RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELOA (Homo sapiens)

Ensembl gene IDs: ENSG00000011007

Ensembl transcript IDs: ENST00000418390.6, ENST00000487554.1, ENST00000609199.1, ENST00000613537.4

Found 506 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATCTTCAGAATTCTAAAGTGTGCTCCAGGCAGGGAGGCGGGGCTGTaGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTGCAGGACTC +
Preference number: 1 (lower is better)
Translates to: IFRILKCAPGREAGL*HAGSQGQHLQTAGL
Trigger: GAGTCCTGCAGTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGGAGCACACTTTAGAATTCTGAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
3UTR CCA 90 bp GTTAGTAAGAAAGAGATGCACCTGCACAGGAATGCACAGCAACAGTaGGGAGGGCCTGAGGTGGAGTCCGCCGAGCACCCTGTCGCCCCA +
Preference number: 1 (lower is better)
Translates to: VSKKEMHLHRNAQQQ*GGPEVESAEHPVAP
Trigger: TGGGGCGACAGGGTGCTCGGCGGACTCCACCTCAGGCCCTCCCCACTGTTGCTGTGCATTCCTGTGCAGGTGCATCTCTTTCTTACTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CCA 90 bp AGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTaGAGATGCCCAGTCCTCTGTCTGGACCAGAGTCCACACAGAGCT +
Preference number: 1 (lower is better)
Translates to: SAHSLPYVQQVLCRL*RCPVLCLDQSPHRA
Trigger: AGCTCTGTGTGGACTCTGGTCCAGACAGAGGACTGGGCATCTCCAGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR TCA 90 bp CTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCCCCATCCTaGCGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCC +
Preference number: 1 (lower is better)
Translates to: LFNWNLMDPMWFPPS*RCGSDTLPKLVLPS
Trigger: GGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGGGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR GCA 90 bp AGCACCTCCCTTAATAAATACCAGTTAGTAAGAAAGAGATGCACCTaGACAGGAATGCACAGCAACAGTGGGGAGGGCCTGAGGTGGAGT +
Preference number: 1 (lower is better)
Translates to: STSLNKYQLVRKRCT*TGMHSNSGEGLRWS
Trigger: ACTCCACCTCAGGCCCTCCCCACTGTTGCTGTGCATTCCTGTGCAGGTGCATCTCTTTCTTACTAACTGGTATTTATTAAGGGAGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR GCA 90 bp TGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAAATCCTaGCTTAAACACACTCAGAAGGTAGAAAACACTTCAGCAGCAAAG +
Preference number: 1 (lower is better)
Translates to: CGSDTLPKLVLPSKS*LKHTQKVENTSAAK
Trigger: CTTTGCTGCTGAAGTGTTTTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CCA 90 bp TATCTCAAATGTATGGCATCTACCTCTACCTGGGTCACAACCAAGTaGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGC +
Preference number: 1 (lower is better)
Translates to: YLKCMASTSTWVTTK*VSTRSVFLDSQQGS
Trigger: GCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGAGGTAGATGCCATACATTTGAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR GCA 90 bp CAATCAGAAACTGGAAATTGTAAAAGTGGGAGGTGGGGAGTTCTGTaGAAATCAATCTCCCAAGGTTCTGCGTCCTCTAGTGAGCCTCAA +
Preference number: 1 (lower is better)
Translates to: QSETGNCKSGRWGVL*KSISQGSASSSEPQ
Trigger: TTGAGGCTCACTAGAGGACGCAGAACCTTGGGAGATTGATTTGCACAGAACTCCCCACCTCCCACTTTTACAATTTCCAGTTTCTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CCA 90 bp TTCCTTAAGGACGCATATCTCAAATGTATGGCATCTACCTCTACCTaGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGAC +
Preference number: 1 (lower is better)
Translates to: FLKDAYLKCMASTST*VTTKWVSTRSVFLD
Trigger: GTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGAGGTAGATGCCATACATTTGAGATATGCGTCCTTAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CCA 90 bp TCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTATaGCATCTACCTCTACCTGGGTCACAACCAAGTGGGTTTCTACTA +
Preference number: 1 (lower is better)
Translates to: SVCLSGSLRTHISNV*HLPLPGSQPSGFLL
Trigger: TAGTAGAAACCCACTTGGTTGTGACCCAGGTAGAGGTAGATGCCATACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR GCA 90 bp AAGGTTCAAATTCATCCTGTGTCAGGTTCAAATTCATCCTGTGTCTaGTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGA +
Preference number: 1 (lower is better)
Translates to: KVQIHPVSGSNSSCV*SAAILVSWARRSFR
Trigger: TCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACAGGATGAATTTGAACCTGACACAGGATGAATTTGAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR GCA 90 bp TTTGAGAAAACTTATCAGGCTGTCACACTTACCATCCCTTCAGTCTaGTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTATGGCAT +
Preference number: 1 (lower is better)
Translates to: FEKTYQAVTLTIPSV*LSGSLRTHISNVWH
Trigger: ATGCCATACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTAAGTGTGACAGCCTGATAAGTTTTCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCTGTCCTTGTATTCCTaGCTCCCCAGATTCCATTTC +
Preference number: 2 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQLSLYS*LPRFHF
Trigger: GAAATGGAATCTGGGGAGGCAGGAATACAAGGACAG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
3UTR-3UTR GCA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAGCAGCACCTGCAGACTaGAGGACTCGGAGACCAAAA +
Preference number: 2 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPAAPAD*RTRRPK
Trigger: TTTTGGTCTCCGAGTCCTGCAGTCTGCAGGTGCTGC...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCAGGGAGGCGGGGCTGTaGCACGCAGGTTCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSREAGL*HAGSQG
Trigger: CCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCT...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAAGGGAGGCGGGGCTGTaGCACGCAGGTTCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQREAGL*HAGSQG
Trigger: CCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCT...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR TCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAACAGTGGGGAGGGCCTaGGGTGGAGTCCGCCGAGCA +
Preference number: 2 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVETVGRA*GGVRRA
Trigger: TGCTCGGCGGACTCCACCTCAGGCCCTCCCCACTGT...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTGCTGGGGCAGGAGACTaGCTTTCACTAGGCTTTCAT +
Preference number: 2 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSAGAGD*LSLGFH
Trigger: ATGAAAGCCTAGTGAAAGCCAGTCTCCTGCCCCAGC...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCGGGGAGGGCCTGAGGTaGAGTCCGCCGAGCACCCTG +
Preference number: 2 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSGEGLR*SPPSTL
Trigger: CAGGGTGCTCGGCGGACTCCACCTCAGGCCCTCCCC...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR TCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCACAGTGGGGAGGGCCTaGGGTGGAGTCCGCCGAGCA +
Preference number: 2 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSTVGRA*GGVRRA
Trigger: TGCTCGGCGGACTCCACCTCAGGCCCTCCCCACTGT...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAAGAAAGAGATGCACCTaGACAGGAATGCACAGCAAC +
Preference number: 2 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPRKRCT*TGMHSN
Trigger: GTTGCTGTGCATTCCTGTGCAGGTGCATCTCTTTCT...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATGGGGAGGGCCTGAGGTaGAGTCCGCCGAGCACCCTG +
Preference number: 2 (lower is better)
Translates to: CVCSAAILVSWARRSFRNGEGLR*SPPSTL
Trigger: CAGGGTGCTCGGCGGACTCCACCTCAGGCCCTCCCC...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR TCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATACCCTGTCGCCCCACTaGGGCTCCCTTGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: CVCSAAILVSWARRSFRNTLSPH*GSLGDR
Trigger: CCTGTCCCCAAGGGAGCCTCAGTGGGGCGACAGGGT...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAATGCAGGCTCTGGAGATaGCCAGTCCTCTGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQCRLWR*PVLCLD
Trigger: GTCCAGACAGAGGACTGGGCATCTCCAGAGCCTGCA...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCCTAGTGCTCATTCCTTaGCCTACGTGCAGCAGGTAC +
Preference number: 2 (lower is better)
Translates to: GFLLDRCSLTANKGADTALVLIP*PTCSRY
Trigger: GTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAG...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCGCTGGGGCAGGAGACTaGCTTTCACTAGGCTTTCAT +
Preference number: 2 (lower is better)
Translates to: GFLLDRCSLTANKGADTAAGAGD*LSLGFH
Trigger: ATGAAAGCCTAGTGAAAGCCAGTCTCCTGCCCCAGC...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAAATGCACAGCAACAGTaGGGAGGGCCTGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQNAQQQ*GGPEVE
Trigger: CTCCACCTCAGGCCCTCCCCACTGTTGCTGTGCATT...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR TCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACACCCTGTCGCCCCACTaGGGCTCCCTTGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYTLSPH*GSLGDR
Trigger: CCTGTCCCCAAGGGAGCCTCAGTGGGGCGACAGGGT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAAATGCACAGCAACAGTaGGGAGGGCCTGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVENAQQQ*GGPEVE
Trigger: CTCCACCTCAGGCCCTCCCCACTGTTGCTGTGCATT...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR TCA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAGACTCGCAAAAAGGATaGGGGAAAGGCTCCAGACCT +
Preference number: 2 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQDSQKG*GKGSRP
Trigger: AGGTCTGGAGCCTTTCCCTCATCCTTTTTGCGAGTC...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAACAGAATTCTAAAGTGTaGTCCAGGCAGGGAGGCGGG +
Preference number: 2 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEQNSKV*SRQGGG
Trigger: CCCGCCTCCCTGCCTGGAGCACACTTTAGAATTCTG...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAATTCCTTGCCCTACGTaGAGCAGGTACTGTGCAGGC +
Preference number: 2 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEIPCPT*SRYCAG
Trigger: GCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAAT...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCTAGTGCTCATTCCTTaGCCTACGTGCAGCAGGTAC +
Preference number: 2 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSLVLIP*PTCSRY
Trigger: GTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAG...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCGGCTACAAAAAGCCCTaGCGTGTGTGTTTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: GFLLDRCSLTANKGADTAGYKKP*RVCFSF
Trigger: GAAGGAAAAACACACACGGCAGGGCTTTTTGTAGCC...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCGCCCAGTCCTCTGTCTaGACCAGAGTCCACACAGAG +
Preference number: 2 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSAQSSV*TRVHTE
Trigger: CTCTGTGTGGACTCTGGTCCAGACAGAGGACTGGGC...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR TCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCTGTTCAACTGGAACTTaGTGGATCCCATGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: GFLLDRCSLTANKGADTACSTGT*WIPCGF
Trigger: GAAACCACATGGGATCCATCAAGTTCCAGTTGAACA...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACTGCAGGCTCTGGAGATaGCCAGTCCTCTGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYCRLWR*PVLCLD
Trigger: GTCCAGACAGAGGACTGGGCATCTCCAGAGCCTGCA...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATATTCCTTGCCCTACGTaGAGCAGGTACTGTGCAGGC +
Preference number: 2 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDIPCPT*SRYCAG
Trigger: GCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAAT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAGGCTACAAAAAGCCCTaGCGTGTGTGTTTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEGYKKP*RVCFSF
Trigger: GAAGGAAAAACACACACGGCAGGGCTTTTTGTAGCC...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATGTACTGTGCAGGCTCTaGAGATGCCCAGTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDVLCRL*RCPVLC
Trigger: ACAGAGGACTGGGCATCTCCAGAGCCTGCACAGTAC...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CAA 90 bp CTGAGGTCTCCAGTTACAGAAAACACTGGCTCTGTATCCTGGGCTTaGAGAAAACTTATCAGGCTGTCACACTTACCATCCCTTCAGTCT +
Preference number: 2 (lower is better)
Translates to: LRSPVTENTGSVSWA*RKLIRLSHLPSLQS
Trigger: AGACTGAAGGGATGGTAAGTGTGACAGCCTGATAAGTTTTCTCAAAGCCCAGGATACAGAGCCAGTGTTTTCTGTAACTGGAGACCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR TCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATTTTTCCTCTTTCCCCTaGCTCTTCGCACCAAGTCAC +
Preference number: 2 (lower is better)
Translates to: CVCSAAILVSWARRSFRNFSSFP*LFAPSH
Trigger: GTGACTTGGTGCGAAGAGTCAGGGGAAAGAGGAAAA...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACCAGAATTCTAAAGTGTaGTCCAGGCAGGGAGGCGGG +
Preference number: 2 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYQNSKV*SRQGGG
Trigger: CCCGCCTCCCTGCCTGGAGCACACTTTAGAATTCTG...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATGCATCTACCTCTACCTaGGTCACAACCAAGTGGGTT +
Preference number: 2 (lower is better)
Translates to: CVCSAAILVSWARRSFRNASTST*VTTKWV
Trigger: AACCCACTTGGTTGTGACCCAGGTAGAGGTAGATGC...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR TCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTTGCCCTCCTAAGTTCTaGTCTTGCTCCTGTTCAACT +
Preference number: 2 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCCPPKF*SCSCST
Trigger: AGTTGAACAGGAGCAAGATCAGAACTTAGGAGGGCA...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATTGGGTCACAACCAAGTaGGTTTCTACTAGATCGGTG +
Preference number: 2 (lower is better)
Translates to: CVCSAAILVSWARRSFRNWVTTK*VSTRSV
Trigger: CACCGATCTAGTAGAAACCCACTTGGTTGTGACCCA...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR TCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATTTTCCTTCATGGTGTTaGGGGGAAGGAAAGATAGGG +
Preference number: 2 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDFPSWC*GEGKIG
Trigger: CCCTATCTTTCCTTCCCCTCAACACCATGAAGGAAA...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATCTGTCCTTGTATTCCTaGCTCCCCAGATTCCATTTC +
Preference number: 2 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDLSLYS*LPRFHF
Trigger: GAAATGGAATCTGGGGAGGCAGGAATACAAGGACAG...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATAGGTGGGGAGTTCTGTaGAAATCAATCTCCCAAGGT +
Preference number: 2 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDRWGVL*KSISQG
Trigger: ACCTTGGGAGATTGATTTGCACAGAACTCCCCACCT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATACCATCCCTTCAGTCTaGTTGTCAGGTTCCTTAAGG +
Preference number: 2 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDTIPSV*LSGSLR
Trigger: CCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CAA 90 bp GAGAAAACTTATCAGGCTGTCACACTTACCATCCCTTCAGTCTGCTaGTCAGGTTCCTTAAGGACGCATATCTCAAATGTATGGCATCTA +
Preference number: 2 (lower is better)
Translates to: EKTYQAVTLTIPSVC*SGSLRTHISNVWHL
Trigger: TAGATGCCATACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTAAGTGTGACAGCCTGATAAGTTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR TCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATATGTCGAGTTTCTGCTaGATAGACTTCCTACGTTGC +
Preference number: 2 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDMSSFC*IDFLRC
Trigger: GCAACGTAGGAAGTCTATTCAGCAGAAACTCGACAT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACAGAAAGAGATGCACCTaGACAGGAATGCACAGCAAC +
Preference number: 2 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYRKRCT*TGMHSN
Trigger: GTTGCTGTGCATTCCTGTGCAGGTGCATCTCTTTCT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATTTGCTCCTGTTCAACTaGAACTTGATGGATCCCATG +
