RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELOVL7 (Homo sapiens)

Ensembl gene IDs: ENSG00000164181

Ensembl transcript IDs: ENST00000425382.5, ENST00000504455.5, ENST00000505959.5, ENST00000507047.5, ENST00000508821.6, ENST00000511799.5, ENST00000514809.1

Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCTCATTTTGGTCTCTATACTACTTGGGTTCTTTGGAAATGGTGTaGTTTCTAACAGCACCTAGCATACCTTCTCATTTTAGCACAGGT +
Preference number: 1 (lower is better)
Translates to: ASFWSLYYLGSLEMV*FLTAPSIPSHFSTG
Trigger: ACCTGTGCTAAAATGAGAAGGTATGCTAGGTGCTGTTAGAAATCACACCATTTCCAAAGAACCCAAGTAGTATAGAGACCAAAATGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR CCA 90 bp CAGCAGAAACATGAAACTGTAACTCATAATGATGCACGCAAAGACTaGAAACTGATACTTGCAATCCTCCATGAAAAAGAACTGGCTTAT +
Preference number: 1 (lower is better)
Translates to: QQKHETVTHNDARKD*KLILAILHEKELAY
Trigger: ATAAGCCAGTTCTTTTTCATGGAGGATTGCAAGTATCAGTTTCCAGTCTTTGCGTGCATCATTATGAGTTACAGTTTCATGTTTCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504455.5
3UTR CCA 90 bp CCACAATTTGCCTCTAGTTGCTTCACAGCCACTCTAACTCATATCTaGAAACTGTGTACAATGGGTAATATTATTTATGATTTAAGGGTA +
Preference number: 1 (lower is better)
Translates to: PQFASSCFTATLTHI*KLCTMGNIIYDLRV
Trigger: TACCCTTAAATCATAAATAATATTACCCATTGTACACAGTTTCCAGATATGAGTTAGAGTGGCTGTGAAGCAACTAGAGGCAAATTGTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp TTTGGGCAACCTCTGACCTTTGGTGTAAGCACGGTACCAAAAATGGAGAAAGAGATACTTCTGGTAGGCTaGCCCCAATGCAGAAAGTCC +
Preference number: 2 (lower is better)
Translates to: FGQPLTFGVSTVPKMEKEILLVG*PQCRKS
Trigger: GGACTTTCTGCATTGGGGCCAGCCTACCAGAAGTAT...CTCTTTCTCCATTTTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGCCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504455.5
3UTR-3UTR TCA 90 bp TTTGGGCAACCTCTGACCTTTGGTGTAAGCACGGTACCAAAAATGGAGAAAGAGACCAGGTCCACGGCATaGTGGTATGATGGAATACAT +
Preference number: 2 (lower is better)
Translates to: FGQPLTFGVSTVPKMEKETRSTA*WYDGIH
Trigger: ATGTATTCCATCATACCATCATGCCGTGGACCTGGT...CTCTTTCTCCATTTTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGCCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504455.5
3UTR-3UTR CCA 90 bp AAATTTGGAGAAGTAATAAAGCCAGCAGGTACGTGCCATCCTCAAAGCTGTGGGCCATCCTCAAAGCTGTaGGTGACCGTGAATAGTCAA +
Preference number: 2 (lower is better)
Translates to: KFGEVIKPAGTCHPQSCGPSSKL*VTVNSQ
Trigger: TTGACTATTCACGGTCACCCACAGCTTTGAGGATGG...CCCACAGCTTTGAGGATGGCACGTACCTGCTGGCTTTATTACTTCTCCAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504455.5
ENST00000514809.1
3UTR-3UTR TCA 90 bp AAATTTGGAGAAGTAATAAAGCCAGCAGGTACGTGCCATCCTCAAAGCTGTGGGAATGTCACATCGAAATaGATAACCTATACCCCAGCC +
Preference number: 2 (lower is better)
Translates to: KFGEVIKPAGTCHPQSCGNVTSK*ITYTPA
Trigger: GGCTGGGGTATAGGTTATTCATTTCGATGTGACATT...CCCACAGCTTTGAGGATGGCACGTACCTGCTGGCTTTATTACTTCTCCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504455.5
ENST00000514809.1
3UTR-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCGCCAGGGCCTACAGGTaGTTTCCAGACTTTCCAGAC +
Preference number: 2 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGARAYR*FPDFPD
Trigger: GTCTGGAAAGTCTGGAAACCACCTGTAGGCCCTGGC...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTAGTAATCCCAGAACTTTaGGAGGCCGAGGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLVIPEL*EAEVGG
Trigger: TCCTCCCACCTCGGCCTCCCAAAGTTCTGGGATTAC...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR TCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGGACAGGAGAATCACTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMDRRIT*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGTC...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCGCAACCTCTGACCTTTaGTGTAAGCACGGTACCAAA +
Preference number: 2 (lower is better)
Translates to: ASGSQISDIPITYHKNTSATSDL*CKHGTK
Trigger: TTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGC...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504455.5
3UTR-3UTR TCA 90 bp TTGCAATCCTCCATGAAAAAGAACTGGCTTATGTGGATGGCGACAATAACAAACAATGTCACATCGAAATaGATAACCTATACCCCAGCC +
Preference number: 2 (lower is better)
Translates to: LQSSMKKNWLMWMATITNNVTSK*ITYTPA
Trigger: GGCTGGGGTATAGGTTATTCATTTCGATGTGACATT...GTTTGTTATTGTCGCCATCCACATAAGCCAGTTCTTTTTCATGGAGGATTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504455.5
3UTR-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCCAGAAGACTGTTATCTaGAAGCTTCGGGCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: ASGSQISDIPITYHKNTSQKTVI*KLRALK
Trigger: TTTGAGAGCCCGAAGCTTCCAGATAACAGTCTTCTG...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp TTGCAATCCTCCATGAAAAAGAACTGGCTTATGTGGATGGCGACAATAACAAACGTATTTAGAAGGGCATaGAATGTTCCCAAACCACCT +
Preference number: 2 (lower is better)
Translates to: LQSSMKKNWLMWMATITNVFRRA*NVPKPP
Trigger: AGGTGGTTTGGGAACATTCCATGCCCTTCTAAATAC...GTTTGTTATTGTCGCCATCCACATAAGCCAGTTCTTTTTCATGGAGGATTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504455.5
3UTR-3UTR TCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCTATCAGCAAAACTGGTaGTGGCTACTGAAAAGATCC +
Preference number: 2 (lower is better)
Translates to: ASGSQISDIPITYHKNTSYQQNW*WLLKRS
Trigger: GGATCTTTTCAGTAGCCATCACCAGTTTTGCTGATA...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR TCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTAACAGTTAAGGAGTCCTaGGACCTTTCCAGTGGAATA +
Preference number: 2 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLTVKES*DLSSGI
Trigger: TATTCCACTGGAAAGGTCTCAGGACTCCTTAACTGT...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTACAGAAGACTGTTATCTaGAAGCTTCGGGCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLQKTVI*KLRALK
Trigger: TTTGAGAGCCCGAAGCTTCCAGATAACAGTCTTCTG...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCGCTAGCTTGCTAAAATaGGAGTTAACTCTAGAGCAA +
Preference number: 2 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIASLLK*ELTLEQ
Trigger: TTGCTCTAGAGTTAACTCCCATTTTAGCAAGCTAGC...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCGATGCACGCAAAGACTaGAAACTGATACTTGCAATC +
Preference number: 2 (lower is better)
Translates to: ASGSQISDIPITYHKNTSDARKD*KLILAI
Trigger: GATTGCAAGTATCAGTTTCCAGTCTTTGCGTGCATC...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504455.5
3UTR-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCCATTTTTCACAGTTTTaGGCAACCTCTGACCTTTGG +
Preference number: 2 (lower is better)
Translates to: ASGSQISDIPITYHKNTSHFSQF*ATSDLW
Trigger: CCAAAGGTCAGAGGTTGCCCAAAACTGTGAAAAATG...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504455.5
3UTR-3UTR TCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGTATCAGCAAAACTGGTaGTGGCTACTGAAAAGATCC +
Preference number: 2 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMYQQNW*WLLKRS
Trigger: GGATCTTTTCAGTAGCCATCACCAGTTTTGCTGATA...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCCAGAAGACTGTTATCTaGAAGCTTCGGGCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFQKTVI*KLRALK
Trigger: TTTGAGAGCCCGAAGCTTCCAGATAACAGTCTTCTG...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCACTCTAACTCATATCTaGAAACTGTGTACAATGGGT +
Preference number: 2 (lower is better)
Translates to: YVVCLSLSQSRTALAYIITLTHI*KLCTMG
Trigger: ACCCATTGTACACAGTTTCCAGATATGAGTTAGAGT...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTACTGAGACCTTTCCAGTaGAATAAATTAGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLLRPFQ*NKLEQQ
Trigger: CTGCTGCTCTAATTTATTCCACTGGAAAGGTCTCAG...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR TCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCTATCAGCAAAACTGGTaGTGGCTACTGAAAAGATCC +
Preference number: 2 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFYQQNW*WLLKRS
Trigger: GGATCTTTTCAGTAGCCATCACCAGTTTTGCTGATA...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR TCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTAGATCCACAATCATGTTaGTGTTTCTATGGAGGATAC +
Preference number: 2 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLDPQSC*CFYGGY
