RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELMO3 (Homo sapiens)

Ensembl gene IDs: ENSG00000102890

Ensembl transcript IDs: ENST00000360833.6, ENST00000393997.8, ENST00000477898.5, ENST00000571587.6, ENST00000571638.1, ENST00000652269.1

Found 483 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCACCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCTCGCTCTTaGCCAGCTGGCCCAGGGCTGGGCTGCTCAAGGTCACACTCTCCA +
Preference number: 1 (lower is better)
Translates to: SPVGAPAAYPGAPRS*PAGPGLGCSRSHSP
Trigger: TGGAGAGTGTGACCTTGAGCAGCCCAGCCCTGGGCCAGCTGGTCAAGAGCGAGGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
3UTR GCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTaGACTCCTCTACCCACTGCCCTTCATGGCTGCTGCAGTGGCCGC +
Preference number: 1 (lower is better)
Translates to: QADFISAAISAGQGA*TPLPTALHGCCSGR
Trigger: GCGGCCACTGCAGCAGCCATGAAGGGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
3UTR CAA 90 bp ATCACCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCTCGCTCTaGACCAGCTGGCCCAGGGCTGGGCTGCTCAAGGTCACACTCTCC +
Preference number: 2 (lower is better)
Translates to: ITCRCTSSLSRGTSL*TSWPRAGLLKVTLS
Trigger: GGAGAGTGTGACCTTGAGCAGCCCAGCCCTGGGCCAGCTGGTCAAGAGCGAGGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
3UTR-3UTR TCA 90 bp TCTGAGAAGGCCCTCAGGCTGAGGGCCAGCACCTCTCCTAGGTGGGGCCGTGCTCGCGGTTATTCTCGGTaGTGTATCTCCGGTGCCCAT +
Preference number: 2 (lower is better)
Translates to: SEKALRLRASTSPRWGRARGYSR*CISGAH
Trigger: ATGGGCACCGGAGATACATCACCGAGAATAACCGCG...AGCACGGCCCCACCTAGGAGAGGTGCTGGCCCTCAGCCTGAGGGCCTTCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
3UTR-3UTR GCA 90 bp TGCTGGTTCATCACCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCTCGCTCGGCCCAGGGCTGGGCTaGTCAAGGTCACACTCTCCA +
Preference number: 2 (lower is better)
Translates to: CWFITCRCTSSLSRGTSLGPGLG*SRSHSP
Trigger: TGGAGAGTGTGACCTTGAGCAGCCCAGCCCTGGGCC...GAGCGAGGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAACCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
3UTR-3UTR GCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGCCCTTCATGGCTGCTaGAGTGGCCGCAGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSALHGC*SGRSCG
Trigger: GCCACAGCTGCGGCCACTGCAGCAGCCATGAAGGGC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
3UTR-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCGCCCTTCATGGCTGCTaGAGTGGCCGCAGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: DFISAAISAGQGACTPLPALHGC*SGRSCG
Trigger: GCCACAGCTGCGGCCACTGCAGCAGCCATGAAGGGC...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
3UTR-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCTTCATGGCTGCTaGAGTGGCCGCAGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: FISAAISAGQGACTPLPTALHGC*SGRSCG
Trigger: GCCACAGCTGCGGCCACTGCAGCAGCCATGAAGGGC...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
3UTR-3UTR GCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAACTGCCCTTCATGGCTaGTGCAGTGGCCGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: ADFISAAISAGQGACTPLTALHG*CSGRSC
Trigger: ACAGCTGCGGCCACTGCAGCAGCCATGAAGGGCAGT...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
3UTR-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACTGCCCTTCATGGCTaGTGCAGTGGCCGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSTALHG*CSGRSC
Trigger: ACAGCTGCGGCCACTGCAGCAGCCATGAAGGGCAGT...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
3UTR-3UTR CCA 90 bp GATGTTCTTATAGATGAACTGGCGAAGGTTCCTCTTGCGTTCCACAGGGCTGGCGCAGGGCCATGGCCTTaGTTTGCAGCTGCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: DVLIDELAKVPLAFHRAGAGPWP*FAAAGS
Trigger: TGAACCAGCAGCTGCAAACCAAGGCCATGGCCCTGC...GCCAGCCCTGTGGAACGCAAGAGGAACCTTCGCCAGTTCATCTATAAGAACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
3UTR-3UTR GCA 90 bp GTGGATGATGTTCTTATAGATGAACTGGCGAAGGTTCCTCTTGCGTTCCACAGGCAGGACACCACGCCGTaGTCCATGAGCTCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: VDDVLIDELAKVPLAFHRQDTTP*SMSSEK
Trigger: CTTCTCAGAGCTCATGGAGCACGGCGTGGTGTCCTG...CCTGTGGAACGCAAGAGGAACCTTCGCCAGTTCATCTATAAGAACATCATCCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
3UTR-3UTR GCA 90 bp GTGGATGATGTTCTTATAGATGAACTGGCGAAGGTTCCTCTTGCGTTCCACAGGGCCATGGCCTTGGTTTaGAGCTGCTGGTTCATCACC +
Preference number: 2 (lower is better)
Translates to: VDDVLIDELAKVPLAFHRAMALV*SCWFIT
Trigger: GGTGATGAACCAGCAGCTGCAAACCAAGGCCATGGC...CCTGTGGAACGCAAGAGGAACCTTCGCCAGTTCATCTATAAGAACATCATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
3UTR-3UTR CAA 90 bp TGCAGCTGCTGGTTCATCACCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCAGGATGCTGCCATTCTaGATCTCCGCGCGGTTATTC +
Preference number: 3 (lower is better)
Translates to: CSCWFITCRCTSSLSRGTRMLPF*ISARLF
Trigger: GAATAACCGCGCGGAGATCAAGAATGGCAGCATCCT...GGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAACCAGCAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
3UTR GCA 72 bp TGTTCACGTAGCACACCACCTTCCTCACAAAGGGGATaGTCAGAGTCTCCCAGGACACCACGCCGTGCTCCA +
Preference number: 3 (lower is better)
Translates to: CSRSTPPSSQRG*SESPRTPRRAP
Trigger: TGGAGCACGGCGTGGTGTCCTGGGAGACTCTGAGCATCCCCTTTGTGAGGAAGGTGGTGTGCTACGTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
3UTR GCA 72 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTaGACTCCTCTACCCACTGCCCTTCATGGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: FISAAISAGQGA*TPLPTALHGCC
Trigger: GCAGCAGCCATGAAGGGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TCTGAGAAGGCCCTCAGGCTGAGGGCCAGCACCTCTCCTAGGTGGGGCCGTGCTCTGGCCTGGGGCCCCTaGGGACGAGGAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SEKALRLRASTSPRWGRALAWGP*GRGGPP
Trigger: GGGAGGACCTCCTCGTCCCCAGGGGCCCCAGGCCAG...AGCACGGCCCCACCTAGGAGAGGTGCTGGCCCTCAGCCTGAGGGCCTTCTCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR CCA 90 bp GAGAAGGCCCTCAGGCTGAGGGCCAGCACCTCTCCTAGGTGGGGCCGTGCTGAGTCCGCGGAGGCGCCATaGTCCAGCTGGGACGTGGGC +
Preference number: 4 (lower is better)
Translates to: EKALRLRASTSPRWGRAESAEAP*SSWDVG
Trigger: GCCCACGTCCCAGCTGGACCATGGCGCCTCCGCGGA...CTCAGCACGGCCCCACCTAGGAGAGGTGCTGGCCCTCAGCCTGAGGGCCTTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp TCTGAGAAGGCCCTCAGGCTGAGGGCCAGCACCTCTCCTAGGTGGGGCCGTGCTACCTGCGGCCAAGGGTaGACCTGGCCTGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SEKALRLRASTSPRWGRATCGQG*TWPGAP
Trigger: AGGGGCCCCAGGCCAGGTGCACCCTTGGCCGCAGGT...AGCACGGCCCCACCTAGGAGAGGTGCTGGCCCTCAGCCTGAGGGCCTTCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571587.6
3UTR CAA 72 bp AGGTGCACCAGCAGCCTATCCAGGGGCACCTCGCTCTaGACCAGCTGGCCCAGGGCTGGGCTGCTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: RCTSSLSRGTSL*TSWPRAGLLKV
Trigger: GACCTTGAGCAGCCCAGCCCTGGGCCAGCTGGTCAAGAGCGAGGTGCCCCTGGATAGGCTGCTGGTGCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR TCA 90 bp GCTGCTGGTTCATCACCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCTCGCCCTGGTCCAGCTGGATaGGCTGCGGGATGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: AAGSSPVGAPAAYPGAPRPGPAG*AAGWRH
Trigger: GTGACGCCATCCCGCAGCTCATCCAGCTGGACCAGG...GCGAGGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAACCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR TCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGGGGCACCTCGCTCTTaGCCAGCTGGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAGAPRS*PAGPGL
Trigger: CAGCCCTGGGCCAGCTGGTCAAGAGCGAGGTGCCCC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CGTGCTGAGGCACAGGATGCTGCCATTCTTGATCTCCGCGCGGTTATTCTCGGTGGGGCACCTCGCTCTTaGCCAGCTGGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RAEAQDAAILDLRAVILGGAPRS*PAGPGL
Trigger: CAGCCCTGGGCCAGCTGGTCAAGAGCGAGGTGCCCC...ACCGAGAATAACCGCGCGGAGATCAAGAATGGCAGCATCCTGTGCCTCAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp TGCAGCTGCTGGTTCATCACCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCTGGGACGTGGGCGCCTaGACTTTCCGGAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: CSCWFITCRCTSSLSRGTWDVGA*TFRRPC
Trigger: GCACGGTCTCCGGAAAGTGCAGGCGCCCACGTCCCA...GGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAACCAGCAGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp TGCTGGTTCATCACCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCTCGCTCACAGGGCTGGCCCCCTaGAGCAAGGCTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CWFITCRCTSSLSRGTSLTGLAP*SKAVSR
Trigger: CCTGCTGACAGCCTTGCTGCAGGGGGCCAGCCCTGT...GAGCGAGGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAACCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCAGGGGCGTCCGCATaGGCGGCTCCAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCPGASA*AAPAAP
Trigger: TGGGGCTGCTGGAGCCGCGCATGCGGACGCCCCTGG...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TGCTGGTTCATCACCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCTCGCTCACTTTCCGGAGACCGTaGACCTGCGGCCAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: CWFITCRCTSSLSRGTSLTFRRP*TCGQGC
Trigger: GCACCCTTGGCCGCAGGTGCACGGTCTCCGGAAAGT...GAGCGAGGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAACCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp AGGTGGGGCCGTGCTGAGGCACAGGATGCTGCCATTCTTGATCTCCGCGCGGTTTCCAGCTGGATGAGCTaGGGGATGGCGTCACGCATC +
Preference number: 4 (lower is better)
Translates to: RWGRAEAQDAAILDLRAVSSWMS*GMASRI
Trigger: GATGCGTGACGCCATCCCGCAGCTCATCCAGCTGGA...AACCGCGCGGAGATCAAGAATGGCAGCATCCTGTGCCTCAGCACGGCCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp TGCAGCTGCTGGTTCATCACCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCGGCCCAGGGCTGGGCTaGTCAAGGTCACACTCTCCA +
Preference number: 4 (lower is better)
Translates to: CSCWFITCRCTSSLSRGTGPGLG*SRSHSP
Trigger: TGGAGAGTGTGACCTTGAGCAGCCCAGCCCTGGGCC...GGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAACCAGCAGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCCCAGGGGCGTCCGCATaGGCGGCTCCAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSPGASA*AAPAAP
Trigger: TGGGGCTGCTGGAGCCGCGCATGCGGACGCCCCTGG...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGCCTGGCGTAGGACCTaGAGCTGCTCCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAAWRRT*SCSRCS
Trigger: GGAGCAGCGGGAGCAGCTGCAGGTCCTACGCCAGGC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGCGCCATGGTCCAGCTaGGACGTGGGCGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAAPWSS*DVGACT
Trigger: AGTGCAGGCGCCCACGTCCCAGCTGGACCATGGCGC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCTCCGCGGAGGCGCCATaGTCCAGCTGGGACGTGGGC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCSAEAP*SSWDVG
Trigger: GCCCACGTCCCAGCTGGACCATGGCGCCTCCGCGGA...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR TCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGGGGCACCTCGCTCTTaGCCAGCTGGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLGAPRS*PAGPGL
Trigger: CAGCCCTGGGCCAGCTGGTCAAGAGCGAGGTGCCCC...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGGCGCCGCCGGCTGCTaGTCTTGCGGAAGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSGAAGC*SCGRAS
Trigger: GGACGCTCTTCCGCAAGATCAGCAGCCGGCGGCGCC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGGCGCCGCCGGCTGCTaGTCTTGCGGAAGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLGAAGC*SCGRAS
Trigger: GGACGCTCTTCCGCAAGATCAGCAGCCGGCGGCGCC...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGACCTGCGGCCAAGGGTaGACCTGGCCTGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLTCGQG*TWPGAP
Trigger: AGGGGCCCCAGGCCAGGTGCACCCTTGGCCGCAGGT...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp GCTGCTGGTTCATCACCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCTCGCCAGGACACCACGCCGTaGTCCATGAGCTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: AAGSSPVGAPAAYPGAPRQDTTP*SMSSEK
Trigger: CTTCTCAGAGCTCATGGAGCACGGCGTGGTGTCCTG...GCGAGGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAACCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCACAGGGCTGGCCCCCTaGAGCAAGGCTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTATGLAP*SKAVSR
Trigger: CCTGCTGACAGCCTTGCTGCAGGGGGCCAGCCCTGT...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCAGGGGCGTCCGCATaGGCGGCTCCAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPPGASA*AAPAAP
Trigger: TGGGGCTGCTGGAGCCGCGCATGCGGACGCCCCTGG...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTCCAGGGGCGTCCGCATaGGCGGCTCCAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSPGASA*AAPAAP
Trigger: TGGGGCTGCTGGAGCCGCGCATGCGGACGCCCCTGG...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCGTAGGACCTGCAGCTaGTCCCGCTGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTARRTCS*SRCSWL
Trigger: CAGCCAGGAGCAGCGGGAGCAGCTGCAGGTCCTACG...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCGCACCGTCAGCTGGATaGTGCCCCGGGCAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCAPSAG*CPGQRG
Trigger: GCCCCTTTGCCCGGGGCAGCATCCAGCTGACGGTGC...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCAGAGTGCGGGCCAGCTaGTCCCGCACCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTARVRAS*SRTTCM
Trigger: CATGCAGGTGGTGCGGGAGCAGCTGGCCCGCACTCT...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGCCGTGTCTGCTCGCTaGCCATGGGACTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAAVSAR*PWDCPA
Trigger: TGCTGGGCAGTCCCATGGGCAGCGAGCAGACACGGC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGCCCTTCATGGCTGCTaGAGTGGCCGCAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAALHGC*SGRSCG
Trigger: GCCACAGCTGCGGCCACTGCAGCAGCCATGAAGGGC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCTGGCCTGGGGCCCCTaGGGACGAGGAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLLAWGP*GRGGPP
Trigger: GGGAGGACCTCCTCGTCCCCAGGGGCCCCAGGCCAG...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGGTCCAGCTGGGACGTaGGCGCCTGCACTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAGPAGT*APALSG
Trigger: TCCGGAAAGTGCAGGCGCCCACGTCCCAGCTGGACC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCTCCGCGGAGGCGCCATaGTCCAGCTGGGACGTGGGC +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPSAEAP*SSWDVG
Trigger: GCCCACGTCCCAGCTGGACCATGGCGCCTCCGCGGA...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR TCA 90 bp GATCTCCGCGCGGTTATTCTCGGTGATGTATCTCCGGTGCCCATCCGCAAACTGTCCCTTTCCGAGACCTaGCCTCGGTGTCCCGCACTC +
Preference number: 4 (lower is better)
Translates to: DLRAVILGDVSPVPIRKLSLSET*PRCPAL
Trigger: GAGTGCGGGACACCGAGGTCAGGTCTCGGAAAGGGA...CAGTTTGCGGATGGGCACCGGAGATACATCACCGAGAATAACCGCGCGGAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR TCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACGGGGCACCTCGCTCTTaGCCAGCTGGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYGAPRS*PAGPGL
Trigger: CAGCCCTGGGCCAGCTGGTCAAGAGCGAGGTGCCCC...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGGGCACCTCGCTCTTaGCCAGCTGGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTGAPRS*PAGPGL
