RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000134759

Ensembl transcript IDs: ENST00000350494.10, ENST00000351393.10, ENST00000358232.11, ENST00000423854.6, ENST00000442325.6, ENST00000535093.1, ENST00000535488.5, ENST00000536373.5, ENST00000536830.1, ENST00000539560.5, ENST00000540135.5, ENST00000540730.5, ENST00000540766.5, ENST00000540799.1, ENST00000541190.5, ENST00000541294.1, ENST00000541748.5, ENST00000542050.5, ENST00000542430.5, ENST00000542824.5, ENST00000543127.5, ENST00000543439.5, ENST00000543861.5, ENST00000544267.5, ENST00000545302.5, ENST00000545632.5

Found 556 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCACCACGCCCGGCCCGGGTCCCAGATCTCTGAGTCCACCAGAGTaGGGCTCAGAGTCCTCTATCCACCAACCACATGCAGCCATCCAA +
Preference number: 1 (lower is better)
Translates to: ATTPGPGPRSLSPPE*GSESSIHQPHAAIQ
Trigger: TTGGATGGCTGCATGTGGTTGGTGGATAGAGGACTCTGAGCCCCACTCTGGTGGACTCAGAGATCTGGGACCCGGGCCGGGCGTGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR TCA 90 bp CTGCAACCACGTATCGTTGAGAAGGGTGGAGCACTGGGCAGACGCTaGCAGCTGTCACAGCCCCACCCACGTCCAGGACTGAGGAGCAGG +
Preference number: 1 (lower is better)
Translates to: LQPRIVEKGGALGRR*QLSQPHPRPGLRSR
Trigger: CCTGCTCCTCAGTCCTGGACGTGGGTGGGGCTGTGACAGCTGTCAGCGTCTGCCCAGTGCTCCACCCTTCTCAACGATACGTGGTTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540766.5
3UTR GCA 90 bp GTTAACCTCTCTCCACCCAGCACCCAGGCTCCCAACTCTCCTGGCTaGCTCCAGCCCTCAGCTGGCACCACTGACATGCTGTTTCCAGTA +
Preference number: 1 (lower is better)
Translates to: VNLSPPSTQAPNSPG*LQPSAGTTDMLFPV
Trigger: TACTGGAAACAGCATGTCAGTGGTGCCAGCTGAGGGCTGGAGGCAGCCAGGAGAGTTGGGAGCCTGGGTGCTGGGTGGAGAGAGGTTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 90 bp GAGTCCACCAGAGTGGGGCTCAGAGTCCTCTATCCACCAACCACATaGAGCCATCCAACACGCTGTCTCTCTTCTGGCCTCAGCCTCATT +
Preference number: 1 (lower is better)
Translates to: ESTRVGLRVLYPPTT*SHPTRCLSSGLSLI
Trigger: AATGAGGCTGAGGCCAGAAGAGAGACAGCGTGTTGGATGGCTGCATGTGGTTGGTGGATAGAGGACTCTGAGCCCCACTCTGGTGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 90 bp AGTCAGGGGCAGGCCTTTCTTCATGCCTTCTTCCTCTTTGCTGGCTaGAACGCAAAGACCATGGCAGGAGGCCAAGCAGCCATCCTGGAA +
Preference number: 1 (lower is better)
Translates to: SQGQAFLHAFFLFAG*NAKTMAGGQAAILE
Trigger: TTCCAGGATGGCTGCTTGGCCTCCTGCCATGGTCTTTGCGTTCCAGCCAGCAAAGAGGAAGAAGGCATGAAGAAAGGCCTGCCCCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR TCA 90 bp CCTCATACTAAGGACGTCAGACAGCGAAATAAGAGCCTGGGTCCTTaGCCCTGTAGACATCTCCCTCCCCATCCTGGTCTGTCTGCCTTG +
Preference number: 1 (lower is better)
Translates to: PHTKDVRQRNKSLGP*PCRHLPPHPGLSAL
Trigger: CAAGGCAGACAGACCAGGATGGGGAGGGAGATGTCTACAGGGTCAAGGACCCAGGCTCTTATTTCGCTGTCTGACGTCCTTAGTATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 90 bp TTAAAGTCAGGGGCAGGCCTTTCTTCATGCCTTCTTCCTCTTTGCTaGCTGGAACGCAAAGACCATGGCAGGAGGCCAAGCAGCCATCCT +
Preference number: 1 (lower is better)
Translates to: LKSGAGLSSCLLPLC*LERKDHGRRPSSHP
Trigger: AGGATGGCTGCTTGGCCTCCTGCCATGGTCTTTGCGTTCCAGCCAGCAAAGAGGAAGAAGGCATGAAGAAAGGCCTGCCCCTGACTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 90 bp GGTGAAAGCCTCATACTAAGGACGTCAGACAGCGAAATAAGAGCCTaGGTCCTTGACCCTGTAGACATCTCCCTCCCCATCCTGGTCTGT +
Preference number: 1 (lower is better)
Translates to: GESLILRTSDSEIRA*VLDPVDISLPILVC
Trigger: ACAGACCAGGATGGGGAGGGAGATGTCTACAGGGTCAAGGACCCAGGCTCTTATTTCGCTGTCTGACGTCCTTAGTATGAGGCTTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 90 bp TTCTTCATGCCTTCTTCCTCTTTGCTGGCTGGAACGCAAAGACCATaGCAGGAGGCCAAGCAGCCATCCTGGAAGGTGAAAGCCTCATAC +
Preference number: 1 (lower is better)
Translates to: FFMPSSSLLAGTQRP*QEAKQPSWKVKASY
Trigger: GTATGAGGCTTTCACCTTCCAGGATGGCTGCTTGGCCTCCTGCCATGGTCTTTGCGTTCCAGCCAGCAAAGAGGAAGAAGGCATGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 90 bp GGAAGCCTGCATGCACTTGGGTCAGAACAAGCCCATGTGTCAATGTaGGTAAAGATTCCTCAGCTGATAAGCAGGAAAATGGGCAGGGCA +
Preference number: 1 (lower is better)
Translates to: GSLHALGSEQAHVSM*VKIPQLISRKMGRA
Trigger: TGCCCTGCCCATTTTCCTGCTTATCAGCTGAGGAATCTTTACCCACATTGACACATGGGCTTGTTCTGACCCAAGTGCATGCAGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 90 bp CACAGTGACAGCCAGTGTGAGCTGGGTTTCTGTTGCCCAACTCATTaGGGTTCCAACCCTCACCTAGACTGCCCTATGAAATACCTAGAA +
Preference number: 1 (lower is better)
Translates to: HSDSQCELGFCCPTH*GSNPHLDCPMKYLE
Trigger: TTCTAGGTATTTCATAGGGCAGTCTAGGTGAGGGTTGGAACCCCAATGAGTTGGGCAACAGAAACCCAGCTCACACTGGCTGTCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 90 bp TTCCAGAATGAAGCACCCCAGTTCTCTGCTGAGCACATGGGCATCTaGAATAAAGATTTAATTTCCCAGCTTCTCCTGAAGCTCGGTATG +
Preference number: 1 (lower is better)
Translates to: FQNEAPQFSAEHMGI*NKDLISQLLLKLGM
Trigger: CATACCGAGCTTCAGGAGAAGCTGGGAAATTAAATCTTTATTGCAGATGCCCATGTGCTCAGCAGAGAACTGGGGTGCTTCATTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 90 bp GTAAAGATTCCTCAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTaGTCTTTGAGGTTCAAAGCTCAGATGCTCACTGCCTTGGTATAC +
Preference number: 1 (lower is better)
Translates to: VKIPQLISRKMGRAF*SLRFKAQMLTALVY
Trigger: GTATACCAAGGCAGTGAGCATCTGAGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTGAGGAATCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 90 bp CTTTCAACACATTTATTATATACAGCTGTCACTGCATTGTCAATCTaGCAAATGGCTCTATGTTCCAACAGGGCTGGAGTAGTCCCCTGC +
Preference number: 1 (lower is better)
Translates to: LSTHLLYTAVTALSI*QMALCSNRAGVVPC
Trigger: GCAGGGGACTACTCCAGCCCTGTTGGAACATAGAGCCATTTGGCAGATTGACAATGCAGTGACAGCTGTATATAATAAATGTGTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 90 bp CCTCACCTTCCTCCTTTCAACACATTTATTATATACAGCTGTCACTaGATTGTCAATCTGCCAAATGGCTCTATGTTCCAACAGGGCTGG +
Preference number: 1 (lower is better)
Translates to: PHLPPFNTFIIYSCH*IVNLPNGSMFQQGW
Trigger: CCAGCCCTGTTGGAACATAGAGCCATTTGGCAGATTGACAATGCAGTGACAGCTGTATATAATAAATGTGTTGAAAGGAGGAAGGTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 90 bp AAGAATAAAAGAAATGACTGGCTGCAGCTCAAACCTACAACTGCTTaGGAAACTCTACAATGTCTGGCAGATGCTAGAAAGAAGGGGATC +
Preference number: 1 (lower is better)
Translates to: KNKRNDWLQLKPTTA*ETLQCLADARKKGI
Trigger: GATCCCCTTCTTTCTAGCATCTGCCAGACATTGTAGAGTTTCGCAAGCAGTTGTAGGTTTGAGCTGCAGCCAGTCATTTCTTTTATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 90 bp TGCCGTGAGTATGGGCATACAAAAACTACCACTAATATTTTACAGTaGTTGCTTCATATCTGTCCATGTGTCCGTCACTCCACCCATCAT +
Preference number: 1 (lower is better)
Translates to: CREYGHTKTTTNILQ*LLHICPCVRHSTHH
Trigger: ATGATGGGTGGAGTGACGGACACATGGACAGATATGAAGCAAGCACTGTAAAATATTAGTGGTAGTTTTTGTATGCCCATACTCACGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR TCA 90 bp CCCACTAGCAGCAACAGCTTTGTGTTAGCTTGGCTCCAATTTGAATaGAATATTCCAAGGCCATTTTCCCCAACACGTTGTTACCAAAAA +
Preference number: 1 (lower is better)
Translates to: PTSSNSFVLAWLQFE*NIPRPFSPTRCYQK
Trigger: TTTTTGGTAACAACGTGTTGGGGAAAATGGCCTTGGAATATTTCATTCAAATTGGAGCCAAGCTAACACAAAGCTGTTGCTGCTAGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 90 bp GTGAGTATGGGCATACAAAAACTACCACTAATATTTTACAGTGCTTaGTTCATATCTGTCCATGTGTCCGTCACTCCACCCATCATATTT +
Preference number: 1 (lower is better)
Translates to: VSMGIQKLPLIFYSA*FISVHVSVTPPIIF
Trigger: AAATATGATGGGTGGAGTGACGGACACATGGACAGATATGAAGCAAGCACTGTAAAATATTAGTGGTAGTTTTTGTATGCCCATACTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR TCA 90 bp AAGGAGTTTCTACCATTAACATTTTATTTAAAGGCTTTGGGACTCTaGAGTATAATGTTTGTGAAATGCTATGAGCCAGACCCTCCACAC +
Preference number: 1 (lower is better)
Translates to: KEFLPLTFYLKALGL*SIMFVKCYEPDPPH
Trigger: GTGTGGAGGGTCTGGCTCATAGCATTTCACAAACATTATACTTCAGAGTCCCAAAGCCTTTAAATAAAATGTTAATGGTAGAAACTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 90 bp ATACTTCACATAAATGGAAGCATAGAGTATTTGTCTTCCAGTGACTaGCTTACTTCACTTAGCATCATGTCCTCAAGATTCATCCATGTT +
Preference number: 1 (lower is better)
Translates to: ILHINGSIEYLSSSD*LTSLSIMSSRFIHV
Trigger: AACATGGATGAATCTTGAGGACATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCCATTTATGTGAAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR GCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGGGCTGCGTCACGGACTaGCACTTTTGCCATCCTGCT +
Preference number: 2 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQGCVTD*HFCHPA
Trigger: AGCAGGATGGCAAAAGTGGCAGTCCGTGACGCAGCC...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR GCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGTTCAAGCGGTTCTCCTaGCTCAGCCTCTGGAACATC +
Preference number: 2 (lower is better)
Translates to: STPVGASRTQHGLSPSLWFKRFS*LSLWNI
Trigger: GATGTTCCAGAGGCTGAGGCAGGAGAACCGCTTGAA...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGACTAAGTTAGGCCTCTaGATCTGCTCTGGAAGCCTG +
Preference number: 2 (lower is better)
Translates to: STPVGASRTQHGLSPSLWTKLGL*ICSGSL
Trigger: CAGGCTTCCAGAGCAGATTCAGAGGCCTAACTTAGT...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR GCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGTATCCACCAACCACATaGAGCCATCCAACACGCTGT +
Preference number: 2 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQYPPTT*SHPTRC
Trigger: ACAGCGTGTTGGATGGCTGCATGTGGTTGGTGGATA...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGAAGCCTGCATGCACTTaGGTCAGAACAAGCCCATGT +
Preference number: 2 (lower is better)
Translates to: STPVGASRTQHGLSPSLWKPACT*VRTSPC
Trigger: ACATGGGCTTGTTCTGACCCAAGTGCATGCAGGCTT...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGTCCTCCCCCAGTCCTTaGCAACTACCATTCTACTTG +
Preference number: 2 (lower is better)
Translates to: STPVGASRTQHGLSPSLWSSPSP*QLPFYL
Trigger: CAAGTAGAATGGTAGTTGCCAAGGACTGGGGGAGGA...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 90 bp GTTTTTAAAGTCAGGGGCAGGCCTTTCTTCATGCCTTCTTCCTCTTaGCTGGCTGGAACGCAAAGACCATGGCAGGAGGCCAAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: VFKVRGRPFFMPSSS*LAGTQRPWQEAKQP
Trigger: TGGCTGCTTGGCCTCCTGCCATGGTCTTTGCGTTCCAGCCAGCAAAGAGGAAGAAGGCATGAAGAAAGGCCTGCCCCTGACTTTAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGGGGCAAATCCAGTCATaGAGAAAGAACAGAGGTTCT +
Preference number: 2 (lower is better)
Translates to: STPVGASRTQHGLSPSLWGQIQS*RKNRGS
Trigger: AGAACCTCTGTTCTTTCTTCATGACTGGATTTGCCC...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGAGCTTGGCTCCAATTTaGATGAAATATTCCAAGGCC +
Preference number: 2 (lower is better)
Translates to: STPVGASRTQHGLSPSLWSLAPI*MKYSKA
Trigger: GGCCTTGGAATATTTCATTCAAATTGGAGCCAAGCT...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp TCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTGCAACCACGTATCGTTaGGAAGGGTGGAGCACTGGG +
Preference number: 2 (lower is better)
Translates to: SSPQLAKCNHSAPSASFCATTYR*EGWSTG
Trigger: CCCAGTGCTCCACCCTTCTCAACGATACGTGGTTGC...ACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
3UTR-3UTR GCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTCCCAACTCTCCTGGCTaGCTCCAGCCCTCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSPNSPG*LQPSAG
Trigger: GCCAGCTGAGGGCTGGAGGCAGCCAGGAGAGTTGGG...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp CACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGGGGAGGTGGAGGTTGTaGCAAAGCAAGACTCCATCT +
Preference number: 2 (lower is better)
Translates to: HHSLQSVTTQHLLLPSVQGRWRL*QSKTPS
Trigger: AGATGGAGTCTTGCTTTGTCACAACCTCCACCTCCC...CTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540766.5
3UTR-3UTR TCA 90 bp CAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTACCCACGTCCAGGACTaGGGAGCAGGGGCCAATGTT +
Preference number: 2 (lower is better)
Translates to: QLAKCNHSAPSASFCSVFTHVQD*GAGANV
Trigger: AACATTGGCCCCTGCTCCTCAGTCCTGGACGTGGGT...AAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540766.5
3UTR-3UTR GCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGTACACACACAACACGTaGGTCACTACAGAAAACTTT +
Preference number: 2 (lower is better)
Translates to: STPVGASRTQHGLSPSLWYTHNT*VTTENF
Trigger: AAAGTTTTCTGTAGTGACGCACGTGTTGTGTGTGTA...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR GCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGATAATGTTTGTGAAATaGTATGAGCCAGACCCTCCA +
Preference number: 2 (lower is better)
Translates to: STPVGASRTQHGLSPSLWIMFVK*YEPDPP
Trigger: TGGAGGGTCTGGCTCATAGCATTTCACAAACATTAT...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGGTTCATACATTGCACTaGATTCACACGTCTCAAGTA +
Preference number: 2 (lower is better)
Translates to: STPVGASRTQHGLSPSLWVHTLH*IHTSQV
Trigger: TACTTGAGACGTGTGAATCCAGTGCAATGTATGAAC...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp CAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTGCAACCACGTATCGTTaGGAAGGGTGGAGCACTGGG +
Preference number: 2 (lower is better)
Translates to: QLAKCNHSAPSASFCSVFATTYR*EGWSTG
Trigger: CCCAGTGCTCCACCCTTCTCAACGATACGTGGTTGC...AAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
3UTR-3UTR TCA 90 bp GTTGTGCTCAATACAGTCATCAGTGGAGTCGCACTCACCCCAGACAACCACCTTTGTCTCGACTCCCAGTaGAGAAATACTTGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: VVLNTVISGVALTPDNHLCLDSQ*RNTCCQ
Trigger: CTGACAGCAAGTATTTCTTCACTGGGAGTCGAGACA...AAGGTGGTTGTCTGGGGTGAGTGCGACTCCACTGATGACTGTATTGAGCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540766.5
3UTR-3UTR GCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAACTCAGAGCAGGGCCATaGCTAACCCGTATCTGGGGA +
Preference number: 2 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQLRAGP*LTRIWG
Trigger: TCCCCAGATACGGGTTAGGCATGGCCCTGCTCTGAG...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 90 bp TCATACACTAATCTCATCTCCACTTTTAGAGATGAGGGGAACAGCTaGCCCACAGTGACAGCCAGTGTGAGCTGGGTTTCTGTTGCCCAA +
Preference number: 2 (lower is better)
Translates to: SYTNLISTFRDEGNS*PTVTASVSWVSVAQ
Trigger: TTGGGCAACAGAAACCCAGCTCACACTGGCTGTCACTGTGGGCAAGCTGTTCCCCTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR GCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTCCACTTTTGCCATCCTaGTCAGAGCAGGGCCATGCC +
Preference number: 2 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSPLLPS*SEQGHA
Trigger: GGCATGGCCCTGCTCTGAGCAGGATGGCAAAAGTGG...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR GCA 90 bp GTTGTGCTCAATACAGTCATCAGTGGAGTCGCACTCACCCCAGACAACCACCTTACACTCCAATCCTACTaGAACCACGTATCGTTGAGA +
Preference number: 2 (lower is better)
Translates to: VVLNTVISGVALTPDNHLTLQSY*NHVSLR
Trigger: TCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGT...AAGGTGGTTGTCTGGGGTGAGTGCGACTCCACTGATGACTGTATTGAGCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540766.5
3UTR CAA 90 bp ATTCCTCAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTaGAGGTTCAAAGCTCAGATGCTCACTGCCTTGGTATACACGCAC +
Preference number: 2 (lower is better)
Translates to: IPQLISRKMGRAFWS*RFKAQMLTALVYTH
Trigger: GTGCGTGTATACCAAGGCAGTGAGCATCTGAGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTGAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTAGAAAGAGAATCGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: QLISRKMGRAFWSLRFKARKRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCGATTCTCTTTCT...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR GCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGGCTGGAGTAGTCCCCTaGTCACACCAGCCTTCACAA +
Preference number: 2 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMAGVVP*SHQPSQ
Trigger: TTGTGAAGGCTGGTGTGAGCAGGGGACTACTCCAGC...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGCCGCCTGGCCAACGGTaGAACCCAGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEPPGQR*NPVSTK
Trigger: TTTAGTAGAGACTGGGTTTCACCGTTGGCCAGGCGG...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR GCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTGCTCTCCCGTCTCCCTaGCTGTTAATCCTAGAAGTG +
Preference number: 2 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSALPSP*LLILEV
Trigger: CACTTCTAGGATTAACAGGCAGGGAGACGGGAGAGC...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGATTAGCCGGAATTGGTaGTGTGCCTCTAGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMISRNW*CASSPS
Trigger: GCTGGGACTAGAGGCACACCACCAATTCCGGCTAAT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 90 bp CCCCAGACAACCACCTTTTTGTCTCGACTCCCAGTGAAGAAATACTaGCTGTCAGGACTCCAATCACAAGACCAAATAATTCTACTGTGC +
Preference number: 2 (lower is better)
Translates to: PQTTTFLSRLPVKKY*LSGLQSQDQIILLC
Trigger: GCACAGTAGAATTATTTGGTCTTGTGATTGGAGTCCTGACAGCAAGTATTTCTTCACTGGGAGTCGAGACAAAAAGGTGGTTGTCTGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540766.5
3UTR-3UTR GCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTAGCTCAGATGCTCACTaGCTTGGTATACACGCACAC +
Preference number: 2 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSSSDAH*LGIHAH
Trigger: GTGTGCGTGTATACCAAGGCAGTGAGCATCTGAGCT...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAGCCCATGTGTCAATGTaGGTAAAGATTCCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQAHVSM*VKIPQL
Trigger: CAGCTGAGGAATCTTTACCCACATTGACACATGGGC...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTCCCAAACCTCTACCCTaGCCCTCCTTCTGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: CFLNIIKYPARVQICFVPPKPLP*PSFCCG
Trigger: GCCACAGCAGAAGGAGGGCCAGGGTAGAGGTTTGGG...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CCA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACAGAGCACACTTGGCGTaGTATGCTATCTATAGAAAA +
Preference number: 2 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNRAHLA*YAIYRK
Trigger: TTTTCTATAGATAGCATACCACGCCAAGTGTGCTCT...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTAAGACAGAGCACACTTaGCGTGGTATGCTATCTATA +
Preference number: 2 (lower is better)
Translates to: QLISRKMGRAFWSLRFKAKTEHT*RGMLSI
Trigger: TATAGATAGCATACCACGCCAAGTGTGCTCTGTCTT...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGACAGAAAACTTTTCCTaGCAGACAGGAAAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMTENFS*QTGKGP
Trigger: TGGGCCCTTTCCTGTCTGCCAGGAAAAGTTTTCTGT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 90 bp ATTGGCTCATTTAATTCTCAGAACAATCCTACACACTGGTTACTGTaGTTCTCCCTTTCTTCCAGAATGAAGCACCCCAGTTCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: IGSFNSQNNPTHWLL*FSLSSRMKHPSSLL
Trigger: CAGCAGAGAACTGGGGTGCTTCATTCTGGAAGAAAGGGAGAACAACAGTAACCAGTGTGTAGGATTGTTCTGAGAATTAAATGAGCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAATATCCCTCATCTCGTaGCTTCAGCTGTCACATAAA +
Preference number: 2 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQISLIS*LQLSHK
Trigger: TTTATGTGACAGCTGAAGTCACGAGATGAGGGATAT...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGAAATATGGATGGCCATaGGCCACATGTGGCTATGAA +
Preference number: 2 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMKYGWP*ATCGYE
Trigger: TTCATAGCCACATGTGGCTCATGGCCATCCATATTT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp GCCCATTCCACTCCTCTAATCCAATCCTCATGTCCACAGAGAGAAAGCACTTTCACTGCTTTTAAAAGCTaGTTATCCTCTATTTCCCAG +
Preference number: 2 (lower is better)
Translates to: AHSTPLIQSSCPQRESTFTAFKS*LSSISQ
Trigger: CTGGGAAATAGAGGATAATCAGCTTTTAAAAGCAGT...GAAAGTGCTTTCTCTCTGTGGACATGAGGATTGGATTAGAGGAGTGGAATGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545632.5
3UTR-3UTR TCA 90 bp AATATTGGTACTTCTGGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCAGGTCCTTCATGGCCTTaGAGATGCACTGCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: NIGTSGPFLDQSRTAESAGPSWP*RCTAFK
Trigger: TTTAAAAGCAGTGCATCTTCAAGGCCATGAAGGACC...TGCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGAAGTACCAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545632.5
3UTR-3UTR GCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAGCTCAAACCTACAACTaGTTGCGAAACTCTACAATG +
Preference number: 2 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQAQTYN*LRNSTM
Trigger: CATTGTAGAGTTTCGCAAGCAGTTGTAGGTTTGAGC...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR GCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAACTGCATTGTCAATCTaGCAAATGGCTCTATGTTCC +
Preference number: 2 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQTALSI*QMALCS
Trigger: GGAACATAGAGCCATTTGGCAGATTGACAATGCAGT...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR GCA 90 bp CACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGGTTCAGTTTTTCCACTaGAATTCTTCCAGCATAATT +
Preference number: 2 (lower is better)
Translates to: HHSLQSVTTQHLLLPSVQVQFFH*NSSSII
Trigger: AATTATGCTGGAAGAATTGCAGTGGAAAAACTGAAC...CTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
3UTR-3UTR CCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGCATTTAGTAATAGCCTaGGGTAACAAGGGCTGCGTC +
Preference number: 2 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEHLVIA*GNKGCV
Trigger: GACGCAGCCCTTGTTACCCCAGGCTATTACTAAATG...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 90 bp ACCTTCCTCCTTTCAACACATTTATTATATACAGCTGTCACTGCATaGTCAATCTGCCAAATGGCTCTATGTTCCAACAGGGCTGGAGTA +
