preference number: 2 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRSHPHN*NSSFPV
Trigger: GACTGGGAAAGAGGAATTGCAGTTGTGGGGGTGTGA...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCTGTTTTCCATTGTTTTaGTTTCACACACGGGTTGAA +
Preference number: 2 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPCFPLF*FHTRVE
Trigger: TTCAACCCGTGTGTGAAAGCAAAACAATGGAAAACA...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp CGGCTGCTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATGGAGTCTCTCAGGTTACCATaGTCTACTCCTGAGCTAACT +
Preference number: 2 (lower is better)
Translates to: RLLTGTTLPYTCSSRTMESLRLP*STPELT
Trigger: AGTTAGCTCAGGAGTAGAGCATGGTAACCTGAGAGA...CTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAGCAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGATCTCTGTATTCTTCTaGAAGGGCCATAAACGTTCC +
Preference number: 2 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQISVFF*KGHKRS
Trigger: GGAACGTTTATGGCCCTTCCAGAAGAATACAGAGAT...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR TCA 90 bp CAATCTCCAGCCTTGTGCAGCCATAGGTCAACATGTCACTTAAATGTCGCTTCAGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: QSPALCSHRSTCHLNVASDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...TGAAGCGACATTTAAGTGACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR TCA 90 bp CTTCTGAACACTTGCGTAATCGTAGGAGGCCAATCAAAATGTCTTGATCTGGGTGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: LLNTCVIVGGQSKCLDLGGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...ACCCAGATCAAGACATTTTGATTGGCCTCCTACGATTACGCAAGTGTTCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR GCA 90 bp CCGGCTGCTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATGGATTCCCAGCCACCATTTaGAACATAATCTCTCCTTAC +
Preference number: 2 (lower is better)
Translates to: PAAHRDHTPIHMQLSYYGFPATI*NIISPY
Trigger: GTAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAA...TCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAGCAGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CCA 90 bp CGAAACGGAAAGTTTCTTCTGAACACTTGCGTAATCGTAGGAGGCCAATCAAAAGGCGGATCTGGGGTGTaGTCAGCAGATGACCAGCCG +
Preference number: 2 (lower is better)
Translates to: RNGKFLLNTCVIVGGQSKGGSGV*SADDQP
Trigger: CGGCTGGTCATCTGCTGACCACACCCCAGATCCGCC...TTTTGATTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAACTTTCCGTTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGTGTAAAACTGATGTGTaGACATCTGTGGGGTTTGCA +
Preference number: 2 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQCKTDV*TSVGFA
Trigger: TGCAAACCCCACAGATGTCCACACATCAGTTTTACA...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518112.5
ENST00000523687.5
3UTR-3UTR CCA 90 bp CTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATGGAGACACCTAGGTCAGGCATCATATaGGCCACCACTTTAAAACCG +
Preference number: 2 (lower is better)
Translates to: LTGTTLPYTCSSRTMETPRSGII*ATTLKP
Trigger: CGGTTTTAAAGTGGTGGCCCATATGATGCCTGACCT...AGGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR GCA 90 bp GACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTGCCCACACCTTTCCCAGTCACACTaGTATTTATTTCTAAACATC +
Preference number: 2 (lower is better)
Translates to: DRQESQTLSGDHTWGCPHLSQSH*YLFLNI
Trigger: GATGTTTAGAAATAAATAGCAGTGTGACTGGGAAAG...GTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGATGGGGCTGCCCACACTaGTCTGTAGTTGCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: QVMASVEANLDLGAHNLRWGCPH*SVVAKR
Trigger: CCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCA...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp GAGTCCATGGAGGCACGAGGGCTAGGATCCGAGCCACCAATTCAACCAGGTCACTTAAATGTCGCTTCATaGAGTAATCTGGTCTGGTTT +
Preference number: 2 (lower is better)
Translates to: ESMEARGLGSEPPIQPGHLNVAS*SNLVWF
Trigger: AAACCAGACCAGATTACTGCATGAAGCGACATTTAA...GTGACCTGGTTGAATTGGTGGCTCGGATCCTAGCCCTCGTGCCTCCATGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTCTTCATGCAGTAATCTaGTCTGGTTTCAATAGTAAT +
Preference number: 2 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGLHAVI*SGFNSN
Trigger: ATTACTATTGAAACCAGACCAGATTACTGCATGAAG...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR TCA 90 bp GGCAGGTCAGGCATCATATGGGCCACCACTTTAAAACCGGAATCTTTGGCCAGGGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: GRSGIIWATTLKPESLARVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...CCTGGCCAAAGATTCCGGTTTTAAAGTGGTGGCCCATATGATGCCTGACCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR TCA 90 bp CACACTTGGGGCTGCCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGAAGTAGAAGTTTGCTCCTCGAATaGCAATCAGTTTTATTGCAT +
Preference number: 2 (lower is better)
Translates to: HTWGCPHCSVVAKRVGSRSLLLE*QSVLLH
Trigger: ATGCAATAAAACTGATTGTCATTCGAGGAGCAAACT...TCTACTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp GCAGCTCTCGTACTATGGAGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTGAATCTTTGGCCAGGTaGAATGACTCACACACTGCC +
Preference number: 2 (lower is better)
Translates to: AALVLWRHLHPIRNGKFLESLAR*NDSHTA
Trigger: GGCAGTGTGTGAGTCATTTCACCTGGCCAAAGATTC...AAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR GCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGCTTTCCCAGTCACACTaGTATTTATTTCTAAACATC +
Preference number: 2 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDELSQSH*YLFLNI
Trigger: GATGTTTAGAAATAAATAGCAGTGTGACTGGGAAAG...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CCA 90 bp TCTGGTCTGGTTTCAATAGTAATTCCAATACACTTTGTGAGGCTTCTCTCAGAAGGCGGATCTGGGGTGTaGTCAGCAGATGACCAGCCG +
Preference number: 2 (lower is better)
Translates to: SGLVSIVIPIHFVRLLSEGGSGV*SADDQP
Trigger: CGGCTGGTCATCTGCTGACCACACCCCAGATCCGCC...TTCTGAGAGAAGCCTCACAAAGTGTATTGGAATTACTATTGAAACCAGACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR TCA 90 bp ATGTCTCTTTCTAGTCCCACGTTTGGCAGGTCAGGCATCATATGGGCCACCACTGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: MSLSSPTFGRSGIIWATTVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...AGTGGTGGCCCATATGATGCCTGACCTGCCAAACGTGGGACTAGAAAGAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR TCA 90 bp TGGAGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTCTGAACACTTGCGTAGAATCTTTGGCCAGGTaGAATGACTCACACACTGCC +
Preference number: 2 (lower is better)
Translates to: WRHLHPIRNGKFLLNTCVESLAR*NDSHTA
Trigger: GGCAGTGTGTGAGTCATTTCACCTGGCCAAAGATTC...TACGCAAGTGTTCAGAAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CCA 90 bp GCTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATGGAGACACCCAGTGTAAGACTGGGTaGAATACTCAAAATCAGAAT +
Preference number: 2 (lower is better)
Translates to: AHRDHTPIHMQLSYYGDTQCKTG*NTQNQN
Trigger: ATTCTGATTTTGAGTATTCCACCCAGTCTTACACTG...GGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518112.5
3UTR-3UTR TCA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGAGTTTGCTCCTCGAATaGCAATCAGTTTTATTGCAT +
Preference number: 2 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRSLLLE*QSVLLH
Trigger: ATGCAATAAAACTGATTGTCATTCGAGGAGCAAACT...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR TCA 90 bp GGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTAATCTGTAGCGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: GVAIISASSPCTGLVICSVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...GCTACAGATTACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
3UTR-3UTR TCA 90 bp ATGTCTCTTTCTAGTCCCACGTTTGGCAGGTCAGGCATCATATGGGCCACCACTTTCTCTCAGAATACTTaGCTGCCTCGTAAATATTGT +
Preference number: 2 (lower is better)
Translates to: MSLSSPTFGRSGIIWATTFSQNT*LPRKYC
Trigger: ACAATATTTACGAGGCAGTCAAGTATTCTGAGAGAA...AGTGGTGGCCCATATGATGCCTGACCTGCCAAACGTGGGACTAGAAAGAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR GCA 90 bp ACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTAATCTGTTATAATAATTCCTGGTaGCGACCCCTTGCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: TGVAIISASSPCTGLVICYNNSW*RPLAKC
Trigger: GCACTTTGCAAGGGGTCGGCACCAGGAATTATTATA...ACAGATTACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523357.5
3UTR CAA 90 bp CTTGATCTGGGTCTTCGTATGACAAGAATGTTTCCCAGCCACCATTaGCAACATAATCTCTCCTTACCAATTCAACCTGGTATGGCCGTA +
Preference number: 2 (lower is better)
Translates to: LDLGLRMTRMFPSHH*QHNLSLPIQPGMAV
Trigger: TACGGCCATACCAGGTTGAATTGGTAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAAACATTCTTGTCATACGAAGACCCAGATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR GCA 90 bp TCAATGTCTCTTTCTAGTCCCACGTTTGGCAGGTCAGGCATCATATGGGCCACCGACAATCAGTTTTATTaGATGAGTTATGGTGTCCAA +
Preference number: 2 (lower is better)
Translates to: SMSLSSPTFGRSGIIWATDNQFY*MSYGVQ
Trigger: TTGGACACCATAACTCATGCAATAAAACTGATTGTC...GGTGGCCCATATGATGCCTGACCTGCCAAACGTGGGACTAGAAAGAGACATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CCA 90 bp ATCTCGACACTGTATTCCGAGGTCTTTCATTCTTGCAAGTGCCAGCTCTCTCAGAGCTCTCATGGAGGTTaGACACATATATTTCCTGTA +
Preference number: 2 (lower is better)
Translates to: ISTLYSEVFHSCKCQLSQSSHGG*THIFPV
Trigger: TACAGGAAATATATGTGTCCAACCTCCATGAGAGCT...CTGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCGGAATACAGTGTCGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523687.5
3UTR-3UTR TCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR GCA 90 bp AAAATACAAAAATTAGCAGCGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCGACAATCAGTTTTATTaGATGAGTTATGGTGTCCAA +
Preference number: 2 (lower is better)
Translates to: KIQKLAAAGACNPSYSGGDNQFY*MSYGVQ
Trigger: TTGGACACCATAACTCATGCAATAAAACTGATTGTC...GCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCGCTGCTAATTTTTGTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CCA 90 bp TCTACTCCTGAGCTAACTAAAGGCATTGGAATATCCCTCTGTACTCGGTACACTATCTCTGTATTCTTCTaGAAGGGCCATAAACGTTCC +
Preference number: 2 (lower is better)
Translates to: STPELTKGIGISLCTRYTISVFF*KGHKRS
Trigger: GGAACGTTTATGGCCCTTCCAGAAGAATACAGAGAT...AGTGTACCGAGTACAGAGGGATATTCCAATGCCTTTAGTTAGCTCAGGAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CCA 90 bp CTCCCATACACATGCAGCTCTCGTACTATGGAGACACCTCCACCCAATTCGAAACTTCATGCAGTAATCTaGTCTGGTTTCAATAGTAAT +
Preference number: 2 (lower is better)
Translates to: LPYTCSSRTMETPPPNSKLHAVI*SGFNSN
Trigger: ATTACTATTGAAACCAGACCAGATTACTGCATGAAG...TTTCGAATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR TCA 90 bp TCTACTCCTGAGCTAACTAAAGGCATTGGAATATCCCTCTGTACTCGGTACACTTTCCAATACACTTTGTaGGGCTTCTCTCAGAATACT +
Preference number: 2 (lower is better)
Translates to: STPELTKGIGISLCTRYTFQYTL*GFSQNT
Trigger: AGTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAA...AGTGTACCGAGTACAGAGGGATATTCCAATGCCTTTAGTTAGCTCAGGAGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR TCA 90 bp GTACTATGGAGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTCTGAACACTTTCTCTCAGAATACTTaGCTGCCTCGTAAATATTGT +
Preference number: 2 (lower is better)
Translates to: VLWRHLHPIRNGKFLLNTFSQNT*LPRKYC
Trigger: ACAATATTTACGAGGCAGTCAAGTATTCTGAGAGAA...AGTGTTCAGAAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCATAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR CCA 72 bp GTCTCGGATGGTAGACTCCCGCCTGGGAGAGGCTGCTaGCTGGCTGCTGCCAGGCTCACACCCCCACAACTG +
Preference number: 3 (lower is better)
Translates to: VSDGRLPPGRGC*LAAARLTPPQL
Trigger: CAGTTGTGGGGGTGTGAGCCTGGCAGCAGCCAGCCAGCAGCCTCTCCCAGGCGGGAGTCTACCATCCGAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CAA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGGAGGATGCAGTGAGATaGCGCCACTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQEDAVR*RHCTPA
Trigger: GGCTGGAGTGCAGTGGCGCAATCTCACTGCATCCTC...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR GCA 72 bp GAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTaGCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGA +
Preference number: 3 (lower is better)
Translates to: ESQTLSGDHTWG*PHCSVVAKRVG
Trigger: TCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CAA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTAACGCAAGTGATTTTTaGGGGTGCACGCAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGNASDF*GCTQER
Trigger: CCTCTCCTGCGTGCACCCCAAAAAATCACTTGCGTT...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
3UTR-3UTR CAA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCGCTCATTTTCCTAACTaGCGCTCCAATGCGTATGTC +
Preference number: 3 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGAHFPN*RSNAYV
Trigger: GACATACGCATTGGAGCGCAAGTTAGGAAAATGAGC...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR GCA 72 bp TCCCGGCTGCTCACAGGGACCACACTCCCATACACATaGAGCTCTCGTACTATGGAGACACCTCCACCCAAT +
Preference number: 3 (lower is better)
Translates to: SRLLTGTTLPYT*SSRTMETPPPN
Trigger: ATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAGCAGCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp GCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGAACGCAAGTGATTTTTaGGGGTGCACGCAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: AQDRQTGKPNALWGPHLGNASDF*GCTQER
Trigger: CCTCTCCTGCGTGCACCCCAAAAAATCACTTGCGTT...CCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CAA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGCTCATTTTCCTAACTaGCGCTCCAATGCGTATGTC +
Preference number: 3 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGAHFPN*RSNAYV
Trigger: GACATACGCATTGGAGCGCAAGTTAGGAAAATGAGC...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CAA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCGTTCTATTCGGTGTCTaGTCTGTAGGAAAGGGTCAT +
Preference number: 3 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPVLFGV*SVGKGH
Trigger: ATGACCCTTTCCTACAGACAAGACACCGAATAGAAC...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGGCTCATTTTCCTAACTaGCGCTCCAATGCGTATGTC +
Preference number: 3 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQAHFPN*RSNAYV
Trigger: GACATACGCATTGGAGCGCAAGTTAGGAAAATGAGC...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CAA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCTGGGGACCACACTaGGGGCTGCCCACACTGCTC +
Preference number: 3 (lower is better)
Translates to: QVMASVEANLDLGAHNLRLWGPH*GLPTLL
Trigger: GAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGAG...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CAA 90 bp ATGTCTCTTTCTAGTCCCACGTTTGGCAGGTCAGGCATCATATGGGCCACCACTCCCCAATCTCCAGCCTaGTGCAGCCATAGGTCAACA +
Preference number: 3 (lower is better)
Translates to: MSLSSPTFGRSGIIWATTPQSPA*CSHRST
Trigger: TGTTGACCTATGGCTGCACAAGGCTGGAGATTGGGG...AGTGGTGGCCCATATGATGCCTGACCTGCCAAACGTGGGACTAGAAAGAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGCAATCCTGTTTTCCATaGTTTTGCTTTCACACACGG +
Preference number: 3 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEQSCFP*FCFHTR
Trigger: CCGTGTGTGAAAGCAAAACAATGGAAAACAGGATTG...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
3UTR-3UTR CAA 90 bp CTCCCATACACATGCAGCTCTCGTACTATGGAGACACCTCCACCCAATTCGAAACCCCAATCTCCAGCCTaGTGCAGCCATAGGTCAACA +
Preference number: 3 (lower is better)
Translates to: LPYTCSSRTMETPPPNSKPQSPA*CSHRST
Trigger: TGTTGACCTATGGCTGCACAAGGCTGGAGATTGGGG...TTTCGAATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp CCTGTTGGTGTCTCTAGCCACATCTTCATAAACACTCTGCACCCCAATCTCCAGAACGCAAGTGATTTTTaGGGGTGCACGCAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: PVGVSSHIFINTLHPNLQNASDF*GCTQER
Trigger: CCTCTCCTGCGTGCACCCCAAAAAATCACTTGCGTT...CTGGAGATTGGGGTGCAGAGTGTTTATGAAGATGTGGCTAGAGACACCAACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp ATCTCGACACTGTATTCCGAGGTCTTTCATTCTTGCAAGTGCCAGCTCTCTCAGCCCCAATCTCCAGCCTaGTGCAGCCATAGGTCAACA +
Preference number: 3 (lower is better)
Translates to: ISTLYSEVFHSCKCQLSQPQSPA*CSHRST
Trigger: TGTTGACCTATGGCTGCACAAGGCTGGAGATTGGGG...CTGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCGGAATACAGTGTCGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR CCA 72 bp CTTTCTAGTCCCACGTTTGGCAGGTCAGGCATCATATaGGCCACCACTTTAAAACCGGAATCTTTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: LSSPTFGRSGII*ATTLKPESLAR
Trigger: CCTGGCCAAAGATTCCGGTTTTAAAGTGGTGGCCCATATGATGCCTGACCTGCCAAACGTGGGACTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR CCA 72 bp TCATGGAGGTTGGCTCATAGCCAGTGTAAGACTGGGTaGAATACTCAAAATCAGAATCAGGTCCACCAGGGC +
Preference number: 3 (lower is better)
Translates to: SWRLAHSQCKTG*NTQNQNQVHQG
Trigger: GCCCTGGTGGACCTGATTCTGATTTTGAGTATTCCACCCAGTCTTACACTGGCTATGAGCCAACCTCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518112.5
3UTR CCA 72 bp GGACCACACTCCCATACACATGCAGCTCTCGTACTATaGAGACACCTCCACCCAATTCGAAACGGAAAGTTT +
Preference number: 3 (lower is better)
Translates to: GPHSHTHAALVL*RHLHPIRNGKF
Trigger: AAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp GATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTAACGCAAGTGATTTTTaGGGGTGCACGCAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: DTAEEWTGVAIISASSPCNASDF*GCTQER
Trigger: CCTCTCCTGCGTGCACCCCAAAAAATCACTTGCGTT...ACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp GTGAACTGTTCAATGTCTCTTTCTAGTCCCACGTTTGGCAGGTCAGGCATCATAAACGCAAGTGATTTTTaGGGGTGCACGCAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: VNCSMSLSSPTFGRSGIINASDF*GCTQER
Trigger: CCTCTCCTGCGTGCACCCCAAAAAATCACTTGCGTT...TATGATGCCTGACCTGCCAAACGTGGGACTAGAAAGAGACATTGAACAGTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp CTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATGGAGACACCTTTTCCCAGCCACCATTaGCAACATAATCTCTCCTTA +
Preference number: 3 (lower is better)
Translates to: LTGTTLPYTCSSRTMETPFPSHH*QHNLSL
Trigger: TAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAAA...AGGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp ATCGTAGGAGGCCAATCAAAATGTCTTGATCTGGGTCTTCGTATGACAAGAATGACAGTGTGGCCCCTGTaGGTGTCTCTAGCCACATCT +
Preference number: 3 (lower is better)
Translates to: IVGGQSKCLDLGLRMTRMTVWPL*VSLATS
Trigger: AGATGTGGCTAGAGACACCAACAGGGGCCACACTGT...CATTCTTGTCATACGAAGACCCAGATCAAGACATTTTGATTGGCCTCCTACGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp CAATTCAACCTGGTATGGCCGTACTTTGTGATGAATTTCTTGGATTCCAACTTCACAGTGTGGCCCCTGTaGGTGTCTCTAGCCACATCT +
Preference number: 3 (lower is better)
Translates to: QFNLVWPYFVMNFLDSNFTVWPL*VSLATS
Trigger: AGATGTGGCTAGAGACACCAACAGGGGCCACACTGT...GAAGTTGGAATCCAAGAAATTCATCACAAAGTACGGCCATACCAGGTTGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp GATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTGTTTCTTCTGAACACTaGCGTAATCGTAGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: DTAEEWTGVAIISASSPCVSSEH*RNRRRP
Trigger: TGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAAC...ACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp TCTACTCCTGAGCTAACTAAAGGCATTGGAATATCCCTCTGTACTCGGTACACTGTTCTATTCGGTGTCTaGTCTGTAGGAAAGGGTCAT +
Preference number: 3 (lower is better)
Translates to: STPELTKGIGISLCTRYTVLFGV*SVGKGH
Trigger: ATGACCCTTTCCTACAGACAAGACACCGAATAGAAC...AGTGTACCGAGTACAGAGGGATATTCCAATGCCTTTAGTTAGCTCAGGAGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp GGTATGGCCGTACTTTGTGATGAATTTCTTGGATTCCAACTTCTCTGGTTCTCATTTCTAGTCCCACGTTaGGCAGGTCAGGCATCATAT +
Preference number: 3 (lower is better)
Translates to: GMAVLCDEFLGFQLLWFSFLVPR*AGQASY
Trigger: ATATGATGCCTGACCTGCCAAACGTGGGACTAGAAA...TGAGAACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAAGTACGGCCATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR TCA 72 bp AACCAGGTCACTAGGAGAGTAACTCTTATATCTTCCTaGTTTCCAAAGCTCATAAAGCCCGGTCCCACGAAT +
Preference number: 3 (lower is better)
Translates to: NQVTRRVTLISS*FPKLIKPGPTN
Trigger: ATTCGTGGGACCGGGCTTTATGAGCTTTGGAAATCAGGAAGATATAAGAGTTACTCTCCTAGTGACCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR TCA 72 bp CACTTGCGTAATCGTAGGAGGCCAATCAAAATGTCTTaGTCTGGGTCTTCGTATGACAAGAATGTTTCCCAG +
Preference number: 3 (lower is better)
Translates to: HLRNRRRPIKMS*SGSSYDKNVSQ
Trigger: CTGGGAAACATTCTTGTCATACGAAGACCCAGATCAAGACATTTTGATTGGCCTCCTACGATTACGCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp CAATTCAACCTGGTATGGCCGTACTTTGTGATGAATTTCTTGGATTCCAACTTCTTTCTAGTCCCACGTTaGGCAGGTCAGGCATCATAT +
Preference number: 3 (lower is better)
Translates to: QFNLVWPYFVMNFLDSNFFLVPR*AGQASY
Trigger: ATATGATGCCTGACCTGCCAAACGTGGGACTAGAAA...GAAGTTGGAATCCAAGAAATTCATCACAAAGTACGGCCATACCAGGTTGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR-3UTR CAA 90 bp GCAGCTCTCGTACTATGGAGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTTTTGTGATGAATTTCTaGGATTCCAACTTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: AALVLWRHLHPIRNGKFLFVMNF*DSNFSG
Trigger: ACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAA...AAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR TCA 72 bp GAGGCCAATCAAAATGTCTTGATCTGGGTCTTCGTATaGCAAGAATGTTTCCCAGCCACCATTTGCAACATA +