Trigger: CAGCCCTGGGCCAGCTGGTCAAGAGCGAGGTGCCCC...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCGGCGCCGCCGGCTGCTaGTCTTGCGGAAGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTGAAGC*SCGRAS
Trigger: GGACGCTCTTCCGCAAGATCAGCAGCCGGCGGCGCC...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGCGCCGCCGGCTGCTaGTCTTGCGGAAGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTGAAGC*SCGRAS
Trigger: GGACGCTCTTCCGCAAGATCAGCAGCCGGCGGCGCC...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CTAGGTGGGGCCGTGCTGAGGCACAGGATGCTGCCATTCTTGATCTCCGCGCGGGGATGCTGCCATTCTTaGTCTCCGCGCGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: LGGAVLRHRMLPFLISARGCCHS*SPRGYS
Trigger: AGAATAACCGCGCGGAGATCAAGAATGGCAGCATCC...CCGCGCGGAGATCAAGAATGGCAGCATCCTGTGCCTCAGCACGGCCCCACCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCGCGGCCCAGACTGCTaGTCCTGGCCATGCAACGCG +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPRGPDC*SWPCNA
Trigger: CGCGTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCG...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCTGCGGCCAAGGGTaGACCTGGCCTGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSTCGQG*TWPGAP
Trigger: AGGGGCCCCAGGCCAGGTGCACCCTTGGCCGCAGGT...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCGCCTGGCGTAGGACCTaGAGCTGCTCCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPAWRRT*SCSRCS
Trigger: GGAGCAGCGGGAGCAGCTGCAGGTCCTACGCCAGGC...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGCACCGTCAGCTGGATaGTGCCCCGGGCAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSAPSAG*CPGQRG
Trigger: GCCCCTTTGCCCGGGGCAGCATCCAGCTGACGGTGC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCAGAGTGCGGGCCAGCTaGTCCCGCACCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCRVRAS*SRTTCM
Trigger: CATGCAGGTGGTGCGGGAGCAGCTGGCCCGCACTCT...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCAGTGTGCCCTCCTGGTaGAGCCGTTCAGTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTASVPSW*SRSVCR
Trigger: GCGGCAGACTGAACGGCTGCACCAGGAGGGCACACT...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCAGGCGGAGCAAGCGCTaGTGGCGGATCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCRRSKR*WRIRPM
Trigger: CATGGGCCTGATCCGCCAGCAGCGCTTGCTCCGCCT...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCCAGACTGCTGCTCCTaGCCATGCAACGCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAPDCCS*PCNAAF
Trigger: GAAGGCCGCGTTGCATGGCCAGGAGCAGCAGTCTGG...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp GTTATTCTCGGTGATGTATCTCCGGTGCCCATCCGCAAACTGCAGGGCGTAACGGGTCCAGCTGGGACGTaGGCGCCTGCACTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: VILGDVSPVPIRKLQGVTGPAGT*APALSG
Trigger: TCCGGAAAGTGCAGGCGCCCACGTCCCAGCTGGACC...CGTTACGCCCTGCAGTTTGCGGATGGGCACCGGAGATACATCACCGAGAATAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGCGCCATGGTCCAGCTaGGACGTGGGCGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSAPWSS*DVGACT
Trigger: AGTGCAGGCGCCCACGTCCCAGCTGGACCATGGCGC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTCCGCGGAGGCGCCATaGTCCAGCTGGGACGTGGGC +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLSAEAP*SSWDVG
Trigger: GCCCACGTCCCAGCTGGACCATGGCGCCTCCGCGGA...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCTTCGCCTGGTCCAGCTaGATGAGCTGCGGGATGGCG +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAFAWSS*MSCGMA
Trigger: CGCCATCCCGCAGCTCATCCAGCTGGACCAGGCGAA...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCACCTCGAAGGCAGCCTaGCGTAGGACCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTATSKAA*RRTCSC
Trigger: GCAGCTGCAGGTCCTACGCCAGGCTGCCTTCGAGGT...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGGAGCAAGCGCTGCTaGCGGATCAGGCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCRSKRC*RIRPMS
Trigger: GCTCATGGGCCTGATCCGCCAGCAGCGCTTGCTCCG...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCTCTGCTCGCTGCCCATaGGACTGCCCAGCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTASARCP*DCPARH
Trigger: GTGCCTTGCTGGGCAGTCCCATGGGCAGCGAGCAGA...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCTCAGCCTCAAGGTCTaGGGCCGTGCTGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTALSLKV*GRAEAQ
Trigger: CTGTGCCTCAGCACGGCCCCAGACCTTGAGGCTGAG...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCTCCCTTTCCGAGACCTaGCCTCGGTGTCCCGCACTC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCSLSET*PRCPAL
Trigger: GAGTGCGGGACACCGAGGTCAGGTCTCGGAAAGGGA...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR TCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCCCTGGTCCAGCTGGATaGGCTGCGGGATGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSPGPAG*AAGWRH
Trigger: GTGACGCCATCCCGCAGCTCATCCAGCTGGACCAGG...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR TCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCAGAAGGCCCTCAGGCTaGGGGCCAGCACCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCRRPSG*GPAPLL
Trigger: TAGGAGAGGTGCTGGCCCTCAGCCTGAGGGCCTTCT...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCGCGGCCCAGACTGCTaGTCCTGGCCATGCAACGCG +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPRGPDC*SWPCNA
Trigger: CGCGTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCG...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTCGGAGACCGTGCACCTaGGGCCAAGGGTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTRRPCT*GQGCTW
Trigger: CCAGGTGCACCCTTGGCCGCAGGTGCACGGTCTCCG...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCGGAGACCGTGCACCTaGGGCCAAGGGTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPRRPCT*GQGCTW
Trigger: CCAGGTGCACCCTTGGCCGCAGGTGCACGGTCTCCG...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCACTTTCCGGAGACCGTaGACCTGCGGCCAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCTFRRP*TCGQGC
Trigger: GCACCCTTGGCCGCAGGTGCACGGTCTCCGGAAAGT...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCTGGGACGTGGGCGCCTaGACTTTCCGGAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPWDVGA*TFRRPC
Trigger: GCACGGTCTCCGGAAAGTGCAGGCGCCCACGTCCCA...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACAGGGCTGGCCCCCTaGAGCAAGGCTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPTGLAP*SKAVSR
Trigger: CCTGCTGACAGCCTTGCTGCAGGGGGCCAGCCCTGT...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCGTAGGACCTGCAGCTaGTCCCGCTGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLRRTCS*SRCSWL
Trigger: CAGCCAGGAGCAGCGGGAGCAGCTGCAGGTCCTACG...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGCCTGGCGTAGGACCTaGAGCTGCTCCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSAWRRT*SCSRCS
Trigger: GGAGCAGCGGGAGCAGCTGCAGGTCCTACGCCAGGC...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCGCCTGGCGTAGGACCTaGAGCTGCTCCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTAWRRT*SCSRCS
Trigger: GGAGCAGCGGGAGCAGCTGCAGGTCCTACGCCAGGC...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCCCGTCAGCTGGATGCTaGCCCGGGCAAAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSPSAGC*PGQRGT
Trigger: AGTGCCCCTTTGCCCGGGGCAGCATCCAGCTGACGG...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCCGTCAGCTGGATGCTaGCCCGGGCAAAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPPSAGC*PGQRGT
Trigger: AGTGCCCCTTTGCCCGGGGCAGCATCCAGCTGACGG...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAGCACCGTCAGCTGGATaGTGCCCCGGGCAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLAPSAG*CPGQRG
Trigger: GCCCCTTTGCCCGGGGCAGCATCCAGCTGACGGTGC...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACGCACCGTCAGCTGGATaGTGCCCCGGGCAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYAPSAG*CPGQRG
Trigger: GCCCCTTTGCCCGGGGCAGCATCCAGCTGACGGTGC...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCAGAGTGCGGGCCAGCTaGTCCCGCACCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPRVRAS*SRTTCM
Trigger: CATGCAGGTGGTGCGGGAGCAGCTGGCCCGCACTCT...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTGCAGCCGTTCAGTCTaGCGCAGCCGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSCSRSV*RSRSTS
Trigger: GGAGGTGCTGCGGCTGCGGCAGACTGAACGGCTGCA...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCAGGCGGAGCAAGCGCTaGTGGCGGATCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPRRSKR*WRIRPM
Trigger: CATGGGCCTGATCCGCCAGCAGCGCTTGCTCCGCCT...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGAGGCGGAGCAAGCGCTaGTGGCGGATCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLRRSKR*WRIRPM
Trigger: CATGGGCCTGATCCGCCAGCAGCGCTTGCTCCGCCT...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCTTGCCTGTCAGGAGTaGCCTCATGTCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTALACQE*PHVGHR
Trigger: CCTGTGGCCGACATGAGGGCACTCCTGACAGGCAAG...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCAGGTCCAGCCGTGTCTaGTCGCTGCCCATGGGACTG +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCRSSRV*SLPMGL
Trigger: CAGTCCCATGGGCAGCGAGCAGACACGGCTGGACCT...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGCCCTTCATGGCTGCTaGAGTGGCCGCAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLALHGC*SGRSCG
Trigger: GCCACAGCTGCGGCCACTGCAGCAGCCATGAAGGGC...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCGCTGGTCAGGGTGCCTaGACTCCTCTACCCACTGCC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCAGQGA*TPLPTA
Trigger: GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGC...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCTCTGCTGGTCAGGGTaGCTGCACTCCTCTACCCAC +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTALCWSG*LHSSTH
Trigger: GTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAG...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGGTCCAGCTGGGACGTaGGCGCCTGCACTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSGPAGT*APALSG
Trigger: TCCGGAAAGTGCAGGCGCCCACGTCCCAGCTGGACC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACGCGCCATGGTCCAGCTaGGACGTGGGCGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYAPWSS*DVGACT
Trigger: AGTGCAGGCGCCCACGTCCCAGCTGGACCATGGCGC...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCTTCGCCTGGTCCAGCTaGATGAGCTGCGGGATGGCG +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCFAWSS*MSCGMA
Trigger: CGCCATCCCGCAGCTCATCCAGCTGGACCAGGCGAA...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGCCAGGGGCTTCGCCTaGTCCAGCTGGATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSARGFA*SSWMSC
Trigger: GCAGCTCATCCAGCTGGACCAGGCGAAGCCCCTGGC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCACCGGCTGTACGCGCTaGGCGCGTTTCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTATGCTR*ARFWRS
Trigger: ACTTCTCCAGAAACGCGCCCAGCGCGTACAGCCGGT...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCGGAGCAAGCGCTGCTaGCGGATCAGGCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLRSKRC*RIRPMS
Trigger: GCTCATGGGCCTGATCCGCCAGCAGCGCTTGCTCCG...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCCGGAGCAAGCGCTGCTaGCGGATCAGGCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSRSKRC*RIRPMS
Trigger: GCTCATGGGCCTGATCCGCCAGCAGCGCTTGCTCCG...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCAACCACAGCTTATCCTaGCGCCGCCGGCTGCTGATC +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTANHSLS*RRRLLI
Trigger: GATCAGCAGCCGGCGGCGCCAGGATAAGCTGTGGTT...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCCTTCTCCCGGACATaGGGGCAGTCCTTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCPFSRT*GQSLPV
Trigger: GACAGGCAAGGACTGCCCCCATGTCCGGGAGAAGGG...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCGTGGCCGCTCGGGGATaGGCACGTTCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPVAARG*ARSPAP
Trigger: TGGAGCTGGAGAACGTGCCCATCCCCGAGCGGCCAC...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCCTTTCCGAGACCTaGCCTCGGTGTCCCGCACTC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSSLSET*PRCPAL
Trigger: GAGTGCGGGACACCGAGGTCAGGTCTCGGAAAGGGA...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR TCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTCCTGGTCCAGCTGGATaGGCTGCGGGATGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSPGPAG*AAGWRH
Trigger: GTGACGCCATCCCGCAGCTCATCCAGCTGGACCAGG...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR TCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCAGAAGGCCCTCAGGCTaGGGGCCAGCACCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSRRPSG*GPAPLL
Trigger: TAGGAGAGGTGCTGGCCCTCAGCCTGAGGGCCTTCT...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCACGCCGTGCTCCATaGGCTCTGAGAAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLPRRAP*ALRRPS
Trigger: TGAGGGCCTTCTCAGAGCTCATGGAGCACGGCGTGG...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCGGCGGATCAGGCCCATaGGCTCTGGCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCGGSGP*ALASAS
Trigger: AGAAGCTGAAGCCAGAGCTCATGGGCCTGATCCGCC...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCTGCCCAGCAAGGCACTaGGCCCATCTGTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCCPARH*AHLSTG
Trigger: ACCTGTGGACAGATGGGCTCAGTGCCTTGCTGGGCA...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TGGGGCCGTGCTGAGGCACAGGATGCTGCCATTCTTGATCTCCGCGCGGTTATTCGCGGTTATTCTCGGTaGTGTATCTCCGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: WGRAEAQDAAILDLRAVIRGYSR*CISGAH
Trigger: ATGGGCACCGGAGATACATCACCGAGAATAACCGCG...AATAACCGCGCGGAGATCAAGAATGGCAGCATCCTGTGCCTCAGCACGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGACTCGCGGCCCAGACTaGTGCTCCTGGCCATGCAAC +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLTRGPD*CSWPCN
Trigger: GTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCGAGT...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTATGGGACGTGGGCGCCTaGACTTTCCGGAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLWDVGA*TFRRPC
Trigger: GCACGGTCTCCGGAAAGTGCAGGCGCCCACGTCCCA...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCTCCAGCTGGATGAGCTaGGGGATGGCGTCACGCATC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCSSWMS*GMASRI
Trigger: GATGCGTGACGCCATCCCGCAGCTCATCCAGCTGGA...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGGCCCAGGGCTGGGCTaGTCAAGGTCACACTCTCCA +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSGPGLG*SRSHSP
Trigger: TGGAGAGTGTGACCTTGAGCAGCCCAGCCCTGGGCC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAACAGGGCTGGCCCCCTaGAGCAAGGCTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLTGLAP*SKAVSR
Trigger: CCTGCTGACAGCCTTGCTGCAGGGGGCCAGCCCTGT...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCACAGGGCTGGCCCCCTaGAGCAAGGCTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLTGLAP*SKAVSR
Trigger: CCTGCTGACAGCCTTGCTGCAGGGGGCCAGCCCTGT...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCGTAGGACCTGCAGCTaGTCCCGCTGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLRRTCS*SRCSWL
Trigger: CAGCCAGGAGCAGCGGGAGCAGCTGCAGGTCCTACG...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTCGTAGGACCTGCAGCTaGTCCCGCTGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSRRTCS*SRCSWL