Preference number: 2 (lower is better)
Translates to: TFLLSTHLLYTAVTA*SICQMALCSNRAGV
Trigger: TACTCCAGCCCTGTTGGAACATAGAGCCATTTGGCAGATTGACAATGCAGTGACAGCTGTATATAATAAATGTGTTGAAAGGAGGAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTGGGAGGTGGAGGTTGTaGCAAAGCAAGACTCCATCT +
Preference number: 2 (lower is better)
Translates to: CFLNIIKYPARVQICFVPGRWRL*QSKTPS
Trigger: AGATGGAGTCTTGCTTTGTCACAACCTCCACCTCCC...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp GAATCTGCAGCTGCAGAAACGATCAGTGTACATAATGCAGGATCTGATGTCCTCACTGCTTTTAAAAGCTaGTTATCCTCTATTTCCCAG +
Preference number: 2 (lower is better)
Translates to: ESAAAETISVHNAGSDVLTAFKS*LSSISQ
Trigger: CTGGGAAATAGAGGATAATCAGCTTTTAAAAGCAGT...GAGGACATCAGATCCTGCATTATGTACACTGATCGTTTCTGCAGCTGCAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
3UTR-3UTR GCA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACATCTCTGAACATATGTaGAAAATTCTGGGTATGTGT +
Preference number: 2 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNISEHM*KILGMC
Trigger: ACACATACCCAGAATTTTGCACATATGTTCAGAGAT...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CCA 90 bp AAACGATCAGTGTACATAATGCAGGATCTGATGTCCTCCTCTGGTAAACAGCATAAGGCACATTACTTCTaGACCCTTTTTAGACCAGAG +
Preference number: 2 (lower is better)
Translates to: KRSVYIMQDLMSSSGKQHKAHYF*TLFRPE
Trigger: CTCTGGTCTAAAAAGGGTCCAGAAGTAATGTGCCTT...ATGCTGTTTACCAGAGGAGGACATCAGATCCTGCATTATGTACACTGATCGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544267.5
3UTR CAA 90 bp CGTGAGTATGGGCATACAAAAACTACCACTAATATTTTACAGTGCTaGCTTCATATCTGTCCATGTGTCCGTCACTCCACCCATCATATT +
Preference number: 2 (lower is better)
Translates to: REYGHTKTTTNILQC*LHICPCVRHSTHHI
Trigger: AATATGATGGGTGGAGTGACGGACACATGGACAGATATGAAGCAAGCACTGTAAAATATTAGTGGTAGTTTTTGTATGCCCATACTCACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTTTTAGAGTGTACAGTTaGGTTGGCATACAGCATTCA +
Preference number: 2 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSFRVYS*VGIQHS
Trigger: TGAATGCTGTATGCCAACTCAACTGTACACTCTAAA...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTGAAAGAATTGTACAGTaGACACCCCTTAAGGAGTTT +
Preference number: 2 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSERIVQ*TPLKEF
Trigger: AAACTCCTTAAGGGGTGTTCACTGTACAATTCTTTC...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAAATAAAAGAAATGACTaGCTGCAGCTCAAACCTACA +
Preference number: 2 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQNKRND*LQLKPT
Trigger: TGTAGGTTTGAGCTGCAGCCAGTCATTTCTTTTATT...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTAGGTCTAGGAATCTCTaGACATATGTGCAAAATTCT +
Preference number: 2 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSRSRNL*TYVQNS
Trigger: AGAATTTTGCACATATGTTCAGAGATTCCTAGACCT...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTCAGAGGTTCTTAAATTaGGACACACAGAGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: CFLNIIKYPARVQICFVPQRFLN*DTQRQV
Trigger: GACCTGCCTCTGTGTGTCCCAATTTAAGAACCTCTG...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGACAATTTGGGAAAACTaGCAACTTGAAAACTCAGTC +
Preference number: 2 (lower is better)
Translates to: VEWKPDSYTNLISTFRDETIWEN*QLENSV
Trigger: GACTGAGTTTTCAAGTTGTCAGTTTTCCCAAATTGT...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR GCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGATATACAGCTGTCACTaGATTGTCAATCTGCCAAAT +
Preference number: 2 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEIYSCH*IVNLPN
Trigger: ATTTGGCAGATTGACAATGCAGTGACAGCTGTATAT...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR GCA 90 bp TTCTGCAATCATCATTGCCACATGCTAATATTGGTACATCAGTATTTGGCAAAAAGCAGAATCTGCAGCTaGAGAAACGATCAGTGTACA +
Preference number: 2 (lower is better)
Translates to: FCNHHCHMLILVHQYLAKSRICS*RNDQCT
Trigger: TGTACACTGATCGTTTCTGCAGCTGCAGATTCTGCT...TTTTGCCAAATACTGATGTACCAATATTAGCATGTGGCAATGATGATTGCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544267.5
3UTR-3UTR CCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTTTACATCCTGGGAAATaGTGTTTACCATGCTTTAAA +
Preference number: 2 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSLHPGK*CLPCFK
Trigger: TTTAAAGCATGGTAAACACCATTTCCCAGGATGTAA...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTCTTCCTTTTAGAGGCTaGATAATATTCCACTGTATG +
Preference number: 2 (lower is better)
Translates to: CFLNIIKYPARVQICFVPLPFRG*IIFHCM
Trigger: CATACAGTGGAATATTATTCAGCCTCTAAAAGGAAG...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR TCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTTGGCTCCAATTTGAATaGAATATTCCAAGGCCATTT +
Preference number: 2 (lower is better)
Translates to: CFLNIIKYPARVQICFVPWLQFE*NIPRPF
Trigger: AAATGGCCTTGGAATATTTCATTCAAATTGGAGCCA...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR TCA 72 bp CATGAGCCACCACGCCCGGCCCGGGTCCCAGATCTCTaGGTCCACCAGAGTGGGGCTCAGAGTCCTCTATCC +
Preference number: 3 (lower is better)
Translates to: HEPPRPARVPDL*VHQSGAQSPLS
Trigger: GGATAGAGGACTCTGAGCCCCACTCTGGTGGACTCAGAGATCTGGGACCCGGGCCGGGCGTGGTGGCTCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR TCA 72 bp CGTATCGTTGAGAAGGGTGGAGCACTGGGCAGACGCTaGCAGCTGTCACAGCCCCACCCACGTCCAGGACTG +
Preference number: 3 (lower is better)
Translates to: RIVEKGGALGRR*QLSQPHPRPGL
Trigger: CAGTCCTGGACGTGGGTGGGGCTGTGACAGCTGTCAGCGTCTGCCCAGTGCTCCACCCTTCTCAACGATACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540766.5
3UTR GCA 72 bp GTCGGGAGACAGTCTGGGGACAGTCAGCAGGCACCTTaGTGCAGGAGAGCCCCTGCAAGAGCAGCCTTTGTG +
Preference number: 3 (lower is better)
Translates to: VGRQSGDSQQAP*CRRAPARAAFV
Trigger: CACAAAGGCTGCTCTTGCAGGGGCTCTCCTGCAGCAAGGTGCCTGCTGACTGTCCCCAGACTGTCTCCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 72 bp CCCGGCCCGGGTCCCAGATCTCTGAGTCCACCAGAGTaGGGCTCAGAGTCCTCTATCCACCAACCACATGCA +
Preference number: 3 (lower is better)
Translates to: PGPGPRSLSPPE*GSESSIHQPHA
Trigger: TGCATGTGGTTGGTGGATAGAGGACTCTGAGCCCCACTCTGGTGGACTCAGAGATCTGGGACCCGGGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 72 bp CCCAACTGTACCCAGAGCTGGGCTCTCCCGTCTCCCTaGCTGTTAATCCTAGAAGTGGGTGCCGAGGAGGGA +
Preference number: 3 (lower is better)
Translates to: PNCTQSWALPSP*LLILEVGAEEG
Trigger: TCCCTCCTCGGCACCCACTTCTAGGATTAACAGGCAGGGAGACGGGAGAGCCCAGCTCTGGGTACAGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGGAAGCCTGCATGCACTaGGGTCAGAACAAGCCCATG +
Preference number: 3 (lower is better)
Translates to: STPVGASRTQHGLSPSLWEACMH*GQNKPM
Trigger: CATGGGCTTGTTCTGACCCAAGTGCATGCAGGCTTC...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR TCA 72 bp AAGGACGTCAGACAGCGAAATAAGAGCCTGGGTCCTTaGCCCTGTAGACATCTCCCTCCCCATCCTGGTCTG +
Preference number: 3 (lower is better)
Translates to: KDVRQRNKSLGP*PCRHLPPHPGL
Trigger: CAGACCAGGATGGGGAGGGAGATGTCTACAGGGTCAAGGACCCAGGCTCTTATTTCGCTGTCTGACGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 72 bp CCTTCTTCCTCTTTGCTGGCTGGAACGCAAAGACCATaGCAGGAGGCCAAGCAGCCATCCTGGAAGGTGAAA +
Preference number: 3 (lower is better)
Translates to: PSSSLLAGTQRP*QEAKQPSWKVK
Trigger: TTTCACCTTCCAGGATGGCTGCTTGGCCTCCTGCCATGGTCTTTGCGTTCCAGCCAGCAAAGAGGAAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 72 bp CACCACCATTTAGTAATAGCCTGGGGTAACAAGGGCTaGGTCACGGACTGCCACTTTTGCCATCCTGCTCAG +
Preference number: 3 (lower is better)
Translates to: HHHLVIAWGNKG*VTDCHFCHPAQ
Trigger: CTGAGCAGGATGGCAAAAGTGGCAGTCCGTGACGCAGCCCTTGTTACCCCAGGCTATTACTAAATGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTCCTGAGACGAGGAGTTaGAGACCCGCCTGGCCAACG +
Preference number: 3 (lower is better)
Translates to: QLISRKMGRAFWSLRFKAPETRS*RPAWPT
Trigger: CGTTGGCCAGGCGGGTCTCAAACTCCTCGTCTCAGG...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGCAAGATTCATCCATGTaGCAGCACATGTCAGCGTAT +
Preference number: 3 (lower is better)
Translates to: STPVGASRTQHGLSPSLWQDSSM*QHMSAY
Trigger: ATACGCTGACATGTGCTGCAACATGGATGAATCTTG...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 72 bp ACTGCCACTTTTGCCATCCTGCTCAGAGCAGGGCCATaGCTAACCCGTATCTGGGGATTGCTTCAGATATTA +
Preference number: 3 (lower is better)
Translates to: TATFAILLRAGP*LTRIWGLLQIL
Trigger: TAATATCTGAAGCAATCCCCAGATACGGGTTAGGCATGGCCCTGCTCTGAGCAGGATGGCAAAAGTGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 72 bp AGGCCTCTGAATCTGCTCTGGAAGCCTGCATGCACTTaGGTCAGAACAAGCCCATGTGTCAATGTGGGTAAA +
Preference number: 3 (lower is better)
Translates to: RPLNLLWKPACT*VRTSPCVNVGK
Trigger: TTTACCCACATTGACACATGGGCTTGTTCTGACCCAAGTGCATGCAGGCTTCCAGAGCAGATTCAGAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGCAGCATGCAGAAAAGTaGAAAGAATTGTACAGTGAA +
Preference number: 3 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQQHAEK*KELYSE
Trigger: TTCACTGTACAATTCTTTCAACTTTTCTGCATGCTG...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp CACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTGCAACCACGTATCGTaGAGAAGGGTGGAGCACTGG +
Preference number: 3 (lower is better)
Translates to: HSLQSVTTQHLLLPSVQFCNHVS*RRVEHW
Trigger: CCAGTGCTCCACCCTTCTCAACGATACGTGGTTGCA...AAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
3UTR CCA 72 bp CCTCAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTaGTCTTTGAGGTTCAAAGCTCAGATGCTCACTGCC +
Preference number: 3 (lower is better)
Translates to: PQLISRKMGRAF*SLRFKAQMLTA
Trigger: GGCAGTGAGCATCTGAGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTCACGGACTGCCACTTTaGCCATCCTGCTCAGAGCAG +
Preference number: 3 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSHGLPL*PSCSEQ
Trigger: CTGCTCTGAGCAGGATGGCAAAAGTGGCAGTCCGTG...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTGTTGGGGAGGGCAGCTaGTTACATGGACATCAGGGC +
Preference number: 3 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSVGEGS*LHGHQG
Trigger: GCCCTGATGTCCATGTAACAAGCTGCCCTCCCCAAC...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp CAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTTGCAACCACGTATCGTaGAGAAGGGTGGAGCACTGG +
Preference number: 3 (lower is better)
Translates to: QLAKCNHSAPSASFCSVFCNHVS*RRVEHW
Trigger: CCAGTGCTCCACCCTTCTCAACGATACGTGGTTGCA...AAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
3UTR-3UTR CAA 90 bp CACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGGACTTTGGCTTTGACTaGTTTCTACACAGTGGGTCC +
Preference number: 3 (lower is better)
Translates to: HHSLQSVTTQHLLLPSVQDFGFD*FLHSGS
Trigger: GGACCCACTGTGTAGAAACAAGTCAAAGCCAAAGTC...CTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
3UTR GCA 72 bp TGCCCAACTCATTGGGGTTCCAACCCTCACCTAGACTaGCCTATGAAATACCTAGAACTTGGTCAGGAGAAA +
Preference number: 3 (lower is better)
Translates to: CPTHWGSNPHLD*PMKYLELGQEK
Trigger: TTTCTCCTGACCAAGTTCTAGGTATTTCATAGGGCAGTCTAGGTGAGGGTTGGAACCCCAATGAGTTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 72 bp ACACACAACACGTGCGTCACTACAGAAAACTTTTCCTaGCAGACAGGAAAGGGCCCATTGTTGGTGATGTCA +
Preference number: 3 (lower is better)
Translates to: THNTCVTTENFS*QTGKGPLLVMS
Trigger: TGACATCACCAACAATGGGCCCTTTCCTGTCTGCCAGGAAAAGTTTTCTGTAGTGACGCACGTGTTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp GTAAACAGCATGCACCGCATAAACAGGTCCTTCATGGCCTTGAAGATGCACTGCTTCCCAGTGAATCACTaGATTATCAGATCCTCCAGA +
Preference number: 3 (lower is better)
Translates to: VNSMHRINRSFMALKMHCFPVNH*IIRSSR
Trigger: TCTGGAGGATCTGATAATCAAGTGATTCACTGGGAA...GCAGTGCATCTTCAAGGCCATGAAGGACCTGTTTATGCGGTGCATGCTGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
3UTR TCA 72 bp TGGGAAGTGAAAGGTGATATAATTTCCCTATTCCACTaGGCAGGAAGAGGCTGCCTTTGCATCCCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: WEVKGDIISLFH*AGRGCLCIPLC
Trigger: ACACAGAGGGATGCAAAGGCAGCCTCTTCCTGCTCAGTGGAATAGGGAAATTATATCACCTTTCACTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 72 bp GAAGCACCCCAGTTCTCTGCTGAGCACATGGGCATCTaGAATAAAGATTTAATTTCCCAGCTTCTCCTGAAG +
Preference number: 3 (lower is better)
Translates to: EAPQFSAEHMGI*NKDLISQLLLK
Trigger: CTTCAGGAGAAGCTGGGAAATTAAATCTTTATTGCAGATGCCCATGTGCTCAGCAGAGAACTGGGGTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTAAGAAAGAGAATCGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSKKENR*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCGATTCTCTTTCTT...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGCAGATGCTCACTGCCTaGGTATACACGCACACACAC +
Preference number: 3 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEQMLTA*VYTHTH
Trigger: GTGTGTGTGCGTGTATACCAAGGCAGTGAGCATCTG...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp TCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTAGCCAGTGTATGACTTaGGCTTTGACTTGTTTCTAC +
Preference number: 3 (lower is better)
Translates to: SSPQLAKCNHSAPSASFCSQCMT*ALTCFY
Trigger: GTAGAAACAAGTCAAAGCCAAAGTCATACACTGGCT...ACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
3UTR TCA 72 bp GACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTaGACATATGTGCAAAATTCTGGGTATGTGTGCATA +
Preference number: 3 (lower is better)
Translates to: DTQRQVCRSRNL*TYVQNSGYVCI
Trigger: TATGCACACATACCCAGAATTTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 72 bp AGAAATGACTGGCTGCAGCTCAAACCTACAACTGCTTaGGAAACTCTACAATGTCTGGCAGATGCTAGAAAG +
Preference number: 3 (lower is better)
Translates to: RNDWLQLKPTTA*ETLQCLADARK
Trigger: CTTTCTAGCATCTGCCAGACATTGTAGAGTTTCGCAAGCAGTTGTAGGTTTGAGCTGCAGCCAGTCATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 72 bp TCTCCTGAAGCTCGGTATGGCCACAACACTAAATTCTaGCCGAGGAGATTAAGCAAAATAGTATGGGACTTC +
Preference number: 3 (lower is better)
Translates to: SPEARYGHNTKF*PRRLSKIVWDF
Trigger: GAAGTCCCATACTATTTTGCTTAATCTCCTCGGGCAGAATTTAGTGTTGTGGCCATACCGAGCTTCAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 72 bp TCAAACCTACAACTGCTTGCGAAACTCTACAATGTCTaGCAGATGCTAGAAAGAAGGGGATCAAGACAGAGC +
Preference number: 3 (lower is better)
Translates to: SNLQLLAKLYNV*QMLERRGSRQS
Trigger: GCTCTGTCTTGATCCCCTTCTTTCTAGCATCTGCCAGACATTGTAGAGTTTCGCAAGCAGTTGTAGGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp CACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTGCACAGAAGTAATTTaGTTGGTGAAGGCAAAAAGA +
Preference number: 3 (lower is better)
Translates to: HHSLQSVTTQHLLLPSVQCTEVI*LVKAKR
Trigger: TCTTTTTGCCTTCACCAACAAAATTACTTCTGTGCA...CTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540766.5
3UTR TCA 72 bp TGCATCCTCCCTGGGGGACATATATCCCTCATCTCGTaGCTTCAGCTGTCACATAAATTCAAATGTTTCAGA +
Preference number: 3 (lower is better)
Translates to: CILPGGHISLIS*LQLSHKFKCFR
Trigger: TCTGAAACATTTGAATTTATGTGACAGCTGAAGTCACGAGATGAGGGATATATGTCCCCCAGGGAGGATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGACAGAGGTTCTTAAATaGGGACACACAGAGGCAGGT +
Preference number: 3 (lower is better)
Translates to: VEWKPDSYTNLISTFRDETEVLK*GHTEAG
Trigger: ACCTGCCTCTGTGTGTCCCAATTTAAGAACCTCTGT...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAACAAACCTACAACTGCTaGCGAAACTCTACAATGTCT +
Preference number: 3 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQQTYNC*RNSTMS
Trigger: AGACATTGTAGAGTTTCGCAAGCAGTTGTAGGTTTG...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGGGAAGCATAGAGTATTaGTCTTCCAGTGACTGGCTT +
Preference number: 3 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEGSIEY*SSSDWL
Trigger: AAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp CAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACTGCTACAGTGCACATTTATaGACTCTGTGTATCTTCACA +
Preference number: 3 (lower is better)
Translates to: QSVTTQHLLLPSVQFFHCYSAHL*TLCIFT
Trigger: TGTGAAGATACACAGAGTCAATAAATGTGCACTGTA...GCAGTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
3UTR-3UTR CAA 90 bp GGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATCCAGTGAAGAAATACTaGCTGTCAGGACTCCAATCA +
Preference number: 3 (lower is better)
Translates to: GFDLFLHSGSSHLFLELDPVKKY*LSGLQS
Trigger: TGATTGGAGTCCTGACAGCAAGTATTTCTTCACTGG...ATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540766.5
3UTR-3UTR CAA 90 bp AAACGATCAGTGTACATAATGCAGGATCTGATGTCCTCCTCTGGTAAACAGCATTTCCCAGTGAATCACTaGATTATCAGATCCTCCAGA +
Preference number: 3 (lower is better)
Translates to: KRSVYIMQDLMSSSGKQHFPVNH*IIRSSR
Trigger: TCTGGAGGATCTGATAATCAAGTGATTCACTGGGAA...ATGCTGTTTACCAGAGGAGGACATCAGATCCTGCATTATGTACACTGATCGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
3UTR TCA 72 bp TTTGGGACTCTGAAGTATAATGTTTGTGAAATGCTATaGGCCAGACCCTCCACACTGAAAATTCCCAGTGTA +
Preference number: 3 (lower is better)
Translates to: FGTLKYNVCEML*ARPSTLKIPSV
Trigger: TACACTGGGAATTTTCAGTGTGGAGGGTCTGGCTCATAGCATTTCACAAACATTATACTTCAGAGTCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR TCA 72 bp AGCAACAGCTTTGTGTTAGCTTGGCTCCAATTTGAATaGAATATTCCAAGGCCATTTTCCCCAACACGTTGT +
Preference number: 3 (lower is better)
Translates to: SNSFVLAWLQFE*NIPRPFSPTRC
Trigger: ACAACGTGTTGGGGAAAATGGCCTTGGAATATTTCATTCAAATTGGAGCCAAGCTAACACAAAGCTGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 72 bp CATTTATTATATACAGCTGTCACTGCATTGTCAATCTaGCAAATGGCTCTATGTTCCAACAGGGCTGGAGTA +
Preference number: 3 (lower is better)
Translates to: HLLYTAVTALSI*QMALCSNRAGV
Trigger: TACTCCAGCCCTGTTGGAACATAGAGCCATTTGGCAGATTGACAATGCAGTGACAGCTGTATATAATAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGGAGTGTACAGTTGAGTaGGCATACAGCATTCACATA +
Preference number: 3 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEECTVE*AYSIHI
Trigger: TATGTGAATGCTGTATGCCAACTCAACTGTACACTC...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGAGCCAGAGTTCAAATTaGCTTTGTCCCTTAAGCACA +
Preference number: 3 (lower is better)
Translates to: VEWKPDSYTNLISTFRDESQSSN*LCPLST
Trigger: TGTGCTTAAGGGACAAAGCAAATTTGAACTCTGGCT...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTACAGCTGTCACTGCATaGTCAATCTGCCAAATGGCT +
Preference number: 3 (lower is better)
Translates to: CFLNIIKYPARVQICFVPTAVTA*SICQMA
Trigger: AGCCATTTGGCAGATTGACAATGCAGTGACAGCTGT...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR GCA 72 bp CCTCCTTTCAACACATTTATTATATACAGCTGTCACTaGATTGTCAATCTGCCAAATGGCTCTATGTTCCAA +
Preference number: 3 (lower is better)
Translates to: PPFNTFIIYSCH*IVNLPNGSMFQ
Trigger: TTGGAACATAGAGCCATTTGGCAGATTGACAATGCAGTGACAGCTGTATATAATAAATGTGTTGAAAGGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CCA 72 bp ATAAATGGAAGCATAGAGTATTTGTCTTCCAGTGACTaGCTTACTTCACTTAGCATCATGTCCTCAAGATTC +
Preference number: 3 (lower is better)
Translates to: INGSIEYLSSSD*LTSLSIMSSRF
Trigger: GAATCTTGAGGACATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCCATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp GAATTCTGCAATCATCATTGCCACATGCTAATATTGGTACATCAGTATTTGGCATGCCACATGCTAATATaGGTACATCAGTATTTGGCA +
Preference number: 3 (lower is better)
Translates to: EFCNHHCHMLILVHQYLACHMLI*VHQYLA
Trigger: TGCCAAATACTGATGTACCAATATTAGCATGTGGCA...TGCCAAATACTGATGTACCAATATTAGCATGTGGCAATGATGATTGCAGAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
3UTR-3UTR CAA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTCCTCTTGTAATGTATTaGTTGAAGAATCTAGGTCCC +
Preference number: 3 (lower is better)
Translates to: CFLNIIKYPARVQICFVPPLVMY*LKNLGP
Trigger: GGGACCTAGATTCTTCAACAAATACATTACAAGAGG...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR-3UTR CAA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTCTTGTAATGTATTTGTaGAAGAATCTAGGTCCCTCT +
Preference number: 3 (lower is better)
Translates to: CFLNIIKYPARVQICFVPLVMYL*KNLGPS
Trigger: AGAGGGACCTAGATTCTTCAACAAATACATTACAAG...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR TCA 72 bp AAGATTTACCATCTTAACCATTTTAGAGTGTACAGTTaGGTTGGCATACAGCATTCACATAACTTAACTGTG +
Preference number: 3 (lower is better)
Translates to: KIYHLNHFRVYS*VGIQHSHNLTV
Trigger: CACAGTTAAGTTATGTGAATGCTGTATGCCAACTCAACTGTACACTCTAAAATGGTTAAGATGGTAAATCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR TCA 72 bp CTACCATTAACATTTTATTTAAAGGCTTTGGGACTCTaGAGTATAATGTTTGTGAAATGCTATGAGCCAGAC +
Preference number: 3 (lower is better)
Translates to: LPLTFYLKALGL*SIMFVKCYEPD
Trigger: GTCTGGCTCATAGCATTTCACAAACATTATACTTCAGAGTCCCAAAGCCTTTAAATAAAATGTTAATGGTAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 72 bp GAGGCCGAGGCAAGCAGATCACCTGAGACGAGGAGTTaGAGACCCGCCTGGCCAACGGTGAAACCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: EAEASRSPETRS*RPAWPTVKPSL
Trigger: GAGACTGGGTTTCACCGTTGGCCAGGCGGGTCTCAAACTCCTCGTCTCAGGTGATCTGCTTGCCTCGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358232.11
ENST00000540766.5
CDS-3UTR CCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGCAAGAGCAGCCTTTGTaGAGCTGTCCCTTCCACCCC +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQQEQPL*SCPFHP
