RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELOVL6 (Homo sapiens)

Ensembl gene IDs: ENSG00000170522

Ensembl transcript IDs: ENST00000302274.8, ENST00000394607.7, ENST00000503885.1, ENST00000506461.1, ENST00000506625.5, ENST00000507451.1, ENST00000513003.1, ENST00000514184.5

Found 407 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCATGTGCCCTGTACCGGCCTCTTTAGCTATGAGTTGTGCCATATaGCTCGCAGATGTTTATAACTGGAGTCTGTCACAACAGCATTCA +
Preference number: 1 (lower is better)
Translates to: CMCPVPASLAMSCAI*LADVYNWSLSQQHS
Trigger: TGAATGCTGTTGTGACAGACTCCAGTTATAAACATCTGCGAGCCATATGGCACAACTCATAGCTAAAGAGGCCGGTACAGGGCACATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 90 bp CACATCACTTCCTTTAAAAAGTGTCAATCAGGAGGAAGGGAAGCCTaGGAATTCCCCCTGCCATCTGTGAGCTCTGAATTGTCAAAGTCT +
Preference number: 1 (lower is better)
Translates to: HITSFKKCQSGGREA*EFPLPSVSSELSKS
Trigger: AGACTTTGACAATTCAGAGCTCACAGATGGCAGGGGGAATTCTCAGGCTTCCCTTCCTCCTGATTGACACTTTTTAAAGGAAGTGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 90 bp GTTCGGGTGCTTTGCTTAGCACAAATGCATAAGCCCAGAATTTGCTaGCAGGTCCATTGTAAAAACCCTGGTCACAAACTGACTGCTTCA +
Preference number: 1 (lower is better)
Translates to: VRVLCLAQMHKPRIC*QVHCKNPGHKLTAS
Trigger: TGAAGCAGTCAGTTTGTGACCAGGGTTTTTACAATGGACCTGTCAGCAAATTCTGGGCTTATGCATTTGTGCTAAGCAAAGCACCCGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514184.5
3UTR CCA 90 bp TTTTGTGTAAGTCTTGGACACCAGCATACAGAGGCTGTTGCTCATTaGCAAACTGGGACCTACCCCTTCATACTGATTGTCGGAACAAAA +
Preference number: 1 (lower is better)
Translates to: FCVSLGHQHTEAVAH*QTGTYPFILIVGTK
Trigger: TTTTGTTCCGACAATCAGTATGAAGGGGTAGGTCCCAGTTTGCCAATGAGCAACAGCCTCTGTATGCTGGTGTCCAAGACTTACACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR GCA 90 bp CTGCCCAAGTTTTTCTGGAATGTTAACTGGCAGCAGGATTATCTATaGAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGGGCCA +
Preference number: 1 (lower is better)
Translates to: LPKFFWNVNWQQDYL*SSQFSGRFQICHGP
Trigger: TGGCCCATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATTCCAGAAAAACTTGGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CCA 90 bp CACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATCTTaGCAAAGTCTCTTCCTGATAGCAATGAGTCTGAGGCACAAAGAA +
Preference number: 1 (lower is better)
Translates to: HFNVYTLLAKCGGGS*QSLFLIAMSLRHKE
Trigger: TTCTTTGTGCCTCAGACTCATTGCTATCAGGAAGAGACTTTGCCAAGATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 90 bp TCTACAAGAGGTGGACATGGACCATGCTTATACAACTTAAAGCTCTaGACTCTGAGAGGCAAAGTCTATTTGTTCTCTACTCTCCTCACA +
Preference number: 1 (lower is better)
Translates to: STRGGHGPCLYNLKL*TLRGKVYLFSTLLT
Trigger: TGTGAGGAGAGTAGAGAACAAATAGACTTTGCCTCTCAGAGTTCAGAGCTTTAAGTTGTATAAGCATGGTCCATGTCCACCTCTTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CCA 90 bp GCAGCTATAAAAACTTGCCTGCCCAAGTTTTTCTGGAATGTTAACTaGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTT +
Preference number: 1 (lower is better)
Translates to: AAIKTCLPKFFWNVN*QQDYLCSSQFSGRF
Trigger: AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATTCCAGAAAAACTTGGGCAGGCAAGTTTTTATAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CCA 90 bp TTAGCCCAAGAACAATGCTTTCACCATAGTAGGATCGGGATGCAGTaGAAAATCTTCAATAGAAAGATACTCTATTGCAGCATAGTGGGG +
Preference number: 1 (lower is better)
Translates to: LAQEQCFHHSRIGMQ*KIFNRKILYCSIVG
Trigger: CCCCACTATGCTGCAATAGAGTATCTTTCTATTGAAGATTTTCCACTGCATCCCGATCCTACTATGGTGAAAGCATTGTTCTTGGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 90 bp GTGAGCTCTGAATTGTCAAAGTCTCTGAGGATGAGGAAAGTAACTTaGTTCAACAGGTTTGTGTATGTTCTTCAAAGCTCTGTGCATGTG +
Preference number: 1 (lower is better)
Translates to: VSSELSKSLRMRKVT*FNRFVYVLQSSVHV
Trigger: CACATGCACAGAGCTTTGAAGAACATACACAAACCTGTTGAATCAAGTTACTTTCCTCATCCTCAGAGACTTTGACAATTCAGAGCTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR GCA 90 bp ATCAGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTaGTCACAATCATTTAACATAGATGTAACAGCTTTCCTCCCCTGC +
Preference number: 1 (lower is better)
Translates to: ISCVSPMNQHQDIID*SQSFNIDVTAFLPC
Trigger: GCAGGGGAGGAAAGCTGTTACATCTATGTTAAATGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CCA 90 bp TTAACCAGTTACTTCAGAAGAGGTTACTACAATGCAGTGTTGGTTTaGACGTCTAGTGAAATATATTTTACTGTGAGACTTCTGCCTGCC +
Preference number: 1 (lower is better)
Translates to: LTSYFRRGYYNAVLV*TSSEIYFTVRLLPA
Trigger: GGCAGGCAGAAGTCTCACAGTAAAATATATTTCACTAGACGTCCAAACCAACACTGCATTGTAGTAACCTCTTCTGAAGTAACTGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 90 bp ACAATGACTCACAGCATGAACATAGGCTTTACGATCATCCTAAATTaGGAGCAAGGTATTTATTATCGAAAACAGAGACTGGAGAAAGAC +
Preference number: 1 (lower is better)
Translates to: TMTHSMNIGFTIILN*EQGIYYRKQRLEKD
Trigger: GTCTTTCTCCAGTCTCTGTTTTCGATAATAAATACCTTGCTCTCAATTTAGGATGATCGTAAAGCCTATGTTCATGCTGTGAGTCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTGGCGGGTGGATCCCCTaGGGTCAGGAGCTCGAGACC +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTGGWIP*GQELET
Trigger: GGTCTCGAGCTCCTGACCTCAGGGGATCCACCCGCC...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTGCTGCCTCGGTTGTGTaGCACACACCGTGGTCTCTG +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTAASVV*HTPWSL
Trigger: CAGAGACCACGGTGTGTGTCACACAACCGAGGCAGC...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTTCTAGATCGCGCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTSRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTAGA...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTGAGGCTGTTGCTCATTaGCAAACTGGGACCTACCCC +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTEAVAH*QTGTYP
Trigger: GGGGTAGGTCCCAGTTTGCCAATGAGCAACAGCCTC...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CAA 90 bp ACTGTGAGACTTCTGCCTGCCCAGCCTAAAATCAAAGTGCCACTTTaGAGCTCTCCCAAGCCCCACTCACGAATGTGCTCCCACTGTCCA +
Preference number: 2 (lower is better)
Translates to: TVRLLPAQPKIKVPL*SSPKPHSRMCSHCP
Trigger: TGGACAGTGGGAGCACATTCGTGAGTGGGGCTTGGGAGAGCTCAAAAGTGGCACTTTGATTTTAGGCTGGGCAGGCAGAAGTCTCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTCTCCTCACAGCCTCTTaGATCAGACCTTGGCCAATC +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTLLTAS*IRPWPI
Trigger: GATTGGCCAAGGTCTGATTCAAGAGGCTGTGAGGAG...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTACACACCGTGGTCTCTaGGTAGAGGCTGTACTATCA +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTTHRGL*VEAVLS
Trigger: TGATAGTACAGCCTCTACTCAGAGACCACGGTGTGT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGGAGGAAGGGAAGCCTaGGAATTCCCCCTGCCATCT +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSGGREA*EFPLPS
Trigger: AGATGGCAGGGGGAATTCTCAGGCTTCCCTTCCTCC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTAAAGCCCTCAGAATATaGCCTAGCTGCCTCGGTTGT +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTKALRI*PSCLGC
Trigger: ACAACCGAGGCAGCTAGGGCATATTCTGAGGGCTTT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTAAGGATGGGAGTAAGTaGCTTCGAATAACCACCTCA +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTKDGSK*LRITTS
Trigger: TGAGGTGGTTATTCGAAGTCACTTACTCCCATCCTT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTCTCCTCACAGCCTCTTaGATCAGACCTTGGCCAATC +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSLLTAS*IRPWPI
Trigger: GATTGGCCAAGGTCTGATTCAAGAGGCTGTGAGGAG...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAGTCAGAACCCTTCATaGCCGGCCCGAATGGGTTAT +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSSQNPS*PARMGY
Trigger: ATAACCCATTCGGGCCGGCCATGAAGGGTTCTGACT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTCATTTCTTCCAGTCATaGCTTGGTTTGCATGGATTC +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTHFFQS*LGLHGF
Trigger: GAATCCATGCAAACCAAGTCATGACTGGAAGAAATG...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTAAATATATTTTACTGTaGGACTTCTGCCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTKYILL*DFCLPS
Trigger: GCTGGGCAGGCAGAAGTCTCACAGTAAAATATATTT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTGCAGCTATAAAAACTTaGCTGCCCAAGTTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTAAIKT*LPKFFW
Trigger: CCAGAAAAACTTGGGCAGGCAAGTTTTTATAGCTGC...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTTTTAGCTATGAGTTGTaGCATATGGCTCGCAGATGT +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTFSYEL*HMARRC
Trigger: ACATCTGCGAGCCATATGGCACAACTCATAGCTAAA...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTGGATTCTTTGTTCACTaGTCAAACCATTCACACAGA +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTGFFVH*SNHSHR
Trigger: TCTGTGTGAATGGTTTGAGCAGTGAACAAAGAATCC...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATAAAATTAGCTGGGTGTaGTGGCGGGCGCCTGTAACC +
Preference number: 2 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDKISWV*WRAPVT
Trigger: GGTTACAGGCGCCCGCCACCACACCCAGCTAATTTT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTACTACATTTGACTACTaGGACATTCTGGGTGCTTAT +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTTTFDY*DILGAY
Trigger: ATAAGCACCCAGAATGTCCCAGTAGTCAAATGTAGT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTACTGGCCAAATGTGGTaGTGGATCTTGGCAAAGTCT +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSTGQMW*WILAKS
Trigger: AGACTTTGCCAAGATCCACCACCACATTTGGCCAGT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTACTACTGGCCAAATGTaGTGGTGGATCTTGGCAAAG +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSTTGQM*WWILAK
Trigger: CTTTGCCAAGATCCACCACCACATTTGGCCAGTAGT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTGCAGATGTTTATAACTaGAGTCTGTCACAACAGCAT +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTADVYN*SLSQQH
Trigger: ATGCTGTTGTGACAGACTCCAGTTATAAACATCTGC...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTACTACAATGCAGTGTTaGTTTGGACGTCTAGTGAAA +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTTTMQC*FGRLVK
Trigger: TTTCACTAGACGTCCAAACCAACACTGCATTGTAGT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CAA 90 bp GTTTTGTGTAAGTCTTGGACACCAGCATACAGAGGCTGTTGCTCATaGGCAAACTGGGACCTACCCCTTCATACTGATTGTCGGAACAAA +
Preference number: 2 (lower is better)
Translates to: VLCKSWTPAYRGCCS*ANWDLPLHTDCRNK
Trigger: TTTGTTCCGACAATCAGTATGAAGGGGTAGGTCCCAGTTTGCCAATGAGCAACAGCCTCTGTATGCTGGTGTCCAAGACTTACACAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTTTAAAGCGGCTAAGCTaGGATGTTAAAAACAGTGTA +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTLKRLS*DVKNSV
Trigger: TACACTGTTTTTAACATCTCAGCTTAGCCGCTTTAA...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAAGGATGGGAGTAAGTaGCTTCGAATAACCACCTCA +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSKDGSK*LRITTS
Trigger: TGAGGTGGTTATTCGAAGTCACTTACTCCCATCCTT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATAGCTATTTGGGAGGCTaGGGCAGGAGAATTGCTGGA +
Preference number: 2 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDSYLGG*GRRIAG
Trigger: TCCAGCAATTCTCCTGCCTCAGCCTCCCAAATAGCT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGAAAGACACTACATTTaGCTACTGGGACATTCTGGG +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSERHYI*LLGHSG
Trigger: CCCAGAATGTCCCAGTAGTCAAATGTAGTGTCTTTC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTCAAAATAGAGCATTGTaGTTTCATCAGCTCTCACTT +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTQNRAL*FHQLSL
Trigger: AAGTGAGAGCTGATGAAATCACAATGCTCTATTTTG...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTAGTCATGACTTGGTTTaGATGGATTCTTTGTTCACT +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTSHDLV*MDSLFT
Trigger: AGTGAACAAAGAATCCATGCAAACCAAGTCATGACT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTCTTCCGTTTCTAACCTaGATTAAGAGATCTGCAATA +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTLPFLT*IKRSAI
Trigger: TATTGCAGATCTCTTAATGCAGGTTAGAAACGGAAG...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTATAGTAGGATCGGGATaGAGTGGAAAATCTTCAATA +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTIVGSG*SGKSSI
Trigger: TATTGAAGATTTTCCACTGCATCCCGATCCTACTAT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTTTGGTACTTTGGCCTTaGGTTAGATGTAATATGGTA +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTLVLWP*VRCNMV
Trigger: TACCATATTACATCTAACGCAAGGCCAAAGTACCAA...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp AGAGTACAGGAGCACAGTGATGTGGTGATACCAGTGCAGGAAGATCAGCTTCTGCTAGTTCGGGTGCTTTaGTTAGCACAAATGCATAAG +
Preference number: 2 (lower is better)
Translates to: RVQEHSDVVIPVQEDQLLLVRVL*LAQMHK
Trigger: CTTATGCATTTGTGCTAAGCAAAGCACCCGAACTAG...CAGAAGCTGATCTTCCTGCACTGGTATCACCACATCACTGTGCTCCTGTACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514184.5
3UTR-3UTR CCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTATCGAAAACAGAGACTaGAGAAAGACACTACATTTG +
Preference number: 2 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTIENRD*RKTLHL
Trigger: CAAATGTAGTGTCTTTCTCCAGTCTCTGTTTTCGAT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTTTTCGAACAGCCCTGTaGTTTCCTTTTGGAATTCAC +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSFRTAL*FPFGIH