Trigger: CAGCCAGGAGCAGCGGGAGCAGCTGCAGGTCCTACG...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCTGCTCCCGCACCACCTaGATGACCTTGTCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTACSRTT*MTLSKS
Trigger: GGACTTCGACAAGGTCATGCAGGTGGTGCGGGAGCA...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCAGAGTGCGGGCCAGCTaGTCCCGCACCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLRVRAS*SRTTCM
Trigger: CATGCAGGTGGTGCGGGAGCAGCTGGCCCGCACTCT...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCTGCAGCCGTTCAGTCTaGCGCAGCCGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTCSRSV*RSRSTS
Trigger: GGAGGTGCTGCGGCTGCGGCAGACTGAACGGCTGCA...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTTGCAGCCGTTCAGTCTaGCGCAGCCGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTCSRSV*RSRSTS
Trigger: GGAGGTGCTGCGGCTGCGGCAGACTGAACGGCTGCA...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGCAGCCGTTCAGTCTaGCGCAGCCGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLCSRSV*RSRSTS
Trigger: GGAGGTGCTGCGGCTGCGGCAGACTGAACGGCTGCA...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGCCGTGTCTGCTCGCTaGCCATGGGACTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSAVSAR*PWDCPA
Trigger: TGCTGGGCAGTCCCATGGGCAGCGAGCAGACACGGC...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTGCCGTGTCTGCTCGCTaGCCATGGGACTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPAVSAR*PWDCPA
Trigger: TGCTGGGCAGTCCCATGGGCAGCGAGCAGACACGGC...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACGCCGTGTCTGCTCGCTaGCCATGGGACTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYAVSAR*PWDCPA
Trigger: TGCTGGGCAGTCCCATGGGCAGCGAGCAGACACGGC...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGAGGTCCAGCCGTGTCTaGTCGCTGCCCATGGGACTG +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLRSSRV*SLPMGL
Trigger: CAGTCCCATGGGCAGCGAGCAGACACGGCTGGACCT...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAGCCCTTCATGGCTGCTaGAGTGGCCGCAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLALHGC*SGRSCG
Trigger: GCCACAGCTGCGGCCACTGCAGCAGCCATGAAGGGC...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCACTCCTCTACCCACTaGCCTTCATGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAHSSTH*PSWLLQ
Trigger: CTGCAGCAGCCATGAAGGGCAGTGGGTAGAGGAGTG...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGCTGGTCAGGGTGCCTaGACTCCTCTACCCACTGCC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSAGQGA*TPLPTA
Trigger: GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCTCTGCTGGTCAGGGTaGCTGCACTCCTCTACCCAC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCLCWSG*LHSSTH
Trigger: GTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAG...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCAGACTGCTGCTCCTaGCCATGCAACGCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLPDCCS*PCNAAF
Trigger: GAAGGCCGCGTTGCATGGCCAGGAGCAGCAGTCTGG...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGGTCCAGCTGGGACGTaGGCGCCTGCACTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSGPAGT*APALSG
Trigger: TCCGGAAAGTGCAGGCGCCCACGTCCCAGCTGGACC...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTGCCAGGGGCTTCGCCTaGTCCAGCTGGATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPARGFA*SSWMSC
Trigger: GCAGCTCATCCAGCTGGACCAGGCGAAGCCCCTGGC...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp AGGTGGGGCCGTGCTGAGGCACAGGATGCTGCCATTCTTGATCTCCGCGCGGTTTTGGTTTGCAGCTGCTaGTTCATCACCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: RWGRAEAQDAAILDLRAVLVCSC*FITCRC
Trigger: GCACCTACAGGTGATGAACCAGCAGCTGCAAACCAA...AACCGCGCGGAGATCAAGAATGGCAGCATCCTGTGCCTCAGCACGGCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCTGTCAGCAGGGCCATaGCCTTGGTTTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTALSAGP*PWFAAA
Trigger: AGCAGCTGCAAACCAAGGCCATGGCCCTGCTGACAG...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCACCGGCTGTACGCGCTaGGCGCGTTTCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCTGCTR*ARFWRS
Trigger: ACTTCTCCAGAAACGCGCCCAGCGCGTACAGCCGGT...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCAGCAGCACCGTCAGCTaGATGCTGCCCCGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPSSTVS*MLPRAK
Trigger: CTTTGCCCGGGGCAGCATCCAGCTGACGGTGCTGCT...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCAACCACAGCTTATCCTaGCGCCGCCGGCTGCTGATC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCNHSLS*RRRLLI
Trigger: GATCAGCAGCCGGCGGCGCCAGGATAAGCTGTGGTT...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCCCCTTCTCCCGGACATaGGGGCAGTCCTTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSPFSRT*GQSLPV
Trigger: GACAGGCAAGGACTGCCCCCATGTCCGGGAGAAGGG...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCCAGCAGACGCAGCTTaGTCTCCATGGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAPADAA*SPWSAA
Trigger: AGCTGCTGACCATGGAGACCAAGCTGCGTCTGCTGG...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGTGGCCGCTCGGGGATaGGCACGTTCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSVAARG*ARSPAP
Trigger: TGGAGCTGGAGAACGTGCCCATCCCCGAGCGGCCAC...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCGTGGCCGCTCGGGGATaGGCACGTTCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLVAARG*ARSPAP
Trigger: TGGAGCTGGAGAACGTGCCCATCCCCGAGCGGCCAC...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTGTGGCCGCTCGGGGATaGGCACGTTCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPVAARG*ARSPAP
Trigger: TGGAGCTGGAGAACGTGCCCATCCCCGAGCGGCCAC...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
3UTR CAA 72 bp GGTGGGGCCGTGCTGAGGCACAGGATGCTGCCATTCTaGATCTCCGCGCGGTTATTCTCGGTGATGTATCTC +
Preference number: 4 (lower is better)
Translates to: GGAVLRHRMLPF*ISARLFSVMYL
Trigger: GAGATACATCACCGAGAATAACCGCGCGGAGATCAAGAATGGCAGCATCCTGTGCCTCAGCACGGCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR TCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTTCCCTTTCCGAGACCTaGCCTCGGTGTCCCGCACTC +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPSLSET*PRCPAL
Trigger: GAGTGCGGGACACCGAGGTCAGGTCTCGGAAAGGGA...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR TCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTAGAAGGCCCTCAGGCTaGGGGCCAGCACCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPRRPSG*GPAPLL
Trigger: TAGGAGAGGTGCTGGCCCTCAGCCTGAGGGCCTTCT...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAAGAAGGCCCTCAGGCTaGGGGCCAGCACCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLRRPSG*GPAPLL
Trigger: TAGGAGAGGTGCTGGCCCTCAGCCTGAGGGCCTTCT...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp GATGTTCTTATAGATGAACTGGCGAAGGTTCCTCTTGCGTTCCACAGGGCTGGCAGAAGGCCCTCAGGCTaGGGGCCAGCACCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: DVLIDELAKVPLAFHRAGRRPSG*GPAPLL
Trigger: TAGGAGAGGTGCTGGCCCTCAGCCTGAGGGCCTTCT...GCCAGCCCTGTGGAACGCAAGAGGAACCTTCGCCAGTTCATCTATAAGAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR TCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTCCACGCCGTGCTCCATaGGCTCTGAGAAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTPRRAP*ALRRPS
Trigger: TGAGGGCCTTCTCAGAGCTCATGGAGCACGGCGTGG...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCACGCCGTGCTCCATaGGCTCTGAGAAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLPRRAP*ALRRPS
Trigger: TGAGGGCCTTCTCAGAGCTCATGGAGCACGGCGTGG...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCACGCCGTGCTCCATaGGCTCTGAGAAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPPRRAP*ALRRPS
Trigger: TGAGGGCCTTCTCAGAGCTCATGGAGCACGGCGTGG...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp GCACAGGATGCTGCCATTCTTGATCTCCGCGCGGTTATTCTCGGTGATGTATCTCCACGCCGTGCTCCATaGGCTCTGAGAAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: AQDAAILDLRAVILGDVSPRRAP*ALRRPS
Trigger: TGAGGGCCTTCTCAGAGCTCATGGAGCACGGCGTGG...AGATACATCACCGAGAATAACCGCGCGGAGATCAAGAATGGCAGCATCCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR TCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGCACGGAGGCATCCATaGGGTTCATGTTCACGTAGC +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAARRHP*GSCSRS
Trigger: GCTACGTGAACATGAACCTCATGGATGCCTCCGTGC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp GATCTCCGCGCGGTTATTCTCGGTGATGTATCTCCGGTGCCCATCCGCAAACTGGCACGGAGGCATCCATaGGGTTCATGTTCACGTAGC +
Preference number: 4 (lower is better)
Translates to: DLRAVILGDVSPVPIRKLARRHP*GSCSRS
Trigger: GCTACGTGAACATGAACCTCATGGATGCCTCCGTGC...CAGTTTGCGGATGGGCACCGGAGATACATCACCGAGAATAACCGCGCGGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR TCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGGCGGATCAGGCCCATaGGCTCTGGCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLGGSGP*ALASAS
Trigger: AGAAGCTGAAGCCAGAGCTCATGGGCCTGATCCGCC...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCTGCCCAGCAAGGCACTaGGCCCATCTGTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPCPARH*AHLSTG
Trigger: ACCTGTGGACAGATGGGCTCAGTGCCTTGCTGGGCA...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCTGCTGCTCCTGGCCATaGAACGCGGCCTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTCCSWP*NAAFPR
Trigger: CCTTGGGAAGGCCGCGTTGCATGGCCAGGAGCAGCA...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTTGCTGCTCCTGGCCATaGAACGCGGCCTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPCCSWP*NAAFPR
Trigger: CCTTGGGAAGGCCGCGTTGCATGGCCAGGAGCAGCA...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTTGCTGCTCCTGGCCATaGAACGCGGCCTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSCCSWP*NAAFPR
Trigger: CCTTGGGAAGGCCGCGTTGCATGGCCAGGAGCAGCA...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTACTCGCGGCCCAGACTaGTGCTCCTGGCCATGCAAC +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTTRGPD*CSWPCN
Trigger: GTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCGAGT...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACTCGCGGCCCAGACTaGTGCTCCTGGCCATGCAAC +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSTRGPD*CSWPCN
Trigger: GTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCGAGT...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp GTGGATGATGTTCTTATAGATGAACTGGCGAAGGTTCCTCTTGCGTTCCACAGGCGGAGACCGTGCACCTaGGGCCAAGGGTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: VDDVLIDELAKVPLAFHRRRPCT*GQGCTW
Trigger: CCAGGTGCACCCTTGGCCGCAGGTGCACGGTCTCCG...CCTGTGGAACGCAAGAGGAACCTTCGCCAGTTCATCTATAAGAACATCATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAACTTTCCGGAGACCGTaGACCTGCGGCCAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLTFRRP*TCGQGC
Trigger: GCACCCTTGGCCGCAGGTGCACGGTCTCCGGAAAGT...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACTTTCCGGAGACCGTaGACCTGCGGCCAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSTFRRP*TCGQGC
Trigger: GCACCCTTGGCCGCAGGTGCACGGTCTCCGGAAAGT...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp GATCTCCGCGCGGTTATTCTCGGTGATGTATCTCCGGTGCCCATCCGCAAACTGGTGATGTATCTCCGGTaGCCATCCGCAAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: DLRAVILGDVSPVPIRKLVMYLR*PSANCR
Trigger: CCTGCAGTTTGCGGATGGGCACCGGAGATACATCAC...CAGTTTGCGGATGGGCACCGGAGATACATCACCGAGAATAACCGCGCGGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCTCAGGACTGTTACTCTaGAGCCCACCCAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTASGLLL*SPPKSC
Trigger: GCAGCTCTTGGGTGGGCTGCAGAGTAACAGTCCTGA...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAGGCCCAGGGCTGGGCTaGTCAAGGTCACACTCTCCA +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLGPGLG*SRSHSP
Trigger: TGGAGAGTGTGACCTTGAGCAGCCCAGCCCTGGGCC...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGCCCAGGGCTGGGCTaGTCAAGGTCACACTCTCCA +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTGPGLG*SRSHSP
Trigger: TGGAGAGTGTGACCTTGAGCAGCCCAGCCCTGGGCC...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGCTTGTCCTCGCGGCTaGTGTTCTCCAACACAAACC +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAACPRG*CSPTQT
Trigger: GGTTTGTGTTGGAGAACAGCAGCCGCGAGGACAAGC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCGCAAAGGGGCACTCGTaGTTGTCCTCGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTAKGHS*LSSRLL
Trigger: CAGCAGCCGCGAGGACAAGCACGAGTGCCCCTTTGC...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCGCAAAGGGGCACTCGTaGTTGTCCTCGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLAKGHS*LSSRLL
Trigger: CAGCAGCCGCGAGGACAAGCACGAGTGCCCCTTTGC...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAGCAAAGGGGCACTCGTaGTTGTCCTCGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLAKGHS*LSSRLL
Trigger: CAGCAGCCGCGAGGACAAGCACGAGTGCCCCTTTGC...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTAGTGTGCCCTCCTGGTaGAGCCGTTCAGTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTSVPSW*SRSVCR
Trigger: GCGGCAGACTGAACGGCTGCACCAGGAGGGCACACT...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACAGTGTGCCCTCCTGGTaGAGCCGTTCAGTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYSVPSW*SRSVCR
Trigger: GCGGCAGACTGAACGGCTGCACCAGGAGGGCACACT...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCCTTGCCTGTCAGGAGTaGCCTCATGTCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSLACQE*PHVGHR
Trigger: CCTGTGGCCGACATGAGGGCACTCCTGACAGGCAAG...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCATGGGGGCAGTCCTTaGCTGTCAGGAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPHGGSP*LSGVPS
Trigger: TGAGGGCACTCCTGACAGGCAAGGACTGCCCCCATG...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAGGTCCAGCCGTGTCTaGTCGCTGCCCATGGGACTG +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSRSSRV*SLPMGL
Trigger: CAGTCCCATGGGCAGCGAGCAGACACGGCTGGACCT...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTAGGTCCAGCCGTGTCTaGTCGCTGCCCATGGGACTG +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTRSSRV*SLPMGL
Trigger: CAGTCCCATGGGCAGCGAGCAGACACGGCTGGACCT...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCTTCATGGCTaGTGCAGTGGCCGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPTALHG*CSGRSC
Trigger: ACAGCTGCGGCCACTGCAGCAGCCATGAAGGGCAGT...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCACTGCCCTTCATGGCTaGTGCAGTGGCCGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSTALHG*CSGRSC
Trigger: ACAGCTGCGGCCACTGCAGCAGCCATGAAGGGCAGT...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCTGGTCAGGGTGCCTaGACTCCTCTACCCACTGCC +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTAGQGA*TPLPTA
Trigger: GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGC...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCAGACTGCTGCTCCTaGCCATGCAACGCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTPDCCS*PCNAAF
Trigger: GAAGGCCGCGTTGCATGGCCAGGAGCAGCAGTCTGG...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CCA 90 bp GTGGATGATGTTCTTATAGATGAACTGGCGAAGGTTCCTCTTGCGTTCCACAGGGCGCCATGGTCCAGCTaGGACGTGGGCGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: VDDVLIDELAKVPLAFHRAPWSS*DVGACT