Trigger: GGGGTGGAAGGGACAGCTCCACAAAGGCTGCTCTTG...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp CTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACGCACTGGGCAGACGCTaGCAGCTGTCACAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LSTLQSYCNHVSLRRVEHALGRR*QLSQPH
Trigger: GTGGGGCTGTGACAGCTGTCAGCGTCTGCCCAGTGC...GTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR TCA 90 bp TACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACTGGGCAGACGCTGACAGCGCAACCACGTATCGTTaGGAAGGGTGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: YCNHVSLRRVEHWADADSATTYR*EGWSTG
Trigger: CCCAGTGCTCCACCCTTCTCAACGATACGTGGTTGC...GCTGTCAGCGTCTGCCCAGTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR GCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGGCTGGAGTAGTCCCCTaGTCACACCAGCCTTCACAA +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQAGVVP*SHQPSQ
Trigger: TTGTGAAGGCTGGTGTGAGCAGGGGACTACTCCAGC...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGTGGGGTAACAAGGGCTaGGTCACGGACTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQWGNKG*VTDCHF
Trigger: AAAGTGGCAGTCCGTGACGCAGCCCTTGTTACCCCA...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 72 bp GTCAGGGGCAGGCCTTTCTTCATGCCTTCTTCCTCTTaGCTGGCTGGAACGCAAAGACCATGGCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VRGRPFFMPSSS*LAGTQRPWQEA
Trigger: GGCCTCCTGCCATGGTCTTTGCGTTCCAGCCAGCAAAGAGGAAGAAGGCATGAAGAAAGGCCTGCCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TCTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCAGCACTGGGCAGACGCTaGCAGCTGTCACAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SFHTPILLQPRIVEKGGAALGRR*QLSQPH
Trigger: GTGGGGCTGTGACAGCTGTCAGCGTCTGCCCAGTGC...TGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR GCA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAACCCAACTCTCCTGGCTaGCTCCAGCCCTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKPNSPG*LQPSAG
Trigger: GCCAGCTGAGGGCTGGAGGCAGCCAGGAGAGTTGGG...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGTCTGCTCTGGAAGCCTaGATGCACTTGGGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQSALEA*MHLGQN
Trigger: GTTCTGACCCAAGTGCATGCAGGCTTCCAGAGCAGA...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGCACCATGTCGCCAACTaGTCAGCCGCACAAACAAGA +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQHHVAN*SAAQTR
Trigger: TCTTGTTTGTGCGGCTGACCAGTTGGCGACATGGTG...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGATGTTCCAACAGGGCTaGAGTAGTCCCCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: STPVGASRTQHGLSPSLWMFQQG*SSPLLT
Trigger: TGTGAGCAGGGGACTACTCCAGCCCTGTTGGAACAT...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 72 bp CCACCCACGTCCAGGACTGAGGAGCAGGGGCCAATGTaGTGCTCAATACAGTCATCAGTGGAGTCGCACTCA +
Preference number: 4 (lower is better)
Translates to: PPTSRTEEQGPM*CSIQSSVESHS
Trigger: TGAGTGCGACTCCACTGATGACTGTATTGAGCACAACATTGGCCCCTGCTCCTCAGTCCTGGACGTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR TCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGTTGACTCGGGCGGTGTaGCCATTCAAGTTGGTAACA +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQLTRAV*PFKLVT
Trigger: TGTTACCAACTTGAATGGTCACACCGCCCGAGTCAA...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGGTATTCTGCAGAAGATaGTCCTCAGTGGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQVFCRR*SSVGGS
Trigger: TGAGCCTCCCACTGAGGATCATCTTCTGCAGAATAC...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGACTAAGTTAGGCCTCTaGATCTGCTCTGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQTKLGL*ICSGSL
Trigger: CAGGCTTCCAGAGCAGATTCAGAGGCCTAACTTAGT...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGTGTTGCCCAACTCATTaGGGTTCCAACCCTCACCTA +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQCCPTH*GSNPHL
Trigger: TAGGTGAGGGTTGGAACCCCAATGAGTTGGGCAACA...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACTGGGCAGACGCTGACAGCGAACTTCTCATTAGGTaGGAAGGCCATCTGCGTGAC +
Preference number: 4 (lower is better)
Translates to: YCNHVSLRRVEHWADADSELLIR*EGHLRD
Trigger: GTCACGCAGATGGCCTTCTCACCTAATGAGAAGTTC...GCTGTCAGCGTCTGCCCAGTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp CACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGAGTCTCCAGCACGGGTaGCACCATGTCGCCAACTGG +
Preference number: 4 (lower is better)
Translates to: HHSLQSVTTQHLLLPSVQSLQHG*HHVANW
Trigger: CCAGTTGGCGACATGGTGGCACCCGTGCTGGAGACT...CTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAACAGCAGGCACCTTGCTaGAGGAGAGCCCCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKQQAPC*RRAPAR
Trigger: TCTTGCAGGGGCTCTCCTGCAGCAAGGTGCCTGCTG...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAACCCAAACCTCTACCCTaGCCCTCCTTCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKPKPLP*PSFCCG
Trigger: GCCACAGCAGAAGGAGGGCCAGGGTAGAGGTTTGGG...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGGGTCCTTCATGGCCTTaGAGATGCACTGCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQGPSWP*RCTAFK
Trigger: TTTAAAAGCAGTGCATCTTCAAGGCCATGAAGGACC...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGGAGCACATGATTCAGTaGTTGTCCTGTAATGGCACA +
Preference number: 4 (lower is better)
Translates to: STPVGASRTQHGLSPSLWEHMIQ*LSCNGT
Trigger: TGTGCCATTACAGGACAATCACTGAATCATGTGCTC...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp CACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGGCAACCACGTATCGTTaGGAAGGGTGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: HHSLQSVTTQHLLLPSVQATTYR*EGWSTG
Trigger: CCCAGTGCTCCACCCTTCTCAACGATACGTGGTTGC...CTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR GCA 90 bp GCCCATTCCACTCCTCTAATCCAATCCTCATGTCCACAGAGAGAAAGCACTTTCAGTCTCCAGCACGGGTaGCACCATGTCGCCAACTGG +
Preference number: 4 (lower is better)
Translates to: AHSTPLIQSSCPQRESTFSLQHG*HHVANW
Trigger: CCAGTTGGCGACATGGTGGCACCCGTGCTGGAGACT...GAAAGTGCTTTCTCTCTGTGGACATGAGGATTGGATTAGAGGAGTGGAATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000545632.5
CDS-3UTR GCA 90 bp TCAGTGTACATAATGCAGGATCTGATGTCCTCCTCTGGTAAACAGCATGCACCGCCACGGAGCAGGACGTaGCAAAGGCCAGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SVYIMQDLMSSSGKQHAPPRSRT*QRPEVL
Trigger: GAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGG...CGGTGCATGCTGTTTACCAGAGGAGGACATCAGATCCTGCATTATGTACACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR GCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGATCTCTACCAAAGGCTaGCCATTCCACTCCTCTAAT +
Preference number: 4 (lower is better)
Translates to: STPVGASRTQHGLSPSLWISTKG*PFHSSN
Trigger: ATTAGAGGAGTGGAATGGGCAGCCTTTGGTAGAGAT...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGACACTCCAATCCTACTaGAACCACGTATCGTTGAGA +
Preference number: 4 (lower is better)
Translates to: STPVGASRTQHGLSPSLWTLQSY*NHVSLR
Trigger: TCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGT...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TCTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCAAGGCCAGAAGTCCTCTaGGCCCAGAGCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SFHTPILLQPRIVEKGGARPEVL*AQSSSS
Trigger: TGAACTGGAGCTCTGGGCCCAGAGGACTTCTGGCCT...TGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CCA 90 bp CACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGAGAAGGGTGGAGCACTaGGCAGACGCTGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: HHSLQSVTTQHLLLPSVQRRVEH*ADADSC
Trigger: ACAGCTGTCAGCGTCTGCCCAGTGCTCCACCCTTCT...CTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CCA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACGCCCTCCTTCTGCTGTaGCCCAACTGTACCCAGAGC +
Preference number: 4 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNALLLL*PNCTQS
Trigger: GCTCTGGGTACAGTTGGGCCACAGCAGAAGGAGGGC...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp AAAGGCTGCCCATTCCACTCCTCTAATCCAATCCTCATGTCCACAGAGAGAAAGGGGCAGCAAAACACGTaGGAAGTCTCCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: KGCPFHSSNPILMSTERKGQQNT*EVSSTG
Trigger: ACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCC...CTTTCTCTCTGTGGACATGAGGATTGGATTAGAGGAGTGGAATGGGCAGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000545632.5
CDS-3UTR TCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGGCTCCAGATACAAACTaGAACCGATTAATCATTGCC +
Preference number: 4 (lower is better)
Translates to: STPVGASRTQHGLSPSLWAPDTN*NRLIIA
Trigger: GGCAATGATTAATCGGTTTCAGTTTGTATCTGGAGC...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTGCACTGGGCAGACGCTaGCAGCTGTCACAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSALGRR*QLSQPH
Trigger: GTGGGGCTGTGACAGCTGTCAGCGTCTGCCCAGTGC...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGATATCCCTCATCTCGTaGCTTCAGCTGTCACATAAA +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQISLIS*LQLSHK
Trigger: TTTATGTGACAGCTGAAGTCACGAGATGAGGGATAT...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAAACCCCAGTTCTCTGCTaGGCACATGGGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKTPVLC*AHGHLQ
Trigger: TTGCAGATGCCCATGTGCTCAGCAGAGAACTGGGGT...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp AGTCTGAAGGCACATTACTTCTGGACCCTTTTTAGACCAGAGTCGAACAGCAGAAGTCTCCAGCACGGGTaGCACCATGTCGCCAACTGG +
Preference number: 4 (lower is better)
Translates to: SLKAHYFWTLFRPESNSRSLQHG*HHVANW
Trigger: CCAGTTGGCGACATGGTGGCACCCGTGCTGGAGACT...TCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGAAGTAATGTGCCTTCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR GCA 90 bp GAATCTGCAGCTGCAGAAACGATCAGTGTACATAATGCAGGATCTGATGTCCTCAGTCTCCAGCACGGGTaGCACCATGTCGCCAACTGG +
Preference number: 4 (lower is better)
Translates to: ESAAAETISVHNAGSDVLSLQHG*HHVANW
Trigger: CCAGTTGGCGACATGGTGGCACCCGTGCTGGAGACT...GAGGACATCAGATCCTGCATTATGTACACTGATCGTTTCTGCAGCTGCAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR GCA 90 bp AAGGCACATTACTTCTGGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCCCACGGAGCAGGACGTaGCAAAGGCCAGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: KAHYFWTLFRPESNSRICPRSRT*QRPEVL
Trigger: GAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGG...GCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGAAGTAATGTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR GCA 90 bp ACCAGAGTCGAACAGCAGAATCTGCAGCTGCAGAAACGATCAGTGTACATAATGCCACGGAGCAGGACGTaGCAAAGGCCAGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TRVEQQNLQLQKRSVYIMPRSRT*QRPEVL
Trigger: GAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGG...CATTATGTACACTGATCGTTTCTGCAGCTGCAGATTCTGCTGTTCGACTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR GCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGAAAGAAATGACTGGCTaGAGCTCAAACCTACAACTG +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQKEMTG*SSNLQL
Trigger: CAGTTGTAGGTTTGAGCTGCAGCCAGTCATTTCTTT...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTAGTCAGCAGGCACCTTaGTGCAGGAGAGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKASQQAP*CRRAPA
Trigger: TGCAGGGGCTCTCCTGCAGCAAGGTGCCTGCTGACT...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TCAGTGTACATAATGCAGGATCTGATGTCCTCCTCTGGTAAACAGCATGCACCGAGGCCAGAAGTCCTCTaGGCCCAGAGCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SVYIMQDLMSSSGKQHAPRPEVL*AQSSSS
Trigger: TGAACTGGAGCTCTGGGCCCAGAGGACTTCTGGCCT...CGGTGCATGCTGTTTACCAGAGGAGGACATCAGATCCTGCATTATGTACACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR CCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTTGTCGGGAGACAGTCTaGGGACAGTCAGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKACRETV*GQSAGT
Trigger: GGTGCCTGCTGACTGTCCCCAGACTGTCTCCCGACA...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTGGGCAGCAAAACACGTaGGAAGTCTCCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKAGQQNT*EVSSTG
Trigger: ACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCC...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp AGCAGCCTTTGTGGAGCTGTCCCTTCCACCCCAGTAGGAGCTTCTCGGACACAGTGCCCATATAGTTTTTaGACTTCAGGCCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: SSLCGAVPSTPVGASRTQCPYSF*TSGHKV
Trigger: TACTTTGTGGCCTGAAGTTCAAAAACTATATGGGCA...CTGTGTCCGAGAAGCTCCTACTGGGGTGGAAGGGACAGCTCCACAAAGGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTGCAACCACGTATCGTTaGGAAGGGTGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKAATTYR*EGWSTG
Trigger: CCCAGTGCTCCACCCTTCTCAACGATACGTGGTTGC...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTCCGCCTGGCCAACGGTaGAACCCAGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: SSPQLAKCNHSAPSASFCPPGQR*NPVSTK
Trigger: TTTAGTAGAGACTGGGTTTCACCGTTGGCCAGGCGG...ACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR TCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGTTTAGAGTGTACAGTTaGGTTGGCATACAGCATTCA +
Preference number: 4 (lower is better)
Translates to: STPVGASRTQHGLSPSLWFRVYS*VGIQHS
Trigger: TGAATGCTGTATGCCAACTCAACTGTACACTCTAAA...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACCCACGGAGCAGGACGTaGCAAAGGCCAGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LQSVTTQHLLLPSVQFFHPRSRT*QRPEVL
Trigger: GAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGG...GTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp TACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACTGGGCAGACGCTGACAGCAATAATCTCACTGGCTaGTGTAGGACACCATCTTTG +
Preference number: 4 (lower is better)
Translates to: YCNHVSLRRVEHWADADSNNLTG*CRTPSL
Trigger: CAAAGATGGTGTCCTACAGCAGCCAGTGAGATTATT...GCTGTCAGCGTCTGCCCAGTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp TCTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCAGGTGAGAAGGCCATCTaGGTGACTGTCAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: SFHTPILLQPRIVEKGGAGEKAI*VTVKLW
Trigger: CCACAGTTTGACAGTCACGCAGATGGCCTTCTCACC...TGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTGGCTGCGTCACGGACTaGCACTTTTGCCATCCTGCT +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKAGCVTD*HFCHPA
Trigger: AGCAGGATGGCAAAAGTGGCAGTCCGTGACGCAGCC...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAAGCTCTCCCGTCTCCCTaGCTGTTAATCCTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKALPSP*LLILEV
Trigger: CACTTCTAGGATTAACAGGCAGGGAGACGGGAGAGC...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTCTGCAGGAGAGCCCCTaGAAGAGCAGCCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKALQESP*KSSLCG
Trigger: TCCACAAAGGCTGCTCTTGCAGGGGCTCTCCTGCAG...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp CACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTCCCCGCACCCGGTTTaGGCAGCAAAACACGTGAGA +
Preference number: 4 (lower is better)
Translates to: HSLQSVTTQHLLLPSVQFSPHPV*AAKHVR
Trigger: TCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGA...AAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp CAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTGGGCAGCAAAACACGTaGGAAGTCTCCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: QLAKCNHSAPSASFCSVFGQQNT*EVSSTG
Trigger: ACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCC...AAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp TCTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCAGTATTCTGCAGAAGATaGTCCTCAGTGGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SFHTPILLQPRIVEKGGAVFCRR*SSVGGS
Trigger: TGAGCCTCCCACTGAGGATCATCTTCTGCAGAATAC...TGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR TCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCACCCACGTCCAGGACTaGGGAGCAGGGGCCAATGTT +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSTHVQD*GAGANV
Trigger: AACATTGGCCCCTGCTCCTCAGTCCTGGACGTGGGT...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358232.11
ENST00000540766.5
CDS-3UTR TCA 90 bp TCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTGCTCCGTGGAAAGCATaGGCAATGATCATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SSPQLAKCNHSAPSASFCAPWKA*AMIMEP
Trigger: TGGCTCCATGATCATTGCTCATGCTTTCCACGGAGC...ACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAAAGAAAGAGAATCGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKRKRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCGATTCTCTTTCT...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAAGTTTGTGAAATGCTATaGGCCAGACCCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKVCEML*ARPSTL
Trigger: CAGTGTGGAGGGTCTGGCTCATAGCATTTCACAAAC...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGAGCATGCAGAAAAGTTaGAAGAATTGTACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: STPVGASRTQHGLSPSLWSMQKS*KNCTVN
Trigger: GTTCACTGTACAATTCTTTCAACTTTTCTGCATGCT...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGCGGGTCCCAGATCTCTaGGTCCACCAGAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGRVPDL*VHQSGA
Trigger: AGCCCCACTCTGGTGGACTCAGAGATCTGGGACCCG...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp GTTGTGCTCAATACAGTCATCAGTGGAGTCGCACTCACCCCAGACAACCACCTTCAGGGGCCAATGTTGTaGTCAATACAGTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: VVLNTVISGVALTPDNHLQGPML*SIQSSV
Trigger: CACTGATGACTGTATTGAGCACAACATTGGCCCCTG...AAGGTGGTTGTCTGGGGTGAGTGCGACTCCACTGATGACTGTATTGAGCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR GCA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACTTCAAGCGGTTCTCCTaGCTCAGCCTCTGGAACATC +
Preference number: 4 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNFKRFS*LSLWNI
Trigger: GATGTTCCAGAGGCTGAGGCAGGAGAACCGCTTGAA...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGTCGATCTCGGCCCACTaGAACCTCCTCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMSISAH*NLLLLL
Trigger: CAGGAGGAGGAGGAGGTTGCAGTGGGCCGAGATCGA...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp CTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACTCCCAGACTAGGTCTTaGACACCATCAAAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LSTLQSYCNHVSLRRVEHSQTRS*TPSKCP
Trigger: AGGACACTTTGATGGTGTCCAAGACCTAGTCTGGGA...GTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CCA 90 bp TCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTCACCATGTCGCCAACTaGTCAGCCGCACAAACAAGA +
Preference number: 4 (lower is better)
Translates to: SSPQLAKCNHSAPSASFCHHVAN*SAAQTR
Trigger: TCTTGTTTGTGCGGCTGACCAGTTGGCGACATGGTG...ACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CCA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACTTCTCGGACACAGCATaGCCTCTCTCCTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNFSDTA*PLSFTL
Trigger: CAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAA...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TTCTTAGCTGCCTTACAAGCTGAGGCAAGCAGAGTCTTTGAACTGTTACAAGTAGGGCAGCAAAACACGTaGGAAGTCTCCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: FLAALQAEASRVFELLQVGQQNT*EVSSTG
Trigger: ACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCC...TACTTGTAACAGTTCAAAGACTCTGCTTGCCTCAGCTTGTAAGGCAGCTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540799.1
CDS-3UTR TCA 90 bp TCTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACTGCTTTTTCCACAATaGCCAGGTTCGATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SFHTPILLQPRIVEKGGALLFPQ*PGSISG
Trigger: TCCAGAGATCGAACCTGGTCATTGTGGAAAAAGCAG...TGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp GGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATACCCACGTCCAGGACTaGGGAGCAGGGGCCAATGTT +
Preference number: 4 (lower is better)
Translates to: GFDLFLHSGSSHLFLELDTHVQD*GAGANV
Trigger: AACATTGGCCCCTGCTCCTCAGTCCTGGACGTGGGT...ATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR TCA 90 bp CACCTTTTTGTCTCGACTCCCAGTGAAGAAATACTTGCTGTCAGGACTCCAATCGGGAGGTGGAGGTTGTaGCAAAGCAAGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: HLFVSTPSEEILAVRTPIGRWRL*QSKTPS
Trigger: AGATGGAGTCTTGCTTTGTCACAACCTCCACCTCCC...GATTGGAGTCCTGACAGCAAGTATTTCTTCACTGGGAGTCGAGACAAAAAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR TCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAACTCAGCTGGCACCACTaGCATGCTGTTTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQLSWHH*HAVSST
Trigger: GGTACTGGAAACAGCATGTCAGTGGTGCCAGCTGAG...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TCTGGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCAGCTGCAGAAACGAGGTCCTTCATGGCCTaGTTATCCTCTATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SGPFLDQSRTAESAAAETRSFMA*LSSISQ
Trigger: CTGGGAAATAGAGGATAATCAGGCCATGAAGGACCT...CGTTTCTGCAGCTGCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542430.5
CDS-3UTR GCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGCCACGGAGCAGGACGTaGCAAAGGCCAGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEPRSRT*QRPEVL