Trigger: GTGAATTCCAAAAGGAAATCACAGGGCTGTTCGAAA...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTTACAACTTAAAGCTCTaGACTCTGAGAGGCAAAGTC +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSYNLKL*TLRGKV
Trigger: GACTTTGCCTCTCAGAGTTCAGAGCTTTAAGTTGTA...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATCCTCTGCTTCTGGCTTaGTTTTGTTCTCCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDPLLLA*FCSPLS
Trigger: GGACAAGGGAGAACAAAAGCAAGCCAGAAGCAGAGG...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAGAAAGATACTCTATTaGAGCATAGTGGGGCAGCTA +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSRKILY*SIVGQL
Trigger: TAGCTGCCCCACTATGCTGCAATAGAGTATCTTTCT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATAGAATATGCCCTAGCTaGCTCGGTTGTGTGACACAC +
Preference number: 2 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDRICPS*LGCVTH
Trigger: GTGTGTCACACAACCGAGGCAGCTAGGGCATATTCT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGGTGGACATGGACCATaGTTATACAACTTAAAGCTC +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSGGHGP*LYNLKL
Trigger: GAGCTTTAAGTTGTATAAGCATGGTCCATGTCCACC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAGTGTCTACAAGAGGTaGACATGGACCATGCTTATA +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSSVYKR*TWTMLI
Trigger: TATAAGCATGGTCCATGTCCACCTCTTGTAGACACT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTATGTTTCAAAAGCTGTaGGAGACAATGACTCACAGC +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSMFQKL*ETMTHS
Trigger: GCTGTGAGTCATTGTCTCCCACAGCTTTTGAAACAT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTATGTGTATACACTACTaGCCAAATGTGGTGGTGGAT +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSMCIHY*PNVVVD
Trigger: ATCCACCACCACATTTGGCCAGTAGTGTATACACAT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CAA 90 bp CACAACAGCATTCAAGAAAATGCTGTGACTGCACTGACACTTGTTTaGTGTAAGTCTTGGACACCAGCATACAGAGGCTGTTGCTCATTG +
Preference number: 2 (lower is better)
Translates to: HNSIQENAVTALTLV*CKSWTPAYRGCCSL
Trigger: CAATGAGCAACAGCCTCTGTATGCTGGTGTCCAAGACTTACACAAAACAAGTGTCAGTGCAGTCACAGCATTTTCTTGAATGCTGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp AAGATCAGCTTCTGCTTCCTCAGAATAATGAATATTGTATCTCCTAGTTCGGGTACCCTGGTCACAAACTaGCTGCTTCAGGCCTTTGGT +
Preference number: 2 (lower is better)
Translates to: KISFCFLRIMNIVSPSSGTLVTN*LLQAFG
Trigger: ACCAAAGGCCTGAAGCAGTCAGTTTGTGACCAGGGT...ACCCGAACTAGGAGATACAATATTCATTATTCTGAGGAAGCAGAAGCTGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514184.5
3UTR-3UTR GCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAGAAAATGCTGTGACTaGACTGACACTTGTTTTGTG +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSRKCCD*TDTCFV
Trigger: CACAAAACAAGTGTCAGTGCAGTCACAGCATTTTCT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTCTTCCAGTCATGACTTaGTTTGCATGGATTCTTTGT +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSLPVMT*FAWILC
Trigger: ACAAAGAATCCATGCAAACCAAGTCATGACTGGAAG...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTCAGATGAGCCTCCAATaGGTCCTTCAATTAAATTCA +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSQMSLQ*VLQLNS
Trigger: TGAATTTAATTGAAGGACCCATTGGAGGCTCATCTG...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTTACAAGAGGTGGACATaGACCATGCTTATACAACTT +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSYKRWT*TMLIQL
Trigger: AAGTTGTATAAGCATGGTCCATGTCCACCTCTTGTA...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTACTACATTTGACTACTaGGACATTCTGGGTGCTTAT +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSTTFDY*DILGAY
Trigger: ATAAGCACCCAGAATGTCCCAGTAGTCAAATGTAGT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGCAGATGTTTATAACTaGAGTCTGTCACAACAGCAT +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSADVYN*SLSQQH
Trigger: ATGCTGTTGTGACAGACTCCAGTTATAAACATCTGC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTATGAGTTGTGCCATATaGCTCGCAGATGTTTATAAC +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSMSCAI*LADVYN
Trigger: GTTATAAACATCTGCGAGCCATATGGCACAACTCAT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATATCTGTCTGTCGAATTaGTCTTCGGCTCACCTCTTT +
Preference number: 2 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDICLSN*SSAHLF
Trigger: AAAGAGGTGAGCCGAAGATCAATTCGACAGACAGAT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTTTTGTTACTCTGATGTaGCAGGCTTTACCTTATGAA +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSFVTLM*QALPYE
Trigger: TTCATAAGGTAAAGCCTGTCACATCAGAGTAACAAA...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCACCTCTGCTTCTGGCTTaGTTTTGTTCTCCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSPLLLA*FCSPLS
Trigger: GGACAAGGGAGAACAAAAGCAAGCCAGAAGCAGAGG...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGTTTTCAGCCAAACTTaGCTTGAAGTTTGTTGTAGT +
Preference number: 2 (lower is better)
Translates to: QATSCLNMSRQADLFETSVFSQT*LEVCCS
Trigger: ACTACAACAAACTTCAAGGCAAGTTTGGCTGAAAAC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATATCCCTAAGCTGCCTTaGGTTTTGTGTTTGCTCATG +
Preference number: 2 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDIPKLP*VLCLLM
Trigger: CATGAGCAAACACAAAACCCAAGGCAGCTTAGGGAT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGATCTGTCTGTCGAATTaGTCTTCGGCTCACCTCTTT +
Preference number: 2 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMICLSN*SSAHLF
Trigger: AAAGAGGTGAGCCGAAGATCAATTCGACAGACAGAT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGATTAAATCAACCAGATaGGCCTCCAATGGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMIKSTR*ASNGSF
Trigger: GAAGGACCCATTGGAGGCTCATCTGGTTGATTTAAT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTATTAAATCAACCAGATaGGCCTCCAATGGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFIKSTR*ASNGSF
Trigger: GAAGGACCCATTGGAGGCTCATCTGGTTGATTTAAT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGATCCCTAAGCTGCCTTaGGTTTTGTGTTTGCTCATG +
Preference number: 2 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMIPKLP*VLCLLM
Trigger: CATGAGCAAACACAAAACCCAAGGCAGCTTAGGGAT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATTTCATTGCAAACTCATaGACTTGGCTTGATGCTCAG +
Preference number: 2 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDFIANS*TWLDAQ
Trigger: CTGAGCATCAAGCCAAGTCCATGAGTTTGCAATGAA...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATAGTGTCTACAAGAGGTaGACATGGACCATGCTTATA +
Preference number: 2 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDSVYKR*TWTMLI
Trigger: TATAAGCATGGTCCATGTCCACCTCTTGTAGACACT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATTTTCTGAAGCTGACTTaGAGCAGGATGAATATCTTC +
Preference number: 2 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDFLKLT*SRMNIF
Trigger: GAAGATATTCATCCTGCTTCAAGTCAGCTTCAGAAA...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGCATTTCTTCCAGTCATaGCTTGGTTTGCATGGATTC +
Preference number: 2 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMHFFQS*LGLHGF
Trigger: GAATCCATGCAAACCAAGTCATGACTGGAAGAAATG...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATGTGCGTGTAATCTATaGAGTGTGGAAGCCCCTAAT +
Preference number: 2 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSCACNL*SVEAPN
Trigger: ATTAGGGGCTTCCACACTGCATAGATTACACGCACA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATCTTCCAGTCATGACTTaGTTTGCATGGATTCTTTGT +
Preference number: 2 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDLPVMT*FAWILC
Trigger: ACAAAGAATCCATGCAAACCAAGTCATGACTGGAAG...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATTACAAGAGGTGGACATaGACCATGCTTATACAACTT +
Preference number: 2 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDYKRWT*TMLIQL
Trigger: AAGTTGTATAAGCATGGTCCATGTCCACCTCTTGTA...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CAA 90 bp CCACTCCCCATTTCTTCCAGTCATGACTTGGTTTGCATGGATTCTTaGTTCACTGCTCAAACCATTCACACAGAATGGAATAAAACTTTA +
Preference number: 2 (lower is better)
Translates to: PLPISSSHDLVCMDS*FTAQTIHTEWNKTL
Trigger: TAAAGTTTTATTCCATTCTGTGTGAATGGTTTGAGCAGTGAACAAAGAATCCATGCAAACCAAGTCATGACTGGAAGAAATGGGGAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATTTCGAACAGCCCTGTaGTTTCCTTTTGGAATTCAC +
Preference number: 2 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSFRTAL*FPFGIH
Trigger: GTGAATTCCAAAAGGAAATCACAGGGCTGTTCGAAA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTTTGTTTTGTTTTAGCTaGACCACGTGTGATTCCTTG +
Preference number: 2 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFLFCFS*TTCDSL
Trigger: CAAGGAATCACACGTGGTGCAGCTAAAACAAAACAA...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTGGATTCTTTGTTCACTaGTCAAACCATTCACACAGA +
Preference number: 2 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFGFFVH*SNHSHR
Trigger: TCTGTGTGAATGGTTTGAGCAGTGAACAAAGAATCC...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGATGACTTGGTTTGCATaGATTCTTTGTTCACTGCTC +
Preference number: 2 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMMTWFA*ILCSLL
Trigger: GAGCAGTGAACAAAGAATCCATGCAAACCAAGTCAT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR TCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTTTAAAGCGGCTAAGCTaGGATGTTAAAAACAGTGTA +
Preference number: 2 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFLKRLS*DVKNSV
Trigger: TACACTGTTTTTAACATCTCAGCTTAGCCGCTTTAA...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATTGTTTTGTTTTAGCTaGACCACGTGTGATTCCTTG +
Preference number: 2 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSLFCFS*TTCDSL
Trigger: CAAGGAATCACACGTGGTGCAGCTAAAACAAAACAA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTAGTCATGACTTGGTTTaGATGGATTCTTTGTTCACT +
Preference number: 2 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFSHDLV*MDSLFT
Trigger: AGTGAACAAAGAATCCATGCAAACCAAGTCATGACT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR GCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGCTTCCGTTTCTAACCTaGATTAAGAGATCTGCAATA +
Preference number: 2 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMLPFLT*IKRSAI
Trigger: TATTGCAGATCTCTTAATGCAGGTTAGAAACGGAAG...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGATATGCGCTATACTGTaGGGTTTCATTTGGAAAGTT +
Preference number: 2 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMICAIL*GFIWKV
Trigger: AACTTTCCAAATGAAACCCCACAGTATAGCGCATAT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTATATGCGCTATACTGTaGGGTTTCATTTGGAAAGTT +
Preference number: 2 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFICAIL*GFIWKV
Trigger: AACTTTCCAAATGAAACCCCACAGTATAGCGCATAT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATAAGTCAACTGTTATGTaGCCTTCTCCTCATTTTAAT +
Preference number: 2 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDKSTVM*PSPHFN
Trigger: ATTAAAATGAGGAGAAGGCCACATAACAGTTGACTT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CAA 90 bp GACAATGACTCACAGCATGAACATAGGCTTTACGATCATCCTAAATaGAGAGCAAGGTATTTATTATCGAAAACAGAGACTGGAGAAAGA +
Preference number: 2 (lower is better)
Translates to: DNDSQHEHRLYDHPK*RARYLLSKTETGER
Trigger: TCTTTCTCCAGTCTCTGTTTTCGATAATAAATACCTTGCTCTCAATTTAGGATGATCGTAAAGCCTATGTTCATGCTGTGAGTCATTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGAAGTCAACTGTTATGTaGCCTTCTCCTCATTTTAAT +
Preference number: 2 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMKSTVM*PSPHFN
Trigger: ATTAAAATGAGGAGAAGGCCACATAACAGTTGACTT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 72 bp GTGGCGGGCGCCTGTAACCTCAGCTATTTGGGAGGCTaGGGCAGGAGAATTGCTGGAACCTGGGAGGCGGAG +
Preference number: 3 (lower is better)
Translates to: VAGACNLSYLGG*GRRIAGTWEAE
Trigger: CTCCGCCTCCCAGGTTCCAGCAATTCTCCTGCCTCAGCCTCCCAAATAGCTGAGGTTACAGGCGCCCGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTAGAGGCTGTTGCTCATaGGCAAACTGGGACCTACCC +
Preference number: 3 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTRGCCS*ANWDLP
Trigger: GGGTAGGTCCCAGTTTGCCAATGAGCAACAGCCTCT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 72 bp AAGCCCTCAGAATATGCCCTAGCTGCCTCGGTTGTGTaGCACACACCGTGGTCTCTGAGTAGAGGCTGTACT +
Preference number: 3 (lower is better)
Translates to: KPSEYALAASVV*HTPWSLSRGCT
Trigger: AGTACAGCCTCTACTCAGAGACCACGGTGTGTGTCACACAACCGAGGCAGCTAGGGCATATTCTGAGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTATCAAAGTGCCACTTTaGAGCTCTCCCAAGCCCCAC +
Preference number: 3 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTIKVPL*SSPKPH
Trigger: GTGGGGCTTGGGAGAGCTCAAAAGTGGCACTTTGAT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTCTCTTTAGCTATGAGTaGTGCCATATGGCTCGCAGA +
Preference number: 3 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTLFSYE*CHMARR
Trigger: TCTGCGAGCCATATGGCACAACTCATAGCTAAAGAG...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CCA 72 bp GTGTACCCCACATCTGTGTGTCTGTGTGTGTATGCGTaGCTATGTGCGTGTAATCTATGCAGTGTGGAAGCC +
Preference number: 3 (lower is better)
Translates to: VYPTSVCLCVYA*LCACNLCSVEA