Trigger: AGTGCAGGCGCCCACGTCCCAGCTGGACCATGGCGC...CCTGTGGAACGCAAGAGGAACCTTCGCCAGTTCATCTATAAGAACATCATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR CCA 90 bp GATGTTCTTATAGATGAACTGGCGAAGGTTCCTCTTGCGTTCCACAGGGCTGGCTTCGCCTGGTCCAGCTaGATGAGCTGCGGGATGGCG +
Preference number: 4 (lower is better)
Translates to: DVLIDELAKVPLAFHRAGFAWSS*MSCGMA
Trigger: CGCCATCCCGCAGCTCATCCAGCTGGACCAGGCGAA...GCCAGCCCTGTGGAACGCAAGAGGAACCTTCGCCAGTTCATCTATAAGAACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR CCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTACCTCGAAGGCAGCCTaGCGTAGGACCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTTSKAA*RRTCSC
Trigger: GCAGCTGCAGGTCCTACGCCAGGCTGCCTTCGAGGT...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAACCTCGAAGGCAGCCTaGCGTAGGACCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLTSKAA*RRTCSC
Trigger: GCAGCTGCAGGTCCTACGCCAGGCTGCCTTCGAGGT...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACCGGCTGTACGCGCTaGGCGCGTTTCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPTGCTR*ARFWRS
Trigger: ACTTCTCCAGAAACGCGCCCAGCGCGTACAGCCGGT...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCAGCAGCACCGTCAGCTaGATGCTGCCCCGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLSSTVS*MLPRAK
Trigger: CTTTGCCCGGGGCAGCATCCAGCTGACGGTGCTGCT...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAAGCAGCACCGTCAGCTaGATGCTGCCCCGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLSSTVS*MLPRAK
Trigger: CTTTGCCCGGGGCAGCATCCAGCTGACGGTGCTGCT...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCAGCAGCACCGTCAGCTaGATGCTGCCCCGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTSSTVS*MLPRAK
Trigger: CTTTGCCCGGGGCAGCATCCAGCTGACGGTGCTGCT...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCTTGGCCGAAGAACATaGGTGAGAAGTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTALGRRT*VRSPGL
Trigger: CAGCCCAGGACTTCTCACCCATGTTCTTCGGCCAAG...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCAACCACAGCTTATCCTaGCGCCGCCGGCTGCTGATC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSNHSLS*RRRLLI
Trigger: GATCAGCAGCCGGCGGCGCCAGGATAAGCTGTGGTT...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCCTTCTCCCGGACATaGGGGCAGTCCTTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTPFSRT*GQSLPV
Trigger: GACAGGCAAGGACTGCCCCCATGTCCGGGAGAAGGG...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTTCTGCTCGCTGCCCATaGGACTGCCCAGCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSSARCP*DCPARH
Trigger: GTGCCTTGCTGGGCAGTCCCATGGGCAGCGAGCAGA...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTCTGCTCGCTGCCCATaGGACTGCCCAGCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLSARCP*DCPARH
Trigger: GTGCCTTGCTGGGCAGTCCCATGGGCAGCGAGCAGA...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTCTCAGCCTCAAGGTCTaGGGCCGTGCTGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTLSLKV*GRAEAQ
Trigger: CTGTGCCTCAGCACGGCCCCAGACCTTGAGGCTGAG...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTCTCAGCCTCAAGGTCTaGGGCCGTGCTGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSLSLKV*GRAEAQ
Trigger: CTGTGCCTCAGCACGGCCCCAGACCTTGAGGCTGAG...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCGCCTGCAAGTGGAGTaGTCATTCTCGCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPRLQVE*SFSRPG
Trigger: CCCAGGCCGCGAGAATGACCACTCCACTTGCAGGCG...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477898.5
CDS-3UTR CCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGGCTTCGCCTGCAAGTaGAGTGGTCATTCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLGFACK*SGHSRG
Trigger: GCCGCGAGAATGACCACTCCACTTGCAGGCGAAGCC...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477898.5
CDS-3UTR CCA 90 bp GATGTTCTTATAGATGAACTGGCGAAGGTTCCTCTTGCGTTCCACAGGGCTGGCAGCACCTCTCCTAGGTaGGGCCGTGCTGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: DVLIDELAKVPLAFHRAGSTSPR*GRAEAQ
Trigger: CTGTGCCTCAGCACGGCCCCACCTAGGAGAGGTGCT...GCCAGCCCTGTGGAACGCAAGAGGAACCTTCGCCAGTTCATCTATAAGAACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR TCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGCCCAGCAAGGCACTaGGCCCATCTGTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLCPARH*AHLSTG
Trigger: ACCTGTGGACAGATGGGCTCAGTGCCTTGCTGGGCA...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGCGGTTATTCTCGGTaGTGTATCTCCGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCRGYSR*CISGAH
Trigger: ATGGGCACCGGAGATACATCACCGAGAATAACCGCG...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTTCCAGCTGGATGAGCTaGGGGATGGCGTCACGCATC +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPSSWMS*GMASRI
Trigger: GATGCGTGACGCCATCCCGCAGCTCATCCAGCTGGA...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTTCCAGCTGGATGAGCTaGGGGATGGCGTCACGCATC +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSSSWMS*GMASRI
Trigger: GATGCGTGACGCCATCCCGCAGCTCATCCAGCTGGA...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCAGCCCACCCAAGAGCTaGTCAGCCTCAAGGTCATTC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCSPPKS*SASRSF
Trigger: GAATGACCTTGAGGCTGAGCAGCTCTTGGGTGGGCT...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360833.6
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCAGGACACCACGCCGTaGTCCATGAGCTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPQDTTP*SMSSEK
Trigger: CTTCTCAGAGCTCATGGAGCACGGCGTGGTGTCCTG...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCAGGACACCACGCCGTaGTCCATGAGCTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLQDTTP*SMSSEK
Trigger: CTTCTCAGAGCTCATGGAGCACGGCGTGGTGTCCTG...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CGTGCTGAGGCACAGGATGCTGCCATTCTTGATCTCCGCGCGGTTATTCTCGGTTCCTCACAAAGGGGATaGTCAGAGTCTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: RAEAQDAAILDLRAVILGSSQRG*SESPRT
Trigger: TGTCCTGGGAGACTCTGAGCATCCCCTTTGTGAGGA...ACCGAGAATAACCGCGCGGAGATCAAGAATGGCAGCATCCTGTGCCTCAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp CGTGCTGAGGCACAGGATGCTGCCATTCTTGATCTCCGCGCGGTTATTCTCGGTTTCATCACCTGTAGGTaGACCAGCAGCCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: RAEAQDAAILDLRAVILGFITCR*TSSLSR
Trigger: CCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAA...ACCGAGAATAACCGCGCGGAGATCAAGAATGGCAGCATCCTGTGCCTCAGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCGCCATGGCCTTGGTTTaGAGCTGCTGGTTCATCACC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCAMALV*SCWFIT
Trigger: GGTGATGAACCAGCAGCTGCAAACCAAGGCCATGGC...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CCATTCTTGATCTCCGCGCGGTTATTCTCGGTGATGTATCTCCGGTGCCCATCCGCCATGGCCTTGGTTTaGAGCTGCTGGTTCATCACC +
Preference number: 4 (lower is better)
Translates to: PFLISARLFSVMYLRCPSAMALV*SCWFIT
Trigger: GGTGATGAACCAGCAGCTGCAAACCAAGGCCATGGC...GGATGGGCACCGGAGATACATCACCGAGAATAACCGCGCGGAGATCAAGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTCTTGCCTGTCAGGAGTaGCCTCATGTCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSLACQE*PHVGHR
Trigger: CCTGTGGCCGACATGAGGGCACTCCTGACAGGCAAG...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTCATGGGGGCAGTCCTTaGCTGTCAGGAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTHGGSP*LSGVPS
Trigger: TGAGGGCACTCCTGACAGGCAAGGACTGCCCCCATG...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCATGGGGGCAGTCCTTaGCTGTCAGGAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTHGGSP*LSGVPS
Trigger: TGAGGGCACTCCTGACAGGCAAGGACTGCCCCCATG...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCATGGGGGCAGTCCTTaGCTGTCAGGAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPHGGSP*LSGVPS
Trigger: TGAGGGCACTCCTGACAGGCAAGGACTGCCCCCATG...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCTCTGCTGGTCAGGGTaGCTGCACTCCTCTACCCAC +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYLCWSG*LHSSTH
Trigger: GTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAG...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTCTCTGCTGGTCAGGGTaGCTGCACTCCTCTACCCAC +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSLCWSG*LHSSTH
Trigger: GTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAG...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCTTCTGCAGCAATCTCTaGTGGTCAGGGTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCFCSNL*WSGCLH
Trigger: GTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAA...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTAGCCCACCCAAGAGCTaGTCAGCCTCAAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPSPPKS*SASRSG
Trigger: CCCAGACCTTGAGGCTGAGCAGCTCTTGGGTGGGCT...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCGCCAGGGGCTTCGCCTaGAAGTGGAGTGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPARGFA*KWSGHS
Trigger: AGAATGACCACTCCACTTGCAGGCGAAGCCCCTGGC...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477898.5
CDS-3UTR CCA 90 bp GTGGATGATGTTCTTATAGATGAACTGGCGAAGGTTCCTCTTGCGTTCCACAGGGCCAGGGGCTTCGCCTaGTCCAGCTGGATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VDDVLIDELAKVPLAFHRARGFA*SSWMSC
Trigger: GCAGCTCATCCAGCTGGACCAGGCGAAGCCCCTGGC...CCTGTGGAACGCAAGAGGAACCTTCGCCAGTTCATCTATAAGAACATCATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGCAGGGCCATGGCCTTaGTTTGCAGCTGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSAGPWP*FAAAGS
Trigger: TGAACCAGCAGCTGCAAACCAAGGCCATGGCCCTGC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCTGTCAGCAGGGCCATaGCCTTGGTTTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPLSAGP*PWFAAA
Trigger: AGCAGCTGCAAACCAAGGCCATGGCCCTGCTGACAG...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCATCTCGTCGCCCATTaGTGCTGCACTGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAHLVAH*CCTVDD
Trigger: ATCATCCACAGTGCAGCACCAATGGGCGACGAGATG...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACACCGGCTGTACGCGCTaGGCGCGTTTCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYTGCTR*ARFWRS
Trigger: ACTTCTCCAGAAACGCGCCCAGCGCGTACAGCCGGT...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCATGGGTGAGAAGTCCTaGGCTGTCTCAGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSMGEKS*AVSEQG
Trigger: GCCCTGCTCTGAGACAGCCCAGGACTTCTCACCCAT...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCATGGGTGAGAAGTCCTaGGCTGTCTCAGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPMGEKS*AVSEQG
Trigger: GCCCTGCTCTGAGACAGCCCAGGACTTCTCACCCAT...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCTTGGCCGAAGAACATaGGTGAGAAGTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCLGRRT*VRSPGL
Trigger: CAGCCCAGGACTTCTCACCCATGTTCTTCGGCCAAG...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCAACCACAGCTTATCCTaGCGCCGCCGGCTGCTGATC +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTNHSLS*RRRLLI
Trigger: GATCAGCAGCCGGCGGCGCCAGGATAAGCTGTGGTT...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGCAGCTTGGTCTCCATaGTCAGCAGCTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSAAWSP*SAAAPG
Trigger: ACCTGGAGCAGCTGCTGACCATGGAGACCAAGCTGC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCCAGCAGACGCAGCTTaGTCTCCATGGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPPADAA*SPWSAA
Trigger: AGCTGCTGACCATGGAGACCAAGCTGCGTCTGCTGG...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTGCAGCAATCTCTGCTaGTCAGGGTGCCTGCACTCC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSCSNLC*SGCLHS
Trigger: GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCA...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGCACCTCCCCATAAGTaGGCGCATTCACCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSAPPHK*AHSPWF
Trigger: GAACCAAGGTGAATGCGCTCACTTATGGGGAGGTGC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGTGATGTATCTCCGGTaGCCATCCGCAAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLVMYLR*PSANCR
Trigger: CCTGCAGTTTGCGGATGGGCACCGGAGATACATCAC...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCAGGACTGTTACTCTaGAGCCCACCCAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSSGLLL*SPPKSC
Trigger: GCAGCTCTTGGGTGGGCTGCAGAGTAACAGTCCTGA...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTCAGGACACCACGCCGTaGTCCATGAGCTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSQDTTP*SMSSEK
Trigger: CTTCTCAGAGCTCATGGAGCACGGCGTGGTGTCCTG...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGCCATGGCCTTGGTTTaGAGCTGCTGGTTCATCACC +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLAMALV*SCWFIT
Trigger: GGTGATGAACCAGCAGCTGCAAACCAAGGCCATGGC...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCGCCATGGCCTTGGTTTaGAGCTGCTGGTTCATCACC +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPAMALV*SCWFIT
Trigger: GGTGATGAACCAGCAGCTGCAAACCAAGGCCATGGC...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCTGCTCCCGCACCACCTaGATGACCTTGTCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTCSRTT*MTLSKS
Trigger: GGACTTCGACAAGGTCATGCAGGTGGTGCGGGAGCA...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGCTCCCGCACCACCTaGATGACCTTGTCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLCSRTT*MTLSKS
Trigger: GGACTTCGACAAGGTCATGCAGGTGGTGCGGGAGCA...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTTGCTCCCGCACCACCTaGATGACCTTGTCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPCSRTT*MTLSKS
Trigger: GGACTTCGACAAGGTCATGCAGGTGGTGCGGGAGCA...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCTCCATGTCTCCGTACTaGAGCAGCTTGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPSMSPY*SSLWLG
Trigger: CCCCAACCACAAGCTGCTGCAGTACGGAGACATGGA...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACACTCCTCTACCCACTaGCCTTCATGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLHSSTH*PSWLLQ
Trigger: CTGCAGCAGCCATGAAGGGCAGTGGGTAGAGGAGTG...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTTCTGCAGCAATCTCTaGTGGTCAGGGTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSFCSNL*WSGCLH
Trigger: GTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAA...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCTTCTGCAGCAATCTCTaGTGGTCAGGGTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPFCSNL*WSGCLH
Trigger: GTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAA...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAGCAGGGCCATGGCCTTaGTTTGCAGCTGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLAGPWP*FAAAGS
Trigger: TGAACCAGCAGCTGCAAACCAAGGCCATGGCCCTGC...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCGCAGGGCCATGGCCTTaGTTTGCAGCTGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTAGPWP*FAAAGS
Trigger: TGAACCAGCAGCTGCAAACCAAGGCCATGGCCCTGC...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCAGGGCCATGGCCTTaGTTTGCAGCTGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTAGPWP*FAAAGS
Trigger: TGAACCAGCAGCTGCAAACCAAGGCCATGGCCCTGC...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCTGTCAGCAGGGCCATaGCCTTGGTTTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYLSAGP*PWFAAA