Preference number: 2 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDLLLFN*NLMDPM
Trigger: CATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAA...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR TCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACTGTTCAACTGGAACTTaGTGGATCCCATGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYCSTGT*WIPCGF
Trigger: GAAACCACATGGGATCCATCAAGTTCCAGTTGAACA...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR TCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACCACAGCAATACACACTaGACAATGTCGAGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYHSNTH*TMSSFC
Trigger: GCAGAAACTCGACATTGTTCAGTGTGTATTGCTGTG...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATAGTTACAGAAAACACTaGCTCTGTATCCTGGGCTTT +
Preference number: 2 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDSYRKH*LCILGF
Trigger: AAAGCCCAGGATACAGAGCCAGTGTTTTCTGTAACT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACTTAGTAAGAAAGAGATaGACCTGCACAGGAATGCAC +
Preference number: 2 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYLVRKR*TCTGMH
Trigger: GTGCATTCCTGTGCAGGTGCATCTCTTTCTTACTAA...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACATAGACTTCCTACGTTaGTCTGGAATTCGAAGTTGG +
Preference number: 2 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYIDFLR*SGIRSW
Trigger: CCAACTTCGAATTCCAGAGCAACGTAGGAAGTCTAT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR TCA 72 bp CTGAGGTGGAGTCCGCCGAGCACCCTGTCGCCCCACTaGGGCTCCCTTGGGGACAGGCGGTCTAGTGCTCAT +
Preference number: 3 (lower is better)
Translates to: LRWSPPSTLSPH*GSLGDRRSSAH
Trigger: ATGAGCACTAGACCGCCTGTCCCCAAGGGAGCCTCAGTGGGGCGACAGGGTGCTCGGCGGACTCCACCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR TCA 72 bp CCTGCACAGGAATGCACAGCAACAGTGGGGAGGGCCTaGGGTGGAGTCCGCCGAGCACCCTGTCGCCCCACT +
Preference number: 3 (lower is better)
Translates to: PAQECTATVGRA*GGVRRAPCRPT
Trigger: AGTGGGGCGACAGGGTGCTCGGCGGACTCCACCTCAGGCCCTCCCCACTGTTGCTGTGCATTCCTGTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CAA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCACCCACTGAGGCTCCCTaGGGGACAGGCGGTCTAGTG +
Preference number: 3 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPPTEAP*GTGGLV
Trigger: CACTAGACCGCCTGTCCCCAAGGGAGCCTCAGTGGG...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CCA 72 bp TACTGTGCAGGCTCTGGAGATGCCCAGTCCTCTGTCTaGACCAGAGTCCACACAGAGCTGAGCTGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: YCAGSGDAQSSV*TRVHTELSWGR
Trigger: CCTGCCCCAGCTCAGCTCTGTGTGGACTCTGGTCCAGACAGAGGACTGGGCATCTCCAGAGCCTGCACAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR TCA 72 bp TGGAACTTGATGGATCCCATGTGGTTTCCCCCATCCTaGCGCTGTGGCTCAGACACTCTCCCTAAGCTGGTC +
Preference number: 3 (lower is better)
Translates to: WNLMDPMWFPPS*RCGSDTLPKLV
Trigger: GACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGGGAAACCACATGGGATCCATCAAGTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CAA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCATTCCCAAGCCAACAGTaGTGTTCTTCCAATCACATG +
Preference number: 3 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPFPSQQ*CSSNHM
Trigger: CATGTGATTGGAAGAACACAACTGTTGGCTTGGGAA...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CCA 72 bp TGTATGGCATCTACCTCTACCTGGGTCACAACCAAGTaGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAA +
Preference number: 3 (lower is better)
Translates to: CMASTSTWVTTK*VSTRSVFLDSQ
Trigger: TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGAGGTAGATGCCATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CAA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAATTTTCCTTCATGGTGTaGAGGGGAAGGAAAGATAGG +
Preference number: 3 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQFSFMV*RGRKDR
Trigger: CCTATCTTTCCTTCCCCTCAACACCATGAAGGAAAA...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CCA 72 bp GACGCATATCTCAAATGTATGGCATCTACCTCTACCTaGGTCACAACCAAGTGGGTTTCTACTAGATCGGTG +
Preference number: 3 (lower is better)
Translates to: DAYLKCMASTST*VTTKWVSTRSV
Trigger: CACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGAGGTAGATGCCATACATTTGAGATATGCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CCA 72 bp TTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTATaGCATCTACCTCTACCTGGGTCACAACCAAGTGGG +
Preference number: 3 (lower is better)
Translates to: LSGSLRTHISNV*HLPLPGSQPSG
Trigger: CCCACTTGGTTGTGACCCAGGTAGAGGTAGATGCCATACATTTGAGATATGCGTCCTTAAGGAACCTGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CAA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATATCCCTTCAGTCTGCTaGTCAGGTTCCTTAAGGACG +
Preference number: 3 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDIPSVC*SGSLRT
Trigger: CGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGAT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR TCA 72 bp TTCCTACGTTGCTCTGGAATTCGAAGTTGGCCTAACTaGGGTCTCCAGTTACAGAAAACACTGGCTCTGTAT +
Preference number: 3 (lower is better)
Translates to: FLRCSGIRSWPN*GLQLQKTLALY
Trigger: ATACAGAGCCAGTGTTTTCTGTAACTGGAGACCTCAGTTAGGCCAACTTCGAATTCCAGAGCAACGTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CCA 72 bp TCATCCTGTGTCTGCTCTGCAGCCATTTTAGTAAGCTaGGCAAGGAGGTCATTTAGAAATTGGGTTTTTCCT +
Preference number: 3 (lower is better)
Translates to: SSCVCSAAILVS*ARRSFRNWVFP
Trigger: AGGAAAAACCCAATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACAGGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CAA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATTTTTCCTTCATGGTGTaGAGGGGAAGGAAAGATAGG +
Preference number: 3 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDFSFMV*RGRKDR
Trigger: CCTATCTTTCCTTCCCCTCAACACCATGAAGGAAAA...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CAA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATTCTGTATCCTGGGCTTaGAGAAAACTTATCAGGCTG +
Preference number: 3 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDSVSWA*RKLIRL
Trigger: CAGCCTGATAAGTTTTCTCAAAGCCCAGGATACAGA...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CAA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACCTGTTCAACTGGAACTaGATGGATCCCATGTGGTTT +
Preference number: 3 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYLFNWN*MDPMWF
Trigger: AAACCACATGGGATCCATCAAGTTCCAGTTGAACAG...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR-3UTR CAA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACAATAGACTTCCTACGTaGCTCTGGAATTCGAAGTTG +
Preference number: 3 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYNRLPT*LWNSKL
Trigger: CAACTTCGAATTCCAGAGCAACGTAGGAAGTCTATT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGAGACGGAAGCGCGCCTaGCCCCTTCCGGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQRRKRA*PLPGLG
Trigger: GCCGAGGCCCGGAAGGGGCCAGGCGCGCTTCCGTCT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCCTCCTCGCCGGAACTaGGCTCGCGTCGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQPPRRN*ARVASS
Trigger: CGAGGACGCGACGCGAGCCCAGTTCCGGCGAGGAGG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGAGGGAGGCGGGGCTGTaGCACGCAGGTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQREAGL*HAGSQG
Trigger: CCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAGTGGGGAGGGCCTaGGGTGGAGTCCGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQTVGRA*GGVRRA
Trigger: TGCTCGGCGGACTCCACCTCAGGCCCTCCCCACTGT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCACTCCTCGCGCCCCTaGCCCAAGTGTGCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADHSSRP*PKCARW
Trigger: CCAGCGCGCACACTTGGGCCAGGGGCGCGAGGAGTG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418390.6
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAGGGAGGCGGGGCTGTaGCACGCAGGTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADREAGL*HAGSQG
Trigger: CCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGATCTCCTCCTCCTTCTaGAGGGCATCCCGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQISSSF*RASRGR
Trigger: GCGCCCTCGGGATGCCCTGCAGAAGGAGGAGGAGAT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGAGCTTCTCCACAACTTaGAGCGCCGACTCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQSFSTT*SADSAA
Trigger: GGCGGCGGAGTCGGCGCTCCAAGTTGTGGAGAAGCT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCCTTGCATTGTCCCCTaGGGGTGGCCTTCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQPCIVP*GWPSVL
Trigger: GAGAACCGAAGGCCACCCTCAGGGGACAATGCAAGG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTGGCGGAAGCATGGCTaGTTCCCATGGGGTACGGGG +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADWRKHG*FPWGTG
Trigger: CCCCGTACCCCATGGGAAGCAGCCATGCTTCCGCCA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGCTGCTGACCACTGGTaGCAAGTGGGCACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQAADHW*QVGTAG
Trigger: ACCAGCAGTGCCCACTTGGCACCAGTGGTCAGCAGC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCCCAGGTGTCGTTCTTaGCTGGCCCCGAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADPRCRS*LAPSLS
Trigger: GGACAGACTCGGGGCCAGCCAAGAACGACACCTGGG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGGCACTGCTGGTGCTTaGGCCATCATAGGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADGTAGA*AIIGRL
Trigger: GAGCCGGCCTATGATGGCCCAAGCACCAGCAGTGCC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCCTTGCATTGTCCCCTaGGGGTGGCCTTCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADPCIVP*GWPSVL
Trigger: GAGAACCGAAGGCCACCCTCAGGGGACAATGCAAGG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAGTGGGCACTGCTGGTaGTTGGGCCATCATAGGCCG +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADSGHCW*LGHHRP
Trigger: CGGCCTATGATGGCCCAAGCACCAGCAGTGCCCACT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCCGGACGTCACGAGGTaGCTTGGCCACAGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADPDVTR*LGHRVD
Trigger: GTCAACTCTGTGGCCAAGCCACCTCGTGACGTCCGG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCCAAGTGGGCACTGCTaGTGCTTGGGCCATCATAGG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQPSGHC*CLGHHR
Trigger: CCTATGATGGCCCAAGCACCAGCAGTGCCCACTTGG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACACCACTGGTGCCAAGTaGGCACTGCTGGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADTTGAK*ALLVLG
Trigger: CCCAAGCACCAGCAGTGCCCACTTGGCACCAGTGGT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGCCCAGTCCTCTGTCTaGACCAGAGTCCACACAGAG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQAQSSV*TRVHTE
Trigger: CTCTGTGTGGACTCTGGTCCAGACAGAGGACTGGGC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAGGAAACAGTGCTGCTaGCCACTGGTGCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADRKQCC*PLVPSG
Trigger: CCCACTTGGCACCAGTGGTCAGCAGCACTGTTTCCT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGTGCCAAGTGGGCACTaGTGGTGCTTGGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADVPSGH*WCLGHH
Trigger: ATGATGGCCCAAGCACCAGCAGTGCCCACTTGGCAC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGCAGCACCTGCAGACTaGAGGACTCGGAGACCAAAA +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQAAPAD*RTRRPK
Trigger: TTTTGGTCTCCGAGTCCTGCAGTCTGCAGGTGCTGC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCAGAATTCTAAAGTGTaGTCCAGGCAGGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQQNSKV*SRQGGG
Trigger: CCCGCCTCCCTGCCTGGAGCACACTTTAGAATTCTG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGGGCCACTAGGTCCCTaGCAAAGCTTCCAACATGCT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQGPLGP*QSFQHA
Trigger: AGCATGTTGGAAGCTTTGCCAGGGACCTAGTGGCCC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGAGGATCGGCTCCCCGTaGCTTTCCAGGTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQRIGSP*LSRFLG
Trigger: ACCAAGAAACCTGGAAAGCCACGGGGAGCCGATCCT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGAAACAATGGGCTCCTaGTCCTCCTCCAGGGATCTG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQETMGS*SSSRDL
Trigger: CAGATCCCTGGAGGAGGACCAGGAGCCCATTGTTTC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGGTGTCGTTCTTGGCTaGCCCCGAGTCTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADGVVLG*PRVCPE
Trigger: TTCAGGACAGACTCGGGGCCAGCCAAGAACGACACC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAACCCCTTTCCCATaGGGTTCACCCAGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQTTPFP*GSPRCR
Trigger: ACGACACCTGGGTGAACCCCATGGGAAAGGGGTTGT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGCAGTGGACGGTAATTaGCCTGTATCGCGGGTAACG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQAVDGN*PVSRVT
Trigger: CGTTACCCGCGATACAGGCCAATTACCGTCCACTGC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCTACTGGCGGAAGCATaGCTGCTTCCCATGGGGTAC +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADLLAEA*LLPMGY
Trigger: GTACCCCATGGGAAGCAGCCATGCTTCCGCCAGTAG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCCAAGTGGGCACTGCTaGTGCTTGGGCCATCATAGG +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADPSGHC*CLGHHR
Trigger: CCTATGATGGCCCAAGCACCAGCAGTGCCCACTTGG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAGTGCTGCTGACCACTaGTGCCAAGTGGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADSAADH*CQVGTA
Trigger: AGCAGTGCCCACTTGGCACCAGTGGTCAGCAGCACT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
3UTR CAA 72 bp GTCCGCCGAGCACCCTGTCGCCCCACTGAGGCTCCCTaGGGGACAGGCGGTCTAGTGCTCATTCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: VRRAPCRPTEAP*GTGGLVLIPCP
Trigger: AGGGCAAGGAATGAGCACTAGACCGCCTGTCCCCAAGGGAGCCTCAGTGGGGCGACAGGGTGCTCGGCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCAGAATTCTAAAGTGTaGTCCAGGCAGGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADQNSKV*SRQGGG
Trigger: CCCGCCTCCCTGCCTGGAGCACACTTTAGAATTCTG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACATTCCTTGCCCTACGTaGAGCAGGTACTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADIPCPT*SRYCAG
Trigger: GCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAAT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCCTTTCCCAGGCTTCTaGTGTGAAACAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQPFPGF*CETMGS
Trigger: GGAGCCCATTGTTTCACACCAGAAGCCTGGGAAAGG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCCTTCTCATCACTCTTaGCATCCACGGGGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQPSHHS*HPRGVC
Trigger: ACAAACGCCCCGTGGATGCCAAGAGTGATGAGAAGG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGCACCTTTCTCAGCTTaGCTAAATCAGCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQAPFSA*LNQLQP
Trigger: CGGCTGGAGCTGATTTAGCCAAGCTGAGAAAGGTGC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCTCGAGGGAAGGCAGTaGACGGTAATTGGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQLEGRQ*TVIGLY
Trigger: ATACAGGCCAATTACCGTCCACTGCCTTCCCTCGAG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGGGGCTGGTCATAGCTaGGGTAGGATTCAAAAGACA +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQGAGHS*GRIQKT