Preference number: 3 (lower is better)
Translates to: EANQNVLIWVFV*QECFPATICNI
Trigger: TATGTTGCAAATGGTGGCTGGGAAACATTCTTGTCATACGAAGACCCAGATCAAGACATTTTGATTGGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR GCA 72 bp CACCCAATTCGAAACGGAAAGTTTCTTCTGAACACTTaGGTAATCGTAGGAGGCCAATCAAAATGTCTTGAT +
Preference number: 3 (lower is better)
Translates to: HPIRNGKFLLNT*VIVGGQSKCLD
Trigger: ATCAAGACATTTTGATTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAACTTTCCGTTTCGAATTGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCAGGCTGCTGGCTGGCTaGTGCCAGGCTCACACCCCC +
Preference number: 4 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPRLLAG*CQAHTP
Trigger: GGGGGTGTGAGCCTGGCAGCAGCCAGCCAGCAGCCT...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTCCTGGGAGAGGCTGCTaGCTGGCTGCTGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RADLGCGQQMTSRGLEGSPGRGC*LAAARL
Trigger: GAGCCTGGCAGCAGCCAGCCAGCAGCCTCTCCCAGG...ACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCCTGGGAGAGGCTGCTaGCTGGCTGCTGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLPGRGC*LAAARL
Trigger: GAGCCTGGCAGCAGCCAGCCAGCAGCCTCTCCCAGG...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCTCTGGGGACCACACTTaGGGCTGCCCACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGSGDHT*GCPHCS
Trigger: AGAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGA...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp AGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RADLGCGQQMTSRGLEGSGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...ACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGGGCGGGAGAATCGCTTaGACCCGGGAGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQGGRIA*TREAED
Trigger: ATCCTCCGCCTCCCGGGTTCAAGCGATTCTCCCGCC...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCTGGGGCTGCCCACACTaGTCTGTAGTTGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGWGCPH*SVVAKR
Trigger: CCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCA...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCCACCCTTTCCGCTTCTaGCTCATTTCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPHPFRF*LISAPP
Trigger: CGGCGGCGCAGAAATGAGGCAGAAGCGGAAAGGGTG...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCGGCGGATCTGGGGTGTaGTCAGCAGATGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFGGSGV*SADDQP
Trigger: CGGCTGGTCATCTGCTGACCACACCCCAGATCCGCC...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCTCAGCTCAGCAGGGCTaGGATCTCCTTTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGSAQQG*DLLSAS
Trigger: AGAAGCGGAAAGGAGATCTCAGCCCTGCTGAGCTGA...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTGCCCACACGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: DRQESQTLSGDHTWGCPHGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...GTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCACCCTTTCCGCTTCTaGCTCATTTCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPHPFRF*LISAPP
Trigger: CGGCGGCGCAGAAATGAGGCAGAAGCGGAAAGGGTG...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCCTCCCCTCTGCCTCTaGCCCAGGACATCCACCCCT +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQPPLCL*PRTSTP
Trigger: AGGGGTGGATGTCCTGGGGCAGAGGCAGAGGGGAGG...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523357.5
CDS-3UTR CCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGGGCGGATCTGGGGTGTaGTCAGCAGATGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLGGSGV*SADDQP
Trigger: CGGCTGGTCATCTGCTGACCACACCCCAGATCCGCC...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGGGCGGATCTGGGGTGTaGTCAGCAGATGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQGGSGV*SADDQP
Trigger: CGGCTGGTCATCTGCTGACCACACCCCAGATCCGCC...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp AGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTGACCACGGGGAAAGCTaGCAGCCACAAAACAATCCC +
Preference number: 4 (lower is better)
Translates to: RADLGCGQQMTSRGLEGSDHGES*QPQNNP
Trigger: GGGATTGTTTTGTGGCTGTCAGCTTTCCCCGTGGTC...ACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380353.8
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCTTCTGCCTCATTTCTaGGCCGCCGTAGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPLLPHF*AAVAEP
Trigger: TGGCTCTGCTACGGCGGCGCAGAAATGAGGCAGAAG...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCTTCTGCCTCATTTCTaGGCCGCCGTAGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEALLPHF*AAVAEP
Trigger: TGGCTCTGCTACGGCGGCGCAGAAATGAGGCAGAAG...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEAAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGAGGCTGCTGGCTGGCTaGTGCCAGGCTCACACCCCC +
Preference number: 4 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRRLLAG*CQAHTP
Trigger: GGGGGTGTGAGCCTGGCAGCAGCCAGCCAGCAGCCT...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGAGGCTGCTGGCTGGCTaGTGCCAGGCTCACACCCCC +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVRLLAG*CQAHTP
Trigger: GGGGGTGTGAGCCTGGCAGCAGCCAGCCAGCAGCCT...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCTGGGGCTGCCCACACTaGTCTGTAGTTGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEAWGCPH*SVVAKR
Trigger: CCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCA...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCTGGGGCTGCCCACACTaGTCTGTAGTTGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFWGCPH*SVVAKR
Trigger: CCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCA...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCTCCACCAGGCGGGGCTaGGCAGAAAGGCCATATTTG +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPSTRRG*AERPYL
Trigger: CAAATATGGCCTTTCTGCCCAGCCCCGCCTGGTGGA...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAATCTGGGGACCACACTTaGGGCTGCCCACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGESGDHT*GCPHCS
Trigger: AGAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGA...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGCCTGGGCTCCAGAGTTaGCCACTCCTCCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEPGLQS*PLLLAQ
Trigger: CTGTGCAAGGAGGAGTGGCCAACTCTGGAGCCCAGG...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521015.5
CDS-3UTR TCA 90 bp GACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTGCCCACACTCAGCTCAGCAGGGCTaGGATCTCCTTTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: DRQESQTLSGDHTWGCPHSAQQG*DLLSAS
Trigger: AGAAGCGGAAAGGAGATCTCAGCCCTGCTGAGCTGA...GTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256398.13
ENST00000380353.8
CDS-3UTR TCA 90 bp GACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTGCCCACACAAGACCTTGCGATACTaGGGAGGGACGGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: DRQESQTLSGDHTWGCPHKTLRY*GGTAAM
Trigger: CATTGCTGCCGTCCCTCCTCAGTATCGCAAGGTCTT...GTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256398.13
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGEDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp CACACTTGGGGCTGCCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGAAGTAGAGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: HTWGCPHCSVVAKRVGSRGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...TCTACTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TGTACTCGGTACACTCGAGTCCATGGAGGCACGAGGGCTAGGATCCGAGCCACCGACCACGGGGAAAGCTaGCAGCCACAAAACAATCCC +
Preference number: 4 (lower is better)
Translates to: CTRYTRVHGGTRARIRATDHGES*QPQNNP
Trigger: GGGATTGTTTTGTGGCTGTCAGCTTTCCCCGTGGTC...GGTGGCTCGGATCCTAGCCCTCGTGCCTCCATGGACTCGAGTGTACCGAGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523687.5
CDS-3UTR TCA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCGACCACGGGGAAAGCTaGCAGCCACAAAACAATCCC +
Preference number: 4 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFDHGES*QPQNNP
Trigger: GGGATTGTTTTGTGGCTGTCAGCTTTCCCCGTGGTC...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380353.8
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAACTTCTGCCTCATTTCTaGGCCGCCGTAGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGELLPHF*AAVAEP
Trigger: TGGCTCTGCTACGGCGGCGCAGAAATGAGGCAGAAG...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCTTCTGCCTCATTTCTaGGCCGCCGTAGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLLLPHF*AAVAEP
Trigger: TGGCTCTGCTACGGCGGCGCAGAAATGAGGCAGAAG...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGTCTCCTTTCCGCTTCTaGCTCATTTCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLSPFRF*LISAPP
Trigger: CGGCGGCGCAGAAATGAGGCAGAAGCGGAAAGGAGA...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000523687.5
CDS-3UTR GCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCTGGGCATCAAGACCTTaGGATACTGAGGAGGGACGG +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPWASRP*DTEEGR
Trigger: CCGTCCCTCCTCAGTATCGCAAGGTCTTGATGCCCA...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTTGGGCATCAAGACCTTaGGATACTGAGGAGGGACGG +
Preference number: 4 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGWASRP*DTEEGR
Trigger: CCGTCCCTCCTCAGTATCGCAAGGTCTTGATGCCCA...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCGACATCTGTGGGGTTTaGACATCACAGCCACGACAG +
Preference number: 4 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPDICGV*TSQPRQ
Trigger: CTGTCGTGGCTGTGATGTGCAAACCCCACAGATGTC...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAATGGGGCTGCCCACACTaGTCTGTAGTTGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGEWGCPH*SVVAKR
Trigger: CCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCA...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCACCCTTTCCGCTTCTaGCTCATTTCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQHPFRF*LISAPP
Trigger: CGGCGGCGCAGAAATGAGGCAGAAGCGGAAAGGGTG...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAAAGCCAAACGCTCTCTaGGGACCACACTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGEKPNAL*GPHLGL
Trigger: CAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTT...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGAAGCCAAACGCTCTCTaGGGACCACACTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLKPNAL*GPHLGL
Trigger: CAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTT...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp CACACTTGGGGCTGCCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGAAGTAGAGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: HTWGCPHCSVVAKRVGSRDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...TCTACTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGGGTGGGTTGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQGGLIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCAACCCACC...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CACACTTGGGGCTGCCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGAAGTAGATCTCCTTTCCGCTTCTaGCTCATTTCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: HTWGCPHCSVVAKRVGSRSPFRF*LISAPP
Trigger: CGGCGGCGCAGAAATGAGGCAGAAGCGGAAAGGAGA...TCTACTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256398.13
ENST00000380353.8
CDS-3UTR GCA 90 bp GACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTGCCCACACGACATCTGTGGGGTTTaGACATCACAGCCACGACAG +
Preference number: 4 (lower is better)
Translates to: DRQESQTLSGDHTWGCPHDICGV*TSQPRQ
Trigger: CTGTCGTGGCTGTGATGTGCAAACCCCACAGATGTC...GTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCGACATCTGTGGGGTTTaGACATCACAGCCACGACAG +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEADICGV*TSQPRQ
Trigger: CTGTCGTGGCTGTGATGTGCAAACCCCACAGATGTC...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCCCTCCATCAGCAGCATaGCAAATCCCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPPPSAA*QIPDAE
Trigger: TTCAGCATCAGGGATTTGGCATGCTGCTGATGGAGG...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGGACCACACTTGGGGCTaGCCACACTGCTCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLDHTWG*PHCSVV
Trigger: AACTACAGAGCAGTGTGGGCAGCCCCAAGTGTGGTC...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGGACCACACTTGGGGCTaGCCACACTGCTCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQDHTWG*PHCSVV
Trigger: AACTACAGAGCAGTGTGGGCAGCCCCAAGTGTGGTC...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGTCCACCAGGCGGGGCTaGGCAGAAAGGCCATATTTG +
Preference number: 4 (lower is better)
Translates to: AQDRQTGKPNALWGPHLGSTRRG*AERPYL
Trigger: CAAATATGGCCTTTCTGCCCAGCCCCGCCTGGTGGA...CCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256398.13
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGGTCAGGCATCATATaGGCCACCACTTTAAAACCG +
Preference number: 4 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGRSGII*ATTLKP
Trigger: CGGTTTTAAAGTGGTGGCCCATATGATGCCTGACCT...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGGGCGGATCTGGGGTGTaGTCAGCAGATGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVGGSGV*SADDQP
Trigger: CGGCTGGTCATCTGCTGACCACACCCCAGATCCGCC...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCGAATCTTTGGCCAGGTaGAATGACTCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFESLAR*NDSHTA
Trigger: GGCAGTGTGTGAGTCATTTCACCTGGCCAAAGATTC...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAATCTTTGGCCAGGTaGAATGACTCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGESLAR*NDSHTA
Trigger: GGCAGTGTGTGAGTCATTTCACCTGGCCAAAGATTC...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCGAATCTTTGGCCAGGTaGAATGACTCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEAESLAR*NDSHTA
Trigger: GGCAGTGTGTGAGTCATTTCACCTGGCCAAAGATTC...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp AGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTATCTGGGTCTTCGTATaGCAAGAATGTTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RADLGCGQQMTSRGLEGSIWVFV*QECFPA
Trigger: GGCTGGGAAACATTCTTGTCATACGAAGACCCAGAT...ACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGCGGGAGAATCGCTTaGACCCGGGAGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTGGRIA*TREAED
Trigger: ATCCTCCGCCTCCCGGGTTCAAGCGATTCTCCCGCC...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCTCGATGTCTTTCCCCTaGTCGTGGGCTTCAATCAGT +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEASMSFP*SWASIS
Trigger: ACTGATTGAAGCCCACGAGCAGGGGAAAGACATCGA...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000523687.5
CDS-3UTR GCA 90 bp GCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGTGGGCATCAAGACCTTaGGATACTGAGGAGGGACGG +
Preference number: 4 (lower is better)
Translates to: AQDRQTGKPNALWGPHLGWASRP*DTEEGR
Trigger: CCGTCCCTCCTCAGTATCGCAAGGTCTTGATGCCCA...CCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256398.13
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGACATCTGTGGGGTTTaGACATCACAGCCACGACAG +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEDICGV*TSQPRQ
Trigger: CTGTCGTGGCTGTGATGTGCAAACCCCACAGATGTC...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGGACATCTGTGGGGTTTaGACATCACAGCCACGACAG +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLDICGV*TSQPRQ
Trigger: CTGTCGTGGCTGTGATGTGCAAACCCCACAGATGTC...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCACACTCCCATACACATaGAGCTCTCGTACTATGGAG +
Preference number: 4 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPTLPYT*SSRTME
Trigger: CTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGT...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTGCCCACACCCTCCATCAGCAGCATaGCAAATCCCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: DRQESQTLSGDHTWGCPHPPSAA*QIPDAE
Trigger: TTCAGCATCAGGGATTTGGCATGCTGCTGATGGAGG...GTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCTCACACCCCCACAACTaGAATTCCTCTTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPSHPHN*NSSFPV
Trigger: GACTGGGAAAGAGGAATTGCAGTTGTGGGGGTGTGA...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGGACCACACTTGGGGCTaGCCACACTGCTCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: AQDRQTGKPNALWGPHLGDHTWG*PHCSVV
Trigger: AACTACAGAGCAGTGTGGGCAGCCCCAAGTGTGGTC...CCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTATGTGTGGACATCTGTaGGGTTTGCACATCACAGCC +
Preference number: 4 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGMCGHL*GLHITA
Trigger: GGCTGTGATGTGCAAACCCCACAGATGTCCACACAT...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGACTGCCTTCACAGTGTaGCCCCTGTTGGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQTAFTV*PLLVSL
Trigger: TAGAGACACCAACAGGGGCCACACTGTGAAGGCAGT...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTGCAGAAGAGTGGACTaGTGTGGCCATTATTTCAGC +
Preference number: 4 (lower is better)
Translates to: RADLGCGQQMTSRGLEGSCRRVD*CGHYFS
Trigger: GCTGAAATAATGGCCACACCAGTCCACTCTTCTGCA...ACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGCCTGGGAGAGGCTGCTaGCTGGCTGCTGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LRNPDSPCSAREDTAEEWPGRGC*LAAARL
Trigger: GAGCCTGGCAGCAGCCAGCCAGCAGCCTCTCCCAGG...CCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp ACTCGGTACACTCGAGTCCATGGAGGCACGAGGGCTAGGATCCGAGCCACCAATTTTGGCCAGGTGAAATaGCTCACACACTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: TRYTRVHGGTRARIRATNFGQVK*LTHCLH
Trigger: GTGAAGGCAGTGTGTGAGTCATTTCACCTGGCCAAA...ATTGGTGGCTCGGATCCTAGCCCTCGTGCCTCCATGGACTCGAGTGTACCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCATCTGGGTCTTCGTATaGCAAGAATGTTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFIWVFV*QECFPA
Trigger: GGCTGGGAAACATTCTTGTCATACGAAGACCCAGAT...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TCAATGTCTCTTTCTAGTCCCACGTTTGGCAGGTCAGGCATCATATGGGCCACCGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: SMSLSSPTFGRSGIIWATGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...GGTGGCCCATATGATGCCTGACCTGCCAAACGTGGGACTAGAAAGAGACATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCTGTGGAAGCAAATCTTaGTTTAGGGGCACACAACCT +
Preference number: 4 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPCGSKS*FRGTQP
Trigger: AGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACA...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp CACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACTGGCGGGAGAATCGCTTaGACCCGGGAGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: HRLSQNRPPAGLMQNVETGGRIA*TREAED
Trigger: ATCCTCCGCCTCCCGGGTTCAAGCGATTCTCCCGCC...AGTTTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGGGTGGGTTGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRGGLIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCAACCCACC...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGTCGATGTCTTTCCCCTaGTCGTGGGCTTCAATCAGT +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLSMSFP*SWASIS
Trigger: ACTGATTGAAGCCCACGAGCAGGGGAAAGACATCGA...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000523687.5
CDS-3UTR GCA 90 bp CAACCTGAGACTCCACCCGCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGCATCAAGACCTTaGGATACTGAGGAGGGACGG +
Preference number: 4 (lower is better)
Translates to: QPETPPAQDRQTGKPNALWASRP*DTEEGR
Trigger: CCGTCCCTCCTCAGTATCGCAAGGTCTTGATGCCCA...GAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGCGGGTGGAGTCTCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256398.13
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCAATCTCCAGCCTTGTaGAGCCATAGGTCAACATGT +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEAQSPAL*SHRSTC
Trigger: ACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCTTCCCAGCCACCATTTaGAACATAATCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGFPATI*NIISPY
Trigger: GTAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAA...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCACACTCCCATACACATaGAGCTCTCGTACTATGGAG +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEATLPYT*SSRTME
Trigger: CTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGT...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCCTCCATCAGCAGCATaGCAAATCCCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLPPSAA*QIPDAE
Trigger: TTCAGCATCAGGGATTTGGCATGCTGCTGATGGAGG...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCTATAATAATTCCTGGTaGCGACCCCTGATATCACAG +
Preference number: 4 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGYNNSW*RPLISQ
Trigger: CTGTGATATCAGGGGTCGGCACCAGGAATTATTATA...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGATGTGTGGACATCTGTaGGGTTTGCACATCACAGCC +
Preference number: 4 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQMCGHL*GLHITA
Trigger: GGCTGTGATGTGCAAACCCCACAGATGTCCACACAT...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGATGTGTGGACATCTGTaGGGTTTGCACATCACAGCC +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEMCGHL*GLHITA