Trigger: GTATCCTCCATAGAAACATCAACATGATTGTGGATC...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR TCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTACAAAGGAACTCTATGTaGCCACACAGAACTCTTTTA +
Preference number: 2 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLQRNSM*PHRTLL
Trigger: TAAAAGAGTTCTGTGTGGTCACATAGAGTTCCTTTG...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR GCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCACTAACCCAAAGGATTaGTACTTTGAAACAGTTTGT +
Preference number: 2 (lower is better)
Translates to: YVVCLSLSQSRTALAYIITNPKD*YFETVC
Trigger: ACAAACTGTTTCAAAGTAGCAATCCTTTGGGTTAGT...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR GCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCCCTGGATATTCTCTGTaGCACAATTTGCCTCTAGTT +
Preference number: 2 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFPGYSL*HNLPLV
Trigger: AACTAGAGGCAAATTGTGGCACAGAGAATATCCAGG...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCATCTATTTTATCACATaGATCTCCGTCTGTGCTCAA +
Preference number: 2 (lower is better)
Translates to: ASGSQISDIPITYHKNTSIYFIT*ISVCAQ
Trigger: TTGAGCACAGACGGAGATCCATGTGATAAAATAGAT...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCGCTAGCTTGCTAAAATaGGAGTTAACTCTAGAGCAA +
Preference number: 2 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGASLLK*ELTLEQ
Trigger: TTGCTCTAGAGTTAACTCCCATTTTAGCAAGCTAGC...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTAGCTAGCTTGCTAAAATaGGAGTTAACTCTAGAGCAA +
Preference number: 2 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLASLLK*ELTLEQ
Trigger: TTGCTCTAGAGTTAACTCCCATTTTAGCAAGCTAGC...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCATGAAGAGCCAAACCTaGAAAACAGTTAAGGAGTCC +
Preference number: 2 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFMKSQT*KTVKES
Trigger: GGACTCCTTAACTGTTTTCCAGGTTTGGCTCTTCAT...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR GCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCATGGATCTCCGTCTGTaGTCAAAATACCTAATGATA +
Preference number: 2 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGMDLRL*SKYLMI
Trigger: TATCATTAGGTATTTTGAGCACAGACGGAGATCCAT...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCATCTATTTTATCACATaGATCTCCGTCTGTGCTCAA +
Preference number: 2 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGIYFIT*ISVCAQ
Trigger: TTGAGCACAGACGGAGATCCATGTGATAAAATAGAT...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCCAGTCCTTCATTACATaGTTTATAGGTCTGGAAACA +
Preference number: 2 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGQSFIT*FIGLET
Trigger: TGTTTCCAGACCTATAAACCATGTAATGAAGGACTG...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTAATGTTGATGTTTCTATaGAGGATACTTCTAGCAGCT +
Preference number: 2 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLMLMFL*RILLAA
Trigger: AGCTGCTAGAAGTATCCTCCATAGAAACATCAACAT...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTATTAAGTCCTGAAAAGTaGGATGAAATCCCAAAGGAA +
Preference number: 2 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLLSPEK*DEIPKE
Trigger: TTCCTTTGGGATTTCATCCCACTTTTCAGGACTTAA...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR GCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCATGGATCTCCGTCTGTaGTCAAAATACCTAATGATA +
Preference number: 2 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFMDLRL*SKYLMI
Trigger: TATCATTAGGTATTTTGAGCACAGACGGAGATCCAT...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR GCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCACTAACCCAAAGGATTaGTACTTTGAAACAGTTTGT +
Preference number: 2 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGTNPKD*YFETVC
Trigger: ACAAACTGTTTCAAAGTAGCAATCCTTTGGGTTAGT...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR GCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCAAGAAACAAAGTGTATaGCAAACGAATTTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGKKQSV*QTNFSP
Trigger: AGGACTGAAATTCGTTTGGCATACACTTTGTTTCTT...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTAAGTTTGTACAACAAATaGGTTGTGAGGAAGTCTTAT +
Preference number: 2 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLSLYNK*VVRKSY
Trigger: ATAAGACTTCCTCACAACCCATTTGTTGTACAAACT...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCAGTTTGTACAACAAATaGGTTGTGAGGAAGTCTTAT +
Preference number: 2 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGSLYNK*VVRKSY
Trigger: ATAAGACTTCCTCACAACCCATTTGTTGTACAAACT...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGAGTTTGTACAACAAATaGGTTGTGAGGAAGTCTTAT +
Preference number: 2 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMSLYNK*VVRKSY
Trigger: ATAAGACTTCCTCACAACCCATTTGTTGTACAAACT...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCACTCTAACTCATATCTaGAAACTGTGTACAATGGGT +
Preference number: 2 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFTLTHI*KLCTMG
Trigger: ACCCATTGTACACAGTTTCCAGATATGAGTTAGAGT...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CAA 90 bp TTTTGGGCAACCTCTGACCTTTGGTGTAAGCACGGTACCAAAAATGGAGAAAGACCACCTGCAGCAAATTaGACTCCAAACCACCAGGTC +
Preference number: 3 (lower is better)
Translates to: FWATSDLWCKHGTKNGERPPAAN*TPNHQV
Trigger: GACCTGGTGGTTTGGAGTCAAATTTGCTGCAGGTGG...TCTTTCTCCATTTTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGCCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504455.5
3UTR CCA 72 bp ATACAGTCAATAAATGACAAAGCCAGGGCCTACAGGTaGTTTCCAGACTTTCCAGACCCAGCAGAAGGAATC +
Preference number: 3 (lower is better)
Translates to: IQSINDKARAYR*FPDFPDPAEGI
Trigger: GATTCCTTCTGCTGGGTCTGGAAAGTCTGGAAACCACCTGTAGGCCCTGGCTTTGTCATTTATTGACTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CAA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGTGTAATCCCAGAACTTaGGGAGGCCGAGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMCNPRT*GGRGGR
Trigger: CCTCCCACCTCGGCCTCCCAAAGTTCTGGGATTACA...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR GCA 72 bp CCCTGGATATTCTCTGTGCCACAATTTGCCTCTAGTTaGTTCACAGCCACTCTAACTCATATCTGGAAACTG +
Preference number: 3 (lower is better)
Translates to: PWIFSVPQFASS*FTATLTHIWKL
Trigger: CAGTTTCCAGATATGAGTTAGAGTGGCTGTGAAGCAACTAGAGGCAAATTGTGGCACAGAGAATATCCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR CCA 72 bp GCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCTaGAAGCTTCGGGCTCTCAAATATCAGACATCCCAA +
Preference number: 3 (lower is better)
Translates to: AAVGSNYQKTVI*KLRALKYQTSQ
Trigger: TTGGGATGTCTGATATTTGAGAGCCCGAAGCTTCCAGATAACAGTCTTCTGATAATTAGAGCCTACAGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR GCA 72 bp TGCTTACATAATCAATTTTCCCCTGGATATTCTCTGTaGCACAATTTGCCTCTAGTTGCTTCACAGCCACTC +
Preference number: 3 (lower is better)
Translates to: CLHNQFSPGYSL*HNLPLVASQPL
Trigger: GAGTGGCTGTGAAGCAACTAGAGGCAAATTGTGGCACAGAGAATATCCAGGGGAAAATTGATTATGTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CAA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCTTCACCTGTGCTAGCTaGCTAAAATGGGAGTTAACT +
Preference number: 3 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIFTCAS*LKWELT
Trigger: AGTTAACTCCCATTTTAGCAAGCTAGCACAGGTGAA...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CAA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCTCTCTGTGCCACAATTaGCCTCTAGTTGCTTCACAG +
Preference number: 3 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGSLCHN*PLVASQ
Trigger: CTGTGAAGCAACTAGAGGCAAATTGTGGCACAGAGA...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CAA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCTCTCTGTGCCACAATTaGCCTCTAGTTGCTTCACAG +
Preference number: 3 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFSLCHN*PLVASQ
Trigger: CTGTGAAGCAACTAGAGGCAAATTGTGGCACAGAGA...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR TCA 72 bp TGCTACTTTGAAACAGTTTGTACAACAAATGGGTTGTaGGGAAGTCTTATCAGCAAAACTGGTGATGGCTAC +
Preference number: 3 (lower is better)
Translates to: CYFETVCTTNGL*GSLISKTGDGY