Trigger: GGCTTCCACACTGCATAGATTACACGCACATAGCCACGCATACACACACAGACACACAGATGTGGGGTACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTAGTAACCTGAGCATCTaGTCTCTCCCAGGTAATTCA +
Preference number: 3 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTSNLSI*SLPGNS
Trigger: TGAATTACCTGGGAGAGACAAGATGCTCAGGTTACT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTATCAAAGTGCCACTTTaGAGCTCTCCCAAGCCCCAC +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSIKVPL*SSPKPH
Trigger: GTGGGGCTTGGGAGAGCTCAAAAGTGGCACTTTGAT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CCA 72 bp AGTCTTGGACACCAGCATACAGAGGCTGTTGCTCATTaGCAAACTGGGACCTACCCCTTCATACTGATTGTC +
Preference number: 3 (lower is better)
Translates to: SLGHQHTEAVAH*QTGTYPFILIV
Trigger: GACAATCAGTATGAAGGGGTAGGTCCCAGTTTGCCAATGAGCAACAGCCTCTGTATGCTGGTGTCCAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTTCTCCTCACAGCCTCTaGAATCAGACCTTGGCCAAT +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSSPHSL*NQTLAN
Trigger: ATTGGCCAAGGTCTGATTCAAGAGGCTGTGAGGAGA...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAGCATACAGAGGCTGTaGCTCATTGGCAAACTGGGA +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSSIQRL*LIGKLG
Trigger: TCCCAGTTTGCCAATGAGCAACAGCCTCTGTATGCT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTTACTACAATGCAGTGTaGGTTTGGACGTCTAGTGAA +
Preference number: 3 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTYYNAV*VWTSSE
Trigger: TTCACTAGACGTCCAAACCAACACTGCATTGTAGTA...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 72 bp ATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTATaGCCAGGGAGGACTGTTAGGCTACTTCTGTGGCCT +
Preference number: 3 (lower is better)
Translates to: ICLDRQTCLKRV*PGRTVRLLLWP
Trigger: AGGCCACAGAAGTAGCCTAACAGTCCTCCCTGGTCATACTCGTTTCAAACAGGTCTGCCTGTCTAGACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CCA 72 bp ACACCAGCATACAGAGGCTGTTGCTCATTGGCAAACTaGGACCTACCCCTTCATACTGATTGTCGGAACAAA +
Preference number: 3 (lower is better)
Translates to: TPAYRGCCSLAN*DLPLHTDCRNK
Trigger: TTTGTTCCGACAATCAGTATGAAGGGGTAGGTCCCAGTTTGCCAATGAGCAACAGCCTCTGTATGCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTACTCATGGACTTGGCTaGATGCTCAGACCTAGTGTA +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSTHGLG*MLRPSV
Trigger: TACACTAGGTCTGAGCATCAAGCCAAGTCCATGAGT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTATCCATGGTTTTAATTaGGTACTTTGGCCTTGCGTT +
Preference number: 3 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTIHGFN*VLWPCV
Trigger: AACGCAAGGCCAAAGTACCAAATTAAAACCATGGAT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTACATTCCTCCATCAGTaGTGTCTCACCTATGAACCA +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSTFLHQ*CLTYEP
Trigger: TGGTTCATAGGTGAGACACAACTGATGGAGGAATGT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGGCAGCTATAAAAACTaGCCTGCCCAAGTTTTTCTG +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSGSYKN*PAQVFL
Trigger: CAGAAAAACTTGGGCAGGCAAGTTTTTATAGCTGCC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAGTAACCTGAGCATCTaGTCTCTCCCAGGTAATTCA +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSSNLSI*SLPGNS
Trigger: TGAATTACCTGGGAGAGACAAGATGCTCAGGTTACT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGCACTGACACTTGTTTaGTGTAAGTCTTGGACACCA +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSALTLV*CKSWTP
Trigger: TGGTGTCCAAGACTTACACAAAACAAGTGTCAGTGC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 72 bp TCCTTTAAAAAGTGTCAATCAGGAGGAAGGGAAGCCTaGGAATTCCCCCTGCCATCTGTGAGCTCTGAATTG +
Preference number: 3 (lower is better)
Translates to: SFKKCQSGGREA*EFPLPSVSSEL
Trigger: CAATTCAGAGCTCACAGATGGCAGGGGGAATTCTCAGGCTTCCCTTCCTCCTGATTGACACTTTTTAAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 72 bp GCTTATATGGGTGGGCTTCCATATGAATATGGGCTCTaGGGTCCCCAAGAAGCTGAATCTTCCAGTGGTTTT +
Preference number: 3 (lower is better)
Translates to: AYMGGLPYEYGL*GPQEAESSSGF
Trigger: AAAACCACTGGAAGATTCAGCTTCTTGGGGACCTCAGAGCCCATATTCATATGGAAGCCCACCCATATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CCA 72 bp GTGTATACACTACTGGCCAAATGTGGTGGTGGATCTTaGCAAAGTCTCTTCCTGATAGCAATGAGTCTGAGG +
Preference number: 3 (lower is better)
Translates to: VYTLLAKCGGGS*QSLFLIAMSLR
Trigger: CCTCAGACTCATTGCTATCAGGAAGAGACTTTGCCAAGATCCACCACCACATTTGGCCAGTAGTGTATACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CCA 72 bp CCTGTACCGGCCTCTTTAGCTATGAGTTGTGCCATATaGCTCGCAGATGTTTATAACTGGAGTCTGTCACAA +
Preference number: 3 (lower is better)
Translates to: PVPASLAMSCAI*LADVYNWSLSQ
Trigger: TTGTGACAGACTCCAGTTATAAACATCTGCGAGCCATATGGCACAACTCATAGCTAAAGAGGCCGGTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATTCCTCTGCTTCTGGCTaGCTTTTGTTCTCCCTTGTC +
Preference number: 3 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDSSASG*LLFSLV
Trigger: GACAAGGGAGAACAAAAGCAAGCCAGAAGCAGAGGA...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAGAGGCAAAGTCTATTaGTTCTCTACTCTCCTCACA +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSRGKVY*FSTLLT
Trigger: TGTGAGGAGAGTAGAGAACAAATAGACTTTGCCTCT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAGAAAGACACTACATTaGACTACTGGGACATTCTGG +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSRKTLH*TTGTFW
Trigger: CCAGAATGTCCCAGTAGTCAAATGTAGTGTCTTTCT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTTACTACAATGCAGTGTaGGTTTGGACGTCTAGTGAA +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSYYNAV*VWTSSE
Trigger: TTCACTAGACGTCCAAACCAACACTGCATTGTAGTA...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTCCTCTGCTTCTGGCTaGCTTTTGTTCTCCCTTGTC +
Preference number: 3 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMSSASG*LLFSLV
Trigger: GACAAGGGAGAACAAAAGCAAGCCAGAAGCAGAGGA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTATCCATGGTTTTAATTaGGTACTTTGGCCTTGCGTT +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSIHGFN*VLWPCV
Trigger: AACGCAAGGCCAAAGTACCAAATTAAAACCATGGAT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CCA 72 bp CACTCCCCATTTCTTCCAGTCATGACTTGGTTTGCATaGATTCTTTGTTCACTGCTCAAACCATTCACACAG +
Preference number: 3 (lower is better)
Translates to: HSPFLPVMTWFA*ILCSLLKPFTQ
Trigger: CTGTGTGAATGGTTTGAGCAGTGAACAAAGAATCCATGCAAACCAAGTCATGACTGGAAGAAATGGGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTCAAAATGAAAGTGCTTaGGAAGCATCATTTAGAGTC +
Preference number: 3 (lower is better)
Translates to: QATSCLNMSRQADLFETSQNESA*EASFRV
Trigger: GACTCTAAATGATGCTTCCAAAGCACTTTCATTTTG...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 72 bp GCATCACTGTACTCCAGGAGCTTTGTTACTCTGATGTaGCAGGCTTTACCTTATGAAGATGCTACATCTGAT +
Preference number: 3 (lower is better)
Translates to: ASLYSRSFVTLM*QALPYEDATSD
Trigger: ATCAGATGTAGCATCTTCATAAGGTAAAGCCTGTCACATCAGAGTAACAAAGCTCCTGGAGTACAGTGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 72 bp CTTTGCTTAGCACAAATGCATAAGCCCAGAATTTGCTaGCAGGTCCATTGTAAAAACCCTGGTCACAAACTG +
Preference number: 3 (lower is better)
Translates to: LCLAQMHKPRIC*QVHCKNPGHKL
Trigger: CAGTTTGTGACCAGGGTTTTTACAATGGACCTGTCAGCAAATTCTGGGCTTATGCATTTGTGCTAAGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514184.5
3UTR-3UTR CAA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATAAGCTGCCTTGGGTTTaGTGTTTGCTCATGTTTTGT +
Preference number: 3 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDKLPWV*CLLMFC
Trigger: ACAAAACATGAGCAAACACAAAACCCAAGGCAGCTT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGACATTCCTCCATCAGTaGTGTCTCACCTATGAACCA +
Preference number: 3 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMTFLHQ*CLTYEP
Trigger: TGGTTCATAGGTGAGACACAACTGATGGAGGAATGT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 72 bp GGTGGACATGGACCATGCTTATACAACTTAAAGCTCTaGACTCTGAGAGGCAAAGTCTATTTGTTCTCTACT +
Preference number: 3 (lower is better)
Translates to: GGHGPCLYNLKL*TLRGKVYLFST
Trigger: AGTAGAGAACAAATAGACTTTGCCTCTCAGAGTTCAGAGCTTTAAGTTGTATAAGCATGGTCCATGTCCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CCA 72 bp AAAACTTGCCTGCCCAAGTTTTTCTGGAATGTTAACTaGCAGCAGGATTATCTATGCAGCAGTCAATTCTCT +
Preference number: 3 (lower is better)
Translates to: KTCLPKFFWNVN*QQDYLCSSQFS
Trigger: AGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATTCCAGAAAAACTTGGGCAGGCAAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CCA 72 bp ATTTCATCAGCTCTCACTTTAATGTGTATACACTACTaGCCAAATGTGGTGGTGGATCTTGGCAAAGTCTCT +
Preference number: 3 (lower is better)
Translates to: ISSALTLMCIHY*PNVVVDLGKVS
Trigger: AGAGACTTTGCCAAGATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGAAGCTGCCTTGGGTTTaGTGTTTGCTCATGTTTTGT +
Preference number: 3 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMKLPWV*CLLMFC
Trigger: ACAAAACATGAGCAAACACAAAACCCAAGGCAGCTT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTCTTCCAGTCATGACTaGGTTTGCATGGATTCTTTG +
Preference number: 3 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMSSSHD*VCMDSL
Trigger: CAAAGAATCCATGCAAACCAAGTCATGACTGGAAGA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAACTGTGGGGTTTCATTaGGAAAGTTATGAGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSTVGFH*ESYECV
Trigger: CACACACTCATAACTTTCCAAATGAAACCCCACAGT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTCAGCCAAACTTGCCTaGAAGTTTGTTGTAGTATTG +
Preference number: 3 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMSAKLA*KFVVVL
Trigger: CAATACTACAACAAACTTCAAGGCAAGTTTGGCTGA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTGTTTGCATGGATTCTTaGTTCACTGCTCAAACCATT +
Preference number: 3 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFVCMDS*FTAQTI
Trigger: AATGGTTTGAGCAGTGAACAAAGAATCCATGCAAAC...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR TCA 72 bp TCACTAGAACTTCATTGCAAACTCATGGACTTGGCTTaGTGCTCAGACCTAGTGTATGAAATCATGTGTGTA +
Preference number: 3 (lower is better)
Translates to: SLELHCKLMDLA*CSDLVYEIMCV
Trigger: TACACACATGATTTCATACACTAGGTCTGAGCATCAAGCCAAGTCCATGAGTTTGCAATGAAGTTCTAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATCAGCCAAACTTGCCTaGAAGTTTGTTGTAGTATTG +
Preference number: 3 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSSAKLA*KFVVVL
Trigger: CAATACTACAACAAACTTCAAGGCAAGTTTGGCTGA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR-3UTR CAA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAGTTTGCATGGATTCTTaGTTCACTGCTCAAACCATT +
Preference number: 3 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSVCMDS*FTAQTI
Trigger: AATGGTTTGAGCAGTGAACAAAGAATCCATGCAAAC...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR GCA 72 bp TTTTTCTGGAATGTTAACTGGCAGCAGGATTATCTATaGAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGT +
Preference number: 3 (lower is better)
Translates to: FFWNVNWQQDYL*SSQFSGRFQIC
Trigger: ACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATTCCAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTATTAGCTGGGTGTGGTaGCGGGCGCCTGTAACCTCA +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTISWVW*RAPVTS
Trigger: TGAGGTTACAGGCGCCCGCCACCACACCCAGCTAAT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CAA 72 bp CTTCTGCCTGCCCAGCCTAAAATCAAAGTGCCACTTTaGAGCTCTCCCAAGCCCCACTCACGAATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLPAQPKIKVPL*SSPKPHSRMCS
Trigger: GGAGCACATTCGTGAGTGGGGCTTGGGAGAGCTCAAAAGTGGCACTTTGATTTTAGGCTGGGCAGGCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATGGCGGGTGGATCCCCTaGGGTCAGGAGCTCGAGACC +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDGGWIP*GQELET
Trigger: GGTCTCGAGCTCCTGACCTCAGGGGATCCACCCGCC...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTCCTCTGCTTCTGGCTTaGTTTTGTTCTCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTPLLLA*FCSPLS
Trigger: GGACAAGGGAGAACAAAAGCAAGCCAGAAGCAGAGG...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTAGAATATGCCCTAGCTaGCTCGGTTGTGTGACACAC +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTRICPS*LGCVTH
Trigger: GTGTGTCACACAACCGAGGCAGCTAGGGCATATTCT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATAGCTACATCCAGGGCTaGGCATTGCCTGCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDSYIQG*ALPAPP
Trigger: CGGAGGCGCAGGCAATGCTCAGCCCTGGATGTAGCT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302274.8
CDS-3UTR TCA 90 bp GTACAGGAGCACAGTGATGTGGTGATACCAGTGCAGGAAGATCAGCTTCTGCTTCATGTTCATTGGGGCTaGTCTTCGGAGTCGCTACGT +
Preference number: 4 (lower is better)
Translates to: VQEHSDVVIPVQEDQLLLHVHWG*SSESLR
Trigger: ACGTAGCGACTCCGAAGATCAGCCCCAATGAACATG...AAGCAGAAGCTGATCTTCCTGCACTGGTATCACCACATCACTGTGCTCCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTGCCATCTGTGAGCTCTaGATTGTCAAAGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTAICEL*IVKVSE
Trigger: CTCAGAGACTTTGACAATTCAGAGCTCACAGATGGC...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTCAGCAAGCAACCTCCTaGCTGAATATGTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTQQATS*LNMSRQ