Trigger: GAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGG...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTGGTGAGAAGGCCATCTaGGTGACTGTCAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKAGEKAI*VTVKLW
Trigger: CCACAGTTTGACAGTCACGCAGATGGCCTTCTCACC...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp CTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACACACTCCAATCCTACTaGAACCACGTATCGTTGAGA +
Preference number: 4 (lower is better)
Translates to: LSTLQSYCNHVSLRRVEHTLQSY*NHVSLR
Trigger: TCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGT...GTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR GCA 90 bp TCTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCATTCTGTTTCCAAAGGTaGAACGCTCCGTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SFHTPILLQPRIVEKGGAFCFQR*NAPWKA
Trigger: TGCTTTCCACGGAGCGTTGCACCTTTGGAAACAGAA...TGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCGGAAGAGGCTGCCTTTaGATCCCTCTGTGTCGGGAG +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSGRGCL*IPLCRE
Trigger: CTCCCGACACAGAGGGATGCAAAGGCAGCCTCTTCC...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTTCCCCGCACCCGGTTTaGGCAGCAAAACACGTGAGA +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSSPHPV*AAKHVR
Trigger: TCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGA...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TTCTTAGCTGCCTTACAAGCTGAGGCAAGCAGAGTCTTTGAACTGTTACAAGTATCCCCGCACCCGGTTTaGGCAGCAAAACACGTGAGA +
Preference number: 4 (lower is better)
Translates to: FLAALQAEASRVFELLQVSPHPV*AAKHVR
Trigger: TCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGA...TACTTGTAACAGTTCAAAGACTCTGCTTGCCTCAGCTTGTAAGGCAGCTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540799.1
CDS-3UTR CCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTAGGCCAGAAGTCCTCTaGGCCCAGAGCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSRPEVL*AQSSSS
Trigger: TGAACTGGAGCTCTGGGCCCAGAGGACTTCTGGCCT...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TTAGCTGCCTTACAAGCTGAGGCAAGCAGAGTCTTTGAACTGTTACAAGTAACAAGGCCAGAAGTCCTCTaGGCCCAGAGCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LAALQAEASRVFELLQVTRPEVL*AQSSSS
Trigger: TGAACTGGAGCTCTGGGCCCAGAGGACTTCTGGCCT...TGTTACTTGTAACAGTTCAAAGACTCTGCTTGCCTCAGCTTGTAAGGCAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540799.1
CDS-3UTR CCA 90 bp AAACGATCAGTGTACATAATGCAGGATCTGATGTCCTCCTCTGGTAAACAGCATAGGCCAGAAGTCCTCTaGGCCCAGAGCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: KRSVYIMQDLMSSSGKQHRPEVL*AQSSSS
Trigger: TGAACTGGAGCTCTGGGCCCAGAGGACTTCTGGCCT...ATGCTGTTTACCAGAGGAGGACATCAGATCCTGCATTATGTACACTGATCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR CCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGAGAAGGGTGGAGCACTaGGCAGACGCTGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMRRVEH*ADADSC
Trigger: ACAGCTGTCAGCGTCTGCCCAGTGCTCCACCCTTCT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp ACCAGAGTCGAACAGCAGAATCTGCAGCTGCAGAAACGATCAGTGTACATAATGCACCATGTCGCCAACTaGTCAGCCGCACAAACAAGA +
Preference number: 4 (lower is better)
Translates to: TRVEQQNLQLQKRSVYIMHHVAN*SAAQTR
Trigger: TCTTGTTTGTGCGGCTGACCAGTTGGCGACATGGTG...CATTATGTACACTGATCGTTTCTGCAGCTGCAGATTCTGCTGTTCGACTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR CCA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAAACAGAAAACTTTTCCTaGCAGACAGGAAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKTENFS*QTGKGP
Trigger: TGGGCCCTTTCCTGTCTGCCAGGAAAAGTTTTCTGT...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTACCTCCTCCTCCTCCTaGGTTCAAGCGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSTSSSS*VQAVLL
Trigger: CAGGAGAACCGCTTGAACCCAGGAGGAGGAGGAGGT...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTACAGCCAGTGTGAGCTaGGTTTCTGTTGCCCAACTC +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKATASVS*VSVAQL
Trigger: GAGTTGGGCAACAGAAACCCAGCTCACACTGGCTGT...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 72 bp CAACTTGAAAACTCAGTCTCTCTAGGCAAGGCCTACTaGCAGATAACCTTGGGAGTTCTGTGCTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: QLENSVSLGKAY*QITLGVLCWEE
Trigger: TTCCTCCCAGCACAGAACTCCCAAGGTTATCTGCAAGTAGGCCTTGCCTAGAGAGACTGAGTTTTCAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp AGGCACATTACTTCTGGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCATTGACTCGGGCGGTGTaGCCATTCAAGTTGGTAACA +
Preference number: 4 (lower is better)
Translates to: RHITSGPFLDQSRTAESALTRAV*PFKLVT
Trigger: TGTTACCAACTTGAATGGTCACACCGCCCGAGTCAA...TGCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGAAGTAATGTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542430.5
CDS-3UTR TCA 90 bp ATGCAGGATCTGATGTCCTCCTCTGGTAAACAGCATGCACCGCATAAACAGGTCGGTCCTTCATGGCCTTaGAGATGCACTGCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: MQDLMSSSGKQHAPHKQVGPSWP*RCTAFK
Trigger: TTTAAAAGCAGTGCATCTTCAAGGCCATGAAGGACC...GACCTGTTTATGCGGTGCATGCTGTTTACCAGAGGAGGACATCAGATCCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR TCA 90 bp CAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACTGCGTATTCTGCAGAAGATaGTCCTCAGTGGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QSVTTQHLLLPSVQFFHCVFCRR*SSVGGS
Trigger: TGAGCCTCCCACTGAGGATCATCTTCTGCAGAATAC...GCAGTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR TCA 90 bp TTTGGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTACCCACGTCCAGGACTaGGGAGCAGGGGCCAATGTT +
Preference number: 4 (lower is better)
Translates to: FGFDLFLHSGSSHLFLELTHVQD*GAGANV
Trigger: AACATTGGCCCCTGCTCCTCAGTCCTGGACGTGGGT...AAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR TCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAGGGAGGTGGAGGTTGTaGCAAAGCAAGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQGRWRL*QSKTPS
Trigger: AGATGGAGTCTTGCTTTGTCACAACCTCCACCTCCC...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCCCGCCTGGCCAACGGTaGAACCCAGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSPPGQR*NPVSTK
Trigger: TTTAGTAGAGACTGGGTTTCACCGTTGGCCAGGCGG...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358232.11
ENST00000540766.5
CDS-3UTR GCA 90 bp TCTGGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCAGCTGCAGAAACGAGCAGAATCTGCAGCTaGAGAAACGATCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: SGPFLDQSRTAESAAAETSRICS*RNDQCT
Trigger: TGTACACTGATCGTTTCTGCAGCTGCAGATTCTGCT...CGTTTCTGCAGCTGCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542430.5
ENST00000544267.5
ENST00000545632.5
CDS-3UTR GCA 90 bp CATTACTTCTGGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCAGCTGCTCGAACAGCAGAATCTaGAGCTGCAGAAACGATCAG +
Preference number: 4 (lower is better)
Translates to: HYFWTLFRPESNSRICSCSNSRI*SCRNDQ
Trigger: CTGATCGTTTCTGCAGCTGCAGATTCTGCTGTTCGA...GCAGCTGCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGAAGTAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR GCA 90 bp ACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCAGCTGCAGAAACGATCAGTCGAACAGCAGAATCTaGAGCTGCAGAAACGATCAG +
Preference number: 4 (lower is better)
Translates to: TLFRPESNSRICSCRNDQSNSRI*SCRNDQ
Trigger: CTGATCGTTTCTGCAGCTGCAGATTCTGCTGTTCGA...CTGATCGTTTCTGCAGCTGCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR GCA 90 bp CTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACATGTATCTGAGGCCTTaGAATTTCATGCCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LSTLQSYCNHVSLRRVEHMYLRP*NFMPSH
Trigger: GTGACTTGGCATGAAATTGCAAGGCCTCAGATACAT...GTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACTTCTGTTTCCAAAGGTaGAACGCTCCGTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNFCFQR*NAPWKA
Trigger: TGCTTTCCACGGAGCGTTGCACCTTTGGAAACAGAA...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTAGCTCAGATGCTCACTaGCTTGGTATACACGCACAC +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKASSDAH*LGIHAH
Trigger: GTGTGCGTGTATACCAAGGCAGTGAGCATCTGAGCT...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACTCCCAGACTAGGTCTTaGACACCATCAAAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNSQTRS*TPSKCP
Trigger: AGGACACTTTGATGGTGTCCAAGACCTAGTCTGGGA...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTCAATACAGTCATCAGTaGAGTCGCACTCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKAQYSHQ*SRTHPR
Trigger: TCTGGGGTGAGTGCGACTCCACTGATGACTGTATTG...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp CAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACTGCCAATACAGTCATCAGTaGAGTCGCACTCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: QSVTTQHLLLPSVQFFHCQYSHQ*SRTHPR
Trigger: TCTGGGGTGAGTGCGACTCCACTGATGACTGTATTG...GCAGTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CCA 90 bp GGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATAGAAGGGTGGAGCACTaGGCAGACGCTGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: GFDLFLHSGSSHLFLELDRRVEH*ADADSC
Trigger: ACAGCTGTCAGCGTCTGCCCAGTGCTCCACCCTTCT...ATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR TCA 90 bp AAGATAAGCAGAGAGCCAAAGCAAATCCATTTCCAAAGTTTAAAGTCTGAAGGCGGGCAGCAAAACACGTaGGAAGTCTCCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: KISREPKQIHFQSLKSEGGQQNT*EVSSTG
Trigger: ACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCC...GCCTTCAGACTTTAAACTTTGGAAATGGATTTGCTTTGGCTCTCTGCTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR TCA 90 bp TTCCACTCCTCTAATCCAATCCTCATGTCCACAGAGAGAAAGCACTTTCTGAAATCCACTGTATGCAATTaGCTCGGGCGGTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: FHSSNPILMSTERKHFLKSTVCN*LGRCDH
Trigger: ATGGTCACACCGCCCGAGTCAATTGCATACAGTGGA...TTTCAGAAAGTGCTTTCTCTCTGTGGACATGAGGATTGGATTAGAGGAGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542430.5
CDS-3UTR TCA 90 bp TCAGTGTACATAATGCAGGATCTGATGTCCTCCTCTGGTAAACAGCATGCACCGGGTCCTTCATGGCCTTaGAGATGCACTGCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: SVYIMQDLMSSSGKQHAPGPSWP*RCTAFK
Trigger: TTTAAAAGCAGTGCATCTTCAAGGCCATGAAGGACC...CGGTGCATGCTGTTTACCAGAGGAGGACATCAGATCCTGCATTATGTACACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR TCA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACTCATACCCATGTATCTaGGGCCTTGCAATTTCATGC +
Preference number: 4 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNSYPCI*GLAISC
Trigger: GCATGAAATTGCAAGGCCTCAGATACATGGGTATGA...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TCTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCAGCTCCAGATACAAACTaGAACCGATTAATCATTGCC +
Preference number: 4 (lower is better)
Translates to: SFHTPILLQPRIVEKGGAAPDTN*NRLIIA
Trigger: GGCAATGATTAATCGGTTTCAGTTTGTATCTGGAGC...TGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp CACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGGGCAAGCAGAGTCTTTaGACTGTTACAAGTAACACA +
Preference number: 4 (lower is better)
Translates to: HHSLQSVTTQHLLLPSVQGKQSL*TVTSNT
Trigger: TGTGTTACTTGTAACAGTTCAAAGACTCTGCTTGCC...CTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp CACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTAGAAGGCCATCTGCGTaGCTGTCAAACTGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: HSLQSVTTQHLLLPSVQFRRPSA*LSNCGK
Trigger: TTTTCCACAGTTTGACAGTCACGCAGATGGCCTTCT...AAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp CTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACACAGTGCACATTTATTaGCTCTGTGTATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: LSTLQSYCNHVSLRRVEHTVHIY*LCVSSQ
Trigger: CTGTGAAGATACACAGAGTCAATAAATGTGCACTGT...GTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR TCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTGCTCCGTGGAAAGCATaGGCAATGATCATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSAPWKA*AMIMEP
Trigger: TGGCTCCATGATCATTGCTCATGCTTTCCACGGAGC...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACAGAAAGAGAATCGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LQSVTTQHLLLPSVQFFHRKRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCGATTCTCTTTCT...GTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR TCA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAAAGCTTGGCTCCAATTTaGATGAAATATTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKSLAPI*MKYSKA
Trigger: GGCCTTGGAATATTTCATTCAAATTGGAGCCAAGCT...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp GTCATCAGTGGAGTCGCACTCACCCCAGACAACCACCTTTTTGTCTCGACTCCCTTAAGTCCATTACAGTaGACATTTATTGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: VISGVALTPDNHLFVSTPLSPLQ*TFIDSV
Trigger: CACAGAGTCAATAAATGTGCACTGTAATGGACTTAA...GGGAGTCGAGACAAAAAGGTGGTTGTCTGGGGTGAGTGCGACTCCACTGATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR GCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTCTGGCACCACTGACATaGTGTTTCCAGTACCCTTTT +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKALAPLT*CFQYPF
Trigger: AAAAGGGTACTGGAAACAGCATGTCAGTGGTGCCAG...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp CCAAAGCAAATCCATTTCCAAAGTTTAAAGTCTGAAGGCACATTACTTCTGGACTCCCCGCACCCGGTTTaGGCAGCAAAACACGTGAGA +
Preference number: 4 (lower is better)
Translates to: PKQIHFQSLKSEGTLLLDSPHPV*AAKHVR
Trigger: TCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGA...GTCCAGAAGTAATGTGCCTTCAGACTTTAAACTTTGGAAATGGATTTGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR CCA 90 bp CCAAAGCAAATCCATTTCCAAAGTTTAAAGTCTGAAGGCACATTACTTCTGGACAGGCCAGAAGTCCTCTaGGCCCAGAGCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PKQIHFQSLKSEGTLLLDRPEVL*AQSSSS
Trigger: TGAACTGGAGCTCTGGGCCCAGAGGACTTCTGGCCT...GTCCAGAAGTAATGTGCCTTCAGACTTTAAACTTTGGAAATGGATTTGCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR CCA 90 bp CACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGACCAGGTTCGATCTCTaGAAACAGCTAGTAAGAACT +
Preference number: 4 (lower is better)
Translates to: HHSLQSVTTQHLLLPSVQTRFDL*KQLVRT
Trigger: AGTTCTTACTAGCTGTTTCCAGAGATCGAACCTGGT...CTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CCA 90 bp TTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACCAATACAGTCATCAGTaGAGTCGCACTCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: LQSVTTQHLLLPSVQFFHQYSHQ*SRTHPR
Trigger: TCTGGGGTGAGTGCGACTCCACTGATGACTGTATTG...GTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAAGATGCTCACTGCCTTaGTATACACGCACACACACC +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQRCSLP*YTRTHT
Trigger: GGTGTGTGTGCGTGTATACCAAGGCAGTGAGCATCT...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGCCTCTGAATCTGCTCTaGAAGCCTGCATGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMPLNLL*KPACTW
Trigger: CCAAGTGCATGCAGGCTTCCAGAGCAGATTCAGAGG...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGCTGAGTCCACCAGAGTaGGGCTCAGAGTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: VEWKPDSYTNLISTFRDELSPPE*GSESSI
Trigger: GATAGAGGACTCTGAGCCCCACTCTGGTGGACTCAG...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGGCCAAGCAGCCATCCTaGAAGGTGAAAGCCTCATAC +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMAKQPS*KVKASY
Trigger: GTATGAGGCTTTCACCTTCCAGGATGGCTGCTTGGC...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTCTTCTTCCTCTTTGCTaGCTGGAACGCAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKALLPLC*LERKDH
Trigger: ATGGTCTTTGCGTTCCAGCCAGCAAAGAGGAAGAAG...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 72 bp CTCTGTGTATCTTCACAGTGTGATCTTCACCACAGCTaGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LCVSSQCDLHHS*QSVTTQHLLLP
Trigger: AGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGATCACACTGTGAAGATACACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR TCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGTCCACTGTATGCAATTaGCTCGGGCGGTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: VEWKPDSYTNLISTFRDESTVCN*LGRCDH
Trigger: ATGGTCACACCGCCCGAGTCAATTGCATACAGTGGA...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATTCCACTGTATGCAATTaGCTCGGGCGGTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: GFDLFLHSGSSHLFLELDSTVCN*LGRCDH
Trigger: ATGGTCACACCGCCCGAGTCAATTGCATACAGTGGA...ATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp GATCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTACCATCAAAGTGTCCTaGAATGACAATCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: DLHHSLQSVTTQHLLLPSTIKVS*NDNLWS
Trigger: ACTCCAGAGATTGTCATTTCAGGACACTTTGATGGT...AGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp CACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTCATACCCATGTATCTaGGGCCTTGCAATTTCATGC +
Preference number: 4 (lower is better)
Translates to: HSLQSVTTQHLLLPSVQFSYPCI*GLAISC
Trigger: GCATGAAATTGCAAGGCCTCAGATACATGGGTATGA...AAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGGAACTTCTCATTAGGTaGGAAGGCCATCTGCGTGAC +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMELLIR*EGHLRD
Trigger: GTCACGCAGATGGCCTTCTCACCTAATGAGAAGTTC...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAACTGCTTTTTCCACAATaGCCAGGTTCGATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQLLFPQ*PGSISG
Trigger: TCCAGAGATCGAACCTGGTCATTGTGGAAAAAGCAG...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGCCCTTTCTTCCAGAATaGAGCACCCCAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEPFLPE*STPVLC
Trigger: GCAGAGAACTGGGGTGCTTCATTCTGGAAGAAAGGG...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTAGTCTCCAGCACGGGTaGCACCATGTCGCCAACTGG +
Preference number: 4 (lower is better)
Translates to: CFLNIIKYPARVQICFVPSLQHG*HHVANW
Trigger: CCAGTTGGCGACATGGTGGCACCCGTGCTGGAGACT...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TTACAAGCTGAGGCAAGCAGAGTCTTTGAACTGTTACAAGTAACACAAAATATTCCACGGAGCAGGACGTaGCAAAGGCCAGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LQAEASRVFELLQVTQNIPRSRT*QRPEVL
Trigger: GAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGG...AATATTTTGTGTTACTTGTAACAGTTCAAAGACTCTGCTTGCCTCAGCTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540799.1
CDS-3UTR GCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTAGCAGAATCTGCAGCTaGAGAAACGATCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKASRICS*RNDQCT
Trigger: TGTACACTGATCGTTTCTGCAGCTGCAGATTCTGCT...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp CACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTAGCAGAATCTGCAGCTaGAGAAACGATCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: HSLQSVTTQHLLLPSVQFSRICS*RNDQCT
Trigger: TGTACACTGATCGTTTCTGCAGCTGCAGATTCTGCT...AAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp AAGGCACATTACTTCTGGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCAGCAGAATCTGCAGCTaGAGAAACGATCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: KAHYFWTLFRPESNSRICSRICS*RNDQCT
Trigger: TGTACACTGATCGTTTCTGCAGCTGCAGATTCTGCT...GCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGAAGTAATGTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR GCA 90 bp CAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTTCGAACAGCAGAATCTaGAGCTGCAGAAACGATCAG +
Preference number: 4 (lower is better)
Translates to: QLAKCNHSAPSASFCSVFSNSRI*SCRNDQ
Trigger: CTGATCGTTTCTGCAGCTGCAGATTCTGCTGTTCGA...AAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp CACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTATCTCTACCAAAGGCTaGCCATTCCACTCCTCTAAT +
Preference number: 4 (lower is better)
Translates to: HSLQSVTTQHLLLPSVQFISTKG*PFHSSN
Trigger: ATTAGAGGAGTGGAATGGGCAGCCTTTGGTAGAGAT...AAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp CGAACAGCAGAATCTGCAGCTGCAGAAACGATCAGTGTACATAATGCAGGATCTATCTCTACCAAAGGCTaGCCATTCCACTCCTCTAAT +
Preference number: 4 (lower is better)
Translates to: RTAESAAAETISVHNAGSISTKG*PFHSSN
Trigger: ATTAGAGGAGTGGAATGGGCAGCCTTTGGTAGAGAT...AGATCCTGCATTATGTACACTGATCGTTTCTGCAGCTGCAGATTCTGCTGTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545632.5
CDS-3UTR GCA 90 bp TCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTAGGTTGCCAGTGAACTaGATTTACCCAGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: SSPQLAKCNHSAPSASFCRLPVN*IYPVFM
Trigger: CATGAAAACTGGGTAAATGCAGTTCACTGGCAACCT...ACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACATGTATCTGAGGCCTTaGAATTTCATGCCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNMYLRP*NFMPSH
Trigger: GTGACTTGGCATGAAATTGCAAGGCCTCAGATACAT...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp CACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTCCACTCAGCACCTTCTaGTTCCTTCTGTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: HSLQSVTTQHLLLPSVQFPLSTF*FLLFSF
Trigger: AAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGG...AAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR GCA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACGCTCAAACCTACAACTaGTTGCGAAACTCTACAATG +
