RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELMO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000062598

Ensembl transcript IDs: ENST00000290246.11, ENST00000352077.6, ENST00000372176.5, ENST00000396391.5, ENST00000425546.5, ENST00000450812.5, ENST00000452857.5, ENST00000462491.5, ENST00000464448.1, ENST00000467800.5, ENST00000480042.5, ENST00000481852.5, ENST00000487583.5, ENST00000488853.5, ENST00000497412.5

Found 728 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGACCTCACCACAGTCTAGGCCCAGGCCTCAGCTGGGTTTTCCCTaGAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: VTSPQSRPRPQLGFP*SVPGDLRGQDLARR
Trigger: CCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTGCAGGGAAAACCCAGCTGAGGCCTGGGCCTAGACTGTGGTGAGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 90 bp GTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTaGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATG +
Preference number: 1 (lower is better)
Translates to: VYKCCSTREAPLAQV*PQPASASSLKSWPM
Trigger: CATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR TCA 90 bp GAAGACAAGCTCAAGGTCACAGAGGGAGCAACAACCAGATGGGGCTaGGGCTCCCCAGTGCCTCAGTCTTGTGACTCAGTTCTGCAGACC +
Preference number: 1 (lower is better)
Translates to: EDKLKVTEGATTRWG*GSPVPQSCDSVLQT
Trigger: GGTCTGCAGAACTGAGTCACAAGACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTGTGACCTTGAGCTTGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
3UTR GCA 90 bp GCTCCCCAGTGCCTCAGTCTTGTGACTCAGTTCTGCAGACCAAGCTaGTTTTCCAGCTCAGGGATTCTCCAGGTGCCAGCCAGCTGTCAA +
Preference number: 1 (lower is better)
Translates to: APQCLSLVTQFCRPS*FSSSGILQVPASCQ
Trigger: TTGACAGCTGGCTGGCACCTGGAGAATCCCTGAGCTGGAAAAGCAGCTTGGTCTGCAGAACTGAGTCACAAGACTGAGGCACTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
3UTR GCA 90 bp CCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTaGTGGGATGAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGC +
Preference number: 1 (lower is better)
Translates to: PGDLRGQDLARRSLT*WDETERLQGEISVC
Trigger: GCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTaGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAA +
Preference number: 1 (lower is better)
Translates to: ANGRNHSTRKGRPTS*GLEGQRKANWRGLQ
Trigger: TTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR TCA 90 bp CTCTCTGGAGGACGGGAGGGACAGGTGCTAACTTCAATGGACAAATaGGGGCCTACGGCACCAAGTGGAAGACAAGCTCAAGGTCACAGA +
Preference number: 1 (lower is better)
Translates to: LSGGREGQVLTSMDK*GPTAPSGRQAQGHR
Trigger: TCTGTGACCTTGAGCTTGTCTTCCACTTGGTGCCGTAGGCCCTCATTTGTCCATTGAAGTTAGCACCTGTCCCTCCCGTCCTCCAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
3UTR CCA 90 bp GGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTaGGATGAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGCTCT +
Preference number: 1 (lower is better)
Translates to: GDLRGQDLARRSLTC*DETERLQGEISVCS
Trigger: AGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 90 bp GCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTaGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGT +
Preference number: 1 (lower is better)
Translates to: AETIALGREGQLPGV*KAKGKQTGGGCNSG
Trigger: ACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 90 bp GCCTTCATGACTCTTAGTAGACAGGGACCAAGAGGAAACTCTGGGTaGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACC +
Preference number: 1 (lower is better)
Translates to: AFMTLSRQGPRGNSG*SEVGLRNGWHLLAT
Trigger: GGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCCTGTCTACTAAGAGTCATGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR TCA 90 bp GTAGACAGGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTaGGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATT +
Preference number: 1 (lower is better)
Translates to: VDRDQEETLGGPRWV*EMAGIYWPPKSLQI
Trigger: AATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCCTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 90 bp TCTGTACAAGCAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTaGGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCA +
Preference number: 1 (lower is better)
Translates to: SVQAKDKAPECKCFS*AQNPFSWVPSFLAP
Trigger: TGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTGCTTGTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 90 bp CCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTaGCATTTACTGGCCACCAAAATCACTACAGATTCTGTACAAGCA +
Preference number: 1 (lower is better)