Trigger: CTGTCTAGACATATTCAGGCAGGAGGTTGCTTGCTG...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGAGGCTGTTGCTCATTaGCAAACTGGGACCTACCCC +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSEAVAH*QTGTYP
Trigger: GGGGTAGGTCCCAGTTTGCCAATGAGCAACAGCCTC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTATTAAATCAACCAGATaGGCCTCCAATGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTIKSTR*ASNGSF
Trigger: GAAGGACCCATTGGAGGCTCATCTGGTTGATTTAAT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAGCTATTTGGGAGGCTaGGGCAGGAGAATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSSYLGG*GRRIAG
Trigger: TCCAGCAATTCTCCTGCCTCAGCCTCCCAAATAGCT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGAGTACAGGAGCACAGTGATGTGGTGATACCAGTGCAGGAAGATCAGCTTCTGATAGCACCTGAAGACTaGAAGGGTCAGAGACCAGAG +
Preference number: 4 (lower is better)
Translates to: RVQEHSDVVIPVQEDQLLIAPED*KGQRPE
Trigger: CTCTGGTCTCTGACCCTTGCAGTCTTCAGGTGCTAT...CAGAAGCTGATCTTCCTGCACTGGTATCACCACATCACTGTGCTCCTGTACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTAAGCCCAGAATTTGCTaGCAGGTCCATTGTAAAAAC +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTKPRIC*QVHCKN
Trigger: GTTTTTACAATGGACCTGTCAGCAAATTCTGGGCTT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTGCTGCCTCGGTTGTGTaGCACACACCGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFAASVV*HTPWSL
Trigger: CAGAGACCACGGTGTGTGTCACACAACCGAGGCAGC...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTACAGGCAGACCTGTTTaGAACGAGTATGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSTGRPV*NEYDQG
Trigger: TCCCTGGTCATACTCGTTTCAAACAGGTCTGCCTGT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGAGTACAGGAGCACAGTGATGTGGTGATACCAGTGCAGGAAGATCAGCTTCTGAGTTGTTATAGCACCTaGAGACTGCAAGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RVQEHSDVVIPVQEDQLLSCYST*RLQGSE
Trigger: CTCTGACCCTTGCAGTCTTCAGGTGCTATAACAACT...CAGAAGCTGATCTTCCTGCACTGGTATCACCACATCACTGTGCTCCTGTACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTCTAGTTCGGGTGCTTTaGTTAGCACAAATGCATAAG +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTLVRVL*LAQMHK
Trigger: CTTATGCATTTGTGCTAAGCAAAGCACCCGAACTAG...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATGGAGACTCGGAAACCTaGCGCCCGCAAGGCATAGTA +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDGDSET*RPQGIV
Trigger: TACTATGCCTTGCGGGCGGCAGGTTTCCGAGTCTCC...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTCAGCAGGATTATCTATaGAGCAGTCAATTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTQQDYL*SSQFSG
Trigger: ACCAGAGAATTGACTGCTGCATAGATAATCCTGCTG...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTAGAAAGATACTCTATTaGAGCATAGTGGGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTRKILY*SIVGQL
Trigger: TAGCTGCCCCACTATGCTGCAATAGAGTATCTTTCT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGCATACAGAGGCTGTTaGTCATTGGCAAACTGGGAC +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSAYRGC*SLANWD
Trigger: GTCCCAGTTTGCCAATGAGCAACAGCCTCTGTATGC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CAA 72 bp AAGTCTTGGACACCAGCATACAGAGGCTGTTGCTCATaGGCAAACTGGGACCTACCCCTTCATACTGATTGT +
Preference number: 4 (lower is better)
Translates to: KSWTPAYRGCCS*ANWDLPLHTDC
Trigger: ACAATCAGTATGAAGGGGTAGGTCCCAGTTTGCCAATGAGCAACAGCCTCTGTATGCTGGTGTCCAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTTGGCTTCATTCTCGTTaGACTGCTTTTCGAATTCAT +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTWLHSR*TAFRIH
Trigger: ATGAATTCGAAAAGCAGTTCAACGAGAATGAAGCCA...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTGGAGGAAGGGAAGCCTaGGAATTCCCCCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFGGREA*EFPLPS
Trigger: AGATGGCAGGGGGAATTCTCAGGCTTCCCTTCCTCC...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAGGTCCCCAAGAAGCTaGATCTTCCAGTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSRSPRS*IFQWFS
Trigger: TGAAAACCACTGGAAGATTCAGCTTCTTGGGGACCT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATGGGTGGGCTTCCATATaGATATGGGCTCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDGWASI*IWALRS
Trigger: GGACCTCAGAGCCCATATTCATATGGAAGCCCACCC...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTCTAGATCGCGCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMSRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTAGA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTAGAAAATGCTGTGACTaGACTGACACTTGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTRKCCD*TDTCFV
Trigger: CACAAAACAAGTGTCAGTGCAGTCACAGCATTTTCT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AAGATCAGCTTCTGCTTCCTCAGAATAATGAATATTGTATCTCCTAGTTCGGGTGTGTTCTCCAGGCCCTaGGGACGGCAGAGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: KISFCFLRIMNIVSPSSGVFSRP*GRQSSL
Trigger: TAAGGAGCTCTGCCGTCCGCAGGGCCTGGAGAACAC...ACCCGAACTAGGAGATACAATATTCATTATTCTGAGGAAGCAGAAGCTGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR CCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTATGACTTGGTTTGCATaGATTCTTTGTTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTMTWFA*ILCSLL
Trigger: GAGCAGTGAACAAAGAATCCATGCAAACCAAGTCAT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTCTTCCAGTCATGACTTaGTTTGCATGGATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTLPVMT*FAWILC
Trigger: ACAAAGAATCCATGCAAACCAAGTCATGACTGGAAG...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTCAGATGAGCCTCCAATaGGTCCTTCAATTAAATTCA +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTQMSLQ*VLQLNS
Trigger: TGAATTTAATTGAAGGACCCATTGGAGGCTCATCTG...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGTTTCAGATTTGTCATaGGCCAGTGATCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSVSDLS*ASDPAS
Trigger: TGAGGCTGGATCACTGGCCCATGACAAATCTGAAAC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTATTAGCTGGGTGTGGTaGCGGGCGCCTGTAACCTCA +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFISWVW*RAPVTS
Trigger: TGAGGTTACAGGCGCCCGCCACCACACCCAGCTAAT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGGCCAAATGTGGTGGTaGATCTTGGCAAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSGQMWW*ILAKSL
Trigger: AAGAGACTTTGCCAAGATCCACCACCACATTTGGCC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTTGCTCATTGGCAAACTaGGACCTACCCCTTCATACT +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSCSLAN*DLPLHT
Trigger: AGTATGAAGGGGTAGGTCCCAGTTTGCCAATGAGCA...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATCATGTTCATTGGGGCTaGTCTTCGGAGTCGCTACGT +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDHVHWG*SSESLR
Trigger: ACGTAGCGACTCCGAAGATCAGCCCCAATGAACATG...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTATCAGTTTCTTTACATaGGCAGAGAGGTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSISFFT*AERWRS
Trigger: GCTTCTCCACCTCTCTGCTCATGTAAAGAAACTGAT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAGGAGACTCGGAAACCTaGCGCCCGCAAGGCATAGTA +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSGDSET*RPQGIV
Trigger: TACTATGCCTTGCGGGCGGCAGGTTTCCGAGTCTCC...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATCTAGATCGCGCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSSRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTAGA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATCCCCACTCACGAATGTaGTCCCACTGTCCATCTAAC +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDPHSRM*SHCPSN
Trigger: GTTAGATGGACAGTGGGAGCACATTCGTGAGTGGGG...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp GTACAGGAGCACAGTGATGTGGTGATACCAGTGCAGGAAGATCAGCTTCTGCTTTTTTCCTGCATCCATTaGATGGCTTCATTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: VQEHSDVVIPVQEDQLLLFSCIH*MASFSL
Trigger: CAACGAGAATGAAGCCATCCAATGGATGCAGGAAAA...AAGCAGAAGCTGATCTTCCTGCACTGGTATCACCACATCACTGTGCTCCTGTAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR CCA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTATATGCGCTATACTGTaGGGTTTCATTTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTICAIL*GFIWKV
Trigger: AACTTTCCAAATGAAACCCCACAGTATAGCGCATAT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGAAAATTAGCTGGGTGTaGTGGCGGGCGCCTGTAACC +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMKISWV*WRAPVT
Trigger: GGTTACAGGCGCCCGCCACCACACCCAGCTAATTTT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTGAGGCTGTTGCTCATTaGCAAACTGGGACCTACCCC +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFEAVAH*QTGTYP
Trigger: GGGGTAGGTCCCAGTTTGCCAATGAGCAACAGCCTC...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCATGTTCATTGGGGCTaGTCTTCGGAGTCGCTACGT +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFHVHWG*SSESLR
Trigger: ACGTAGCGACTCCGAAGATCAGCCCCAATGAACATG...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGACCCTGGTCACAAACTaGCTGCTTCAGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMTLVTN*LLQAFG
Trigger: ACCAAAGGCCTGAAGCAGTCAGTTTGTGACCAGGGT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp CAGTGCAGGAAGATCAGCTTCTGCTTCCTCAGAATAATGAATATTGTATCTCCTACCCTGGTCACAAACTaGCTGCTTCAGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: QCRKISFCFLRIMNIVSPTLVTN*LLQAFG
Trigger: ACCAAAGGCCTGAAGCAGTCAGTTTGTGACCAGGGT...AGGAGATACAATATTCATTATTCTGAGGAAGCAGAAGCTGATCTTCCTGCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAAGCCCAGAATTTGCTaGCAGGTCCATTGTAAAAAC +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSKPRIC*QVHCKN
Trigger: GTTTTTACAATGGACCTGTCAGCAAATTCTGGGCTT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATAGCACAGTGATGTGGTaGTACCAGTGCAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDSTVMW*YQCRKI
Trigger: GATCTTCCTGCACTGGTATCACCACATCACTGTGCT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp ATATTGTATCTCCTAGTTCGGGTGCTTTGCTTAGCACAAATGCATAAGCCCAGAAGCACAGTGATGTGGTaGTACCAGTGCAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: ILYLLVRVLCLAQMHKPRSTVMW*YQCRKI
Trigger: GATCTTCCTGCACTGGTATCACCACATCACTGTGCT...TCTGGGCTTATGCATTTGTGCTAAGCAAAGCACCCGAACTAGGAGATACAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATACACACCGTGGTCTCTaGGTAGAGGCTGTACTATCA +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDTHRGL*VEAVLS
Trigger: TGATAGTACAGCCTCTACTCAGAGACCACGGTGTGT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGCTCCTCACAGCCTCTTaGATCAGACCTTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMLLTAS*IRPWPI
Trigger: GATTGGCCAAGGTCTGATTCAAGAGGCTGTGAGGAG...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTCCTACCCCTTCATACTaGTTGTCGGAACAAAATAGA +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSPTPSY*LSEQNR
Trigger: TCTATTTTGTTCCGACAATCAGTATGAAGGGGTAGG...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTCAGCAGGATTATCTATaGAGCAGTCAATTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSQQDYL*SSQFSG
Trigger: ACCAGAGAATTGACTGCTGCATAGATAATCCTGCTG...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATAAAGCCCTCAGAATATaGCCTAGCTGCCTCGGTTGT +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDKALRI*PSCLGC
Trigger: ACAACCGAGGCAGCTAGGGCATATTCTGAGGGCTTT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTTTCTTCAAAGCTCTGTaGATGTGCCCTGTACCGGCC +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFFFKAL*MCPVPA
Trigger: GGCCGGTACAGGGCACATGCACAGAGCTTTGAAGAA...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGCCCCACTCACGAATGTaGTCCCACTGTCCATCTAAC +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMPHSRM*SHCPSN
Trigger: GTTAGATGGACAGTGGGAGCACATTCGTGAGTGGGG...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATGTAGGAGGAAATGAATaGCTTGCGGTCTTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDVGGNE*LAVLVP
Trigger: GGGCACTAAGACCGCAAGGCATTCATTTCCTCCTAC...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394607.7
CDS-3UTR CCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAAAAATTAGCTGGGTGTaGTGGCGGGCGCCTGTAACC +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSKISWV*WRAPVT
Trigger: GGTTACAGGCGCCCGCCACCACACCCAGCTAATTTT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTAGTCAGAACCCTTCATaGCCGGCCCGAATGGGTTAT +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFSQNPS*PARMGY
Trigger: ATAACCCATTCGGGCCGGCCATGAAGGGTTCTGACT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CAA 72 bp TGTGTATACACTACTGGCCAAATGTGGTGGTGGATCTaGGCAAAGTCTCTTCCTGATAGCAATGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: CVYTTGQMWWWI*AKSLPDSNESE
Trigger: CTCAGACTCATTGCTATCAGGAAGAGACTTTGCCAAGATCCACCACCACATTTGGCCAGTAGTGTATACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCACCGTAGGAGGAAATaGATGCCTTGCGGTCTTAGT +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFHRRRK*MPCGLS
Trigger: ACTAAGACCGCAAGGCATTCATTTCCTCCTACGGTG...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAACCCTGGTCACAAACTaGCTGCTTCAGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSTLVTN*LLQAFG
Trigger: ACCAAAGGCCTGAAGCAGTCAGTTTGTGACCAGGGT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGAGCACAGTGATGTGGTaGTACCAGTGCAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMSTVMW*YQCRKI