Trigger: AGCAGCTGCAAACCAAGGCCATGGCCCTGCTGACAG...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GCACAGGATGCTGCCATTCTTGATCTCCGCGCGGTTATTCTCGGTGATGTATCTCTGTCAGCAGGGCCATaGCCTTGGTTTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AQDAAILDLRAVILGDVSLSAGP*PWFAAA
Trigger: AGCAGCTGCAAACCAAGGCCATGGCCCTGCTGACAG...AGATACATCACCGAGAATAACCGCGCGGAGATCAAGAATGGCAGCATCCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCTGTCAGCAGGGCCATaGCCTTGGTTTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLLSAGP*PWFAAA
Trigger: AGCAGCTGCAAACCAAGGCCATGGCCCTGCTGACAG...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCTCCAGGTCCTGTGCTaGGTTGCTGTTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCLQVLC*VAVRKA
Trigger: GGCTTTTCTAACAGCAACCCAGCACAGGACCTGGAG...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCATGGGTGAGAAGTCCTaGGCTGTCTCAGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTMGEKS*AVSEQG
Trigger: GCCCTGCTCTGAGACAGCCCAGGACTTCTCACCCAT...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCCTTGGCCGAAGAACATaGGTGAGAAGTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSLGRRT*VRSPGL
Trigger: CAGCCCAGGACTTCTCACCCATGTTCTTCGGCCAAG...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCTGGAAGCTCTGGTCTTaGCCGAAGAACATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCWKLWS*PKNMGE
Trigger: CTCACCCATGTTCTTCGGCCAAGACCAGAGCTTCCA...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACACAGAAGAGCTCGTaGAAGCTCTGGTCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPTQKSS*KLWSWP
Trigger: CGGCCAAGACCAGAGCTTCCACGAGCTCTTCTGTGT...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGACACAGAAGAGCTCGTaGAAGCTCTGGTCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLTQKSS*KLWSWP
Trigger: CGGCCAAGACCAGAGCTTCCACGAGCTCTTCTGTGT...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTTACTGCAGCAGCTTGTaGTTGGGGGACAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPYCSSL*LGDRQQ
Trigger: CTGCTGCCTGTCCCCCAACCACAAGCTGCTGCAGTA...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACTGCAGCAGCTTGTaGTTGGGGGACAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLYCSSL*LGDRQQ
Trigger: CTGCTGCCTGTCCCCCAACCACAAGCTGCTGCAGTA...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACTACTGCAGCAGCTTGTaGTTGGGGGACAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYYCSSL*LGDRQQ
Trigger: CTGCTGCCTGTCCCCCAACCACAAGCTGCTGCAGTA...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCTACTGCAGCAGCTTGTaGTTGGGGGACAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTYCSSL*LGDRQQ
Trigger: CTGCTGCCTGTCCCCCAACCACAAGCTGCTGCAGTA...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGCAGCTTGGTCTCCATaGTCAGCAGCTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSAAWSP*SAAAPG
Trigger: ACCTGGAGCAGCTGCTGACCATGGAGACCAAGCTGC...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACGCAGCTTGGTCTCCATaGTCAGCAGCTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYAAWSP*SAAAPG
Trigger: ACCTGGAGCAGCTGCTGACCATGGAGACCAAGCTGC...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCGCAGCTTGGTCTCCATaGTCAGCAGCTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLAAWSP*SAAAPG
Trigger: ACCTGGAGCAGCTGCTGACCATGGAGACCAAGCTGC...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCCAGCAGACGCAGCTTaGTCTCCATGGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLPADAA*SPWSAA
Trigger: AGCTGCTGACCATGGAGACCAAGCTGCGTCTGCTGG...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGCAGCAATCTCTGCTaGTCAGGGTGCCTGCACTCC +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLCSNLC*SGCLHS
Trigger: GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCA...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTTGCAGCAATCTCTGCTaGTCAGGGTGCCTGCACTCC +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPCSNLC*SGCLHS
Trigger: GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCA...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCTGCAGCAATCTCTGCTaGTCAGGGTGCCTGCACTCC +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTCSNLC*SGCLHS
Trigger: GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCA...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCAAGGTCATTCTCGGTaGTGTATCTCCGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPQGHSR*CISGAH
Trigger: ATGGGCACCGGAGATACATCACCGAGAATGACCTTG...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360833.6
CDS-3UTR TCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCGCACGGAGGCATCCATaGGGTTCATGTTCACGTAGC +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLARRHP*GSCSRS
Trigger: GCTACGTGAACATGAACCTCATGGATGCCTCCGTGC...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTGCACCTCCCCATAAGTaGGCGCATTCACCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPAPPHK*AHSPWF
Trigger: GAACCAAGGTGAATGCGCTCACTTATGGGGAGGTGC...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGCACCTCCCCATAAGTaGGCGCATTCACCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSAPPHK*AHSPWF
Trigger: GAACCAAGGTGAATGCGCTCACTTATGGGGAGGTGC...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCCCCCACGGTCATAGCTaGTTGAGAAGGCCAACTCAT +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSPHGHS*LRRPTH
Trigger: ATGAGTTGGCCTTCTCAATCAGCTATGACCGTGGGG...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCCCCACGGTCATAGCTaGTTGAGAAGGCCAACTCAT +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPPHGHS*LRRPTH
Trigger: ATGAGTTGGCCTTCTCAATCAGCTATGACCGTGGGG...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTCGCGGTTATTCTCGGTaGTGTATCTCCGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTRGYSR*CISGAH
Trigger: ATGGGCACCGGAGATACATCACCGAGAATAACCGCG...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCGCGGTTATTCTCGGTaGTGTATCTCCGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLRGYSR*CISGAH
Trigger: ATGGGCACCGGAGATACATCACCGAGAATAACCGCG...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCGTGATGTATCTCCGGTaGCCATCCGCAAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTVMYLR*PSANCR
Trigger: CCTGCAGTTTGCGGATGGGCACCGGAGATACATCAC...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGTGATGTATCTCCGGTaGCCATCCGCAAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSVMYLR*PSANCR
Trigger: CCTGCAGTTTGCGGATGGGCACCGGAGATACATCAC...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTGTGATGTATCTCCGGTaGCCATCCGCAAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPVMYLR*PSANCR
Trigger: CCTGCAGTTTGCGGATGGGCACCGGAGATACATCAC...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTATCAGGACTGTTACTCTaGAGCCCACCCAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLSGLLL*SPPKSC
Trigger: GCAGCTCTTGGGTGGGCTGCAGAGTAACAGTCCTGA...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTTCAGGACTGTTACTCTaGAGCCCACCCAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTSGLLL*SPPKSC
Trigger: GCAGCTCTTGGGTGGGCTGCAGAGTAACAGTCCTGA...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCTCACAAAGGGGATaGTCAGAGTCTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSSSQRG*SESPRT
Trigger: TGTCCTGGGAGACTCTGAGCATCCCCTTTGTGAGGA...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCGTCGCCCATTGGTGCTaGACTGTGGATGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCVAHWC*TVDDVL
Trigger: AAGAACATCATCCACAGTGCAGCACCAATGGGCGAC...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCTCGTCGCCCATTGGTaGTGCACTGTGGATGATGTT +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPLVAHW*CTVDDV
Trigger: AACATCATCCACAGTGCAGCACCAATGGGCGACGAG...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACGCTTGTCCTCGCGGCTaGTGTTCTCCAACACAAACC +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYACPRG*CSPTQT
Trigger: GGTTTGTGTTGGAGAACAGCAGCCGCGAGGACAAGC...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCGCTTGTCCTCGCGGCTaGTGTTCTCCAACACAAACC +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTACPRG*CSPTQT
Trigger: GGTTTGTGTTGGAGAACAGCAGCCGCGAGGACAAGC...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTATCCATGTCTCCGTACTaGAGCAGCTTGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLSMSPY*SSLWLG
Trigger: CCCCAACCACAAGCTGCTGCAGTACGGAGACATGGA...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACTCCATGTCTCCGTACTaGAGCAGCTTGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYSMSPY*SSLWLG
Trigger: CCCCAACCACAAGCTGCTGCAGTACGGAGACATGGA...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGTCAAGGTTCAGCGATaGTGCAGTCATAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTAVKVQR*CSHSRS
Trigger: ACTTCTGCTATGACTGCAGCATCGCTGAACCTTGAC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCTTCTGCAGCAATCTCTaGTGGTCAGGGTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTFCSNL*WSGCLH
Trigger: GTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAA...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCTTGGTTTGCAGCTGCTaGTTCATCACCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCLVCSC*FITCRC
Trigger: GCACCTACAGGTGATGAACCAGCAGCTGCAAACCAA...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCTTGGCCGAAGAACATaGGTGAGAAGTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLLGRRT*VRSPGL
Trigger: CAGCCCAGGACTTCTCACCCATGTTCTTCGGCCAAG...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTGGAAGCTCTGGTCTTaGCCGAAGAACATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSWKLWS*PKNMGE
Trigger: CTCACCCATGTTCTTCGGCCAAGACCAGAGCTTCCA...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACACAGAAGAGCTCGTaGAAGCTCTGGTCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSTQKSS*KLWSWP
Trigger: CGGCCAAGACCAGAGCTTCCACGAGCTCTTCTGTGT...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTACACAGAAGAGCTCGTaGAAGCTCTGGTCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPTQKSS*KLWSWP
Trigger: CGGCCAAGACCAGAGCTTCCACGAGCTCTTCTGTGT...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTTGGCGTCACGCATCTTaGTGGCAATCTTCACCACGT +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPWRHAS*WQSSPR
Trigger: ACGTGGTGAAGATTGCCATCAAGATGCGTGACGCCA...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR TCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCGTCCCCATCTTCAATaGTGGTGCCTAGTATCTGGA +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPRPHLQ*WCLVSG
Trigger: TCCAGATACTAGGCACCATCATTGAAGATGGGGACG...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCCGTCCCCATCTTCAATaGTGGTGCCTAGTATCTGGA +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSRPHLQ*WCLVSG
Trigger: TCCAGATACTAGGCACCATCATTGAAGATGGGGACG...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCACGGTCATAGCTGATTaGGAAGGCCAACTCATAGAG +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCTVIAD*EGQLIE
Trigger: CTCTATGAGTTGGCCTTCTCAATCAGCTATGACCGT...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCCCACGGTCATAGCTaGTTGAGAAGGCCAACTCAT +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPPHGHS*LRRPTH
Trigger: ATGAGTTGGCCTTCTCAATCAGCTATGACCGTGGGG...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCCCACGGTCATAGCTaGTTGAGAAGGCCAACTCAT +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTPHGHS*LRRPTH
Trigger: ATGAGTTGGCCTTCTCAATCAGCTATGACCGTGGGG...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGGATGCTGCCATTCTTaGTCTCCGCGCGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSGCCHS*SPRGYS
Trigger: AGAATAACCGCGCGGAGATCAAGAATGGCAGCATCC...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGATGCTGCCATTCTTaGTCTCCGCGCGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTGCCHS*SPRGYS
Trigger: AGAATAACCGCGCGGAGATCAAGAATGGCAGCATCC...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACGGATGCTGCCATTCTTaGTCTCCGCGCGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYGCCHS*SPRGYS
Trigger: AGAATAACCGCGCGGAGATCAAGAATGGCAGCATCC...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTTCCTCACAAAGGGGATaGTCAGAGTCTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTSSQRG*SESPRT
Trigger: TGTCCTGGGAGACTCTGAGCATCCCCTTTGTGAGGA...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTTCCTCACAAAGGGGATaGTCAGAGTCTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSSSQRG*SESPRT
Trigger: TGTCCTGGGAGACTCTGAGCATCCCCTTTGTGAGGA...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTCCTCACAAAGGGGATaGTCAGAGTCTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLSSQRG*SESPRT
Trigger: TGTCCTGGGAGACTCTGAGCATCCCCTTTGTGAGGA...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTTTCATCACCTGTAGGTaGACCAGCAGCCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTFITCR*TSSLSR
Trigger: CCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAA...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTTCATCACCTGTAGGTaGACCAGCAGCCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLFITCR*TSSLSR
Trigger: CCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAA...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCTTCATCACCTGTAGGTaGACCAGCAGCCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTFITCR*TSSLSR
Trigger: CCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAA...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCGTCGCCCATTGGTGCTaGACTGTGGATGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPVAHWC*TVDDVL
Trigger: AAGAACATCATCCACAGTGCAGCACCAATGGGCGAC...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTCGTCGCCCATTGGTaGTGCACTGTGGATGATGTT +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPLVAHW*CTVDDV
Trigger: AACATCATCCACAGTGCAGCACCAATGGGCGACGAG...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCTCGTCGCCCATTGGTaGTGCACTGTGGATGATGTT +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYLVAHW*CTVDDV
Trigger: AACATCATCCACAGTGCAGCACCAATGGGCGACGAG...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCTCGTCGCCCATTGGTaGTGCACTGTGGATGATGTT +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLLVAHW*CTVDDV
Trigger: AACATCATCCACAGTGCAGCACCAATGGGCGACGAG...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCTATTCAACAGCTGGATaGCCACACAGAAGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCYSTAG*PHRRAR
Trigger: ACGAGCTCTTCTGTGTGGGCATCCAGCTGTTGAATA...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCATGGTGCCTAGTATCTaGAGCCCATTACGGCTGATG +
Preference number: 4 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSMVPSI*SPLRLM
Trigger: CATCAGCCGTAATGGGCTCCAGATACTAGGCACCAT...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGTTGGTTTGCAGCTGCTaGTTCATCACCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLLVCSC*FITCRC
Trigger: GCACCTACAGGTGATGAACCAGCAGCTGCAAACCAA...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCTTGGTTTGCAGCTGCTaGTTCATCACCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPLVCSC*FITCRC