Translates to: PRGNSGWSEVGLRNG*HLLATKITTDSVQA
Trigger: TGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 90 bp GGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTaGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTGGA +
Preference number: 1 (lower is better)
Translates to: GDPADQRAGSGGKGE*LLLNPFQEAVSWTG
Trigger: TCCAGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 90 bp AAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTTaGACTGGAAGGCAAGGGCATCTGCTGTTTGTTCCTCGTGGCCCA +
Preference number: 1 (lower is better)
Translates to: KGEWLLLNPFQEAVS*TGRQGHLLFVPRGP
Trigger: TGGGCCACGAGGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 90 bp CAATTCCAACACCTCCTGAAGGAGAAAGGGTTTAAATTAGAGCGATaGAACAGCCTGGGGTCTGCACATCAAGATCTTGGCCAAAGTCCT +
Preference number: 1 (lower is better)
Translates to: QFQHLLKEKGFKLER*NSLGSAHQDLGQSP
Trigger: AGGACTTTGGCCAAGATCTTGATGTGCAGACCCCAGGCTGTTCCATCGCTCTAATTTAAACCCTTTCTCCTTCAGGAGGTGTTGGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR CCA 90 bp GGAGAGAGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACCCACTGGCACAGGTGTaGCCTCAGCCGGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: GERLCVWFTSAAAPGKPHPLAQV*PQPASA
Trigger: GGCTGAGGCCGGCTGAGGCCACACCTGTGCCAGTGG...GTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCTCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCTCCCAGGCTTCATGGTaGTGGAGTGGGCAGAGCACC +
Preference number: 2 (lower is better)
Translates to: TGVASAGLSQLPEIMANGSQASW*WSGQST
Trigger: GGTGCTCTGCCCACTCCATCACCATGAAGCCTGGGA...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCCGGCCCAGGCCTCAGCTaGGTTTTCCCTGCAGCGTTC +
Preference number: 2 (lower is better)
Translates to: CGLQVLQHQGSPTGTGVAGPGLS*VFPAAF
Trigger: GAACGCTGCAGGGAAAACCCAGCTGAGGCCTGGGCC...GGCCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp AGGTCACAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTTCAAAGGCTGTCGTGTaGTGGTCTCCTCCCGTGGGC +
Preference number: 2 (lower is better)
Translates to: RSQREQQPDGAEAPQCLSSKAVV*WSPPVG
Trigger: GCCCACGGGAGGAGACCATCACACGACAGCCTTTGA...ACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTGTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
3UTR-3UTR CCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCGGAAGGCCAACTTCCTaGGGTCTGGAAGGCCAAAGG +
Preference number: 2 (lower is better)
Translates to: TGVASAGLSQLPEIMANGGRPTS*GLEGQR
Trigger: CCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCC...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGTCCTGGGCCAGCTGTTaGTCACGTGGGGATCCAGCT +
Preference number: 2 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWSWASC*SRGDPA
Trigger: AGCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGA...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp TGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCCCGTCTTGGCACCATATaGAGCTGGAGTGAGCCCTCA +
Preference number: 2 (lower is better)
Translates to: CGLQVLQHQGSPTGTGVARLGTI*SWSEPS
Trigger: TGAGGGCTCACTCCAGCTTCATATGGTGCCAAGACG...GGCCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGCCTCAGCCAGCTCCCTaGAATCATGGCCAATGGCAG +
Preference number: 2 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQPQPAP*NHGQWQ
Trigger: CTGCCATTGGCCATGATTTCAGGGAGCTGGCTGAGG...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCAGAGGAAACTCTGGGTaGTCCGAGGTGGGTTTGAGA +
Preference number: 2 (lower is better)
Translates to: TGVASAGLSQLPEIMANGRGNSG*SEVGLR
Trigger: TCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCT...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGCGTCTTGGCACCATATaGAGCTGGAGTGAGCCCTCA +
Preference number: 2 (lower is better)
Translates to: GKANFLGSGRPKESKLEGRLGTI*SWSEPS
Trigger: TGAGGGCTCACTCCAGCTTCATATGGTGCCAAGACG...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGTCCTGGGCCAGCTGTTaGTCACGTGGGGATCCAGCT +
Preference number: 2 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLSWASC*SRGDPA
Trigger: AGCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGA...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp CCTGGGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGCAGCTGGGTTTTCCCTaGAGCGTTCCTGGAGACTTA +
Preference number: 2 (lower is better)
Translates to: PGPKIPSPGYRRFWLQAQQLGFP*SVPGDL
Trigger: TAAGTCTCCAGGAACGCTGCAGGGAAAACCCAGCTG...CTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR CCA 90 bp TGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCCACCAAGAGGAAACTCTaGGTGGTCCGAGGTGGGTTT +