Preference number: 4 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNAQTYN*LRNSTM
Trigger: CATTGTAGAGTTTCGCAAGCAGTTGTAGGTTTGAGC...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTCAAGTCACCTGTGATTaGTCTTTTCTCTTCCATGGA +
Preference number: 4 (lower is better)
Translates to: SSPQLAKCNHSAPSASFCQVTCD*SFLFHG
Trigger: TCCATGGAAGAGAAAAGACCAATCACAGGTGACTTG...ACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CCA 90 bp TCAGTGTACATAATGCAGGATCTGATGTCCTCCTCTGGTAAACAGCATGCACCGAAGGCACATTACTTCTaGACCCTTTTTAGACCAGAG +
Preference number: 4 (lower is better)
Translates to: SVYIMQDLMSSSGKQHAPKAHYF*TLFRPE
Trigger: CTCTGGTCTAAAAAGGGTCCAGAAGTAATGTGCCTT...CGGTGCATGCTGTTTACCAGAGGAGGACATCAGATCCTGCATTATGTACACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544267.5
CDS-3UTR CCA 90 bp GGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATATTAGCCGGAATTGGTaGTGTGCCTCTAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GFDLFLHSGSSHLFLELDISRNW*CASSPS
Trigger: GCTGGGACTAGAGGCACACCACCAATTCCGGCTAAT...ATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR CCA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAAAGAGCACACTTGGCGTaGTATGCTATCTATAGAAAA +
Preference number: 4 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKRAHLA*YAIYRK
Trigger: TTTTCTATAGATAGCATACCACGCCAAGTGTGCTCT...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGAAGCCTGCATGCACTTaGGTCAGAACAAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMKPACT*VRTSPC
Trigger: ACATGGGCTTGTTCTGACCCAAGTGCATGCAGGCTT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATTTGACTCGGGCGGTGTaGCCATTCAAGTTGGTAACA +
Preference number: 4 (lower is better)
Translates to: GFDLFLHSGSSHLFLELDLTRAV*PFKLVT
Trigger: TGTTACCAACTTGAATGGTCACACCGCCCGAGTCAA...ATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp GGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCAGCTGCAGAAACGATCACTGCTTTTAAAAGCTaGTTATCCTCTATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GPFLDQSRTAESAAAETITAFKS*LSSISQ
Trigger: CTGGGAAATAGAGGATAATCAGCTTTTAAAAGCAGT...GATCGTTTCTGCAGCTGCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR TCA 90 bp TCTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCAAAAAGTCTAGTTGTCTaGTCAGTACCAACAGTGATA +
Preference number: 4 (lower is better)
Translates to: SFHTPILLQPRIVEKGGAKSLVV*SVPTVI
Trigger: TATCACTGTTGGTACTGATCAGACAACTAGACTTTT...TGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTTGTCTCGACTCCCAGTaGAGAAATACTTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSCLDSQ*RNTCCQ
Trigger: CTGACAGCAAGTATTTCTTCACTGGGAGTCGAGACA...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAGGGCAAATCCAGTCATaGAGAAAGAACAGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQGQIQS*RKNRGS
Trigger: AGAACCTCTGTTCTTTCTTCATGACTGGATTTGCCC...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGTCGAACAGCAGAATCTaGAGCTGCAGAAACGATCAG +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMSNSRI*SCRNDQ
Trigger: CTGATCGTTTCTGCAGCTGCAGATTCTGCTGTTCGA...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp GCTAATATTGGTACTTCTGGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTTCGAACAGCAGAATCTaGAGCTGCAGAAACGATCAG +
Preference number: 4 (lower is better)
Translates to: ANIGTSGPFLDQSRTAESSNSRI*SCRNDQ
Trigger: CTGATCGTTTCTGCAGCTGCAGATTCTGCTGTTCGA...AGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGAAGTACCAATATTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545632.5
CDS-3UTR GCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCCAGGGGCCAATGTTGTaGTCAATACAGTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSQGPML*SIQSSV
Trigger: CACTGATGACTGTATTGAGCACAACATTGGCCCCTG...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358232.11
ENST00000540766.5
CDS-3UTR GCA 90 bp CTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACGTTCAGTTTTTCCACTaGAATTCTTCCAGCATAATT +
Preference number: 4 (lower is better)
Translates to: LSTLQSYCNHVSLRRVEHVQFFH*NSSSII
Trigger: AATTATGCTGGAAGAATTGCAGTGGAAAAACTGAAC...GTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR GCA 90 bp TTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACCCACTCAGCACCTTCTaGTTCCTTCTGTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LQSVTTQHLLLPSVQFFHPLSTF*FLLFSF
Trigger: AAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGG...GTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR GCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTCTCAGAGCAGGGCCATaGCTAACCCGTATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CFLNIIKYPARVQICFVPLRAGP*LTRIWG
Trigger: TCCCCAGATACGGGTTAGGCATGGCCCTGCTCTGAG...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTCCACTTTTGCCATCCTaGTCAGAGCAGGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: CFLNIIKYPARVQICFVPPLLPS*SEQGHA
Trigger: GGCATGGCCCTGCTCTGAGCAGGATGGCAAAAGTGG...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTAACCCTCACCTAGACTaGCCTATGAAATACCTAGAA +
Preference number: 4 (lower is better)
Translates to: QLISRKMGRAFWSLRFKANPHLD*PMKYLE
Trigger: TTCTAGGTATTTCATAGGGCAGTCTAGGTGAGGGTT...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TTCTGCAATCATCATTGCCACATGCTAATATTGGTACATCAGTATTTGGCAAAATCCCCGCACCCGGTTTaGGCAGCAAAACACGTGAGA +
Preference number: 4 (lower is better)
Translates to: FCNHHCHMLILVHQYLAKSPHPV*AAKHVR
Trigger: TCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGA...TTTTGCCAAATACTGATGTACCAATATTAGCATGTGGCAATGATGATTGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR CCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTTCTCCCTCCCCATCCTaGTCTGTCTGCCTTGACTCC +
Preference number: 4 (lower is better)
Translates to: CFLNIIKYPARVQICFVPSPSPS*SVCLDS
Trigger: GGAGTCAAGGCAGACAGACCAGGATGGGGAGGGAGA...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTGGAACGCAAAGACCATaGCAGGAGGCCAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CFLNIIKYPARVQICFVPGTQRP*QEAKQP
Trigger: TGGCTGCTTGGCCTCCTGCCATGGTCTTTGCGTTCC...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTATGCCAAGTCACCTGTaGTTGGTCTTTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSMPSHL*LVFSLP
Trigger: TGGAAGAGAAAAGACCAATCACAGGTGACTTGGCAT...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GATCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGAAGCTATATCTCCCTaGAAGACAGCTTTATTTGAT +
Preference number: 4 (lower is better)
Translates to: DLHHSLQSVTTQHLLLPSEAISP*KTALFD
Trigger: ATCAAATAAAGCTGTCTTTCAGGGAGATATAGCTTC...AGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGAGAAGGCCATCTGCGTaGCTGTCAAACTGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: VEWKPDSYTNLISTFRDERRPSA*LSNCGK
Trigger: TTTTCCACAGTTTGACAGTCACGCAGATGGCCTTCT...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TTCCAGGTATATAAGCAAATCTTTCCACACTCCAATCCTACTGCAACCACGTATTGTCTCGACTCCCAGTaGAGAAATACTTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: FQVYKQIFPHSNPTATTYCLDSQ*RNTCCQ
Trigger: CTGACAGCAAGTATTTCTTCACTGGGAGTCGAGACA...ATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGATTTGCTTATATACCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR TCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTAAATATGGATGGCCATaGGCCACATGTGGCTATGAA +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSKYGWP*ATCGYE
Trigger: TTCATAGCCACATGTGGCTCATGGCCATCCATATTT...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACTGGCTCCAATTTGAATaGAATATTCCAAGGCCATTT +
Preference number: 4 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNWLQFE*NIPRPF
Trigger: AAATGGCCTTGGAATATTTCATTCAAATTGGAGCCA...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGCTGGTCTGTCTGCCTTaGCTCCTTTCATATGAGAGA +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGLVCLP*LLSYER
Trigger: TCTCTCATATGAAAGGAGTCAAGGCAGACAGACCAG...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TTCCACTCCTCTAATCCAATCCTCATGTCCACAGAGAGAAAGCACTTTCTGAAAAGCAGAATCTGCAGCTaGAGAAACGATCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: FHSSNPILMSTERKHFLKSRICS*RNDQCT
Trigger: TGTACACTGATCGTTTCTGCAGCTGCAGATTCTGCT...TTTCAGAAAGTGCTTTCTCTCTGTGGACATGAGGATTGGATTAGAGGAGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000545632.5
CDS-3UTR GCA 90 bp ATGCAGGATCTGATGTCCTCCTCTGGTAAACAGCATGCACCGCATAAACAGGTCTTCTGCAATCATCATTaGCACATGCTAATATTGGTA +
Preference number: 4 (lower is better)
Translates to: MQDLMSSSGKQHAPHKQVFCNHH*HMLILV
Trigger: TACCAATATTAGCATGTGGCAATGATGATTGCAGAA...GACCTGTTTATGCGGTGCATGCTGTTTACCAGAGGAGGACATCAGATCCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR GCA 90 bp TTCCAGGTATATAAGCAAATCTTTCCACACTCCAATCCTACTGCAACCACGTATCAGGGGCCAATGTTGTaGTCAATACAGTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: FQVYKQIFPHSNPTATTYQGPML*SIQSSV
Trigger: CACTGATGACTGTATTGAGCACAACATTGGCCCCTG...ATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGATTTGCTTATATACCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR GCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGCCACTCAGCACCTTCTaGTTCCTTCTGTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMPLSTF*FLLFSF
Trigger: AAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGG...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACATATACAGCTGTCACTaGATTGTCAATCTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNIYSCH*IVNLPN
Trigger: ATTTGGCAGATTGACAATGCAGTGACAGCTGTATAT...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTGGTTCAAAGCTCAGATaGTCACTGCCTTGGTATACA +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSGSKLR*SLPWYT
Trigger: TGTATACCAAGGCAGTGAGCATCTGAGCTTTGAACC...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTGTCTTTTCTCTTCCATaGAGCAAAAAGTCTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SSPQLAKCNHSAPSASFCVFSLP*SKKSSC
Trigger: ACAACTAGACTTTTTGCTCCATGGAAGAGAAAAGAC...ACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CCA 90 bp CAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTGACAGTGGCTCCTTCTaGAAGATCACTATCTTGATT +
Preference number: 4 (lower is better)
Translates to: QLAKCNHSAPSASFCSVFDSGSF*KITILI
Trigger: AATCAAGATAGTGATCTTCCAGAAGGAGCCACTGTC...AAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAACCAGGTTCGATCTCTaGAAACAGCTAGTAAGAACT +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQTRFDL*KQLVRT
Trigger: AGTTCTTACTAGCTGTTTCCAGAGATCGAACCTGGT...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp GAATTCTGCAATCATCATTGCCACATGCTAATATTGGTACATCAGTATTTGGCACACCATGTCGCCAACTaGTCAGCCGCACAAACAAGA +
Preference number: 4 (lower is better)
Translates to: EFCNHHCHMLILVHQYLAHHVAN*SAAQTR
Trigger: TCTTGTTTGTGCGGCTGACCAGTTGGCGACATGGTG...TGCCAAATACTGATGTACCAATATTAGCATGTGGCAATGATGATTGCAGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544267.5
CDS-3UTR CCA 90 bp TTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACAAGGCACATTACTTCTaGACCCTTTTTAGACCAGAG +
Preference number: 4 (lower is better)
Translates to: LQSVTTQHLLLPSVQFFHKAHYF*TLFRPE
Trigger: CTCTGGTCTAAAAAGGGTCCAGAAGTAATGTGCCTT...GTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGCAGAGGTTCTTAAATTaGGACACACAGAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGQRFLN*DTQRQV
Trigger: GACCTGCCTCTGTGTGTCCCAATTTAAGAACCTCTG...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCATGGGCAGGGCATTTTaGTCTTTGAGGTTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSMGRAF*SLRFKA
Trigger: AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCAT...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGGCCCATGTGTCAATGTaGGTAAAGATTCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGAHVSM*VKIPQL
Trigger: CAGCTGAGGAATCTTTACCCACATTGACACATGGGC...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 72 bp GGGCATACAAAAACTACCACTAATATTTTACAGTGCTaGCTTCATATCTGTCCATGTGTCCGTCACTCCACC +
Preference number: 4 (lower is better)
Translates to: GHTKTTTNILQC*LHICPCVRHST
Trigger: GGTGGAGTGACGGACACATGGACAGATATGAAGCAAGCACTGTAAAATATTAGTGGTAGTTTTTGTATGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TTACAAGCTGAGGCAAGCAGAGTCTTTGAACTGTTACAAGTAACACAAAATATTTCCACTGTATGCAATTaGCTCGGGCGGTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: LQAEASRVFELLQVTQNISTVCN*LGRCDH
Trigger: ATGGTCACACCGCCCGAGTCAATTGCATACAGTGGA...AATATTTTGTGTTACTTGTAACAGTTCAAAGACTCTGCTTGCCTCAGCTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540799.1
CDS-3UTR TCA 90 bp GGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATGGTCCTTCATGGCCTTaGAGATGCACTGCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: GFDLFLHSGSSHLFLELDGPSWP*RCTAFK
Trigger: TTTAAAAGCAGTGCATCTTCAAGGCCATGAAGGACC...ATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGACCATCAAAGTGTCCTaGAATGACAATCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMTIKVS*NDNLWS
Trigger: ACTCCAGAGATTGTCATTTCAGGACACTTTGATGGT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATATGCCAAGTCACCTGTaGTTGGTCTTTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GFDLFLHSGSSHLFLELDMPSHL*LVFSLP
Trigger: TGGAAGAGAAAAGACCAATCACAGGTGACTTGGCAT...ATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp TTCTTAGCTGCCTTACAAGCTGAGGCAAGCAGAGTCTTTGAACTGTTACAAGTAGGCAAGCAGAGTCTTTaGACTGTTACAAGTAACACA +
Preference number: 4 (lower is better)
Translates to: FLAALQAEASRVFELLQVGKQSL*TVTSNT
Trigger: TGTGTTACTTGTAACAGTTCAAAGACTCTGCTTGCC...TACTTGTAACAGTTCAAAGACTCTGCTTGCCTCAGCTTGTAAGGCAGCTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540799.1
CDS-3UTR TCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGTGGCTCGAACTCAGGTaGGATTGTATCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGWLELR*DCILLF
Trigger: AAAAAGCAGGATACAATCTCACCTGAGTTCGAGCCA...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATCAGTGTCTCGACTCCCAGTaGAGAAATACTTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: FDLFLHSGSSHLFLELDQCLDSQ*RNTCCQ
Trigger: CTGACAGCAAGTATTTCTTCACTGGGAGTCGAGACA...CTGATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR TCA 90 bp CAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTTGGAGCCATCTTCATTaGACTGGCAATCATAAAATC +
Preference number: 4 (lower is better)
Translates to: QLAKCNHSAPSASFCSVFWSHLH*TGNHKI
Trigger: GATTTTATGATTGCCAGTTCAATGAAGATGGCTCCA...AAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGGTGGCTAGTCTGAACTaGGATGGGCCCTATAAAATA +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGVASLN*DGPYKI
Trigger: TATTTTATAGGGCCCATCTCAGTTCAGACTAGCCAC...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAGAAAGAATTGTACAGTaGACACCCCTTAAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQERIVQ*TPLKEF
Trigger: AAACTCCTTAAGGGGTGTTCACTGTACAATTCTTTC...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAATTTTTCACACACAGTTaGATGGAAGCCAGACTCATA +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQFFTHS*MEARLI
Trigger: TATGAGTCTGGCTTCCATTCAACTGTGTGTGAAAAA...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GCCTTACAAGCTGAGGCAAGCAGAGTCTTTGAACTGTTACAAGTAACACAAAATAACCGTGCCCATATCTaGTTATCCTCTATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ALQAEASRVFELLQVTQNNRAHI*LSSISQ
Trigger: CTGGGAAATAGAGGATAATCAGATATGGGCACGGTT...ATTTTGTGTTACTTGTAACAGTTCAAAGACTCTGCTTGCCTCAGCTTGTAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540799.1
CDS-3UTR TCA 90 bp TTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACAAACTGGCTAGTTTTTaGACTTCAGGCCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: LQSVTTQHLLLPSVQFFHKLASF*TSGHKV
Trigger: TACTTTGTGGCCTGAAGTTCAAAAACTAGCCAGTTT...GTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR GCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCAATAATCTCACTGGCTaGTGTAGGACACCATCTTTG +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSNNLTG*CRTPSL
Trigger: CAAAGATGGTGTCCTACAGCAGCCAGTGAGATTATT...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TTCCAGGTATATAAGCAAATCTTTCCACACTCCAATCCTACTGCAACCACGTATACACTCCAATCCTACTaGAACCACGTATCGTTGAGA +
Preference number: 4 (lower is better)
Translates to: FQVYKQIFPHSNPTATTYTLQSY*NHVSLR
Trigger: TCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGT...ATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGATTTGCTTATATACCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR GCA 90 bp TCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTGTTCAGTTTTTCCACTaGAATTCTTCCAGCATAATT +
Preference number: 4 (lower is better)
Translates to: SSPQLAKCNHSAPSASFCVQFFH*NSSSII
Trigger: AATTATGCTGGAAGAATTGCAGTGGAAAAACTGAAC...ACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR GCA 90 bp GATCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTTTAAGTCCATTACAGTaGACATTTATTGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: DLHHSLQSVTTQHLLLPSLSPLQ*TFIDSV
Trigger: CACAGAGTCAATAAATGTGCACTGTAATGGACTTAA...AGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR GCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAAAACCTACAACTGCTTaGGAAACTCTACAATGTCTG +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQKPTTA*ETLQCL
Trigger: CAGACATTGTAGAGTTTCGCAAGCAGTTGTAGGTTT...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCACTGCATTGTCAATCTaGCAAATGGCTCTATGTTCC +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSTALSI*QMALCS
Trigger: GGAACATAGAGCCATTTGGCAGATTGACAATGCAGT...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAATACACACACAACACGTaGGTCACTACAGAAAACTTT +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQYTHNT*VTTENF
Trigger: AAAGTTTTCTGTAGTGACGCACGTGTTGTGTGTGTA...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGAAGATTCATCCATGTTaGAGCACATGTCAGCGTATC +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMKIHPC*STCQRI
Trigger: GATACGCTGACATGTGCTGCAACATGGATGAATCTT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAATAATGTTTGTGAAATaGTATGAGCCAGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQIMFVK*YEPDPP
Trigger: TGGAGGGTCTGGCTCATAGCATTTCACAAACATTAT...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGGACAGTGGCTCCTTCTaGAAGATCACTATCTTGATT +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMDSGSF*KITILI
Trigger: AATCAAGATAGTGATCTTCCAGAAGGAGCCACTGTC...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTTTGTCTTCCAGTGACTaGCTTACTTCACTTAGCATC +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSLSSSD*LTSLSI
Trigger: GATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAA...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCTCACACACAGTTGAATaGAAGCCAGACTCATACACT +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSSHTVE*KPDSYT
Trigger: AGTGTATGAGTCTGGCTTCCATTCAACTGTGTGTGA...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGTCTCTGCTGAGCACATaGGCATCTGCAATAAAGATT +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMSLLST*ASAIKI
Trigger: AATCTTTATTGCAGATGCCCATGTGCTCAGCAGAGA...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 72 bp TTTAATTCTCAGAACAATCCTACACACTGGTTACTGTaGTTCTCCCTTTCTTCCAGAATGAAGCACCCCAGT +
Preference number: 4 (lower is better)
Translates to: FNSQNNPTHWLL*FSLSSRMKHPS
Trigger: ACTGGGGTGCTTCATTCTGGAAGAAAGGGAGAACAACAGTAACCAGTGTGTAGGATTGTTCTGAGAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 72 bp ACCACCTTTTTGTCTCGACTCCCAGTGAAGAAATACTaGCTGTCAGGACTCCAATCACAAGACCAAATAATT +
Preference number: 4 (lower is better)
Translates to: TTFLSRLPVKKY*LSGLQSQDQII
Trigger: AATTATTTGGTCTTGTGATTGGAGTCCTGACAGCAAGTATTTCTTCACTGGGAGTCGAGACAAAAAGGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR TCA 90 bp TTACAAGCTGAGGCAAGCAGAGTCTTTGAACTGTTACAAGTAACACAAAATATTTTGACTCGGGCGGTGTaGCCATTCAAGTTGGTAACA +
Preference number: 4 (lower is better)
Translates to: LQAEASRVFELLQVTQNILTRAV*PFKLVT
Trigger: TGTTACCAACTTGAATGGTCACACCGCCCGAGTCAA...AATATTTTGTGTTACTTGTAACAGTTCAAAGACTCTGCTTGCCTCAGCTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540799.1
CDS-3UTR TCA 90 bp CAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTACTGCTTTTAAAAGCTaGTTATCCTCTATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QLAKCNHSAPSASFCSVFTAFKS*LSSISQ
Trigger: CTGGGAAATAGAGGATAATCAGCTTTTAAAAGCAGT...AAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp TTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATCAGGAGCACATGATTCAGTaGTTGTCCTGTAATGGCACA +
Preference number: 4 (lower is better)
Translates to: FDLFLHSGSSHLFLELDQEHMIQ*LSCNGT
Trigger: TGTGCCATTACAGGACAATCACTGAATCATGTGCTC...CTGATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGGGCAAGCAGAGTCTTTaGACTGTTACAAGTAACACA +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGGKQSL*TVTSNT
Trigger: TGTGTTACTTGTAACAGTTCAAAGACTCTGCTTGCC...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTACAGTGCACATTTATTaGCTCTGTGTATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSTVHIY*LCVSSQ