Trigger: GTAGCCATCACCAGTTTTGCTGATAAGACTTCCTCACAACCCATTTGTTGTACAAACTGTTTCAAAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CAA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCTTCACCTGTGCTAGCTaGCTAAAATGGGAGTTAACT +
Preference number: 3 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGFTCAS*LKWELT
Trigger: AGTTAACTCCCATTTTAGCAAGCTAGCACAGGTGAA...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CAA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTATGGTCTCTATACTACTaGGGTTCTTTGGAAATGGTG +
Preference number: 3 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLWSLYY*GSLEMV
Trigger: CACCATTTCCAAAGAACCCAAGTAGTATAGAGACCA...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CAA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGTGGTCTCTATACTACTaGGGTTCTTTGGAAATGGTG +
Preference number: 3 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMWSLYY*GSLEMV
Trigger: CACCATTTCCAAAGAACCCAAGTAGTATAGAGACCA...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR TCA 72 bp CTGAAAAGTGGGATGAAATCCCAAAGGAACTCTATGTaGCCACACAGAACTCTTTTAATAAATATGGCCCAT +
Preference number: 3 (lower is better)
Translates to: LKSGMKSQRNSM*PHRTLLINMAH
Trigger: ATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTCCTTTGGGATTTCATCCCACTTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR CCA 72 bp GCCTCTAGTTGCTTCACAGCCACTCTAACTCATATCTaGAAACTGTGTACAATGGGTAATATTATTTATGAT +
Preference number: 3 (lower is better)
Translates to: ASSCFTATLTHI*KLCTMGNIIYD
Trigger: ATCATAAATAATATTACCCATTGTACACAGTTTCCAGATATGAGTTAGAGTGGCTGTGAAGCAACTAGAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR CCA 72 bp CATGAAACTGTAACTCATAATGATGCACGCAAAGACTaGAAACTGATACTTGCAATCCTCCATGAAAAAGAA +
Preference number: 3 (lower is better)
Translates to: HETVTHNDARKD*KLILAILHEKE
Trigger: TTCTTTTTCATGGAGGATTGCAAGTATCAGTTTCCAGTCTTTGCGTGCATCATTATGAGTTACAGTTTCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504455.5
3UTR-3UTR CAA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGTATTTTTGCCTCATTTaGGTCTCTATACTACTTGGG +
Preference number: 3 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMYFCLI*VSILLG
Trigger: CCCAAGTAGTATAGAGACCAAAATGAGGCAAAAATA...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
3UTR-3UTR CAA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTATATTTTTGCCTCATTTaGGTCTCTATACTACTTGGG +
Preference number: 3 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLYFCLI*VSILLG
Trigger: CCCAAGTAGTATAGAGACCAAAATGAGGCAAAAATA...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCAGAGAGGGCGGCGACTaGCAGCGCGAGCGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFREGGD*QRERGA
Trigger: AGCTCCGCGCTCGCGCTGCCAGTCGCCGCCCTCTCT...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425382.5
ENST00000508821.6
CDS-3UTR CCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCAGAGAGGGCGGCGACTaGCAGCGCGAGCGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIREGGD*QRERGA
Trigger: AGCTCCGCGCTCGCGCTGCCAGTCGCCGCCCTCTCT...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425382.5
ENST00000508821.6
CDS-3UTR TCA 90 bp CATTTTTCACAGTTTTGGGCAACCTCTGACCTTTGGTGTAAGCACGGTACCAAAGCAGAGGCGAGGACATaGGGAGCCAATCTTCAACTC +
Preference number: 4 (lower is better)
Translates to: HFSQFWATSDLWCKHGTKAEART*GANLQL
Trigger: GAGTTGAAGATTGGCTCCTCATGTCCTCGCCTCTGC...TTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGCCCAAAACTGTGAAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR TCA 90 bp TCCTCAAAGCTGTGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATGCAGAGGCGAGGACATaGGGAGCCAATCTTCAACTC +
Preference number: 4 (lower is better)
Translates to: SSKLWVTVNSQQCHIEMNAEART*GANLQL
Trigger: GAGTTGAAGATTGGCTCCTCATGTCCTCGCCTCTGC...ATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAGCTTTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504455.5
ENST00000514809.1
CDS-3UTR TCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCGCAGAGGCGAGGACATaGGGAGCCAATCTTCAACTC +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIAEART*GANLQL
Trigger: GAGTTGAAGATTGGCTCCTCATGTCCTCGCCTCTGC...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TTTTGGGCAACCTCTGACCTTTGGTGTAAGCACGGTACCAAAAATGGAGAAAGAGCTTGCGATTTTCCATaGGCTTTGGTCCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FWATSDLWCKHGTKNGERACDFP*ALVPRK
Trigger: CTTCCTTGGGACCAAAGCTCATGGAAAATCGCAAGC...TCTTTCTCCATTTTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGCCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCGCCAGGGCCTACAGGTaGTTTCCAGACTTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIARAYR*FPDFPD
Trigger: GTCTGGAAAGTCTGGAAACCACCTGTAGGCCCTGGC...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACCTATACCCCGCTTGCGATTTTCCATaGGCTTTGGTCCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: WVTVNSQQCHIEMNNLYPACDFP*ALVPRK
Trigger: CTTCCTTGGGACCAAAGCTCATGGAAAATCGCAAGC...GGGGTATAGGTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504455.5
ENST00000514809.1
CDS-3UTR TCA 90 bp TCAAAGCTGTGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACCACCTGCAGCAAATTTaGCTCCAAACCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SKLWVTVNSQQCHIEMNNHLQQI*LQTTRS
Trigger: GGACCTGGTGGTTTGGAGTCAAATTTGCTGCAGGTG...GTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR TCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCCACCTGCAGCAAATTTaGCTCCAAACCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIHLQQI*LQTTRS
Trigger: GGACCTGGTGGTTTGGAGTCAAATTTGCTGCAGGTG...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR GCA 90 bp ACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACCTATACCCCAGCCAGGTAGGCTGGCCCCAATaGAGAAAGTCCATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: TVNSQQCHIEMNNLYPSQVGWPQ*RKSIVG
Trigger: TCCTACTATGGACTTTCTGCATTGGGGCCAGCCTAC...CTGGCTGGGGTATAGGTTATTCATTTCGATGTGACATTGTTGACTATTCACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CCA 90 bp CTGTGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACCTATACAGAATCCTAGGAGGATaGTTTGTGGCAGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LWVTVNSQQCHIEMNNLYRILGG*FVAEAR
Trigger: CCTCGCCTCTGCCACAAACCATCCTCCTAGGATTCT...GTATAGGTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504455.5
ENST00000514809.1
CDS-3UTR CCA 90 bp AGTCAACAATGTCACATCGAAATGAATAACCTATACCCCAGCCAGACATCACAAAGAATCCTAGGAGGATaGTTTGTGGCAGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SQQCHIEMNNLYPSQTSQRILGG*FVAEAR
Trigger: CCTCGCCTCTGCCACAAACCATCCTCCTAGGATTCT...TTGTGATGTCTGGCTGGGGTATAGGTTATTCATTTCGATGTGACATTGTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514809.1
CDS-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCGCCAGGGCCTACAGGTaGTTTCCAGACTTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSARAYR*FPDFPD
Trigger: GTCTGGAAAGTCTGGAAACCACCTGTAGGCCCTGGC...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCAGCTCGAGACCAGCCTaGCCAACCCTGTCTCTACTA +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSSSRPA*PTLSLL
Trigger: TAGTAGAGACAGGGTTGGCCAGGCTGGTCTCGAGCT...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCGTAATCCCAGAACTTTaGGAGGCCGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSVIPEL*EAEVGG
Trigger: TCCTCCCACCTCGGCCTCCCAAAGTTCTGGGATTAC...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTAGCAGAGGCGAGGACATaGGGAGCCAATCTTCAACTC +
Preference number: 4 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLAEART*GANLQL
Trigger: GAGTTGAAGATTGGCTCCTCATGTCCTCGCCTCTGC...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCCACCTGCAGCAAATTTaGCTCCAAACCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSHLQQI*LQTTRS
Trigger: GGACCTGGTGGTTTGGAGTCAAATTTGCTGCAGGTG...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000425382.5
ENST00000504455.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR GCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCGTAGGCTGGCCCCAATaGAGAAAGTCCATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIVGWPQ*RKSIVG