Preference number: 2 (lower is better)
Translates to: CGLQVLQHQGSPTGTGVATKRKL*VVRGGF
Trigger: AAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGT...GGCCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GGAGAGAGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTTCATGGTGATGGAGTaGGCAGAGCACCCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: GERLCVWFTSAAAPGKPHFMVME*AEHPAF
Trigger: GAAGGCAGGGTGCTCTGCCCACTCCATCACCATGAA...GTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCTCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGCCATTTCATGGTGATGGAGTaGGCAGAGCACCCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: GPKSLLLGTVVSGSRLSHFMVME*AEHPAF
Trigger: GAAGGCAGGGTGCTCTGCCCACTCCATCACCATGAA...ATGGCTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR CCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCAGGTCTTTGACTTGCTaGGATGAGACTGAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: TGVASAGLSQLPEIMANGRSLTC*DETERL
Trigger: CAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCT...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGTCCCTGCAGCGTTCCTaGAGACTTAAGAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQSLQRS*RLKRAG
Trigger: TCCTGCCCTCTTAAGTCTCCAGGAACGCTGCAGGGA...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTAGGCCCAGGCCTCAGCTaGGTTTTCCCTGCAGCGTTC +
Preference number: 2 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLGPGLS*VFPAAF
Trigger: GAACGCTGCAGGGAAAACCCAGCTGAGGCCTGGGCC...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGGGAAGGCCAACTTCCTaGGGTCTGGAAGGCCAAAGG +
Preference number: 2 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVGRPTS*GLEGQR
Trigger: CCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCC...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCCACTGGCACAGGTGTaGCCTCAGCCGGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: REKFPSALISVWAREIWWPLAQV*PQPASA
Trigger: GGCTGAGGCCGGCTGAGGCCACACCTGTGCCAGTGG...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCCCACTGGCACAGGTGTaGCCTCAGCCGGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: ACREKFPSALISVWAREIPLAQV*PQPASA
Trigger: GGCTGAGGCCGGCTGAGGCCACACCTGTGCCAGTGG...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CAA 90 bp CTGGGTTTTCCCTGCAGCGTTCCTGGAGACTTAAGAGGGCAGGACTaGGCCAGGAGGTCTTTGACTTGCTGGGATGAGACTGAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: LGFPCSVPGDLRGQD*ARRSLTCWDETERL
Trigger: CAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTGCAGGGAAAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTTCCCAGGCTTCATGGTaGTGGAGTGGGCAGAGCACC +
Preference number: 2 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTSQASW*WSGQST
Trigger: GGTGCTCTGCCCACTCCATCACCATGAAGCCTGGGA...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGCCTCAGCCAGCTCCCTaGAATCATGGCCAATGGCAG +
Preference number: 2 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWPQPAP*NHGQWQ
Trigger: CTGCCATTGGCCATGATTTCAGGGAGCTGGCTGAGG...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGTCCCCAGAAGGGCACTaGGGCCATCAATCCAGATGC +
Preference number: 2 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWSPEGH*GHQSRC
Trigger: GCATCTGGATTGATGGCCTCAGTGCCCTTCTGGGGA...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR GCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCATGAGACTGAGCGCTTaGAGGGAGAAATTTCCGTCT +
Preference number: 2 (lower is better)
Translates to: TGVASAGLSQLPEIMANGMRLSA*REKFPS
Trigger: AGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTCAT...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGAGGAGGTCTTTGACTTaGTGGGATGAGACTGAGCGC +
Preference number: 2 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQRRSLT*WDETER
Trigger: GCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCT...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GGAGAGAGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACAGAGGAAACTCTGGGTaGTCCGAGGTGGGTTTGAGA +
Preference number: 2 (lower is better)
Translates to: GERLCVWFTSAAAPGKPHRGNSG*SEVGLR
Trigger: TCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCT...GTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCTCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGAGGAAACTCTGGGTaGTCCGAGGTGGGTTTGAGA +
Preference number: 2 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHRGNSG*SEVGLR