Trigger: TGTCTTTTGAATCCTACCTCAGCTATGACCAGCCCC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTCTATGCGATACAGCTaGTCAGGTGTACACCTCTCC +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQSMRYS*SGVHLS
Trigger: GGAGAGGTGTACACCTGATCAGCTGTATCGCATAGA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGCTTGGCCACAGAGTTaGCAAAGGCCATCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQAWPQS*QRPSLL
Trigger: AAGCAAAGATGGCCTTTGTCAACTCTGTGGCCAAGC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTCTTCTTCAGGCTGCTaGCCTCTCTGTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQSSSGC*PLCPSL
Trigger: AAGAGAAGGACAGAGAGGGCAGCAGCCTGAAGAAGA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGGGCAACAGGTCTCCTaGTCCTTTTCCTGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQGQQVS*SFSCVK
Trigger: TTTGACACAGGAAAAGGAGCAGGAGACCTGTTGCCC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGACAAAGGCCATCTTTaGTTGTCGGCCTTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQDKGHL*LSAFGL
Trigger: AAGCCCAAAGGCCGACAAGCAAAGATGGCCTTTGTC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGTTCCAAACTTTTCCTaGCTCCTCCGGACGTCACGA +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADVPNFS*LLRTSR
Trigger: TCGTGACGTCCGGAGGAGGCAGGAAAAGTTTGGAAC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTTTCTCAGGGACAGCTaGTCCTCCCGTTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQFLRDS*SSRSKL
Trigger: AAGTTTGGAACGGGAGGAGCAGCTGTCCCTGAGAAA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCTAGTGCTCATTCCTTaGCCTACGTGCAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADLVLIP*PTCSRY
Trigger: GTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGAGGACTGGTACAAGATaGAGGGGATTGAACATGGCC +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQRTGTR*RGLNMA
Trigger: GGCCATGTTCAATCCCCTCCATCTTGTACCAGTCCT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTCTGGTGTGAAACAATaGGCTCCTGGTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADSGVKQ*APGPPP
Trigger: TGGAGGAGGACCAGGAGCCCATTGTTTCACACCAGA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCCTTCTCTTTTACCTTaGGCAACAGGTCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQPSLLP*ATGLLL
Trigger: GAGCAGGAGACCTGTTGCCCAAGGTAAAAGAGAAGG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGAGGTCTGGCAACACTaGCAACACATCAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADEVWQH*QHIRHL
Trigger: AAGGTGCCTGATGTGTTGCCAGTGTTGCCAGACCTC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGCTTTTCGCTTTGGCTaGAAGGAGGATATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQAFRFG*KEDISS
Trigger: CGAGCTGATATCCTCCTTCCAGCCAAAGCGAAAAGC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGCTGGGGCAGGAGACTaGCTTTCACTAGGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADAGAGD*LSLGFH
Trigger: ATGAAAGCCTAGTGAAAGCCAGTCTCCTGCCCCAGC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGAGGGAGGGAGCCCAGTaGCTTTCTATCCAAATTAGT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQREGAQ*LSIQIS
Trigger: ACTAATTTGGATAGAAAGTCACTGGGCTCCCTCCCT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTCCAGCCGGCTTCTCTaGCTTGGTTTTGTTCACCTT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADSSRLL*LGFVHL
Trigger: AAGGTGAACAAAACCAAGTCAGAGAAGCCGGCTGGA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTTCTTCTTCCTGGGGTaGAGAGAACGCTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQFFFLG*RERFSL
Trigger: AAGCGAAAAGCGTTCTCTTCACCCCAGGAAGAAGAA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTACCCTGTCGCCCCACTaGGGCTCCCTTGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSTLSPH*GSLGDR
Trigger: CCTGTCCCCAAGGGAGCCTCAGTGGGGCGACAGGGT...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTGTGTGATTTCTCTCTaGTCACCACAGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQCVISL*SPQRPS
Trigger: AGAAGGCCTCTGTGGTGAGCAGAGAGAAATCACACA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTCTTCTTCAGGCTGCTaGCCTCTCTGTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADSSSGC*PLCPSL
Trigger: AAGAGAAGGACAGAGAGGGCAGCAGCCTGAAGAAGA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACACTTCTTCTTCAGGCTaGTGCCCTCTCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADTSSSG*CPLCPS
Trigger: AGAAGGACAGAGAGGGCAGCAGCCTGAAGAAGAAGT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTTCTCTGGGTCTCTGTaGTTTGGCTTTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQFSGSL*FGFFRW
Trigger: CCACCTGAAAAAGCCAAAGCACAGAGACCCAGAGAA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCGGATGCATTGCTGGTaGAAGGTCATCATTTTAGGG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQRMHCW*KVIILG
Trigger: CCCTAAAATGATGACCTTGCACCAGCAATGCATCCG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCATCCCTTCAGTCTaGTTGTCAGGTTCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQTIPSV*LSGSLR
Trigger: CCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTTCGGTTCTCCTCTTTaGAGAGGGCCTTGTGTGATT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQFGSPL*RGPCVI
Trigger: AATCACACAAGGCCCTCTCCAAAGAGGAGAACCGAA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTGGGTCTCTGTGCTTTaGCTTTTTCAGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQWVSVL*LFQVVV
Trigger: GACAACCACCTGAAAAAGCCAAAGCACAGAGACCCA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCCTTCTCTTTTACCTTaGGCAACAGGTCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADPSLLP*ATGLLL
Trigger: GAGCAGGAGACCTGTTGCCCAAGGTAAAAGAGAAGG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGGAGATAGGCACACTTaGAACCAGAATACACCTGCA +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQGDRHT*NQNTPA
Trigger: TGCAGGTGTATTCTGGTTCCAAGTGTGCCTATCTCC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGGCCTTTGGGCTTATTaGCATGTGCGAACTGGATAT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQGLWAY*HVRTGY
Trigger: ATATCCAGTTCGCACATGCCAATAAGCCCAAAGGCC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTTGCTTGTCGGCCTTTaGGCTTATTGGCATGTGCGA +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADLLVGL*AYWHVR
Trigger: TCGCACATGCCAATAAGCCCAAAGGCCGACAAGCAA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACACACTCTCCCTAAGCTaGTCCTTCCCTCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADTLSLS*SFPPNP
Trigger: AGGATTTGGAGGGAAGGACCAGCTTAGGGAGAGTGT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTTGTGCTCCTTGTTTTaGCTCACAACCCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADLCSLF*LTTPFP
Trigger: TGGGAAAGGGGTTGTGAGTCAAAACAAGGAGCACAA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTTCTTCTTCCTGGGGTaGAGAGAACGCTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADFFFLG*RERFSL
Trigger: AAGCGAAAAGCGTTCTCTTCACCCCAGGAAGAAGAA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTGCCCTCCTAAGTTCTaGTCTTGCTCCTGTTCAACT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADCPPKF*SCSCST
Trigger: AGTTGAACAGGAGCAAGATCAGAACTTAGGAGGGCA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCGAAGTTGGCCTAACTaGGGTCTCCAGTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADRSWPN*GLQLQK
Trigger: TTTCTGTAACTGGAGACCTCAGTTAGGCCAACTTCG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGCAAAGCTTCCAACATaGTCGTGTTTTCGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQAKLPT*SCFRKL
Trigger: TAGCTTGCGAAAACACGAGCATGTTGGAAGCTTTGC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGGCGCTTTCGGGAATTaGTCTTCTCAAAGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADGAFGN*SSQSPV
Trigger: AACAGGACTTTGAGAAGAGCAATTCCCGAAAGCGCC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCTGTCCTTGTATTCCTaGCTCCCCAGATTCCATTTC +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADLSLYS*LPRFHF
Trigger: GAAATGGAATCTGGGGAGGCAGGAATACAAGGACAG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACATCTGATGAGGACTaGTACAAGATGGAGGGGATT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQTSDED*YKMEGI
Trigger: AATCCCCTCCATCTTGTACCAGTCCTCATCAGATGT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTTTGGCTTTTTCAGGTaGTTGTCTGAAGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADFGFFR*LSEAAS
Trigger: AGAGGCCGCTTCAGACAACCACCTGAAAAAGCCAAA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTGGGTCTCTGTGCTTTaGCTTTTTCAGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADWVSVL*LFQVVV
Trigger: GACAACCACCTGAAAAAGCCAAAGCACAGAGACCCA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGAACGCTTTTCGCTTTaGCTGGAAGGAGGATATCAG +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADERFSL*LEGGYQ
Trigger: CTGATATCCTCCTTCCAGCCAAAGCGAAAAGCGTTC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGAATACACCTGCATCTTaGAATTCATTCTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQNTPAS*NSFCAQ
Trigger: CTGGGCGCAGAATGAATTCCAAGATGCAGGTGTATT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGGCCTTTGGGCTTATTaGCATGTGCGAACTGGATAT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADGLWAY*HVRTGY
Trigger: ATATCCAGTTCGCACATGCCAATAAGCCCAAAGGCC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGTTGGTGACATTCTGTaGCACCTCTTTCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADVGDIL*HLFLSS
Trigger: AGATGAGAGAAAGAGGTGTCACAGAATGTCACCAAC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGCAAAGCTTCCAACATaGTCGTGTTTTCGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADAKLPT*SCFRKL
Trigger: TAGCTTGCGAAAACACGAGCATGTTGGAAGCTTTGC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTGTCCAGACCTTGCTTaGTTTTGTCCAATTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQCPDLA*FCPIWL
Trigger: AAGCCAAATTGGACAAAAGCAAGCAAGGTCTGGACA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGAAAGACATGGTTGGCTaGTCGAATTCATCCTCCATA +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQKDMVG*SNSSSI
Trigger: TATGGAGGATGAATTCGAGCAGCCAACCATGTCTTT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAGTACTCGGATGCATTaGTGGTGCAAGGTCATCATT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADSTRMH*WCKVII
Trigger: AATGATGACCTTGCACCAGCAATGCATCCGAGTACT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTTGGCGGAAGCATGGCTaGTTCCCATGGGGTACGGGG +
Preference number: 4 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSWRKHG*FPWGTG
Trigger: CCCCGTACCCCATGGGAAGCAGCCATGCTTCCGCCA...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACATCCTGTGTCTGCTCTaGAGCCATTTTAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADILCLL*SHFSKL
Trigger: CAGCTTACTAAAATGGCTGCAGAGCAGACACAGGAT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACACATCTGATGAGGACTaGTACAAGATGGAGGGGATT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADTSDED*YKMEGI
Trigger: AATCCCCTCCATCTTGTACCAGTCCTCATCAGATGT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTTCAAAAGACATGGTTaGCTGCTCGAATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQFKRHG*LLEFIL
Trigger: GAGGATGAATTCGAGCAGCCAACCATGTCTTTTGAA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTCGGATGCATTGCTaGTGCAAGGTCATCATTTTA +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQTRMHC*CKVIIL
Trigger: TAAAATGATGACCTTGCACCAGCAATGCATCCGAGT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTTCAAGAACAGAGTATaGGACTCCTCCCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQFKNRV*DSSHFK
Trigger: TTTGAAGTGGGAGGAGTCCCATACTCTGTTCTTGAA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTGTCTTGGCCATCATTaGGGCAATTTTCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQCLGHH*GNFLHS
Trigger: ACTGTGAAGAAAATTGCCCCAATGATGGCCAAGACA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGAGTTACAGAAAACACTaGCTCTGTATCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQSYRKH*LCILGF
Trigger: AAAGCCCAGGATACAGAGCCAGTGTTTTCTGTAACT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGCCATTTTAGTAAGCTaGGCAAGGAGGTCATTTAGA +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQAILVS*ARRSFR
Trigger: TCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTCCAAGTGCCGTGGCTaGAGTTTTCACAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADSKCRG*SFHNLF
Trigger: AAAAAGATTGTGAAAACTTCAGCCACGGCACTTGGA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTGTCCAGACCTTGCTTaGTTTTGTCCAATTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADCPDLA*FCPIWL
Trigger: AAGCCAAATTGGACAAAAGCAAGCAAGGTCTGGACA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGGGCTTATTGGCATGTaGGAACTGGATATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADGLIGM*ELDILC
Trigger: ACAAAGAATATCCAGTTCGCACATGCCAATAAGCCC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTAGTGGGCACTGCTGGTaGTTGGGCCATCATAGGCCG +
Preference number: 4 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSSGHCW*LGHHRP
Trigger: CGGCCTATGATGGCCCAAGCACCAGCAGTGCCCACT...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCATGCAGGCTCTGGAGATaGCCAGTCCTCTGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPCRLWR*PVLCLD
Trigger: GTCCAGACAGAGGACTGGGCATCTCCAGAGCCTGCA...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCAGACGGAAGCGCGCCTaGCCCCTTCCGGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSRRKRA*PLPGLG
Trigger: GCCGAGGCCCGGAAGGGGCCAGGCGCGCTTCCGTCT...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTGCTTTTGTCCAATTTaGCTTTCTCTGGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADCFCPI*LSLGLC
Trigger: ACAGAGACCCAGAGAAAGCCAAATTGGACAAAAGCA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACACTCGGATGCATTGCTaGTGCAAGGTCATCATTTTA +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADTRMHC*CKVIIL
Trigger: TAAAATGATGACCTTGCACCAGCAATGCATCCGAGT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCACTACTGGCGGAAGCATaGCTGCTTCCCATGGGGTAC +
Preference number: 4 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPLLAEA*LLPMGY
Trigger: GTACCCCATGGGAAGCAGCCATGCTTCCGCCAGTAG...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTGTCTTGGCCATCATTaGGGCAATTTTCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADCLGHH*GNFLHS
Trigger: ACTGTGAAGAAAATTGCCCCAATGATGGCCAAGACA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAGCCCAGTCCTCTGTCTaGACCAGAGTCCACACAGAG +
Preference number: 4 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPAQSSV*TRVHTE
Trigger: CTCTGTGTGGACTCTGGTCCAGACAGAGGACTGGGC...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCTTGGGTAATTTCTaGACTGAGTCCAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQTLGNF*TESKFL
Trigger: TAAAAACTTGGACTCAGTTCAGAAATTACCCAAGGT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR GCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTGTGCCAAGTGGGCACTaGTGGTGCTTGGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSVPSGH*WCLGHH
Trigger: ATGATGGCCCAAGCACCAGCAGTGCCCACTTGGCAC...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAACCCAAGTGTGCGCGCTaGGGGCTGGGGGCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEPKCAR*GLGAAR
Trigger: CCGAGCAGCCCCCAGCCCCCAGCGCGCACACTTGGG...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418390.6