Trigger: CTGTGAAGATACACAGAGTCAATAAATGTGCACTGT...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCCACTTACCTGTTTTCTaGCCCTATAATTTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSHLPVF*PYNFVG
Trigger: CCCTACAAAATTATAGGGTCAGAAAACAGGTAAGTG...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGAAAATTAGAATAGTATaGCCACCCCAACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEKIRIV*PPQHCP
Trigger: TGGGCAGTGTTGGGGTGGTCATACTATTCTAATTTT...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTATTTCCCTATTCCACTaGGCAGGAAGAGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: CFLNIIKYPARVQICFVPISLFH*AGRGCL
Trigger: AAGGCAGCCTCTTCCTGCTCAGTGGAATAGGGAAAT...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGAGGTTGCCAGTGAACTaGATTTACCCAGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: VEWKPDSYTNLISTFRDERLPVN*IYPVFM
Trigger: CATGAAAACTGGGTAAATGCAGTTCACTGGCAACCT...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCAGAATGATAGCTGCATaGTCTTTCTTAGCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSRMIAA*SFLAAL
Trigger: TAAGGCAGCTAAGAAAGAGCATGCAGCTATCATTCT...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGCAAGTCACCTGTGATTaGTCTTTTCTCTTCCATGGA +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGQVTCD*SFLFHG
Trigger: TCCATGGAAGAGAAAAGACCAATCACAGGTGACTTG...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGAAGGCACATTACTTCTaGACCCTTTTTAGACCAGAG +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGKAHYF*TLFRPE
Trigger: CTCTGGTCTAAAAAGGGTCCAGAAGTAATGTGCCTT...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCAAACTCTACAATGTCTaGCAGATGCTAGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSKLYNV*QMLERR
Trigger: CCTTCTTTCTAGCATCTGCCAGACATTGTAGAGTTT...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTTCCTCCCCCAGTCCTTaGCAACTACCATTCTACTTG +
Preference number: 4 (lower is better)
Translates to: CFLNIIKYPARVQICFVPSSPSP*QLPFYL
Trigger: CAAGTAGAATGGTAGTTGCCAAGGACTGGGGGAGGA...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCGTTCATACATTGCACTaGATTCACACGTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSVHTLH*IHTSQV
Trigger: TACTTGAGACGTGTGAATCCAGTGCAATGTATGAAC...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGAACAATCCTACACACTaGTTACTGTTGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMNNPTH*LLLFSL
Trigger: AAGGGAGAACAACAGTAACCAGTGTGTAGGATTGTT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCATGTTATCGTCATCCTaGGTTTCTAAAGATGTTGAC +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSMLSSS*VSKDVD
Trigger: GTCAACATCTTTAGAAACTCAGGATGACGATAACAT...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGGAAGCTATATCTCCCTaGAAGACAGCTTTATTTGAT +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMEAISP*KTALFD
Trigger: ATCAAATAAAGCTGTCTTTCAGGGAGATATAGCTTC...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATACAGTGCACATTTATTaGCTCTGTGTATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GFDLFLHSGSSHLFLELDTVHIY*LCVSSQ
Trigger: CTGTGAAGATACACAGAGTCAATAAATGTGCACTGT...ATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR TCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGTGGAGCCATCTTCATTaGACTGGCAATCATAAAATC +
Preference number: 4 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEWSHLH*TGNHKI
Trigger: GATTTTATGATTGCCAGTTCAATGAAGATGGCTCCA...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGTTTTCCAAGTCATTTTaGACTGCCGTAGCAATGAGT +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGFSKSF*TAVAMS
Trigger: ACTCATTGCTACGGCAGTTCAAAATGACTTGGAAAA...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTCTTCCTTTTAGAGGCTaGATAATATTCCACTGTATG +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSLPFRG*IIFHCM
Trigger: CATACAGTGGAATATTATTCAGCCTCTAAAAGGAAG...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGAAGGCTTTGGGACTCTaGAGTATAATGTTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMKALGL*SIMFVK
Trigger: TTTCACAAACATTATACTTCAGAGTCCCAAAGCCTT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TTCCAGGTATATAAGCAAATCTTTCCACACTCCAATCCTACTGCAACCACGTATTTCTACGAACTCAGGTaGGATTGTATCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: FQVYKQIFPHSNPTATTYFYELR*DCILLF
Trigger: AAAAAGCAGGATACAATCTCACCTGAGTTCGTAGAA...ATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGATTTGCTTATATACCTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp CATGCACCGCATAAACAGGTCCTTCATGGCCTTGAAGATGCACTGCTTTTAAAATTCTGCAATCATCATTaGCACATGCTAATATTGGTA +
Preference number: 4 (lower is better)
Translates to: HAPHKQVLHGLEDALLLKFCNHH*HMLILV
Trigger: TACCAATATTAGCATGTGGCAATGATGATTGCAGAA...TTTTAAAAGCAGTGCATCTTCAAGGCCATGAAGGACCTGTTTATGCGGTGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR GCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAGTTCAGTTTTTCCACTaGAATTCTTCCAGCATAATT +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQVQFFH*NSSSII
Trigger: AATTATGCTGGAAGAATTGCAGTGGAAAAACTGAAC...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTACATATGAATTACAATaGAGACTGCCCAGATGTGTA +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSTYELQ*RLPRCV
Trigger: TACACATCTGGGCAGTCTGCATTGTAATTCATATGT...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAATTACATCCTGGGAAATaGTGTTTACCATGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQLHPGK*CLPCFK
Trigger: TTTAAAGCATGGTAAACACCATTTCCCAGGATGTAA...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGTACCGATTTACATCCTaGGAAATGGTGTTTACCATG +
Preference number: 4 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEYRFTS*EMVFTM
Trigger: CATGGTAAACACCATTTCCCAGGATGTAAATCGGTA...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGACTGCTTTTAAAAGCTaGTTATCCTCTATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VEWKPDSYTNLISTFRDETAFKS*LSSISQ
Trigger: CTGGGAAATAGAGGATAATCAGCTTTTAAAAGCAGT...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp CAATCATCATTGCCACATGCTAATATTGGTACTTCTGGACCCTTTTTAGACCAGACTGCTTTTAAAAGCTaGTTATCCTCTATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QSSLPHANIGTSGPFLDQTAFKS*LSSISQ
Trigger: CTGGGAAATAGAGGATAATCAGCTTTTAAAAGCAGT...CTGGTCTAAAAAGGGTCCAGAAGTACCAATATTAGCATGTGGCAATGATGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545632.5
CDS-3UTR TCA 90 bp TTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATCAGTGCCCATATAGTTTTTaGACTTCAGGCCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: FDLFLHSGSSHLFLELDQCPYSF*TSGHKV
Trigger: TACTTTGTGGCCTGAAGTTCAAAAACTATATGGGCA...CTGATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR TCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGAGGTCTAGGAATCTCTaGACATATGTGCAAAATTCT +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGRSRNL*TYVQNS
Trigger: AGAATTTTGCACATATGTTCAGAGATTCCTAGACCT...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTTTCTGCAATCATCATTaGCACATGCTAATATTGGTA +
Preference number: 4 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSFCNHH*HMLILV
Trigger: TACCAATATTAGCATGTGGCAATGATGATTGCAGAA...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TTTGGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTAGAATGATAGCTGCATaGTCTTTCTTAGCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: FGFDLFLHSGSSHLFLELRMIAA*SFLAAL
Trigger: TAAGGCAGCTAAGAAAGAGCATGCAGCTATCATTCT...AAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCTTAAGTCCATTACAGTaGACATTTATTGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: STKNTKISRNWWCASSPSLSPLQ*TFIDSV
Trigger: CACAGAGTCAATAAATGTGCACTGTAATGGACTTAA...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358232.11
ENST00000540766.5
CDS-3UTR GCA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGATCTCTGAACATATGTaGAAAATTCTGGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMISEHM*KILGMC
Trigger: ACACATACCCAGAATTTTGCACATATGTTCAGAGAT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGGTCTTTTCTCTTCCATaGAGCAAAAAGTCTAGTTGT +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGVFSLP*SKKSSC
Trigger: ACAACTAGACTTTTTGCTCCATGGAAGAGAAAAGAC...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CCA 90 bp TTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATCAGTGGAGTCCACTCTCTTaGGTTAACTGTATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FDLFLHSGSSHLFLELDQWSPLS*VNCILF
Trigger: AAACAGAATACAGTTAACCCAAGAGAGTGGACTCCA...CTGATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CCA 90 bp AGAGAGCCAAAGCAAATCCATTTCCAAAGTTTAAAGTCTGAAGGCACATTACTTAAGGCACATTACTTCTaGACCCTTTTTAGACCAGAG +
Preference number: 4 (lower is better)
Translates to: REPKQIHFQSLKSEGTLLKAHYF*TLFRPE
Trigger: CTCTGGTCTAAAAAGGGTCCAGAAGTAATGTGCCTT...AAGTAATGTGCCTTCAGACTTTAAACTTTGGAAATGGATTTGCTTTGGCTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR CCA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGAATAAAAGAAATGACTaGCTGCAGCTCAAACCTACA +
Preference number: 4 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGNKRND*LQLKPT
Trigger: TGTAGGTTTGAGCTGCAGCCAGTCATTTCTTTTATT...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 72 bp CTTTCAACACATTTATTATATACAGCTGTCACTGCATaGTCAATCTGCCAAATGGCTCTATGTTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: LSTHLLYTAVTA*SICQMALCSNR
Trigger: CCTGTTGGAACATAGAGCCATTTGGCAGATTGACAATGCAGTGACAGCTGTATATAATAAATGTGTTGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATCAGATGTTATCGTCATCCTaGGTTTCTAAAGATGTTGAC +
Preference number: 4 (lower is better)
Translates to: FDLFLHSGSSHLFLELDQMLSSS*VSKDVD
Trigger: GTCAACATCTTTAGAAACTCAGGATGACGATAACAT...CTGATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
3UTR CAA 72 bp TCCTTGGCAACTACCATTCTACTTGTTTCTATGCATTaGACTGCTCTAGATACTTCACATAAATGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SLATTILLVSMH*TALDTSHKWKH
Trigger: ATGCTTCCATTTATGTGAAGTATCTAGAGCAGTCAAATGCATAGAAACAAGTAGAATGGTAGTTGCCAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATCAGTTCTGCAATCATCATTaGCACATGCTAATATTGGTA +
Preference number: 4 (lower is better)
Translates to: FDLFLHSGSSHLFLELDQFCNHH*HMLILV
Trigger: TACCAATATTAGCATGTGGCAATGATGATTGCAGAA...CTGATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR GCA 90 bp CCAAAGCAAATCCATTTCCAAAGTTTAAAGTCTGAAGGCACATTACTTCTGGACTTCTGCAATCATCATTaGCACATGCTAATATTGGTA +
Preference number: 4 (lower is better)
Translates to: PKQIHFQSLKSEGTLLLDFCNHH*HMLILV
Trigger: TACCAATATTAGCATGTGGCAATGATGATTGCAGAA...GTCCAGAAGTAATGTGCCTTCAGACTTTAAACTTTGGAAATGGATTTGCTTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR CCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTTGGAGTCCACTCTCTTaGGTTAACTGTATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: CFLNIIKYPARVQICFVPWSPLS*VNCILF
Trigger: AAACAGAATACAGTTAACCCAAGAGAGTGGACTCCA...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR TCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTAAAAGTCTAGTTGTCTaGTCAGTACCAACAGTGATA +
Preference number: 4 (lower is better)
Translates to: CFLNIIKYPARVQICFVPKSLVV*SVPTVI
Trigger: TATCACTGTTGGTACTGATCAGACAACTAGACTTTT...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
3UTR CAA 72 bp ATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTaGTCCCTTAAGCACATTTTTACAAGATTGATTGGC +
Preference number: 4 (lower is better)
Translates to: ISSNIQPEFKFA*SLKHIFTRLIG
Trigger: GCCAATCAATCTTGTAAAAATGTGCTTAAGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR GCA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTATATTTTACAGTGCTTaGTTCATATCTGTCCATGTG +
Preference number: 4 (lower is better)
Translates to: CFLNIIKYPARVQICFVPIFYSA*FISVHV
Trigger: CACATGGACAGATATGAAGCAAGCACTGTAAAATAT...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS CCA 90 bp CATAGAGCACCACGGAGCAGGACGTGCCAAAGGCCAGAAGTCCTCTaGGCCCAGAGCTCCAGTTCAGGACTCCCCGCACCCGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: HRAPRSRTCQRPEVL*AQSSSSGLPAPGLG
Trigger: GCCCAAACCGGGTGCGGGGAGTCCTGAACTGGAGCTCTGGGCCCAGAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGGTGCTCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535488.5
ENST00000539560.5
ENST00000540135.5
ENST00000540799.1
ENST00000541190.5
ENST00000542430.5
ENST00000542824.5
ENST00000544267.5
ENST00000545632.5
CDS CCA 90 bp TCCTCTGGGCCCAGAGCTCCAGTTCAGGACTCCCCGCACCCGGTTTaGGCAGCAAAACACGTGAGAAGTCTCCAGCACGGGTGCCACCAT +
Preference number: 5 (lower is better)
Translates to: SSGPRAPVQDSPHPV*AAKHVRSLQHGCHH
Trigger: ATGGTGGCACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAGTCCTGAACTGGAGCTCTGGGCCCAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535488.5
ENST00000539560.5
ENST00000540135.5
ENST00000540799.1
ENST00000541190.5
ENST00000542430.5
ENST00000542824.5
ENST00000544267.5
ENST00000545632.5
CDS CCA 90 bp AACCATAGAGTCGCAGCTCCTGCTACAGAGGGCGAGAGAGGCTGGTaGCTTCCAGGCCCTGCCTCGTTCCACCTGGCCAGTCTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: NHRVAAPATEGERGW*LPGPASFHLASLPG
Trigger: ACCTGGAAGACTGGCCAGGTGGAACGAGGCAGGGCCTGGAAGCCACCAGCCTCTCTCGCCCTCTGTAGCAGGAGCTGCGACTCTATGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350494.10
ENST00000442325.6
ENST00000540730.5
CDS TCA 90 bp CTCCAGTTCAGGACTCCCCGCACCCGGTTTGGGCAGCAAAACACGTaGGAAGTCTCCAGCACGGGTGCCACCATGTCGCCAACTGGTCAG +
Preference number: 5 (lower is better)
Translates to: LQFRTPRTRFGQQNT*EVSSTGATMSPTGQ
Trigger: CTGACCAGTTGGCGACATGGTGGCACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAGTCCTGAACTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535488.5
ENST00000539560.5
ENST00000540135.5
ENST00000541190.5
ENST00000542430.5
ENST00000544267.5
ENST00000545632.5
CDS GCA 90 bp TCAGTAGAAGGGGCAGGGGGTCATAGAGCACCACGGAGCAGGACGTaGCAAAGGCCAGAAGTCCTCTGGGCCCAGAGCTCCAGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: SVEGAGGHRAPRSRT*QRPEVLWAQSSSSG
Trigger: TCCTGAACTGGAGCTCTGGGCCCAGAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGGTGCTCTATGACCCCCTGCCCCTTCTACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS CCA 90 bp AAACACGTGAGAAGTCTCCAGCACGGGTGCCACCATGTCGCCAACTaGTCAGCCGCACAAACAAGAGACGCGCACTTCCGCCCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: KHVRSLQHGCHHVAN*SAAQTRDAHFRPRS
Trigger: GCTCCGAGGGCGGAAGTGCGCGTCTCTTGTTTGTGCGGCTGACCAGTTGGCGACATGGTGGCACCCGTGCTGGAGACTTCTCACGTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544267.5
CDS GCA 90 bp CACCCGGTTTGGGCAGCAAAACACGTGAGAAGTCTCCAGCACGGGTaGCACCATGTCGCCAACTGGTCAGCCGCACAAACAAGAGACGCG +
Preference number: 5 (lower is better)
Translates to: HPVWAAKHVRSLQHG*HHVANWSAAQTRDA
Trigger: CGCGTCTCTTGTTTGTGCGGCTGACCAGTTGGCGACATGGTGGCACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCCAAACCGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351393.10
ENST00000442325.6
ENST00000541190.5
ENST00000544267.5
ENST00000545632.5
CDS GCA 90 bp CAACAACCCTTTTCAGGGGGTCATAGAGCACCACGGAGCAGGACGTaGCAAAGGCCAGAAGTCCTCTGGGCCCAGAGCTCCAGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: QQPFSGGHRAPRSRT*QRPEVLWAQSSSSG
Trigger: TCCTGAACTGGAGCTCTGGGCCCAGAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGGTGCTCTATGACCCCCTGAAAAGGGTTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535488.5
ENST00000539560.5
ENST00000540135.5
ENST00000540799.1
ENST00000541190.5
ENST00000542430.5
ENST00000542824.5
CDS-3UTR CAA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAACTCCCCGCACCCGGTTaGGGCAGCAAAACACGTGAG +
Preference number: 5 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKLPAPG*GSKTRE
Trigger: CTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAG...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS TCA 90 bp CAGCTTCTCCTTCCACAGAGCCTTGCACAGAATGGAAGCGTAACATaGAACCATAGAGTCGCAGCTCCTGCTACAGAGGGCGAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: QLLLPQSLAQNGSVT*NHRVAAPATEGERG
Trigger: GCCTCTCTCGCCCTCTGTAGCAGGAGCTGCGACTCTATGGTTTCATGTTACGCTTCCATTCTGTGCAAGGCTCTGTGGAAGGAGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350494.10
ENST00000442325.6
ENST00000540730.5
CDS-3UTR CAA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACCCTGAGACGAGGAGTTaGAGACCCGCCTGGCCAACG +
Preference number: 5 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNPETRS*RPAWPT
Trigger: CGTTGGCCAGGCGGGTCTCAAACTCCTCGTCTCAGG...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TGCCCATTCCACTCCTCTAATCCAATCCTCATGTCCACAGAGAGAAAGCACTTTCTCCCCGCACCCGGTTaGGGCAGCAAAACACGTGAG +
Preference number: 5 (lower is better)
Translates to: CPFHSSNPILMSTERKHFLPAPG*GSKTRE
Trigger: CTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAG...AAAGTGCTTTCTCTCTGTGGACATGAGGATTGGATTAGAGGAGTGGAATGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000545632.5
CDS-3UTR CAA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGACTGATGGGCACATATaGCTTCCATCTCTTAGCTAC +
Preference number: 5 (lower is better)
Translates to: STPVGASRTQHGLSPSLWTDGHI*LPSLSY
Trigger: GTAGCTAAGAGATGGAAGCAATATGTGCCCATCAGT...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAAGTTGGGGAGGGCAGCTaGTTACATGGACATCAGGGC +
Preference number: 5 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKVGEGS*LHGHQG
Trigger: GCCCTGATGTCCATGTAACAAGCTGCCCTCCCCAAC...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS CCA 90 bp GGACTGAGGAGCAGGGGCCAATGTTGTGCTCAATACAGTCATCAGTaGAGTCGCACTCACCCCAGACAACCACCTAATACAGACAGATCA +
Preference number: 5 (lower is better)
Translates to: GLRSRGQCCAQYSHQ*SRTHPRQPPNTDRS
Trigger: TGATCTGTCTGTATTAGGTGGTTGTCTGGGGTGAGTGCGACTCCACTGATGACTGTATTGAGCACAACATTGGCCCCTGCTCCTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536830.1
CDS-3UTR CAA 90 bp GGAGCAGGGGCCAATGTTGTGCTCAATACAGTCATCAGTGGAGTCGCACTCACCGATCTTCACCACAGCTaGCAAAGTGTAACCACTCAG +
Preference number: 5 (lower is better)
Translates to: GAGANVVLNTVISGVALTDLHHS*QSVTTQ
Trigger: CTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGATC...GGTGAGTGCGACTCCACTGATGACTGTATTGAGCACAACATTGGCCCCTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR CAA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACCTGCAAGAGCAGCCTTaGTGGAGCTGTCCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNLQEQP*WSCPFH
Trigger: GTGGAAGGGACAGCTCCACAAAGGCTGCTCTTGCAG...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TTAGCTGCCTTACAAGCTGAGGCAAGCAGAGTCTTTGAACTGTTACAAGTAACACTCCCCGCACCCGGTTaGGGCAGCAAAACACGTGAG +
Preference number: 5 (lower is better)
Translates to: LAALQAEASRVFELLQVTLPAPG*GSKTRE
Trigger: CTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAG...TGTTACTTGTAACAGTTCAAAGACTCTGCTTGCCTCAGCTTGTAAGGCAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540799.1
CDS-3UTR CAA 90 bp GATCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTTGCAACCACGTATCGTaGAGAAGGGTGGAGCACTGG +
Preference number: 5 (lower is better)
Translates to: DLHHSLQSVTTQHLLLPSCNHVS*RRVEHW
Trigger: CCAGTGCTCCACCCTTCTCAACGATACGTGGTTGCA...AGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CAA 90 bp TCAATACAGTCATCAGTGGAGTCGCACTCACCCCAGACAACCACCTTTTTGTCTTGCAACCACGTATCGTaGAGAAGGGTGGAGCACTGG +
Preference number: 5 (lower is better)
Translates to: SIQSSVESHSPQTTTFLSCNHVS*RRVEHW
Trigger: CCAGTGCTCCACCCTTCTCAACGATACGTGGTTGCA...AGACAAAAAGGTGGTTGTCTGGGGTGAGTGCGACTCCACTGATGACTGTATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR CAA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAACTCCTCCCCCAGTCCTaGGCAACTACCATTCTACTT +
Preference number: 5 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKLLPQS*ATTILL
Trigger: AAGTAGAATGGTAGTTGCCAAGGACTGGGGGAGGAG...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TCCACCCCAGTAGGAGCTTCTCGGACACAGCATGGCCTCTCTCCTTCACTCTGGCCTCTTGTAATGTATTaGTTGAAGAATCTAGGTCCC +
Preference number: 5 (lower is better)
Translates to: STPVGASRTQHGLSPSLWPLVMY*LKNLGP
Trigger: GGGACCTAGATTCTTCAACAAATACATTACAAGAGG...CCAGAGTGAAGGAGAGAGGCCATGCTGTGTCCGAGAAGCTCCTACTGGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TTCCAGGTATATAAGCAAATCTTTCCACACTCCAATCCTACTGCAACCACGTATCTCCCCGCACCCGGTTaGGGCAGCAAAACACGTGAG +
Preference number: 5 (lower is better)
Translates to: FQVYKQIFPHSNPTATTYLPAPG*GSKTRE
Trigger: CTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAG...ATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGATTTGCTTATATACCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CAA 90 bp CTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACGACTTTGGCTTTGACTaGTTTCTACACAGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: LSTLQSYCNHVSLRRVEHDFGFD*FLHSGS
Trigger: GGACCCACTGTGTAGAAACAAGTCAAAGCCAAAGTC...GTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CAA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAACTAGGCAAGGCCTACTaGCAGATAACCTTGGGAGTT +