Trigger: TCCTACTATGGACTTTCTGCATTGGGGCCAGCCTAC...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCAGAATCCTAGGAGGATaGTTTGTGGCAGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSRILGG*FVAEAR
Trigger: CCTCGCCTCTGCCACAAACCATCCTCCTAGGATTCT...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000425382.5
ENST00000504455.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACCTATACCCCCCATCCTCAAAGCTGTaGGTGACCGTGAATAGTCAA +
Preference number: 4 (lower is better)
Translates to: WVTVNSQQCHIEMNNLYPPSSKL*VTVNSQ
Trigger: TTGACTATTCACGGTCACCCACAGCTTTGAGGATGG...GGGGTATAGGTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000504455.5
ENST00000514809.1
CDS-3UTR CCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCATACTTCTGGTAGGCTaGCCCCAATGCAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIILLVG*PQCRKS
Trigger: GGACTTTCTGCATTGGGGCCAGCCTACCAGAAGTAT...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp AAATTTGGAGAAGTAATAAAGCCAGCAGGTACGTGCCATCCTCAAAGCTGTGGGGATGCACGCAAAGACTaGAAACTGATACTTGCAATC +
Preference number: 4 (lower is better)
Translates to: KFGEVIKPAGTCHPQSCGDARKD*KLILAI
Trigger: GATTGCAAGTATCAGTTTCCAGTCTTTGCGTGCATC...CCCACAGCTTTGAGGATGGCACGTACCTGCTGGCTTTATTACTTCTCCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CCA 90 bp AAACTGATACTTGCAATCCTCCATGAAAAAGAACTGGCTTATGTGGATGGCGACGCAACCTCTGACCTTTaGTGTAAGCACGGTACCAAA +
Preference number: 4 (lower is better)
Translates to: KLILAILHEKELAYVDGDATSDL*CKHGTK
Trigger: TTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGC...GTCGCCATCCACATAAGCCAGTTCTTTTTCATGGAGGATTGCAAGTATCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CCA 90 bp AAATTTGGAGAAGTAATAAAGCCAGCAGGTACGTGCCATCCTCAAAGCTGTGGGCATTTTTCACAGTTTTaGGCAACCTCTGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: KFGEVIKPAGTCHPQSCGHFSQF*ATSDLW
Trigger: CCAAAGGTCAGAGGTTGCCCAAAACTGTGAAAAATG...CCCACAGCTTTGAGGATGGCACGTACCTGCTGGCTTTATTACTTCTCCAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGGTAATCCCAGAACTTTaGGAGGCCGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMVIPEL*EAEVGG
Trigger: TCCTCCCACCTCGGCCTCCCAAAGTTCTGGGATTAC...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCGCTTGCGATTTTCCATaGGCTTTGGTCCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSACDFP*ALVPRK
Trigger: CTTCCTTGGGACCAAAGCTCATGGAAAATCGCAAGC...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000425382.5
ENST00000504455.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TCAAAGCTGTGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACACCAGGTCCACGGCATaGTGGTATGATGGAATACAT +
Preference number: 4 (lower is better)
Translates to: SKLWVTVNSQQCHIEMNNTRSTA*WYDGIH
Trigger: ATGTATTCCATCATACCATCATGCCGTGGACCTGGT...GTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAGCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR TCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCCACCTGCAGCAAATTTaGCTCCAAACCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGHLQQI*LQTTRS
Trigger: GGACCTGGTGGTTTGGAGTCAAATTTGCTGCAGGTG...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTAGACAGGAGAATCACTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLDRRIT*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGTC...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCGACAGGAGAATCACTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGDRRIT*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGTC...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCAGAATCCTAGGAGGATaGTTTGTGGCAGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGRILGG*FVAEAR
Trigger: CCTCGCCTCTGCCACAAACCATCCTCCTAGGATTCT...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTAAGAATCCTAGGAGGATaGTTTGTGGCAGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLRILGG*FVAEAR
Trigger: CCTCGCCTCTGCCACAAACCATCCTCCTAGGATTCT...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TTTGGGCAACCTCTGACCTTTGGTGTAAGCACGGTACCAAAAATGGAGAAAGAGATTTTCCATGAGCTTTaGTCCCAAGGAAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: FGQPLTFGVSTVPKMEKEIFHEL*SQGSDK
Trigger: TTTGTCACTTCCTTGGGACCAAAGCTCATGGAAAAT...CTCTTTCTCCATTTTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGCCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CCA 90 bp AAATTTGGAGAAGTAATAAAGCCAGCAGGTACGTGCCATCCTCAAAGCTGTGGGATTTTCCATGAGCTTTaGTCCCAAGGAAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: KFGEVIKPAGTCHPQSCGIFHEL*SQGSDK
Trigger: TTTGTCACTTCCTTGGGACCAAAGCTCATGGAAAAT...CCCACAGCTTTGAGGATGGCACGTACCTGCTGGCTTTATTACTTCTCCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504455.5
ENST00000514809.1
CDS-3UTR CCA 90 bp TTGCAATCCTCCATGAAAAAGAACTGGCTTATGTGGATGGCGACAATAACAAACCCATCCTCAAAGCTGTaGGTGACCGTGAATAGTCAA +
Preference number: 4 (lower is better)
Translates to: LQSSMKKNWLMWMATITNPSSKL*VTVNSQ
Trigger: TTGACTATTCACGGTCACCCACAGCTTTGAGGATGG...GTTTGTTATTGTCGCCATCCACATAAGCCAGTTCTTTTTCATGGAGGATTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCATACTTCTGGTAGGCTaGCCCCAATGCAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSILLVG*PQCRKS
Trigger: GGACTTTCTGCATTGGGGCCAGCCTACCAGAAGTAT...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000425382.5
ENST00000504455.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCGCAACCTCTGACCTTTaGTGTAAGCACGGTACCAAA +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIATSDL*CKHGTK
Trigger: TTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGC...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCAGCTCGAGACCAGCCTaGCCAACCCTGTCTCTACTA +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFSSRPA*PTLSLL
Trigger: TAGTAGAGACAGGGTTGGCCAGGCTGGTCTCGAGCT...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCGCTTGCGATTTTCCATaGGCTTTGGTCCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGACDFP*ALVPRK
Trigger: CTTCCTTGGGACCAAAGCTCATGGAAAATCGCAAGC...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp CATTTTTCACAGTTTTGGGCAACCTCTGACCTTTGGTGTAAGCACGGTACCAAATTATCATTGCTTTCTTaGGTTCAAAGGGCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: HFSQFWATSDLWCKHGTKLSLLS*VQRACD
Trigger: ATCGCAAGCCCTTTGAACTCAAGAAAGCAATGATAA...TTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGCCCAAAACTGTGAAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR TCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCGCAAAGACTGGAAACTaGTACTTGCAATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIAKTGN*YLQSSM
Trigger: CATGGAGGATTGCAAGTATCAGTTTCCAGTCTTTGC...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR GCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCGTAGGCTGGCCCCAATaGAGAAAGTCCATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGVGWPQ*RKSIVG
Trigger: TCCTACTATGGACTTTCTGCATTGGGGCCAGCCTAC...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGATACTTCTGGTAGGCTaGCCCCAATGCAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMILLVG*PQCRKS
Trigger: GGACTTTCTGCATTGGGGCCAGCCTACCAGAAGTAT...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp ACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACCTATACCCCAGCCAGTTATCATTGCTTTCTTaGGTTCAAAGGGCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: TVNSQQCHIEMNNLYPSQLSLLS*VQRACD
Trigger: ATCGCAAGCCCTTTGAACTCAAGAAAGCAATGATAA...CTGGCTGGGGTATAGGTTATTCATTTCGATGTGACATTGTTGACTATTCACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504455.5
ENST00000514809.1
CDS-3UTR TCA 90 bp CTGTGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACCTATACAATGTCACATCGAAATaGATAACCTATACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LWVTVNSQQCHIEMNNLYNVTSK*ITYTPA
Trigger: GGCTGGGGTATAGGTTATTCATTTCGATGTGACATT...GTATAGGTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504455.5
ENST00000514809.1
CDS-3UTR TCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTAACCAGGTCCACGGCATaGTGGTATGATGGAATACAT +
Preference number: 4 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLTRSTA*WYDGIH