Trigger: TCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCT...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGACCAAGAGGAAACTCTaGGTGGTCCGAGGTGGGTTT +
Preference number: 2 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWTKRKL*VVRGGF
Trigger: AAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGT...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGTTTGTTCCTCGTaGCCCAATCCCAGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: GKANFLGSGRPKESKLEGAVCSS*PNPRLH
Trigger: ATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGC...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCCAGGGTCATACAGGATaGAGAAGGCCAATTCCAACA +
Preference number: 2 (lower is better)
Translates to: TGVASAGLSQLPEIMANGQGHTG*RRPIPT
Trigger: TGTTGGAATTGGCCTTCTCCATCCTGTATGACCCTG...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR TCA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGGGTCCGAGGTGGGTTTaGGAAATGGCTGGCATTTAC +
Preference number: 2 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVGPRWV*EMAGIY
Trigger: GTAAATGCCAGCCATTTCTCAAACCCACCTCGGACC...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCTCCCAGGCTTCATGGTaGTGGAGTGGGCAGAGCACC +
Preference number: 2 (lower is better)
Translates to: SVCSDICMGQRDLVALKTSQASW*WSGQST
Trigger: GGTGCTCTGCCCACTCCATCACCATGAAGCCTGGGA...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGAGAAGGCAAGGGCATCTaGTGTTTGTTCCTCGTGGCC +
Preference number: 2 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGEGKGI*CLFLVA
Trigger: GGCCACGAGGAACAAACAGCAGATGCCCTTGCCTTC...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTAACACACCTGTCCTCTaGAGGCAGCCTTTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTNTPVL*RQPFLG
Trigger: GCCCAGGAAAGGCTGCCTGCAGAGGACAGGTGTGTT...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCGGAGAAATTTCCGTCTaGTCTGATATCTGTATGGGC +
Preference number: 2 (lower is better)
Translates to: TGVASAGLSQLPEIMANGGEISV*SDICMG
Trigger: GCCCATACAGATATCAGAGCAGACGGAAATTTCTCC...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGAGCAGTTTCTTGGACTaGAAGGCAAGGGCATCTGCT +
Preference number: 2 (lower is better)
Translates to: GKANFLGSGRPKESKLEGSSFLD*KARASA
Trigger: AGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCT...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACGCTCTGATATCTGTATaGGCCAGAGAGATCTGGTGG +
Preference number: 2 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHALISV*AREIWW
Trigger: CCACCAGATCTCTCTGGCCCATACAGATATCAGAGC...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGAGGTCTTTGACTTGCTaGGATGAGACTGAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: GKANFLGSGRPKESKLEGRSLTC*DETERL
Trigger: CAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCT...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTCTTTGACTTGCTaGGATGAGACTGAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHRSLTC*DETERL
Trigger: CAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCT...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GGAGAGAGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACAGGTCTTTGACTTGCTaGGATGAGACTGAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: GERLCVWFTSAAAPGKPHRSLTC*DETERL
Trigger: CAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCT...GTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGCAAAGGAAAGCAAACTaGAGGGGGCTGCAATTCAGG +
Preference number: 2 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQQRKAN*RGLQFR
Trigger: CCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTG...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCAAAGGAAAGCAAACTaGAGGGGGCTGCAATTCAGG +
Preference number: 2 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWQRKAN*RGLQFR
Trigger: CCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTG...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGAGCACCCTGCCTTCATaGCTCTTAGTAGACAGGGAC +
Preference number: 2 (lower is better)
Translates to: ANGRNHSTRKGRPTSWGLSTLPS*LLVDRD
Trigger: GTCCCTGTCTACTAAGAGTCATGAAGGCAGGGTGCT...CAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATCCCAGGCTTCATGGTaGTGGAGTGGGCAGAGCACC +
Preference number: 2 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPSQASW*WSGQST
Trigger: GGTGCTCTGCCCACTCCATCACCATGAAGCCTGGGA...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTTCCCAGGCTTCATGGTaGTGGAGTGGGCAGAGCACC +
Preference number: 2 (lower is better)
Translates to: WSEVGLRNGWHLLATKITSQASW*WSGQST