Trigger: GCACCTACAGGTGATGAACCAGCAGCTGCAAACCAA...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GTGGATGATGTTCTTATAGATGAACTGGCGAAGGTTCCTCTTGCGTTCCACAGGGCAGGGCCATGGCCTTaGTTTGCAGCTGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: VDDVLIDELAKVPLAFHRAGPWP*FAAAGS
Trigger: TGAACCAGCAGCTGCAAACCAAGGCCATGGCCCTGC...CCTGTGGAACGCAAGAGGAACCTTCGCCAGTTCATCTATAAGAACATCATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR CCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTCATCTCGTCGCCCATTaGTGCTGCACTGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTHLVAH*CCTVDD
Trigger: ATCATCCACAGTGCAGCACCAATGGGCGACGAGATG...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCATCTCGTCGCCCATTaGTGCTGCACTGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPHLVAH*CCTVDD
Trigger: ATCATCCACAGTGCAGCACCAATGGGCGACGAGATG...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACTCCAGGTCCTGTGCTaGGTTGCTGTTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLLQVLC*VAVRKA
Trigger: GGCTTTTCTAACAGCAACCCAGCACAGGACCTGGAG...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCTCCAGGTCCTGTGCTaGGTTGCTGTTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLLQVLC*VAVRKA
Trigger: GGCTTTTCTAACAGCAACCCAGCACAGGACCTGGAG...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCGCTGGGCGCGTTTCTaGAGAAGTACAACATGTTGT +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLRWARF*RSTTCC
Trigger: ACAACATGTTGTACTTCTCCAGAAACGCGCCCAGCG...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTATGGAAGCTCTGGTCTTaGCCGAAGAACATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLWKLWS*PKNMGE
Trigger: CTCACCCATGTTCTTCGGCCAAGACCAGAGCTTCCA...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTGGAAGCTCTGGTCTTaGCCGAAGAACATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLWKLWS*PKNMGE
Trigger: CTCACCCATGTTCTTCGGCCAAGACCAGAGCTTCCA...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTAGCTCGTGGAAGCTCTaGTCTTGGCCGAAGAACATG +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTSSWKL*SWPKNM
Trigger: CATGTTCTTCGGCCAAGACCAGAGCTTCCACGAGCT...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTAGCTCGTGGAAGCTCTaGTCTTGGCCGAAGAACATG +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPSSWKL*SWPKNM
Trigger: CATGTTCTTCGGCCAAGACCAGAGCTTCCACGAGCT...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCAGCTCGTGGAAGCTCTaGTCTTGGCCGAAGAACATG +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTSSWKL*SWPKNM
Trigger: CATGTTCTTCGGCCAAGACCAGAGCTTCCACGAGCT...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACGTCCCCATCTTCAATaGTGGTGCCTAGTATCTGGA +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLRPHLQ*WCLVSG
Trigger: TCCAGATACTAGGCACCATCATTGAAGATGGGGACG...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGACGGTCATAGCTGATTaGGAAGGCCAACTCATAGAG +
Preference number: 4 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLTVIAD*EGQLIE
Trigger: CTCTATGAGTTGGCCTTCTCAATCAGCTATGACCGT...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACGTCGCCCATTGGTGCTaGACTGTGGATGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYVAHWC*TVDDVL
Trigger: AAGAACATCATCCACAGTGCAGCACCAATGGGCGAC...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAGTCGCCCATTGGTGCTaGACTGTGGATGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLVAHWC*TVDDVL
Trigger: AAGAACATCATCCACAGTGCAGCACCAATGGGCGAC...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCAGCAGACTTTATTTCTaGAGCAATCTCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ISAAISAGQGACTPLPTASRLYF*SNLCWS
Trigger: TGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTATGGTGCCTAGTATCTaGAGCCCATTACGGCTGATG +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTMVPSI*SPLRLM
Trigger: CATCAGCCGTAATGGGCTCCAGATACTAGGCACCAT...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTATGGTGCCTAGTATCTaGAGCCCATTACGGCTGATG +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSMVPSI*SPLRLM
Trigger: CATCAGCCGTAATGGGCTCCAGATACTAGGCACCAT...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTTTGGTTTGCAGCTGCTaGTTCATCACCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPLVCSC*FITCRC
Trigger: GCACCTACAGGTGATGAACCAGCAGCTGCAAACCAA...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCGCTGGGCGCGTTTCTaGAGAAGTACAACATGTTGT +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYRWARF*RSTTCC
Trigger: ACAACATGTTGTACTTCTCCAGAAACGCGCCCAGCG...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTCGCTGGGCGCGTTTCTaGAGAAGTACAACATGTTGT +
Preference number: 4 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSRWARF*RSTTCC
Trigger: ACAACATGTTGTACTTCTCCAGAAACGCGCCCAGCG...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCGCTGGGCGCGTTTCTaGAGAAGTACAACATGTTGT +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTRWARF*RSTTCC
Trigger: ACAACATGTTGTACTTCTCCAGAAACGCGCCCAGCG...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAACGGTCATAGCTGATTaGGAAGGCCAACTCATAGAG +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLTVIAD*EGQLIE
Trigger: CTCTATGAGTTGGCCTTCTCAATCAGCTATGACCGT...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR TCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTACGGTCATAGCTGATTaGGAAGGCCAACTCATAGAG +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPTVIAD*EGQLIE
Trigger: CTCTATGAGTTGGCCTTCTCAATCAGCTATGACCGT...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACTATTCAACAGCTGGATaGCCACACAGAAGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYYSTAG*PHRRAR
Trigger: ACGAGCTCTTCTGTGTGGGCATCCAGCTGTTGAATA...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTTATTCAACAGCTGGATaGCCACACAGAAGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: FISAAISAGQGACTPLPTYSTAG*PHRRAR
Trigger: ACGAGCTCTTCTGTGTGGGCATCCAGCTGTTGAATA...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACGTCAAGGTTCAGCGATaGTGCAGTCATAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYVKVQR*CSHSRS
Trigger: ACTTCTGCTATGACTGCAGCATCGCTGAACCTTGAC...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCGTCAAGGTTCAGCGATaGTGCAGTCATAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLVKVQR*CSHSRS
Trigger: ACTTCTGCTATGACTGCAGCATCGCTGAACCTTGAC...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCAGCAGACTTTATTTCTaGAGCAATCTCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCSRLYF*SNLCWS
Trigger: TGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAGTCTTATTCAACAGCTaGATGCCCACACAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ADFISAAISAGQGACTPLVLFNS*MPTQKS
Trigger: GCTCTTCTGTGTGGGCATCCAGCTGTTGAATAAGAC...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTGTCTTATTCAACAGCTaGATGCCCACACAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QADFISAAISAGQGACTPVLFNS*MPTQKS
Trigger: GCTCTTCTGTGTGGGCATCCAGCTGTTGAATAAGAC...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCGTCTTATTCAACAGCTaGATGCCCACACAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTVLFNS*MPTQKS
Trigger: GCTCTTCTGTGTGGGCATCCAGCTGTTGAATAAGAC...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCGTCTTATTCAACAGCTaGATGCCCACACAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLVLFNS*MPTQKS
Trigger: GCTCTTCTGTGTGGGCATCCAGCTGTTGAATAAGAC...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCAGCAGACTTTATTTCTaGAGCAATCTCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: DFISAAISAGQGACTPLPSRLYF*SNLCWS
Trigger: TGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR GCA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCAGCAGACTTTATTTCTaGAGCAATCTCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLSRLYF*SNLCWS
Trigger: TGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 90 bp CCACGTTCCGCGGAGGCGCCATGGTCCAGCTGGGACGTGGGCGCCTaGACTTTCCGGAGACCGTGCACCTGCGGCCAAGGGTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: PRSAEAPWSSWDVGA*TFRRPCTCGQGCTW
Trigger: CCAGGTGCACCCTTGGCCGCAGGTGCACGGTCTCCGGAAAGTGCAGGCGCCCACGTCCCAGCTGGACCATGGCGCCTCCGCGGAACGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000571587.6
ENST00000652269.1
CDS CCA 90 bp GAGACCGTGCACCTGCGGCCAAGGGTGCACCTGGCCTGGGGCCCCTaGGGACGAGGAGGTCCTCCCTTTCCGAGACCTGACCTCGGTGTC +
Preference number: 5 (lower is better)
Translates to: ETVHLRPRVHLAWGP*GRGGPPFPRPDLGV
Trigger: GACACCGAGGTCAGGTCTCGGAAAGGGAGGACCTCCTCGTCCCCAGGGGCCCCAGGCCAGGTGCACCCTTGGCCGCAGGTGCACGGTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000571587.6
ENST00000652269.1
CDS GCA 90 bp CCTTTCCGAGACCTGACCTCGGTGTCCCGCACTCGCGGCCCAGACTaGTGCTCCTGGCCATGCAACGCGGCCTTCCCAAGGGAGCCGAGG +
Preference number: 5 (lower is better)
Translates to: PFRDLTSVSRTRGPD*CSWPCNAAFPREPR
Trigger: CCTCGGCTCCCTTGGGAAGGCCGCGTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCGAGTGCGGGACACCGAGGTCAGGTCTCGGAAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS CCA 90 bp CACTTTCCGGAGACCGTGCACCTGCGGCCAAGGGTGCACCTGGCCTaGGGCCCCTGGGGACGAGGAGGTCCTCCCTTTCCGAGACCTGAC +
Preference number: 5 (lower is better)
Translates to: HFPETVHLRPRVHLA*GPWGRGGPPFPRPD
Trigger: GTCAGGTCTCGGAAAGGGAGGACCTCCTCGTCCCCAGGGGCCCCAGGCCAGGTGCACCCTTGGCCGCAGGTGCACGGTCTCCGGAAAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000571587.6
ENST00000652269.1
CDS GCA 90 bp ACCTCGGTGTCCCGCACTCGCGGCCCAGACTGCTGCTCCTGGCCATaGAACGCGGCCTTCCCAAGGGAGCCGAGGTTAGTTCCGGGTTGG +
Preference number: 5 (lower is better)
Translates to: TSVSRTRGPDCCSWP*NAAFPREPRLVPGW
Trigger: CCAACCCGGAACTAACCTCGGCTCCCTTGGGAAGGCCGCGTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCGAGTGCGGGACACCGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360833.6
CDS CCA 90 bp GACCTGACCTCGGTGTCCCGCACTCGCGGCCCAGACTGCTGCTCCTaGCCATGCAACGCGGCCTTCCCAAGGGAGCCGAGGTTAGTTCCG +
Preference number: 5 (lower is better)
Translates to: DLTSVSRTRGPDCCS*PCNAAFPREPRLVP
Trigger: CGGAACTAACCTCGGCTCCCTTGGGAAGGCCGCGTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCGAGTGCGGGACACCGAGGTCAGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360833.6
ENST00000652269.1
CDS GCA 90 bp TTCCGAGACCTGACCTCGGTGTCCCGCACTCGCGGCCCAGACTGCTaGTCCTGGCCATGCAACGCGGCCTTCCCAAGGGAGCCGAGGTTA +
Preference number: 5 (lower is better)
Translates to: FRDLTSVSRTRGPDC*SWPCNAAFPREPRL
Trigger: TAACCTCGGCTCCCTTGGGAAGGCCGCGTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCGAGTGCGGGACACCGAGGTCAGGTCTCGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS CCA 90 bp AATCTTCACCACGTTCCGCGGAGGCGCCATGGTCCAGCTGGGACGTaGGCGCCTGCACTTTCCGGAGACCGTGCACCTGCGGCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: NLHHVPRRRHGPAGT*APALSGDRAPAAKG
Trigger: ACCCTTGGCCGCAGGTGCACGGTCTCCGGAAAGTGCAGGCGCCCACGTCCCAGCTGGACCATGGCGCCTCCGCGGAACGTGGTGAAGATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000571587.6
ENST00000652269.1
CDS CCA 90 bp GGCGGGCTGGCGCCCTCCTCCATGTCTCCGTACTGCAGCAGCTTGTaGTTGGGGGACAGGCAGCAGAACCACAGCTTATCCTGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: GGLAPSSMSPYCSSL*LGDRQQNHSLSWRR
Trigger: GCGGCGCCAGGATAAGCTGTGGTTCTGCTGCCTGTCCCCCAACCACAAGCTGCTGCAGTACGGAGACATGGAGGAGGGCGCCAGCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 90 bp GGAGCCCTTCTCCCGGACATGGGGGCAGTCCTTGCCTGTCAGGAGTaGCCTCATGTCGGCCACAGGGAGTTGCTCGGGCAGACTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GALLPDMGAVLACQE*PHVGHRELLGQTLQ
Trigger: CTGGAGAGTCTGCCCGAGCAACTCCCTGTGGCCGACATGAGGGCACTCCTGACAGGCAAGGACTGCCCCCATGTCCGGGAGAAGGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 90 bp ACAAGGCGCCTCAGGGCTTCCCGGCGCCCTTCAGGACTGTTACTCTaGAGCCCACCCAAGAGCTGCTCAGCCTCAAGGTCTGGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: TRRLRASRRPSGLLL*SPPKSCSASRSGAV
Trigger: CACGGCCCCAGACCTTGAGGCTGAGCAGCTCTTGGGTGGGCTGCAGAGTAACAGTCCTGAAGGGCGCCGGGAAGCCCTGAGGCGCCTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000571638.1
ENST00000652269.1
CDS TCA 90 bp CCAGCCGTGTCTGCTCGCTGCCCATGGGACTGCCCAGCAAGGCACTaGGCCCATCTGTCCACAGGTAGAACTCCCGCTTGGAGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: PAVSARCPWDCPARH*AHLSTGRTPAWRGQ
Trigger: TTGCCCCCTCCAAGCGGGAGTTCTACCTGTGGACAGATGGGCTCAGTGCCTTGCTGGGCAGTCCCATGGGCAGCGAGCAGACACGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 90 bp TTCTCCAGCTCCAGCAGACGCAGCTTGGTCTCCATGGTCAGCAGCTaGTCCAGGTCCAGCCGTGTCTGCTCGCTGCCCATGGGACTGCCC +
Preference number: 5 (lower is better)
Translates to: FSSSSRRSLVSMVSS*SRSSRVCSLPMGLP
Trigger: GGGCAGTCCCATGGGCAGCGAGCAGACACGGCTGGACCTGGAGCAGCTGCTGACCATGGAGACCAAGCTGCGTCTGCTGGAGCTGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CCA 90 bp GGATGGGCACGTTCTCCAGCTCCAGCAGACGCAGCTTGGTCTCCATaGTCAGCAGCTGCTCCAGGTCCAGCCGTGTCTGCTCGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: GWARSPAPADAAWSP*SAAAPGPAVSARCP
Trigger: TGGGCAGCGAGCAGACACGGCTGGACCTGGAGCAGCTGCTGACCATGGAGACCAAGCTGCGTCTGCTGGAGCTGGAGAACGTGCCCATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS TCA 90 bp CATCCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCTCGCTCTTaGCCAGCTGGCCCAGGGCTGGGCTGCTCAAGGTCACACTCTCCA +
Preference number: 5 (lower is better)
Translates to: HPVGAPAAYPGAPRS*PAGPGLGCSRSHSP
Trigger: TGGAGAGTGTGACCTTGAGCAGCCCAGCCCTGGGCCAGCTGGTCAAGAGCGAGGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571638.1
CDS TCA 90 bp GGTGCAGCCGTTCAGTCTGCCGCAGCCGCAGCACCTCCCCATAAGTaGGCGCATTCACCTTGGTTCGGAAGAGCTCCAGGGAAGTGGGCT +
Preference number: 5 (lower is better)
Translates to: GAAVQSAAAAAPPHK*AHSPWFGRAPGKWA
Trigger: AGCCCACTTCCCTGGAGCTCTTCCGAACCAAGGTGAATGCGCTCACTTATGGGGAGGTGCTGCGGCTGCGGCAGACTGAACGGCTGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 90 bp AAGAGCTCCAGGGAAGTGGGCTTCAGGGCCAGAGTGCGGGCCAGCTaGTCCCGCACCACCTGCATGACCTTGTCGAAGTCCTCCTGTGTA +
Preference number: 5 (lower is better)
Translates to: KSSREVGFRARVRAS*SRTTCMTLSKSSCV
Trigger: TACACAGGAGGACTTCGACAAGGTCATGCAGGTGGTGCGGGAGCAGCTGGCCCGCACTCTGGCCCTGAAGCCCACTTCCCTGGAGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCCGCCGGCTGCTGATCTaGCGGAAGAGCGTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: ISAAISAGQGACTPLPTARRLLI*RKSVPS
Trigger: TGAGGGGACGCTCTTCCGCAAGATCAGCAGCCGGCG...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp TGGGGCCGTGCTGAGGCACAGGATGCTGCCATTCTTGATCTCCGCGCGGTTATTTGGCGAAGGTTCCTCTaGCGTTCCACAGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: WGRAEAQDAAILDLRAVIWRRFL*RSTGLA
Trigger: GGCCAGCCCTGTGGAACGCAAGAGGAACCTTCGCCA...AATAACCGCGCGGAGATCAAGAATGGCAGCATCCTGTGCCTCAGCACGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR CAA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCAAGGGGCACTCGTGCTaGTCCTCGCGGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: ISAAISAGQGACTPLPTAKGHSC*SSRLLF
Trigger: GAACAGCAGCCGCGAGGACAAGCACGAGTGCCCCTT...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGCCGGCTGCTGATCTaGCGGAAGAGCGTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCRRLLI*RKSVPS
Trigger: TGAGGGGACGCTCTTCCGCAAGATCAGCAGCCGGCG...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCACATGGGGGCAGTCCTaGCCTGTCAGGAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: ISAAISAGQGACTPLPTATWGQS*PVRSAL