CDS-3UTR CCA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAAGGATCGGCTCCCCGTaGCTTTCCAGGTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPRIGSP*LSRFLG
Trigger: ACCAAGAAACCTGGAAAGCCACGGGGAGCCGATCCT...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTGGTGTCGTTCTTGGCTaGCCCCGAGTCTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSGVVLG*PRVCPE
Trigger: TTCAGGACAGACTCGGGGCCAGCCAAGAACGACACC...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAGCAGTGGACGGTAATTaGCCTGTATCGCGGGTAACG +
Preference number: 4 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPAVDGN*PVSRVT
Trigger: CGTTACCCGCGATACAGGCCAATTACCGTCCACTGC...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACACCTTGGGTAATTTCTaGACTGAGTCCAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADTLGNF*TESKFL
Trigger: TAAAAACTTGGACTCAGTTCAGAAATTACCCAAGGT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR TCA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAGACTCGCAAAAAGGATaGGGGAAAGGCTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPDSQKG*GKGSRP
Trigger: AGGTCTGGAGCCTTTCCCTCATCCTTTTTGCGAGTC...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAGTTCCAAACTTTTCCTaGCTCCTCCGGACGTCACGA +
Preference number: 4 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPVPNFS*LLRTSR
Trigger: TCGTGACGTCCGGAGGAGGCAGGAAAAGTTTGGAAC...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTTGGCATGTGCGAACTaGATATTCTTTGTTAGTACT +
Preference number: 4 (lower is better)
Translates to: RQGGGAVARRFPGAAPADLACAN*IFFVST
Trigger: AGTACTAACAAAGAATATCCAGTTCGCACATGCCAA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCAGGGAGGCGGGGCTGTaGCACGCAGGTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSREAGL*HAGSQG
Trigger: CCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCT...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTTCCAGCCGGCTTCTCTaGCTTGGTTTTGTTCACCTT +
Preference number: 4 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSSSRLL*LGFVHL
Trigger: AAGGTGAACAAAACCAAGTCAGAGAAGCCGGCTGGA...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCACCCTGTCGCCCCACTaGGGCTCCCTTGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSTLSPH*GSLGDR
Trigger: CCTGTCCCCAAGGGAGCCTCAGTGGGGCGACAGGGT...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCTGGTTTCCCCCATCCTaGCGCTGTGGCTCAGACACT +
Preference number: 4 (lower is better)
Translates to: GFLLDRCSLTANKGADTAWFPPS*RCGSDT
Trigger: AGTGTCTGAGCCACAGCGTCAGGATGGGGGAAACCA...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTACCAAGTCACATCCCTaGTGTAGATACTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSTKSHP*CRYSWG
Trigger: CCCCCAAGAGTATCTACATCAGGGATGTGACTTGGT...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCATCTCCTCCTCCTTCTaGAGGGCATCCCGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSISSSF*RASRGR
Trigger: GCGCCCTCGGGATGCCCTGCAGAAGGAGGAGGAGAT...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCACGGATGCATTGCTGGTaGAAGGTCATCATTTTAGGG +
Preference number: 4 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPRMHCW*KVIILG
Trigger: CCCTAAAATGATGACCTTGCACCAGCAATGCATCCG...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCCCAGGTGTCGTTCTTaGCTGGCCCCGAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSPRCRS*LAPSLS
Trigger: GGACAGACTCGGGGCCAGCCAAGAACGACACCTGGG...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAGAACGCTTTTCGCTTTaGCTGGAAGGAGGATATCAG +
Preference number: 4 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPERFSL*LEGGYQ
Trigger: CTGATATCCTCCTTCCAGCCAAAGCGAAAAGCGTTC...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGAACAGTGGGGAGGGCCTaGGGTGGAGTCCGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRTVGRA*GGVRRA
Trigger: TGCTCGGCGGACTCCACCTCAGGCCCTCCCCACTGT...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATCACCCCCGCTCCCTGTaGTCGCGTGCTGAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNHPRSL*SRAEPK
Trigger: CTTGGGCTCAGCACGCGAGCACAGGGAGCGGGGGTG...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418390.6
CDS-3UTR GCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAATGGCGGAAGCATGGCTaGTTCCCATGGGGTACGGGG +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEWRKHG*FPWGTG
Trigger: CCCCGTACCCCATGGGAAGCAGCCATGCTTCCGCCA...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCGCTGCTGACCACTGGTaGCAAGTGGGCACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSAADHW*QVGTAG
Trigger: ACCAGCAGTGCCCACTTGGCACCAGTGGTCAGCAGC...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCACAACCCCTTTCCCATaGGGTTCACCCAGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: GFLLDRCSLTANKGADTATTPFP*GSPRCR
Trigger: ACGACACCTGGGTGAACCCCATGGGAAAGGGGTTGT...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCGCAGTGGACGGTAATTaGCCTGTATCGCGGGTAACG +
Preference number: 4 (lower is better)
Translates to: GFLLDRCSLTANKGADTAAVDGN*PVSRVT
Trigger: CGTTACCCGCGATACAGGCCAATTACCGTCCACTGC...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAGGCACTGCTGGTGCTTaGGCCATCATAGGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEGTAGA*AIIGRL
Trigger: GAGCCGGCCTATGATGGCCCAAGCACCAGCAGTGCC...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAGCCCCGAGTCTGTCCTaGAAGGCATTGCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEAPSLS*KALLWP
Trigger: AGGCCACAGCAATGCCTTTCAGGACAGACTCGGGGC...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTAGTACTCGGATGCATTaGTGGTGCAAGGTCATCATT +
Preference number: 4 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSSTRMH*WCKVII
Trigger: AATGATGACCTTGCACCAGCAATGCATCCGAGTACT...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTAATACACCTGCATCTTaGAATTCATTCTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSNTPAS*NSFCAQ
Trigger: CTGGGCGCAGAATGAATTCCAAGATGCAGGTGTATT...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCATTCAAGAACAGAGTATaGGACTCCTCCCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPFKNRV*DSSHFK
Trigger: TTTGAAGTGGGAGGAGTCCCATACTCTGTTCTTGAA...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAAGTGCTGCTGACCACTaGTGCCAAGTGGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQSAADH*CQVGTA
Trigger: AGCAGTGCCCACTTGGCACCAGTGGTCAGCAGCACT...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATCCTGTGCTCGCGTGCTaGGCCCAAGCCTGGAAGACC +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDPVLAC*AQAWKT
Trigger: GGTCTTCCAGGCTTGGGCTCAGCACGCGAGCACAGG...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418390.6
CDS-3UTR TCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCGGGGCTGGTCATAGCTaGGGTAGGATTCAAAAGACA +
Preference number: 4 (lower is better)
Translates to: GFLLDRCSLTANKGADTAGAGHS*GRIQKT
Trigger: TGTCTTTTGAATCCTACCTCAGCTATGACCAGCCCC...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTTCCAAGTGCCGTGGCTaGAGTTTTCACAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSSKCRG*SFHNLF
Trigger: AAAAAGATTGTGAAAACTTCAGCCACGGCACTTGGA...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCTTTTCCTCTTTCCCCTaGCTCTTCGCACCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: GFLLDRCSLTANKGADTAFSSFP*LFAPSH
Trigger: GTGACTTGGTGCGAAGAGTCAGGGGAAAGAGGAAAA...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAGAATTCTAAAGTGTaGTCCAGGCAGGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSQNSKV*SRQGGG
Trigger: CCCGCCTCCCTGCCTGGAGCACACTTTAGAATTCTG...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTTTAGTAAGAAAGAGATaGACCTGCACAGGAATGCAC +
Preference number: 4 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSLVRKR*TCTGMH
Trigger: GTGCATTCCTGTGCAGGTGCATCTCTTTCTTACTAA...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCAGCAGGATGACACCTTaGTCCTTTCCCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSSRMTP*SFPSRF
Trigger: GAAGCGGGAGGGAAAGGAGCAAGGTGTCATCCTGCT...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCGGGCCACTAGGTCCCTaGCAAAGCTTCCAACATGCT +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSGPLGP*QSFQHA
Trigger: AGCATGTTGGAAGCTTTGCCAGGGACCTAGTGGCCC...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAGGGCCACTAGGTCCCTaGCAAAGCTTCCAACATGCT +
Preference number: 4 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQGPLGP*QSFQHA
Trigger: AGCATGTTGGAAGCTTTGCCAGGGACCTAGTGGCCC...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATCCCAGGTGTCGTTCTTaGCTGGCCCCGAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNPRCRS*LAPSLS
Trigger: GGACAGACTCGGGGCCAGCCAAGAACGACACCTGGG...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTTGCTTTTGTCCAATTTaGCTTTCTCTGGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSCFCPI*LSLGLC
Trigger: ACAGAGACCCAGAGAAAGCCAAATTGGACAAAAGCA...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCCCGGACGTCACGAGGTaGCTTGGCCACAGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSPDVTR*LGHRVD
Trigger: GTCAACTCTGTGGCCAAGCCACCTCGTGACGTCCGG...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATCCTTGCATTGTCCCCTaGGGGTGGCCTTCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNPCIVP*GWPSVL
Trigger: GAGAACCGAAGGCCACCCTCAGGGGACAATGCAAGG...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATGCTGCTGACCACTGGTaGCAAGTGGGCACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNAADHW*QVGTAG
Trigger: ACCAGCAGTGCCCACTTGGCACCAGTGGTCAGCAGC...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATAGCTTCTCCACAACTTaGAGCGCCGACTCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDSFSTT*SADSAA
Trigger: GGCGGCGGAGTCGGCGCTCCAAGTTGTGGAGAAGCT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAGAAACAATGGGCTCCTaGTCCTCCTCCAGGGATCTG +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEETMGS*SSSRDL
Trigger: CAGATCCCTGGAGGAGGACCAGGAGCCCATTGTTTC...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCGGTGTCGTTCTTGGCTaGCCCCGAGTCTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSGVVLG*PRVCPE
Trigger: TTCAGGACAGACTCGGGGCCAGCCAAGAACGACACC...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCGCACCTTTCTCAGCTTaGCTAAATCAGCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSAPFSA*LNQLQP
Trigger: CGGCTGGAGCTGATTTAGCCAAGCTGAGAAAGGTGC...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCGAGGTCTGGCAACACTaGCAACACATCAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSEVWQH*QHIRHL
Trigger: AAGGTGCCTGATGTGTTGCCAGTGTTGCCAGACCTC...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGAACCACTGGTGCCAAGTaGGCACTGCTGGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRTTGAK*ALLVLG
Trigger: CCCAAGCACCAGCAGTGCCCACTTGGCACCAGTGGT...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCATGTCGAGTTTCTGCTaGATAGACTTCCTACGTTGC +
Preference number: 4 (lower is better)
Translates to: GFLLDRCSLTANKGADTAMSSFC*IDFLRC
Trigger: GCAACGTAGGAAGTCTATTCAGCAGAAACTCGACAT...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACATCTCCTCCTCCTTCTaGAGGGCATCCCGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYISSSF*RASRGR
Trigger: GCGCCCTCGGGATGCCCTGCAGAAGGAGGAGGAGAT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCGGGCAACAGGTCTCCTaGTCCTTTTCCTGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSGQQVS*SFSCVK
Trigger: TTTGACACAGGAAAAGGAGCAGGAGACCTGTTGCCC...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCTTTCTCAGGGACAGCTaGTCCTCCCGTTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSFLRDS*SSRSKL
Trigger: AAGTTTGGAACGGGAGGAGCAGCTGTCCCTGAGAAA...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATAGTGGGCACTGCTGGTaGTTGGGCCATCATAGGCCG +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDSGHCW*LGHHRP
Trigger: CGGCCTATGATGGCCCAAGCACCAGCAGTGCCCACT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATTGCAGGCTCTGGAGATaGCCAGTCCTCTGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNCRLWR*PVLCLD
Trigger: GTCCAGACAGAGGACTGGGCATCTCCAGAGCCTGCA...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCATCCTGTGTCTGCTCTaGAGCCATTTTAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: GFLLDRCSLTANKGADTAILCLL*SHFSKL
Trigger: CAGCTTACTAAAATGGCTGCAGAGCAGACACAGGAT...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACAGCTTCTCCACAACTTaGAGCGCCGACTCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYSFSTT*SADSAA
Trigger: GGCGGCGGAGTCGGCGCTCCAAGTTGTGGAGAAGCT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAACCTTTCCCAGGCTTCTaGTGTGAAACAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEPFPGF*CETMGS
Trigger: GGAGCCCATTGTTTCACACCAGAAGCCTGGGAAAGG...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCACAACCCCTTTCCCATaGGGTTCACCCAGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSTTPFP*GSPRCR
Trigger: ACGACACCTGGGTGAACCCCATGGGAAAGGGGTTGT...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAGCTTTTCGCTTTGGCTaGAAGGAGGATATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQAFRFG*KEDISS
Trigger: CGAGCTGATATCCTCCTTCCAGCCAAAGCGAAAAGC...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATCCGGACGTCACGAGGTaGCTTGGCCACAGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDPDVTR*LGHRVD
Trigger: GTCAACTCTGTGGCCAAGCCACCTCGTGACGTCCGG...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACGGCACTGCTGGTGCTTaGGCCATCATAGGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYGTAGA*AIIGRL
Trigger: GAGCCGGCCTATGATGGCCCAAGCACCAGCAGTGCC...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGACCAAGTGGGCACTGCTaGTGCTTGGGCCATCATAGG +
Preference number: 4 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRPSGHC*CLGHHR
Trigger: CCTATGATGGCCCAAGCACCAGCAGTGCCCACTTGG...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATAATGCACAGCAACAGTaGGGAGGGCCTGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNNAQQQ*GGPEVE
Trigger: CTCCACCTCAGGCCCTCCCCACTGTTGCTGTGCATT...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAGCTTGGCCACAGAGTTaGCAAAGGCCATCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEAWPQS*QRPSLL
Trigger: AAGCAAAGATGGCCTTTGTCAACTCTGTGGCCAAGC...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATTGGTTTCCCCCATCCTaGCGCTGTGGCTCAGACACT +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDWFPPS*RCGSDT
Trigger: AGTGTCTGAGCCACAGCGTCAGGATGGGGGAAACCA...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGAAGCCAACAAGGGAGCTaGCACTGCCCTCCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRSQQGS*HCPPKF
Trigger: GAACTTAGGAGGGCAGTGTCAGCTCCCTTGTTGGCT...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTAGCCAACAAGGGAGCTaGCACTGCCCTCCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCSQQGS*HCPPKF
Trigger: GAACTTAGGAGGGCAGTGTCAGCTCCCTTGTTGGCT...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCGAAGTTGGCCTAACTaGGGTCTCCAGTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSRSWPN*GLQLQK
Trigger: TTTCTGTAACTGGAGACCTCAGTTAGGCCAACTTCG...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCGGGCTTATTGGCATGTaGGAACTGGATATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: GFLLDRCSLTANKGADTAGLIGM*ELDILC