Trigger: GATCTTCCTGCACTGGTATCACCACATCACTGTGCT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGAGTACAGGAGCACAGTaGTGTGGTGATACCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMSTGAQ*CGDTSA
Trigger: TGCACTGGTATCACCACATCACTGTGCTCCTGTACT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGCTTCTGCTTCCTCAGAATAATGAATATTGTATCTCCTAGTTCGGGTGCTTTGAGTACAGGAGCACAGTaGTGTGGTGATACCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SFCFLRIMNIVSPSSGALSTGAQ*CGDTSA
Trigger: TGCACTGGTATCACCACATCACTGTGCTCCTGTACT...CAAAGCACCCGAACTAGGAGATACAATATTCATTATTCTGAGGAAGCAGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATCTCATGGACTTGGCTTaGTGCTCAGACCTAGTGTAT +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDLMDLA*CSDLVY
Trigger: ATACACTAGGTCTGAGCATCAAGCCAAGTCCATGAG...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATTGTTTGAAACGAGTATaGCCAGGGAGGACTGTTAGG +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDCLKRV*PGRTVR
Trigger: CCTAACAGTCCTCCCTGGTCATACTCGTTTCAAACA...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATAGGTCCCCAAGAAGCTaGATCTTCCAGTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDRSPRS*IFQWFS
Trigger: TGAAAACCACTGGAAGATTCAGCTTCTTGGGGACCT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTCGTTTATTCATTAGGTaGCGACCACCGAATATAAAG +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSRLFIR*RPPNIK
Trigger: CTTTATATTCGGTGGTCGGCACCTAATGAATAAACG...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATTGGTCACAAACTGACTaGTTCAGGCCTTTGGTCATC +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDWSQTD*FRPLVI
Trigger: GATGACCAAAGGCCTGAAGCAGTCAGTTTGTGACCA...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGGATTCTTTGTTCACTaGTCAAACCATTCACACAGA +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSGFFVH*SNHSHR
Trigger: TCTGTGTGAATGGTTTGAGCAGTGAACAAAGAATCC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTTCACTAGAACTTCATTaGAAACTCATGGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSSLELH*KLMDLA
Trigger: AGCCAAGTCCATGAGTTTGCAATGAAGTTCTAGTGA...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGGCATACAGAGGCTGTTaGTCATTGGCAAACTGGGAC +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMAYRGC*SLANWD
Trigger: GTCCCAGTTTGCCAATGAGCAACAGCCTCTGTATGC...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTAAAGCTCTGTGCATGTaGCCTGTACCGGCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFKALCM*PVPASL
Trigger: TAAAGAGGCCGGTACAGGGCACATGCACAGAGCTTT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGAAAGCTCTGTGCATGTaGCCTGTACCGGCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMKALCM*PVPASL
Trigger: TAAAGAGGCCGGTACAGGGCACATGCACAGAGCTTT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATTCTTCAAAGCTCTGTaGATGTGCCCTGTACCGGCC +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSFFKAL*MCPVPA
Trigger: GGCCGGTACAGGGCACATGCACAGAGCTTTGAAGAA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTTTCTGGAATGTTAACTaGCAGCAGGATTATCTATGC +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSFWNVN*QQDYLC
Trigger: GCATAGATAATCCTGCTGCCAGTTAACATTCCAGAA...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGCAGAAGCTGGGGCTATaGCCAGACTTCTGGAACATT +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMQKLGL*PDFWNI
Trigger: AATGTTCCAGAAGTCTGGCCATAGCCCCAGCTTCTG...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTCTCAGACCTAGTGTATaGAATCATGTGTGTATGAAA +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSLRPSV*NHVCMK
Trigger: TTTCATACACACATGATTTCATACACTAGGTCTGAG...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAACACACCGTGGTCTCTaGGTAGAGGCTGTACTATCA +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSTHRGL*VEAVLS
Trigger: TGATAGTACAGCCTCTACTCAGAGACCACGGTGTGT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTCAAAATAGAGCATTGTaGTTTCATCAGCTCTCACTT +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSQNRAL*FHQLSL
Trigger: AAGTGAGAGCTGATGAAATCACAATGCTCTATTTTG...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGGCCATCTGTGAGCTCTaGATTGTCAAAGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMAICEL*IVKVSE
Trigger: CTCAGAGACTTTGACAATTCAGAGCTCACAGATGGC...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAACAGGCAGACCTGTTTaGAACGAGTATGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSTGRPV*NEYDQG
Trigger: TCCCTGGTCATACTCGTTTCAAACAGGTCTGCCTGT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTTATGAATATGGGCTCTaGGGTCCCCAAGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFYEYGL*GPQEAE
Trigger: TTCAGCTTCTTGGGGACCTCAGAGCCCATATTCATA...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTATGAATATGGGCTCTaGGGTCCCCAAGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMYEYGL*GPQEAE
Trigger: TTCAGCTTCTTGGGGACCTCAGAGCCCATATTCATA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTCTTCCGTTTCTAACCTaGATTAAGAGATCTGCAATA +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSLPFLT*IKRSAI
Trigger: TATTGCAGATCTCTTAATGCAGGTTAGAAACGGAAG...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAAAAGCCCTCAGAATATaGCCTAGCTGCCTCGGTTGT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSKALRI*PSCLGC
Trigger: ACAACCGAGGCAGCTAGGGCATATTCTGAGGGCTTT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGCAAGCAACCTCCTaGCTGAATATGTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFQQATS*LNMSRQ
Trigger: CTGTCTAGACATATTCAGGCAGGAGGTTGCTTGCTG...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTGTTTCAGATTTGTCATaGGCCAGTGATCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFVSDLS*ASDPAS
Trigger: TGAGGCTGGATCACTGGCCCATGACAAATCTGAAAC...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTATCGAAAACAGAGACTaGAGAAAGACACTACATTTG +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSIENRD*RKTLHL
Trigger: CAAATGTAGTGTCTTTCTCCAGTCTCTGTTTTCGAT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATTGTGGTGGTGGATCTTaGCAAAGTCTCTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDCGGGS*QSLFLI
Trigger: TATCAGGAAGAGACTTTGCCAAGATCCACCACCACA...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTGGCCAAATGTGGTGGTaGATCTTGGCAAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFGQMWW*ILAKSL
Trigger: AAGAGACTTTGCCAAGATCCACCACCACATTTGGCC...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTACTACTGGCCAAATGTaGTGGTGGATCTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFTTGQM*WWILAK
Trigger: CTTTGCCAAGATCCACCACCACATTTGGCCAGTAGT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGACTACTGGCCAAATGTaGTGGTGGATCTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMTTGQM*WWILAK
Trigger: CTTTGCCAAGATCCACCACCACATTTGGCCAGTAGT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CAA 72 bp CAAAGTCTATTTGTTCTCTACTCTCCTCACAGCCTCTaGAATCAGACCTTGGCCAATCCAGTTACTCTGTTA +
Preference number: 4 (lower is better)
Translates to: QSLFVLYSPHSL*NQTLANPVTLL
Trigger: TAACAGAGTAACTGGATTGGCCAAGGTCTGATTCAAGAGGCTGTGAGGAGAGTAGAGAACAAATAGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CAA 72 bp ATTCAAGAAAATGCTGTGACTGCACTGACACTTGTTTaGTGTAAGTCTTGGACACCAGCATACAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: IQENAVTALTLV*CKSWTPAYRGC
Trigger: ACAGCCTCTGTATGCTGGTGTCCAAGACTTACACAAAACAAGTGTCAGTGCAGTCACAGCATTTTCTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTATCTGTCTGTCGAATTaGTCTTCGGCTCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFICLSN*SSAHLF
Trigger: AAAGAGGTGAGCCGAAGATCAATTCGACAGACAGAT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATCATTTCTTCCAGTCATaGCTTGGTTTGCATGGATTC +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDHFFQS*LGLHGF
Trigger: GAATCCATGCAAACCAAGTCATGACTGGAAGAAATG...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCACTCATGGACTTGGCTTaGTGCTCAGACCTAGTGTAT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSLMDLA*CSDLVY
Trigger: ATACACTAGGTCTGAGCATCAAGCCAAGTCCATGAG...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTATCAGTTTCTTTACATaGGCAGAGAGGTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFISFFT*AERWRS
Trigger: GCTTCTCCACCTCTCTGCTCATGTAAAGAAACTGAT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGGAAAGACACTACATTTaGCTACTGGGACATTCTGGG +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMERHYI*LLGHSG
Trigger: CCCAGAATGTCCCAGTAGTCAAATGTAGTGTCTTTC...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATCCTACCCCTTCATACTaGTTGTCGGAACAAAATAGA +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDPTPSY*LSEQNR
Trigger: TCTATTTTGTTCCGACAATCAGTATGAAGGGGTAGG...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATGTTTGAAACGAGTATaGCCAGGGAGGACTGTTAGG +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSCLKRV*PGRTVR
Trigger: CCTAACAGTCCTCCCTGGTCATACTCGTTTCAAACA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATGGTCACAAACTGACTaGTTCAGGCCTTTGGTCATC +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSWSQTD*FRPLVI
Trigger: GATGACCAAAGGCCTGAAGCAGTCAGTTTGTGACCA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTGTGCGTGTAATCTATaGAGTGTGGAAGCCCCTAAT +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMCACNL*SVEAPN
Trigger: ATTAGGGGCTTCCACACTGCATAGATTACACGCACA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATGGTGGACATGGACCATaGTTATACAACTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDGGHGP*LYNLKL
Trigger: GAGCTTTAAGTTGTATAAGCATGGTCCATGTCCACC...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATAAGAGGTTACTACAATaGAGTGTTGGTTTGGACGTC +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDKRLLQ*SVGLDV
Trigger: GACGTCCAAACCAACACTGCATTGTAGTAACCTCTT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATTTTTCCTGCATCCATTaGATGGCTTCATTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDFSCIH*MASFSL
Trigger: CAACGAGAATGAAGCCATCCAATGGATGCAGGAAAA...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTATCCCTAAGCTGCCTTaGGTTTTGTGTTTGCTCATG +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFIPKLP*VLCLLM
Trigger: CATGAGCAAACACAAAACCCAAGGCAGCTTAGGGAT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTGTGGTGGTGGATCTTaGCAAAGTCTCTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMCGGGS*QSLFLI
Trigger: TATCAGGAAGAGACTTTGCCAAGATCCACCACCACA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAACTGGCCAAATGTGGTaGTGGATCTTGGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSTGQMW*WILAKS
Trigger: AGACTTTGCCAAGATCCACCACCACATTTGGCCAGT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATATGTGTATACACTACTaGCCAAATGTGGTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDMCIHY*PNVVVD
Trigger: ATCCACCACCACATTTGGCCAGTAGTGTATACACAT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTAATGCAGTGTTGGTTTaGACGTCTAGTGAAATATAT +
Preference number: 4 (lower is better)
Translates to: QATSCLNMSRQADLFETSNAVLV*TSSEIY
Trigger: ATATATTTCACTAGACGTCCAAACCAACACTGCATT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAATCTGTCTGTCGAATTaGTCTTCGGCTCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSICLSN*SSAHLF
Trigger: AAAGAGGTGAGCCGAAGATCAATTCGACAGACAGAT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAAAGGATGGGAGTAAGTaGCTTCGAATAACCACCTCA +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSKDGSK*LRITTS
Trigger: TGAGGTGGTTATTCGAAGTCACTTACTCCCATCCTT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTACAACTTAAAGCTCTaGACTCTGAGAGGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMYNLKL*TLRGKV
Trigger: GACTTTGCCTCTCAGAGTTCAGAGCTTTAAGTTGTA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAGAAAGACACTACATTTaGCTACTGGGACATTCTGGG +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSERHYI*LLGHSG
Trigger: CCCAGAATGTCCCAGTAGTCAAATGTAGTGTCTTTC...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTAAATATATTTTACTGTaGGACTTCTGCCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFKYILL*DFCLPS
Trigger: GCTGGGCAGGCAGAAGTCTCACAGTAAAATATATTT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGCTAGTTCGGGTGCTTTaGTTAGCACAAATGCATAAG +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMLVRVL*LAQMHK
Trigger: CTTATGCATTTGTGCTAAGCAAAGCACCCGAACTAG...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGCTTCTGCTTCCTCAGAATAATGAATATTGTATCTCCTAGTTCGGGTGCTTTGCTAGTTCGGGTGCTTTaGTTAGCACAAATGCATAAG +
Preference number: 4 (lower is better)
Translates to: SFCFLRIMNIVSPSSGALLVRVL*LAQMHK
Trigger: CTTATGCATTTGTGCTAAGCAAAGCACCCGAACTAG...CAAAGCACCCGAACTAGGAGATACAATATTCATTATTCTGAGGAAGCAGAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR GCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATTTGTTTTGTTTTAGCTaGACCACGTGTGATTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDLFCFS*TTCDSL
Trigger: CAAGGAATCACACGTGGTGCAGCTAAAACAAAACAA...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGGCAGCTATAAAAACTTaGCTGCCCAAGTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMAAIKT*LPKFFW
Trigger: CCAGAAAAACTTGGGCAGGCAAGTTTTTATAGCTGC...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTGCAGCTATAAAAACTTaGCTGCCCAAGTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFAAIKT*LPKFFW