Preference number: 5 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKLGKAY*QITLGV
Trigger: AACTCCCAAGGTTATCTGCAAGTAGGCCTTGCCTAG...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAACTGGCCTCAGCCTCATaGTCCTTGGAGTGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQLASAS*SLECQS
Trigger: AGACTGGCACTCCAAGGACAATGAGGCTGAGGCCAG...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS TCA 90 bp CTGGATCCCAGACTAGGTCTTGGACACCATCAAAGTGTCCTGAAATaGCAATCTCTGGAGTCCACTCTCTCTGTTCTAGCCAAACTCCTG +
Preference number: 5 (lower is better)
Translates to: LDPRLGLGHHQSVLK*QSLESTLSVLAKLL
Trigger: CAGGAGTTTGGCTAGAACAGAGAGAGTGGACTCCAGAGATTGTCATTTCAGGACACTTTGATGGTGTCCAAGACCTAGTCTGGGATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350494.10
ENST00000542824.5
CDS-3UTR CAA 90 bp AAGATAAGCAGAGAGCCAAAGCAAATCCATTTCCAAAGTTTAAAGTCTGAAGGCCTCCCCGCACCCGGTTaGGGCAGCAAAACACGTGAG +
Preference number: 5 (lower is better)
Translates to: KISREPKQIHFQSLKSEGLPAPG*GSKTRE
Trigger: CTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAG...GCCTTCAGACTTTAAACTTTGGAAATGGATTTGCTTTGGCTCTCTGCTTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR CAA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAAGATCTTCACCACAGCTaGCAAAGTGTAACCACTCAG +
Preference number: 5 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKDLHHS*QSVTTQ
Trigger: CTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGATC...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TTTGGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTCCTGAGACGAGGAGTTaGAGACCCGCCTGGCCAACG +
Preference number: 5 (lower is better)
Translates to: FGFDLFLHSGSSHLFLELPETRS*RPAWPT
Trigger: CGTTGGCCAGGCGGGTCTCAAACTCCTCGTCTCAGG...AAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR CAA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTTGGAGTGCCAGTCTCTaGTTTAAGCATGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: QLISRKMGRAFWSLRFKAWSASL*FKHGRA
Trigger: GGCTCTGCCATGCTTAAACAAGAGACTGGCACTCCA...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAACTGTTGCCCAACTCATaGGGGTTCCAACCCTCACCT +
Preference number: 5 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQLLPNS*GFQPSP
Trigger: AGGTGAGGGTTGGAACCCCAATGAGTTGGGCAACAG...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp CTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACTTCCCAGTGAATCACTaGATTATCAGATCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LSTLQSYCNHVSLRRVEHFPVNH*IIRSSR
Trigger: TCTGGAGGATCTGATAATCAAGTGATTCACTGGGAA...GTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CAA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTCAGACAACCACCTTTTaGTCTCGACTCCCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: QLISRKMGRAFWSLRFKAQTTTF*SRLPVK
Trigger: CTTCACTGGGAGTCGAGACAAAAAGGTGGTTGTCTG...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp CACCTTTTTGTCTCGACTCCCAGTGAAGAAATACTTGCTGTCAGGACTCCAATCCAGACAACCACCTTTTaGTCTCGACTCCCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: HLFVSTPSEEILAVRTPIQTTTF*SRLPVK
Trigger: CTTCACTGGGAGTCGAGACAAAAAGGTGGTTGTCTG...GATTGGAGTCCTGACAGCAAGTATTTCTTCACTGGGAGTCGAGACAAAAAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR CAA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTGAGCAGGGGCCAATGTaGTGCTCAATACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: QLISRKMGRAFWSLRFKAEQGPM*CSIQSS
Trigger: TGATGACTGTATTGAGCACAACATTGGCCCCTGCTC...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp CAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACTGCGAGCAGGGGCCAATGTaGTGCTCAATACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: QSVTTQHLLLPSVQFFHCEQGPM*CSIQSS
Trigger: TGATGACTGTATTGAGCACAACATTGGCCCCTGCTC...GCAGTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CAA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTTGCAACCACGTATCGTaGAGAAGGGTGGAGCACTGG +
Preference number: 5 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSCNHVS*RRVEHW
Trigger: CCAGTGCTCCACCCTTCTCAACGATACGTGGTTGCA...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp CACCTTTTTGTCTCGACTCCCAGTGAAGAAATACTTGCTGTCAGGACTCCAATCAAGAAAGAGAATCGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: HLFVSTPSEEILAVRTPIKKENR*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCGATTCTCTTTCTT...GATTGGAGTCCTGACAGCAAGTATTTCTTCACTGGGAGTCGAGACAAAAAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR CAA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACACAGAGGTTCTTAAATaGGGACACACAGAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNTEVLK*GHTEAG
Trigger: ACCTGCCTCTGTGTGTCCCAATTTAAGAACCTCTGT...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGGAAGCCTGCATGCACTaGGGTCAGAACAAGCCCATG +
Preference number: 5 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMEACMH*GQNKPM
Trigger: CATGGGCTTGTTCTGACCCAAGTGCATGCAGGCTTC...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGCACGGACTGCCACTTTaGCCATCCTGCTCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGHGLPL*PSCSEQ
Trigger: CTGCTCTGAGCAGGATGGCAAAAGTGGCAGTCCGTG...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp CTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACAATCTTGTGAACAGCTaGCTAGGAAAAGATCTCTAC +
Preference number: 5 (lower is better)
Translates to: LSTLQSYCNHVSLRRVEHNLVNS*LGKDLY
Trigger: GTAGAGATCTTTTCCTAGCAAGCTGTTCACAAGATT...GTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CAA 90 bp TCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTCCAGTGAAGAAATACTaGCTGTCAGGACTCCAATCA +
Preference number: 5 (lower is better)
Translates to: SSPQLAKCNHSAPSASFCPVKKY*LSGLQS
Trigger: TGATTGGAGTCCTGACAGCAAGTATTTCTTCACTGG...ACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CAA 90 bp TCAATACAGTCATCAGTGGAGTCGCACTCACCCCAGACAACCACCTTTTTGTCTCCAGTGAAGAAATACTaGCTGTCAGGACTCCAATCA +
Preference number: 5 (lower is better)
Translates to: SIQSSVESHSPQTTTFLSPVKKY*LSGLQS
Trigger: TGATTGGAGTCCTGACAGCAAGTATTTCTTCACTGG...AGACAAAAAGGTGGTTGTCTGGGGTGAGTGCGACTCCACTGATGACTGTATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR CAA 90 bp TTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACCAGACAACCACCTTTTaGTCTCGACTCCCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: LQSVTTQHLLLPSVQFFHQTTTF*SRLPVK
Trigger: CTTCACTGGGAGTCGAGACAAAAAGGTGGTTGTCTG...GTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CAA 90 bp TTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACGAGCAGGGGCCAATGTaGTGCTCAATACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: LQSVTTQHLLLPSVQFFHEQGPM*CSIQSS
Trigger: TGATGACTGTATTGAGCACAACATTGGCCCCTGCTC...GTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CAA 90 bp CAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACTGCGACTTTGGCTTTGACTaGTTTCTACACAGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: QSVTTQHLLLPSVQFFHCDFGFD*FLHSGS
Trigger: GGACCCACTGTGTAGAAACAAGTCAAAGCCAAAGTC...GCAGTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CAA 90 bp CTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCACTGCCACATGCTAATATaGGTACATCAGTATTTGGCA +
Preference number: 5 (lower is better)
Translates to: LSTLQSYCNHVSLRRVEHCHMLI*VHQYLA
Trigger: TGCCAAATACTGATGTACCAATATTAGCATGTGGCA...GTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CAA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAAGAGTGTACAGTTGAGTaGGCATACAGCATTCACATA +
Preference number: 5 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKECTVE*AYSIHI
Trigger: TATGTGAATGCTGTATGCCAACTCAACTGTACACTC...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAATGCCTTCTTCCTCTTaGCTGGCTGGAACGCAAAGA +
Preference number: 5 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQMPSSS*LAGTQR
Trigger: TCTTTGCGTTCCAGCCAGCAAAGAGGAAGAAGGCAT...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTCATGTATCTGAGGCCTaGCAATTTCATGCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: QLISRKMGRAFWSLRFKAHVSEA*QFHAKS
Trigger: TGACTTGGCATGAAATTGCAAGGCCTCAGATACATG...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTCGAACTCAGGTGAGATaGTATCCTGCTTTTTCCACA +
Preference number: 5 (lower is better)
Translates to: QLISRKMGRAFWSLRFKARTQVR*YPAFST
Trigger: TGTGGAAAAAGCAGGATACAATCTCACCTGAGTTCG...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp CACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTGTATGACTTTGGCTTaGACTTGTTTCTACACAGTG +
Preference number: 5 (lower is better)
Translates to: HHSLQSVTTQHLLLPSVQCMTLA*TCFYTV
Trigger: CACTGTGTAGAAACAAGTCAAAGCCAAAGTCATACA...CTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CAA 90 bp GATCTTCACCACAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTAGCCAGTGTATGACTTaGGCTTTGACTTGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: DLHHSLQSVTTQHLLLPSSQCMT*ALTCFY
Trigger: GTAGAAACAAGTCAAAGCCAAAGTCATACACTGGCT...AGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CAA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGAAGAAAGAGAATCGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMKKENR*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCGATTCTCTTTCTT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGCAGATGCTCACTGCCTaGGTATACACGCACACACAC +
Preference number: 5 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGQMLTA*VYTHTH
Trigger: GTGTGTGTGCGTGTATACCAAGGCAGTGAGCATCTG...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACAGCCAGAGTTCAAATTaGCTTTGTCCCTTAAGCACA +
Preference number: 5 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNSQSSN*LCPLST
Trigger: TGTGCTTAAGGGACAAAGCAAATTTGAACTCTGGCT...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGTCAGCCTCATTGTCCTaGGAGTGCCAGTCTCTTGTT +
Preference number: 5 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMSASLS*ECQSLV
Trigger: AACAAGAGACTGGCACTCCAAGGACAATGAGGCTGA...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS GCA 90 bp TCCCAATCAGAAGCTGTTTTACCGAACTCAGGTGAGATTGTATCCTaGTTTTTCCACAATGACCAGGTTCGATCTCTGGAAACAGCTAGT +
Preference number: 5 (lower is better)
Translates to: SQSEAVLPNSGEIVS*FFHNDQVRSLETAS
Trigger: ACTAGCTGTTTCCAGAGATCGAACCTGGTCATTGTGGAAAAAGCAGGATACAATCTCACCTGAGTTCGGTAAAACAGCTTCTGATTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541294.1
CDS CCA 90 bp GTTCTAGCCAAACTCCTGACTCTTCATCTGGAGCCCAGAGAATCATaGTTTTATCCATGGAAGCAGATAATAATCTCACTGGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: VLAKLLTLHLEPRES*FYPWKQIIISLAAV
Trigger: TACAGCAGCCAGTGAGATTATTATCTGCTTCCATGGATAAAACCATGATTCTCTGGGCTCCAGATGAAGAGTCAGGAGTTTGGCTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535093.1
ENST00000539560.5
ENST00000542824.5
CDS CCA 90 bp CCAACAGTGATAATAAATTCTCCTTCTGGATCCCAGACTAGGTCTTaGACACCATCAAAGTGTCCTGAAATGACAATCTCTGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: PTVIINSPSGSQTRS*TPSKCPEMTISGVH
Trigger: GTGGACTCCAGAGATTGTCATTTCAGGACACTTTGATGGTGTCCAAGACCTAGTCTGGGATCCAGAAGGAGAATTTATTATCACTGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000542824.5
CDS-3UTR CAA 90 bp AGGCACATTACTTCTGGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCATTCCCAGTGAATCACTaGATTATCAGATCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RHITSGPFLDQSRTAESAFPVNH*IIRSSR
Trigger: TCTGGAGGATCTGATAATCAAGTGATTCACTGGGAA...TGCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGAAGTAATGTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR CAA 90 bp TCTTTCCACACTCCAATCCTACTGCAACCACGTATCGTTGAGAAGGGTGGAGCAATTCTGCAATCATCATaGCCACATGCTAATATTGGT +
Preference number: 5 (lower is better)
Translates to: SFHTPILLQPRIVEKGGAILQSS*PHANIG
Trigger: ACCAATATTAGCATGTGGCAATGATGATTGCAGAAT...TGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CAA 90 bp CAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCATGTATCTGAGGCCTaGCAATTTCATGCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: QLAKCNHSAPSASFCSVFHVSEA*QFHAKS
Trigger: TGACTTGGCATGAAATTGCAAGGCCTCAGATACATG...AAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CAA 90 bp GGGACACACAGAGGCAGGTCTGCAGGTCTAGGAATCTCTGAACATATGTGCAAATGCACAGAAGTAATTTaGTTGGTGAAGGCAAAAAGA +
Preference number: 5 (lower is better)
Translates to: GTHRGRSAGLGISEHMCKCTEVI*LVKAKR
Trigger: TCTTTTTGCCTTCACCAACAAAATTACTTCTGTGCA...TTTGCACATATGTTCAGAGATTCCTAGACCTGCAGACCTGCCTCTGTGTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCGACTTTGGCTTTGACTaGTTTCTACACAGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: STKNTKISRNWWCASSPSDFGFD*FLHSGS
Trigger: GGACCCACTGTGTAGAAACAAGTCAAAGCCAAAGTC...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358232.11
ENST00000540766.5
CDS-3UTR CAA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTCAAGACAGAGCACACTaGGCGTGGTATGCTATCTAT +
Preference number: 5 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSQDRAH*AWYAIY
Trigger: ATAGATAGCATACCACGCCAAGTGTGCTCTGTCTTG...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGACAGCTGTCACTGCATaGTCAATCTGCCAAATGGCT +
Preference number: 5 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMTAVTA*SICQMA
Trigger: AGCCATTTGGCAGATTGACAATGCAGTGACAGCTGT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGTACTTGCAGATAACCTaGGGAGTTCTGTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEYLQIT*GVLCWE
Trigger: CTCCCAGCACAGAACTCCCAAGGTTATCTGCAAGTA...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp GATGGCCATGAGCCACATGTGGCTATGAAGCACTTAAATGTGGCTAGTCTGAACTTTTTCCAAGTCATTTaGAACTGCCGTAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: DGHEPHVAMKHLNVASLNFFQVI*NCRSNE
Trigger: CTCATTGCTACGGCAGTTCAAAATGACTTGGAAAAA...GTTCAGACTAGCCACATTTAAGTGCTTCATAGCCACATGTGGCTCATGGCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS GCA 90 bp CTGGAAACAGCTAGTAAGAACTTCTCATTAGGTGAGAAGGCCATCTaGGTGACTGTCAAACTGTGGAAAACTAAATTCTGCACCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LETASKNFSLGEKAI*VTVKLWKTKFCTCF
Trigger: GAAACAGGTGCAGAATTTAGTTTTCCACAGTTTGACAGTCACGCAGATGGCCTTCTCACCTAATGAGAAGTTCTTACTAGCTGTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000541294.1
ENST00000542050.5
ENST00000542824.5
ENST00000543861.5
CDS-3UTR CAA 90 bp CCGCATAAACAGGTCCTTCATGGCCTTGAAGATGCACTGCTTTTAAAAGCTGATTTCCCAGTGAATCACTaGATTATCAGATCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: PHKQVLHGLEDALLLKADFPVNH*IIRSSR
Trigger: TCTGGAGGATCTGATAATCAAGTGATTCACTGGGAA...ATCAGCTTTTAAAAGCAGTGCATCTTCAAGGCCATGAAGGACCTGTTTATGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR CAA 90 bp GCCCATTCCACTCCTCTAATCCAATCCTCATGTCCACAGAGAGAAAGCACTTTCATTCTGCAATCATCATaGCCACATGCTAATATTGGT +
Preference number: 5 (lower is better)
Translates to: AHSTPLIQSSCPQRESTFILQSS*PHANIG
Trigger: ACCAATATTAGCATGTGGCAATGATGATTGCAGAAT...GAAAGTGCTTTCTCTCTGTGGACATGAGGATTGGATTAGAGGAGTGGAATGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000545632.5
CDS-3UTR CAA 90 bp CAGCTGATAAGCAGGAAAATGGGCAGGGCATTTTGGTCTTTGAGGTTCAAAGCTTGTATGACTTTGGCTTaGACTTGTTTCTACACAGTG +
Preference number: 5 (lower is better)
Translates to: QLISRKMGRAFWSLRFKACMTLA*TCFYTV
Trigger: CACTGTGTAGAAACAAGTCAAAGCCAAAGTCATACA...AGCTTTGAACCTCAAAGACCAAAATGCCCTGCCCATTTTCCTGCTTATCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp CAGCTTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTAGCCAGTGTATGACTTaGGCTTTGACTTGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: QLAKCNHSAPSASFCSVFSQCMT*ALTCFY
Trigger: GTAGAAACAAGTCAAAGCCAAAGTCATACACTGGCT...AAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CAA 90 bp TGCCCATTCCACTCCTCTAATCCAATCCTCATGTCCACAGAGAGAAAGCACTTTTGCCACATGCTAATATaGGTACATCAGTATTTGGCA +
Preference number: 5 (lower is better)
Translates to: CPFHSSNPILMSTERKHFCHMLI*VHQYLA
Trigger: TGCCAAATACTGATGTACCAATATTAGCATGTGGCA...AAAGTGCTTTCTCTCTGTGGACATGAGGATTGGATTAGAGGAGTGGAATGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542430.5
CDS-3UTR CAA 90 bp CGATCAGTGTACATAATGCAGGATCTGATGTCCTCCTCTGGTAAACAGCATGCATGCCACATGCTAATATaGGTACATCAGTATTTGGCA +
Preference number: 5 (lower is better)
Translates to: RSVYIMQDLMSSSGKQHACHMLI*VHQYLA
Trigger: TGCCAAATACTGATGTACCAATATTAGCATGTGGCA...TGCATGCTGTTTACCAGAGGAGGACATCAGATCCTGCATTATGTACACTGATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544267.5
CDS-3UTR CAA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTAGGGCATTTTGGTCTTaGAGGTTCAAAGCTCAGATG +
Preference number: 5 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSRAFWS*RFKAQM
Trigger: CATCTGAGCTTTGAACCTCAAAGACCAAAATGCCCT...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCGGAAGCATAGAGTATTaGTCTTCCAGTGACTGGCTT +
Preference number: 5 (lower is better)
Translates to: STKNTKISRNWWCASSPSGSIEY*SSSDWL
Trigger: AAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS CCA 90 bp TATTATTTCATTTGTCTGGATTATCATGTCTCCAAACCTACCTTCTaGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: YYFICLDYHVSKPTF*TLFRPESNSRICSC
Trigger: GCAGCTGCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGAAGGTAGGTTTGGAGACATGATAATCCAGACAAATGAAATAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535488.5
CDS-3UTR CAA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTTTCCCAGTGAATCACTaGATTATCAGATCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSFPVNH*IIRSSR
Trigger: TCTGGAGGATCTGATAATCAAGTGATTCACTGGGAA...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TTAGCTGCCTTACAAGCTGAGGCAAGCAGAGTCTTTGAACTGTTACAAGTAACATTCCCAGTGAATCACTaGATTATCAGATCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LAALQAEASRVFELLQVTFPVNH*IIRSSR
Trigger: TCTGGAGGATCTGATAATCAAGTGATTCACTGGGAA...TGTTACTTGTAACAGTTCAAAGACTCTGCTTGCCTCAGCTTGTAAGGCAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540799.1
CDS-3UTR CAA 90 bp AGGCACATTACTTCTGGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCAATTCTGCAATCATCATaGCCACATGCTAATATTGGT +
Preference number: 5 (lower is better)
Translates to: RHITSGPFLDQSRTAESAILQSS*PHANIG
Trigger: ACCAATATTAGCATGTGGCAATGATGATTGCAGAAT...TGCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGAAGTAATGTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR CAA 90 bp GAATCTGCAGCTGCAGAAACGATCAGTGTACATAATGCAGGATCTGATGTCCTCATTCTGCAATCATCATaGCCACATGCTAATATTGGT +
Preference number: 5 (lower is better)
Translates to: ESAAAETISVHNAGSDVLILQSS*PHANIG
Trigger: ACCAATATTAGCATGTGGCAATGATGATTGCAGAAT...GAGGACATCAGATCCTGCATTATGTACACTGATCGTTTCTGCAGCTGCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS-3UTR CAA 90 bp TGCTTCCATCTCTTAGCTACTGTGAATAATGGTGCCGTGAGTATGGGCATACAAGAAAGACAGCTTTATTaGATAATCCCAATGCAGGGA +
Preference number: 5 (lower is better)
Translates to: CFHLLATVNNGAVSMGIQERQLY*IIPMQG
Trigger: TCCCTGCATTGGGATTATCAAATAAAGCTGTCTTTC...TTGTATGCCCATACTCACGGCACCATTATTCACAGTAGCTAAGAGATGGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TTGCAAAGTGTAACCACTCAGCACCTTCTGCTTCCTTCTGTTCAGTTTTTCCACGAAAGACAGCTTTATTaGATAATCCCAATGCAGGGA +
Preference number: 5 (lower is better)
Translates to: LQSVTTQHLLLPSVQFFHERQLY*IIPMQG
Trigger: TCCCTGCATTGGGATTATCAAATAAAGCTGTCTTTC...GTGGAAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CAA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGCCAGTGAAGAAATACTaGCTGTCAGGACTCCAATCA +
Preference number: 5 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGPVKKY*LSGLQS
Trigger: TGATTGGAGTCCTGACAGCAAGTATTTCTTCACTGG...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCAGCCAGTGTATGACTTaGGCTTTGACTTGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: STKNTKISRNWWCASSPSSQCMT*ALTCFY
Trigger: GTAGAAACAAGTCAAAGCCAAAGTCATACACTGGCT...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358232.11
ENST00000540766.5
CDS-3UTR CAA 90 bp TTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATCAGGATCTTCACCACAGCTaGCAAAGTGTAACCACTCAG +
Preference number: 5 (lower is better)
Translates to: FDLFLHSGSSHLFLELDQDLHHS*QSVTTQ
Trigger: CTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGATC...CTGATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CAA 90 bp AATATTGGTACTTCTGGACCCTTTTTAGACCAGAGTCGAACAGCAGAATCTGCATGCCACATGCTAATATaGGTACTTCTGGACCCTTTT +
Preference number: 5 (lower is better)
Translates to: NIGTSGPFLDQSRTAESACHMLI*VLLDPF
Trigger: AAAAGGGTCCAGAAGTACCAATATTAGCATGTGGCA...TGCAGATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGAAGTACCAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545632.5
CDS-3UTR CAA 90 bp GGAAGCATAGAGTATTTGTCTTCCAGTGACTGGCTTACTTCACTTAGCATCATGAACAAGGTTCATACATaGCACTGGATTCACACGTCT +
Preference number: 5 (lower is better)
Translates to: GSIEYLSSSDWLTSLSIMNKVHT*HWIHTS