Trigger: ACAAAGAATATCCAGTTCGCACATGCCAATAAGCCC...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAGACAAAGGCCATCTTTaGTTGTCGGCCTTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEDKGHL*LSAFGL
Trigger: AAGCCCAAAGGCCGACAAGCAAAGATGGCCTTTGTC...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCAGGTGGGGAGTTCTGTaGAAATCAATCTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSRWGVL*KSISQG
Trigger: ACCTTGGGAGATTGATTTGCACAGAACTCCCCACCT...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTAGCAGGATGACACCTTaGTCCTTTCCCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCSRMTP*SFPSRF
Trigger: GAAGCGGGAGGGAAAGGAGCAAGGTGTCATCCTGCT...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCCCTTTCCCAGGCTTCTaGTGTGAAACAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSPFPGF*CETMGS
Trigger: GGAGCCCATTGTTTCACACCAGAAGCCTGGGAAAGG...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCCCTTCTCATCACTCTTaGCATCCACGGGGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSPSHHS*HPRGVC
Trigger: ACAAACGCCCCGTGGATGCCAAGAGTGATGAGAAGG...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAATTTGGCTTTTTCAGGTaGTTGTCTGAAGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQFGFFR*LSEAAS
Trigger: AGAGGCCGCTTCAGACAACCACCTGAAAAAGCCAAA...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCTGCTTTTGTCCAATTTaGCTTTCTCTGGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GFLLDRCSLTANKGADTACFCPI*LSLGLC
Trigger: ACAGAGACCCAGAGAAAGCCAAATTGGACAAAAGCA...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCGAGGTCTGGCAACACTaGCAACACATCAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSEVWQH*QHIRHL
Trigger: AAGGTGCCTGATGTGTTGCCAGTGTTGCCAGACCTC...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGAGTACTGTGCAGGCTCTaGAGATGCCCAGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRVLCRL*RCPVLC
Trigger: ACAGAGGACTGGGCATCTCCAGAGCCTGCACAGTAC...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTGTACTGTGCAGGCTCTaGAGATGCCCAGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCVLCRL*RCPVLC
Trigger: ACAGAGGACTGGGCATCTCCAGAGCCTGCACAGTAC...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAGCATCTACCTCTACCTaGGTCACAACCAAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEASTST*VTTKWV
Trigger: AACCCACTTGGTTGTGACCCAGGTAGAGGTAGATGC...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAGTTGGTGACATTCTGTaGCACCTCTTTCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQVGDIL*HLFLSS
Trigger: AGATGAGAGAAAGAGGTGTCACAGAATGTCACCAAC...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAATTGTGCTCCTTGTTTTaGCTCACAACCCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVELCSLF*LTTPFP
Trigger: TGGGAAAGGGGTTGTGAGTCAAAACAAGGAGCACAA...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCTCCAGCCGGCTTCTCTaGCTTGGTTTTGTTCACCTT +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSSSRLL*LGFVHL
Trigger: AAGGTGAACAAAACCAAGTCAGAGAAGCCGGCTGGA...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCTCTATGCGATACAGCTaGTCAGGTGTACACCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSSMRYS*SGVHLS
Trigger: GGAGAGGTGTACACCTGATCAGCTGTATCGCATAGA...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTGACTCGCAAAAAGGATaGGGGAAAGGCTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCDSQKG*GKGSRP
Trigger: AGGTCTGGAGCCTTTCCCTCATCCTTTTTGCGAGTC...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAATTTCCTTCATGGTGTTaGGGGGAAGGAAAGATAGGG +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEFPSWC*GEGKIG
Trigger: CCCTATCTTTCCTTCCCCTCAACACCATGAAGGAAA...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCTGTTCAACTGGAACTTaGTGGATCCCATGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSCSTGT*WIPCGF
Trigger: GAAACCACATGGGATCCATCAAGTTCCAGTTGAACA...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCTGTATCCTGGGCTTTaGGAAAACTTATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSLYPGL*ENLSGC
Trigger: ACAGCCTGATAAGTTTTCTCAAAGCCCAGGATACAG...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCTTTTCCTCTTTCCCCTaGCTCTTCGCACCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSFSSFP*LFAPSH
Trigger: GTGACTTGGTGCGAAGAGTCAGGGGAAAGAGGAAAA...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCGCAAAGCTTCCAACATaGTCGTGTTTTCGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSAKLPT*SCFRKL
Trigger: TAGCTTGCGAAAACACGAGCATGTTGGAAGCTTTGC...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCGGGCAACAGGTCTCCTaGTCCTTTTCCTGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSGQQVS*SFSCVK
Trigger: TTTGACACAGGAAAAGGAGCAGGAGACCTGTTGCCC...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCTTTCTCAGGGACAGCTaGTCCTCCCGTTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSFLRDS*SSRSKL
Trigger: AAGTTTGGAACGGGAGGAGCAGCTGTCCCTGAGAAA...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACGTGCCAAGTGGGCACTaGTGGTGCTTGGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYVPSGH*WCLGHH
Trigger: ATGATGGCCCAAGCACCAGCAGTGCCCACTTGGCAC...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAACTGTCCTTGTATTCCTaGCTCCCCAGATTCCATTTC +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVELSLYS*LPRFHF
Trigger: GAAATGGAATCTGGGGAGGCAGGAATACAAGGACAG...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATGCAGCACCTGCAGACTaGAGGACTCGGAGACCAAAA +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDAAPAD*RTRRPK
Trigger: TTTTGGTCTCCGAGTCCTGCAGTCTGCAGGTGCTGC...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAAAGCCCCAAAGAAACTaGTCAGTACACCAAGGATCA +
Preference number: 4 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQKPQRN*SVHQGS
Trigger: TGATCCTTGGTGTACTGAGCAGTTTCTTTGGGGCTT...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGATCTGGTGTGAAACAATaGGCTCCTGGTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRSGVKQ*APGPPP
Trigger: TGGAGGAGGACCAGGAGCCCATTGTTTCACACCAGA...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATTCTGGTGTGAAACAATaGGCTCCTGGTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNSGVKQ*APGPPP
Trigger: TGGAGGAGGACCAGGAGCCCATTGTTTCACACCAGA...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTCTCGAGGGAAGGCAGTaGACGGTAATTGGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCLEGRQ*TVIGLY
Trigger: ATACAGGCCAATTACCGTCCACTGCCTTCCCTCGAG...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCGCTTTTCGCTTTGGCTaGAAGGAGGATATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSAFRFG*KEDISS
Trigger: CGAGCTGATATCCTCCTTCCAGCCAAAGCGAAAAGC...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAGAACGCTTTTCGCTTTaGCTGGAAGGAGGATATCAG +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEERFSL*LEGGYQ
Trigger: CTGATATCCTCCTTCCAGCCAAAGCGAAAAGCGTTC...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACAATGCACAGCAACAGTaGGGAGGGCCTGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYNAQQQ*GGPEVE
Trigger: CTCCACCTCAGGCCCTCCCCACTGTTGCTGTGCATT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAACACAGCAATACACACTaGACAATGTCGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEHSNTH*TMSSFC
Trigger: GCAGAAACTCGACATTGTTCAGTGTGTATTGCTGTG...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTACCAAGTCACATCCCTaGTGTAGATACTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCTKSHP*CRYSWG
Trigger: CCCCCAAGAGTATCTACATCAGGGATGTGACTTGGT...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCTGTGTGATTTCTCTCTaGTCACCACAGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSCVISL*SPQRPS
Trigger: AGAAGGCCTCTGTGGTGAGCAGAGAGAAATCACACA...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCTTCTCTGGGTCTCTGTaGTTTGGCTTTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSFSGSL*FGFFRW
Trigger: CCACCTGAAAAAGCCAAAGCACAGAGACCCAGAGAA...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTGACAAAGGCCATCTTTaGTTGTCGGCCTTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCDKGHL*LSAFGL
Trigger: AAGCCCAAAGGCCGACAAGCAAAGATGGCCTTTGTC...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACATTCCTTGCCCTACGTaGAGCAGGTACTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYIPCPT*SRYCAG
Trigger: GCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAAT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACAGGATCGGCTCCCCGTaGCTTTCCAGGTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYRIGSP*LSRFLG
Trigger: ACCAAGAAACCTGGAAAGCCACGGGGAGCCGATCCT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGAAGGACTGGTACAAGATaGAGGGGATTGAACATGGCC +
Preference number: 4 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRRTGTR*RGLNMA
Trigger: GGCCATGTTCAATCCCCTCCATCTTGTACCAGTCCT...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATCCTTCTCATCACTCTTaGCATCCACGGGGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDPSHHS*HPRGVC
Trigger: ACAAACGCCCCGTGGATGCCAAGAGTGATGAGAAGG...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATCTCGAGGGAAGGCAGTaGACGGTAATTGGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDLEGRQ*TVIGLY
Trigger: ATACAGGCCAATTACCGTCCACTGCCTTCCCTCGAG...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCGGAGATAGGCACACTTaGAACCAGAATACACCTGCA +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSGDRHT*NQNTPA
Trigger: TGCAGGTGTATTCTGGTTCCAAGTGTGCCTATCTCC...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCACTCGGATGCATTGCTaGTGCAAGGTCATCATTTTA +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSTRMHC*CKVIIL
Trigger: TAAAATGATGACCTTGCACCAGCAATGCATCCGAGT...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATTTGCTTGTCGGCCTTTaGGCTTATTGGCATGTGCGA +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNLLVGL*AYWHVR
Trigger: TCGCACATGCCAATAAGCCCAAAGGCCGACAAGCAA...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATGGAGGGGAAAACATCTaGCTCTATGCAAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNGGENI*LYANRA
Trigger: AGCCCTGTTTGCATAGAGCCAGATGTTTTCCCCTCC...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTGGAGGGGAAAACATCTaGCTCTATGCAAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCGGENI*LYANRA
Trigger: AGCCCTGTTTGCATAGAGCCAGATGTTTTCCCCTCC...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGATTGTGCTCCTTGTTTTaGCTCACAACCCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRLCSLF*LTTPFP
Trigger: TGGGAAAGGGGTTGTGAGTCAAAACAAGGAGCACAA...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTAGGGAGGGAGCCCAGTaGCTTTCTATCCAAATTAGT +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCREGAQ*LSIQIS
Trigger: ACTAATTTGGATAGAAAGTCACTGGGCTCCCTCCCT...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATTTTCCTTCATGGTGTTaGGGGGAAGGAAAGATAGGG +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNFPSWC*GEGKIG
Trigger: CCCTATCTTTCCTTCCCCTCAACACCATGAAGGAAA...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCCTGTATCCTGGGCTTTaGGAAAACTTATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSLYPGL*ENLSGC
Trigger: ACAGCCTGATAAGTTTTCTCAAAGCCCAGGATACAG...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATCAGACATCTGGCACCTaGCCCAAATGTTCATTTGGT +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNQTSGT*PKCSFG
Trigger: ACCAAATGAACATTTGGGTCAGGTGCCAGATGTCTG...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATACTTCTTCTTCAGGCTaGTGCCCTCTCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDTSSSG*CPLCPS
Trigger: AGAAGGACAGAGAGGGCAGCAGCCTGAAGAAGAAGT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATCGGATGCATTGCTGGTaGAAGGTCATCATTTTAGGG +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNRMHCW*KVIILG
Trigger: CCCTAAAATGATGACCTTGCACCAGCAATGCATCCG...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACCTAGTGCTCATTCCTTaGCCTACGTGCAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYLVLIP*PTCSRY
Trigger: GTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAG...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTAGGTGGGGAGTTCTGTaGAAATCAATCTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCRWGVL*KSISQG
Trigger: ACCTTGGGAGATTGATTTGCACAGAACTCCCCACCT...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGAGGCTACAAAAAGCCCTaGCGTGTGTGTTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRGYKKP*RVCFSF
Trigger: GAAGGAAAAACACACACGGCAGGGCTTTTTGTAGCC...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAAAACATCTGGCTCTATaGAAACAGGGCTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQKHLAL*KQGSSK
Trigger: TTTTGATGAGCCCTGTTTGCATAGAGCCAGATGTTT...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGATTCGGTTCTCCTCTTTaGAGAGGGCCTTGTGTGATT +
Preference number: 4 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRFGSPL*RGPCVI
Trigger: AATCACACAAGGCCCTCTCCAAAGAGGAGAACCGAA...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATCCTTCTCTTTTACCTTaGGCAACAGGTCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDPSLLP*ATGLLL
Trigger: GAGCAGGAGACCTGTTGCCCAAGGTAAAAGAGAAGG...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATGGAGATAGGCACACTTaGAACCAGAATACACCTGCA +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNGDRHT*NQNTPA
Trigger: TGCAGGTGTATTCTGGTTCCAAGTGTGCCTATCTCC...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATGGCCTTTGGGCTTATTaGCATGTGCGAACTGGATAT +
Preference number: 4 (lower is better)
Translates to: CVCSAAILVSWARRSFRNGLWAY*HVRTGY
Trigger: ATATCCAGTTCGCACATGCCAATAAGCCCAAAGGCC...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATGCATCTACCTCTACCTaGGTCACAACCAAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDASTST*VTTKWV
Trigger: AACCCACTTGGTTGTGACCCAGGTAGAGGTAGATGC...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CAA 72 bp ATTTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTaGTGGGGCAGGCTAGGGATAGGGGTGGAATGGTGG +
Preference number: 4 (lower is better)
Translates to: IWFQLRGFLILD*WGRLGIGVEWW
Trigger: CCACCATTCCACCCCTATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATAGGGAGGGAGCCCAGTaGCTTTCTATCCAAATTAGT +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDREGAQ*LSIQIS
Trigger: ACTAATTTGGATAGAAAGTCACTGGGCTCCCTCCCT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACTCTATGCGATACAGCTaGTCAGGTGTACACCTCTCC +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYSMRYS*SGVHLS
Trigger: GGAGAGGTGTACACCTGATCAGCTGTATCGCATAGA...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTTGTTCAACTGGAACTTaGTGGATCCCATGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCCSTGT*WIPCGF
Trigger: GAAACCACATGGGATCCATCAAGTTCCAGTTGAACA...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAATGCCAAAATGGATACTaGCATTGCTATGAACAAATC +
Preference number: 4 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQCQNGY*HCYEQI
Trigger: GATTTGTTCATAGCAATGTCAGTATCCATTTTGGCA...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACACTTCTTCTTCAGGCTaGTGCCCTCTCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYTSSSG*CPLCPS