Trigger: CCAGAAAAACTTGGGCAGGCAAGTTTTTATAGCTGC...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTAGAAAGATACTCTATTaGAGCATAGTGGGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFRKILY*SIVGQL
Trigger: TAGCTGCCCCACTATGCTGCAATAGAGTATCTTTCT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATTTAGCCCAAGAACAATaGTTTCACCATAGTAGGATC +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDLAQEQ*FHHSRI
Trigger: GATCCTACTATGGTGAAAGCATTGTTCTTGGGCTAA...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATAACATTGCTGTGATTTaGTCTGTGAGGCTTATATGG +
Preference number: 4 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDNIAVI*SVRLIW
Trigger: CCATATAAGCCTCACAGAGCAAATCACAGCAATGTT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGACTGCTTCAGGCCTTTaGTCATCAAAATGTACACCA +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMTASGL*SSKCTP
Trigger: TGGTGTACATTTTGATGACCAAAGGCCTGAAGCAGT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGCTTCTGCTTCCTCAGAATAATGAATATTGTATCTCCTAGTTCGGGTGCTTTGACTGCTTCAGGCCTTTaGTCATCAAAATGTACACCA +
Preference number: 4 (lower is better)
Translates to: SFCFLRIMNIVSPSSGALTASGL*SSKCTP
Trigger: TGGTGTACATTTTGATGACCAAAGGCCTGAAGCAGT...CAAAGCACCCGAACTAGGAGATACAATATTCATTATTCTGAGGAAGCAGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTTTCATTGCAAACTCATaGACTTGGCTTGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFFIANS*TWLDAQ
Trigger: CTGAGCATCAAGCCAAGTCCATGAGTTTGCAATGAA...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTTCATTGCAAACTCATaGACTTGGCTTGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMFIANS*TWLDAQ
Trigger: CTGAGCATCAAGCCAAGTCCATGAGTTTGCAATGAA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTAGTGTCTACAAGAGGTaGACATGGACCATGCTTATA +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFSVYKR*TWTMLI
Trigger: TATAAGCATGGTCCATGTCCACCTCTTGTAGACACT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTATGTTTCAAAAGCTGTaGGAGACAATGACTCACAGC +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFMFQKL*ETMTHS
Trigger: GCTGTGAGTCATTGTCTCCCACAGCTTTTGAAACAT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTTCTGTGAGGCTTATATaGGTGGGCTTCCATATGAAT +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFSVRLI*VGFHMN
Trigger: ATTCATATGGAAGCCCACCCATATAAGCCTCACAGA...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp CAGTGCAGGAAGATCAGCTTCTGCTTCCTCAGAATAATGAATATTGTATCTCCTTGGCTTCATTCTCGTTaGACTGCTTTTCGAATTCAT +
Preference number: 4 (lower is better)
Translates to: QCRKISFCFLRIMNIVSPWLHSR*TAFRIH
Trigger: ATGAATTCGAAAAGCAGTTCAACGAGAATGAAGCCA...AGGAGATACAATATTCATTATTCTGAGGAAGCAGAAGCTGATCTTCCTGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR TCA 90 bp AAGATCAGCTTCTGCTTCCTCAGAATAATGAATATTGTATCTCCTAGTTCGGGTAAGCCCAGAATTTGCTaGCAGGTCCATTGTAAAAAC +
Preference number: 4 (lower is better)
Translates to: KISFCFLRIMNIVSPSSGKPRIC*QVHCKN
Trigger: GTTTTTACAATGGACCTGTCAGCAAATTCTGGGCTT...ACCCGAACTAGGAGATACAATATTCATTATTCTGAGGAAGCAGAAGCTGATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR TCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTTTTCTGAAGCTGACTTaGAGCAGGATGAATATCTTC +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFFLKLT*SRMNIF
Trigger: GAAGATATTCATCCTGCTTCAAGTCAGCTTCAGAAA...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATACAACTTAAAGCTCTaGACTCTGAGAGGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSYNLKL*TLRGKV
Trigger: GACTTTGCCTCTCAGAGTTCAGAGCTTTAAGTTGTA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGCTTCTGCTTCCTCAGAATAATGAATATTGTATCTCCTAGTTCGGGTGCTTTGCGTTTATTCATTAGGTaGCGACCACCGAATATAAAG +
Preference number: 4 (lower is better)
Translates to: SFCFLRIMNIVSPSSGALRLFIR*RPPNIK
Trigger: CTTTATATTCGGTGGTCGGCACCTAATGAATAAACG...CAAAGCACCCGAACTAGGAGATACAATATTCATTATTCTGAGGAAGCAGAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR GCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTCACTAGAACTTCATTaGAAACTCATGGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMSLELH*KLMDLA
Trigger: AGCCAAGTCCATGAGTTTGCAATGAAGTTCTAGTGA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAGGTGGACATGGACCATaGTTATACAACTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSGGHGP*LYNLKL
Trigger: GAGCTTTAAGTTGTATAAGCATGGTCCATGTCCACC...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTAGAAAATGCTGTGACTaGACTGACACTTGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFRKCCD*TDTCFV
Trigger: CACAAAACAAGTGTCAGTGCAGTCACAGCATTTTCT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATTTAGCTATGAGTTGTaGCATATGGCTCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSFSYEL*HMARRC
Trigger: ACATCTGCGAGCCATATGGCACAACTCATAGCTAAA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAAAGAGGTTACTACAATaGAGTGTTGGTTTGGACGTC +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSKRLLQ*SVGLDV
Trigger: GACGTCCAAACCAACACTGCATTGTAGTAACCTCTT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCTTCCAGTCATGACTTaGTTTGCATGGATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFLPVMT*FAWILC
Trigger: ACAAAGAATCCATGCAAACCAAGTCATGACTGGAAG...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTTCTGGAATGTTAACTaGCAGCAGGATTATCTATGC +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMFWNVN*QQDYLC
Trigger: GCATAGATAATCCTGCTGCCAGTTAACATTCCAGAA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTACAAGAGGTGGACATaGACCATGCTTATACAACTT +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMYKRWT*TMLIQL
Trigger: AAGTTGTATAAGCATGGTCCATGTCCACCTCTTGTA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGACTACATTTGACTACTaGGACATTCTGGGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMTTFDY*DILGAY
Trigger: ATAAGCACCCAGAATGTCCCAGTAGTCAAATGTAGT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTACTACATTTGACTACTaGGACATTCTGGGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFTTFDY*DILGAY
Trigger: ATAAGCACCCAGAATGTCCCAGTAGTCAAATGTAGT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTGCAGATGTTTATAACTaGAGTCTGTCACAACAGCAT +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFADVYN*SLSQQH
Trigger: ATGCTGTTGTGACAGACTCCAGTTATAAACATCTGC...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTATGAGTTGTGCCATATaGCTCGCAGATGTTTATAAC +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFMSCAI*LADVYN
Trigger: GTTATAAACATCTGCGAGCCATATGGCACAACTCAT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTACTACAATGCAGTGTTaGTTTGGACGTCTAGTGAAA +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFTTMQC*FGRLVK
Trigger: TTTCACTAGACGTCCAAACCAACACTGCATTGTAGT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATCTGTGAGGCTTATATaGGTGGGCTTCCATATGAAT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSSVRLI*VGFHMN
Trigger: ATTCATATGGAAGCCCACCCATATAAGCCTCACAGA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATGGCTTCATTCTCGTTaGACTGCTTTTCGAATTCAT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSWLHSR*TAFRIH
Trigger: ATGAATTCGAAAAGCAGTTCAACGAGAATGAAGCCA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCACGTTTATTCATTAGGTaGCGACCACCGAATATAAAG +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSRLFIR*RPPNIK
Trigger: CTTTATATTCGGTGGTCGGCACCTAATGAATAAACG...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTGTTTTCAGCCAAACTTaGCTTGAAGTTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFVFSQT*LEVCCS
Trigger: ACTACAACAAACTTCAAGGCAAGTTTGGCTGAAAAC...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAGGATTCTTTGTTCACTaGTCAAACCATTCACACAGA +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSGFFVH*SNHSHR
Trigger: TCTGTGTGAATGGTTTGAGCAGTGAACAAAGAATCC...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGATAGTAGGATCGGGATaGAGTGGAAAATCTTCAATA +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMIVGSG*SGKSSI
Trigger: TATTGAAGATTTTCCACTGCATCCCGATCCTACTAT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTTTGGTACTTTGGCCTTaGGTTAGATGTAATATGGTA +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFLVLWP*VRCNMV
Trigger: TACCATATTACATCTAACGCAAGGCCAAAGTACCAA...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGTTGGTACTTTGGCCTTaGGTTAGATGTAATATGGTA +
Preference number: 4 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMLVLWP*VRCNMV
Trigger: TACCATATTACATCTAACGCAAGGCCAAAGTACCAA...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAAACATTGCTGTGATTTaGTCTGTGAGGCTTATATGG +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSNIAVI*SVRLIW
Trigger: CCATATAAGCCTCACAGAGCAAATCACAGCAATGTT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATACAAGAGGTGGACATaGACCATGCTTATACAACTT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSYKRWT*TMLIQL
Trigger: AAGTTGTATAAGCATGGTCCATGTCCACCTCTTGTA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAACTACAATGCAGTGTTaGTTTGGACGTCTAGTGAAA +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSTTMQC*FGRLVK
Trigger: TTTCACTAGACGTCCAAACCAACACTGCATTGTAGT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR TCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCACTCAGACCTAGTGTATaGAATCATGTGTGTATGAAA +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSLRPSV*NHVCMK
Trigger: TTTCATACACACATGATTTCATACACTAGGTCTGAG...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAGTTTTCAGCCAAACTTaGCTTGAAGTTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSVFSQT*LEVCCS
Trigger: ACTACAACAAACTTCAAGGCAAGTTTGGCTGAAAAC...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR GCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAAGTCATGACTTGGTTTaGATGGATTCTTTGTTCACT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSSHDLV*MDSLFT
Trigger: AGTGAACAAAGAATCCATGCAAACCAAGTCATGACT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAATATGCGCTATACTGTaGGGTTTCATTTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSICAIL*GFIWKV
Trigger: AACTTTCCAAATGAAACCCCACAGTATAGCGCATAT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTAAGTCAACTGTTATGTaGCCTTCTCCTCATTTTAAT +
Preference number: 4 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFKSTVM*PSPHFN
Trigger: ATTAAAATGAGGAGAAGGCCACATAACAGTTGACTT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CCA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAAATGCAGTGTTGGTTTaGACGTCTAGTGAAATATAT +
Preference number: 4 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSNAVLV*TSSEIY
Trigger: ATATATTTCACTAGACGTCCAAACCAACACTGCATT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
3UTR CAA 72 bp TCACAGCATGAACATAGGCTTTACGATCATCCTAAATaGAGAGCAAGGTATTTATTATCGAAAACAGAGACT +
Preference number: 4 (lower is better)
Translates to: SQHEHRLYDHPK*RARYLLSKTET
Trigger: AGTCTCTGTTTTCGATAATAAATACCTTGCTCTCAATTTAGGATGATCGTAAAGCCTATGTTCATGCTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS CCA 90 bp CCAGGGCTGAGCATTGCCTGCGCCTCCGCTCCCAGCTCCTCTCTCTaGGGCTCTCCTCCTCCCGGCGTCCGCATCCACCGTAGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: PGLSIACASAPSSSL*GSPPPGVRIHRRRK
Trigger: TTTCCTCCTACGGTGGATGCGGACGCCGGGAGGAGGAGAGCCCCAGAGAGAGGAGCTGGGAGCGGAGGCGCAGGCAATGCTCAGCCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302274.8
CDS CCA 90 bp GAGTCGCTACGTGTTCTCTGCGCCTCCGCTCCCAGCTCCTCTCTCTaGGGCTCTCCTCCTCCCGGCGTCCGCATCCACCGTAGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: ESLRVLCASAPSSSL*GSPPPGVRIHRRRK
Trigger: TTTCCTCCTACGGTGGATGCGGACGCCGGGAGGAGGAGAGCCCCAGAGAGAGGAGCTGGGAGCGGAGGCGCAGAGAACACGTAGCGACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394607.7
CDS TCA 90 bp TCCAGCGGTCGTCTCTTCTCCCAGCCTCTCAGCTACATCCAGGGCTaGGCATTGCCTGCGCCTCCGCTCCCAGCTCCTCTCTCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: SSGRLFSQPLSYIQG*ALPAPPLPAPLSGA
Trigger: AGCCCCAGAGAGAGGAGCTGGGAGCGGAGGCGCAGGCAATGCTCAGCCCTGGATGTAGCTGAGAGGCTGGGAGAAGAGACGACCGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302274.8
CDS GCA 90 bp TCTCTTCTCCCAGCCTCTCAGCTACATCCAGGGCTGAGCATTGCCTaGGCCTCCGCTCCCAGCTCCTCTCTCTGGGGCTCTCCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: SLLPASQLHPGLSIA*ASAPSSSLWGSPPP
Trigger: GGGAGGAGGAGAGCCCCAGAGAGAGGAGCTGGGAGCGGAGGCGCAGGCAATGCTCAGCCCTGGATGTAGCTGAGAGGCTGGGAGAAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302274.8
CDS GCA 90 bp GTCGTCTCTTCTCCCAGCCTCTCAGCTACATCCAGGGCTGAGCATTaGCTGCGCCTCCGCTCCCAGCTCCTCTCTCTGGGGCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VVSSPSLSATSRAEH*LRLRSQLLSLGLSS
Trigger: GGAGGAGAGCCCCAGAGAGAGGAGCTGGGAGCGGAGGCGCAGGCAATGCTCAGCCCTGGATGTAGCTGAGAGGCTGGGAGAAGAGACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302274.8
CDS TCA 90 bp CTTCGGAGTCGCTACGTGTTCTCTCGTGGGCCGCCTTGCTTTGAATaGAGTTTCAGCTTGCAGGGCGCATCCCCGCGGCGCGTGGACCCG +
Preference number: 5 (lower is better)
Translates to: LRSRYVFSRGPPCFE*SFSLQGASPRRVDP
Trigger: CGGGTCCACGCGCCGCGGGGATGCGCCCTGCAAGCTGAAACTTCATTCAAAGCAAGGCGGCCCACGAGAGAACACGTAGCGACTCCGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS GCA 90 bp ACGTGTTCTCTCGTGGGCCGCCTTGCTTTGAATGAAGTTTCAGCTTaGAGGGCGCATCCCCGCGGCGCGTGGACCCGAGAGCTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: TCSLVGRLALNEVSA*RAHPRGAWTRELGE