Trigger: GGTGCTCTGCCCACTCCATCACCATGAAGCCTGGGA...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCTCAGGAGGAAAAGGTaGGTGGCTGTTGTTAAATCC +
Preference number: 2 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWLRRKR*VAVVKS
Trigger: GGATTTAACAACAGCCACTCACCTTTTCCTCCTGAG...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGAATTTCCGTCTGCTCTaGTATCTGTATGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: GKANFLGSGRPKESKLEGNFRLL*YLYGPE
Trigger: CTCTGGCCCATACAGATATCAGAGCAGACGGAAATT...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGAAGGCAAGGGCATCTaGTGTTTGTTCCTCGTGGCC +
Preference number: 2 (lower is better)
Translates to: MAETIALGREGQLPGVWKEGKGI*CLFLVA
Trigger: GGCCACGAGGAACAAACAGCAGATGCCCTTGCCTTC...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATCCTGGGCCAGCTGTTaGTCACGTGGGGATCCAGCT +
Preference number: 2 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPSWASC*SRGDPA
Trigger: AGCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGA...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGATGAGACTGAGCGCTTaGAGGGAGAAATTTCCGTCT +
Preference number: 2 (lower is better)
Translates to: GKANFLGSGRPKESKLEGMRLSA*REKFPS
Trigger: AGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTCAT...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGCAGCTGGGTTTTCCCTaGAGCGTTCCTGGAGACTTA +
Preference number: 2 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWQLGFP*SVPGDL
Trigger: TAAGTCTCCAGGAACGCTGCAGGGAAAACCCAGCTG...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGCAGCTGGGTTTTCCCTaGAGCGTTCCTGGAGACTTA +
Preference number: 2 (lower is better)
Translates to: ANGRNHSTRKGRPTSWGLQLGFP*SVPGDL
Trigger: TAAGTCTCCAGGAACGCTGCAGGGAAAACCCAGCTG...CAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CCTGGGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGGGTTTGAGAAATGGCTaGCATTTACTGGCCACCAAA +
Preference number: 2 (lower is better)
Translates to: PGPKIPSPGYRRFWLQAQGLRNG*HLLATK
Trigger: TTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC...CTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR CCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGACCAAGAGGAAACTCTaGGTGGTCCGAGGTGGGTTT +
Preference number: 2 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLTKRKL*VVRGGF
Trigger: AAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGT...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGAGCAGTTTCTTGGACTaGAAGGCAAGGGCATCTGCT +
Preference number: 2 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWSSFLD*KARASA
Trigger: AGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCT...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTAGGTCCGAGGTGGGTTTaGGAAATGGCTGGCATTTAC +
Preference number: 2 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLGPRWV*EMAGIY
Trigger: GTAAATGCCAGCCATTTCTCAAACCCACCTCGGACC...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTAACACACCTGTCCTCTaGAGGCAGCCTTTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: WSEVGLRNGWHLLATKITNTPVL*RQPFLG
Trigger: GCCCAGGAAAGGCTGCCTGCAGAGGACAGGTGTGTT...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGACAAAATCCCTTCTCCTaGGTACCGTCGTTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGQNPFS*VPSFLA
Trigger: AGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTG...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGCAAAATCCCTTCTCCTaGGTACCGTCGTTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWQNPFS*VPSFLA
Trigger: AGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTG...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGACCAAGAGGAAACTCTaGGTGGTCCGAGGTGGGTTT +
Preference number: 2 (lower is better)
Translates to: MAETIALGREGQLPGVWKTKRKL*VVRGGF
Trigger: AAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGT...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCTGTTTGTTCCTCGTaGCCCAATCCCAGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: MAETIALGREGQLPGVWKAVCSS*PNPRLH
Trigger: ATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGC...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGGAAGCAGCAACGTCTTaGCACCATATGAAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLEAATS*HHMKLE
Trigger: CTCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTC...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATGAAGCAGCAACGTCTTaGCACCATATGAAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: PGDLRGQDLARRSLTCWDEAATS*HHMKLE