Trigger: ATGTATTCCATCATACCATCATGCCGTGGACCTGGT...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGACCAGGTCCACGGCATaGTGGTATGATGGAATACAT +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMTRSTA*WYDGIH
Trigger: ATGTATTCCATCATACCATCATGCCGTGGACCTGGT...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCGCAAAGACTGGAAACTaGTACTTGCAATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSAKTGN*YLQSSM
Trigger: CATGGAGGATTGCAAGTATCAGTTTCCAGTCTTTGC...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000425382.5
ENST00000504455.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCTCTTTGGAAATGGTGTaGTTTCTAACAGCACCTAGC +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIISLEMV*FLTAPS
Trigger: GCTAGGTGCTGTTAGAAATCACACCATTTCCAAAGA...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR GCA 90 bp CTGTGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACCTATACTGTTCCCAAACCACCTaGAGCAAATTTGACTCCAAA +
Preference number: 4 (lower is better)
Translates to: LWVTVNSQQCHIEMNNLYCSQTT*SKFDSK
Trigger: TTTGGAGTCAAATTTGCTGCAGGTGGTTTGGGAACA...GTATAGGTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR GCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCGTAGGCTGGCCCCAATaGAGAAAGTCCATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIVGWPQ*RKSIVG
Trigger: TCCTACTATGGACTTTCTGCATTGGGGCCAGCCTAC...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGCCATCCTCAAAGCTGTaGGTGACCGTGAATAGTCAA +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMPSSKL*VTVNSQ
Trigger: TTGACTATTCACGGTCACCCACAGCTTTGAGGATGG...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TCAAAGCTGTGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACGTATTTAGAAGGGCATaGAATGTTCCCAAACCACCT +
Preference number: 4 (lower is better)
Translates to: SKLWVTVNSQQCHIEMNNVFRRA*NVPKPP
Trigger: AGGTGGTTTGGGAACATTCCATGCCCTTCTAAATAC...GTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAGCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CCA 90 bp TCCTCAAAGCTGTGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATGCGACAATAACAAACTaGACAAGCTGTAATGATGTC +
Preference number: 4 (lower is better)
Translates to: SSKLWVTVNSQQCHIEMNATITN*TSCNDV
Trigger: GACATCATTACAGCTTGTCCAGTTTGTTATTGTCGC...ATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAGCTTTGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CCA 90 bp TGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACCTATACCCCAAGAACTGGCTTATGTaGATGGCGACAATAACAAAC +
Preference number: 4 (lower is better)
Translates to: WVTVNSQQCHIEMNNLYPKNWLM*MATITN
Trigger: GTTTGTTATTGTCGCCATCCACATAAGCCAGTTCTT...GGGGTATAGGTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CCA 90 bp TCAAAGCTGTGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACTCCATGAAAAAGAACTaGCTTATGTGGATGGCGACA +
Preference number: 4 (lower is better)
Translates to: SKLWVTVNSQQCHIEMNNSMKKN*LMWMAT
Trigger: TGTCGCCATCCACATAAGCCAGTTCTTTTTCATGGA...GTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAGCTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCGCAACCTCTGACCTTTaGTGTAAGCACGGTACCAAA +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGATSDL*CKHGTK
Trigger: TTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGC...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCATGAAGAGCCAAACCTaGAAAACAGTTAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIMKSQT*KTVKES
Trigger: GGACTCCTTAACTGTTTTCCAGGTTTGGCTCTTCAT...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCTTATCATTGCTTTCTTaGGTTCAAAGGGCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIILSLLS*VQRACD
Trigger: ATCGCAAGCCCTTTGAACTCAAGAAAGCAATGATAA...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCACCAGGTCCACGGCATaGTGGTATGATGGAATACAT +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFTRSTA*WYDGIH
Trigger: ATGTATTCCATCATACCATCATGCCGTGGACCTGGT...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGACAGTTAAGGAGTCCTaGGACCTTTCCAGTGGAATA +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMTVKES*DLSSGI
Trigger: TATTCCACTGGAAAGGTCTCAGGACTCCTTAACTGT...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCTCTTTGGAAATGGTGTaGTTTCTAACAGCACCTAGC +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSSLEMV*FLTAPS
Trigger: GCTAGGTGCTGTTAGAAATCACACCATTTCCAAAGA...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp CTGTGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACCTATACAAAATTCTTTCAGTCTaGTGGTGGGAAGGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LWVTVNSQQCHIEMNNLYKILSV*WWEGLL
Trigger: AAGAAGACCTTCCCACCATCAGACTGAAAGAATTTT...GTATAGGTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514809.1
CDS-3UTR GCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGAGGTGCCAAGAGGTGTaGATTTCCTTCCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMRCQEV*ISFLNL
Trigger: CAAATTCAGGAAGGAAATGCACACCTCTTGGCACCT...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505959.5
CDS-3UTR GCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCTTCATCTGTGGTAGGTaGCAAGAGGTGTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFFICGR*QEVCIS
Trigger: GGAAATGCACACCTCTTGGCACCTACCACAGATGAA...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505959.5
CDS-3UTR CCA 90 bp TCAAAGCTGTGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACCCAATCTTCAACTCTTaGATCAGCATCTTTGATCCA +
Preference number: 4 (lower is better)
Translates to: SKLWVTVNSQQCHIEMNNPIFNS*ISIFDP
Trigger: TGGATCAAAGATGCTGATCCAAGAGTTGAAGATTGG...GTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAGCTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504455.5
ENST00000514809.1
CDS-3UTR CCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCCCATCCTCAAAGCTGTaGGTGACCGTGAATAGTCAA +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIPSSKL*VTVNSQ
Trigger: TTGACTATTCACGGTCACCCACAGCTTTGAGGATGG...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCGCGACAATAACAAACTaGACAAGCTGTAATGATGTC +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIATITN*TSCNDV
Trigger: GACATCATTACAGCTTGTCCAGTTTGTTATTGTCGC...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCGCAACCTCTGACCTTTaGTGTAAGCACGGTACCAAA +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIATSDL*CKHGTK
Trigger: TTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGC...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCCAGAAGACTGTTATCTaGAAGCTTCGGGCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGQKTVI*KLRALK
Trigger: TTTGAGAGCCCGAAGCTTCCAGATAACAGTCTTCTG...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGCAGAAGACTGTTATCTaGAAGCTTCGGGCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMQKTVI*KLRALK
Trigger: TTTGAGAGCCCGAAGCTTCCAGATAACAGTCTTCTG...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCATGAAGAGCCAAACCTaGAAAACAGTTAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSMKSQT*KTVKES
Trigger: GGACTCCTTAACTGTTTTCCAGGTTTGGCTCTTCAT...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCGCAAAGACTGGAAACTaGTACTTGCAATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIAKTGN*YLQSSM
Trigger: CATGGAGGATTGCAAGTATCAGTTTCCAGTCTTTGC...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCTATCAGCAAAACTGGTaGTGGCTACTGAAAAGATCC +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGYQQNW*WLLKRS
Trigger: GGATCTTTTCAGTAGCCATCACCAGTTTTGCTGATA...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCACAGTTAAGGAGTCCTaGGACCTTTCCAGTGGAATA +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVITVKES*DLSSGI
Trigger: TATTCCACTGGAAAGGTCTCAGGACTCCTTAACTGT...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR GCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCTGTTCCCAAACCACCTaGAGCAAATTTGACTCCAAA +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGCSQTT*SKFDSK
Trigger: TTTGGAGTCAAATTTGCTGCAGGTGGTTTGGGAACA...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR GCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTACCTGGATATTCTCTGTaGCACAATTTGCCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLPGYSL*HNLPLV