Trigger: CTCGCCAAGCTCTCGGGTCCACGCGCCGCGGGGATGCGCCCTGCAAGCTGAAACTTCATTCAAAGCAAGGCGGCCCACGAGAGAACACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS TCA 90 bp TGGGGCTCTCCTCCTCCCGGCGTCCGCATCCACCGTAGGAGGAAATaGATGCCTTGCGGTCTTAGTGCCCGCACGTTTGTCCATCACCCT +
Preference number: 5 (lower is better)
Translates to: WGSPPPGVRIHRRRK*MPCGLSARTFVHHP
Trigger: AGGGTGATGGACAAACGTGCGGGCACTAAGACCGCAAGGCATTCATTTCCTCCTACGGTGGATGCGGACGCCGGGAGGAGGAGAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394607.7
CDS GCA 90 bp GGACAAGGTGATGAACATGGCAAACTTCCGGGAGACTCGGAAACCTaGCGCCCGCAAGGCATAGTAAGAGTACATCACGGCGTGCACGCC +
Preference number: 5 (lower is better)
Translates to: GQGDEHGKLPGDSET*RPQGIVRVHHGVHA
Trigger: GGCGTGCACGCCGTGATGTACTCTTACTATGCCTTGCGGGCGGCAGGTTTCCGAGTCTCCCGGAAGTTTGCCATGTTCATCACCTTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS GCA 90 bp GCTCTCCTCCTCCCGGCGTCCGCATCCACCGTAGGAGGAAATGAATaGCTTGCGGTCTTAGTGCCCGCACGTTTGTCCATCACCCTTTTT +
Preference number: 5 (lower is better)
Translates to: ALLLPASASTVGGNE*LAVLVPARLSITLF
Trigger: AAAAAGGGTGATGGACAAACGTGCGGGCACTAAGACCGCAAGGCATTCATTTCCTCCTACGGTGGATGCGGACGCCGGGAGGAGGAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394607.7
CDS CCA 90 bp GCATCCCCGCGGCGCGTGGACCCGAGAGCTTGGCGAGTAAACGATTaGGAAATAGTAAAACCTGCCAGCTCTCTTGCAAGAGAACTCCGG +
Preference number: 5 (lower is better)
Translates to: ASPRRVDPRAWRVND*EIVKPASSLARELR
Trigger: CCGGAGTTCTCTTGCAAGAGAGCTGGCAGGTTTTACTATTTCCCAATCGTTTACTCGCCAAGCTCTCGGGTCCACGCGCCGCGGGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS CCA 90 bp TTCAGCTTGCAGGGCGCATCCCCGCGGCGCGTGGACCCGAGAGCTTaGCGAGTAAACGATTGGGAAATAGTAAAACCTGCCAGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: FSLQGASPRRVDPRA*RVNDWEIVKPASSL
Trigger: AAGAGAGCTGGCAGGTTTTACTATTTCCCAATCGTTTACTCGCCAAGCTCTCGGGTCCACGCGCCGCGGGGATGCGCCCTGCAAGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTTCTCCTCACAGCCTCTaGAATCAGACCTTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTSPHSL*NQTLAN
Trigger: ATTGGCCAAGGTCTGATTCAAGAGGCTGTGAGGAGA...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTACTCATGGACTTGGCTaGATGCTCAGACCTAGTGTA +
Preference number: 5 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTTHGLG*MLRPSV
Trigger: TACACTAGGTCTGAGCATCAAGCCAAGTCCATGAGT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTTTAGTGCCCGCACGTTaGTCCATCACCCTTTTTACT +
Preference number: 5 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTLVPAR*SITLFT
Trigger: AGTAAAAAGGGTGATGGACAAACGTGCGGGCACTAA...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394607.7
CDS GCA 90 bp GGACCCGAGAGCTTGGCGAGTAAACGATTGGGAAATAGTAAAACCTaGCAGCTCTCTTGCAAGAGAACTCCGGGCAAATCTACGTTGAGA +
Preference number: 5 (lower is better)
Translates to: GPESLASKRLGNSKT*QLSCKRTPGKSTLR
Trigger: TCTCAACGTAGATTTGCCCGGAGTTCTCTTGCAAGAGAGCTGGCAGGTTTTACTATTTCCCAATCGTTTACTCGCCAAGCTCTCGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTACATTCCTCCATCAGTaGTGTCTCACCTATGAACCA +
Preference number: 5 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTTFLHQ*CLTYEP
Trigger: TGGTTCATAGGTGAGACACAACTGATGGAGGAATGT...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTGGCAGCTATAAAAACTaGCCTGCCCAAGTTTTTCTG +
Preference number: 5 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTGSYKN*PAQVFL
Trigger: CAGAAAAACTTGGGCAGGCAAGTTTTTATAGCTGCC...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTGCACTGACACTTGTTTaGTGTAAGTCTTGGACACCA +
Preference number: 5 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTALTLV*CKSWTP
Trigger: TGGTGTCCAAGACTTACACAAAACAAGTGTCAGTGC...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTACACTGACATGTTCATaGGGGCTGATCTTCGGAGTC +
Preference number: 5 (lower is better)
Translates to: QATSCLNMSRQADLFETSTLTCS*GLIFGV
Trigger: GACTCCGAAGATCAGCCCCAATGAACATGTCAGTGT...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTTCCTCTGCTTCTGGCTaGCTTTTGTTCTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: QATSCLNMSRQADLFETSSSASG*LLFSLV
Trigger: GACAAGGGAGAACAAAAGCAAGCCAGAAGCAGAGGA...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTCTCTTTAGCTATGAGTaGTGCCATATGGCTCGCAGA +
Preference number: 5 (lower is better)
Translates to: QATSCLNMSRQADLFETSLFSYE*CHMARR
Trigger: TCTGCGAGCCATATGGCACAACTCATAGCTAAAGAG...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS GCA 90 bp TTGGCGAGTAAACGATTGGGAAATAGTAAAACCTGCCAGCTCTCTTaGAAGAGAACTCCGGGCAAATCTACGTTGAGATCACCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: LASKRLGNSKTCQLS*KRTPGKSTLRSPVK
Trigger: CTTCACTGGTGATCTCAACGTAGATTTGCCCGGAGTTCTCTTGCAAGAGAGCTGGCAGGTTTTACTATTTCCCAATCGTTTACTCGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGTTTTCCTGCATCCATaGGATGGCTTCATTCTCGTT +
Preference number: 5 (lower is better)
Translates to: QATSCLNMSRQADLFETSVFLHP*DGFILV
Trigger: AACGAGAATGAAGCCATCCAATGGATGCAGGAAAAC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp CAGAACCCTTCATGGCCGGCCCGAATGGGTTATAAATGTGGCTTGACCCTGACTCAAAATGAAAGTGCTTaGGAAGCATCATTTAGAGTC +
Preference number: 5 (lower is better)
Translates to: QNPSWPARMGYKCGLTLTQNESA*EASFRV
Trigger: GACTCTAAATGATGCTTCCAAAGCACTTTCATTTTG...AGTCAGGGTCAAGCCACATTTATAACCCATTCGGGCCGGCCATGAAGGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTAGAGGCTGTTGCTCATaGGCAAACTGGGACCTACCC +
Preference number: 5 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFRGCCS*ANWDLP
Trigger: GGGTAGGTCCCAGTTTGCCAATGAGCAACAGCCTCT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGAGAGGCTGTTGCTCATaGGCAAACTGGGACCTACCC +
Preference number: 5 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMRGCCS*ANWDLP
Trigger: GGGTAGGTCCCAGTTTGCCAATGAGCAACAGCCTCT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATATCAAAGTGCCACTTTaGAGCTCTCCCAAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDIKVPL*SSPKPH
Trigger: GTGGGGCTTGGGAGAGCTCAAAAGTGGCACTTTGAT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATTCTCCTCACAGCCTCTaGAATCAGACCTTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDSPHSL*NQTLAN
Trigger: ATTGGCCAAGGTCTGATTCAAGAGGCTGTGAGGAGA...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTATCAAAGTGCCACTTTaGAGCTCTCCCAAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFIKVPL*SSPKPH
Trigger: GTGGGGCTTGGGAGAGCTCAAAAGTGGCACTTTGAT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS CCA 90 bp GTCCATTGTAAAAACCCTGGTCACAAACTGACTGCTTCAGGCCTTTaGTCATCAAAATGTACACCATATAAGCACCAGTTCGAAGAGCAC +
Preference number: 5 (lower is better)
Translates to: VHCKNPGHKLTASGL*SSKCTPYKHQFEEH
Trigger: GTGCTCTTCGAACTGGTGCTTATATGGTGTACATTTTGATGACCAAAGGCCTGAAGCAGTCAGTTTGTGACCAGGGTTTTTACAATGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000302274.8
ENST00000394607.7
ENST00000503885.1
ENST00000506461.1
ENST00000506625.5
ENST00000507451.1
ENST00000514184.5
CDS-3UTR CAA 90 bp AGCTTCTGCTTCCTCAGAATAATGAATATTGTATCTCCTAGTTCGGGTGCTTTGACACTGACATGTTCATaGGGGCTGATCTTCGGAGTC +
Preference number: 5 (lower is better)
Translates to: SFCFLRIMNIVSPSSGALTLTCS*GLIFGV
Trigger: GACTCCGAAGATCAGCCCCAATGAACATGTCAGTGT...CAAAGCACCCGAACTAGGAGATACAATATTCATTATTCTGAGGAAGCAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTTCAGCCAAACTTGCCTaGAAGTTTGTTGTAGTATTG +
Preference number: 5 (lower is better)
Translates to: QATSCLNMSRQADLFETSSAKLA*KFVVVL
Trigger: CAATACTACAACAAACTTCAAGGCAAGTTTGGCTGA...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTGTTTGCATGGATTCTTaGTTCACTGCTCAAACCATT +
Preference number: 5 (lower is better)
Translates to: QATSCLNMSRQADLFETSVCMDS*FTAQTI
Trigger: AATGGTTTGAGCAGTGAACAAAGAATCCATGCAAAC...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATACTCATGGACTTGGCTaGATGCTCAGACCTAGTGTA +
Preference number: 5 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDTHGLG*MLRPSV
Trigger: TACACTAGGTCTGAGCATCAAGCCAAGTCCATGAGT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATCTCTTGAATCAGACCTaGGCCAATCCAGTTACTCTG +
Preference number: 5 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDLLNQT*ANPVTL
Trigger: CAGAGTAACTGGATTGGCCAAGGTCTGATTCAAGAG...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATATGTGGTGGTGGATCTaGGCAAAGTCTCTTCCTGAT +
Preference number: 5 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDMWWWI*AKSLPD
Trigger: ATCAGGAAGAGACTTTGCCAAGATCCACCACCACAT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTAGCATACAGAGGCTGTaGCTCATTGGCAAACTGGGA +
Preference number: 5 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFSIQRL*LIGKLG
Trigger: TCCCAGTTTGCCAATGAGCAACAGCCTCTGTATGCT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS GCA 90 bp ACTAATGGCTTCCTCAGTTCAAACTTTGCTCGTTTATTCATTAGGTaGCGACCACCGAATATAAAGGCAGCATACAGAGCAGAAAACAGG +
Preference number: 5 (lower is better)
Translates to: TNGFLSSNFARLFIR*RPPNIKAAYRAENR
Trigger: CCTGTTTTCTGCTCTGTATGCTGCCTTTATATTCGGTGGTCGGCACCTAATGAATAAACGAGCAAAGTTTGAACTGAGGAAGCCATTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302274.8
ENST00000394607.7
ENST00000503885.1
ENST00000506461.1
ENST00000506625.5
ENST00000514184.5
CDS-3UTR CAA 90 bp CAAGCAACCTCCTGCCTGAATATGTCTAGACAGGCAGACCTGTTTGAAACGAGTTCCTCAGTTCAAACTTaGCTCGTTTATTCATTAGGT +
Preference number: 5 (lower is better)
Translates to: QATSCLNMSRQADLFETSSSVQT*LVYSLG
Trigger: ACCTAATGAATAAACGAGCAAAGTTTGAACTGAGGA...ACTCGTTTCAAACAGGTCTGCCTGTCTAGACATATTCAGGCAGGAGGTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCTCTTGAATCAGACCTaGGCCAATCCAGTTACTCTG +
Preference number: 5 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFLLNQT*ANPVTL
Trigger: CAGAGTAACTGGATTGGCCAAGGTCTGATTCAAGAG...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAAGCATACAGAGGCTGTaGCTCATTGGCAAACTGGGA +
Preference number: 5 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSSIQRL*LIGKLG
Trigger: TCCCAGTTTGCCAATGAGCAACAGCCTCTGTATGCT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGGTTTTCCTGCATCCATaGGATGGCTTCATTCTCGTT +
Preference number: 5 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMVFLHP*DGFILV
Trigger: AACGAGAATGAAGCCATCCAATGGATGCAGGAAAAC...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp ATCAGCTTCTGCTTCCTCAGAATAATGAATATTGTATCTCCTAGTTCGGGTGCTGTTTTCCTGCATCCATaGGATGGCTTCATTCTCGTT +
Preference number: 5 (lower is better)
Translates to: ISFCFLRIMNIVSPSSGAVFLHP*DGFILV
Trigger: AACGAGAATGAAGCCATCCAATGGATGCAGGAAAAC...AGCACCCGAACTAGGAGATACAATATTCATTATTCTGAGGAAGCAGAAGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR CAA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATACTGTGGGGTTTCATTaGGAAAGTTATGAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDTVGFH*ESYECV
Trigger: CACACACTCATAACTTTCCAAATGAAACCCCACAGT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTGGCAGCTATAAAAACTaGCCTGCCCAAGTTTTTCTG +
Preference number: 5 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFGSYKN*PAQVFL
Trigger: CAGAAAAACTTGGGCAGGCAAGTTTTTATAGCTGCC...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAATGTGGTGGTGGATCTaGGCAAAGTCTCTTCCTGAT +
Preference number: 5 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSMWWWI*AKSLPD
Trigger: ATCAGGAAGAGACTTTGCCAAGATCCACCACCACAT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATTACTACAATGCAGTGTaGGTTTGGACGTCTAGTGAA +
Preference number: 5 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDYYNAV*VWTSSE
Trigger: TTCACTAGACGTCCAAACCAACACTGCATTGTAGTA...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAGGTTATAAATGTGGCTaGACCCTGACTTATGGGACC +
Preference number: 5 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSGYKCG*TLTYGT
Trigger: GGTCCCATAAGTCAGGGTCAAGCCACATTTATAACC...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATCAACATTGCTGTGATTaGCTCTGTGAGGCTTATATG +
Preference number: 5 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDQHCCD*LCEAYM
Trigger: CATATAAGCCTCACAGAGCAAATCACAGCAATGTTG...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp TATCTCCTAGTTCGGGTGCTTTGCTTAGCACAAATGCATAAGCCCAGAATTTGCTCCTCAGTTCAAACTTaGCTCGTTTATTCATTAGGT +
Preference number: 5 (lower is better)
Translates to: YLLVRVLCLAQMHKPRICSSVQT*LVYSLG
Trigger: ACCTAATGAATAAACGAGCAAAGTTTGAACTGAGGA...GCAAATTCTGGGCTTATGCATTTGTGCTAAGCAAAGCACCCGAACTAGGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514184.5
CDS-3UTR CAA 90 bp TCATCAGCTCTCACTTTAATGTGTATACACTACTGGCCAAATGTGGTGGTGGATATCCATGGTTTTAATTaGGTACTTTGGCCTTGCGTT +
Preference number: 5 (lower is better)
Translates to: SSALTLMCIHYWPNVVVDIHGFN*VLWPCV
Trigger: AACGCAAGGCCAAAGTACCAAATTAAAACCATGGAT...ATCCACCACCACATTTGGCCAGTAGTGTATACACATTAAAGTGAGAGCTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGAGAGGCAAAGTCTATTaGTTCTCTACTCTCCTCACA +
Preference number: 5 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMRGKVY*FSTLLT