Trigger: CTCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTC...ATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGCAAAGGAAAGCAAACTaGAGGGGGCTGCAATTCAGG +
Preference number: 2 (lower is better)
Translates to: ANGRNHSTRKGRPTSWGLQRKAN*RGLQFR
Trigger: CCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTG...CAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCGGAAGGCCAACTTCCTaGGGTCTGGAAGGCCAAAGG +
Preference number: 2 (lower is better)
Translates to: ACREKFPSALISVWAREIGRPTS*GLEGQR
Trigger: CCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCC...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCAACACTCAGAACCCTaGAAGGTCACGATCCATGAC +
Preference number: 2 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLQHSEP*KVTIHD
Trigger: GTCATGGATCGTGACCTTCCAGGGTTCTGAGTGTTG...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR TCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGTCCGAGGTGGGTTTaGGAAATGGCTGGCATTTAC +
Preference number: 2 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLEGPRWV*EMAGIY
Trigger: GTAAATGCCAGCCATTTCTCAAACCCACCTCGGACC...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTCGTCTTGGCACCATATaGAGCTGGAGTGAGCCCTCA +
Preference number: 2 (lower is better)
Translates to: WSEVGLRNGWHLLATKITRLGTI*SWSEPS
Trigger: TGAGGGCTCACTCCAGCTTCATATGGTGCCAAGACG...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGGTGGGTTTGAGAAATaGCTGGCATTTACTGGCCAC +
Preference number: 2 (lower is better)
Translates to: MAETIALGREGQLPGVWKGGFEK*LAFTGH
Trigger: GTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGAGGAAACTCTGGGTaGTCCGAGGTGGGTTTGAGA +
Preference number: 2 (lower is better)
Translates to: SVCSDICMGQRDLVALKTRGNSG*SEVGLR
Trigger: TCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCT...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTTCATGGTGATGGAGTaGGCAGAGCACCCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: ACREKFPSALISVWAREIFMVME*AEHPAF
Trigger: GAAGGCAGGGTGCTCTGCCCACTCCATCACCATGAA...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATTCATGGTGATGGAGTaGGCAGAGCACCCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPFMVME*AEHPAF
Trigger: GAAGGCAGGGTGCTCTGCCCACTCCATCACCATGAA...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCGCTGTTTGTTCCTCGTaGCCCAATCCCAGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: ETERLQGEISVCSDICMGAVCSS*PNPRLH
Trigger: ATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGC...GCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTTCCCTGCAGCGTTCCTaGAGACTTAAGAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: WSEVGLRNGWHLLATKITSLQRS*RLKRAG
Trigger: TCCTGCCCTCTTAAGTCTCCAGGAACGCTGCAGGGA...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGTCCCTGCAGCGTTCCTaGAGACTTAAGAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: REKFPSALISVWAREIWWSLQRS*RLKRAG
Trigger: TCCTGCCCTCTTAAGTCTCCAGGAACGCTGCAGGGA...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTCAACTTCCTGGGGTCTaGAAGGCCAAAGGAAAGCAA +
Preference number: 2 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTQLPGV*KAKGKQ
Trigger: TTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTG...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAACCAGTCTTAGACTCTaGTTTAGACAAGATGGGTAT +
Preference number: 2 (lower is better)
Translates to: WASCCSRGDPADQRAGSGTSLRL*FRQDGY
Trigger: ATACCCATCTTGTCTAAACCAGAGTCTAAGACTGGT...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR TCA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGCTCAGGAGGAAAAGGTaGGTGGCTGTTGTTAAATCC +
Preference number: 2 (lower is better)
Translates to: MAETIALGREGQLPGVWKLRRKR*VAVVKS
Trigger: GGATTTAACAACAGCCACTCACCTTTTCCTCCTGAG...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp GGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGCCATGGTTCAGCTCATAAATaGAAAGCAATGACTGCATCA +
Preference number: 2 (lower is better)
Translates to: GPKSLLLGTVVSGSRLSHGSAHK*KAMTAS
Trigger: TGATGCAGTCATTGCTTTTCATTTATGAGCTGAACC...ATGGCTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR GCA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTGAAGGCAAGGGCATCTaGTGTTTGTTCCTCGTGGCC +
Preference number: 2 (lower is better)
Translates to: LKSWPMAETIALGREGQLEGKGI*CLFLVA
Trigger: GGCCACGAGGAACAAACAGCAGATGCCCTTGCCTTC...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATAACACACCTGTCCTCTaGAGGCAGCCTTTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: EVGLRNGWHLLATKITTDNTPVL*RQPFLG