Trigger: AGACGTGTGAATCCAGTGCAATGTATGAACCTTGTT...CATGATGCTAAGTGAAGTAAGCCAGTCACTGGAAGACAAATACTCTATGCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS TCA 90 bp AACCGATTAATCATTGCCAAACATTTCAGGTCATACCCATGTATCTaGGGCCTTGCAATTTCATGCCAAGTCACCTGTGATTGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: NRLIIAKHFRSYPCI*GLAISCQVTCDWSF
Trigger: AAAAGACCAATCACAGGTGACTTGGCATGAAATTGCAAGGCCTCAGATACATGGGTATGACCTGAAATGTTTGGCAATGATTAATCGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000542050.5
ENST00000542824.5
CDS-3UTR CAA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTAATCTTGTGAACAGCTaGCTAGGAAAAGATCTCTAC +
Preference number: 5 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSNLVNS*LGKDLY
Trigger: GTAGAGATCTTTTCCTAGCAAGCTGTTCACAAGATT...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TTTGGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTCGAACTCAGGTGAGATaGTATCCTGCTTTTTCCACA +
Preference number: 5 (lower is better)
Translates to: FGFDLFLHSGSSHLFLELRTQVR*YPAFST
Trigger: TGTGGAAAAAGCAGGATACAATCTCACCTGAGTTCG...AAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CAA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGCAAACCTACAACTGCTaGCGAAACTCTACAATGTCT +
Preference number: 5 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGQTYNC*RNSTMS
Trigger: AGACATTGTAGAGTTTCGCAAGCAGTTGTAGGTTTG...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS TCA 90 bp TGTGATTGGTCTTTTCTCTTCCATGGAGCAAAAAGTCTAGTTGTCTaGTCAGTACCAACAGTGATAATAAATTCTCCTTCTGGATCCCAG +
Preference number: 5 (lower is better)
Translates to: CDWSFLFHGAKSLVV*SVPTVIINSPSGSQ
Trigger: CTGGGATCCAGAAGGAGAATTTATTATCACTGTTGGTACTGATCAGACAACTAGACTTTTTGCTCCATGGAAGAGAAAAGACCAATCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000542824.5
CDS-3UTR CAA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTTGGAAGATCACTATCTaGATTACAGAGCACATGATT +
Preference number: 5 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSWKITI*ITEHMI
Trigger: AATCATGTGCTCTGTAATCAAGATAGTGATCTTCCA...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGTGCCACATGCTAATATaGGTACATCAGTATTTGGCA +
Preference number: 5 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGCHMLI*VHQYLA
Trigger: TGCCAAATACTGATGTACCAATATTAGCATGTGGCA...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp CAAGAGGCAAACAAGGTTCATACATTGCACTGGATTCACACGTCTCAAGTATCTCAGCATGCAGAAAAGTaGAAAGAATTGTACAGTGAA +
Preference number: 5 (lower is better)
Translates to: QEANKVHTLHWIHTSQVSQHAEK*KELYSE
Trigger: TTCACTGTACAATTCTTTCAACTTTTCTGCATGCTG...AGATACTTGAGACGTGTGAATCCAGTGCAATGTATGAACCTTGTTTGCCTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TCTACTAAAAATACAAAAATTAGCCGGAATTGGTGGTGTGCCTCTAGTCCCAGCCTTGTAATGTATTTGTaGAAGAATCTAGGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: STKNTKISRNWWCASSPSLVMYL*KNLGPS
Trigger: AGAGGGACCTAGATTCTTCAACAAATACATTACAAG...GCTGGGACTAGAGGCACACCACCAATTCCGGCTAATTTTTGTATTTTTAGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS GCA 90 bp AACTTTTTCATCTGCTCCAGATACAAACTGAAACCGATTAATCATTaGCAAACATTTCAGGTCATACCCATGTATCTGAGGCCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: NFFICSRYKLKPINH*QTFQVIPMYLRPCN
Trigger: ATTGCAAGGCCTCAGATACATGGGTATGACCTGAAATGTTTGGCAATGATTAATCGGTTTCAGTTTGTATCTGGAGCAGATGAAAAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000542050.5
ENST00000542824.5
CDS-3UTR CAA 90 bp GAATTCTGCAATCATCATTGCCACATGCTAATATTGGTACATCAGTATTTGGCATTCCCAGTGAATCACTaGATTATCAGATCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: EFCNHHCHMLILVHQYLAFPVNH*IIRSSR
Trigger: TCTGGAGGATCTGATAATCAAGTGATTCACTGGGAA...TGCCAAATACTGATGTACCAATATTAGCATGTGGCAATGATGATTGCAGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542430.5
ENST00000544267.5
CDS-3UTR CAA 90 bp TTCTACATCTACTCTCTGAAGAGGGCAATAAATAAGGAAATGTCCCAAAGAGGGATTCTGCAATCATCATaGCCACATGCTAATATTGGT +
Preference number: 5 (lower is better)
Translates to: FYIYSLKRAINKEMSQRGILQSS*PHANIG
Trigger: ACCAATATTAGCATGTGGCAATGATGATTGCAGAAT...CCCTCTTTGGGACATTTCCTTATTTATTGCCCTCTTCAGAGAGTAGATGTAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TTTGGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTTTTGTAAAACACAGGTaGCCAGTGAACTGCATTTAC +
Preference number: 5 (lower is better)
Translates to: FGFDLFLHSGSSHLFLELFVKHR*PVNCIY
Trigger: GTAAATGCAGTTCACTGGCAACCTGTGTTTTACAAA...AAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CAA 90 bp TTTGGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTTGTATGACTTTGGCTTaGACTTGTTTCTACACAGTG +
Preference number: 5 (lower is better)
Translates to: FGFDLFLHSGSSHLFLELCMTLA*TCFYTV
Trigger: CACTGTGTAGAAACAAGTCAAAGCCAAAGTCATACA...AAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539560.5
ENST00000540766.5
CDS-3UTR CAA 90 bp GTTGAATGGAAGCCAGACTCATACACTAATCTCATCTCCACTTTTAGAGATGAGTACAGTGCACATTTATaGACTCTGTGTATCTTCACA +
Preference number: 5 (lower is better)
Translates to: VEWKPDSYTNLISTFRDEYSAHL*TLCIFT
Trigger: TGTGAAGATACACAGAGTCAATAAATGTGCACTGTA...CTCATCTCTAAAAGTGGAGATGAGATTAGTGTATGAGTCTGGCTTCCATTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS-3UTR CAA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTACACACTGGTTACTGTaGTTCTCCCTTTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: CFLNIIKYPARVQICFVPTHWLL*FSLSSR
Trigger: TCTGGAAGAAAGGGAGAACAACAGTAACCAGTGTGT...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS GCA 90 bp AGGAGTTCAATGTTCAATGGAACTGAGTGTCCAGCAGACCAGGAATaGAGTATTATACTTTGTCAACTTGAAAATGTCATGTATTTGAGA +
Preference number: 5 (lower is better)
Translates to: RSSMFNGTECPADQE*SIILCQLENVMYLR
Trigger: TCTCAAATACATGACATTTTCAAGTTGACAAAGTATAATACTGCATTCCTGGTCTGCTGGACACTCAGTTCCATTGAACATTGAACTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536373.5
CDS-3UTR CAA 90 bp TTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTGATCAGTGGAAGATCACTATCTaGATTACAGAGCACATGATT +
Preference number: 5 (lower is better)
Translates to: FDLFLHSGSSHLFLELDQWKITI*ITEHMI
Trigger: AATCATGTGCTCTGTAATCAAGATAGTGATCTTCCA...CTGATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS-3UTR CAA 90 bp TTTGGCTTTGACTTGTTTCTACACAGTGGGTCCAGTCATTTATTTCTGGAACTTTGCACAGAAGTAATTTaGTTGGTGAAGGCAAAAAGA +
Preference number: 5 (lower is better)
Translates to: FGFDLFLHSGSSHLFLELCTEVI*LVKAKR
Trigger: TCTTTTTGCCTTCACCAACAAAATTACTTCTGTGCA...AAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540766.5
CDS-3UTR CAA 90 bp TGTTTCCTTAATATCATCAAATATCCAGCCAGAGTTCAAATTTGCTTTGTCCCTTTTGTAAAACACAGGTaGCCAGTGAACTGCATTTAC +
Preference number: 5 (lower is better)
Translates to: CFLNIIKYPARVQICFVPFVKHR*PVNCIY
Trigger: GTAAATGCAGTTCACTGGCAACCTGTGTTTTACAAA...AGGGACAAAGCAAATTTGAACTCTGGCTGGATATTTGATGATATTAAGGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358232.11
CDS GCA 72 bp GGGGCAGGGGGTCATAGAGCACCACGGAGCAGGACGTaGCAAAGGCCAGAAGTCCTCTGGGCCCAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: GAGGHRAPRSRT*QRPEVLWAQSS
Trigger: GGAGCTCTGGGCCCAGAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGGTGCTCTATGACCCCCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544267.5
ENST00000545632.5
CDS CCA 72 bp AGAGTCGCAGCTCCTGCTACAGAGGGCGAGAGAGGCTaGTGGCTTCCAGGCCCTGCCTCGTTCCACCTGGCC +
Preference number: 6 (lower is better)
Translates to: RVAAPATEGERG*WLPGPASFHLA
Trigger: GGCCAGGTGGAACGAGGCAGGGCCTGGAAGCCACCAGCCTCTCTCGCCCTCTGTAGCAGGAGCTGCGACTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350494.10
ENST00000442325.6
ENST00000540730.5
CDS CAA 90 bp GTCCTCTGGGCCCAGAGCTCCAGTTCAGGACTCCCCGCACCCGGTTaGGGCAGCAAAACACGTGAGAAGTCTCCAGCACGGGTGCCACCA +
Preference number: 6 (lower is better)
Translates to: VLWAQSSSSGLPAPG*GSKTREKSPARVPP
Trigger: TGGTGGCACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAGTCCTGAACTGGAGCTCTGGGCCCAGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535488.5
ENST00000539560.5
ENST00000540135.5
ENST00000540799.1
ENST00000541190.5
ENST00000542430.5
ENST00000542824.5
ENST00000544267.5
ENST00000545632.5
CDS TCA 72 bp AGGACTCCCCGCACCCGGTTTGGGCAGCAAAACACGTaGGAAGTCTCCAGCACGGGTGCCACCATGTCGCCA +
Preference number: 6 (lower is better)
Translates to: RTPRTRFGQQNT*EVSSTGATMSP
Trigger: TGGCGACATGGTGGCACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535488.5
ENST00000539560.5
ENST00000540135.5
ENST00000540799.1
ENST00000541190.5
ENST00000542430.5
ENST00000542824.5
ENST00000544267.5
ENST00000545632.5
CDS CCA 72 bp CCCAGAGCTCCAGTTCAGGACTCCCCGCACCCGGTTTaGGCAGCAAAACACGTGAGAAGTCTCCAGCACGGG +
Preference number: 6 (lower is better)
Translates to: PRAPVQDSPHPV*AAKHVRSLQHG
Trigger: CCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAGTCCTGAACTGGAGCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535488.5
ENST00000539560.5
ENST00000540135.5
ENST00000540799.1
ENST00000541190.5
ENST00000542430.5
ENST00000542824.5
ENST00000544267.5
ENST00000545632.5
CDS CAA 72 bp GCCCAGAGCTCCAGTTCAGGACTCCCCGCACCCGGTTaGGGCAGCAAAACACGTGAGAAGTCTCCAGCACGG +
Preference number: 6 (lower is better)
Translates to: AQSSSSGLPAPG*GSKTREKSPAR
Trigger: CCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAGTCCTGAACTGGAGCTCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535488.5
ENST00000539560.5
ENST00000540135.5
ENST00000540799.1
ENST00000541190.5
ENST00000542430.5
ENST00000542824.5
ENST00000544267.5
ENST00000545632.5
CDS GCA 72 bp TTTTCAGGGGGTCATAGAGCACCACGGAGCAGGACGTaGCAAAGGCCAGAAGTCCTCTGGGCCCAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: FSGGHRAPRSRT*QRPEVLWAQSS
Trigger: GGAGCTCTGGGCCCAGAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGGTGCTCTATGACCCCCTGAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535488.5
ENST00000539560.5
ENST00000540135.5
ENST00000540799.1
ENST00000541190.5
ENST00000542430.5
ENST00000542824.5
CDS CCA 72 bp AGAAGTCTCCAGCACGGGTGCCACCATGTCGCCAACTaGTCAGCCGCACAAACAAGAGACGCGCACTTCCGC +
Preference number: 6 (lower is better)
Translates to: RSLQHGCHHVAN*SAAQTRDAHFR
Trigger: GCGGAAGTGCGCGTCTCTTGTTTGTGCGGCTGACCAGTTGGCGACATGGTGGCACCCGTGCTGGAGACTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544267.5
CDS GCA 72 bp TGGGCAGCAAAACACGTGAGAAGTCTCCAGCACGGGTaGCACCATGTCGCCAACTGGTCAGCCGCACAAACA +
Preference number: 6 (lower is better)
Translates to: WAAKHVRSLQHG*HHVANWSAAQT
Trigger: TGTTTGTGCGGCTGACCAGTTGGCGACATGGTGGCACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535488.5
ENST00000539560.5
ENST00000540135.5
ENST00000541190.5
ENST00000544267.5
ENST00000545632.5
CDS TCA 72 bp CTTCCACAGAGCCTTGCACAGAATGGAAGCGTAACATaGAACCATAGAGTCGCAGCTCCTGCTACAGAGGGC +
Preference number: 6 (lower is better)
Translates to: LPQSLAQNGSVT*NHRVAAPATEG
Trigger: GCCCTCTGTAGCAGGAGCTGCGACTCTATGGTTTCATGTTACGCTTCCATTCTGTGCAAGGCTCTGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350494.10
ENST00000442325.6
ENST00000540730.5
CDS CCA 72 bp AGCAGGGGCCAATGTTGTGCTCAATACAGTCATCAGTaGAGTCGCACTCACCCCAGACAACCACCTAATACA +
Preference number: 6 (lower is better)
Translates to: SRGQCCAQYSHQ*SRTHPRQPPNT
Trigger: TGTATTAGGTGGTTGTCTGGGGTGAGTGCGACTCCACTGATGACTGTATTGAGCACAACATTGGCCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536830.1
CDS TCA 72 bp AGACTAGGTCTTGGACACCATCAAAGTGTCCTGAAATaGCAATCTCTGGAGTCCACTCTCTCTGTTCTAGCC +
Preference number: 6 (lower is better)
Translates to: RLGLGHHQSVLK*QSLESTLSVLA
Trigger: GGCTAGAACAGAGAGAGTGGACTCCAGAGATTGTCATTTCAGGACACTTTGATGGTGTCCAAGACCTAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350494.10
ENST00000542824.5
CDS TCA 72 bp TTCTGTTTCCAAAGGTGCAACGCTCCGTGGAAAGCATaGGCAATGATCATGGAGCCATCTTCATTGAACTGG +
Preference number: 6 (lower is better)
Translates to: FCFQRCNAPWKA*AMIMEPSSLNW
Trigger: CCAGTTCAATGAAGATGGCTCCATGATCATTGCTCATGCTTTCCACGGAGCGTTGCACCTTTGGAAACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535093.1
ENST00000539560.5
CDS CAA 90 bp CCCCAGACAACCACCTTTTTGTCTCGACTCCCAGTGAAGAAATACTaGCTGTCAGGACTCCAATCACAAGACCAAATAATTCTACGAACT +
Preference number: 6 (lower is better)
Translates to: PQTTTFLSRLPVKKY*LSGLQSQDQIILRT
Trigger: AGTTCGTAGAATTATTTGGTCTTGTGATTGGAGTCCTGACAGCAAGTATTTCTTCACTGGGAGTCGAGACAAAAAGGTGGTTGTCTGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS CAA 90 bp CCCCAGACAACCACCTTTTTGTCTCGACTCCCAGTGAAGAAATACTaGCTGTCAGGACTCCAATCACAAGACCAAATAATTCTGTTAGGA +
Preference number: 6 (lower is better)
Translates to: PQTTTFLSRLPVKKY*LSGLQSQDQIILLG
Trigger: TCCTAACAGAATTATTTGGTCTTGTGATTGGAGTCCTGACAGCAAGTATTTCTTCACTGGGAGTCGAGACAAAAAGGTGGTTGTCTGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545302.5
CDS TCA 72 bp TTACAAATCCACTGTATGCAATTGACTCGGGCGGTGTaGCCATTCAAGTTGGTAACAACAACCCTTTTCAGG +
Preference number: 6 (lower is better)
Translates to: LQIHCMQLTRAV*PFKLVTTTLFR
Trigger: CCTGAAAAGGGTTGTTGTTACCAACTTGAATGGTCACACCGCCCGAGTCAATTGCATACAGTGGATTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535488.5
ENST00000539560.5
ENST00000540135.5
ENST00000540799.1
ENST00000541190.5
ENST00000542430.5
ENST00000542824.5
CDS GCA 72 bp CTAAAAACTGGCTCGAACTCAGGTGAGATTGTATCCTaGTTTTTCCACAATGACCAGGTTCGATCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: LKTGSNSGEIVS*FFHNDQVRSLE
Trigger: TTCCAGAGATCGAACCTGGTCATTGTGGAAAAAGCAGGATACAATCTCACCTGAGTTCGAGCCAGTTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000542824.5
CDS GCA 72 bp GAAGCTGTTTTACCGAACTCAGGTGAGATTGTATCCTaGTTTTTCCACAATGACCAGGTTCGATCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: EAVLPNSGEIVS*FFHNDQVRSLE
Trigger: TTCCAGAGATCGAACCTGGTCATTGTGGAAAAAGCAGGATACAATCTCACCTGAGTTCGGTAAAACAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541294.1
CDS CAA 72 bp CCAAACATTTCAGGTCATACCCATGTATCTGAGGCCTaGCAATTTCATGCCAAGTCACCTGTGATTGGTCTT +
Preference number: 6 (lower is better)
Translates to: PNISGHTHVSEA*QFHAKSPVIGL
Trigger: AAGACCAATCACAGGTGACTTGGCATGAAATTGCAAGGCCTCAGATACATGGGTATGACCTGAAATGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000542050.5
ENST00000542824.5
CDS CAA 72 bp CCCAATCAGAAGCTGTTTTACCGAACTCAGGTGAGATaGTATCCTGCTTTTTCCACAATGACCAGGTTCGAT +
Preference number: 6 (lower is better)
Translates to: PNQKLFYRTQVR*YPAFSTMTRFD
Trigger: ATCGAACCTGGTCATTGTGGAAAAAGCAGGATACAATCTCACCTGAGTTCGGTAAAACAGCTTCTGATTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541294.1
CDS TCA 72 bp ATCATTGCCAAACATTTCAGGTCATACCCATGTATCTaGGGCCTTGCAATTTCATGCCAAGTCACCTGTGAT +
Preference number: 6 (lower is better)
Translates to: IIAKHFRSYPCI*GLAISCQVTCD
Trigger: ATCACAGGTGACTTGGCATGAAATTGCAAGGCCTCAGATACATGGGTATGACCTGAAATGTTTGGCAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000542050.5
ENST00000542824.5
CDS GCA 72 bp GCTAGTAAGAACTTCTCATTAGGTGAGAAGGCCATCTaGGTGACTGTCAAACTGTGGAAAACTAAATTCTGC +
Preference number: 6 (lower is better)
Translates to: ASKNFSLGEKAI*VTVKLWKTKFC
Trigger: GCAGAATTTAGTTTTCCACAGTTTGACAGTCACGCAGATGGCCTTCTCACCTAATGAGAAGTTCTTACTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000541294.1
ENST00000542050.5
ENST00000542824.5
ENST00000543861.5
CDS CCA 72 bp ATTTGTCTGGATTATCATGTCTCCAAACCTACCTTCTaGACCCTTTTTAGACCAGAGTCGAACAGCAGAATC +
Preference number: 6 (lower is better)
Translates to: ICLDYHVSKPTF*TLFRPESNSRI
Trigger: GATTCTGCTGTTCGACTCTGGTCTAAAAAGGGTCCAGAAGGTAGGTTTGGAGACATGATAATCCAGACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535488.5
CDS CAA 72 bp GCTTCCATATTCTTATCAGGCAATCTTGTGAACAGCTaGCTAGGAAAAGATCTCTACCAAAGGCTGCCCATT +
Preference number: 6 (lower is better)
Translates to: ASIFLSGNLVNS*LGKDLYQRLPI
Trigger: AATGGGCAGCCTTTGGTAGAGATCTTTTCCTAGCAAGCTGTTCACAAGATTGCCTGATAAGAATATGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000442325.6
ENST00000535093.1
ENST00000536373.5
ENST00000539560.5
ENST00000542824.5
ENST00000543439.5
CDS CAA 72 bp AAGGAAGGTCAAGTCTTCCTCAGTTATCCAAGAACTTaGAAAGGCTTCAAAGACATGAGGCTCTACCCTTCA +
Preference number: 6 (lower is better)
Translates to: KEGQVFLSYPRT*KGFKDMRLYPS
Trigger: TGAAGGGTAGAGCCTCATGTCTTTGAAGCCTTTCAAAGTTCTTGGATAACTGAGGAAGACTTGACCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541294.1
CDS TCA 72 bp TTACAAATCCACTGTATGCAATTGACTCGGGCGGTGTaGCCATTCAAGTTGGTAACAACAACCCTTTTAATG +
Preference number: 6 (lower is better)
Translates to: LQIHCMQLTRAV*PFKLVTTTLLM
Trigger: CATTAAAAGGGTTGTTGTTACCAACTTGAATGGTCACACCGCCCGAGTCAATTGCATACAGTGGATTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543127.5
CDS CCA 72 bp AAACTCCTGACTCTTCATCTGGAGCCCAGAGAATCATaGTTTTATCCATGGAAGCAGATAATAATCTCACTG +
Preference number: 6 (lower is better)
Translates to: KLLTLHLEPRES*FYPWKQIIISL
Trigger: CAGTGAGATTATTATCTGCTTCCATGGATAAAACCATGATTCTCTGGGCTCCAGATGAAGAGTCAGGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535093.1
ENST00000539560.5
ENST00000542824.5
CDS CAA 72 bp GCTTCCATATTCTTATCAGGCAATCTTGTGAACAGCTaGCTAGGAAAAGATCTCTACCTTCTGGACCCTTTT +
Preference number: 6 (lower is better)
Translates to: ASIFLSGNLVNS*LGKDLYLLDPF
Trigger: AAAAGGGTCCAGAAGGTAGAGATCTTTTCCTAGCAAGCTGTTCACAAGATTGCCTGATAAGAATATGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423854.6
CDS CAA 90 bp AATAACTTTCCCAATCAGAAGCTGTTTTACCGAACTCAGGTGAGATaGTATCCTGCTTTTTCCACAATGACCAGGTTCGATCTCTGGAAA +
Preference number: 6 (lower is better)
Translates to: NNFPNQKLFYRTQVR*YPAFSTMTRFDLWK
Trigger: TTTCCAGAGATCGAACCTGGTCATTGTGGAAAAAGCAGGATACAATCTCACCTGAGTTCGGTAAAACAGCTTCTGATTGGGAAAGTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541294.1
CDS CAA 90 bp AAATCTTACAAGGAAGGTCAAGTCTTCCTCAGTTATCCAAGAACTTaGAAAGGCTTCAAAGACATGAGGCTCTACCCTTCACTCTGTTAT +
Preference number: 6 (lower is better)
Translates to: KSYKEGQVFLSYPRT*KGFKDMRLYPSLCY
Trigger: ATAACAGAGTGAAGGGTAGAGCCTCATGTCTTTGAAGCCTTTCAAAGTTCTTGGATAACTGAGGAAGACTTGACCTTCCTTGTAAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541294.1
CDS GCA 72 bp ATCTGCTCCAGATACAAACTGAAACCGATTAATCATTaGCAAACATTTCAGGTCATACCCATGTATCTGAGG +
Preference number: 6 (lower is better)
Translates to: ICSRYKLKPINH*QTFQVIPMYLR
Trigger: CCTCAGATACATGGGTATGACCTGAAATGTTTGGCAATGATTAATCGGTTTCAGTTTGTATCTGGAGCAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000542050.5
ENST00000542824.5
CDS CCA 72 bp ATAATAAATTCTCCTTCTGGATCCCAGACTAGGTCTTaGACACCATCAAAGTGTCCTGAAATGACAATCTCT +
Preference number: 6 (lower is better)
Translates to: IINSPSGSQTRS*TPSKCPEMTIS
Trigger: AGAGATTGTCATTTCAGGACACTTTGATGGTGTCCAAGACCTAGTCTGGGATCCAGAAGGAGAATTTATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000542824.5
CDS CAA 72 bp TCACAAGACCAAATAATTCTACGAACTCAGGTGAGATaGTATCCTGCTTTTTCCACAATGACCAGGTTCGAT +
Preference number: 6 (lower is better)
Translates to: SQDQIILRTQVR*YPAFSTMTRFD
Trigger: ATCGAACCTGGTCATTGTGGAAAAAGCAGGATACAATCTCACCTGAGTTCGTAGAATTATTTGGTCTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539560.5
CDS TCA 72 bp ACCCGAAGAACTTTTTCATCTGCTCCAGATACAAACTaGAACCGATTAATCATTGCCAAACATTTCAGGTCA +
Preference number: 6 (lower is better)
Translates to: TRRTFSSAPDTN*NRLIIAKHFRS
Trigger: TGACCTGAAATGTTTGGCAATGATTAATCGGTTTCAGTTTGTATCTGGAGCAGATGAAAAAGTTCTTCGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000542050.5
ENST00000542824.5
CDS TCA 72 bp TCTTTTCTCTTCCATGGAGCAAAAAGTCTAGTTGTCTaGTCAGTACCAACAGTGATAATAAATTCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: SFLFHGAKSLVV*SVPTVIINSPS
Trigger: AGAAGGAGAATTTATTATCACTGTTGGTACTGATCAGACAACTAGACTTTTTGCTCCATGGAAGAGAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000542824.5
CDS TCA 72 bp AAGATCACTATCTTGATTACAGAGCACATGATTCAGTaGTTGTCCTGTAATGGCACAAAAATTTTCCACAAA +
Preference number: 6 (lower is better)
Translates to: KITILITEHMIQ*LSCNGTKIFHK
Trigger: TTTGTGGAAAATTTTTGTGCCATTACAGGACAATCACTGAATCATGTGCTCTGTAATCAAGATAGTGATCTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000539560.5
ENST00000542050.5
ENST00000542824.5
CDS TCA 72 bp TTTGTTGGTGAAGGCAAAAAGACTAAAAACTGGCTCTaGAAGAAATATGTATACACTATTCACAAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: FVGEGKKTKNWL*KKYVYTIHKAE
Trigger: CTCTGCTTTGTGAATAGTGTATACATATTTCTTTCAGAGCCAGTTTTTAGTCTTTTTGCCTTCACCAACAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000541748.5
CDS CAA 72 bp GTCTTATGTTATCGTCATCCTGAGTTTCTAAAGATGTaGACTTTATATACAGCTTCCATATTCTTATCAGGC +
Preference number: 6 (lower is better)
Translates to: VLCYRHPEFLKM*TLYTASIFLSG
Trigger: GCCTGATAAGAATATGGAAGCTGTATATAAAGTCAACATCTTTAGAAACTCAGGATGACGATAACATAAGAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000350494.10
ENST00000351393.10
ENST00000358232.11
ENST00000423854.6
ENST00000442325.6
ENST00000535093.1
ENST00000536373.5
ENST00000539560.5
ENST00000542824.5
ENST00000543439.5