Trigger: GAGGGCACTCCTGACAGGCAAGGACTGCCCCCATGT...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp GCTGCTGGTTCATCACCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCTCGCATGGCGTCACGCATCTaGATGGCAATCTTCACCACG +
Preference number: 5 (lower is better)
Translates to: AAGSSPVGAPAAYPGAPRMASRI*MAIFTT
Trigger: CGTGGTGAAGATTGCCATCAAGATGCGTGACGCCAT...GCGAGGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAACCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR CAA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTAGGGGCACCTCGCTCTaGACCAGCTGGCCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: FISAAISAGQGACTPLPTRGTSL*TSWPRA
Trigger: AGCCCTGGGCCAGCTGGTCAAGAGCGAGGTGCCCCT...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCAAGGGGCACTCGTGCTaGTCCTCGCGGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCKGHSC*SSRLLF
Trigger: GAACAGCAGCCGCGAGGACAAGCACGAGTGCCCCTT...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCCGCCGGCTGCTGATCTaGCGGAAGAGCGTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSRRLLI*RKSVPS
Trigger: TGAGGGGACGCTCTTCCGCAAGATCAGCAGCCGGCG...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCTGCAGCAGCTTGTGGTaGGGGGACAGGCAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: ISAAISAGQGACTPLPTACSSLW*GDRQQN
Trigger: GTTCTGCTGCCTGTCCCCCAACCACAAGCTGCTGCA...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGTCGGCCACAGGGAGTaGCTCGGGCAGACTCTCCAG +
Preference number: 5 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSVGHRE*LGQTLQ
Trigger: CTGGAGAGTCTGCCCGAGCAACTCCCTGTGGCCGAC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGGCCATGGCCTTGGTTaGCAGCTGCTGGTTCATCAC +
Preference number: 5 (lower is better)
Translates to: ISAAISAGQGACTPLPTAGHGLG*QLLVHH
Trigger: GTGATGAACCAGCAGCTGCAAACCAAGGCCATGGCC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp GATCTCCGCGCGGTTATTCTCGGTGATGTATCTCCGGTGCCCATCCGCAAACTGGGCCATGGCCTTGGTTaGCAGCTGCTGGTTCATCAC +
Preference number: 5 (lower is better)
Translates to: DLRAVILGDVSPVPIRKLGHGLG*QLLVHH
Trigger: GTGATGAACCAGCAGCTGCAAACCAAGGCCATGGCC...CAGTTTGCGGATGGGCACCGGAGATACATCACCGAGAATAACCGCGCGGAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR CAA 90 bp CCATTCTTGATCTCCGCGCGGTTATTCTCGGTGATGTATCTCCGGTGCCCATCCAGCAGGGCCATGGCCTaGGTTTGCAGCTGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: PFLISARLFSVMYLRCPSSRAMA*VCSCWF
Trigger: GAACCAGCAGCTGCAAACCAAGGCCATGGCCCTGCT...GGATGGGCACCGGAGATACATCACCGAGAATAACCGCGCGGAGATCAAGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS-3UTR CAA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCAAGGGGCACTCGTGCTaGTCCTCGCGGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSKGHSC*SSRLLF
Trigger: GAACAGCAGCCGCGAGGACAAGCACGAGTGCCCCTT...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCAAGGGGCACTCGTGCTaGTCCTCGCGGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: DFISAAISAGQGACTPLPKGHSC*SSRLLF
Trigger: GAACAGCAGCCGCGAGGACAAGCACGAGTGCCCCTT...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGTGAGCGCATTCACCTaGGTTCGGAAGAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ISAAISAGQGACTPLPTAVSAFT*VRKSSR
Trigger: CCTGGAGCTCTTCCGAACCAAGGTGAATGCGCTCAC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCGCCGGCTGCTGATCTaGCGGAAGAGCGTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLRRLLI*RKSVPS
Trigger: TGAGGGGACGCTCTTCCGCAAGATCAGCAGCCGGCG...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGTACTGCAGCAGCTaGTGGTTGGGGGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLPYCSS*WLGDRQ
Trigger: CTGCCTGTCCCCCAACCACAAGCTGCTGCAGTACGG...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCCCGTACTGCAGCAGCTaGTGGTTGGGGGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: DFISAAISAGQGACTPLPPYCSS*WLGDRQ
Trigger: CTGCCTGTCCCCCAACCACAAGCTGCTGCAGTACGG...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCCCGTACTGCAGCAGCTaGTGGTTGGGGGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSPYCSS*WLGDRQ
Trigger: CTGCCTGTCCCCCAACCACAAGCTGCTGCAGTACGG...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAGTCGGCCACAGGGAGTaGCTCGGGCAGACTCTCCAG +
Preference number: 5 (lower is better)
Translates to: ADFISAAISAGQGACTPLVGHRE*LGQTLQ
Trigger: CTGGAGAGTCTGCCCGAGCAACTCCCTGTGGCCGAC...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTGTCGGCCACAGGGAGTaGCTCGGGCAGACTCTCCAG +
Preference number: 5 (lower is better)
Translates to: QADFISAAISAGQGACTPVGHRE*LGQTLQ
Trigger: CTGGAGAGTCTGCCCGAGCAACTCCCTGTGGCCGAC...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCACATGGGGGCAGTCCTaGCCTGTCAGGAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSTWGQS*PVRSAL
Trigger: GAGGGCACTCCTGACAGGCAAGGACTGCCCCCATGT...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGAGGGGGCAATGAAGTaGAGGTACGCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ISAAISAGQGACTPLPTAEGAMK*RYASSS
Trigger: GGAGGAGGAAGCGTACCTCAACTTCATTGCCCCCTC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCGGCCATGGCCTTGGTTaGCAGCTGCTGGTTCATCAC +
Preference number: 5 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCGHGLG*QLLVHH
Trigger: GTGATGAACCAGCAGCTGCAAACCAAGGCCATGGCC...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGAGCAGGGCCATGGCCTaGGTTTGCAGCTGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLSRAMA*VCSCWF
Trigger: GAACCAGCAGCTGCAAACCAAGGCCATGGCCCTGCT...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp GACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCAGCAGGGCCATGGCCTaGGTTTGCAGCTGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: DFISAAISAGQGACTPLPSRAMA*VCSCWF
Trigger: GAACCAGCAGCTGCAAACCAAGGCCATGGCCCTGCT...GGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCGAGAAGTACAACATGTaGTCCAGGGCCAGCAGACCG +
Preference number: 5 (lower is better)
Translates to: ISAAISAGQGACTPLPTAEKYNM*SRASRP
Trigger: CGGTCTGCTGGCCCTGGACAACATGTTGTACTTCTC...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCGTACTGCAGCAGCTaGTGGTTGGGGGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: QADFISAAISAGQGACTPPYCSS*WLGDRQ
Trigger: CTGCCTGTCCCCCAACCACAAGCTGCTGCAGTACGG...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTACATGGGGGCAGTCCTaGCCTGTCAGGAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: QADFISAAISAGQGACTPTWGQS*PVRSAL
Trigger: GAGGGCACTCCTGACAGGCAAGGACTGCCCCCATGT...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp TATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCGAGGGGGCAATGAAGTaGAGGTACGCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: YFCSNLCWSGCLHSSTHCEGAMK*RYASSS
Trigger: GGAGGAGGAAGCGTACCTCAACTTCATTGCCCCCTC...GCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCCAGCAGACGCAGCTaGGTCTCCATGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSSSRRS*VSMVSS
Trigger: GCTGCTGACCATGGAGACCAAGCTGCGTCTGCTGGA...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCATGGCGTCACGCATCTaGATGGCAATCTTCACCACG +
Preference number: 5 (lower is better)
Translates to: ISAAISAGQGACTPLPTAMASRI*MAIFTT
Trigger: CGTGGTGAAGATTGCCATCAAGATGCGTGACGCCAT...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CAA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTAGCAGGGCCATGGCCTaGGTTTGCAGCTGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: QADFISAAISAGQGACTPSRAMA*VCSCWF
Trigger: GAACCAGCAGCTGCAAACCAAGGCCATGGCCCTGCT...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACAGCAGGGCCATGGCCTaGGTTTGCAGCTGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYSRAMA*VCSCWF
Trigger: GAACCAGCAGCTGCAAACCAAGGCCATGGCCCTGCT...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp ATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGCCAGGTCCTGTGCTGGGTaGCTGTTAGAAAAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: ISAAISAGQGACTPLPTARSCAG*LLEKPS
Trigger: ACTGGGCTTTTCTAACAGCAACCCAGCACAGGACCT...GGCAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGTGAGCGCATTCACCTaGGTTCGGAAGAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLVSAFT*VRKSSR
Trigger: CCTGGAGCTCTTCCGAACCAAGGTGAATGCGCTCAC...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGTGAGCGCATTCACCTaGGTTCGGAAGAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSVSAFT*VRKSSR
Trigger: CCTGGAGCTCTTCCGAACCAAGGTGAATGCGCTCAC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTTGCAGCAGCTTGTGGTaGGGGGACAGGCAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: FISAAISAGQGACTPLPTCSSLW*GDRQQN
Trigger: GTTCTGCTGCCTGTCCCCCAACCACAAGCTGCTGCA...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp AGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTTGCAGCAGCTTGTGGTaGGGGGACAGGCAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: SRLYFCSNLCWSGCLHSSCSSLW*GDRQQN
Trigger: GTTCTGCTGCCTGTCCCCCAACCACAAGCTGCTGCA...AGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCTCCAGCAGACGCAGCTaGGTCTCCATGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTSSRRS*VSMVSS
Trigger: GCTGCTGACCATGGAGACCAAGCTGCGTCTGCTGGA...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTTCCAGCAGACGCAGCTaGGTCTCCATGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QADFISAAISAGQGACTPSSRRS*VSMVSS
Trigger: GCTGCTGACCATGGAGACCAAGCTGCGTCTGCTGGA...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCGGCCATGGCCTTGGTTaGCAGCTGCTGGTTCATCAC +
Preference number: 5 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLGHGLG*QLLVHH
Trigger: GTGATGAACCAGCAGCTGCAAACCAAGGCCATGGCC...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGGAGAAGTACAACATGTaGTCCAGGGCCAGCAGACCG +
Preference number: 5 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLEKYNM*SRASRP
Trigger: CGGTCTGCTGGCCCTGGACAACATGTTGTACTTCTC...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCGAGAAGTACAACATGTaGTCCAGGGCCAGCAGACCG +
Preference number: 5 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSEKYNM*SRASRP
Trigger: CGGTCTGCTGGCCCTGGACAACATGTTGTACTTCTC...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAGTGAGCGCATTCACCTaGGTTCGGAAGAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ADFISAAISAGQGACTPLVSAFT*VRKSSR
Trigger: CCTGGAGCTCTTCCGAACCAAGGTGAATGCGCTCAC...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCGAGGGGGCAATGAAGTaGAGGTACGCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLEGAMK*RYASSS
Trigger: GGAGGAGGAAGCGTACCTCAACTTCATTGCCCCCTC...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS TCA 90 bp AATGAAGTTGAGGTACGCTTCCTCCTCCCCACGGTCATAGCTGATTaGGAAGGCCAACTCATAGAGGTCCTTGTTCTGCTTCCCGGAGCC +
Preference number: 5 (lower is better)
Translates to: NEVEVRFLLPTVIAD*EGQLIEVLVLLPGA
Trigger: GGCTCCGGGAAGCAGAACAAGGACCTCTATGAGTTGGCCTTCTCAATCAGCTATGACCGTGGGGAGGAGGAAGCGTACCTCAACTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CCA 90 bp ACCTCTCCTAGGTCGTCCCCATCTTCAATGATGGTGCCTAGTATCTaGAGCCCATTACGGCTGATGACCTCCCTGGCAAAGATCATGTCC +
Preference number: 5 (lower is better)
Translates to: TSPRSSPSSMMVPSI*SPLRLMTSLAKIMS
Trigger: GGACATGATCTTTGCCAGGGAGGTCATCAGCCGTAATGGGCTCCAGATACTAGGCACCATCATTGAAGATGGGGACGACCTAGGAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000571638.1
ENST00000652269.1
CDS-3UTR CAA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCATGGCGTCACGCATCTaGATGGCAATCTTCACCACG +
Preference number: 5 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSMASRI*MAIFTT
Trigger: CGTGGTGAAGATTGCCATCAAGATGCGTGACGCCAT...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CAA 90 bp TTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTGAGGTCCTGTGCTGGGTaGCTGTTAGAAAAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: LFLQQSLLVRVPALLYPLRSCAG*LLEKPS
Trigger: ACTGGGCTTTTCTAACAGCAACCCAGCACAGGACCT...CAGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACGAGAAGTACAACATGTaGTCCAGGGCCAGCAGACCG +
Preference number: 5 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYEKYNM*SRASRP
Trigger: CGGTCTGCTGGCCCTGGACAACATGTTGTACTTCTC...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CCAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCAGGATGCTGCCATTCTaGATCTCCGCGCGGTTATTC +
Preference number: 5 (lower is better)
Translates to: PSRLYFCSNLCWSGCLHSRMLPF*ISARLF
Trigger: GAATAACCGCGCGGAGATCAAGAATGGCAGCATCCT...GGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CCA 90 bp GAGAGCCTGCAGTACGTACAGGTGATGAGCCATCTCGTCGCCCATTaGTGCTGCACTGTGGATGATGTTCTTATAGATGAACTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: ESLQYVQVMSHLVAH*CCTVDDVLIDELAK
Trigger: CTTCGCCAGTTCATCTATAAGAACATCATCCACAGTGCAGCACCAATGGGCGACGAGATGGCTCATCACCTGTACGTACTGCAGGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000571638.1
ENST00000652269.1
CDS-3UTR CAA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTAATGGCGTCACGCATCTaGATGGCAATCTTCACCACG +
Preference number: 5 (lower is better)
Translates to: ADFISAAISAGQGACTPLMASRI*MAIFTT
Trigger: CGTGGTGAAGATTGCCATCAAGATGCGTGACGCCAT...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS-3UTR CAA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTTTAGAAAAGCCCAGTTaGCGGAACTCTCGGGCACAG +
Preference number: 5 (lower is better)
Translates to: FISAAISAGQGACTPLPTLEKPS*RNSRAQ
Trigger: CTGTGCCCGAGAGTTCCGCAAACTGGGCTTTTCTAA...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp GCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTATTAGAAAAGCCCAGTTaGCGGAACTCTCGGGCACAG +
Preference number: 5 (lower is better)
Translates to: ADFISAAISAGQGACTPLLEKPS*RNSRAQ
Trigger: CTGTGCCCGAGAGTTCCGCAAACTGGGCTTTTCTAA...TAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTTTAGAAAAGCCCAGTTaGCGGAACTCTCGGGCACAG +
Preference number: 5 (lower is better)
Translates to: QADFISAAISAGQGACTPLEKPS*RNSRAQ
Trigger: CTGTGCCCGAGAGTTCCGCAAACTGGGCTTTTCTAA...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACAGGTCCTGTGCTGGGTaGCTGTTAGAAAAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: QTLFLQQSLLVRVPALLYRSCAG*LLEKPS
Trigger: ACTGGGCTTTTCTAACAGCAACCCAGCACAGGACCT...GTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp TTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCCACTACCACCTGCATGACCTaGTCGAAGTCCTCCTGTGTA +
Preference number: 5 (lower is better)
Translates to: FISAAISAGQGACTPLPTTTCMT*SKSSCV
Trigger: TACACAGGAGGACTTCGACAAGGTCATGCAGGTGGT...AGTGGGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp AAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCACCACCTGCATGACCTaGTCGAAGTCCTCCTGTGTA +
Preference number: 5 (lower is better)
Translates to: KQTLFLQQSLLVRVPALLTTCMT*SKSSCV
Trigger: TACACAGGAGGACTTCGACAAGGTCATGCAGGTGGT...GAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCACCACCTGCATGACCTaGTCGAAGTCCTCCTGTGTA +
Preference number: 5 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTTTCMT*SKSSCV
Trigger: TACACAGGAGGACTTCGACAAGGTCATGCAGGTGGT...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp CAAGCAGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTACCACCTGCATGACCTaGTCGAAGTCCTCCTGTGTA +