Trigger: GGCTGTGATGTGCAAACCCCACAGATGTCCACACAT...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCTGTAAAACTGATGTGTaGACATCTGTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGCKTDV*TSVGFA
Trigger: TGCAAACCCCACAGATGTCCACACATCAGTTTTACA...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTAGGTCAGGCATCATATaGGCCACCACTTTAAAACCG +
Preference number: 4 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGRSGII*ATTLKP
Trigger: CGGTTTTAAAGTGGTGGCCCATATGATGCCTGACCT...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCAGGTCAGGCATCATATaGGCCACCACTTTAAAACCG +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEARSGII*ATTLKP
Trigger: CGGTTTTAAAGTGGTGGCCCATATGATGCCTGACCT...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGGCAGCTCTCGTACTATaGAGACACCTCCACCCAATT +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLAALVL*RHLHPI
Trigger: AATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGC...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAAGAGTGGACTGGTGTaGCCATTATTTCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGKSGLV*PLFQHL
Trigger: AAGATGCTGAAATAATGGCCACACCAGTCCACTCTT...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCTGCAGAAGAGTGGACTaGTGTGGCCATTATTTCAGC +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPCRRVD*CGHYFS
Trigger: GCTGAAATAATGGCCACACCAGTCCACTCTTCTGCA...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGAAGACCTTGCGATACTaGGGAGGGACGGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVKTLRY*GGTAAM
Trigger: CATTGCTGCCGTCCCTCCTCAGTATCGCAAGGTCTT...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGATCTGGGTCTTCGTATaGCAAGAATGTTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEIWVFV*QECFPA
Trigger: GGCTGGGAAACATTCTTGTCATACGAAGACCCAGAT...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGATCTGGGTCTTCGTATaGCAAGAATGTTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLIWVFV*QECFPA
Trigger: GGCTGGGAAACATTCTTGTCATACGAAGACCCAGAT...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCCCAATCAAAATGTCTTaGTCTGGGTCTTCGTATGAC +
Preference number: 4 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPPIKMS*SGSSYD
Trigger: GTCATACGAAGACCCAGATCAAGACATTTTGATTGG...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTTTCCTGTTTCAACCTaGCTTTCTGTCCCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQFPVST*LSVPRV
Trigger: TACCCTGGGGACAGAAAGTCAGGTTGAAACAGGAAA...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCACAAAGAATGTGGAATaGAGCTCTTTGTCATCGCCG +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEATKNVE*SSLSSP
Trigger: CGGCGATGACAAAGAGCTTCATTCCACATTCTTTGT...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCTGTGGAAGCAAATCTTaGTTTAGGGGCACACAACCT +
Preference number: 4 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFCGSKS*FRGTQP
Trigger: AGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACA...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTCAGCTCAGCAGGGCTaGGATCTCCAGACTATGGAG +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVSAQQG*DLQTME
Trigger: CTCCATAGTCTGGAGATCTCAGCCCTGCTGAGCTGA...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521015.5
CDS-3UTR GCA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAACAATCTCCAGCCTTGTaGAGCCATAGGTCAACATGT +
Preference number: 4 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGEQSPAL*SHRSTC
Trigger: ACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCAATCTCCAGCCTTGTaGAGCCATAGGTCAACATGT +
Preference number: 4 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLQSPAL*SHRSTC
Trigger: ACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAATCTCCAGCCTTGTaGAGCCATAGGTCAACATGT +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLQSPAL*SHRSTC
Trigger: ACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCTCTCTCAGGTTACCATaGTCTACTCCTGAGCTAACT +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEASLRLP*STPELT
Trigger: AGTTAGCTCAGGAGTAGAGCATGGTAACCTGAGAGA...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp AGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCCAGCCACCATTTaGAACATAATCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: RADLGCGQQMTSRGLEGSFPATI*NIISPY
Trigger: GTAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAA...ACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCTTTCTTCTGAACACTTaGGTAATCGTAGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPFLLNT*VIVGGQ
Trigger: TTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAA...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TTCCTGGTGCCGACCCCTGATATCACAGCGATTTTCCCAGACCCATGTTCTTCTGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: FLVPTPDITAIFPDPCSSAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...AGAAGAACATGGGTCTGGGAAAATCGCTGTGATATCAGGGGTCGGCACCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAAGGCTGCTGGCTGGCTaGTGCCAGGCTCACACCCCC +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAERLLAG*CQAHTP
Trigger: GGGGGTGTGAGCCTGGCAGCAGCCAGCCAGCAGCCT...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCTGTAAAACTGATGTGTaGACATCTGTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPCKTDV*TSVGFA
Trigger: TGCAAACCCCACAGATGTCCACACATCAGTTTTACA...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTATCTCTGTATTCTTCTaGAAGGGCCATAAACGTTCC +
Preference number: 4 (lower is better)
Translates to: RADLGCGQQMTSRGLEGSISVFF*KGHKRS
Trigger: GGAACGTTTATGGCCCTTCCAGAAGAATACAGAGAT...ACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGGCAGCTCTCGTACTATaGAGACACCTCCACCCAATT +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQAALVL*RHLHPI
Trigger: AATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGC...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp CACACTTGGGGCTGCCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGAAGTAGAGCAGCTCTCGTACTATaGAGACACCTCCACCCAATT +
Preference number: 4 (lower is better)
Translates to: HTWGCPHCSVVAKRVGSRAALVL*RHLHPI
Trigger: AATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGC...TCTACTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGTGCAGAAGAGTGGACTaGTGTGGCCATTATTTCAGC +
Preference number: 4 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLCRRVD*CGHYFS
Trigger: GCTGAAATAATGGCCACACCAGTCCACTCTTCTGCA...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GAGTCCATGGAGGCACGAGGGCTAGGATCCGAGCCACCAATTCAACCAGGTCACTGCAGAAGAGTGGACTaGTGTGGCCATTATTTCAGC +
Preference number: 4 (lower is better)
Translates to: ESMEARGLGSEPPIQPGHCRRVD*CGHYFS
Trigger: GCTGAAATAATGGCCACACCAGTCCACTCTTCTGCA...GTGACCTGGTTGAATTGGTGGCTCGGATCCTAGCCCTCGTGCCTCCATGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAACCTGGGAGAGGCTGCTaGCTGGCTGCTGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEPGRGC*LAAARL
Trigger: GAGCCTGGCAGCAGCCAGCCAGCAGCCTCTCCCAGG...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTTCTGGGGACCACACTTaGGGCTGCCCACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTSGDHT*GCPHCS
Trigger: AGAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGA...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCATTTGGCAGCTGTCTTaGTTTTCACCCTTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPIWQLS*FSPFPL
Trigger: AAGCGGAAAGGGTGAAAACCAAGACAGCTGCCAAAT...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCTTCTCTCAGAATACTTaGCTGCCTCGTAAATATTGT +
Preference number: 4 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGFSQNT*LPRKYC
Trigger: ACAATATTTACGAGGCAGTCAAGTATTCTGAGAGAA...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGATCTGGGTCTTCGTATaGCAAGAATGTTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQIWVFV*QECFPA
Trigger: GGCTGGGAAACATTCTTGTCATACGAAGACCCAGAT...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCAATCAAAATGTCTTaGTCTGGGTCTTCGTATGAC +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPPIKMS*SGSSYD
Trigger: GTCATACGAAGACCCAGATCAAGACATTTTGATTGG...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTGCCCACACGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: DRQESQTLSGDHTWGCPHVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...GTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp AGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RRVDWCGHYFSIFTMYGPDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...AGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR TCA 90 bp CACACTTGGGGCTGCCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGAAGTAGATTTCCTGTTTCAACCTaGCTTTCTGTCCCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: HTWGCPHCSVVAKRVGSRFPVST*LSVPRV
Trigger: TACCCTGGGGACAGAAAGTCAGGTTGAAACAGGAAA...TCTACTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGAGGCGGGAGAATCGCTTaGACCCGGGAGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: QVMASVEANLDLGAHNLRGGRIA*TREAED
Trigger: ATCCTCCGCCTCCCGGGTTCAAGCGATTCTCCCGCC...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp AGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTCTCCTTTCCGCTTCTaGCTCATTTCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RRVDWCGHYFSIFTMYGPSPFRF*LISAPP
Trigger: CGGCGGCGCAGAAATGAGGCAGAAGCGGAAAGGAGA...AGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518112.5
ENST00000523687.5
CDS-3UTR GCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTTTTCTTCTGAACACTTaGGTAATCGTAGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGFLLNT*VIVGGQ
Trigger: TTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAA...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTTATAATAATTCCTGGTaGCGACCCCTGATATCACAG +
Preference number: 4 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGYNNSW*RPLISQ
Trigger: CTGTGATATCAGGGGTCGGCACCAGGAATTATTATA...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp AAAATACAAAAATTAGCAGCGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KIQKLAAAGACNPSYSGGAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...GCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCGCTGCTAATTTTTGTATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GGGAGGATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACTCCACCAGGCGGGGCTaGGCAGAAAGGCCATATTTG +
Preference number: 4 (lower is better)
Translates to: GRILQKSGLVWPLFQHLHSTRRG*AERPYL
Trigger: CAAATATGGCCTTTCTGCCCAGCCCCGCCTGGTGGA...GTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519261.5
CDS-3UTR CCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGACTGCCTTCACAGTGTaGCCCCTGTTGGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVTAFTV*PLLVSL
Trigger: TAGAGACACCAACAGGGGCCACACTGTGAAGGCAGT...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTCAATTCAACCTGGTATaGCCGTACTTTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: RADLGCGQQMTSRGLEGSQFNLV*PYFVMN
Trigger: ATTCATCACAAAGTACGGCCATACCAGGTTGAATTG...ACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCTTCTATAATAATTCCTaGTGCCGACCCCTGATATCA +
Preference number: 4 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPFYNNS*CRPLIS
Trigger: TGATATCAGGGGTCGGCACCAGGAATTATTATAGAA...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCAAGAGTGGACTGGTGTaGCCATTATTTCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFKSGLV*PLFQHL
Trigger: AAGATGCTGAAATAATGGCCACACCAGTCCACTCTT...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTAAGAGTGGACTGGTGTaGCCATTATTTCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGKSGLV*PLFQHL
Trigger: AAGATGCTGAAATAATGGCCACACCAGTCCACTCTT...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTAAGCCAAACGCTCTCTaGGGACCACACTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTKPNAL*GPHLGL
Trigger: CAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTT...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGATTTGGCAGCTGTCTTaGTTTTCACCCTTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEIWQLS*FSPFPL
Trigger: AAGCGGAAAGGGTGAAAACCAAGACAGCTGCCAAAT...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGGAGGGACGGCAGCAATaGTATCCACCAGGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEEGRQQ*YPPGGA
Trigger: AGCCCCGCCTGGTGGATATCATTGCTGCCGTCCCTC...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTAAGACCTTGCGATACTaGGGAGGGACGGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTKTLRY*GGTAAM
Trigger: CATTGCTGCCGTCCCTCCTCAGTATCGCAAGGTCTT...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCTTCCAATACACTTTGTaGGGCTTCTCTCAGAATACT +
Preference number: 4 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFFQYTL*GFSQNT
Trigger: AGTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAA...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCTTCCAATACACTTTGTaGGGCTTCTCTCAGAATACT +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPFQYTL*GFSQNT
Trigger: AGTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAA...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTTTGGCCAGGTGAAATaGCTCACACACTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVFGQVK*LTHCLH
Trigger: GTGAAGGCAGTGTGTGAGTCATTTCACCTGGCCAAA...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp CAACCTGAGACTCCACCCGCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCATCTGGGTCTTCGTATaGCAAGAATGTTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QPETPPAQDRQTGKPNALIWVFV*QECFPA
Trigger: GGCTGGGAAACATTCTTGTCATACGAAGACCCAGAT...GAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGCGGGTGGAGTCTCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGCCAATCAAAATGTCTTaGTCTGGGTCTTCGTATGAC +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEPIKMS*SGSSYD
Trigger: GTCATACGAAGACCCAGATCAAGACATTTTGATTGG...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCCAATCAAAATGTCTTaGTCTGGGTCTTCGTATGAC +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLPIKMS*SGSSYD
Trigger: GTCATACGAAGACCCAGATCAAGACATTTTGATTGG...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGACAAAGAATGTGGAATaGAGCTCTTTGTCATCGCCG +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQTKNVE*SSLSSP
Trigger: CGGCGATGACAAAGAGCTTCATTCCACATTCTTTGT...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp AGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTAAATGTCGCTTCATaGAGTAATCTGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RADLGCGQQMTSRGLEGSLNVAS*SNLVWF
Trigger: AAACCAGACCAGATTACTGCATGAAGCGACATTTAA...ACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CAACCTGAGACTCCACCCGCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCCAATCTCCAGCCTTGTaGAGCCATAGGTCAACATGT +
Preference number: 4 (lower is better)
Translates to: QPETPPAQDRQTGKPNALQSPAL*SHRSTC
Trigger: ACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG...GAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGCGGGTGGAGTCTCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGTCTCTCAGGTTACCATaGTCTACTCCTGAGCTAACT +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQSLRLP*STPELT
Trigger: AGTTAGCTCAGGAGTAGAGCATGGTAACCTGAGAGA...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGTTCCCAGCCACCATTTaGAACATAATCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLFPATI*NIISPY
Trigger: GTAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAA...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTTTCTTCTGAACACTTaGGTAATCGTAGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQFLLNT*VIVGGQ
Trigger: TTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAA...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGTATAATAATTCCTGGTaGCGACCCCTGATATCACAG +
Preference number: 4 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLYNNSW*RPLISQ
Trigger: CTGTGATATCAGGGGTCGGCACCAGGAATTATTATA...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTAATGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VDWCGHYFSIFTMYGPCNAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...ATTACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR CCA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGATGTGTGGACATCTGTaGGGTTTGCACATCACAGCC +
Preference number: 4 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRMCGHL*GLHITA
Trigger: GGCTGTGATGTGCAAACCCCACAGATGTCCACACAT...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ACTCGGTACACTCGAGTCCATGGAGGCACGAGGGCTAGGATCCGAGCCACCAATTGTAAAACTGATGTGTaGACATCTGTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: TRYTRVHGGTRARIRATNCKTDV*TSVGFA
Trigger: TGCAAACCCCACAGATGTCCACACATCAGTTTTACA...ATTGGTGGCTCGGATCCTAGCCCTCGTGCCTCCATGGACTCGAGTGTACCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGTGTAAAACTGATGTGTaGACATCTGTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLCKTDV*TSVGFA
Trigger: TGCAAACCCCACAGATGTCCACACATCAGTTTTACA...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTCAGTGTAAGACTGGGTaGAATACTCAAAATCAGAAT +
Preference number: 4 (lower is better)
Translates to: RADLGCGQQMTSRGLEGSQCKTG*NTQNQN
Trigger: ATTCTGATTTTGAGTATTCCACCCAGTCTTACACTG...ACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000524103.5
CDS-3UTR CCA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAATCTCTGTATTCTTCTaGAAGGGCCATAAACGTTCC +
Preference number: 4 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGEISVFF*KGHKRS
Trigger: GGAACGTTTATGGCCCTTCCAGAAGAATACAGAGAT...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGATCTCTGTATTCTTCTaGAAGGGCCATAAACGTTCC +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEISVFF*KGHKRS
Trigger: GGAACGTTTATGGCCCTTCCAGAAGAATACAGAGAT...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCACTGCCTTCACAGTGTaGCCCCTGTTGGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: CQGGYCRRVDWCGHYFSITAFTV*PLLVSL
Trigger: TAGAGACACCAACAGGGGCCACACTGTGAAGGCAGT...GATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCAATTCAACCTGGTATaGCCGTACTTTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPQFNLV*PYFVMN
Trigger: ATTCATCACAAAGTACGGCCATACCAGGTTGAATTG...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTGCCCACACCAATTCAACCTGGTATaGCCGTACTTTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: DRQESQTLSGDHTWGCPHQFNLV*PYFVMN
Trigger: ATTCATCACAAAGTACGGCCATACCAGGTTGAATTG...GTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGGCAGCTCTCGTACTATaGAGACACCTCCACCCAATT +
Preference number: 4 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRAALVL*RHLHPI
Trigger: AATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGC...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTGCCCACACTTCTATAATAATTCCTaGTGCCGACCCCTGATATCA +
Preference number: 4 (lower is better)
Translates to: DRQESQTLSGDHTWGCPHFYNNS*CRPLIS
Trigger: TGATATCAGGGGTCGGCACCAGGAATTATTATAGAA...GTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp CAACCTGAGACTCCACCCGCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGCAGAAGAGTGGACTaGTGTGGCCATTATTTCAGC +
Preference number: 4 (lower is better)
Translates to: QPETPPAQDRQTGKPNALCRRVD*CGHYFS
Trigger: GCTGAAATAATGGCCACACCAGTCCACTCTTCTGCA...GAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGCGGGTGGAGTCTCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGGCGGATCTGGGGTGTaGTCAGCAGATGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEGGSGV*SADDQP
Trigger: CGGCTGGTCATCTGCTGACCACACCCCAGATCCGCC...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGGGCGGATCTGGGGTGTaGTCAGCAGATGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEGGSGV*SADDQP
Trigger: CGGCTGGTCATCTGCTGACCACACCCCAGATCCGCC...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCAGCTCTCATGGAGGTTaGACACATATATTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPSSHGG*THIFPV
Trigger: TACAGGAAATATATGTGTCCAACCTCCATGAGAGCT...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTAATAGTGAACAGCTTCTGTaGTGGCCTCCCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VDWCGHYFSIFTMYGPCNSEQLL*WPPLCL
Trigger: GAGGCAGAGGGGAGGCCACCACAGAAGCTGTTCACT...ATTACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523357.5
CDS-3UTR TCA 90 bp TTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGAAGACCTTGCGATACTaGGGAGGGACGGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: LRNPDSPCSAREDTAEEWKTLRY*GGTAAM
Trigger: CATTGCTGCCGTCCCTCCTCAGTATCGCAAGGTCTT...CCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCTTCTCTCAGAATACTTaGCTGCCTCGTAAATATTGT +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPFSQNT*LPRKYC
Trigger: ACAATATTTACGAGGCAGTCAAGTATTCTGAGAGAA...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAATTCCAATACACTTTGTaGGGCTTCTCTCAGAATACT +
Preference number: 4 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGEFQYTL*GFSQNT
Trigger: AGTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAA...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGTTCCAATACACTTTGTaGGGCTTCTCTCAGAATACT +