Trigger: TGTGAGGAGAGTAGAGAACAAATAGACTTTGCCTCT...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTAGAAAGACACTACATTaGACTACTGGGACATTCTGG +
Preference number: 5 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFRKTLH*TTGTFW
Trigger: CCAGAATGTCCCAGTAGTCAAATGTAGTGTCTTTCT...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AATGTTAACTGGCAGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAACATTGCTGTGATTaGCTCTGTGAGGCTTATATG +
Preference number: 5 (lower is better)
Translates to: NVNWQQDYLCSSQFSGRFQHCCD*LCEAYM
Trigger: CATATAAGCCTCACAGAGCAAATCACAGCAATGTTG...AAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCTGCCAGTTAACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS TCA 90 bp ACATCACCCAGTTTTCCTGCATCCATTGGATGGCTTCATTCTCGTTaGACTGCTTTTCGAATTCATATTCTTGTAAAGTCAACACTGACA +
Preference number: 5 (lower is better)
Translates to: TSPSFPASIGWLHSR*TAFRIHILVKSTLT
Trigger: TGTCAGTGTTGACTTTACAAGAATATGAATTCGAAAAGCAGTTCAACGAGAATGAAGCCATCCAATGGATGCAGGAAAACTGGGTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513003.1
CDS-3UTR CAA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAAAGCTGCCTTGGGTTTaGTGTTTGCTCATGTTTTGT +
Preference number: 5 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSKLPWV*CLLMFC
Trigger: ACAAAACATGAGCAAACACAAAACCCAAGGCAGCTT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATCTTCCAGTCATGACTaGGTTTGCATGGATTCTTTG +
Preference number: 5 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSSSSHD*VCMDSL
Trigger: CAAAGAATCCATGCAAACCAAGTCATGACTGGAAGA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAAGAGGCAAAGTCTATTaGTTCTCTACTCTCCTCACA +
Preference number: 5 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSRGKVY*FSTLLT
Trigger: TGTGAGGAGAGTAGAGAACAAATAGACTTTGCCTCT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCAAGAAAGACACTACATTaGACTACTGGGACATTCTGG +
Preference number: 5 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSRKTLH*TTGTFW
Trigger: CCAGAATGTCCCAGTAGTCAAATGTAGTGTCTTTCT...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS-3UTR CAA 90 bp AGCAGGATTATCTATGCAGCAGTCAATTCTCTGGTAGGTTTCAGATTTGTCATGCAAAATGAAAGTGCTTaGGAAGCATCATTTAGAGTC +
Preference number: 5 (lower is better)
Translates to: SRIIYAAVNSLVGFRFVMQNESA*EASFRV
Trigger: GACTCTAAATGATGCTTCCAAAGCACTTTCATTTTG...CATGACAAATCTGAAACCTACCAGAGAATTGACTGCTGCATAGATAATCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS TCA 90 bp ATTTCTTCCAGTTTTCCTGCATCCATTGGATGGCTTCATTCTCGTTaGACTGCTTTTCGAATTCATATTCTTGTAAAGTCAACACTGACA +
Preference number: 5 (lower is better)
Translates to: ISSSFPASIGWLHSR*TAFRIHILVKSTLT
Trigger: TGTCAGTGTTGACTTTACAAGAATATGAATTCGAAAAGCAGTTCAACGAGAATGAAGCCATCCAATGGATGCAGGAAAACTGGAAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302274.8
ENST00000394607.7
ENST00000503885.1
ENST00000506461.1
ENST00000506625.5
ENST00000514184.5
CDS-3UTR CAA 90 bp AGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATCCTCAGTTCAAACTTaGCTCGTTTATTCATTAGGT +
Preference number: 5 (lower is better)
Translates to: SCVSPMNQHQDIIDCSQSSSVQT*LVYSLG
Trigger: ACCTAATGAATAAACGAGCAAAGTTTGAACTGAGGA...TGATTGTGAGCAGTCTATAATGTCTTGATGTTGGTTCATAGGTGAGACACAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS CCA 72 bp AGCATTGCCTGCGCCTCCGCTCCCAGCTCCTCTCTCTaGGGCTCTCCTCCTCCCGGCGTCCGCATCCACCGT +
Preference number: 6 (lower is better)
Translates to: SIACASAPSSSL*GSPPPGVRIHR
Trigger: ACGGTGGATGCGGACGCCGGGAGGAGGAGAGCCCCAGAGAGAGGAGCTGGGAGCGGAGGCGCAGGCAATGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302274.8
CDS CCA 72 bp CGTGTTCTCTGCGCCTCCGCTCCCAGCTCCTCTCTCTaGGGCTCTCCTCCTCCCGGCGTCCGCATCCACCGT +
Preference number: 6 (lower is better)
Translates to: RVLCASAPSSSL*GSPPPGVRIHR
Trigger: ACGGTGGATGCGGACGCCGGGAGGAGGAGAGCCCCAGAGAGAGGAGCTGGGAGCGGAGGCGCAGAGAACACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394607.7
CDS CCA 72 bp GGAGGGGAGGGGAGCACAGGTAGGCGATCTGGACTGTaGCATCTCTCCCGCCTTCCCTGTCGCGCAGACATC +
Preference number: 6 (lower is better)
Translates to: GGEGSTGRRSGL*HLSRLPCRADI
Trigger: GATGTCTGCGCGACAGGGAAGGCGGGAGAGATGCCACAGTCCAGATCGCCTACCTGTGCTCCCCTCCCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513003.1
CDS TCA 72 bp CGCTACGTGTTCTCTCGTGGGCCGCCTTGCTTTGAATaGAGTTTCAGCTTGCAGGGCGCATCCCCGCGGCGC +
Preference number: 6 (lower is better)
Translates to: RYVFSRGPPCFE*SFSLQGASPRR
Trigger: GCGCCGCGGGGATGCGCCCTGCAAGCTGAAACTTCATTCAAAGCAAGGCGGCCCACGAGAGAACACGTAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS TCA 72 bp CCTCCTCCCGGCGTCCGCATCCACCGTAGGAGGAAATaGATGCCTTGCGGTCTTAGTGCCCGCACGTTTGTC +
Preference number: 6 (lower is better)
Translates to: PPPGVRIHRRRK*MPCGLSARTFV
Trigger: GACAAACGTGCGGGCACTAAGACCGCAAGGCATTCATTTCCTCCTACGGTGGATGCGGACGCCGGGAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394607.7
CDS CCA 72 bp CAGGGCGCATCCCCGCGGCGCGTGGACCCGAGAGCTTaGCGAGTAAACGATTGGGAAATAGTAAAACCTGCC +
Preference number: 6 (lower is better)
Translates to: QGASPRRVDPRA*RVNDWEIVKPA
Trigger: GGCAGGTTTTACTATTTCCCAATCGTTTACTCGCCAAGCTCTCGGGTCCACGCGCCGCGGGGATGCGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS CAA 72 bp GCAGGGCGCATCCCCGCGGCGCGTGGACCCGAGAGCTaGGCGAGTAAACGATTGGGAAATAGTAAAACCTGC +
Preference number: 6 (lower is better)
Translates to: AGRIPAARGPES*ASKRLGNSKTC
Trigger: GCAGGTTTTACTATTTCCCAATCGTTTACTCGCCAAGCTCTCGGGTCCACGCGCCGCGGGGATGCGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS TCA 72 bp GAGTCGCTACGTGTTCTCTCGTGGGCCGCCTTGCTTTaGATGAAGTTTCAGCTTGCAGGGCGCATCCCCGCG +
Preference number: 6 (lower is better)
Translates to: ESLRVLSWAALL*MKFQLAGRIPA
Trigger: CGCGGGGATGCGCCCTGCAAGCTGAAACTTCATTCAAAGCAAGGCGGCCCACGAGAGAACACGTAGCGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS GCA 72 bp CTCCCGGCGTCCGCATCCACCGTAGGAGGAAATGAATaGCTTGCGGTCTTAGTGCCCGCACGTTTGTCCATC +
Preference number: 6 (lower is better)
Translates to: LPASASTVGGNE*LAVLVPARLSI
Trigger: GATGGACAAACGTGCGGGCACTAAGACCGCAAGGCATTCATTTCCTCCTACGGTGGATGCGGACGCCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394607.7
CDS CAA 72 bp GGAGTCGCTACGTGTTCTCTCGTGGGCCGCCTTGCTTaGAATGAAGTTTCAGCTTGCAGGGCGCATCCCCGC +
Preference number: 6 (lower is better)
Translates to: GVATCSLVGRLA*NEVSACRAHPR
Trigger: GCGGGGATGCGCCCTGCAAGCTGAAACTTCATTCAAAGCAAGGCGGCCCACGAGAGAACACGTAGCGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS CAA 90 bp CGCATCCCCGCGGCGCGTGGACCCGAGAGCTTGGCGAGTAAACGATaGGGAAATAGTAAAACCTGCCAGCTCTCTTGCAAGAGAACTCCG +
Preference number: 6 (lower is better)
Translates to: RIPAARGPESLASKR*GNSKTCQLSCKRTP
Trigger: CGGAGTTCTCTTGCAAGAGAGCTGGCAGGTTTTACTATTTCCCAATCGTTTACTCGCCAAGCTCTCGGGTCCACGCGCCGCGGGGATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS CAA 90 bp TTTCAGCTTGCAGGGCGCATCCCCGCGGCGCGTGGACCCGAGAGCTaGGCGAGTAAACGATTGGGAAATAGTAAAACCTGCCAGCTCTCT +
Preference number: 6 (lower is better)
Translates to: FQLAGRIPAARGPES*ASKRLGNSKTCQLS
Trigger: AGAGAGCTGGCAGGTTTTACTATTTCCCAATCGTTTACTCGCCAAGCTCTCGGGTCCACGCGCCGCGGGGATGCGCCCTGCAAGCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS GCA 72 bp GATGAACATGGCAAACTTCCGGGAGACTCGGAAACCTaGCGCCCGCAAGGCATAGTAAGAGTACATCACGGC +
Preference number: 6 (lower is better)
Translates to: DEHGKLPGDSET*RPQGIVRVHHG
Trigger: GCCGTGATGTACTCTTACTATGCCTTGCGGGCGGCAGGTTTCCGAGTCTCCCGGAAGTTTGCCATGTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302274.8
ENST00000394607.7
CDS CAA 72 bp GCGGCGCGTGGACCCGAGAGCTTGGCGAGTAAACGATaGGGAAATAGTAAAACCTGCCAGCTCTCTTGCAAG +
Preference number: 6 (lower is better)
Translates to: AARGPESLASKR*GNSKTCQLSCK
Trigger: CTTGCAAGAGAGCTGGCAGGTTTTACTATTTCCCAATCGTTTACTCGCCAAGCTCTCGGGTCCACGCGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS CCA 72 bp CGGCGCGTGGACCCGAGAGCTTGGCGAGTAAACGATTaGGAAATAGTAAAACCTGCCAGCTCTCTTGCAAGA +
Preference number: 6 (lower is better)
Translates to: RRVDPRAWRVND*EIVKPASSLAR
Trigger: TCTTGCAAGAGAGCTGGCAGGTTTTACTATTTCCCAATCGTTTACTCGCCAAGCTCTCGGGTCCACGCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS CAA 72 bp CTGTCGCGCAGACATCACCCAGTTTTCCTGCATCCATaGGATGGCTTCATTCTCGTTGAACTGCTTTTCGAA +
Preference number: 6 (lower is better)
Translates to: LSRRHHPVFLHP*DGFILVELLFE
Trigger: TTCGAAAAGCAGTTCAACGAGAATGAAGCCATCCAATGGATGCAGGAAAACTGGGTGATGTCTGCGCGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513003.1
CDS GCA 72 bp AGCTTGGCGAGTAAACGATTGGGAAATAGTAAAACCTaGCAGCTCTCTTGCAAGAGAACTCCGGGCAAATCT +
Preference number: 6 (lower is better)
Translates to: SLASKRLGNSKT*QLSCKRTPGKS
Trigger: AGATTTGCCCGGAGTTCTCTTGCAAGAGAGCTGGCAGGTTTTACTATTTCCCAATCGTTTACTCGCCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS CCA 72 bp TGTCGCGCAGACATCACCCAGTTTTCCTGCATCCATTaGATGGCTTCATTCTCGTTGAACTGCTTTTCGAAT +
Preference number: 6 (lower is better)
Translates to: CRADITQFSCIH*MASFSLNCFSN
Trigger: ATTCGAAAAGCAGTTCAACGAGAATGAAGCCATCCAATGGATGCAGGAAAACTGGGTGATGTCTGCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513003.1
CDS TCA 72 bp GCTGACAGGTCCATTGTAAAAACCCTGGTCACAAACTaGCTGCTTCAGGCCTTTGGTCATCAAAATGTACAC +
Preference number: 6 (lower is better)
Translates to: ADRSIVKTLVTN*LLQAFGHQNVH
Trigger: GTGTACATTTTGATGACCAAAGGCCTGAAGCAGTCAGTTTGTGACCAGGGTTTTTACAATGGACCTGTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302274.8
ENST00000394607.7
ENST00000506461.1
ENST00000506625.5
ENST00000507451.1
ENST00000514184.5
CDS CAA 72 bp GAGACCAGAGCACTAATGGCTTCCTCAGTTCAAACTTaGCTCGTTTATTCATTAGGTGCCGACCACCGAATA +
Preference number: 6 (lower is better)
Translates to: ETRALMASSVQT*LVYSLGADHRI
Trigger: TATTCGGTGGTCGGCACCTAATGAATAAACGAGCAAAGTTTGAACTGAGGAAGCCATTAGTGCTCTGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302274.8
ENST00000394607.7
ENST00000503885.1
ENST00000506461.1
ENST00000506625.5
ENST00000514184.5
CDS GCA 72 bp AAACGATTGGGAAATAGTAAAACCTGCCAGCTCTCTTaGAAGAGAACTCCGGGCAAATCTACGTTGAGATCA +
Preference number: 6 (lower is better)
Translates to: KRLGNSKTCQLS*KRTPGKSTLRS
Trigger: TGATCTCAACGTAGATTTGCCCGGAGTTCTCTTGCAAGAGAGCTGGCAGGTTTTACTATTTCCCAATCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506625.5
CDS GCA 72 bp TTCCTCAGTTCAAACTTTGCTCGTTTATTCATTAGGTaGCGACCACCGAATATAAAGGCAGCATACAGAGCA +
Preference number: 6 (lower is better)
Translates to: FLSSNFARLFIR*RPPNIKAAYRA
Trigger: TGCTCTGTATGCTGCCTTTATATTCGGTGGTCGGCACCTAATGAATAAACGAGCAAAGTTTGAACTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302274.8
ENST00000394607.7
ENST00000503885.1
ENST00000506461.1
ENST00000506625.5
ENST00000514184.5
CDS CAA 90 bp GACATCACCCAGTTTTCCTGCATCCATTGGATGGCTTCATTCTCGTaGAACTGCTTTTCGAATTCATATTCTTGTAAAGTCAACACTGAC +
Preference number: 6 (lower is better)
Translates to: DITQFSCIHWMASFS*NCFSNSYSCKVNTD
Trigger: GTCAGTGTTGACTTTACAAGAATATGAATTCGAAAAGCAGTTCAACGAGAATGAAGCCATCCAATGGATGCAGGAAAACTGGGTGATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513003.1
CDS CCA 72 bp AACAGGAAAGATTTCTTCCAGTTTTCCTGCATCCATTaGATGGCTTCATTCTCGTTGAACTGCTTTTCGAAT +
Preference number: 6 (lower is better)
Translates to: NRKDFFQFSCIH*MASFSLNCFSN
Trigger: ATTCGAAAAGCAGTTCAACGAGAATGAAGCCATCCAATGGATGCAGGAAAACTGGAAGAAATCTTTCCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302274.8
ENST00000394607.7
ENST00000503885.1
ENST00000506461.1
ENST00000506625.5
ENST00000514184.5
CDS CAA 72 bp AAACAGGAAAGATTTCTTCCAGTTTTCCTGCATCCATaGGATGGCTTCATTCTCGTTGAACTGCTTTTCGAA +
Preference number: 6 (lower is better)
Translates to: KQERFLPVFLHP*DGFILVELLFE
Trigger: TTCGAAAAGCAGTTCAACGAGAATGAAGCCATCCAATGGATGCAGGAAAACTGGAAGAAATCTTTCCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302274.8
ENST00000394607.7
ENST00000503885.1
ENST00000506461.1
ENST00000506625.5
ENST00000514184.5
CDS CAA 90 bp GATTTCTTCCAGTTTTCCTGCATCCATTGGATGGCTTCATTCTCGTaGAACTGCTTTTCGAATTCATATTCTTGTAAAGTCAACACTGAC +
Preference number: 6 (lower is better)
Translates to: DFFQFSCIHWMASFS*NCFSNSYSCKVNTD
Trigger: GTCAGTGTTGACTTTACAAGAATATGAATTCGAAAAGCAGTTCAACGAGAATGAAGCCATCCAATGGATGCAGGAAAACTGGAAGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302274.8
ENST00000394607.7
ENST00000503885.1
ENST00000506461.1
ENST00000506625.5
ENST00000514184.5
CDS CCA 72 bp CTCACATCAACCATACTTAGAAGACTGGTTGGCCACTaGCAGGAAATAGGCATAAGAATCATATTATTTGTA +
Preference number: 6 (lower is better)
Translates to: LTSTILRRLVGH*QEIGIRIILFV
Trigger: TACAAATAATATGATTCTTATGCCTATTTCCTGCCAGTGGCCAACCAGTCTTCTAAGTATGGTTGATGTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507451.1
CDS TCA 72 bp AGTTTTCCTGCATCCATTGGATGGCTTCATTCTCGTTaGACTGCTTTTCGAATTCATATTCTTGTAAAGTCA +
Preference number: 6 (lower is better)
Translates to: SFPASIGWLHSR*TAFRIHILVKS
Trigger: TGACTTTACAAGAATATGAATTCGAAAAGCAGTTCAACGAGAATGAAGCCATCCAATGGATGCAGGAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302274.8
ENST00000394607.7
ENST00000503885.1
ENST00000506461.1
ENST00000506625.5
ENST00000513003.1
ENST00000514184.5