Trigger: GCCCAGGAAAGGCTGCCTGCAGAGGACAGGTGTGTT...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTATGAGACTGAGCGCTTaGAGGGAGAAATTTCCGTCT +
Preference number: 2 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTMRLSA*REKFPS
Trigger: AGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTCAT...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp GCCACAAGTGTGGCTGGAGATGAGGCCCAGCATAAATCAACCTTAACTTACCCAAGGAGGTCTTTGACTTaGTGGGATGAGACTGAGCGC +
Preference number: 2 (lower is better)
Translates to: ATSVAGDEAQHKSTLTYPRRSLT*WDETER
Trigger: GCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCT...TGGGTAAGTTAAGGTTGATTTATGCTGGGCCTCATCTCCAGCCACACTTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR GCA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACCTTCAGCTAATAAACTaGAAAGGAAAAGATGGTGGG +
Preference number: 2 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHLQLIN*KGKDGG
Trigger: CCCACCATCTTTTCCTTTGCAGTTTATTAGCTGAAG...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR CCA 90 bp CCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATGGTTTGAGAAATGGCTaGCATTTACTGGCCACCAAA +
Preference number: 2 (lower is better)
Translates to: PGDLRGQDLARRSLTCWDGLRNG*HLLATK
Trigger: TTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC...ATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGAGGTTTGAGAAATGGCTaGCATTTACTGGCCACCAAA +
Preference number: 2 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGGLRNG*HLLATK
Trigger: TTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCAAGAGGAAACTCTGGGTaGTCCGAGGTGGGTTTGAGA +
Preference number: 2 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPRGNSG*SEVGLR
Trigger: TCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCT...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGACCAAGAGGAAACTCTaGGTGGTCCGAGGTGGGTTT +
Preference number: 2 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLTKRKL*VVRGGF
Trigger: AAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGT...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCAGCTGTTTGTTCCTCGTaGCCCAATCCCAGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPAVCSS*PNPRLH
Trigger: ATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGC...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAAGCAGTTTCTTGGACTaGAAGGCAAGGGCATCTGCT +
Preference number: 2 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLESSFLD*KARASA
Trigger: AGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCT...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGGGAGGAAAAGGTGAGTaGCTGTTGTTAAATCCATTT +
Preference number: 2 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWGGKGE*LLLNPF
Trigger: AAATGGATTTAACAACAGCCACTCACCTTTTCCTCC...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCGAAGCAGCAACGTCTTaGCACCATATGAAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: SVCSDICMGQRDLVALKTEAATS*HHMKLE
Trigger: CTCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTC...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGAAAAGGTATTAATGTaGGGGAAGAGCAGTAGAATC +
Preference number: 2 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQEKVLM*GKSSRI
Trigger: GATTCTACTGCTCTTCCCCCACATTAATACCTTTTC...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CAGAAGGGCACTGAGGCCATCAATCCAGATGCAGTACTCATATTTATTAGGTGCGGAAGGCCAACTTCCTaGGGTCTGGAAGGCCAAAGG +
Preference number: 2 (lower is better)
Translates to: QKGTEAINPDAVLIFIRCGRPTS*GLEGQR
Trigger: CCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCC...GCACCTAATAAATATGAGTACTGCATCTGGATTGATGGCCTCAGTGCCCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR CCA 90 bp GGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGCCATGTGCTAATGGACTGGTaGCAATGTTATACACTATAC +
Preference number: 2 (lower is better)
Translates to: GPKSLLLGTVVSGSRLSHVLMDW*QCYTLY
Trigger: GTATAGTGTATAACATTGCCACCAGTCCATTAGCAC...ATGGCTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR CAA 90 bp AGTAGACAGGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTaGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGAT +
Preference number: 2 (lower is better)
Translates to: SRQGPRGNSGWSEVG*RNGWHLLATKITTD
Trigger: ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCCTGTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGAAGGCAAGGGCATCTaGTGTTTGTTCCTCGTGGCC +
Preference number: 2 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEAEGKGI*CLFLVA