Preference number: 4 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLFQYTL*GFSQNT
Trigger: AGTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAA...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TTCCTGGTGCCGACCCCTGATATCACAGCGATTTTCCCAGACCCATGTTCTTCTGAATCTTTGGCCAGGTaGAATGACTCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: FLVPTPDITAIFPDPCSSESLAR*NDSHTA
Trigger: GGCAGTGTGTGAGTCATTTCACCTGGCCAAAGATTC...AGAAGAACATGGGTCTGGGAAAATCGCTGTGATATCAGGGGTCGGCACCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCCAATCAAAATGTCTTaGTCTGGGTCTTCGTATGAC +
Preference number: 4 (lower is better)
Translates to: AQDRQTGKPNALWGPHLGPIKMS*SGSSYD
Trigger: GTCATACGAAGACCCAGATCAAGACATTTTGATTGG...CCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp ACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTAATCTGTCTTCTGCCTCATTTCTaGGCCGCCGTAGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: TGVAIISASSPCTGLVICLLPHF*AAVAEP
Trigger: TGGCTCTGCTACGGCGGCGCAGAAATGAGGCAGAAG...ACAGATTACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCTTAAATGTCGCTTCATaGAGTAATCTGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEALNVAS*SNLVWF
Trigger: AAACCAGACCAGATTACTGCATGAAGCGACATTTAA...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGTTTCTTCTGAACACTTaGGTAATCGTAGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQFLLNT*VIVGGQ
Trigger: TTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAA...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGACACTCCCATACACATaGAGCTCTCGTACTATGGAG +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVTLPYT*SSRTME
Trigger: CTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGT...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCCCTCCATCAGCAGCATaGCAAATCCCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: QKSGLVWPLFQHLHHVRAPPSAA*QIPDAE
Trigger: TTCAGCATCAGGGATTTGGCATGCTGCTGATGGAGG...GGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR GCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGTATAATAATTCCTGGTaGCGACCCCTGATATCACAG +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQYNNSW*RPLISQ
Trigger: CTGTGATATCAGGGGTCGGCACCAGGAATTATTATA...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TGGAGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTCTGAACACTTGCGTAGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: WRHLHPIRNGKFLLNTCVAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...TACGCAAGTGTTCAGAAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVEAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCTGTTTTCCATTGTTTTaGTTTCACACACGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFCFPLF*FHTRVE
Trigger: TTCAACCCGTGTGTGAAAGCAAAACAATGGAAAACA...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACTCTGGTGCCGACCCCTTaGAAAGTGCCTAGAGTGAAC +
Preference number: 4 (lower is better)
Translates to: HRLSQNRPPAGLMQNVETLVPTP*KVPRVN
Trigger: GTTCACTCTAGGCACTTTGCAAGGGGTCGGCACCAG...AGTTTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523357.5
CDS-3UTR CCA 90 bp TGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCATGTGTGGACATCTGTaGGGTTTGCACATCACAGCC +
Preference number: 4 (lower is better)
Translates to: CQGGYCRRVDWCGHYFSIMCGHL*GLHITA
Trigger: GGCTGTGATGTGCAAACCCCACAGATGTCCACACAT...GATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGATCTCTGTATTCTTCTaGAAGGGCCATAAACGTTCC +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQISVFF*KGHKRS
Trigger: GGAACGTTTATGGCCCTTCCAGAAGAATACAGAGAT...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCCTTCATGCAGTAATCTaGTCTGGTTTCAATAGTAAT +
Preference number: 4 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPLHAVI*SGFNSN
Trigger: ATTACTATTGAAACCAGACCAGATTACTGCATGAAG...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp CCTGTTGGTGTCTCTAGCCACATCTTCATAAACACTCTGCACCCCAATCTCCAGACTGCCTTCACAGTGTaGCCCCTGTTGGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: PVGVSSHIFINTLHPNLQTAFTV*PLLVSL
Trigger: TAGAGACACCAACAGGGGCCACACTGTGAAGGCAGT...CTGGAGATTGGGGTGCAGAGTGTTTATGAAGATGTGGCTAGAGACACCAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGAGGTCAGGCATCATATaGGCCACCACTTTAAAACCG +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVRSGII*ATTLKP
Trigger: CGGTTTTAAAGTGGTGGCCCATATGATGCCTGACCT...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAAAGCCAAACGCTCTCTaGGGACCACACTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVEKPNAL*GPHLGL
Trigger: CAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTT...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAAGCTCTCATGGAGGTTaGACACATATATTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGESSHGG*THIFPV
Trigger: TACAGGAAATATATGTGTCCAACCTCCATGAGAGCT...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR TCA 90 bp CAATCTCCAGCCTTGTGCAGCCATAGGTCAACATGTCACTTAAATGTCGCTTCATCAGCTCAGCAGGGCTaGGATCTCCTTTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QSPALCSHRSTCHLNVASSAQQG*DLLSAS
Trigger: AGAAGCGGAAAGGAGATCTCAGCCCTGCTGAGCTGA...TGAAGCGACATTTAAGTGACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518112.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTTCTCTCAGAATACTTaGCTGCCTCGTAAATATTGT +
Preference number: 4 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQFSQNT*LPRKYC
Trigger: ACAATATTTACGAGGCAGTCAAGTATTCTGAGAGAA...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGTTCCAATACACTTTGTaGGGCTTCTCTCAGAATACT +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQFQYTL*GFSQNT
Trigger: AGTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAA...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp CGGCTGCTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATGGAGTTCCAATACACTTTGTaGGGCTTCTCTCAGAATACT +
Preference number: 4 (lower is better)
Translates to: RLLTGTTLPYTCSSRTMEFQYTL*GFSQNT
Trigger: AGTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAA...CTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAGCAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GGGAGGATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACTTTGGCCAGGTGAAATaGCTCACACACTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GRILQKSGLVWPLFQHLHFGQVK*LTHCLH
Trigger: GTGAAGGCAGTGTGTGAGTCATTTCACCTGGCCAAA...GTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTTTTGGCCAGGTGAAATaGCTCACACACTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTFGQVK*LTHCLH
Trigger: GTGAAGGCAGTGTGTGAGTCATTTCACCTGGCCAAA...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TCACCATGTACGGGCCTTGTAATCTGTAGCCGATCTTTCTATAATAATTCCTGGGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: SPCTGLVICSRSFYNNSWGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...CCAGGAATTATTATAGAAAGATCGGCTACAGATTACAAGGCCCGTACATGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGAGTTTGCTCCTCGAATaGCAATCAGTTTTATTGCAT +
Preference number: 4 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLSLLLE*QSVLLH
Trigger: ATGCAATAAAACTGATTGTCATTCGAGGAGCAAACT...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTTCCTGTTTCAACCTaGCTTTCTGTCCCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: CQGGYCRRVDWCGHYFSIFPVST*LSVPRV
Trigger: TACCCTGGGGACAGAAAGTCAGGTTGAAACAGGAAA...GATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518112.5
CDS-3UTR TCA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGAGGTGGGTTGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: QVMASVEANLDLGAHNLRGGLIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCAACCCACC...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGGTGGGTTGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEGGLIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCAACCCACC...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp AAAATACAAAAATTAGCAGCGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCTCGATGTCTTTCCCCTaGTCGTGGGCTTCAATCAGT +
Preference number: 4 (lower is better)
Translates to: KIQKLAAAGACNPSYSGGSMSFP*SWASIS
Trigger: ACTGATTGAAGCCCACGAGCAGGGGAAAGACATCGA...GCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCGCTGCTAATTTTTGTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
CDS-3UTR GCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTTCGATGTCTTTCCCCTaGTCGTGGGCTTCAATCAGT +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTSMSFP*SWASIS
Trigger: ACTGATTGAAGCCCACGAGCAGGGGAAAGACATCGA...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000523687.5
CDS-3UTR GCA 90 bp GTGAACTGTTCAATGTCTCTTTCTAGTCCCACGTTTGGCAGGTCAGGCATCATATGGGCATCAAGACCTTaGGATACTGAGGAGGGACGG +
Preference number: 4 (lower is better)
Translates to: VNCSMSLSSPTFGRSGIIWASRP*DTEEGR
Trigger: CCGTCCCTCCTCAGTATCGCAAGGTCTTGATGCCCA...TATGATGCCTGACCTGCCAAACGTGGGACTAGAAAGAGACATTGAACAGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519261.5
CDS-3UTR GCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGTTAAATGTCGCTTCATaGAGTAATCTGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDELNVAS*SNLVWF
Trigger: AAACCAGACCAGATTACTGCATGAAGCGACATTTAA...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTCTCTCAGGTTACCATaGTCTACTCCTGAGCTAACT +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVSLRLP*STPELT
Trigger: AGTTAGCTCAGGAGTAGAGCATGGTAACCTGAGAGA...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CAACCTGAGACTCCACCCGCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTTCCCAGCCACCATTTaGAACATAATCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: QPETPPAQDRQTGKPNALFPATI*NIISPY
Trigger: GTAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAA...GAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGCGGGTGGAGTCTCAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTCCATCAGCAGCATaGCAAATCCCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: CRRVDWCGHYFSIFTMYGPPSAA*QIPDAE
Trigger: TTCAGCATCAGGGATTTGGCATGCTGCTGATGGAGG...CCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR GCA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGACAATCAGTTTTATTaGATGAGTTATGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGDNQFY*MSYGVQ
Trigger: TTGGACACCATAACTCATGCAATAAAACTGATTGTC...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCGACAATCAGTTTTATTaGATGAGTTATGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPDNQFY*MSYGVQ
Trigger: TTGGACACCATAACTCATGCAATAAAACTGATTGTC...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR GCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTTCACACCCCCACAACTaGAATTCCTCTTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTSHPHN*NSSFPV
Trigger: GACTGGGAAAGAGGAATTGCAGTTGTGGGGGTGTGA...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAGACCACACTTGGGGCTaGCCACACTGCTCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVEDHTWG*PHCSVV
Trigger: AACTACAGAGCAGTGTGGGCAGCCCCAAGTGTGGTC...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGGTTTCGCCTTTAACTTaGGCATCAAGACCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVVSPLT*ASRPCD
Trigger: ATCGCAAGGTCTTGATGCCCAAGTTAAAGGCGAAAC...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp CATACACATGCAGCTCTCGTACTATGGAGACACCTCCACCCAATTCGAAACGGAATGTGTGGACATCTGTaGGGTTTGCACATCACAGCC +
Preference number: 4 (lower is better)
Translates to: HTHAALVLWRHLHPIRNGMCGHL*GLHITA
Trigger: GGCTGTGATGTGCAAACCCCACAGATGTCCACACAT...TCCGTTTCGAATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGCATGTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp AAAATACAAAAATTAGCAGCGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCATGTGTGGACATCTGTaGGGTTTGCACATCACAGCC +
Preference number: 4 (lower is better)
Translates to: KIQKLAAAGACNPSYSGGMCGHL*GLHITA
Trigger: GGCTGTGATGTGCAAACCCCACAGATGTCCACACAT...GCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCGCTGCTAATTTTTGTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGCAGTGTAAGACTGGGTaGAATACTCAAAATCAGAAT +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEQCKTG*NTQNQN
Trigger: ATTCTGATTTTGAGTATTCCACCCAGTCTTACACTG...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000524103.5
CDS-3UTR CCA 90 bp GAGTCCATGGAGGCACGAGGGCTAGGATCCGAGCCACCAATTCAACCAGGTCACCAGTGTAAGACTGGGTaGAATACTCAAAATCAGAAT +
Preference number: 4 (lower is better)
Translates to: ESMEARGLGSEPPIQPGHQCKTG*NTQNQN
Trigger: ATTCTGATTTTGAGTATTCCACCCAGTCTTACACTG...GTGACCTGGTTGAATTGGTGGCTCGGATCCTAGCCCTCGTGCCTCCATGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518112.5
CDS-3UTR CCA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCTTCATGCAGTAATCTaGTCTGGTTTCAATAGTAAT +
Preference number: 4 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEALHAVI*SGFNSN
Trigger: ATTACTATTGAAACCAGACCAGATTACTGCATGAAG...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AAATTTAGTAGGATCCCGGCTGCTCACAGGGACCACACTCCCATACACATGCAGAGGTCAGGCATCATATaGGCCACCACTTTAAAACCG +
Preference number: 4 (lower is better)
Translates to: KFSRIPAAHRDHTPIHMQRSGII*ATTLKP
Trigger: CGGTTTTAAAGTGGTGGCCCATATGATGCCTGACCT...CTGCATGTGTATGGGAGTGTGGTCCCTGTGAGCAGCCGGGATCCTACTAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp TCAATGTCTCTTTCTAGTCCCACGTTTGGCAGGTCAGGCATCATATGGGCCACCAGGTCAGGCATCATATaGGCCACCACTTTAAAACCG +
Preference number: 4 (lower is better)
Translates to: SMSLSSPTFGRSGIIWATRSGII*ATTLKP
Trigger: CGGTTTTAAAGTGGTGGCCCATATGATGCCTGACCT...GGTGGCCCATATGATGCCTGACCTGCCAAACGTGGGACTAGAAAGAGACATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp TGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGGCAGCTCTCGTACTATaGAGACACCTCCACCCAATT +
Preference number: 4 (lower is better)
Translates to: CRRVDWCGHYFSIFTMYGAALVL*RHLHPI
Trigger: AATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGC...CCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR CCA 90 bp CGGCTGCTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATGGAGTTCTATAATAATTCCTaGTGCCGACCCCTGATATCA +
Preference number: 4 (lower is better)
Translates to: RLLTGTTLPYTCSSRTMEFYNNS*CRPLIS
Trigger: TGATATCAGGGGTCGGCACCAGGAATTATTATAGAA...CTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAGCAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp CAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTGCAGAAGAGTGGACTaGTGTGGCCATTATTTCAGC +
Preference number: 4 (lower is better)
Translates to: QKSGLVWPLFQHLHHVRACRRVD*CGHYFS
Trigger: GCTGAAATAATGGCCACACCAGTCCACTCTTCTGCA...GGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR CCA 90 bp TCTTCACCATGTACGGGCCTTGTAATCTGTAGCCGATCTTTCTATAATAATTCCGGCGGATCTGGGGTGTaGTCAGCAGATGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: SSPCTGLVICSRSFYNNSGGSGV*SADDQP
Trigger: CGGCTGGTCATCTGCTGACCACACCCCAGATCCGCC...GGAATTATTATAGAAAGATCGGCTACAGATTACAAGGCCCGTACATGGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAATCAGCTCAGCAGGGCTaGGATCTCCTTTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAESAQQG*DLLSAS
Trigger: AGAAGCGGAAAGGAGATCTCAGCCCTGCTGAGCTGA...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000523687.5
CDS-3UTR TCA 90 bp ATATCCCTCTGTACTCGGTACACTCGAGTCCATGGAGGCACGAGGGCTAGGATCTTCCAATACACTTTGTaGGGCTTCTCTCAGAATACT +
Preference number: 4 (lower is better)
Translates to: ISLCTRYTRVHGGTRARIFQYTL*GFSQNT
Trigger: AGTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAA...GATCCTAGCCCTCGTGCCTCCATGGACTCGAGTGTACCGAGTACAGAGGGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTAATTTTGGCCAGGTGAAATaGCTCACACACTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: VDWCGHYFSIFTMYGPCNFGQVK*LTHCLH
Trigger: GTGAAGGCAGTGTGTGAGTCATTTCACCTGGCCAAA...ATTACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp ATCTCGACACTGTATTCCGAGGTCTTTCATTCTTGCAAGTGCCAGCTCTCTCAGGAATCTTTGGCCAGGTaGAATGACTCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: ISTLYSEVFHSCKCQLSQESLAR*NDSHTA
Trigger: GGCAGTGTGTGAGTCATTTCACCTGGCCAAAGATTC...CTGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCGGAATACAGTGTCGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTATCTGGGTCTTCGTATaGCAAGAATGTTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTIWVFV*QECFPA
Trigger: GGCTGGGAAACATTCTTGTCATACGAAGACCCAGAT...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TCACCATGTACGGGCCTTGTAATCTGTAGCCGATCTTTCTATAATAATTCCTGGGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SPCTGLVICSRSFYNNSWDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...CCAGGAATTATTATAGAAAGATCGGCTACAGATTACAAGGCCCGTACATGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR TCA 90 bp CGAAACGGAAAGTTTCTTCTGAACACTTGCGTAATCGTAGGAGGCCAATCAAAAGACCAGCCGTGGCCTTaGAGGCAGTTTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RNGKFLLNTCVIVGGQSKDQPWP*RQFPVS
Trigger: AGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTC...TTTTGATTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAACTTTCCGTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGAGTTTGCTCCTCGAATaGCAATCAGTTTTATTGCAT +
Preference number: 4 (lower is better)
Translates to: AQDRQTGKPNALWGPHLGSLLLE*QSVLLH
Trigger: ATGCAATAAAACTGATTGTCATTCGAGGAGCAAACT...CCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGTTAAATGTCGCTTCATaGAGTAATCTGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQLNVAS*SNLVWF
Trigger: AAACCAGACCAGATTACTGCATGAAGCGACATTTAA...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGCAATCTCCAGCCTTGTaGAGCCATAGGTCAACATGT +
Preference number: 4 (lower is better)
Translates to: LQKSGLVWPLFQHLHHVRQSPAL*SHRSTC
Trigger: ACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG...CCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp CTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATGGAGACACCTTTCCCAGCCACCATTTaGAACATAATCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: LTGTTLPYTCSSRTMETPFPATI*NIISPY
Trigger: GTAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAA...AGGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTTTCTTCTGAACACTTaGGTAATCGTAGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVFLLNT*VIVGGQ
Trigger: TTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAA...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CCTGTTGGTGTCTCTAGCCACATCTTCATAAACACTCTGCACCCCAATCTCCAGACACTCCCATACACATaGAGCTCTCGTACTATGGAG +
Preference number: 4 (lower is better)
Translates to: PVGVSSHIFINTLHPNLQTLPYT*SSRTME
Trigger: CTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGT...CTGGAGATTGGGGTGCAGAGTGTTTATGAAGATGTGGCTAGAGACACCAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGTATAATAATTCCTGGTaGCGACCCCTGATATCACAG +
Preference number: 4 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRYNNSW*RPLISQ
Trigger: CTGTGATATCAGGGGTCGGCACCAGGAATTATTATA...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTATAATAATTCCTGGTaGCGACCCCTGATATCACAG +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVYNNSW*RPLISQ
Trigger: CTGTGATATCAGGGGTCGGCACCAGGAATTATTATA...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGGACAATCAGTTTTATTaGATGAGTTATGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQDNQFY*MSYGVQ
Trigger: TTGGACACCATAACTCATGCAATAAAACTGATTGTC...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGGACAATCAGTTTTATTaGATGAGTTATGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLDNQFY*MSYGVQ
Trigger: TTGGACACCATAACTCATGCAATAAAACTGATTGTC...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR GCA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAACTTTCCCAGTCACACTaGTATTTATTTCTAAACATC +
Preference number: 4 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGELSQSH*YLFLNI
Trigger: GATGTTTAGAAATAAATAGCAGTGTGACTGGGAAAG...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGTTGGCCACTCCTCCTTaGACAGATGAGGATAGGTCT +
Preference number: 4 (lower is better)
Translates to: LRNPDSPCSAREDTAEEWLATPP*TDEDRS
Trigger: AGACCTATCCTCATCTGTGCAAGGAGGAGTGGCCAA...CCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521015.5
CDS-3UTR CCA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGATTTGGCAGCTGTCTTaGTTTTCACCTTATTTAGAT +
Preference number: 4 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDEIWQLS*FSPYLD
Trigger: ATCTAAATAAGGTGAAAACCAAGACAGCTGCCAAAT...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256398.13
ENST00000521015.5
CDS-3UTR CCA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGTGTAAAACTGATGTGTaGACATCTGTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRCKTDV*TSVGFA
Trigger: TGCAAACCCCACAGATGTCCACACATCAGTTTTACA...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCAGTGTAAGACTGGGTaGAATACTCAAAATCAGAAT +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQQCKTG*NTQNQN
Trigger: ATTCTGATTTTGAGTATTCCACCCAGTCTTACACTG...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000524103.5