Trigger: AACTAGAGGCAAATTGTGGCACAGAGAATATCCAGG...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR GCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGCCTGGATATTCTCTGTaGCACAATTTGCCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMPGYSL*HNLPLV
Trigger: AACTAGAGGCAAATTGTGGCACAGAGAATATCCAGG...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCATTTTCCATGAGCTTTaGTCCCAAGGAAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSIFHEL*SQGSDK
Trigger: TTTGTCACTTCCTTGGGACCAAAGCTCATGGAAAAT...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000425382.5
ENST00000504455.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGGTATTTAGAAGGGCATaGAATGTTCCCAAACCACCT +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMVFRRA*NVPKPP
Trigger: AGGTGGTTTGGGAACATTCCATGCCCTTCTAAATAC...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCTCCATGAAAAAGAACTaGCTTATGTGGATGGCGACA +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGSMKKN*LMWMAT
Trigger: TGTCGCCATCCACATAAGCCAGTTCTTTTTCATGGA...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGGATGCACGCAAAGACTaGAAACTGATACTTGCAATC +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMDARKD*KLILAI
Trigger: GATTGCAAGTATCAGTTTCCAGTCTTTGCGTGCATC...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCGATGCACGCAAAGACTaGAAACTGATACTTGCAATC +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGDARKD*KLILAI
Trigger: GATTGCAAGTATCAGTTTCCAGTCTTTGCGTGCATC...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCCATTTTTCACAGTTTTaGGCAACCTCTGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGHFSQF*ATSDLW
Trigger: CCAAAGGTCAGAGGTTGCCCAAAACTGTGAAAAATG...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTACATTTTTCACAGTTTTaGGCAACCTCTGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLHFSQF*ATSDLW
Trigger: CCAAAGGTCAGAGGTTGCCCAAAACTGTGAAAAATG...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCCAGTCCTTCATTACATaGTTTATAGGTCTGGAAACA +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIQSFIT*FIGLET
Trigger: TGTTTCCAGACCTATAAACCATGTAATGAAGGACTG...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCCTGAGACCTTTCCAGTaGAATAAATTAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGLRPFQ*NKLEQQ
Trigger: CTGCTGCTCTAATTTATTCCACTGGAAAGGTCTCAG...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCATGTTGATGTTTCTATaGAGGATACTTCTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIMLMFL*RILLAA
Trigger: AGCTGCTAGAAGTATCCTCCATAGAAACATCAACAT...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCTTAAGTCCTGAAAAGTaGGATGAAATCCCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIILSPEK*DEIPKE
Trigger: TTCCTTTGGGATTTCATCCCACTTTTCAGGACTTAA...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTATTGGTCCCAAGGAAGTaGCAAAATAGACATAGAATC +
Preference number: 4 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLLVPRK*QNRHRI
Trigger: GATTCTATGTCTATTTTGTCACTTCCTTGGGACCAA...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCTTATCATTGCTTTCTTaGGTTCAAAGGGCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGLSLLS*VQRACD
Trigger: ATCGCAAGCCCTTTGAACTCAAGAAAGCAATGATAA...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCAATGTCACATCGAAATaGATAACCTATACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVINVTSK*ITYTPA
Trigger: GGCTGGGGTATAGGTTATTCATTTCGATGTGACATT...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCTATCAGCAAAACTGGTaGTGGCTACTGAAAAGATCC +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIYQQNW*WLLKRS
Trigger: GGATCTTTTCAGTAGCCATCACCAGTTTTGCTGATA...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCTCTTTGGAAATGGTGTaGTTTCTAACAGCACCTAGC +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFSLEMV*FLTAPS
Trigger: GCTAGGTGCTGTTAGAAATCACACCATTTCCAAAGA...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGGATCCACAATCATGTTaGTGTTTCTATGGAGGATAC +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMDPQSC*CFYGGY
Trigger: GTATCCTCCATAGAAACATCAACATGATTGTGGATC...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGCAAAGGAACTCTATGTaGCCACACAGAACTCTTTTA +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMQRNSM*PHRTLL
Trigger: TAAAAGAGTTCTGTGTGGTCACATAGAGTTCCTTTG...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCCAAAGGAACTCTATGTaGCCACACAGAACTCTTTTA +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGQRNSM*PHRTLL
Trigger: TAAAAGAGTTCTGTGTGGTCACATAGAGTTCCTTTG...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR GCA 90 bp TCAAAGCTGTGGGTGACCGTGAATAGTCAACAATGTCACATCGAAATGAATAACATTGTACGTTATCATTaGTTTCTTGAGTTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SKLWVTVNSQQCHIEMNNIVRYH*FLEFKG
Trigger: CCCTTTGAACTCAAGAAAGCAATGATAACGTACAAT...GTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAGCTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514809.1
CDS-3UTR GCA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCAAGAAACAAAGTGTATaGCAAACGAATTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIKKQSV*QTNFSP
Trigger: AGGACTGAAATTCGTTTGGCATACACTTTGTTTCTT...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR GCA 90 bp TTGCAATCCTCCATGAAAAAGAACTGGCTTATGTGGATGGCGACAATAACAAACTCACAAAGTTATCATTaGTTTCTTGAGTTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LQSSMKKNWLMWMATITNSQSYH*FLEFKG
Trigger: CCCTTTGAACTCAAGAAAGCAATGATAACTTTGTGA...GTTTGTTATTGTCGCCATCCACATAAGCCAGTTCTTTTTCATGGAGGATTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGCCAATCTTCAACTCTTaGATCAGCATCTTTGATCCA +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMPIFNS*ISIFDP
Trigger: TGGATCAAAGATGCTGATCCAAGAGTTGAAGATTGG...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425382.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGATTTTCCATGAGCTTTaGTCCCAAGGAAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMIFHEL*SQGSDK
Trigger: TTTGTCACTTCCTTGGGACCAAAGCTCATGGAAAAT...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCGTATTTAGAAGGGCATaGAATGTTCCCAAACCACCT +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFVFRRA*NVPKPP
Trigger: AGGTGGTTTGGGAACATTCCATGCCCTTCTAAATAC...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCGTATTTAGAAGGGCATaGAATGTTCCCAAACCACCT +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIVFRRA*NVPKPP
Trigger: AGGTGGTTTGGGAACATTCCATGCCCTTCTAAATAC...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGGCGACAATAACAAACTaGACAAGCTGTAATGATGTC +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMATITN*TSCNDV
Trigger: GACATCATTACAGCTTGTCCAGTTTGTTATTGTCGC...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGAAGAACTGGCTTATGTaGATGGCGACAATAACAAAC +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMKNWLM*MATITN
Trigger: GTTTGTTATTGTCGCCATCCACATAAGCCAGTTCTT...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCAAGAACTGGCTTATGTaGATGGCGACAATAACAAAC +
Preference number: 4 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGKNWLM*MATITN
Trigger: GTTTGTTATTGTCGCCATCCACATAAGCCAGTTCTT...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCTCCATGAAAAAGAACTaGCTTATGTGGATGGCGACA +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFSMKKN*LMWMAT
Trigger: TGTCGCCATCCACATAAGCCAGTTCTTTTTCATGGA...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCGATGCACGCAAAGACTaGAAACTGATACTTGCAATC +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFDARKD*KLILAI
Trigger: GATTGCAAGTATCAGTTTCCAGTCTTTGCGTGCATC...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCCATTTTTCACAGTTTTaGGCAACCTCTGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIHFSQF*ATSDLW
Trigger: CCAAAGGTCAGAGGTTGCCCAAAACTGTGAAAAATG...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCCTGAGACCTTTCCAGTaGAATAAATTAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVILRPFQ*NKLEQQ
Trigger: CTGCTGCTCTAATTTATTCCACTGGAAAGGTCTCAG...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCATGAAGAGCCAAACCTaGAAAACAGTTAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIMKSQT*KTVKES