Trigger: AGAAGGACAGAGAGGGCAGCAGCCTGAAGAAGAAGT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCTGTCCAGACCTTGCTTaGTTTTGTCCAATTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSCPDLA*FCPIWL
Trigger: AAGCCAAATTGGACAAAAGCAAGCAAGGTCTGGACA...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCAAAGACATGGTTGGCTaGTCGAATTCATCCTCCATA +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSKDMVG*SNSSSI
Trigger: TATGGAGGATGAATTCGAGCAGCCAACCATGTCTTT...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCGGGCTTATTGGCATGTaGGAACTGGATATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSGLIGM*ELDILC
Trigger: ACAAAGAATATCCAGTTCGCACATGCCAATAAGCCC...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATAGAAAGAGATGCACCTaGACAGGAATGCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDRKRCT*TGMHSN
Trigger: GTTGCTGTGCATTCCTGTGCAGGTGCATCTCTTTCT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATTTTGGCTTTTTCAGGTaGTTGTCTGAAGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDFGFFR*LSEAAS
Trigger: AGAGGCCGCTTCAGACAACCACCTGAAAAAGCCAAA...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATTGGGTCTCTGTGCTTTaGCTTTTTCAGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDWVSVL*LFQVVV
Trigger: GACAACCACCTGAAAAAGCCAAAGCACAGAGACCCA...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTAATACACCTGCATCTTaGAATTCATTCTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCNTPAS*NSFCAQ
Trigger: CTGGGCGCAGAATGAATTCCAAGATGCAGGTGTATT...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCTTGGCATGTGCGAACTaGATATTCTTTGTTAGTACT +
Preference number: 4 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSLACAN*IFFVST
Trigger: AGTACTAACAAAGAATATCCAGTTCGCACATGCCAA...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCTGTCTTGGCCATCATTaGGGCAATTTTCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSCLGHH*GNFLHS
Trigger: ACTGTGAAGAAAATTGCCCCAATGATGGCCAAGACA...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACACACTCTCCCTAAGCTaGTCCTTCCCTCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYTLSLS*SFPPNP
Trigger: AGGATTTGGAGGGAAGGACCAGCTTAGGGAGAGTGT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTTTGCTCCTGTTCAACTaGAACTTGATGGATCCCATG +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCLLLFN*NLMDPM
Trigger: CATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAA...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CAA 72 bp TATCAGGCTGTCACACTTACCATCCCTTCAGTCTGCTaGTCAGGTTCCTTAAGGACGCATATCTCAAATGTA +
Preference number: 4 (lower is better)
Translates to: YQAVTLTIPSVC*SGSLRTHISNV
Trigger: TACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTAAGTGTGACAGCCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACTGCCCTCCTAAGTTCTaGTCTTGCTCCTGTTCAACT +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYCPPKF*SCSCST
Trigger: AGTTGAACAGGAGCAAGATCAGAACTTAGGAGGGCA...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATCACAGCAATACACACTaGACAATGTCGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDHSNTH*TMSSFC
Trigger: GCAGAAACTCGACATTGTTCAGTGTGTATTGCTGTG...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACCAGACATCTGGCACCTaGCCCAAATGTTCATTTGGT +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYQTSGT*PKCSFG
Trigger: ACCAAATGAACATTTGGGTCAGGTGCCAGATGTCTG...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAATGCCAAAATGGATACTaGCATTGCTATGAACAAATC +
Preference number: 4 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVECQNGY*HCYEQI
Trigger: GATTTGTTCATAGCAATGTCAGTATCCATTTTGGCA...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACTGTGTGATTTCTCTCTaGTCACCACAGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYCVISL*SPQRPS
Trigger: AGAAGGCCTCTGTGGTGAGCAGAGAGAAATCACACA...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACTTCTCTGGGTCTCTGTaGTTTGGCTTTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYFSGSL*FGFFRW
Trigger: CCACCTGAAAAAGCCAAAGCACAGAGACCCAGAGAA...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTAAAGACATGGTTGGCTaGTCGAATTCATCCTCCATA +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCKDMVG*SNSSSI
Trigger: TATGGAGGATGAATTCGAGCAGCCAACCATGTCTTT...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATAGTACTCGGATGCATTaGTGGTGCAAGGTCATCATT +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDSTRMH*WCKVII
Trigger: AATGATGACCTTGCACCAGCAATGCATCCGAGTACT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACCTGTCCTTGTATTCCTaGCTCCCCAGATTCCATTTC +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYLSLYS*LPRFHF
Trigger: GAAATGGAATCTGGGGAGGCAGGAATACAAGGACAG...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACACCATCCCTTCAGTCTaGTTGTCAGGTTCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYTIPSV*LSGSLR
Trigger: CCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGAATAGACTTCCTACGTTaGTCTGGAATTCGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRIDFLR*SGIRSW
Trigger: CCAACTTCGAATTCCAGAGCAACGTAGGAAGTCTAT...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCAATTCATCCTGTGTCTaGTCTGCAGCCATTTTAGTA +
Preference number: 4 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSNSSCV*SAAILV
Trigger: TACTAAAATGGCTGCAGAGCAGACACAGGATGAATT...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACTTCGGTTCTCCTCTTTaGAGAGGGCCTTGTGTGATT +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYFGSPL*RGPCVI
Trigger: AATCACACAAGGCCCTCTCCAAAGAGGAGAACCGAA...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTTTCAAAAGACATGGTTaGCTGCTCGAATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCFKRHG*LLEFIL
Trigger: GAGGATGAATTCGAGCAGCCAACCATGTCTTTTGAA...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACTGGGTCACAACCAAGTaGGTTTCTACTAGATCGGTG +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYWVTTK*VSTRSV
Trigger: CACCGATCTAGTAGAAACCCACTTGGTTGTGACCCA...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTGCCATTTTAGTAAGCTaGGCAAGGAGGTCATTTAGA +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCAILVS*ARRSFR
Trigger: TCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGC...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
3UTR CAA 72 bp CACTTCAGCAGCAAAGTCCTCTTCCCAAGCCAACAGTaGTGTTCTTCCAATCACATGATCTTACCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: HFSSKVLFPSQQ*CSSNHMILPFQ
Trigger: TTGAAAAGGTAAGATCATGTGATTGGAAGAACACAACTGTTGGCTTGGGAAGAGGACTTTGCTGCTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR TCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACGTTGGTGACATTCTGTaGCACCTCTTTCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYVGDIL*HLFLSS
Trigger: AGATGAGAGAAAGAGGTGTCACAGAATGTCACCAAC...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATTTAGTAAGAAAGAGATaGACCTGCACAGGAATGCAC +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDLVRKR*TCTGMH
Trigger: GTGCATTCCTGTGCAGGTGCATCTCTTTCTTACTAA...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATATAGACTTCCTACGTTaGTCTGGAATTCGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDIDFLR*SGIRSW
Trigger: CCAACTTCGAATTCCAGAGCAACGTAGGAAGTCTAT...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR GCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACAAGCCCCAAAGAAACTaGTCAGTACACCAAGGATCA +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYKPQRN*SVHQGS
Trigger: TGATCCTTGGTGTACTGAGCAGTTTCTTTGGGGCTT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACACATCTGATGAGGACTaGTACAAGATGGAGGGGATT +
Preference number: 4 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYTSDED*YKMEGI
Trigger: AATCCCCTCCATCTTGTACCAGTCCTCATCAGATGT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATTTCAAAAGACATGGTTaGCTGCTCGAATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDFKRHG*LLEFIL
Trigger: GAGGATGAATTCGAGCAGCCAACCATGTCTTTTGAA...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CCA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTTTGGCATGTGCGAACTaGATATTCTTTGTTAGTACT +
Preference number: 4 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCLACAN*IFFVST
Trigger: AGTACTAACAAAGAATATCCAGTTCGCACATGCCAA...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS GCA 90 bp GAACTGGGCTCGCGTCGCGTCCTCGGGCCGCAGCTCCGCCCTCCGTaGATCCCCGGCGGAGACGGAAGCGCGCCTGGCCCCTTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: ELGSRRVLGPQLRPP*IPGGDGSAPGPFRA
Trigger: GGCCCGGAAGGGGCCAGGCGCGCTTCCGTCTCCGCCGGGGATGCACGGAGGGCGGAGCTGCGGCCCGAGGACGCGACGCGAGCCCAGTTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS GCA 90 bp TGCTCGGGCCGTACGCGCCTCCGCCGCCGGCACCCCCGCTCCCTGTaGTCGCGTGCTGAGCCCAAGCCTGGAAGACCTCTCCAGGGTCTA +
Preference number: 5 (lower is better)
Translates to: CSGRTRLRRRHPRSL*SRAEPKPGRPLQGL
Trigger: TAGACCCTGGAGAGGTCTTCCAGGCTTGGGCTCAGCACGCGAGCACAGGGAGCGGGGGTGCCGGCGGCGGAGGCGCGTACGGCCCGAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418390.6
CDS CCA 90 bp CTTCTCCACAACTTGGAGCGCCGACTCCGCCGCCATCGCTGTCACTaGCGCGGCCTCCTCGCCGGAACTGGGCTCGCGTCGCGTCCTCGG +
Preference number: 5 (lower is better)
Translates to: LLHNLERRLRRHRCH*RGLLAGTGLASRPR
Trigger: CCGAGGACGCGACGCGAGCCCAGTTCCGGCGAGGAGGCCGCGCCAGTGACAGCGATGGCGGCGGAGTCGGCGCTCCAAGTTGTGGAGAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCAGCTTCTCCACAACTaGGAGCGCCGACTCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQQLLHN*ERRLRR
Trigger: GCGGCGGAGTCGGCGCTCCAAGTTGTGGAGAAGCTG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGGGCACTGCTGGTGCTaGGGCCATCATAGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADGHCWC*GHHRPA
Trigger: AGCCGGCCTATGATGGCCCAAGCACCAGCAGTGCCC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS TCA 90 bp TACGCGCCTCCGCCGCCGGCACCCCCGCTCCCTGTGCTCGCGTGCTaGGCCCAAGCCTGGAAGACCTCTCCAGGGTCTACTTCAAGACGG +
Preference number: 5 (lower is better)
Translates to: YAPPPPAPPLPVLAC*AQAWKTSPGSTSRR
Trigger: CCGTCTTGAAGTAGACCCTGGAGAGGTCTTCCAGGCTTGGGCTCAGCACGCGAGCACAGGGAGCGGGGGTGCCGGCGGCGGAGGCGCGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418390.6
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACACCCAGGTGTCGTTCTaGGCTGGCCCCGAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADTQVSF*AGPESV
Trigger: GACAGACTCGGGGCCAGCCAAGAACGACACCTGGGT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGGTTTCTCCCTTGCATaGTCCCCTGAGGGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQGFSLA*SPEGGL
Trigger: AAGGCCACCCTCAGGGGACAATGCAAGGGAGAAACC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAGGGCGGTTTCTCCCTaGCATTGTCCCCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADRAVSP*HCPLRV
Trigger: CACCCTCAGGGGACAATGCAAGGGAGAAACCGCCCT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGAGCAGGATGACACCTaGCTCCTTTCCCTCCCGCTT +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQEQDDT*LLSLPL
Trigger: AAGCGGGAGGGAAAGGAGCAAGGTGTCATCCTGCTC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGGCTTTCCAGGTTTCTaGGTAGTCCCCCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQGFPGF*VVPLHL
Trigger: GAGATGGAGGGGGACTACCAAGAAACCTGGAAAGCC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGCCTTCTCATCACTCTaGGCATCCACGGGGCGTTTG +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADAFSSL*ASTGRL
Trigger: CAAACGCCCCGTGGATGCCAAGAGTGATGAGAAGGC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGGGCGCTTTCGGGAATaGCTCTTCTCAAAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQGRFRE*LFSKSC
Trigger: ACAGGACTTTGAGAAGAGCAATTCCCGAAAGCGCCC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGGCTTTCCAGGTTTCTaGGTAGTCCCCCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADGFPGF*VVPLHL
Trigger: GAGATGGAGGGGGACTACCAAGAAACCTGGAAAGCC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACACGGGGCGTTTGTCCTaGTGGGAAGATTTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADTGRLS*WEDLCS
Trigger: GGAGCACAAATCTTCCCACAAGGACAAACGCCCCGT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGCATCCACGGGGCGTTaGTCCTTGTGGGAAGATTTG +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADASTGR*SLWEDL
Trigger: CAAATCTTCCCACAAGGACAAACGCCCCGTGGATGC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCTTCGGTTCTCCTCTTaGGAGAGGGCCTTGTGTGAT +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQLRFSS*ERALCD
Trigger: ATCACACAAGGCCCTCTCCAAAGAGGAGAACCGAAG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGGCTTTTTCAGGTGGTaGTCTGAAGCGGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADGFFRW*SEAASE
Trigger: CTCAGAGGCCGCTTCAGACAACCACCTGAAAAAGCC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCCCTTCTCTTTTACCTaGGGCAACAGGTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQPFSFT*GNRSPA
Trigger: AGCAGGAGACCTGTTGCCCAAGGTAAAAGAGAAGGG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGGCACCTTTCTCAGCTaGGCTAAATCAGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADGTFLS*AKSAPA
Trigger: GGCTGGAGCTGATTTAGCCAAGCTGAGAAAGGTGCC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCGGCCTTTGGGCTTATaGGCATGTGCGAACTGGATA +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQRPLGL*ACANWI
Trigger: TATCCAGTTCGCACATGCCAATAAGCCCAAAGGCCG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACACGTCACGAGGTGGCTaGGCCACAGAGTTGACAAAG +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADTSRGG*ATELTK
Trigger: CTTTGTCAACTCTGTGGCCAAGCCACCTCGTGACGT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGGGGCTGGCTTGATCTaGATTTTCTCAGGGACAGCT +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQGAGLI*IFSGTA
Trigger: AGCTGTCCCTGAGAAAATCAAGATCAAGCCAGCCCC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGGGTACGGGGCTGGCTaGATCTTGATTTTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADGYGAG*ILIFSG
Trigger: CCCTGAGAAAATCAAGATCAAGCCAGCCCCGTACCC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCTGGGTCTCTGTGCTTaGGCTTTTTCAGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQLGLCA*AFSGGC
Trigger: ACAACCACCTGAAAAAGCCAAAGCACAGAGACCCAG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCCCTTCTCTTTTACCTaGGGCAACAGGTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADPFSFT*GNRSPA
Trigger: AGCAGGAGACCTGTTGCCCAAGGTAAAAGAGAAGGG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTTTGCTTGTCGGCCTTaGGGCTTATTGGCATGTGCG +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADFACRP*GLLACA
Trigger: CGCACATGCCAATAAGCCCAAAGGCCGACAAGCAAA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTTTGTGCTCCTTGTTTaGACTCACAACCCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQFVLLV*THNPFP
Trigger: GGGAAAGGGGTTGTGAGTCAAAACAAGGAGCACAAA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGAGAACGCTTTTCGCTTaGGCTGGAAGGAGGATATCA +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQRTLFA*AGRRIS
Trigger: TGATATCCTCCTTCCAGCCAAAGCGAAAAGCGTTCT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGGAATACACCTGCATCTaGGAATTCATTCTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQEYTCI*EFILRP