CDS-3UTR CCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGATCTCTGTATTCTTCTaGAAGGGCCATAAACGTTCC +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVISVFF*KGHKRS
Trigger: GGAACGTTTATGGCCCTTCCAGAAGAATACAGAGAT...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGATCTCTGTATTCTTCTaGAAGGGCCATAAACGTTCC +
Preference number: 4 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRISVFF*KGHKRS
Trigger: GGAACGTTTATGGCCCTTCCAGAAGAATACAGAGAT...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp CAACCTGAGACTCCACCCGCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCCAATTCAACCTGGTATaGCCGTACTTTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: QPETPPAQDRQTGKPNALQFNLV*PYFVMN
Trigger: ATTCATCACAAAGTACGGCCATACCAGGTTGAATTG...GAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGCGGGTGGAGTCTCAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp CCATGCTCTACTCCTGAGCTAACTAAAGGCATTGGAATATCCCTCTGTACTCGGGCAGCTCTCGTACTATaGAGACACCTCCACCCAATT +
Preference number: 4 (lower is better)
Translates to: PCSTPELTKGIGISLCTRAALVL*RHLHPI
Trigger: AATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGC...CCGAGTACAGAGGGATATTCCAATGCCTTTAGTTAGCTCAGGAGTAGAGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGAAGAGTGGACTGGTGTaGCCATTATTTCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRKSGLV*PLFQHL
Trigger: AAGATGCTGAAATAATGGCCACACCAGTCCACTCTT...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGAAGAGTGGACTGGTGTaGCCATTATTTCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVKSGLV*PLFQHL
Trigger: AAGATGCTGAAATAATGGCCACACCAGTCCACTCTT...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAATTTGGCCAGGTGAAATaGCTCACACACTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVEFGQVK*LTHCLH
Trigger: GTGAAGGCAGTGTGTGAGTCATTTCACCTGGCCAAA...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGATCTGGGTCTTCGTATaGCAAGAATGTTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRNPDSPCSAREDTAEEWIWVFV*QECFPA
Trigger: GGCTGGGAAACATTCTTGTCATACGAAGACCCAGAT...CCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTTGTGGAAGCAAATCTTaGTTTAGGGGCACACAACCT +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTCGSKS*FRGTQP
Trigger: AGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACA...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TCACCATGTACGGGCCTTGTAATCTGTAGCCGATCTTTCTATAATAATTCCTGGGCAAAGTGCCTAGAGTaGACAGCTTCTGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SPCTGLVICSRSFYNNSWAKCLE*TASVVA
Trigger: GGCCACCACAGAAGCTGTTCACTCTAGGCACTTTGC...CCAGGAATTATTATAGAAAGATCGGCTACAGATTACAAGGCCCGTACATGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523357.5
CDS-3UTR GCA 90 bp CAACCTGAGACTCCACCCGCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTTAAATGTCGCTTCATaGAGTAATCTGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: QPETPPAQDRQTGKPNALLNVAS*SNLVWF
Trigger: AAACCAGACCAGATTACTGCATGAAGCGACATTTAA...GAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGCGGGTGGAGTCTCAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACTCAATCTCCAGCCTTGTaGAGCCATAGGTCAACATGT +
Preference number: 4 (lower is better)
Translates to: HRLSQNRPPAGLMQNVETQSPAL*SHRSTC
Trigger: ACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG...AGTTTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTTCTTCTGAACACTTaGGTAATCGTAGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: CQGGYCRRVDWCGHYFSIFLLNT*VIVGGQ
Trigger: TTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAA...GATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR GCA 90 bp TTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACACTCCCATACACATaGAGCTCTCGTACTATGGAG +
Preference number: 4 (lower is better)
Translates to: LRNPDSPCSAREDTAEEWTLPYT*SSRTME
Trigger: CTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGT...CCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CCATGCTCTACTCCTGAGCTAACTAAAGGCATTGGAATATCCCTCTGTACTCGGACACTCCCATACACATaGAGCTCTCGTACTATGGAG +
Preference number: 4 (lower is better)
Translates to: PCSTPELTKGIGISLCTRTLPYT*SSRTME
Trigger: CTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGT...CCGAGTACAGAGGGATATTCCAATGCCTTTAGTTAGCTCAGGAGTAGAGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp CACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACTACACTCCCATACACATaGAGCTCTCGTACTATGGAG +
Preference number: 4 (lower is better)
Translates to: HRLSQNRPPAGLMQNVETTLPYT*SSRTME
Trigger: CTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGT...AGTTTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CAGGGAGGATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCTATAATAATTCCTGGTaGCGACCCCTTGCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QGGYCRRVDWCGHYFSIFYNNSW*RPLAKC
Trigger: GCACTTTGCAAGGGGTCGGCACCAGGAATTATTATA...GAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATCCTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523357.5
CDS-3UTR CCA 90 bp GAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTAGTTTCGCCTTTAACTTaGGCATCAAGACCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: EWTGVAIISASSPCTGLVVSPLT*ASRPCD
Trigger: ATCGCAAGGTCTTGATGCCCAAGTTAAAGGCGAAAC...TACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519261.5
CDS-3UTR CCA 90 bp CAATCTCCAGCCTTGTGCAGCCATAGGTCAACATGTCACTTAAATGTCGCTTCAATGTGTGGACATCTGTaGGGTTTGCACATCACAGCC +
Preference number: 4 (lower is better)
Translates to: QSPALCSHRSTCHLNVASMCGHL*GLHITA
Trigger: GGCTGTGATGTGCAAACCCCACAGATGTCCACACAT...TGAAGCGACATTTAAGTGACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTTCATGCAGTAATCTaGTCTGGTTTCAATAGTAAT +
Preference number: 4 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQLHAVI*SGFNSN
Trigger: ATTACTATTGAAACCAGACCAGATTACTGCATGAAG...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAACTGCCTTCACAGTGTaGCCCCTGTTGGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAETAFTV*PLLVSL
Trigger: TAGAGACACCAACAGGGGCCACACTGTGAAGGCAGT...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGAGGTCAGGCATCATATaGGCCACCACTTTAAAACCG +
Preference number: 4 (lower is better)
Translates to: LRNPDSPCSAREDTAEEWRSGII*ATTLKP
Trigger: CGGTTTTAAAGTGGTGGCCCATATGATGCCTGACCT...CCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGCAATTCAACCTGGTATaGCCGTACTTTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVQFNLV*PYFVMN
Trigger: ATTCATCACAAAGTACGGCCATACCAGGTTGAATTG...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTTCTATAATAATTCCTaGTGCCGACCCCTGATATCA +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVFYNNS*CRPLIS
Trigger: TGATATCAGGGGTCGGCACCAGGAATTATTATAGAA...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTAATCTGTAGCTGCAGAAGAGTGGACTaGTGTGGCCATTATTTCAGC +
Preference number: 4 (lower is better)
Translates to: GVAIISASSPCTGLVICSCRRVD*CGHYFS
Trigger: GCTGAAATAATGGCCACACCAGTCCACTCTTCTGCA...GCTACAGATTACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR TCA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTTTGGCCAGGTGAAATaGCTCACACACTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEFGQVK*LTHCLH
Trigger: GTGAAGGCAGTGTGTGAGTCATTTCACCTGGCCAAA...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAATCTTTGGCCAGGTaGAATGACTCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEESLAR*NDSHTA
Trigger: GGCAGTGTGTGAGTCATTTCACCTGGCCAAAGATTC...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp CCTGTTGGTGTCTCTAGCCACATCTTCATAAACACTCTGCACCCCAATCTCCAGCCAATCAAAATGTCTTaGTCTGGGTCTTCGTATGAC +
Preference number: 4 (lower is better)
Translates to: PVGVSSHIFINTLHPNLQPIKMS*SGSSYD
Trigger: GTCATACGAAGACCCAGATCAAGACATTTTGATTGG...CTGGAGATTGGGGTGCAGAGTGTTTATGAAGATGTGGCTAGAGACACCAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp CTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LQKSGLVWPLFQHLHHVRVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...CCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR TCA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAATTTCCTGTTTCAACCTaGCTTTCTGTCCCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVEFPVST*LSVPRV
Trigger: TACCCTGGGGACAGAAAGTCAGGTTGAAACAGGAAA...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TCGAATAAAATAATCTCTGTATTCTTCTGGAAGGGCCATAAACGTTCCACCCATTCTCCTTTCCGCTTCTaGCTCATTTCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SNKIISVFFWKGHKRSTHSPFRF*LISAPP
Trigger: CGGCGGCGCAGAAATGAGGCAGAAGCGGAAAGGAGA...ATGGGTGGAACGTTTATGGCCCTTCCAGAAGAATACAGAGATTATTTTATTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518112.5
ENST00000523687.5
CDS-3UTR GCA 90 bp GAGGCTTCTCTCAGAATACTTGACTGCCTCGTAAATATTGTTGGAAGTATGTCCGACATCTGTGGGGTTTaGACATCACAGCCACGACAG +
Preference number: 4 (lower is better)
Translates to: EASLRILDCLVNIVGSMSDICGV*TSQPRQ
Trigger: CTGTCGTGGCTGTGATGTGCAAACCCCACAGATGTC...GGACATACTTCCAACAATATTTACGAGGCAGTCAAGTATTCTGAGAGAAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTTAAATGTCGCTTCATaGAGTAATCTGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVLNVAS*SNLVWF
Trigger: AAACCAGACCAGATTACTGCATGAAGCGACATTTAA...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGTCTCTCAGGTTACCATaGTCTACTCCTGAGCTAACT +
Preference number: 4 (lower is better)
Translates to: LRNPDSPCSAREDTAEEWSLRLP*STPELT
Trigger: AGTTAGCTCAGGAGTAGAGCATGGTAACCTGAGAGA...CCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACTTCTCTCAGGTTACCATaGTCTACTCCTGAGCTAACT +
Preference number: 4 (lower is better)
Translates to: HRLSQNRPPAGLMQNVETSLRLP*STPELT
Trigger: AGTTAGCTCAGGAGTAGAGCATGGTAACCTGAGAGA...AGTTTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR GCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTTTCCCAGCCACCATTTaGAACATAATCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTFPATI*NIISPY
Trigger: GTAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAA...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTTTTCTTCTGAACACTTaGGTAATCGTAGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTFLLNT*VIVGGQ
Trigger: TTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAA...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACACTCCCATACACATaGAGCTCTCGTACTATGGAG +
Preference number: 4 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVETLPYT*SSRTME
Trigger: CTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGT...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR GCA 90 bp ACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTAATCTGTACACTCCCATACACATaGAGCTCTCGTACTATGGAG +
Preference number: 4 (lower is better)
Translates to: TGVAIISASSPCTGLVICTLPYT*SSRTME
Trigger: CTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGT...ACAGATTACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR GCA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACCTCCATCAGCAGCATaGCAAATCCCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: QVMASVEANLDLGAHNLRPPSAA*QIPDAE
Trigger: TTCAGCATCAGGGATTTGGCATGCTGCTGATGGAGG...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAACCTCCATCAGCAGCATaGCAAATCCCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEPPSAA*QIPDAE
Trigger: TTCAGCATCAGGGATTTGGCATGCTGCTGATGGAGG...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGCCTCCATCAGCAGCATaGCAAATCCCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEPPSAA*QIPDAE
Trigger: TTCAGCATCAGGGATTTGGCATGCTGCTGATGGAGG...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GGTCTGGTTTCAATAGTAATTCCAATACACTTTGTGAGGCTTCTCTCAGAATACGCAGTTTCCAGTCTCTaGAGCTGCGGGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GLVSIVIPIHFVRLLSEYAVSSL*SCGMRV
Trigger: CACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGC...GTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAATTACTATTGAAACCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp CAACCTGAGACTCCACCCGCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCCTTTCCCAGTCACACTaGTATTTATTTCTAAACATC +
Preference number: 4 (lower is better)
Translates to: QPETPPAQDRQTGKPNALLSQSH*YLFLNI
Trigger: GATGTTTAGAAATAAATAGCAGTGTGACTGGGAAAG...GAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGCGGGTGGAGTCTCAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AAAATACAAAAATTAGCAGCGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCTGTAAAACTGATGTGTaGACATCTGTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: KIQKLAAAGACNPSYSGGCKTDV*TSVGFA
Trigger: TGCAAACCCCACAGATGTCCACACATCAGTTTTACA...GCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCGCTGCTAATTTTTGTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GGGAGGATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACATCTCTGTATTCTTCTaGAAGGGCCATAAACGTTCC +
Preference number: 4 (lower is better)
Translates to: GRILQKSGLVWPLFQHLHISVFF*KGHKRS
Trigger: GGAACGTTTATGGCCCTTCCAGAAGAATACAGAGAT...GTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGAGCAGCTCTCGTACTATaGAGACACCTCCACCCAATT +
Preference number: 4 (lower is better)
Translates to: QVMASVEANLDLGAHNLRAALVL*RHLHPI
Trigger: AATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGC...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp CTCCCATACACATGCAGCTCTCGTACTATGGAGACACCTCCACCCAATTCGAAAAAGAGTGGACTGGTGTaGCCATTATTTCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: LPYTCSSRTMETPPPNSKKSGLV*PLFQHL
Trigger: AAGATGCTGAAATAATGGCCACACCAGTCCACTCTT...TTTCGAATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR CAA 72 bp TCACATCTCGACACTGTATTCCGAGGTCTTTCATTCTaGCAAGTGCCAGCTCTCTCAGGTTACCATGCTCTA +
Preference number: 4 (lower is better)
Translates to: SHLDTVFRGLSF*QVPALSGYHAL
Trigger: TAGAGCATGGTAACCTGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCGGAATACAGTGTCGAGATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GTTTCAATAGTAATTCCAATACACTTTGTGAGGCTTCTCTCAGAATACTTGACTGGTGTGGTCAGCAGATaGCCAGCCGTGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VSIVIPIHFVRLLSEYLTGVVSR*PAVALK
Trigger: CTTCAAGGCCACGGCTGGTCATCTGCTGACCACACC...AGTCAAGTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAATTACTATTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp TCAATGTCTCTTTCTAGTCCCACGTTTGGCAGGTCAGGCATCATATGGGCCACCAGTTTGCTCCTCGAATaGCAATCAGTTTTATTGCAT +
Preference number: 4 (lower is better)
Translates to: SMSLSSPTFGRSGIIWATSLLLE*QSVLLH
Trigger: ATGCAATAAAACTGATTGTCATTCGAGGAGCAAACT...GGTGGCCCATATGATGCCTGACCTGCCAAACGTGGGACTAGAAAGAGACATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518112.5
CDS-3UTR TCA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTTTCCTGTTTCAACCTaGCTTTCTGTCCCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEFPVST*LSVPRV
Trigger: TACCCTGGGGACAGAAAGTCAGGTTGAAACAGGAAA...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GTACTATGGAGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTCTGAACACTCAATCTCCAGCCTTGTaGAGCCATAGGTCAACATGT +
Preference number: 4 (lower is better)
Translates to: VLWRHLHPIRNGKFLLNTQSPAL*SHRSTC
Trigger: ACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG...AGTGTTCAGAAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCATAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp CCATGCTCTACTCCTGAGCTAACTAAAGGCATTGGAATATCCCTCTGTACTCGGTTCCCAGCCACCATTTaGAACATAATCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: PCSTPELTKGIGISLCTRFPATI*NIISPY
Trigger: GTAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAA...CCGAGTACAGAGGGATATTCCAATGCCTTTAGTTAGCTCAGGAGTAGAGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp TTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGTTTCTTCTGAACACTTaGGTAATCGTAGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LRNPDSPCSAREDTAEEWFLLNT*VIVGGQ
Trigger: TTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAA...CCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGCTTTCCCAGTCACACTaGTATTTATTTCTAAACATC +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVLSQSH*YLFLNI
Trigger: GATGTTTAGAAATAAATAGCAGTGTGACTGGGAAAG...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTAATTCTAGCTATTCTTTCTaGTTCCTCCACCCAATTCGA +
Preference number: 4 (lower is better)
Translates to: VDWCGHYFSIFTMYGPCNSSYSF*FLHPIR
Trigger: TCGAATTGGGTGGAGGAAGCAGAAAGAATAGCTAGA...ATTACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517975.1
CDS-3UTR CCA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGATTTGGCAGCTGTCTTaGTTTTCACCTTATTTAGAT +
Preference number: 4 (lower is better)
Translates to: ILILRVLPGRILQKSGLVIWQLS*FSPYLD
Trigger: ATCTAAATAAGGTGAAAACCAAGACAGCTGCCAAAT...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256398.13
ENST00000521015.5
CDS-3UTR CCA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAGTTTCGCCTTTAACTTaGGCATCAAGACCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVEVSPLT*ASRPCD
Trigger: ATCGCAAGGTCTTGATGCCCAAGTTAAAGGCGAAAC...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTTTCTATAATAATTCCTaGTGCCGACCCCTGATATCA +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTFYNNS*CRPLIS
Trigger: TGATATCAGGGGTCGGCACCAGGAATTATTATAGAA...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGCAGAAGAGTGGACTaGTGTGGCCATTATTTCAGC +
Preference number: 4 (lower is better)
Translates to: YLRNPDSPCSAREDTAEECRRVD*CGHYFS
Trigger: GCTGAAATAATGGCCACACCAGTCCACTCTTCTGCA...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp CACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACTTTCTATAATAATTCCTaGTGCCGACCCCTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: HRLSQNRPPAGLMQNVETFYNNS*CRPLAK
Trigger: CTTTGCAAGGGGTCGGCACCAGGAATTATTATAGAA...AGTTTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523357.5
CDS-3UTR TCA 90 bp CAGGGAGGATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCTTCTCTCAGAATACTTaGCTGCCTCGTAAATATTGT +
Preference number: 4 (lower is better)
Translates to: QGGYCRRVDWCGHYFSIFFSQNT*LPRKYC
Trigger: ACAATATTTACGAGGCAGTCAAGTATTCTGAGAGAA...GAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATCCTCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp AGGTCAACATGTCACTTAAATGTCGCTTCATGCAGTAATCTGGTCTGGTTTCAAGAATCTTTGGCCAGGTaGAATGACTCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: RSTCHLNVASCSNLVWFQESLAR*NDSHTA
Trigger: GGCAGTGTGTGAGTCATTTCACCTGGCCAAAGATTC...TTGAAACCAGACCAGATTACTGCATGAAGCGACATTTAAGTGACATGTTGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAATGTGGAAGCAAATCTTaGTTTAGGGGCACACAACCT +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAECGSKS*FRGTQP
Trigger: AGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACA...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CATTTGCAACATAATCTCTCCTTACCAATTCAACCTGGTATGGCCGTACTTTGTTCGATGTCTTTCCCCTaGTCGTGGGCTTCAATCAGT +
Preference number: 4 (lower is better)
Translates to: HLQHNLSLPIQPGMAVLCSMSFP*SWASIS
Trigger: ACTGATTGAAGCCCACGAGCAGGGGAAAGACATCGA...ACAAAGTACGGCCATACCAGGTTGAATTGGTAAGGAGAGATTATGTTGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518112.5
ENST00000523687.5
CDS-3UTR GCA 90 bp TACTCAAAATCAGAATCAGGTCCACCAGGGCAGTATACACATATATTTCCTGTAGACATCTGTGGGGTTTaGACATCACAGCCACGACAG +
Preference number: 4 (lower is better)
Translates to: YSKSESGPPGQYTHIFPVDICGV*TSQPRQ
Trigger: CTGTCGTGGCTGTGATGTGCAAACCCCACAGATGTC...TACAGGAAATATATGTGTATACTGCCCTGGTGGACCTGATTCTGATTTTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518112.5
CDS-3UTR GCA 90 bp AGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTTAAATGTCGCTTCATaGAGTAATCTGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RRVDWCGHYFSIFTMYGPLNVAS*SNLVWF
Trigger: AAACCAGACCAGATTACTGCATGAAGCGACATTTAA...AGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTCTCTCAGGTTACCATaGTCTACTCCTGAGCTAACT +
Preference number: 4 (lower is better)
Translates to: YLRNPDSPCSAREDTAEESLRLP*STPELT
Trigger: AGTTAGCTCAGGAGTAGAGCATGGTAACCTGAGAGA...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GAGAGTAACTCTTATATCTTCCTGATTTCCAAAGCTCATAAAGCCCGGTCCCACTCTCTCAGGTTACCATaGTCTACTCCTGAGCTAACT +
Preference number: 4 (lower is better)
Translates to: ESNSYIFLISKAHKARSHSLRLP*STPELT
Trigger: AGTTAGCTCAGGAGTAGAGCATGGTAACCTGAGAGA...GTGGGACCGGGCTTTATGAGCTTTGGAAATCAGGAAGATATAAGAGTTACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTTGTTTTCCATTGTTTTaGTTTCACACACGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTCFPLF*FHTRVE
Trigger: TTCAACCCGTGTGTGAAAGCAAAACAATGGAAAACA...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGTTTCGCCTTTAACTTaGGCATCAAGACCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEVSPLT*ASRPCD
Trigger: ATCGCAAGGTCTTGATGCCCAAGTTAAAGGCGAAAC...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGAGTTTCGCCTTTAACTTaGGCATCAAGACCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: QVMASVEANLDLGAHNLRVSPLT*ASRPCD