Trigger: GGACTCCTTAACTGTTTTCCAGGTTTGGCTCTTCAT...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTATGGGTTCAAAACTTATaGGATGCCACAAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLWVQNL*DATKAV
Trigger: AACTGCTTTTGTGGCATCCCATAAGTTTTGAACCCA...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCGATCCACAATCATGTTaGTGTTTCTATGGAGGATAC +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFDPQSC*CFYGGY
Trigger: GTATCCTCCATAGAAACATCAACATGATTGTGGATC...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR TCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCGATCCACAATCATGTTaGTGTTTCTATGGAGGATAC +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIDPQSC*CFYGGY
Trigger: GTATCCTCCATAGAAACATCAACATGATTGTGGATC...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR GCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCATTGTACGTTATCATTaGTTTCTTGAGTTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSIVRYH*FLEFKG
Trigger: CCCTTTGAACTCAAGAAAGCAATGATAACGTACAAT...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR GCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGATGGATCTCCGTCTGTaGTCAAAATACCTAATGATA +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMMDLRL*SKYLMI
Trigger: TATCATTAGGTATTTTGAGCACAGACGGAGATCCAT...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCCCAATCTTCAACTCTTaGATCAGCATCTTTGATCCA +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFPIFNS*ISIFDP
Trigger: TGGATCAAAGATGCTGATCCAAGAGTTGAAGATTGG...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425382.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCGCGACAATAACAAACTaGACAAGCTGTAATGATGTC +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFATITN*TSCNDV
Trigger: GACATCATTACAGCTTGTCCAGTTTGTTATTGTCGC...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCAAGAACTGGCTTATGTaGATGGCGACAATAACAAAC +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIKNWLM*MATITN
Trigger: GTTTGTTATTGTCGCCATCCACATAAGCCAGTTCTT...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGATCTATTTTATCACATaGATCTCCGTCTGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMIYFIT*ISVCAQ
Trigger: TTGAGCACAGACGGAGATCCATGTGATAAAATAGAT...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCGCTAGCTTGCTAAAATaGGAGTTAACTCTAGAGCAA +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIASLLK*ELTLEQ
Trigger: TTGCTCTAGAGTTAACTCCCATTTTAGCAAGCTAGC...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCAGTTTGTACAACAAATaGGTTGTGAGGAAGTCTTAT +
Preference number: 4 (lower is better)
Translates to: ASGSQISDIPITYHKNTSSLYNK*VVRKSY
Trigger: ATAAGACTTCCTCACAACCCATTTGTTGTACAAACT...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGTTAAGTCCTGAAAAGTaGGATGAAATCCCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMLSPEK*DEIPKE
Trigger: TTCCTTTGGGATTTCATCCCACTTTTCAGGACTTAA...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCATCTATTTTATCACATaGATCTCCGTCTGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFIYFIT*ISVCAQ
Trigger: TTGAGCACAGACGGAGATCCATGTGATAAAATAGAT...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCATGTTGATGTTTCTATaGAGGATACTTCTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFMLMFL*RILLAA
Trigger: AGCTGCTAGAAGTATCCTCCATAGAAACATCAACAT...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCTTAAGTAGCAGGTACTaGCTCAAAGAGTACATCTTT +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVILSSRY*LKEYIF
Trigger: AAAGATGTACTCTTTGAGCCAGTACCTGCTACTTAA...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505959.5
3UTR CAA 72 bp GGAAGACAATGTATCAGTTTCGATCATAGACTTATGTaGGGCTTCAATTATCTTTGTTTTTGCAAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: GRQCISFDHRLM*GFNYLCFCKFH
Trigger: ATGGAACTTGCAAAAACAAAGATAATTGAAGCCCAACATAAGTCTATGATCGAAACTGATACATTGTCTTCC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR GCA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCATTGTACGTTATCATTaGTTTCTTGAGTTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFIVRYH*FLEFKG
Trigger: CCCTTTGAACTCAAGAAAGCAATGATAACGTACAAT...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR GCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCACTAACCCAAAGGATTaGTACTTTGAAACAGTTTGT +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVITNPKD*YFETVC
Trigger: ACAAACTGTTTCAAAGTAGCAATCCTTTGGGTTAGT...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CCA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCAAGAAGAAAGAACCTTaGCATTCCTCAAAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: KQKQILAAVGSNYQKTVIKKKEP*HSSKEK
Trigger: TTTTTCCTTTGAGGAATGCCAAGGTTCTTTCTTCTT...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505959.5
CDS GCA 90 bp AACTTATGGGATGCCACAAAAGCAGTTCTAAGAGGGAAGTTTAAATaGCGCACAGGGAGCGGAGCCGAAGCGCCGGGCGCGCGCGGGAGA +
Preference number: 5 (lower is better)
Translates to: NLWDATKAVLRGKFK*RTGSGAEAPGARGR
Trigger: TCTCCCGCGCGCGCCCGGCGCTTCGGCTCCGCTCCCTGTGCGGCATTTAAACTTCCCTCTTAGAACTGCTTTTGTGGCATCCCATAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp TTTGGGCAACCTCTGACCTTTGGTGTAAGCACGGTACCAAAAATGGAGAAAGAGCCACCTGCAGCAAATTaGACTCCAAACCACCAGGTC +
Preference number: 5 (lower is better)
Translates to: FGQPLTFGVSTVPKMEKEPPAAN*TPNHQV
Trigger: GACCTGGTGGTTTGGAGTCAAATTTGCTGCAGGTGG...CTCTTTCTCCATTTTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGCCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CAA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCTGTAATCCCAGAACTTaGGGAGGCCGAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ASGSQISDIPITYHKNTSCNPRT*GGRGGR
Trigger: CCTCCCACCTCGGCCTCCCAAAGTTCTGGGATTACA...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCTGTAATCCCAGAACTTaGGGAGGCCGAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFCNPRT*GGRGGR
Trigger: CCTCCCACCTCGGCCTCCCAAAGTTCTGGGATTACA...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp TTTTGGGCAACCTCTGACCTTTGGTGTAAGCACGGTACCAAAAATGGAGAAAGATTGAGTTCAAAGGGCTaGCGATTTTCCATGAGCTTT +
Preference number: 5 (lower is better)
Translates to: FWATSDLWCKHGTKNGERLSSKG*RFSMSF
Trigger: AAAGCTCATGGAAAATCGCAAGCCCTTTGAACTCAA...TCTTTCTCCATTTTTGGTACCGTGCTTACACCAAAGGTCAGAGGTTGCCCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504455.5
CDS-3UTR CAA 90 bp TATAGGCAAGTTAAACATTTTAAAGACTACAGGGAGGTTAGGAGAGGTTGTATGCCACCTGCAGCAAATTaGACTCCAAACCACCAGGTC +
Preference number: 5 (lower is better)
Translates to: YRQVKHFKDYREVRRGCMPPAAN*TPNHQV
Trigger: GACCTGGTGGTTTGGAGTCAAATTTGCTGCAGGTGG...CATACAACCTCTCCTAACCTCCCTGTAGTCTTTAAAATGTTTAACTTGCCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCTCTCTGTGCCACAATTaGCCTCTAGTTGCTTCACAG +
Preference number: 5 (lower is better)
Translates to: YVVCLSLSQSRTALAYIISLCHN*PLVASQ
Trigger: CTGTGAAGCAACTAGAGGCAAATTGTGGCACAGAGA...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCCCACCTGCAGCAAATTaGACTCCAAACCACCAGGTC +
Preference number: 5 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFPPAAN*TPNHQV
Trigger: GACCTGGTGGTTTGGAGTCAAATTTGCTGCAGGTGG...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS GCA 90 bp AACTTATGGGATGCCACAAAAGCAGTTCTAAGAGGGAAGTTTAAATaGCTTTTATATCTGGGACGACTGCTTGAAGTTCCTAAGTATCGC +
Preference number: 5 (lower is better)
Translates to: NLWDATKAVLRGKFK*LLYLGRLLEVPKYR
Trigger: GCGATACTTAGGAACTTCAAGCAGTCGTCCCAGATATAAAAGGCATTTAAACTTCCCTCTTAGAACTGCTTTTGTGGCATCCCATAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507047.5
CDS-3UTR CAA 90 bp AGTCAACAATGTCACATCGAAATGAATAACCTATACCCCAGCCAGACATCACAATTGAGTTCAAAGGGCTaGCGATTTTCCATGAGCTTT +
Preference number: 5 (lower is better)
Translates to: SQQCHIEMNNLYPSQTSQLSSKG*RFSMSF
Trigger: AAAGCTCATGGAAAATCGCAAGCCCTTTGAACTCAA...TTGTGATGTCTGGCTGGGGTATAGGTTATTCATTTCGATGTGACATTGTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514809.1
CDS-3UTR CAA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCTGGTCTCTATACTACTaGGGTTCTTTGGAAATGGTG +
Preference number: 5 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIWSLYY*GSLEMV