Preference number: 5 (lower is better)
Translates to: QADFISAAISAGQGACTPTTCMT*SKSSCV
Trigger: TACACAGGAGGACTTCGACAAGGTCATGCAGGTGGT...AGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS-3UTR CAA 90 bp AGACTTTATTTCTGCAGCAATCTCTGCTGGTCAGGGTGCCTGCACTCCTCTACCAGGATGCTGCCATTCTaGATCTCCGCGCGGTTATTC +
Preference number: 5 (lower is better)
Translates to: RLYFCSNLCWSGCLHSSTRMLPF*ISARLF
Trigger: GAATAACCGCGCGGAGATCAAGAATGGCAGCATCCT...GGTAGAGGAGTGCAGGCACCCTGACCAGCAGAGATTGCTGCAGAAATAAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 90 bp AGCCTGCAGTACGTACAGGTGATGAGCCATCTCGTCGCCCATTGGTaGTGCACTGTGGATGATGTTCTTATAGATGAACTGGCGAAGGTT +
Preference number: 5 (lower is better)
Translates to: SLQYVQVMSHLVAHW*CTVDDVLIDELAKV
Trigger: AACCTTCGCCAGTTCATCTATAAGAACATCATCCACAGTGCAGCACCAATGGGCGACGAGATGGCTCATCACCTGTACGTACTGCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000571638.1
ENST00000652269.1
CDS-3UTR CAA 90 bp GTGGATGATGTTCTTATAGATGAACTGGCGAAGGTTCCTCTTGCGTTCCACAGGAGGATGCTGCCATTCTaGATCTCCGCGCGGTTATTC +
Preference number: 5 (lower is better)
Translates to: VDDVLIDELAKVPLAFHRRMLPF*ISARLF
Trigger: GAATAACCGCGCGGAGATCAAGAATGGCAGCATCCT...CCTGTGGAACGCAAGAGGAACCTTCGCCAGTTCATCTATAAGAACATCATCCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571587.6
CDS GCA 72 bp AGCTGGGACGTGGGCGCCTGCACTTTCCGGAGACCGTaGACCTGCGGCCAAGGGTGCACCTGGCCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: SWDVGACTFRRP*TCGQGCTWPGA
Trigger: GGCCCCAGGCCAGGTGCACCCTTGGCCGCAGGTGCACGGTCTCCGGAAAGTGCAGGCGCCCACGTCCCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000571587.6
ENST00000652269.1
CDS CCA 72 bp TCGGTGTCCCGCACTCGCGGCCCAGACTGCTGCTCCTaGCCATGCAACGCGGCCTTCCCAAGGGAGCCGAGG +
Preference number: 6 (lower is better)
Translates to: SVSRTRGPDCCS*PCNAAFPREPR
Trigger: CCTCGGCTCCCTTGGGAAGGCCGCGTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCGAGTGCGGGACACCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS CCA 72 bp CACGTTCCGCGGAGGCGCCATGGTCCAGCTGGGACGTaGGCGCCTGCACTTTCCGGAGACCGTGCACCTGCG +
Preference number: 6 (lower is better)
Translates to: HVPRRRHGPAGT*APALSGDRAPA
Trigger: CGCAGGTGCACGGTCTCCGGAAAGTGCAGGCGCCCACGTCCCAGCTGGACCATGGCGCCTCCGCGGAACGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000571587.6
ENST00000652269.1
CDS CCA 72 bp GCACCCGAGGACTCCCCCTCCACCTCGAAGGCAGCCTaGCGTAGGACCTGCAGCTGCTCCCGCTGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: APEDSPSTSKAA*RRTCSCSRCSW
Trigger: CCAGGAGCAGCGGGAGCAGCTGCAGGTCCTACGCCAGGCTGCCTTCGAGGTGGAGGGGGAGTCCTCGGGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS TCA 72 bp CCCCTGGGGACGAGGAGGTCCTCCCTTTCCGAGACCTaGCCTCGGTGTCCCGCACTCGCGGCCCAGACTGCT +
Preference number: 6 (lower is better)
Translates to: PLGTRRSSLSET*PRCPALAAQTA
Trigger: AGCAGTCTGGGCCGCGAGTGCGGGACACCGAGGTCAGGTCTCGGAAAGGGAGGACCTCCTCGTCCCCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000571587.6
ENST00000652269.1
CDS GCA 72 bp CTGACCTCGGTGTCCCGCACTCGCGGCCCAGACTGCTaGTCCTGGCCATGCAACGCGGCCTTCCCAAGGGAG +
Preference number: 6 (lower is better)
Translates to: LTSVSRTRGPDC*SWPCNAAFPRE
Trigger: CTCCCTTGGGAAGGCCGCGTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCGAGTGCGGGACACCGAGGTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS GCA 72 bp GACCTGACCTCGGTGTCCCGCACTCGCGGCCCAGACTaGTGCTCCTGGCCATGCAACGCGGCCTTCCCAAGG +
Preference number: 6 (lower is better)
Translates to: DLTSVSRTRGPD*CSWPCNAAFPR
Trigger: CCTTGGGAAGGCCGCGTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCGAGTGCGGGACACCGAGGTCAGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS CCA 72 bp TCTTCACCACGTTCCGCGGAGGCGCCATGGTCCAGCTaGGACGTGGGCGCCTGCACTTTCCGGAGACCGTGC +
Preference number: 6 (lower is better)
Translates to: SSPRSAEAPWSS*DVGACTFRRPC
Trigger: GCACGGTCTCCGGAAAGTGCAGGCGCCCACGTCCCAGCTGGACCATGGCGCCTCCGCGGAACGTGGTGAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000571587.6
ENST00000652269.1
CDS CCA 72 bp CGCAGCTCCAGTATAGGGGGAGCCAGTGTGCCCTCCTaGTGCAGCCGTTCAGTCTGCCGCAGCCGCAGCACC +
Preference number: 6 (lower is better)
Translates to: RSSSIGGASVPS*CSRSVCRSRST
Trigger: GGTGCTGCGGCTGCGGCAGACTGAACGGCTGCACCAGGAGGGCACACTGGCTCCCCCTATACTGGAGCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CAA 90 bp GGGCTGGCGCCCTCCTCCATGTCTCCGTACTGCAGCAGCTTGTGGTaGGGGGACAGGCAGCAGAACCACAGCTTATCCTGGCGCCGCCGG +
Preference number: 6 (lower is better)
Translates to: GLAPSSMSPYCSSLW*GDRQQNHSLSWRRR
Trigger: CCGGCGGCGCCAGGATAAGCTGTGGTTCTGCTGCCTGTCCCCCAACCACAAGCTGCTGCAGTACGGAGACATGGAGGAGGGCGCCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 72 bp TCCCGCACTCGCGGCCCAGACTGCTGCTCCTGGCCATaGAACGCGGCCTTCCCAAGGGAGCCGAGGTTAGTT +
Preference number: 6 (lower is better)
Translates to: SRTRGPDCCSWP*NAAFPREPRLV
Trigger: AACTAACCTCGGCTCCCTTGGGAAGGCCGCGTTGCATGGCCAGGAGCAGCAGTCTGGGCCGCGAGTGCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000652269.1
CDS GCA 72 bp AGCTCCAGTATAGGGGGAGCCAGTGTGCCCTCCTGGTaGAGCCGTTCAGTCTGCCGCAGCCGCAGCACCTCC +
Preference number: 6 (lower is better)
Translates to: SSSIGGASVPSW*SRSVCRSRSTS
Trigger: GGAGGTGCTGCGGCTGCGGCAGACTGAACGGCTGCACCAGGAGGGCACACTGGCTCCCCCTATACTGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 72 bp CGGAAGAGCGTCCCCTCACAGAGGCGGAGCAAGCGCTaGTGGCGGATCAGGCCCATGAGCTCTGGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: RKSVPSQRRSKR*WRIRPMSSGFS
Trigger: GCTGAAGCCAGAGCTCATGGGCCTGATCCGCCAGCAGCGCTTGCTCCGCCTCTGTGAGGGGACGCTCTTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 72 bp CTCCCGGACATGGGGGCAGTCCTTGCCTGTCAGGAGTaGCCTCATGTCGGCCACAGGGAGTTGCTCGGGCAG +
Preference number: 6 (lower is better)
Translates to: LPDMGAVLACQE*PHVGHRELLGQ
Trigger: CTGCCCGAGCAACTCCCTGTGGCCGACATGAGGGCACTCCTGACAGGCAAGGACTGCCCCCATGTCCGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 72 bp TCCCGGAGCCCTTCTCCCGGACATGGGGGCAGTCCTTaGCTGTCAGGAGTGCCCTCATGTCGGCCACAGGGA +
Preference number: 6 (lower is better)
Translates to: SRSPSPGHGGSP*LSGVPSCRPQG
Trigger: TCCCTGTGGCCGACATGAGGGCACTCCTGACAGGCAAGGACTGCCCCCATGTCCGGGAGAAGGGCTCCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CCA 72 bp TCCTTCAGCACAGCGGCCAGGGGCTTCGCCTGCAAGTaGAGTGGTCATTCTCGCGGCCTGGGCAGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: SFSTAARGFACK*SGHSRGLGREG
Trigger: TCCCTCCCTGCCCAGGCCGCGAGAATGACCACTCCACTTGCAGGCGAAGCCCCTGGCCGCTGTGCTGAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477898.5
CDS CAA 72 bp TTCCCGGAGCCCTTCTCCCGGACATGGGGGCAGTCCTaGCCTGTCAGGAGTGCCCTCATGTCGGCCACAGGG +
Preference number: 6 (lower is better)
Translates to: FPEPFSRTWGQS*PVRSALMSATG
Trigger: CCCTGTGGCCGACATGAGGGCACTCCTGACAGGCAAGGACTGCCCCCATGTCCGGGAGAAGGGCTCCGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CAA 90 bp AGGCAGCAGAACCACAGCTTATCCTGGCGCCGCCGGCTGCTGATCTaGCGGAAGAGCGTCCCCTCACAGAGGCGGAGCAAGCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: RQQNHSLSWRRRLLI*RKSVPSQRRSKRCW
Trigger: CCAGCAGCGCTTGCTCCGCCTCTGTGAGGGGACGCTCTTCCGCAAGATCAGCAGCCGGCGGCGCCAGGATAAGCTGTGGTTCTGCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS TCA 72 bp GGGGCGTCCGCATGCGCGGCTCCAGCAGCCCCAGCATaGGAGCCTGCAGTACGTACAGGTGATGAGCCATCT +
Preference number: 6 (lower is better)
Translates to: GASACAAPAAPA*EPAVRTGDEPS
Trigger: AGATGGCTCATCACCTGTACGTACTGCAGGCTCTCATGCTGGGGCTGCTGGAGCCGCGCATGCGGACGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 72 bp CCCGGGCAAAGGGGCACTCGTGCTTGTCCTCGCGGCTaGTGTTCTCCAACACAAACCGGCTGTACGCGCTGG +
Preference number: 6 (lower is better)
Translates to: PGQRGTRACPRG*CSPTQTGCTRW
Trigger: CCAGCGCGTACAGCCGGTTTGTGTTGGAGAACAGCAGCCGCGAGGACAAGCACGAGTGCCCCTTTGCCCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 72 bp CACGGAGCAGCTCACACAGCAGCACCGTCAGCTGGATaGTGCCCCGGGCAAAGGGGCACTCGTGCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: HGAAHTAAPSAG*CPGQRGTRACP
Trigger: AGGACAAGCACGAGTGCCCCTTTGCCCGGGGCAGCATCCAGCTGACGGTGCTGCTGTGTGAGCTGCTCCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 72 bp AGGGAAGTGGGCTTCAGGGCCAGAGTGCGGGCCAGCTaGTCCCGCACCACCTGCATGACCTTGTCGAAGTCC +
Preference number: 6 (lower is better)
Translates to: REVGFRARVRAS*SRTTCMTLSKS
Trigger: GGACTTCGACAAGGTCATGCAGGTGGTGCGGGAGCAGCTGGCCCGCACTCTGGCCCTGAAGCCCACTTCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CCA 72 bp CCAACACGGAGCAGCTCACACAGCAGCACCGTCAGCTaGATGCTGCCCCGGGCAAAGGGGCACTCGTGCTTG +
Preference number: 6 (lower is better)
Translates to: PTRSSSHSSTVS*MLPRAKGHSCL
Trigger: CAAGCACGAGTGCCCCTTTGCCCGGGGCAGCATCCAGCTGACGGTGCTGCTGTGTGAGCTGCTCCGTGTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CCA 72 bp GCGCATTCACCTTGGTTCGGAAGAGCTCCAGGGAAGTaGGCTTCAGGGCCAGAGTGCGGGCCAGCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: AHSPWFGRAPGK*ASGPECGPAAP
Trigger: GGGAGCAGCTGGCCCGCACTCTGGCCCTGAAGCCCACTTCCCTGGAGCTCTTCCGAACCAAGGTGAATGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CAA 90 bp GTAGGCGGGCTGGCGCCCTCCTCCATGTCTCCGTACTGCAGCAGCTaGTGGTTGGGGGACAGGCAGCAGAACCACAGCTTATCCTGGCGC +
Preference number: 6 (lower is better)
Translates to: VGGLAPSSMSPYCSS*WLGDRQQNHSLSWR
Trigger: GCGCCAGGATAAGCTGTGGTTCTGCTGCCTGTCCCCCAACCACAAGCTGCTGCAGTACGGAGACATGGAGGAGGGCGCCAGCCCGCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS TCA 72 bp AGCAGAACCACAGCTTATCCTGGCGCCGCCGGCTGCTaGTCTTGCGGAAGAGCGTCCCCTCACAGAGGCGGA +
Preference number: 6 (lower is better)
Translates to: SRTTAYPGAAGC*SCGRASPHRGG
Trigger: TCCGCCTCTGTGAGGGGACGCTCTTCCGCAAGATCAGCAGCCGGCGGCGCCAGGATAAGCTGTGGTTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 72 bp GCGGCCAGGGGCTTCGCCTGGTCCAGCTGGATGAGCTaGGGGATGGCGTCACGCATCTTGATGGCAATCTTC +
Preference number: 6 (lower is better)
Translates to: AARGFAWSSWMS*GMASRILMAIF
Trigger: GAAGATTGCCATCAAGATGCGTGACGCCATCCCGCAGCTCATCCAGCTGGACCAGGCGAAGCCCCTGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000571587.6
ENST00000652269.1
CDS GCA 72 bp TCCAGCAGACGCAGCTTGGTCTCCATGGTCAGCAGCTaGTCCAGGTCCAGCCGTGTCTGCTCGCTGCCCATG +
Preference number: 6 (lower is better)
Translates to: SSRRSLVSMVSS*SRSSRVCSLPM
Trigger: CATGGGCAGCGAGCAGACACGGCTGGACCTGGAGCAGCTGCTGACCATGGAGACCAAGCTGCGTCTGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CAA 72 bp AACCACAGCTTATCCTGGCGCCGCCGGCTGCTGATCTaGCGGAAGAGCGTCCCCTCACAGAGGCGGAGCAAG +
Preference number: 6 (lower is better)
Translates to: NHSLSWRRRLLI*RKSVPSQRRSK
Trigger: CTTGCTCCGCCTCTGTGAGGGGACGCTCTTCCGCAAGATCAGCAGCCGGCGGCGCCAGGATAAGCTGTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CAA 90 bp TCATCCTGTAGGTGCACCAGCAGCCTATCCAGGGGCACCTCGCTCTaGACCAGCTGGCCCAGGGCTGGGCTGCTCAAGGTCACACTCTCC +
Preference number: 6 (lower is better)
Translates to: SSCRCTSSLSRGTSL*TSWPRAGLLKVTLS
Trigger: GGAGAGTGTGACCTTGAGCAGCCCAGCCCTGGGCCAGCTGGTCAAGAGCGAGGTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571638.1
CDS CAA 90 bp TTCGCCTGGTCCAGCTGGATGAGCTGCGGGATGGCGTCACGCATCTaGATGGCAATCTTCACCACGTTCCGCGGAGGCGCCATGGTCCAG +
Preference number: 6 (lower is better)
Translates to: FAWSSWMSCGMASRI*MAIFTTFRGGAMVQ
Trigger: CTGGACCATGGCGCCTCCGCGGAACGTGGTGAAGATTGCCATCAAGATGCGTGACGCCATCCCGCAGCTCATCCAGCTGGACCAGGCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000571587.6
ENST00000652269.1
CDS GCA 72 bp CCTTCAGGACTGTTACTCTGCAGCCCACCCAAGAGCTaGTCAGCCTCAAGGTCTGGGGCCGTGCTGAGGCAC +
Preference number: 6 (lower is better)
Translates to: PSGLLLCSPPKS*SASRSGAVLRH
Trigger: GTGCCTCAGCACGGCCCCAGACCTTGAGGCTGAGCAGCTCTTGGGTGGGCTGCAGAGTAACAGTCCTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000571638.1
ENST00000652269.1
CDS CAA 72 bp TCCAGCTGGATGAGCTGCGGGATGGCGTCACGCATCTaGATGGCAATCTTCACCACGTTCCGCGGAGGCGCC +
Preference number: 6 (lower is better)
Translates to: SSWMSCGMASRI*MAIFTTFRGGA
Trigger: GGCGCCTCCGCGGAACGTGGTGAAGATTGCCATCAAGATGCGTGACGCCATCCCGCAGCTCATCCAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000571587.6
ENST00000652269.1
CDS TCA 72 bp GTTCAGTCTGCCGCAGCCGCAGCACCTCCCCATAAGTaGGCGCATTCACCTTGGTTCGGAAGAGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: VQSAAAAAPPHK*AHSPWFGRAPG
Trigger: CCCTGGAGCTCTTCCGAACCAAGGTGAATGCGCTCACTTATGGGGAGGTGCTGCGGCTGCGGCAGACTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CCA 72 bp CTCTGGTCTTGGCCGAAGAACATGGGTGAGAAGTCCTaGGCTGTCTCAGAGCAGGGCTCCCCAACACGGAGC +
Preference number: 6 (lower is better)
Translates to: LWSWPKNMGEKS*AVSEQGSPTRS
Trigger: GCTCCGTGTTGGGGAGCCCTGCTCTGAGACAGCCCAGGACTTCTCACCCATGTTCTTCGGCCAAGACCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CAA 72 bp CTGGCGCCCTCCTCCATGTCTCCGTACTGCAGCAGCTaGTGGTTGGGGGACAGGCAGCAGAACCACAGCTTA +
Preference number: 6 (lower is better)
Translates to: LAPSSMSPYCSS*WLGDRQQNHSL
Trigger: TAAGCTGTGGTTCTGCTGCCTGTCCCCCAACCACAAGCTGCTGCAGTACGGAGACATGGAGGAGGGCGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CCA 72 bp AGCTGGATGCCCACACAGAAGAGCTCGTGGAAGCTCTaGTCTTGGCCGAAGAACATGGGTGAGAAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SWMPTQKSSWKL*SWPKNMGEKSW
Trigger: CCAGGACTTCTCACCCATGTTCTTCGGCCAAGACCAGAGCTTCCACGAGCTCTTCTGTGTGGGCATCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CAA 72 bp TCTGGGGCCGTGCTGAGGCACAGGATGCTGCCATTCTaGATCTCCGCGCGGTTATTCTCGGTGATGTATCTC +
Preference number: 6 (lower is better)
Translates to: SGAVLRHRMLPF*ISARLFSVMYL
Trigger: GAGATACATCACCGAGAATAACCGCGCGGAGATCAAGAATGGCAGCATCCTGTGCCTCAGCACGGCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS CCA 72 bp AGGTCGTCCCCATCTTCAATGATGGTGCCTAGTATCTaGAGCCCATTACGGCTGATGACCTCCCTGGCAAAG +
Preference number: 6 (lower is better)
Translates to: RSSPSSMMVPSI*SPLRLMTSLAK
Trigger: CTTTGCCAGGGAGGTCATCAGCCGTAATGGGCTCCAGATACTAGGCACCATCATTGAAGATGGGGACGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000571638.1
ENST00000652269.1
CDS TCA 72 bp GAGGTACGCTTCCTCCTCCCCACGGTCATAGCTGATTaGGAAGGCCAACTCATAGAGGTCCTTGTTCTGCTT +
Preference number: 6 (lower is better)
Translates to: EVRFLLPTVIAD*EGQLIEVLVLL
Trigger: AAGCAGAACAAGGACCTCTATGAGTTGGCCTTCTCAATCAGCTATGACCGTGGGGAGGAGGAAGCGTACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000652269.1
CDS GCA 72 bp GTACAGGTGATGAGCCATCTCGTCGCCCATTGGTGCTaGACTGTGGATGATGTTCTTATAGATGAACTGGCG +
Preference number: 6 (lower is better)
Translates to: VQVMSHLVAHWC*TVDDVLIDELA
Trigger: CGCCAGTTCATCTATAAGAACATCATCCACAGTGCAGCACCAATGGGCGACGAGATGGCTCATCACCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000571638.1
ENST00000652269.1
CDS CCA 72 bp CAGTACGTACAGGTGATGAGCCATCTCGTCGCCCATTaGTGCTGCACTGTGGATGATGTTCTTATAGATGAA +
Preference number: 6 (lower is better)
Translates to: QYVQVMSHLVAH*CCTVDDVLIDE
Trigger: TTCATCTATAAGAACATCATCCACAGTGCAGCACCAATGGGCGACGAGATGGCTCATCACCTGTACGTACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360833.6
ENST00000393997.8
ENST00000477898.5
ENST00000571638.1
ENST00000652269.1