Trigger: ATCGCAAGGTCTTGATGCCCAAGTTAAAGGCGAAAC...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256398.13
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTCAGTGTAAGACTGGGTaGAATACTCAAAATCAGAAT +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTQCKTG*NTQNQN
Trigger: ATTCTGATTTTGAGTATTCCACCCAGTCTTACACTG...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000524103.5
CDS-3UTR CCA 90 bp GGTCTGGTTTCAATAGTAATTCCAATACACTTTGTGAGGCTTCTCTCAGAATACACTGCCTTCACAGTGTaGCCCCTGTTGGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: GLVSIVIPIHFVRLLSEYTAFTV*PLLVSL
Trigger: TAGAGACACCAACAGGGGCCACACTGTGAAGGCAGT...GTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAATTACTATTGAAACCAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp ATCGTAGGAGGCCAATCAAAATGTCTTGATCTGGGTCTTCGTATGACAAGAATGAGGTCAGGCATCATATaGGCCACCACTTTAAAACCG +
Preference number: 4 (lower is better)
Translates to: IVGGQSKCLDLGLRMTRMRSGII*ATTLKP
Trigger: CGGTTTTAAAGTGGTGGCCCATATGATGCCTGACCT...CATTCTTGTCATACGAAGACCCAGATCAAGACATTTTGATTGGCCTCCTACGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp CACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACTCAATTCAACCTGGTATaGCCGTACTTTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: HRLSQNRPPAGLMQNVETQFNLV*PYFVMN
Trigger: ATTCATCACAAAGTACGGCCATACCAGGTTGAATTG...AGTTTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGGTCAACATGTCACTTAAATGTCGCTTCATGCAGTAATCTGGTCTGGTTTCAAGCAGCTCTCGTACTATaGAGACACCTCCACCCAATT +
Preference number: 4 (lower is better)
Translates to: RSTCHLNVASCSNLVWFQAALVL*RHLHPI
Trigger: AATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGC...TTGAAACCAGACCAGATTACTGCATGAAGCGACATTTAAGTGACATGTTGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAAAGAGTGGACTGGTGTaGCCATTATTTCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVEKSGLV*PLFQHL
Trigger: AAGATGCTGAAATAATGGCCACACCAGTCCACTCTT...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAATTCCAATACACTTTGTaGGGCTTCTCTCAGAATACT +
Preference number: 4 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVEFQYTL*GFSQNT
Trigger: AGTATTCTGAGAGAAGCCTCACAAAGTGTATTGGAA...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR TCA 90 bp CATTTGCAACATAATCTCTCCTTACCAATTCAACCTGGTATGGCCGTACTTTGTATCTGGGTCTTCGTATaGCAAGAATGTTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HLQHNLSLPIQPGMAVLCIWVFV*QECFPA
Trigger: GGCTGGGAAACATTCTTGTCATACGAAGACCCAGAT...ACAAAGTACGGCCATACCAGGTTGAATTGGTAAGGAGAGATTATGTTGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGCCAATCAAAATGTCTTaGTCTGGGTCTTCGTATGAC +
Preference number: 4 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEPIKMS*SGSSYD
Trigger: GTCATACGAAGACCCAGATCAAGACATTTTGATTGG...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp ATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTATTCCCAGCCACCATTTaGAACATAATCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: ILQKSGLVWPLFQHLHHVFPATI*NIISPY
Trigger: GTAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAA...TACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR GCA 90 bp TCTACTCCTGAGCTAACTAAAGGCATTGGAATATCCCTCTGTACTCGGTACACTTTCCCAGCCACCATTTaGAACATAATCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: STPELTKGIGISLCTRYTFPATI*NIISPY
Trigger: GTAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAA...AGTGTACCGAGTACAGAGGGATATTCCAATGCCTTTAGTTAGCTCAGGAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp AGCCGATCTTTCTATAATAATTCCTGGTGCCGACCCCTGATATCACAGCGATTTTTTCTTCTGAACACTTaGGTAATCGTAGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: SRSFYNNSWCRPLISQRFFLLNT*VIVGGQ
Trigger: TTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAA...AAATCGCTGTGATATCAGGGGTCGGCACCAGGAATTATTATAGAAAGATCGGCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAATATAATAATTCCTGGTaGCGACCCCTGATATCACAG +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEYNNSW*RPLISQ
Trigger: CTGTGATATCAGGGGTCGGCACCAGGAATTATTATA...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR GCA 90 bp AGCCATAGGTCAACATGTCACTTAAATGTCGCTTCATGCAGTAATCTGGTCTGGTATAATAATTCCTGGTaGCGACCCCTGATATCACAG +
Preference number: 4 (lower is better)
Translates to: SHRSTCHLNVASCSNLVWYNNSW*RPLISQ
Trigger: CTGTGATATCAGGGGTCGGCACCAGGAATTATTATA...CCAGACCAGATTACTGCATGAAGCGACATTTAAGTGACATGTTGACCTATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp CACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACTTGTTTTCCATTGTTTTaGTTTCACACACGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: HRLSQNRPPAGLMQNVETCFPLF*FHTRVE
Trigger: TTCAACCCGTGTGTGAAAGCAAAACAATGGAAAACA...AGTTTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp TTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGTGTTTTCCATTGTTTTaGTTTCACACACGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: LRNPDSPCSAREDTAEEWCFPLF*FHTRVE
Trigger: TTCAACCCGTGTGTGAAAGCAAAACAATGGAAAACA...CCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp ATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTATGTAAAACTGATGTGTaGACATCTGTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: ILQKSGLVWPLFQHLHHVCKTDV*TSVGFA
Trigger: TGCAAACCCCACAGATGTCCACACATCAGTTTTACA...TACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTCTTCATGCAGTAATCTaGTCTGGTTTCAATAGTAAT +
Preference number: 4 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTLHAVI*SGFNSN
Trigger: ATTACTATTGAAACCAGACCAGATTACTGCATGAAG...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TCGAATAAAATAATCTCTGTATTCTTCTGGAAGGGCCATAAACGTTCCACCCATGCAGCTCTCGTACTATaGAGACACCTCCACCCAATT +
Preference number: 4 (lower is better)
Translates to: SNKIISVFFWKGHKRSTHAALVL*RHLHPI
Trigger: AATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGC...ATGGGTGGAACGTTTATGGCCCTTCCAGAAGAATACAGAGATTATTTTATTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp ACTATGGAGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTCTGAACACTTGAAGAGTGGACTGGTGTaGCCATTATTTCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: TMETPPPNSKRKVSSEHLKSGLV*PLFQHL
Trigger: AAGATGCTGAAATAATGGCCACACCAGTCCACTCTT...CAAGTGTTCAGAAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAAAGAGTGGACTGGTGTaGCCATTATTTCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEKSGLV*PLFQHL
Trigger: AAGATGCTGAAATAATGGCCACACCAGTCCACTCTT...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TCACCATGTACGGGCCTTGTAATCTGTAGCCGATCTTTCTATAATAATTCCTGGATTTGGCAGCTGTCTTaGTTTTCACCCTTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: SPCTGLVICSRSFYNNSWIWQLS*FSPFPL
Trigger: AAGCGGAAAGGGTGAAAACCAAGACAGCTGCCAAAT...CCAGGAATTATTATAGAAAGATCGGCTACAGATTACAAGGCCCGTACATGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519261.5
CDS-3UTR CCA 90 bp GTGAACTGTTCAATGTCTCTTTCTAGTCCCACGTTTGGCAGGTCAGGCATCATAAGCTCTCATGGAGGTTaGACACATATATTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: VNCSMSLSSPTFGRSGIISSHGG*THIFPV
Trigger: TACAGGAAATATATGTGTCCAACCTCCATGAGAGCT...TATGATGCCTGACCTGCCAAACGTGGGACTAGAAAGAGACATTGAACAGTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519261.5
ENST00000523687.5
3UTR CAA 72 bp TTCAACCTGGTATGGCCGTACTTTGTGATGAATTTCTaGGATTCCAACTTCTCTGGTTCTCACATCTCGACA +
Preference number: 4 (lower is better)
Translates to: FNLVWPYFVMNF*DSNFSGSHIST
Trigger: TGTCGAGATGTGAGAACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAAGTACGGCCATACCAGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
3UTR CAA 72 bp GGTCTTCGTATGACAAGAATGTTTCCCAGCCACCATTaGCAACATAATCTCTCCTTACCAATTCAACCTGGT +
Preference number: 4 (lower is better)
Translates to: GLRMTRMFPSHH*QHNLSLPIQPG
Trigger: ACCAGGTTGAATTGGTAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAAACATTCTTGTCATACGAAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp TCACCATGTACGGGCCTTGTAATCTGTAGCCGATCTTTCTATAATAATTCCTGGCCAATCAAAATGTCTTaGTCTGGGTCTTCGTATGAC +
Preference number: 4 (lower is better)
Translates to: SPCTGLVICSRSFYNNSWPIKMS*SGSSYD
Trigger: GTCATACGAAGACCCAGATCAAGACATTTTGATTGG...CCAGGAATTATTATAGAAAGATCGGCTACAGATTACAAGGCCCGTACATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR GCA 90 bp TCTTCACCATGTACGGGCCTTGTAATCTGTAGCCGATCTTTCTATAATAATTCCTCTCTCAGGTTACCATaGTCTACTCCTGAGCTAACT +
Preference number: 4 (lower is better)
Translates to: SSPCTGLVICSRSFYNNSSLRLP*STPELT
Trigger: AGTTAGCTCAGGAGTAGAGCATGGTAACCTGAGAGA...GGAATTATTATAGAAAGATCGGCTACAGATTACAAGGCCCGTACATGGTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp TTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGGACAATCAGTTTTATTaGATGAGTTATGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LRNPDSPCSAREDTAEEWDNQFY*MSYGVQ
Trigger: TTGGACACCATAACTCATGCAATAAAACTGATTGTC...CCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR CCA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACAATTCAACCTGGTATaGCCGTACTTTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: QVMASVEANLDLGAHNLRQFNLV*PYFVMN
Trigger: ATTCATCACAAAGTACGGCCATACCAGGTTGAATTG...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGCAATTCAACCTGGTATaGCCGTACTTTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEQFNLV*PYFVMN
Trigger: ATTCATCACAAAGTACGGCCATACCAGGTTGAATTG...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAACAATTCAACCTGGTATaGCCGTACTTTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEQFNLV*PYFVMN
Trigger: ATTCATCACAAAGTACGGCCATACCAGGTTGAATTG...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTTCTATAATAATTCCTaGTGCCGACCCCTGATATCA +
Preference number: 4 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEFYNNS*CRPLIS
Trigger: TGATATCAGGGGTCGGCACCAGGAATTATTATAGAA...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CCA 90 bp AGCCATAGGTCAACATGTCACTTAAATGTCGCTTCATGCAGTAATCTGGTCTGGTTCTATAATAATTCCTaGTGCCGACCCCTGATATCA +
Preference number: 4 (lower is better)
Translates to: SHRSTCHLNVASCSNLVWFYNNS*CRPLIS
Trigger: TGATATCAGGGGTCGGCACCAGGAATTATTATAGAA...CCAGACCAGATTACTGCATGAAGCGACATTTAAGTGACATGTTGACCTATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTTCTCTCAGAATACTTaGCTGCCTCGTAAATATTGT +
Preference number: 4 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEFSQNT*LPRKYC
Trigger: ACAATATTTACGAGGCAGTCAAGTATTCTGAGAGAA...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAATTCTCTCAGAATACTTaGCTGCCTCGTAAATATTGT +
Preference number: 4 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEFSQNT*LPRKYC
Trigger: ACAATATTTACGAGGCAGTCAAGTATTCTGAGAGAA...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR TCA 90 bp TCTTCACCATGTACGGGCCTTGTAATCTGTAGCCGATCTTTCTATAATAATTCCGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSPCTGLVICSRSFYNNSVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...GGAATTATTATAGAAAGATCGGCTACAGATTACAAGGCCCGTACATGGTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR TCA 90 bp GCATCTTCACCATGTACGGGCCTTGTAATCTGTAGCCGATCTTTCTATAATAATGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ASSPCTGLVICSRSFYNNVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...ATTATTATAGAAAGATCGGCTACAGATTACAAGGCCCGTACATGGTGAAGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR TCA 90 bp AGGTCAACATGTCACTTAAATGTCGCTTCATGCAGTAATCTGGTCTGGTTTCAAGTATTTAAGAAATCCTaGTTCTCCGTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RSTCHLNVASCSNLVWFQVFKKS*FSVFCQ
Trigger: CTGGCAGAACACGGAGAATCAGGATTTCTTAAATAC...TTGAAACCAGACCAGATTACTGCATGAAGCGACATTTAAGTGACATGTTGACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR TCA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGAGTTTGCTCCTCGAATaGCAATCAGTTTTATTGCAT +
Preference number: 4 (lower is better)
Translates to: YLRNPDSPCSAREDTAEESLLLE*QSVLLH
Trigger: ATGCAATAAAACTGATTGTCATTCGAGGAGCAAACT...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp GTACTATGGAGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTCTGAACACTTTAAATGTCGCTTCATaGAGTAATCTGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: VLWRHLHPIRNGKFLLNTLNVAS*SNLVWF
Trigger: AAACCAGACCAGATTACTGCATGAAGCGACATTTAA...AGTGTTCAGAAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCATAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAGACAATCAGTTTTATTaGATGAGTTATGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVEDNQFY*MSYGVQ
Trigger: TTGGACACCATAACTCATGCAATAAAACTGATTGTC...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CAATCTCCAGCCTTGTGCAGCCATAGGTCAACATGTCACTTAAATGTCGCTTCAGACAATCAGTTTTATTaGATGAGTTATGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: QSPALCSHRSTCHLNVASDNQFY*MSYGVQ
Trigger: TTGGACACCATAACTCATGCAATAAAACTGATTGTC...TGAAGCGACATTTAAGTGACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp GCATCTTCACCATGTACGGGCCTTGTAATCTGTAGCCGATCTTTCTATAATAATTGTAAAACTGATGTGTaGACATCTGTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: ASSPCTGLVICSRSFYNNCKTDV*TSVGFA
Trigger: TGCAAACCCCACAGATGTCCACACATCAGTTTTACA...ATTATTATAGAAAGATCGGCTACAGATTACAAGGCCCGTACATGGTGAAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAACTTCATGCAGTAATCTaGTCTGGTTTCAATAGTAAT +
Preference number: 4 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVELHAVI*SGFNSN
Trigger: ATTACTATTGAAACCAGACCAGATTACTGCATGAAG...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR TCA 90 bp GGTATGGCCGTACTTTGTGATGAATTTCTTGGATTCCAACTTCTCTGGTTCTCATTCTCTCAGAATACTTaGCTGCCTCGTAAATATTGT +
Preference number: 4 (lower is better)
Translates to: GMAVLCDEFLGFQLLWFSFSQNT*LPRKYC
Trigger: ACAATATTTACGAGGCAGTCAAGTATTCTGAGAGAA...TGAGAACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAAGTACGGCCATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR GCA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGAGACAATCAGTTTTATTaGATGAGTTATGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: QVMASVEANLDLGAHNLRDNQFY*MSYGVQ
Trigger: TTGGACACCATAACTCATGCAATAAAACTGATTGTC...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR GCA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTTTCCCAGTCACACTaGTATTTATTTCTAAACATC +
Preference number: 4 (lower is better)
Translates to: QVMASVEANLDLGAHNLRLSQSH*YLFLNI
Trigger: GATGTTTAGAAATAAATAGCAGTGTGACTGGGAAAG...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CCA 90 bp TCGAATAAAATAATCTCTGTATTCTTCTGGAAGGGCCATAAACGTTCCACCCATATCTCTGTATTCTTCTaGAAGGGCCATAAACGTTCC +
Preference number: 4 (lower is better)
Translates to: SNKIISVFFWKGHKRSTHISVFF*KGHKRS
Trigger: GGAACGTTTATGGCCCTTCCAGAAGAATACAGAGAT...ATGGGTGGAACGTTTATGGCCCTTCCAGAAGAATACAGAGATTATTTTATTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp TCTGGAAGGGCCATAAACGTTCCACCCATCACAATAAACTCCACTTTATCCACACTTCATGCAGTAATCTaGTCTGGTTTCAATAGTAAT +
Preference number: 4 (lower is better)
Translates to: SGRAINVPPITINSTLSTLHAVI*SGFNSN
Trigger: ATTACTATTGAAACCAGACCAGATTACTGCATGAAG...TGTGGATAAAGTGGAGTTTATTGTGATGGGTGGAACGTTTATGGCCCTTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp GCATCTTCACCATGTACGGGCCTTGTAATCTGTAGCCGATCTTTCTATAATAATTTCTATAATAATTCCTaGTGCCGACCCCTGATATCA +
Preference number: 4 (lower is better)
Translates to: ASSPCTGLVICSRSFYNNFYNNS*CRPLIS
Trigger: TGATATCAGGGGTCGGCACCAGGAATTATTATAGAA...ATTATTATAGAAAGATCGGCTACAGATTACAAGGCCCGTACATGGTGAAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CCA 90 bp AGGTCAACATGTCACTTAAATGTCGCTTCATGCAGTAATCTGGTCTGGTTTCAATTCTATAATAATTCCTaGTGCCGACCCCTGATATCA +
Preference number: 4 (lower is better)
Translates to: RSTCHLNVASCSNLVWFQFYNNS*CRPLIS
Trigger: TGATATCAGGGGTCGGCACCAGGAATTATTATAGAA...TTGAAACCAGACCAGATTACTGCATGAAGCGACATTTAAGTGACATGTTGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp GACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTGCCCACACCTCTGGGGACCACACTaGGGGCTGCCCACACTGCTC +
Preference number: 5 (lower is better)
Translates to: DRQESQTLSGDHTWGCPHLWGPH*GLPTLL
Trigger: GAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGAG...GTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCAGGCGGGAGAATCGCTaGAACCCGGGAGGCGGAGGA +
Preference number: 5 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFRRENR*NPGGGG
Trigger: TCCTCCGCCTCCCGGGTTCAAGCGATTCTCCCGCCT...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAACTCTGGGGACCACACTaGGGGCTGCCCACACTGCTC +
Preference number: 5 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGELWGPH*GLPTLL
Trigger: GAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGAG...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCTCTGGGGACCACACTaGGGGCTGCCCACACTGCTC +
Preference number: 5 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLLWGPH*GLPTLL
Trigger: GAGCAGTGTGGGCAGCCCCAAGTGTGGTCCCCAGAG...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGAGGCGGGAGAATCGCTaGAACCCGGGAGGCGGAGGA +
Preference number: 5 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLRRENR*NPGGGG
Trigger: TCCTCCGCCTCCCGGGTTCAAGCGATTCTCCCGCCT...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCCCCCAATCTCCAGCCTaGTGCAGCCATAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGPQSPA*CSHRST
Trigger: TGTTGACCTATGGCTGCACAAGGCTGGAGATTGGGG...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp AGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTCCCCAATCTCCAGCCTaGTGCAGCCATAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: RADLGCGQQMTSRGLEGSPQSPA*CSHRST
Trigger: TGTTGACCTATGGCTGCACAAGGCTGGAGATTGGGG...ACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGAGGATGCAGTGAGATaGCGCCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGEEDAVR*RHCTPA
Trigger: GGCTGGAGTGCAGTGGCGCAATCTCACTGCATCCTC...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCCAATCTCCAGCCTaGTGCAGCCATAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEAPQSPA*CSHRST
Trigger: TGTTGACCTATGGCTGCACAAGGCTGGAGATTGGGG...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGCTGCCCACACACAGTGTGGCCCCTGTaGGTGTCTCTAGCCACATCT +
Preference number: 5 (lower is better)
Translates to: DRQESQTLSGDHTWGCPHTVWPL*VSLATS
Trigger: AGATGTGGCTAGAGACACCAACAGGGGCCACACTGT...GTGTGGGCAGCCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCCGAGGTCTTTCATTCTaGCAAGTGCCAGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGRGLSF*QVPALS
Trigger: TGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCG...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGAGGCGGGAGAATCGCTaGAACCCGGGAGGCGGAGGA +
Preference number: 5 (lower is better)
Translates to: ILILRVLPGRILQKSGLVRRENR*NPGGGG
Trigger: TCCTCCGCCTCCCGGGTTCAAGCGATTCTCCCGCCT...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp AGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTGGTTTCGCCTTTAACTaGGGCATCAAGACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: RADLGCGQQMTSRGLEGSGFAFN*GIKTLR
Trigger: TCGCAAGGTCTTGATGCCCAAGTTAAAGGCGAAACC...ACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCCCCAATCTCCAGCCTaGTGCAGCCATAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLPQSPA*CSHRST
Trigger: TGTTGACCTATGGCTGCACAAGGCTGGAGATTGGGG...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGACAGTGTGGCCCCTGTaGGTGTCTCTAGCCACATCT +
Preference number: 5 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQTVWPL*VSLATS
Trigger: AGATGTGGCTAGAGACACCAACAGGGGCCACACTGT...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp AGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAACAGTGTGGCCCCTGTaGGTGTCTCTAGCCACATCT +
Preference number: 5 (lower is better)
Translates to: SRGLEGSFQSLQLRDEGETVWPL*VSLATS
Trigger: AGATGTGGCTAGAGACACCAACAGGGGCCACACTGT...TTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGACAGTGTGGCCCCTGTaGGTGTCTCTAGCCACATCT +
Preference number: 5 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDETVWPL*VSLATS
Trigger: AGATGTGGCTAGAGACACCAACAGGGGCCACACTGT...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCAACGCAAGTGATTTTTaGGGGTGCACGCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPNASDF*GCTQER
Trigger: CCTCTCCTGCGTGCACCCCAAAAAATCACTTGCGTT...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS TCA 90 bp ACTTGGGCATCAAGACCTTGCGATACTGAGGAGGGACGGCAGCAATaGTATCCACCAGGCGGGGCTGGGCAGAAAGGCCATATTTGGCAG +
Preference number: 5 (lower is better)
Translates to: TWASRPCDTEEGRQQ*YPPGGAGQKGHIWQ
Trigger: CTGCCAAATATGGCCTTTCTGCCCAGCCCCGCCTGGTGGATATCATTGCTGCCGTCCCTCCTCAGTATCGCAAGGTCTTGATGCCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000520270.5
ENST00000520288.5
ENST00000521015.5
ENST00000521099.1
ENST00000521570.5
ENST00000521938.5
ENST00000522063.1
ENST00000523760.5
ENST00000524103.5
ENST00000537665.2
CDS TCA 90 bp CTGATGGGTTTCGCCTTTAACTTGGGCATCAAGACCTTGCGATACTaGGGAGGGACGGCAGCAATGATATCCACCAGGCGGGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LMGFAFNLGIKTLRY*GGTAAMISTRRGWA