Trigger: CACCATTTCCAAAGAACCCAAGTAGTATAGAGACCA...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS GCA 90 bp AACTTATGGGATGCCACAAAAGCAGTTCTAAGAGGGAAGTTTAAATaGCTTTTATATCTGGGACGACTGCTTGAAGTTCCTAAGTATCTG +
Preference number: 5 (lower is better)
Translates to: NLWDATKAVLRGKFK*LLYLGRLLEVPKYL
Trigger: CAGATACTTAGGAACTTCAAGCAGTCGTCCCAGATATAAAAGGCATTTAAACTTCCCTCTTAGAACTGCTTTTGTGGCATCCCATAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511799.5
CDS-3UTR CAA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCTGGTCTCTATACTACTaGGGTTCTTTGGAAATGGTG +
Preference number: 5 (lower is better)
Translates to: ASGSQISDIPITYHKNTSWSLYY*GSLEMV
Trigger: CACCATTTCCAAAGAACCCAAGTAGTATAGAGACCA...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTATTGAGTTCAAAGGGCTaGCGATTTTCCATGAGCTTT +
Preference number: 5 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLLSSKG*RFSMSF
Trigger: AAAGCTCATGGAAAATCGCAAGCCCTTTGAACTCAA...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp TATGTAGTCTGTCTGTCTCTCTCTCAAAGTAGAACAGCCCTTGCTTACATAATCTATTTTTGCCTCATTTaGGTCTCTATACTACTTGGG +
Preference number: 5 (lower is better)
Translates to: YVVCLSLSQSRTALAYIIYFCLI*VSILLG
Trigger: CCCAAGTAGTATAGAGACCAAAATGAGGCAAAAATA...GATTATGTAAGCAAGGGCTGTTCTACTTTGAGAGAGAGACAGACAGACTACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp GCTTCGGGCTCTCAAATATCAGACATCCCAATAACTTACCATAAAAATACAAGCTGTTGTTGTTGTTGCTaGTTAGGTAAGCAAACCCAA +
Preference number: 5 (lower is better)
Translates to: ASGSQISDIPITYHKNTSCCCCC*LGKQTQ
Trigger: TTGGGTTTGCTTACCTAACAAGCAACAACAACAACA...GCTTGTATTTTTATGGTAAGTTATTGGGATGTCTGATATTTGAGAGCCCGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCTTGAGTTCAAAGGGCTaGCGATTTTCCATGAGCTTT +
Preference number: 5 (lower is better)
Translates to: KQKQILAAVGSNYQKTVILSSKG*RFSMSF
Trigger: AAAGCTCATGGAAAATCGCAAGCCCTTTGAACTCAA...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp GAACTCTATGTGACCACACAGAACTCTTTTAATAAATATGGCCCATACAAATTCTTGAGTTCAAAGGGCTaGCGATTTTCCATGAGCTTT +
Preference number: 5 (lower is better)
Translates to: ELYVTTQNSFNKYGPYKFLSSKG*RFSMSF
Trigger: AAAGCTCATGGAAAATCGCAAGCCCTTTGAACTCAA...GAATTTGTATGGGCCATATTTATTAAAAGAGTTCTGTGTGGTCACATAGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCTGTTGTTGTTGTTGCTaGTTAGGTAAGCAAACCCAA +
Preference number: 5 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGCCCCC*LGKQTQ
Trigger: TTGGGTTTGCTTACCTAACAAGCAACAACAACAACA...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS GCA 90 bp TGTAAATTTGACTATAATTTCATCTGTGGTAGGTGCCAAGAGGTGTaGATTTCCTTCCTGAATTTGGTAGACTTGCAATTTCTAGTTGAT +
Preference number: 5 (lower is better)
Translates to: CKFDYNFICGRCQEV*ISFLNLVDLQFLVD
Trigger: ATCAACTAGAAATTGCAAGTCTACCAAATTCAGGAAGGAAATGCACACCTCTTGGCACCTACCACAGATGAAATTATAGTCAAATTTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505959.5
CDS-3UTR CAA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCTATTTTTGCCTCATTTaGGTCTCTATACTACTTGGG +
Preference number: 5 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGYFCLI*VSILLG
Trigger: CCCAAGTAGTATAGAGACCAAAATGAGGCAAAAATA...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp AAACAAAAACAAATTCTGGCTGCTGTAGGCTCTAATTATCAGAAGACTGTTATCTGTTGTTGTTGTTGCTaGTTAGGTAAGCAAACCCAA +
Preference number: 5 (lower is better)
Translates to: KQKQILAAVGSNYQKTVICCCCC*LGKQTQ
Trigger: TTGGGTTTGCTTACCTAACAAGCAACAACAACAACA...GATAACAGTCTTCTGATAATTAGAGCCTACAGCAGCCAGAATTTGTTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425382.5
ENST00000505959.5
ENST00000508821.6
CDS-3UTR CAA 90 bp CAGGGAAAAACAAACTCAAACTTTGACAACATCCACAGAATGTTCCAGTCTTTACTGAATTTGGTAGACTaGCAATTTCTAGTTGATAGG +
Preference number: 5 (lower is better)
Translates to: QGKTNSNFDNIHRMFQSLLNLVD*QFLVDR
Trigger: CCTATCAACTAGAAATTGCAAGTCTACCAAATTCAG...TAAAGACTGGAACATTCTGTGGATGTTGTCAAAGTTTGAGTTTGTTTTTCCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505959.5
CDS-3UTR CAA 90 bp TTACTGTACACAGAGTACAATAAGTATCTCTGTGTGTTCAAAATTAACTGGGGCTCAAAGGAAAAACTGTaGGGAACACTTTTAGTGAGA +
Preference number: 5 (lower is better)
Translates to: LLYTEYNKYLCVFKINWGSKEKL*GTLLVR
Trigger: TCTCACTAAAAGTGTTCCCAACAGTTTTTCCTTTGA...GCCCCAGTTAATTTTGAACACACAGAGATACTTATTGTACTCTGTGTACAGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000505959.5
CDS GCA 72 bp GATGCCACAAAAGCAGTTCTAAGAGGGAAGTTTAAATaGCGCACAGGGAGCGGAGCCGAAGCGCCGGGCGCG +
Preference number: 6 (lower is better)
Translates to: DATKAVLRGKFK*RTGSGAEAPGA
Trigger: CGCGCCCGGCGCTTCGGCTCCGCTCCCTGTGCGGCATTTAAACTTCCCTCTTAGAACTGCTTTTGTGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505959.5
ENST00000508821.6
CDS TCA 72 bp ATCCTAGGAGGATGGTTTGTGGCAGAGGCGAGGACATaGGGAGCCAATCTTCAACTCTTGGATCAGCATCTT +
Preference number: 6 (lower is better)
Translates to: ILGGWFVAEART*GANLQLLDQHL
Trigger: AAGATGCTGATCCAAGAGTTGAAGATTGGCTCCTCATGTCCTCGCCTCTGCCACAAACCATCCTCCTAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000425382.5
ENST00000504455.5
ENST00000507047.5
ENST00000508821.6
ENST00000511799.5
ENST00000514809.1
CDS CAA 72 bp GGAAGTTTAAATGCCTTTTATATCTGGGACGACTGCTaGAAGTTCCTAAGTATCGCACAGGGAGCGGAGCCG +
Preference number: 6 (lower is better)
Translates to: GSLNAFYIWDDC*KFLSIAQGAEP
Trigger: CGGCTCCGCTCCCTGTGCGATACTTAGGAACTTCAAGCAGTCGTCCCAGATATAAAAGGCATTTAAACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507047.5
CDS TCA 72 bp ATCCTAGGAGGATGGTTTGTGGCAGAGGCGAGGACATaGGGAGCCAATCTTCAACTCTTGGATATAGAATAT +
Preference number: 6 (lower is better)
Translates to: ILGGWFVAEART*GANLQLLDIEY
Trigger: ATATTCTATATCCAAGAGTTGAAGATTGGCTCCTCATGTCCTCGCCTCTGCCACAAACCATCCTCCTAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505959.5
CDS GCA 72 bp GATGCCACAAAAGCAGTTCTAAGAGGGAAGTTTAAATaGCTTTTATATCTGGGACGACTGCTTGAAGTTCCT +
Preference number: 6 (lower is better)
Translates to: DATKAVLRGKFK*LLYLGRLLEVP
Trigger: AGGAACTTCAAGCAGTCGTCCCAGATATAAAAGGCATTTAAACTTCCCTCTTAGAACTGCTTTTGTGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507047.5
ENST00000511799.5
CDS GCA 72 bp GACTATAATTTCATCTGTGGTAGGTGCCAAGAGGTGTaGATTTCCTTCCTGAATTTGGTAGACTTGCAATTT +
Preference number: 6 (lower is better)
Translates to: DYNFICGRCQEV*ISFLNLVDLQF
Trigger: AAATTGCAAGTCTACCAAATTCAGGAAGGAAATGCACACCTCTTGGCACCTACCACAGATGAAATTATAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505959.5
CDS CAA 72 bp GGAAGTTTAAATGCCTTTTATATCTGGGACGACTGCTaGAAGTTCCTAAGTATCTGGGACGACAAAACAACA +
Preference number: 6 (lower is better)
Translates to: GSLNAFYIWDDC*KFLSIWDDKTT
Trigger: TGTTGTTTTGTCGTCCCAGATACTTAGGAACTTCAAGCAGTCGTCCCAGATATAAAAGGCATTTAAACTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511799.5
CDS GCA 72 bp CGTTGTAAATTTGACTATAATTTCATCTGTGGTAGGTaGCAAGAGGTGTGCATTTCCTTCCTGAATTTGGTA +
Preference number: 6 (lower is better)
Translates to: RCKFDYNFICGR*QEVCISFLNLV
Trigger: TACCAAATTCAGGAAGGAAATGCACACCTCTTGGCACCTACCACAGATGAAATTATAGTCAAATTTACAACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505959.5
CDS CAA 72 bp GGAAAAACTGTTGGGAACACTTTTAGTGAGATAAATTaGGTCTTTAGTAGTCTGCTGAGAAAGCTGCAAATG +
Preference number: 6 (lower is better)
Translates to: GKTVGNTFSEIN*VFSSLLRKLQM
Trigger: CATTTGCAGCTTTCTCAGCAGACTACTAAAGACCAAATTTATCTCACTAAAAGTGTTCCCAACAGTTTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505959.5
CDS CAA 90 bp CTGCAAATGATGAAACAGTGTATCTTTGCTGAAATCGTTGTAAATTaGACTATAATTTCATCTGTGGTAGGTGCCAAGAGGTGTGCATTT +
Preference number: 6 (lower is better)
Translates to: LQMMKQCIFAEIVVN*TIISSVVGAKRCAF
Trigger: AAATGCACACCTCTTGGCACCTACCACAGATGAAATTATAGTCAAATTTACAACGATTTCAGCAAAGATACACTGTTTCATCATTTGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505959.5
CDS CAA 90 bp TTCCTCAAAGGAAAAACTGTTGGGAACACTTTTAGTGAGATAAATTaGGTCTTTAGTAGTCTGCTGAGAAAGCTGCAAATGATGAAACAG +
Preference number: 6 (lower is better)
Translates to: FLKGKTVGNTFSEIN*VFSSLLRKLQMMKQ
Trigger: CTGTTTCATCATTTGCAGCTTTCTCAGCAGACTACTAAAGACCAAATTTATCTCACTAAAAGTGTTCCCAACAGTTTTTCCTTTGAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505959.5