Trigger: TGGGCGCAGAATGAATTCCAAGATGCAGGTGTATTC...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGAAGTACTCGGATGCATaGCTGGTGCAAGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQKYSDA*LVQGHH
Trigger: ATGATGACCTTGCACCAGCAATGCATCCGAGTACTT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACGGTCTGAAGAGTAAGTaGGTGACATTCTGTGACACC +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADGLKSK*VTFCDT
Trigger: GGTGTCACAGAATGTCACCAACTTACTCTTCAGACC...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAAGATGGAGGGGATaGAACATGGCCATAATCAGA +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQTRWRG*NMAIIR
Trigger: TCTGATTATGGCCATGTTCAATCCCCTCCATCTTGT...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACTTTGTGCTCCTTGTTTaGACTCACAACCCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADFVLLV*THNPFP
Trigger: GGGAAAGGGGTTGTGAGTCAAAACAAGGAGCACAAA...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTTGCTTTTGTCCAATTaGGCTTTCTCTGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQLLLSN*AFSGSL
Trigger: CAGAGACCCAGAGAAAGCCAAATTGGACAAAAGCAA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACCTGTCCAGACCTTGCTaGCTTTTGTCCAATTTGGCT +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADLSRPC*LLSNLA
Trigger: AGCCAAATTGGACAAAAGCAAGCAAGGTCTGGACAG...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAGAACGCTTTTCGCTTaGGCTGGAAGGAGGATATCA +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADRTLFA*AGRRIS
Trigger: TGATATCCTCCTTCCAGCCAAAGCGAAAAGCGTTCT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCGAACTGGATATTCTTaGTTAGTACTCGTAGCCGCT +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQRTGYS*LVLVAA
Trigger: AGCGGCTACGAGTACTAACAAAGAATATCCAGTTCG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAAAGGCCATCTTTGCTaGTCGGCCTTTGGGCTTATT +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADKGHLC*SAFGLI
Trigger: AATAAGCCCAAAGGCCGACAAGCAAAGATGGCCTTT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGTTGTCTTGGCCATCATaGGGGCAATTTTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQLSWPS*GQFSSQ
Trigger: CTGTGAAGAAAATTGCCCCAATGATGGCCAAGACAA...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCAGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGCTGTTCAACTGGAACTaGATGGATCCCATGTGGTTT +
Preference number: 5 (lower is better)
Translates to: PGREAGLWHAGSQGQHLQLFNWN*MDPMWF
Trigger: AAACCACATGGGATCCATCAAGTTCCAGTTGAACAG...CTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAAGGGCGGTTTCTCCCTaGCATTGTCCCCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPRAVSP*HCPLRV
Trigger: CACCCTCAGGGGACAATGCAAGGGAGAAACCGCCCT...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS CCA 90 bp AACAGTGCTGCTGACCACTGGTGCCAAGTGGGCACTGCTGGTGCTTaGGCCATCATAGGCCGGCTCCTCAGGGCTGGGGTTAAAGCTGAT +
Preference number: 5 (lower is better)
Translates to: NSAADHWCQVGTAGA*AIIGRLLRAGVKAD
Trigger: ATCAGCTTTAACCCCAGCCCTGAGGAGCCGGCCTATGATGGCCCAAGCACCAGCAGTGCCCACTTGGCACCAGTGGTCAGCAGCACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAGGTTTCTCCCTTGCATaGTCCCCTGAGGGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPGFSLA*SPEGGL
Trigger: AAGGCCACCCTCAGGGGACAATGCAAGGGAGAAACC...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTAGGGCGGTTTCTCCCTaGCATTGTCCCCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSRAVSP*HCPLRV
Trigger: CACCCTCAGGGGACAATGCAAGGGAGAAACCGCCCT...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAAAGCTGTCCAGACCTaGCTTGCTTTTGTCCAATTT +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADKAVQT*LAFVQF
Trigger: AAATTGGACAAAAGCAAGCAAGGTCTGGACAGCTTT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp AGGCAGGGAGGCGGGGCTGTGGCACGCAGGTTCCCAGGGGCAGCACCTGCAGACAAAGCTTTAATTGTCTaGGCCATCATTGGGGCAATT +
Preference number: 5 (lower is better)
Translates to: RQGGGAVARRFPGAAPADKALIV*AIIGAI
Trigger: AATTGCCCCAATGATGGCCAAGACAATTAAAGCTTT...GTCTGCAGGTGCTGCCCCTGGGAACCTGCGTGCCACAGCCCCGCCTCCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CCA 90 bp GCTGGAAGGAGGATATCAGCTCGAGGGAAGGCAGTGGACGGTAATTaGCCTGTATCGCGGGTAACGGGAGGTCTGGCAACACTGGCAACA +
Preference number: 5 (lower is better)
Translates to: AGRRISARGKAVDGN*PVSRVTGGLATLAT
Trigger: TGTTGCCAGTGTTGCCAGACCTCCCGTTACCCGCGATACAGGCCAATTACCGTCCACTGCCTTCCCTCGAGCTGATATCCTCCTTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTGGCTTTCCAGGTTTCTaGGTAGTCCCCCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSGFPGF*VVPLHL
Trigger: GAGATGGAGGGGGACTACCAAGAAACCTGGAAAGCC...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTACGGGGCGTTTGTCCTaGTGGGAAGATTTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSTGRLS*WEDLCS
Trigger: GGAGCACAAATCTTCCCACAAGGACAAACGCCCCGT...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTGGCACCTTTCTCAGCTaGGCTAAATCAGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSGTFLS*AKSAPA
Trigger: GGCTGGAGCTGATTTAGCCAAGCTGAGAAAGGTGCC...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTACGTCACGAGGTGGCTaGGCCACAGAGTTGACAAAG +
Preference number: 5 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSTSRGG*ATELTK
Trigger: CTTTGTCAACTCTGTGGCCAAGCCACCTCGTGACGT...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCACTGGGTCTCTGTGCTTaGGCTTTTTCAGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPLGLCA*AFSGGC
Trigger: ACAACCACCTGAAAAAGCCAAAGCACAGAGACCCAG...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCCCACTGAGGCTCCCTaGGGGACAGGCGGTCTAGTG +
Preference number: 5 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSPTEAP*GTGGLV
Trigger: CACTAGACCGCCTGTCCCCAAGGGAGCCTCAGTGGG...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS CCA 90 bp TATGTTTCTTCTGCCTGTGGTCAGGGCTATAGGATCGGCTCCCCGTaGCTTTCCAGGTTTCTTGGTAGTCCCCCTCCATCTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: YVSSACGQGYRIGSP*LSRFLGSPPPSPPP
Trigger: AGGAGGAGGAGATGGAGGGGGACTACCAAGAAACCTGGAAAGCCACGGGGAGCCGATCCTATAGCCCTGACCACAGGCAGAAGAAACATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCGCCTTCTCATCACTCTaGGCATCCACGGGGCGTTTG +
Preference number: 5 (lower is better)
Translates to: GFLLDRCSLTANKGADTAAFSSL*ASTGRL
Trigger: CAAACGCCCCGTGGATGCCAAGAGTGATGAGAAGGC...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAGAATACACCTGCATCTaGGAATTCATTCTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPEYTCI*EFILRP
Trigger: TGGGCGCAGAATGAATTCCAAGATGCAGGTGTATTC...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTGGTCTGAAGAGTAAGTaGGTGACATTCTGTGACACC +
Preference number: 5 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSGLKSK*VTFCDT
Trigger: GGTGTCACAGAATGTCACCAACTTACTCTTCAGACC...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCACGGGGCGTTTGTCCTaGTGGGAAGATTTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: GFLLDRCSLTANKGADTATGRLS*WEDLCS
Trigger: GGAGCACAAATCTTCCCACAAGGACAAACGCCCCGT...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCACTGTTCAACTGGAACTaGATGGATCCCATGTGGTTT +
Preference number: 5 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPLFNWN*MDPMWF
Trigger: AAACCACATGGGATCCATCAAGTTCCAGTTGAACAG...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGACAGCTTCTCCACAACTaGGAGCGCCGACTCCGCCGC +
Preference number: 5 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRQLLHN*ERRLRR
Trigger: GCGGCGGAGTCGGCGCTCCAAGTTGTGGAGAAGCTG...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCCTTCGGTTCTCCTCTTaGGAGAGGGCCTTGTGTGAT +
Preference number: 5 (lower is better)
Translates to: GFLLDRCSLTANKGADTALRFSS*ERALCD
Trigger: ATCACACAAGGCCCTCTCCAAAGAGGAGAACCGAAG...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAGGTTTCTCCCTTGCATaGTCCCCTGAGGGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQGFSLA*SPEGGL
Trigger: AAGGCCACCCTCAGGGGACAATGCAAGGGAGAAACC...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAAAAGCTGTCCAGACCTaGCTTGCTTTTGTCCAATTT +
Preference number: 5 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPKAVQT*LAFVQF
Trigger: AAATTGGACAAAAGCAAGCAAGGTCTGGACAGCTTT...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCGGGGCTGGCTTGATCTaGATTTTCTCAGGGACAGCT +
Preference number: 5 (lower is better)
Translates to: GFLLDRCSLTANKGADTAGAGLI*IFSGTA
Trigger: AGCTGTCCCTGAGAAAATCAAGATCAAGCCAGCCCC...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATGGGCACTGCTGGTGCTaGGGCCATCATAGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: CVCSAAILVSWARRSFRNGHCWC*GHHRPA
Trigger: AGCCGGCCTATGATGGCCCAAGCACCAGCAGTGCCC...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTGGGCACTGCTGGTGCTaGGGCCATCATAGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCGHCWC*GHHRPA
Trigger: AGCCGGCCTATGATGGCCCAAGCACCAGCAGTGCCC...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGCGGTCTAGTGCTCATTCCTTGCCCTACGTGCAGCAGGTACTGTGCAGGCTCTTTGTCTTGGCCATCATaGGGGCAATTTTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: GGLVLIPCPTCSRYCAGSLSWPS*GQFSSQ
Trigger: CTGTGAAGAAAATTGCCCCAATGATGGCCAAGACAA...AGAGCCTGCACAGTACCTGCTGCACGTAGGGCAAGGAATGAGCACTAGACCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAGAGCAGGATGACACCTaGCTCCTTTCCCTCCCGCTT +
Preference number: 5 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQEQDDT*LLSLPL
Trigger: AAGCGGGAGGGAAAGGAGCAAGGTGTCATCCTGCTC...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS CCA 90 bp TGTGTGATTTCTCTCTGCTCACCACAGAGGCCTTCTCATCACTCTTaGCATCCACGGGGCGTTTGTCCTTGTGGGAAGATTTGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: CVISLCSPQRPSHHS*HPRGVCPCGKICAP
Trigger: AGGAGCACAAATCTTCCCACAAGGACAAACGCCCCGTGGATGCCAAGAGTGATGAGAAGGCCTCTGTGGTGAGCAGAGAGAAATCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGAACCCAGGTGTCGTTCTaGGCTGGCCCCGAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRTQVSF*AGPESV
Trigger: GACAGACTCGGGGCCAGCCAAGAACGACACCTGGGT...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCGGGTACGGGGCTGGCTaGATCTTGATTTTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSGYGAG*ILIFSG
Trigger: CCCTGAGAAAATCAAGATCAAGCCAGCCCCGTACCC...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CCCCATCCTGACGCTGTGGCTCAGACACTCTCCCTAAGCTGGTCCTTCCCTCCAAAAGCTTTAATTGTCTaGGCCATCATTGGGGCAATT +
Preference number: 5 (lower is better)
Translates to: PHPDAVAQTLSLSWSFPPKALIV*AIIGAI
Trigger: AATTGCCCCAATGATGGCCAAGACAATTAAAGCTTT...TGGAGGGAAGGACCAGCTTAGGGAGAGTGTCTGAGCCACAGCGTCAGGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCATCCCTTCAGTCTGCTaGTCAGGTTCCTTAAGGACG +
Preference number: 5 (lower is better)
Translates to: GFLLDRCSLTANKGADTAIPSVC*SGSLRT
Trigger: CGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGAT...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACCAGCTTCTCCACAACTaGGAGCGCCGACTCCGCCGC +
Preference number: 5 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYQLLHN*ERRLRR
Trigger: GCGGCGGAGTCGGCGCTCCAAGTTGTGGAGAAGCTG...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACTTCGGTTCTCCTCTTaGGAGAGGGCCTTGTGTGAT +
Preference number: 5 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQLRFSS*ERALCD
Trigger: ATCACACAAGGCCCTCTCCAAAGAGGAGAACCGAAG...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAACGTCACGAGGTGGCTaGGCCACAGAGTTGACAAAG +
Preference number: 5 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVETSRGG*ATELTK
Trigger: CTTTGTCAACTCTGTGGCCAAGCCACCTCGTGACGT...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACCCCACTGAGGCTCCCTaGGGGACAGGCGGTCTAGTG +
Preference number: 5 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYPTEAP*GTGGLV
Trigger: CACTAGACCGCCTGTCCCCAAGGGAGCCTCAGTGGG...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACTAGATCGGTGTTCCTaGACAGCCAACAAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQLDRCS*TANKGA
Trigger: AGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAG...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS GCA 90 bp AGACCTTGCTTGCTTTTGTCCAATTTGGCTTTCTCTGGGTCTCTGTaGTTTGGCTTTTTCAGGTGGTTGTCTGAAGCGGCCTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: RPCLLLSNLAFSGSL*FGFFRWLSEAASEG
Trigger: TCCCTCAGAGGCCGCTTCAGACAACCACCTGAAAAAGCCAAAGCACAGAGACCCAGAGAAAGCCAAATTGGACAAAAGCAAGCAAGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS GCA 90 bp GGTCTCCTGCTCCTTTTCCTGTGTCAAAGCTGTCCAGACCTTGCTTaGTTTTGTCCAATTTGGCTTTCTCTGGGTCTCTGTGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: GLLLLFLCQSCPDLA*FCPIWLSLGLCALA
Trigger: AGCCAAAGCACAGAGACCCAGAGAAAGCCAAATTGGACAAAAGCAAGCAAGGTCTGGACAGCTTTGACACAGGAAAAGGAGCAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CCA 90 bp TCCAATTTGGCTTTCTCTGGGTCTCTGTGCTTTGGCTTTTTCAGGTaGTTGTCTGAAGCGGCCTCTGAGGGAGGCAAACACTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SNLAFSGSLCFGFFR*LSEAASEGGKHFFF
Trigger: GAAGAAGAAGTGTTTGCCTCCCTCAGAGGCCGCTTCAGACAACCACCTGAAAAAGCCAAAGCACAGAGACCCAGAGAAAGCCAAATTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACACCCAGGTGTCGTTCTaGGCTGGCCCCGAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYTQVSF*AGPESV
Trigger: GACAGACTCGGGGCCAGCCAAGAACGACACCTGGGT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTGCCTTCTCATCACTCTaGGCATCCACGGGGCGTTTG +
Preference number: 5 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCAFSSL*ASTGRL
Trigger: CAAACGCCCCGTGGATGCCAAGAGTGATGAGAAGGC...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAACGGCCTTTGGGCTTATaGGCATGTGCGAACTGGATA +
Preference number: 5 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVERPLGL*ACANWI
Trigger: TATCCAGTTCGCACATGCCAATAAGCCCAAAGGCCG...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAACAAGGGAGCTGACACTGCCTTCCCAAGCCAACAGTaGTGTTCTTCCAATCACATG +
Preference number: 5 (lower is better)
Translates to: GFLLDRCSLTANKGADTAFPSQQ*CSSNHM
Trigger: CATGTGATTGGAAGAACACAACTGTTGGCTTGGGAA...GGCAGTGTCAGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAGTAGAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTGCATCCACGGGGCGTTaGTCCTTGTGGGAAGATTTG +
Preference number: 5 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCASTGR*SLWEDL
Trigger: CAAATCTTCCCACAAGGACAAACGCCCCGTGGATGC...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATGGCTTTTTCAGGTGGTaGTCTGAAGCGGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: CVCSAAILVSWARRSFRNGFFRW*SEAASE
Trigger: CTCAGAGGCCGCTTCAGACAACCACCTGAAAAAGCC...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCTTTGCTTGTCGGCCTTaGGGCTTATTGGCATGTGCG +
Preference number: 5 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSFACRP*GLLACA
Trigger: CGCACATGCCAATAAGCCCAAAGGCCGACAAGCAAA...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTGGGTACGGGGCTGGCTaGATCTTGATTTTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCGYGAG*ILIFSG
Trigger: CCCTGAGAAAATCAAGATCAAGCCAGCCCCGTACCC...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAACAAGATGGAGGGGATaGAACATGGCCATAATCAGA +
Preference number: 5 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQTRWRG*NMAIIR