Trigger: TGCCCAGCCCCGCCTGGTGGATATCATTGCTGCCGTCCCTCCTCAGTATCGCAAGGTCTTGATGCCCAAGTTAAAGGCGAAACCCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000520270.5
ENST00000520288.5
ENST00000521015.5
ENST00000521099.1
ENST00000521570.5
ENST00000521938.5
ENST00000522063.1
ENST00000523760.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGGTTTCGCCTTTAACTaGGGCATCAAGACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGGFAFN*GIKTLR
Trigger: TCGCAAGGTCTTGATGCCCAAGTTAAAGGCGAAACC...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GAGAGGGCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCGTTCTATTCGGTGTCTaGTCTGTAGGAAAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: ERADLGCGQQMTSRGLEGVLFGV*SVGKGH
Trigger: ATGACCCTTTCCTACAGACAAGACACCGAATAGAAC...GCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGACAGTGTGGCCCCTGTaGGTGTCTCTAGCCACATCT +
Preference number: 5 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQTVWPL*VSLATS
Trigger: AGATGTGGCTAGAGACACCAACAGGGGCCACACTGT...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGAACGCAAGTGATTTTTaGGGGTGCACGCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLNASDF*GCTQER
Trigger: CCTCTCCTGCGTGCACCCCAAAAAATCACTTGCGTT...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTAGGCGGGAGAATCGCTaGAACCCGGGAGGCGGAGGA +
Preference number: 5 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTRRENR*NPGGGG
Trigger: TCCTCCGCCTCCCGGGTTCAAGCGATTCTCCCGCCT...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCTATTTGGCAGCTGTCTaGGTTTTCACCCTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPYLAAV*VFTLSA
Trigger: AGCGGAAAGGGTGAAAACCAAGACAGCTGCCAAATA...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp ACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGCAGAAAGGCCATATTaGGCAGCTGTCTTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: TSRGLEGSFQSLQLRDEGAERPY*AAVLVF
Trigger: GAAAACCAAGACAGCTGCCAAATATGGCCTTTCTGC...ACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGGGTTTCGCCTTTAACTaGGGCATCAAGACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLGFAFN*GIKTLR
Trigger: TCGCAAGGTCTTGATGCCCAAGTTAAAGGCGAAACC...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCTTTCTAGTCCCACGTTaGGCAGGTCAGGCATCATAT +
Preference number: 5 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPFLVPR*AGQASY
Trigger: ATATGATGCCTGACCTGCCAAACGTGGGACTAGAAA...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCTTTCTAGTCCCACGTTaGGCAGGTCAGGCATCATAT +
Preference number: 5 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFFLVPR*AGQASY
Trigger: ATATGATGCCTGACCTGCCAAACGTGGGACTAGAAA...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CTCTGTACTCGGTACACTCGAGTCCATGGAGGCACGAGGGCTAGGATCCGAGCCTTTCTAGTCCCACGTTaGGCAGGTCAGGCATCATAT +
Preference number: 5 (lower is better)
Translates to: LCTRYTRVHGGTRARIRAFLVPR*AGQASY
Trigger: ATATGATGCCTGACCTGCCAAACGTGGGACTAGAAA...GGCTCGGATCCTAGCCCTCGTGCCTCCATGGACTCGAGTGTACCGAGTACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCTTTCTAGTCCCACGTTaGGCAGGTCAGGCATCATAT +
Preference number: 5 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEAFLVPR*AGQASY
Trigger: ATATGATGCCTGACCTGCCAAACGTGGGACTAGAAA...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCGAGGTCTTTCATTCTaGCAAGTGCCAGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLRGLSF*QVPALS
Trigger: TGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCG...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCGTTTCTTCTGAACACTaGCGTAATCGTAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPVSSEH*RNRRRP
Trigger: TGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAAC...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCGTTTCTTCTGAACACTaGCGTAATCGTAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFVSSEH*RNRRRP
Trigger: TGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAAC...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCACACACGGGTTGAACTaGAACTCTTACCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPTHGLN*NSYLSP
Trigger: TGGAGAAAGGTAAGAGTTCAAGTTCAACCCGTGTGT...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS CCA 90 bp TATAGTCAGCATCATCAGCTCAGCAGGGCTGAGATCTCCAGACTATaGAGGATTCACCACCAGACCGGGAAGCAACATCCTGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: YSQHHQLSRAEISRL*RIHHQTGKQHPGLQ
Trigger: CTGGAGCCCAGGATGTTGCTTCCCGGTCTGGTGGTGAATCCTCCATAGTCTGGAGATCTCAGCCCTGCTGAGCTGATGATGCTGACTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521570.5
CDS CCA 90 bp TATAGTCAGCATCATCAGCTCAGCAGGGCTGAGATCTCCAGACTATaGAGGATTCACCACCAGACCAGGAAGCAACAGCCTGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: YSQHHQLSRAEISRL*RIHHQTRKQQPGLQ
Trigger: CTGGAGCCCAGGCTGTTGCTTCCTGGTCTGGTGGTGAATCCTCCATAGTCTGGAGATCTCAGCCCTGCTGAGCTGATGATGCTGACTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521015.5
CDS-3UTR CAA 90 bp CTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATGGAGACACCTACAGTGTGGCCCCTGTaGGTGTCTCTAGCCACATCT +
Preference number: 5 (lower is better)
Translates to: LTGTTLPYTCSSRTMETPTVWPL*VSLATS
Trigger: AGATGTGGCTAGAGACACCAACAGGGGCCACACTGT...AGGTGTCTCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGACAGTGTGGCCCCTGTaGGTGTCTCTAGCCACATCT +
Preference number: 5 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRTVWPL*VSLATS
Trigger: AGATGTGGCTAGAGACACCAACAGGGGCCACACTGT...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGTTTCTAGTCCCACGTTaGGCAGGTCAGGCATCATAT +
Preference number: 5 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLFLVPR*AGQASY
Trigger: ATATGATGCCTGACCTGCCAAACGTGGGACTAGAAA...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTTTCTAGTCCCACGTTaGGCAGGTCAGGCATCATAT +
Preference number: 5 (lower is better)
Translates to: DLGCGQQMTSRGLEGSFQFLVPR*AGQASY
Trigger: ATATGATGCCTGACCTGCCAAACGTGGGACTAGAAA...CTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CACACTTGGGGCTGCCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGAAGTAGACGAGGTCTTTCATTCTaGCAAGTGCCAGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: HTWGCPHCSVVAKRVGSRRGLSF*QVPALS
Trigger: TGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCG...TCTACTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCCTTTCCCAGCCACCATTaGCAACATAATCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: GLEGSFQSLQLRDEGEAPFPSHH*QHNLSL
Trigger: TAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAAA...GGGGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGGCTCATTTTCCTAACTaGCGCTCCAATGCGTATGTC +
Preference number: 5 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLAHFPN*RSNAYV
Trigger: GACATACGCATTGGAGCGCAAGTTAGGAAAATGAGC...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGAGGATGCAGTGAGATaGCGCCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTEDAVR*RHCTPA
Trigger: GGCTGGAGTGCAGTGGCGCAATCTCACTGCATCCTC...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGTATTTGGCAGCTGTCTaGGTTTTCACCCTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLYLAAV*VFTLSA
Trigger: AGCGGAAAGGGTGAAAACCAAGACAGCTGCCAAATA...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGGCAGAAAGGCCATATTaGGCAGCTGTCTTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQAERPY*AAVLVF
Trigger: GAAAACCAAGACAGCTGCCAAATATGGCCTTTCTGC...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CCGGCTGCTCACAGGGACCACACTCCCATACACATGCAGCTCTCGTACTATGGATTTCTAGTCCCACGTTaGGCAGGTCAGGCATCATAT +
Preference number: 5 (lower is better)
Translates to: PAAHRDHTPIHMQLSYYGFLVPR*AGQASY
Trigger: ATATGATGCCTGACCTGCCAAACGTGGGACTAGAAA...TCCATAGTACGAGAGCTGCATGTGTATGGGAGTGTGGTCCCTGTGAGCAGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp ATATCCCTCTGTACTCGGTACACTCGAGTCCATGGAGGCACGAGGGCTAGGATCCGAGGTCTTTCATTCTaGCAAGTGCCAGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: ISLCTRYTRVHGGTRARIRGLSF*QVPALS
Trigger: TGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCG...GATCCTAGCCCTCGTGCCTCCATGGACTCGAGTGTACCGAGTACAGAGGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp CGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCTTTCCCAGCCACCATTaGCAACATAATCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: RGLEGSFQSLQLRDEGEAFPSHH*QHNLSL
Trigger: TAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAAA...GGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp ATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGACACACGGGTTGAACTaGAACTCTTACCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: MTSRGLEGSFQSLQLRDETHGLN*NSYLSP
Trigger: TGGAGAAAGGTAAGAGTTCAAGTTCAACCCGTGTGT...CTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCCAATCCTGTTTTCCATaGTTTTGCTTTCACACACGG +
Preference number: 5 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPQSCFP*FCFHTR
Trigger: CCGTGTGTGAAAGCAAAACAATGGAAAACAGGATTG...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGGTTCTATTCGGTGTCTaGTCTGTAGGAAAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: AQDRQTGKPNALWGPHLGVLFGV*SVGKGH
Trigger: ATGACCCTTTCCTACAGACAAGACACCGAATAGAAC...CCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGCCCCAATCTCCAGCCTaGTGCAGCCATAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: LQKSGLVWPLFQHLHHVRPQSPA*CSHRST
Trigger: TGTTGACCTATGGCTGCACAAGGCTGGAGATTGGGG...CCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGGCTTTCACACACGGGTaGAACTTGAACTCTTACCTT +
Preference number: 5 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQAFTHG*NLNSYL
Trigger: AAGGTAAGAGTTCAAGTTCAACCCGTGTGTGAAAGC...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CACACTTGGGGCTGCCCACACTGCTCTGTAGTTGCCAAGAGGGTGGGAAGTAGAGCTTTCACACACGGGTaGAACTTGAACTCTTACCTT +
Preference number: 5 (lower is better)
Translates to: HTWGCPHCSVVAKRVGSRAFTHG*NLNSYL
Trigger: AAGGTAAGAGTTCAAGTTCAACCCGTGTGTGAAAGC...TCTACTTCCCACCCTCTTGGCAACTACAGAGCAGTGTGGGCAGCCCCAAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCAATCCTGTTTTCCATaGTTTTGCTTTCACACACGG +
Preference number: 5 (lower is better)
Translates to: GQQMTSRGLEGSFQSLQLQSCFP*FCFHTR
Trigger: CCGTGTGTGAAAGCAAAACAATGGAAAACAGGATTG...CAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GCGGATCTGGGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCTTTGTGATGAATTTCTaGGATTCCAACTTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: ADLGCGQQMTSRGLEGSFFVMNF*DSNFSG
Trigger: ACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAA...GAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCCCAGATCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCTGCGGGATGAGGGTGAAGCCCTTTGTGATGAATTTCTaGGATTCCAACTTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: VALKAVSSLCSCGMRVKPFVMNF*DSNFSG
Trigger: ACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAA...GGGCTTCACCCTCATCCCGCAGCTGCAGAGACTGGAAACTGCCTTCAAGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GCTCAGGATAGACAGACAGGAAAGCCAAACGCTCTCTGGGGACCACACTTGGGGTTTCCCAGCCACCATTaGCAACATAATCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: AQDRQTGKPNALWGPHLGFPSHH*QHNLSL
Trigger: TAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAAA...CCCCAAGTGTGGTCCCCAGAGAGCGTTTGGCTTTCCTGTCTGTCTATCCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGTTTCCCAGCCACCATTaGCAACATAATCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQFPSHH*QHNLSL
Trigger: TAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAAA...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp ATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGGTTTCTTCTGAACACTaGCGTAATCGTAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: ILILRVLPGRILQKSGLVVSSEH*RNRRRP
Trigger: TGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAAC...CACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGGAGGATGCAGTGAGATaGCGCCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEEDAVR*RHCTPA
Trigger: GGCTGGAGTGCAGTGGCGCAATCTCACTGCATCCTC...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGCAGCAATCCTGTTTTCCATaGTTTTGCTTTCACACACGG +
Preference number: 5 (lower is better)
Translates to: CGQQMTSRGLEGSFQSLQQSCFP*FCFHTR
Trigger: CCGTGTGTGAAAGCAAAACAATGGAAAACAGGATTG...CTGCAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGGTGGGCTTCAATCAGTaGTTTAATAACATCTCCTAT +
Preference number: 5 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLVGFNQ*FNNISY
Trigger: ATAGGAGATGTTATTAAACAACTGATTGAAGCCCAC...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000523687.5
CDS-3UTR CAA 90 bp TGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCGAGGTCTTTCATTCTaGCAAGTGCCAGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: CRRVDWCGHYFSIFTMYGRGLSF*QVPALS
Trigger: TGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCG...CCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp CCTGTTGGTGTCTCTAGCCACATCTTCATAAACACTCTGCACCCCAATCTCCAGCGAGGTCTTTCATTCTaGCAAGTGCCAGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: PVGVSSHIFINTLHPNLQRGLSF*QVPALS
Trigger: TGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCG...CTGGAGATTGGGGTGCAGAGTGTTTATGAAGATGTGGCTAGAGACACCAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp ACTCGGTACACTCGAGTCCATGGAGGCACGAGGGCTAGGATCCGAGCCACCAATTTTGTGATGAATTTCTaGGATTCCAACTTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: TRYTRVHGGTRARIRATNFVMNF*DSNFSG
Trigger: ACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAA...ATTGGTGGCTCGGATCCTAGCCCTCGTGCCTCCATGGACTCGAGTGTACCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp GGGTGTGGTCAGCAGATGACCAGCCGTGGCCTTGAAGGCAGTTTCCAGTCTCTGTTTGTGATGAATTTCTaGGATTCCAACTTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: GCGQQMTSRGLEGSFQSLFVMNF*DSNFSG
Trigger: ACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAA...CAGAGACTGGAAACTGCCTTCAAGGCCACGGCTGGTCATCTGCTGACCACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCGTTTCTTCTGAACACTaGCGTAATCGTAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: CQGGYCRRVDWCGHYFSIVSSEH*RNRRRP
Trigger: TGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAAC...GATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR CAA 90 bp CAATGTCTCTTTCTAGTCCCACGTTTGGCAGGTCAGGCATCATATGGGCCACCAGTTTCTTCTGAACACTaGCGTAATCGTAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: QCLFLVPRLAGQASYGPPVSSEH*RNRRRP
Trigger: TGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAAC...TGGTGGCCCATATGATGCCTGACCTGCCAAACGTGGGACTAGAAAGAGACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp GACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTAATCTGAACGCAAGTGATTTTTaGGGGTGCACGCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: DWCGHYFSIFTMYGPCNLNASDF*GCTQER
Trigger: CCTCTCCTGCGTGCACCCCAAAAAATCACTTGCGTT...CAGATTACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR CAA 90 bp GTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACTCCACCCGCTCAGGGCTTTCACACACGGGTaGAACTTGAACTCTTACCTT +
Preference number: 5 (lower is better)
Translates to: VEANLDLGAHNLRLHPLRAFTHG*NLNSYL
Trigger: AAGGTAAGAGTTCAAGTTCAACCCGTGTGTGAAAGC...CCTGAGCGGGTGGAGTCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS GCA 90 bp CTCTCAGAATACTCTCAGGTCTCTGTAGGTTCCTTTTGCTTCCGTTaGAGCTGTGCAAGTCTACGAAATTGTCTTCTGGGCCTGGTACCT +
Preference number: 5 (lower is better)
Translates to: LSEYSQVSVGSFCFR*SCASLRNCLLGLVP
Trigger: AGGTACCAGGCCCAGAAGACAATTTCGTAGACTTGCACAGCTGCAACGGAAGCAAAAGGAACCTACAGAGACCTGAGAGTATTCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520110.5
CDS CCA 90 bp GCTTCCGTTGCAGCTGTGCAAGTCTACGAAATTGTCTTCTGGGCCTaGTACCTAGCATTACCTAGCACTTCAGCTTTTCTCAGACAGGTA +
Preference number: 5 (lower is better)
Translates to: ASVAAVQVYEIVFWA*YLALPSTSAFLRQV
Trigger: TACCTGTCTGAGAAAAGCTGAAGTGCTAGGTAATGCTAGGTACCAGGCCCAGAAGACAATTTCGTAGACTTGCACAGCTGCAACGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520110.5
CDS-3UTR CAA 90 bp AAAATACAAAAATTAGCAGCGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCGCAGAAAGGCCATATTaGGCAGCTGTCTTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: KIQKLAAAGACNPSYSGGAERPY*AAVLVF
Trigger: GAAAACCAAGACAGCTGCCAAATATGGCCTTTCTGC...GCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCGCTGCTAATTTTTGTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256398.13
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGGGTTTCGCCTTTAACTaGGGCATCAAGACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: LRNPDSPCSAREDTAEEWGFAFN*GIKTLR
Trigger: TCGCAAGGTCTTGATGCCCAAGTTAAAGGCGAAACC...CCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000521015.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGCCCCAATCTCCAGCCTaGTGCAGCCATAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEPQSPA*CSHRST
Trigger: TGTTGACCTATGGCTGCACAAGGCTGGAGATTGGGG...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TCTGGAAGGGCCATAAACGTTCCACCCATCACAATAAACTCCACTTTATCCACAACAGTGTGGCCCCTGTaGGTGTCTCTAGCCACATCT +
Preference number: 5 (lower is better)
Translates to: SGRAINVPPITINSTLSTTVWPL*VSLATS
Trigger: AGATGTGGCTAGAGACACCAACAGGGGCCACACTGT...TGTGGATAAAGTGGAGTTTATTGTGATGGGTGGAACGTTTATGGCCCTTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAAACGCAAGTGATTTTTaGGGGTGCACGCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVENASDF*GCTQER
Trigger: CCTCTCCTGCGTGCACCCCAAAAAATCACTTGCGTT...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR CAA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGCTCATTTTCCTAACTaGCGCTCCAATGCGTATGTC +
Preference number: 5 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTAHFPN*RSNAYV
Trigger: GACATACGCATTGGAGCGCAAGTTAGGAAAATGAGC...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS CCA 90 bp CCTTTTGCTTCCGTTGCAGCTGTGCAAGTCTACGAAATTGTCTTCTaGGCCTGGTACCTAGCATTACCTAGCACTTCAGCTTTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: PFASVAAVQVYEIVF*AWYLALPSTSAFLR
Trigger: TCTGAGAAAAGCTGAAGTGCTAGGTAATGCTAGGTACCAGGCCCAGAAGACAATTTCGTAGACTTGCACAGCTGCAACGGAAGCAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520110.5
CDS-3UTR CAA 90 bp AGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGACTGTTCTATTCGGTGTCTaGTCTGTAGGAAAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: RNPDSPCSAREDTAEEWTVLFGV*SVGKGH
Trigger: ATGACCCTTTCCTACAGACAAGACACCGAATAGAAC...AGTCCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TGCCAGGGAGGATACTGCAGAAGAGTGGACTGGTGTGGCCATTATTTCAGCATCTTTCCCAGCCACCATTaGCAACATAATCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: CQGGYCRRVDWCGHYFSIFPSHH*QHNLSL
Trigger: TAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAAA...GATGCTGAAATAATGGCCACACCAGTCCACTCTTCTGCAGTATCCTCCCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR CAA 90 bp AGCCGATCTTTCTATAATAATTCCTGGTGCCGACCCCTGATATCACAGCGATTTAACGCAAGTGATTTTTaGGGGTGCACGCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SRSFYNNSWCRPLISQRFNASDF*GCTQER
Trigger: CCTCTCCTGCGTGCACCCCAAAAAATCACTTGCGTT...AAATCGCTGTGATATCAGGGGTCGGCACCAGGAATTATTATAGAAAGATCGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAAACGCAAGTGATTTTTaGGGGTGCACGCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: EYLRNPDSPCSAREDTAENASDF*GCTQER
Trigger: CCTCTCCTGCGTGCACCCCAAAAAATCACTTGCGTT...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGAACGCAAGTGATTTTTaGGGGTGCACGCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: YLRNPDSPCSAREDTAEENASDF*GCTQER
Trigger: CCTCTCCTGCGTGCACCCCAAAAAATCACTTGCGTT...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CTTCTGAACACTTGCGTAATCGTAGGAGGCCAATCAAAATGTCTTGATCTGGGTGGTTTCGCCTTTAACTaGGGCATCAAGACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: LLNTCVIVGGQSKCLDLGGFAFN*GIKTLR
Trigger: TCGCAAGGTCTTGATGCCCAAGTTAAAGGCGAAACC...ACCCAGATCAAGACATTTTGATTGGCCTCCTACGATTACGCAAGTGTTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519261.5
CDS-3UTR CAA 90 bp TTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTGGGTTCTATTCGGTGTCTaGTCTGTAGGAAAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: LRNPDSPCSAREDTAEEWVLFGV*SVGKGH
Trigger: ATGACCCTTTCCTACAGACAAGACACCGAATAGAAC...CCACTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GCAGCTCTCGTACTATGGAGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTGTTCTATTCGGTGTCTaGTCTGTAGGAAAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: AALVLWRHLHPIRNGKFLVLFGV*SVGKGH
Trigger: ATGACCCTTTCCTACAGACAAGACACCGAATAGAAC...AAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCATAGTACGAGAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp CACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACTGTTCTATTCGGTGTCTaGTCTGTAGGAAAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: HRLSQNRPPAGLMQNVETVLFGV*SVGKGH