Trigger: TCTGATTATGGCCATGTTCAATCCCCTCCATCTTGT...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAATTGCTTTTGTCCAATTaGGCTTTCTCTGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQLLLSN*AFSGSL
Trigger: CAGAGACCCAGAGAAAGCCAAATTGGACAAAAGCAA...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGACCCTTCTCTTTTACCTaGGGCAACAGGTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRPFSFT*GNRSPA
Trigger: AGCAGGAGACCTGTTGCCCAAGGTAAAAGAGAAGGG...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAAAGTACTCGGATGCATaGCTGGTGCAAGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEKYSDA*LVQGHH
Trigger: ATGATGACCTTGCACCAGCAATGCATCCGAGTACTT...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGACGGCCTTTGGGCTTATaGGCATGTGCGAACTGGATA +
Preference number: 5 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRRPLGL*ACANWI
Trigger: TATCCAGTTCGCACATGCCAATAAGCCCAAAGGCCG...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGAGGGGCTGGCTTGATCTaGATTTTCTCAGGGACAGCT +
Preference number: 5 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRGAGLI*IFSGTA
Trigger: AGCTGTCCCTGAGAAAATCAAGATCAAGCCAGCCCC...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCTTCCCAAGCCAACAGTaGTGTTCTTCCAATCACATG +
Preference number: 5 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSFPSQQ*CSSNHM
Trigger: CATGTGATTGGAAGAACACAACTGTTGGCTTGGGAA...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS CCA 90 bp TTCCTGTGTCAAAGCTGTCCAGACCTTGCTTGCTTTTGTCCAATTTaGCTTTCTCTGGGTCTCTGTGCTTTGGCTTTTTCAGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: FLCQSCPDLACFCPI*LSLGLCALAFSGGC
Trigger: ACAACCACCTGAAAAAGCCAAAGCACAGAGACCCAGAGAAAGCCAAATTGGACAAAAGCAAGCAAGGTCTGGACAGCTTTGACACAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS-3UTR CAA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAAACAAGATGGAGGGGATaGAACATGGCCATAATCAGA +
Preference number: 5 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVETRWRG*NMAIIR
Trigger: TCTGATTATGGCCATGTTCAATCCCCTCCATCTTGT...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACGCATCCACGGGGCGTTaGTCCTTGTGGGAAGATTTG +
Preference number: 5 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYASTGR*SLWEDL
Trigger: CAAATCTTCCCACAAGGACAAACGCCCCGTGGATGC...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TCTACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCAAAGCTGTCCAGACCTaGCTTGCTTTTGTCCAATTT +
Preference number: 5 (lower is better)
Translates to: STWVTTKWVSTRSVFLDSKAVQT*LAFVQF
Trigger: AAATTGGACAAAAGCAAGCAAGGTCTGGACAGCTTT...GCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCAGAACGCTTTTCGCTTaGGCTGGAAGGAGGATATCA +
Preference number: 5 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSRTLFA*AGRRIS
Trigger: TGATATCCTCCTTCCAGCCAAAGCGAAAAGCGTTCT...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCAAGTACTCGGATGCATaGCTGGTGCAAGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSKYSDA*LVQGHH
Trigger: ATGATGACCTTGCACCAGCAATGCATCCGAGTACTT...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATTTTGCTTGTCGGCCTTaGGGCTTATTGGCATGTGCG +
Preference number: 5 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDFACRP*GLLACA
Trigger: CGCACATGCCAATAAGCCCAAAGGCCGACAAGCAAA...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp ACCTGGGTCACAACCAAGTGGGTTTCTACTAGATCGGTGTTCCTTGACAGCCAAAATAGACTTCCTACGTaGCTCTGGAATTCGAAGTTG +
Preference number: 5 (lower is better)
Translates to: TWVTTKWVSTRSVFLDSQNRLPT*LWNSKL
Trigger: CAACTTCGAATTCCAGAGCAACGTAGGAAGTCTATT...TTGGCTGTCAAGGAACACCGATCTAGTAGAAACCCACTTGGTTGTGACCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACGGGCGCTTTCGGGAATaGCTCTTCTCAAAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYGRFRE*LFSKSC
Trigger: ACAGGACTTTGAGAAGAGCAATTCCCGAAAGCGCCC...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATGGTCTGAAGAGTAAGTaGGTGACATTCTGTGACACC +
Preference number: 5 (lower is better)
Translates to: CVCSAAILVSWARRSFRNGLKSK*VTFCDT
Trigger: GGTGTCACAGAATGTCACCAACTTACTCTTCAGACC...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATGAATACACCTGCATCTaGGAATTCATTCTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: CVCSAAILVSWARRSFRNEYTCI*EFILRP
Trigger: TGGGCGCAGAATGAATTCCAAGATGCAGGTGTATTC...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp AGTTCTGATCTTGCTCCTGTTCAACTGGAACTTGATGGATCCCATGTGGTTTCCCGAACTGGATATTCTTaGTTAGTACTCGTAGCCGCT +
Preference number: 5 (lower is better)
Translates to: SSDLAPVQLELDGSHVVSRTGYS*LVLVAA
Trigger: AGCGGCTACGAGTACTAACAAAGAATATCCAGTTCG...GGAAACCACATGGGATCCATCAAGTTCCAGTTGAACAGGAGCAAGATCAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATAAAGGCCATCTTTGCTaGTCGGCCTTTGGGCTTATT +
Preference number: 5 (lower is better)
Translates to: CVCSAAILVSWARRSFRNKGHLC*SAFGLI
Trigger: AATAAGCCCAAAGGCCGACAAGCAAAGATGGCCTTT...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACCTAGATCGGTGTTCCTaGACAGCCAACAAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYLDRCS*TANKGA
Trigger: AGCTCCCTTGTTGGCTGTCAAGGAACACCGATCTAG...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CCTAAGCTGGTCCTTCCCTCCAAATCCTGCCTTAAACACACTCAGAAGGTAGAATTCCTAATATTAGATTaGTGGGGCAGGCTAGGGATA +
Preference number: 5 (lower is better)
Translates to: PKLVLPSKSCLKHTQKVEFLILD*WGRLGI
Trigger: TATCCCTAGCCTGCCCCACAAATCTAATATTAGGAA...TTCTACCTTCTGAGTGTGTTTAAGGCAGGATTTGGAGGGAAGGACCAGCTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACCTGGGTCTCTGTGCTTaGGCTTTTTCAGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYLGLCA*AFSGGC
Trigger: ACAACCACCTGAAAAAGCCAAAGCACAGAGACCCAG...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATCTGTCCAGACCTTGCTaGCTTTTGTCCAATTTGGCT +
Preference number: 5 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDLSRPC*LLSNLA
Trigger: AGCCAAATTGGACAAAAGCAAGCAAGGTCTGGACAG...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp GGAAAGGCTCCAGACCTACAGAGCACCTCCCTTAATAAATACCAGTTAGTAAGACGAACTGGATATTCTTaGTTAGTACTCGTAGCCGCT +
Preference number: 5 (lower is better)
Translates to: GKAPDLQSTSLNKYQLVRRTGYS*LVLVAA
Trigger: AGCGGCTACGAGTACTAACAAAGAATATCCAGTTCG...TCTTACTAACTGGTATTTATTAAGGGAGGTGCTCTGTAGGTCTGGAGCCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTTTTTCCTTCATGGTGTaGAGGGGAAGGAAAGATAGG +
Preference number: 5 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCFSFMV*RGRKDR
Trigger: CCTATCTTTCCTTCCCCTCAACACCATGAAGGAAAA...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACATCCCTTCAGTCTGCTaGTCAGGTTCCTTAAGGACG +
Preference number: 5 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYIPSVC*SGSLRT
Trigger: CGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGAT...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTTCTGTATCCTGGGCTTaGAGAAAACTTATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCSVSWA*RKLIRL
Trigger: CAGCCTGATAAGTTTTCTCAAAGCCCAGGATACAGA...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATTCTGTATCCTGGGCTTaGAGAAAACTTATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: CVCSAAILVSWARRSFRNSVSWA*RKLIRL
Trigger: CAGCCTGATAAGTTTTCTCAAAGCCCAGGATACAGA...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp CTGGCTCTATGCAAACAGGGCTCATCAAAAATCTTTATGTGCCAAAATGGATACCTGTCCAGACCTTGCTaGCTTTTGTCCAATTTGGCT +
Preference number: 5 (lower is better)
Translates to: LALCKQGSSKIFMCQNGYLSRPC*LLSNLA
Trigger: AGCCAAATTGGACAAAAGCAAGCAAGGTCTGGACAG...GTATCCATTTTGGCACATAAAGATTTTTGATGAGCCCTGTTTGCATAGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TTGGTTTCAGTTAAGAGGCTTCCTAATATTAGATTTGTGGGGCAGGCTAGGGATTTGTCTTGGCCATCATaGGGGCAATTTTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: LVSVKRLPNIRFVGQARDLSWPS*GQFSSQ
Trigger: CTGTGAAGAAAATTGCCCCAATGATGGCCAAGACAA...ATCCCTAGCCTGCCCCACAAATCTAATATTAGGAAGCCTCTTAACTGAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TACCATCCCTTCAGTCTGCTTGTCAGGTTCCTTAAGGACGCATATCTCAAATGTTTCCTAATATTAGATTaGTGGGGCAGGCTAGGGATA +
Preference number: 5 (lower is better)
Translates to: YHPFSLLVRFLKDAYLKCFLILD*WGRLGI
Trigger: TATCCCTAGCCTGCCCCACAAATCTAATATTAGGAA...ACATTTGAGATATGCGTCCTTAAGGAACCTGACAAGCAGACTGAAGGGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS-3UTR CAA 90 bp TGTGTCTGCTCTGCAGCCATTTTAGTAAGCTGGGCAAGGAGGTCATTTAGAAATAAAGCTTTAATTGTCTaGGCCATCATTGGGGCAATT +
Preference number: 5 (lower is better)
Translates to: CVCSAAILVSWARRSFRNKALIV*AIIGAI
Trigger: AATTGCCCCAATGATGGCCAAGACAATTAAAGCTTT...ATTTCTAAATGACCTCCTTGCCCAGCTTACTAAAATGGCTGCAGAGCAGACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS GCA 72 bp TCGCGTCGCGTCCTCGGGCCGCAGCTCCGCCCTCCGTaGATCCCCGGCGGAGACGGAAGCGCGCCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: SRRVLGPQLRPP*IPGGDGSAPGP
Trigger: GGGGCCAGGCGCGCTTCCGTCTCCGCCGGGGATGCACGGAGGGCGGAGCTGCGGCCCGAGGACGCGACGCGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS CCA 72 bp CCATCGCTGTCACTGGCGCGGCCTCCTCGCCGGAACTaGGCTCGCGTCGCGTCCTCGGGCCGCAGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: PSLSLARPPRRN*ARVASSGRSSA
Trigger: GGCGGAGCTGCGGCCCGAGGACGCGACGCGAGCCCAGTTCCGGCGAGGAGGCCGCGCCAGTGACAGCGATGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418390.6
ENST00000613537.4
CDS GCA 72 bp CGTACGCGCCTCCGCCGCCGGCACCCCCGCTCCCTGTaGTCGCGTGCTGAGCCCAAGCCTGGAAGACCTCTC +
Preference number: 6 (lower is better)
Translates to: RTRLRRRHPRSL*SRAEPKPGRPL
Trigger: GAGAGGTCTTCCAGGCTTGGGCTCAGCACGCGAGCACAGGGAGCGGGGGTGCCGGCGGCGGAGGCGCGTACG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418390.6
CDS CCA 72 bp GCTGACCACTGGTGCCAAGTGGGCACTGCTGGTGCTTaGGCCATCATAGGCCGGCTCCTCAGGGCTGGGGTT +
Preference number: 6 (lower is better)
Translates to: ADHWCQVGTAGA*AIIGRLLRAGV
Trigger: AACCCCAGCCCTGAGGAGCCGGCCTATGATGGCCCAAGCACCAGCAGTGCCCACTTGGCACCAGTGGTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CCA 72 bp CTTTCCCATGGGGTTCACCCAGGTGTCGTTCTTGGCTaGCCCCGAGTCTGTCCTGAAAGGCATTGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: LSHGVHPGVVLG*PRVCPERHCCG
Trigger: GCCACAGCAATGCCTTTCAGGACAGACTCGGGGCCAGCCAAGAACGACACCTGGGTGAACCCCATGGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CCA 72 bp TCTGCCTGTGGTCAGGGCTATAGGATCGGCTCCCCGTaGCTTTCCAGGTTTCTTGGTAGTCCCCCTCCATCT +
Preference number: 6 (lower is better)
Translates to: SACGQGYRIGSP*LSRFLGSPPPS
Trigger: AGATGGAGGGGGACTACCAAGAAACCTGGAAAGCCACGGGGAGCCGATCCTATAGCCCTGACCACAGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CCA 72 bp AGGATATCAGCTCGAGGGAAGGCAGTGGACGGTAATTaGCCTGTATCGCGGGTAACGGGAGGTCTGGCAACA +
Preference number: 6 (lower is better)
Translates to: RISARGKAVDGN*PVSRVTGGLAT
Trigger: TGTTGCCAGACCTCCCGTTACCCGCGATACAGGCCAATTACCGTCCACTGCCTTCCCTCGAGCTGATATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS GCA 72 bp CCTAGGATCATAGGAAACAGTGCTGCTGACCACTGGTaGCAAGTGGGCACTGCTGGTGCTTGGGCCATCATA +
Preference number: 6 (lower is better)
Translates to: PRIIGNSAADHW*QVGTAGAWAII
Trigger: TATGATGGCCCAAGCACCAGCAGTGCCCACTTGGCACCAGTGGTCAGCAGCACTGTTTCCTATGATCCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CAA 72 bp TTCTCTGGGTCTCTGTGCTTTGGCTTTTTCAGGTGGTaGTCTGAAGCGGCCTCTGAGGGAGGCAAACACTTC +
Preference number: 6 (lower is better)
Translates to: FSGSLCFGFFRW*SEAASEGGKHF
Trigger: GAAGTGTTTGCCTCCCTCAGAGGCCGCTTCAGACAACCACCTGAAAAAGCCAAAGCACAGAGACCCAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CAA 90 bp TTGTGTGATTTCTCTCTGCTCACCACAGAGGCCTTCTCATCACTCTaGGCATCCACGGGGCGTTTGTCCTTGTGGGAAGATTTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: LCDFSLLTTEAFSSL*ASTGRLSLWEDLCS
Trigger: GGAGCACAAATCTTCCCACAAGGACAAACGCCCCGTGGATGCCAAGAGTGATGAGAAGGCCTCTGTGGTGAGCAGAGAGAAATCACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CAA 90 bp AATTTGGCTTTCTCTGGGTCTCTGTGCTTTGGCTTTTTCAGGTGGTaGTCTGAAGCGGCCTCTGAGGGAGGCAAACACTTCTTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: NLAFSGSLCFGFFRW*SEAASEGGKHFFFR
Trigger: CCTGAAGAAGAAGTGTTTGCCTCCCTCAGAGGCCGCTTCAGACAACCACCTGAAAAAGCCAAAGCACAGAGACCCAGAGAAAGCCAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS GCA 72 bp CACTGGGCCACTAGGTCCCTGGCAAAGCTTCCAACATaGTCGTGTTTTCGCAAGCTATTTACTGTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: HWATRSLAKLPT*SCFRKLFTVFP
Trigger: TGGGAAAACAGTAAATAGCTTGCGAAAACACGAGCATGTTGGAAGCTTTGCCAGGGACCTAGTGGCCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418390.6
ENST00000487554.1
ENST00000609199.1
ENST00000613537.4
CDS CAA 90 bp CAACAGGTCTCCTGCTCCTTTTCCTGTGTCAAAGCTGTCCAGACCTaGCTTGCTTTTGTCCAATTTGGCTTTCTCTGGGTCTCTGTGCTT +
Preference number: 6 (lower is better)
Translates to: QQVSCSFSCVKAVQT*LAFVQFGFLWVSVL
Trigger: AAGCACAGAGACCCAGAGAAAGCCAAATTGGACAAAAGCAAGCAAGGTCTGGACAGCTTTGACACAGGAAAAGGAGCAGGAGACCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CCA 72 bp GGGATCTGTAGTGGTCGACGTACATCTGATGAGGACTaGTACAAGATGGAGGGGATTGAACATGGCCATAAT +
Preference number: 6 (lower is better)
Translates to: GICSGRRTSDED*YKMEGIEHGHN
Trigger: ATTATGGCCATGTTCAATCCCCTCCATCTTGTACCAGTCCTCATCAGATGTACGTCGACCACTACAGATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CAA 72 bp TCCTGCTCCTTTTCCTGTGTCAAAGCTGTCCAGACCTaGCTTGCTTTTGTCCAATTTGGCTTTCTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: SCSFSCVKAVQT*LAFVQFGFLWV
Trigger: GACCCAGAGAAAGCCAAATTGGACAAAAGCAAGCAAGGTCTGGACAGCTTTGACACAGGAAAAGGAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CAA 90 bp CCTGCTCCTTTTCCTGTGTCAAAGCTGTCCAGACCTTGCTTGCTTTaGTCCAATTTGGCTTTCTCTGGGTCTCTGTGCTTTGGCTTTTTC +
Preference number: 6 (lower is better)
Translates to: PAPFPVSKLSRPCLL*SNLAFSGSLCFGFF
Trigger: GAAAAAGCCAAAGCACAGAGACCCAGAGAAAGCCAAATTGGACAAAAGCAAGCAAGGTCTGGACAGCTTTGACACAGGAAAAGGAGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CAA 90 bp TTCCCTTCTGGAGTCTTTAGGTTGTTAGAACCCTTCTCTTTTACCTaGGGCAACAGGTCTCCTGCTCCTTTTCCTGTGTCAAAGCTGTCC +
Preference number: 6 (lower is better)
Translates to: FPSGVFRLLEPFSFT*GNRSPAPFPVSKLS
Trigger: GGACAGCTTTGACACAGGAAAAGGAGCAGGAGACCTGTTGCCCAAGGTAAAAGAGAAGGGTTCTAACAACCTAAAGACTCCAGAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS GCA 72 bp CTCCTTTTCCTGTGTCAAAGCTGTCCAGACCTTGCTTaGTTTTGTCCAATTTGGCTTTCTCTGGGTCTCTGT +
Preference number: 6 (lower is better)
Translates to: LLFLCQSCPDLA*FCPIWLSLGLC
Trigger: ACAGAGACCCAGAGAAAGCCAAATTGGACAAAAGCAAGCAAGGTCTGGACAGCTTTGACACAGGAAAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS TCA 72 bp CATATCTGTCTCCTCAACTTTAGGGAGGGAGCCCAGTaGCTTTCTATCCAAATTAGTTTTGACTTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: HICLLNFREGAQ*LSIQISFDFPF
Trigger: GAAGGGAAAGTCAAAACTAATTTGGATAGAAAGTCACTGGGCTCCCTCCCTAAAGTTGAGGAGACAGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4
CDS CAA 90 bp TTTCTATCCAAATTAGTTTTGACTTTCCCTTCTGGAGTCTTTAGGTaGTTAGAACCCTTCTCTTTTACCTTGGGCAACAGGTCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: FLSKLVLTFPSGVFR*LEPFSFTLGNRSPA
Trigger: AGCAGGAGACCTGTTGCCCAAGGTAAAAGAGAAGGGTTCTAACAACCTAAAGACTCCAGAAGGGAAAGTCAAAACTAATTTGGATAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418390.6
ENST00000609199.1
ENST00000613537.4