Trigger: ATGACCCTTTCCTACAGACAAGACACCGAATAGAAC...AGTTTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TCTCCTTACCAATTCAACCTGGTATGGCCGTACTTTGTGATGAATTTCTTGGATCCCCAATCTCCAGCCTaGTGCAGCCATAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: SPYQFNLVWPYFVMNFLDPQSPA*CSHRST
Trigger: TGTTGACCTATGGCTGCACAAGGCTGGAGATTGGGG...ATCCAAGAAATTCATCACAAAGTACGGCCATACCAGGTTGAATTGGTAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAACGAGGTCTTTCATTCTaGCAAGTGCCAGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: EYLRNPDSPCSAREDTAERGLSF*QVPALS
Trigger: TGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCG...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACGAGGTCTTTCATTCTaGCAAGTGCCAGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: QVMASVEANLDLGAHNLRRGLSF*QVPALS
Trigger: TGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCG...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GAGTGGACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTATTTCCCAGCCACCATTaGCAACATAATCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: EWTGVAIISASSPCTGLVFPSHH*QHNLSL
Trigger: TAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAAA...TACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGTCCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000523357.5
ENST00000523687.5
CDS-3UTR CAA 90 bp CACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACTGCTTTCACACACGGGTaGAACTTGAACTCTTACCTT +
Preference number: 5 (lower is better)
Translates to: HRLSQNRPPAGLMQNVETAFTHG*NLNSYL
Trigger: AAGGTAAGAGTTCAAGTTCAACCCGTGTGTGAAAGC...AGTTTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CAATCTCCAGCCTTGTGCAGCCATAGGTCAACATGTCACTTAAATGTCGCTTCATATTTGGCAGCTGTCTaGGTTTTCACCCTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: QSPALCSHRSTCHLNVASYLAAV*VFTLSA
Trigger: AGCGGAAAGGGTGAAAACCAAGACAGCTGCCAAATA...TGAAGCGACATTTAAGTGACATGTTGACCTATGGCTGCACAAGGCTGGAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519261.5
CDS-3UTR CAA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTTTCTAGTCCCACGTTaGGCAGGTCAGGCATCATAT +
Preference number: 5 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEFLVPR*AGQASY
Trigger: ATATGATGCCTGACCTGCCAAACGTGGGACTAGAAA...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGTTTCTTCTGAACACTaGCGTAATCGTAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEVSSEH*RNRRRP
Trigger: TGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAAC...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGGTTTCTTCTGAACACTaGCGTAATCGTAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEVSSEH*RNRRRP
Trigger: TGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAAC...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGAGCTCATTTTCCTAACTaGCGCTCCAATGCGTATGTC +
Preference number: 5 (lower is better)
Translates to: QVMASVEANLDLGAHNLRAHFPN*RSNAYV
Trigger: GACATACGCATTGGAGCGCAAGTTAGGAAAATGAGC...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp TTTCACCGTCTGAGTCAAAATAGGCCACCTGCAGGCCTCATGCAAAATGTAGAAACACACGGGTTGAACTaGAACTCTTACCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: FHRLSQNRPPAGLMQNVETHGLN*NSYLSP
Trigger: TGGAGAAAGGTAAGAGTTCAAGTTCAACCCGTGTGT...TTCTACATTTTGCATGAGGCCTGCAGGTGGCCTATTTTGACTCAGACGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS GCA 90 bp TGCTTCCTCCACCCAATTCGAAACGGAAAGTTTCTTCTGAACACTTaGGTAATCGTAGGAGGCCAATCAAAATGTCTTGATCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: CFLHPIRNGKFLLNT*VIVGGQSKCLDLGL
Trigger: AAGACCCAGATCAAGACATTTTGATTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAACTTTCCGTTTCGAATTGGGTGGAGGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517975.1
CDS-3UTR CAA 90 bp AAAATACAAAAATTAGCAGCGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCTTTGTGATGAATTTCTaGGATTCCAACTTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: KIQKLAAAGACNPSYSGGFVMNF*DSNFSG
Trigger: ACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAA...GCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCGCTGCTAATTTTTGTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CTCGTACTATGGAGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTCTGAACTTTCCCAGCCACCATTaGCAACATAATCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: LVLWRHLHPIRNGKFLLNFPSHH*QHNLSL
Trigger: TAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAAA...GTTCAGAAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCATAGTACGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGAACACACGGGTTGAACTaGAACTCTTACCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: QVMASVEANLDLGAHNLRTHGLN*NSYLSP
Trigger: TGGAGAAAGGTAAGAGTTCAAGTTCAACCCGTGTGT...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CATTTGCAACATAATCTCTCCTTACCAATTCAACCTGGTATGGCCGTACTTTGTGCAGAAAGGCCATATTaGGCAGCTGTCTTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: HLQHNLSLPIQPGMAVLCAERPY*AAVLVF
Trigger: GAAAACCAAGACAGCTGCCAAATATGGCCTTTCTGC...ACAAAGTACGGCCATACCAGGTTGAATTGGTAAGGAGAGATTATGTTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519261.5
CDS-3UTR CAA 90 bp GGTATGGCCGTACTTTGTGATGAATTTCTTGGATTCCAACTTCTCTGGTTCTCAGTTCTATTCGGTGTCTaGTCTGTAGGAAAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: GMAVLCDEFLGFQLLWFSVLFGV*SVGKGH
Trigger: ATGACCCTTTCCTACAGACAAGACACCGAATAGAAC...TGAGAACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAAGTACGGCCATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAATTTCCCAGCCACCATTaGCAACATAATCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEFPSHH*QHNLSL
Trigger: TAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAAA...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000517975.1
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGACAATCCTGTTTTCCATaGTTTTGCTTTCACACACGG +
Preference number: 5 (lower is better)
Translates to: QVMASVEANLDLGAHNLRQSCFP*FCFHTR
Trigger: CCGTGTGTGAAAGCAAAACAATGGAAAACAGGATTG...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
ENST00000537665.2
CDS TCA 90 bp GACATTGGACTTCCCAACCTCCAAAGCTGTGAGCCAATACATTTTTaGCTGCCTCGTAAATATTGTTGGAAGTATGTCCTGATAAGGCAT +
Preference number: 5 (lower is better)
Translates to: DIGLPNLQSCEPIHF*LPRKYCWKYVLIRH
Trigger: ATGCCTTATCAGGACATACTTCCAACAATATTTACGAGGCAGTCAAAAATGTATTGGCTCACAGCTTTGGAGGTTGGGAAGTCCAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523760.5
CDS GCA 90 bp GCAGCTGTCTTGGTTTTCACCTTATTTAGATCGATGTCTTTCCCCTaGTCGTGGGCTTCAATCAGTTGTTTAATAACATCTCCTATAGTC +
Preference number: 5 (lower is better)
Translates to: AAVLVFTLFRSMSFP*SWASISCLITSPIV
Trigger: GACTATAGGAGATGTTATTAAACAACTGATTGAAGCCCACGAGCAGGGGAAAGACATCGATCTAAATAAGGTGAAAACCAAGACAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000520270.5
ENST00000520288.5
ENST00000521015.5
ENST00000521099.1
ENST00000521570.5
ENST00000521938.5
ENST00000523760.5
CDS GCA 90 bp CATCACAGCCACGACAGCAATTTATTTAGATCGATGTCTTTCCCCTaGTCGTGGGCTTCAATCAGTTGTTTAATAACATCTCCTATAGTC +
Preference number: 5 (lower is better)
Translates to: HHSHDSNLFRSMSFP*SWASISCLITSPIV
Trigger: GACTATAGGAGATGTTATTAAACAACTGATTGAAGCCCACGAGCAGGGGAAAGACATCGATCTAAATAAATTGCTGTCGTGGCTGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380353.8
ENST00000518112.5
ENST00000523687.5
CDS-3UTR CAA 90 bp ACTGGTGTGGCCATTATTTCAGCATCTTCACCATGTACGGGCCTTGTAATCTGTGTGGGCTTCAATCAGTaGTTTAATAACATCTCCTAT +
Preference number: 5 (lower is better)
Translates to: TGVAIISASSPCTGLVICVGFNQ*FNNISY
Trigger: ATAGGAGATGTTATTAAACAACTGATTGAAGCCCAC...ACAGATTACAAGGCCCGTACATGGTGAAGATGCTGAAATAATGGCCACACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518112.5
ENST00000523687.5
CDS-3UTR CAA 90 bp CGAAACGGAAAGTTTCTTCTGAACACTTGCGTAATCGTAGGAGGCCAATCAAAATTTCCCAGCCACCATTaGCAACATAATCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: RNGKFLLNTCVIVGGQSKFPSHH*QHNLSL
Trigger: TAAGGAGAGATTATGTTGCAAATGGTGGCTGGGAAA...TTTTGATTGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAACTTTCCGTTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp TCTGGTCTGGTTTCAATAGTAATTCCAATACACTTTGTGAGGCTTCTCTCAGAAGTTTCTTCTGAACACTaGCGTAATCGTAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: SGLVSIVIPIHFVRLLSEVSSEH*RNRRRP
Trigger: TGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAAC...TTCTGAGAGAAGCCTCACAAAGTGTATTGGAATTACTATTGAAACCAGACCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp TATGACCAAGTTGTTTTAACTGTTCTATTCGGTGTCTTGTCTGTAGGAAAGGGTGTTTCTTCTGAACACTaGCGTAATCGTAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: YDQVVLTVLFGVLSVGKGVSSEH*RNRRRP
Trigger: TGGCCTCCTACGATTACGCAAGTGTTCAGAAGAAAC...ACCCTTTCCTACAGACAAGACACCGAATAGAACAGTTAAAACAACTTGGTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp CAAGTAATGGCTTCTGTGGAAGCAAATCTTGATTTAGGGGCACACAACCTGAGAGTGGGCTTCAATCAGTaGTTTAATAACATCTCCTAT +
Preference number: 5 (lower is better)
Translates to: QVMASVEANLDLGAHNLRVGFNQ*FNNISY
Trigger: ATAGGAGATGTTATTAAACAACTGATTGAAGCCCAC...TCTCAGGTTGTGTGCCCCTAAATCAAGATTTGCTTCCACAGAAGCCATTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000521015.5
CDS-3UTR CAA 90 bp GAGTATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGTGGGCTTCAATCAGTaGTTTAATAACATCTCCTAT +
Preference number: 5 (lower is better)
Translates to: EYLRNPDSPCSAREDTAEVGFNQ*FNNISY
Trigger: ATAGGAGATGTTATTAAACAACTGATTGAAGCCCAC...TTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521015.5
ENST00000523687.5
CDS-3UTR CAA 90 bp ACTATGGAGACACCTCCACCCAATTCGAAACGGAAAGTTTCTTCTGAACACTTGGTGGGCTTCAATCAGTaGTTTAATAACATCTCCTAT +
Preference number: 5 (lower is better)
Translates to: TMETPPPNSKRKVSSEHLVGFNQ*FNNISY
Trigger: ATAGGAGATGTTATTAAACAACTGATTGAAGCCCAC...CAAGTGTTCAGAAGAAACTTTCCGTTTCGAATTGGGTGGAGGTGTCTCCATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518112.5
ENST00000523687.5
CDS-3UTR CAA 90 bp TATTTAAGAAATCCTGATTCTCCGTGTTCTGCCAGGGAGGATACTGCAGAAGAGTTTGTGATGAATTTCTaGGATTCCAACTTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: YLRNPDSPCSAREDTAEEFVMNF*DSNFSG
Trigger: ACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAA...CTCTTCTGCAGTATCCTCCCTGGCAGAACACGGAGAATCAGGATTTCTTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000519261.5
ENST00000521015.5
ENST00000523357.5
ENST00000523687.5
ENST00000524103.5
ENST00000537665.2
CDS-3UTR CAA 90 bp GGTATGGCCGTACTTTGTGATGAATTTCTTGGATTCCAACTTCTCTGGTTCTCATTTGTGATGAATTTCTaGGATTCCAACTTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: GMAVLCDEFLGFQLLWFSFVMNF*DSNFSG
Trigger: ACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAA...TGAGAACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAAGTACGGCCATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS-3UTR CAA 90 bp ATCGTAGGAGGCCAATCAAAATGTCTTGATCTGGGTCTTCGTATGACAAGAATGTTTGTGATGAATTTCTaGGATTCCAACTTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: IVGGQSKCLDLGLRMTRMFVMNF*DSNFSG
Trigger: ACCAGAGAAGTTGGAATCCAAGAAATTCATCACAAA...CATTCTTGTCATACGAAGACCCAGATCAAGACATTTTGATTGGCCTCCTACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518112.5
ENST00000519261.5
ENST00000523687.5
CDS CCA 72 bp GGAGGGACGGCAGCAATGATATCCACCAGGCGGGGCTaGGCAGAAAGGCCATATTTGGCAGCTGTCTTGGTT +
Preference number: 6 (lower is better)
Translates to: GGTAAMISTRRG*AERPYLAAVLV
Trigger: AACCAAGACAGCTGCCAAATATGGCCTTTCTGCCCAGCCCCGCCTGGTGGATATCATTGCTGCCGTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000520270.5
ENST00000520288.5
ENST00000521015.5
ENST00000521099.1
ENST00000521570.5
ENST00000521938.5
ENST00000523760.5
ENST00000524103.5
ENST00000537665.2
CDS CCA 72 bp CACCAGACCAGGAAGCAACAGCCTGGGCTCCAGAGTTaGCCACTCCTCCTTGCACAGATGAGGATAGGTCTC +
Preference number: 6 (lower is better)
Translates to: HQTRKQQPGLQS*PLLLAQMRIGL
Trigger: GAGACCTATCCTCATCTGTGCAAGGAGGAGTGGCCAACTCTGGAGCCCAGGCTGTTGCTTCCTGGTCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521015.5
CDS CAA 90 bp GAGGATTCACCACCAGACCAGGAAGCAACAGCCTGGGCTCCAGAGTaGGCCACTCCTCCTTGCACAGATGAGGATAGGTCTCCTGAAGCT +
Preference number: 6 (lower is better)
Translates to: EDSPPDQEATAWAPE*ATPPCTDEDRSPEA
Trigger: AGCTTCAGGAGACCTATCCTCATCTGTGCAAGGAGGAGTGGCCAACTCTGGAGCCCAGGCTGTTGCTTCCTGGTCTGGTGGTGAATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521015.5
CDS TCA 72 bp TTCTCAGGATCCCCTGGGGCTCTGTCACAGACCATGTaGGGTAGGAAGTGGGACTCTGTTCTGGAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: FSGSPGALSQTM*GRKWDSVLEAE
Trigger: CTCTGCCTCCAGAACAGAGTCCCACTTCCTACCTCACATGGTCTGTGACAGAGCCCCAGGGGATCCTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520270.5
CDS CAA 72 bp GTAGCGGATTCTCGCGGTAAAAGTTCGGTTCAGCATTaGATTGCCTGGGCGTTCGCCCCTTTCGGACCACCC +
Preference number: 6 (lower is better)
Translates to: VADSRGKSSVQH*IAWAFAPFGPP
Trigger: GGGTGGTCCGAAAGGGGCGAACGCCCAGGCAATCAAATGCTGAACCGAACTTTTACCGCGAGAATCCGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520288.5
CDS CCA 72 bp TATCCACCAGGCGGGGCTGGGCAGAAAGGCCATATTTaGCAGCTGTCTTGGTTTTCACCCTTTCCGCTTCTG +
Preference number: 6 (lower is better)
Translates to: YPPGGAGQKGHI*QLSWFSPFPLL
Trigger: CAGAAGCGGAAAGGGTGAAAACCAAGACAGCTGCCAAATATGGCCTTTCTGCCCAGCCCCGCCTGGTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000524103.5
ENST00000537665.2
CDS TCA 72 bp TTCGCCTTTAACTTGGGCATCAAGACCTTGCGATACTaGGGAGGGACGGCAGCAATGATATCCACCAGGCGG +
Preference number: 6 (lower is better)
Translates to: FAFNLGIKTLRY*GGTAAMISTRR
Trigger: CCGCCTGGTGGATATCATTGCTGCCGTCCCTCCTCAGTATCGCAAGGTCTTGATGCCCAAGTTAAAGGCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256398.13
ENST00000519261.5
ENST00000520270.5
ENST00000520288.5
ENST00000521015.5
ENST00000521099.1
ENST00000521570.5
ENST00000521938.5
ENST00000522063.1
ENST00000523760.5
ENST00000524103.5
ENST00000537665.2
CDS TCA 72 bp TGTTGCCCAGGCTGGTCTCGAACTCTTAGGCTCAAGTaGCCTGCTGTCACAGCCTTCCAAAGGGTTGGGATT +
Preference number: 6 (lower is better)
Translates to: CCPGWSRTLRLK*PAVTAFQRVGI
Trigger: AATCCCAACCCTTTGGAAGGCTGTGACAGCAGGTCACTTGAGCCTAAGAGTTCGAGACCAGCCTGGGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521938.5
CDS GCA 72 bp AGGGCTGAGATCTCCTTTCCGCTTCTGCCTCATTTCTaGGCCGCCGTAGCAGAGCCACCAGAGATAAAAATG +
Preference number: 6 (lower is better)
Translates to: RAEISFPLLPHF*AAVAEPPEIKM
Trigger: CATTTTTATCTCTGGTGGCTCTGCTACGGCGGCGCAGAAATGAGGCAGAAGCGGAAAGGAGATCTCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000521938.5
ENST00000523687.5
ENST00000523760.5
CDS CCA 72 bp CATCATCAGCTCAGCAGGGCTGAGATCTCCAGACTATaGAGGATTCACCACCAGACCGGGAAGCAACATCCT +
Preference number: 6 (lower is better)
Translates to: HHQLSRAEISRL*RIHHQTGKQHP
Trigger: AGGATGTTGCTTCCCGGTCTGGTGGTGAATCCTCCATAGTCTGGAGATCTCAGCCCTGCTGAGCTGATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521570.5
CDS CCA 72 bp CATCATCAGCTCAGCAGGGCTGAGATCTCCAGACTATaGAGGATTCACCACCAGACCAGGAAGCAACAGCCT +
Preference number: 6 (lower is better)
Translates to: HHQLSRAEISRL*RIHHQTRKQQP
Trigger: AGGCTGTTGCTTCCTGGTCTGGTGGTGAATCCTCCATAGTCTGGAGATCTCAGCCCTGCTGAGCTGATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521015.5
CDS CAA 72 bp ATATCCACCAGGCGGGGCTGGGCAGAAAGGCCATATTaGGCAGCTGTCTTGGTTTTCACCCTTTCCGCTTCT +
Preference number: 6 (lower is better)
Translates to: ISTRRGWAERPY*AAVLVFTLSAS
Trigger: AGAAGCGGAAAGGGTGAAAACCAAGACAGCTGCCAAATATGGCCTTTCTGCCCAGCCCCGCCTGGTGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000524103.5
ENST00000537665.2
CDS CAA 90 bp GCAGCAATGATATCCACCAGGCGGGGCTGGGCAGAAAGGCCATATTaGGCAGCTGTCTTGGTTTTCACCCTTTCCGCTTCTGCCTCATTT +
Preference number: 6 (lower is better)
Translates to: AAMISTRRGWAERPY*AAVLVFTLSASASF
Trigger: AAATGAGGCAGAAGCGGAAAGGGTGAAAACCAAGACAGCTGCCAAATATGGCCTTTCTGCCCAGCCCCGCCTGGTGGATATCATTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000524103.5
ENST00000537665.2
CDS GCA 72 bp TCTTGGTTTTCACCCTTTCCGCTTCTGCCTCATTTCTaGGCCGCCGTAGCAGAGCCACCAGAGATAAAAATG +
Preference number: 6 (lower is better)
Translates to: SWFSPFPLLPHF*AAVAEPPEIKM
Trigger: CATTTTTATCTCTGGTGGCTCTGCTACGGCGGCGCAGAAATGAGGCAGAAGCGGAAAGGGTGAAAACCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519261.5
ENST00000524103.5
ENST00000537665.2
CDS TCA 72 bp GCAGAGTTTGGACACTGGATCAAGTTGAGGACTAGCTaGAACAGGGCAGGGGTGGAAGCAACTTTCCATAAG +
Preference number: 6 (lower is better)
Translates to: AEFGHWIKLRTS*NRAGVEATFHK
Trigger: CTTATGGAAAGTTGCTTCCACCCCTGCCCTGTTTCAGCTAGTCCTCAACTTGATCCAGTGTCCAAACTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520270.5
CDS CCA 72 bp TATCCACCAGGCGGGGCTGGGCAGAAAGGCCATATTTaGCAGCTGTCTTGGTTTTCACCTTATTTAGATCGA +
Preference number: 6 (lower is better)
Translates to: YPPGGAGQKGHI*QLSWFSPYLDR
Trigger: TCGATCTAAATAAGGTGAAAACCAAGACAGCTGCCAAATATGGCCTTTCTGCCCAGCCCCGCCTGGTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000520270.5
ENST00000520288.5
ENST00000521015.5
ENST00000521099.1
ENST00000521570.5
ENST00000521938.5
ENST00000523760.5
CDS CCA 72 bp TCCGTTGCAGCTGTGCAAGTCTACGAAATTGTCTTCTaGGCCTGGTACCTAGCATTACCTAGCACTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SVAAVQVYEIVF*AWYLALPSTSA
Trigger: AGCTGAAGTGCTAGGTAATGCTAGGTACCAGGCCCAGAAGACAATTTCGTAGACTTGCACAGCTGCAACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520110.5
CDS CAA 72 bp ATATCCACCAGGCGGGGCTGGGCAGAAAGGCCATATTaGGCAGCTGTCTTGGTTTTCACCTTATTTAGATCG +
Preference number: 6 (lower is better)
Translates to: ISTRRGWAERPY*AAVLVFTLFRS
Trigger: CGATCTAAATAAGGTGAAAACCAAGACAGCTGCCAAATATGGCCTTTCTGCCCAGCCCCGCCTGGTGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000520270.5
ENST00000520288.5
ENST00000521015.5
ENST00000521099.1
ENST00000521570.5
ENST00000521938.5
ENST00000523760.5
CDS CAA 90 bp GCAGCAATGATATCCACCAGGCGGGGCTGGGCAGAAAGGCCATATTaGGCAGCTGTCTTGGTTTTCACCTTATTTAGATCGATGTCTTTC +
Preference number: 6 (lower is better)
Translates to: AAMISTRRGWAERPY*AAVLVFTLFRSMSF
Trigger: GAAAGACATCGATCTAAATAAGGTGAAAACCAAGACAGCTGCCAAATATGGCCTTTCTGCCCAGCCCCGCCTGGTGGATATCATTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000520270.5
ENST00000520288.5
ENST00000521015.5
ENST00000521099.1
ENST00000521570.5
ENST00000521938.5
ENST00000523760.5
CDS CAA 90 bp TCTCTCAGAATACTCTCAGGTCTCTGTAGGTTCCTTTTGCTTCCGTaGCAGCTGTGCAAGTCTACGAAATTGTCTTCTGGGCCTGGTACC +
Preference number: 6 (lower is better)
Translates to: SLRILSGLCRFLLLP*QLCKSTKLSSGPGT
Trigger: GGTACCAGGCCCAGAAGACAATTTCGTAGACTTGCACAGCTGCAACGGAAGCAAAAGGAACCTACAGAGACCTGAGAGTATTCTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520110.5
CDS GCA 72 bp TACTCTCAGGTCTCTGTAGGTTCCTTTTGCTTCCGTTaGAGCTGTGCAAGTCTACGAAATTGTCTTCTGGGC +
Preference number: 6 (lower is better)
Translates to: YSQVSVGSFCFR*SCASLRNCLLG
Trigger: GCCCAGAAGACAATTTCGTAGACTTGCACAGCTGCAACGGAAGCAAAAGGAACCTACAGAGACCTGAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520110.5
CDS CCA 72 bp GCAGCTGTGCAAGTCTACGAAATTGTCTTCTGGGCCTaGTACCTAGCATTACCTAGCACTTCAGCTTTTCTC +
Preference number: 6 (lower is better)
Translates to: AAVQVYEIVFWA*YLALPSTSAFL
Trigger: GAGAAAAGCTGAAGTGCTAGGTAATGCTAGGTACCAGGCCCAGAAGACAATTTCGTAGACTTGCACAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520110.5
CDS CAA 72 bp ATACTCTCAGGTCTCTGTAGGTTCCTTTTGCTTCCGTaGCAGCTGTGCAAGTCTACGAAATTGTCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: ILSGLCRFLLLP*QLCKSTKLSSG
Trigger: CCCAGAAGACAATTTCGTAGACTTGCACAGCTGCAACGGAAGCAAAAGGAACCTACAGAGACCTGAGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520110.5
CDS GCA 72 bp CTCTCAGAATACTCTCAGGTCTCTGTAGGTTCCTTTTaGTTCCGTTGCAGCTGTGCAAGTCTACGAAATTGT +
Preference number: 6 (lower is better)
Translates to: LSEYSQVSVGSF*FRCSCASLRNC
Trigger: ACAATTTCGTAGACTTGCACAGCTGCAACGGAAGCAAAAGGAACCTACAGAGACCTGAGAGTATTCTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520110.5
CDS CAA 72 bp ATCGATGTCTTTCCCCTGCTCGTGGGCTTCAATCAGTaGTTTAATAACATCTCCTATAGTCAGCATCATCAG +
Preference number: 6 (lower is better)
Translates to: IDVFPLLVGFNQ*FNNISYSQHHQ
Trigger: CTGATGATGCTGACTATAGGAGATGTTATTAAACAACTGATTGAAGCCCACGAGCAGGGGAAAGACATCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000256398.13
ENST00000380353.8
ENST00000518112.5
ENST00000520270.5
ENST00000520288.5
ENST00000521015.5
ENST00000521099.1
ENST00000521570.5
ENST00000521938.5
ENST00000523687.5
ENST00000523760.5
CDS GCA 72 bp TTGGTTTTCACCTTATTTAGATCGATGTCTTTCCCCTaGTCGTGGGCTTCAATCAGTTGTTTAATAACATCT +
Preference number: 6 (lower is better)
Translates to: LVFTLFRSMSFP*SWASISCLITS
Trigger: AGATGTTATTAAACAACTGATTGAAGCCCACGAGCAGGGGAAAGACATCGATCTAAATAAGGTGAAAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256398.13
ENST00000520270.5
ENST00000520288.5
ENST00000521015.5
ENST00000521099.1
ENST00000521570.5
ENST00000521938.5
ENST00000523760.5