Trigger: GGCCACGAGGAACAAACAGCAGATGCCCTTGCCTTC...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATGAAGGCAAGGGCATCTaGTGTTTGTTCCTCGTGGCC +
Preference number: 2 (lower is better)
Translates to: EVGLRNGWHLLATKITTDEGKGI*CLFLVA
Trigger: GGCCACGAGGAACAAACAGCAGATGCCCTTGCCTTC...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp CAGCAGTACCTGCACAGTAAGCACTCAATAAACCACAGTGAGTCTTCTAATGCTCAGGGATTCTCCAGGTaGCAGCCAGCTGTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: QQYLHSKHSINHSESSNAQGFSR*QPAVKG
Trigger: GCCTTTGACAGCTGGCTGGCACCTGGAGAATCCCTG...AGCATTAGAAGACTCACTGTGGTTTATTGAGTGCTTACTGTGCAGGTACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425546.5
3UTR-3UTR GCA 90 bp CCGAGGGATAACTATCGATTAAGTACCCAGGGTGTGCACATCATGCCAGTCCACTTCTGCAGACCAAGCTaGTTTTCCAGCTCAGGGATT +
Preference number: 2 (lower is better)
Translates to: PRDNYRLSTQGVHIMPVHFCRPS*FSSSGI
Trigger: AATCCCTGAGCTGGAAAAGCAGCTTGGTCTGCAGAA...GTGGACTGGCATGATGTGCACACCCTGGGTACTTAATCGATAGTTATCCCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
3UTR-3UTR GCA 90 bp CCGAGGGATAACTATCGATTAAGTACCCAGGGTGTGCACATCATGCCAGTCCACCTTGTGACTCAGTTCTaGAGACCAAGCTGCTTTTCC +
Preference number: 2 (lower is better)
Translates to: PRDNYRLSTQGVHIMPVHLVTQF*RPSCFS
Trigger: GGAAAAGCAGCTTGGTCTGCAGAACTGAGTCACAAG...GTGGACTGGCATGATGTGCACACCCTGGGTACTTAATCGATAGTTATCCCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
3UTR-3UTR GCA 90 bp CACTCAATAAACCACAGTGAGTCTTCTAATGCTTATCCTCCTGACCTCTCTGGAGCTGAGGCTCCCCAGTaGCTCAGTCTTGTGACTCAG +
Preference number: 2 (lower is better)
Translates to: HSINHSESSNAYPPDLSGAEAPQ*LSLVTQ
Trigger: CTGAGTCACAAGACTGAGGCACTGGGGAGCCTCAGC...TCCAGAGAGGTCAGGAGGATAAGCATTAGAAGACTCACTGTGGTTTATTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
3UTR-3UTR CCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGGGTGGGTTTGAGAAATaGCTGGCATTTACTGGCCAC +
Preference number: 2 (lower is better)
Translates to: REKFPSALISVWAREIWWGGFEK*LAFTGH
Trigger: GTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCAGGTGGGTTTGAGAAATaGCTGGCATTTACTGGCCAC +
Preference number: 2 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPGGFEK*LAFTGH
Trigger: GTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGGCTCTGATATCTGTATaGGCCAGAGAGATCTGGTGG +
Preference number: 2 (lower is better)
Translates to: REKFPSALISVWAREIWWALISV*AREIWW
Trigger: CCACCAGATCTCTCTGGCCCATACAGATATCAGAGC...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCAAAGGAAAGCAAACTaGAGGGGGCTGCAATTCAGG +
Preference number: 2 (lower is better)
Translates to: REKFPSALISVWAREIWWQRKAN*RGLQFR
Trigger: CCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTG...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCGAGAGGCTGTGTGTGTaGTTTACAAGTGCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: ACREKFPSALISVWAREIERLCV*FTSAAA
Trigger: TGCTGCAGCACTTGTAAACCACACACACAGCCTCTC...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGTGTGTGCTAATGGACTaGTGGCAATGTTATACACTA +
Preference number: 2 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVCVLMD*WQCYTL
Trigger: TAGTGTATAACATTGCCACCAGTCCATTAGCACACA...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR TCA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGGTCCGAGGTGGGTTTaGGAAATGGCTGGCATTTAC +
Preference number: 2 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEAGPRWV*EMAGIY
Trigger: GTAAATGCCAGCCATTTCTCAAACCCACCTCGGACC...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR TCA 90 bp AACTATCGATTAAGTACCCAGGGTGTGCACATCATGCCAGTCCACTCTTCTCTCAGTGCCTCAGTCTTGTaGCTCAGTTCTGCAGACCAA +
Preference number: 2 (lower is better)
Translates to: NYRLSTQGVHIMPVHSSLSASVL*LSSADQ
Trigger: TTGGTCTGCAGAACTGAGTCACAAGACTGAGGCACT...GAGAGAAGAGTGGACTGGCATGATGTGCACACCCTGGGTACTTAATCGATAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425546.5
3UTR-3UTR GCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGAGAAATTTCCGTCTaGTCTGATATCTGTATGGGC +
Preference number: 2 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLEGEISV*SDICMG
Trigger: GCCCATACAGATATCAGAGCAGACGGAAATTTCTCC...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCGGTTTGAGAAATGGCTaGCATTTACTGGCCACCAAA +
Preference number: 2 (lower is better)
Translates to: ETERLQGEISVCSDICMGGLRNG*HLLATK
Trigger: TTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC...GCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCGGTTTGAGAAATGGCTaGCATTTACTGGCCACCAAA +
Preference number: 2 (lower is better)
Translates to: SVCSDICMGQRDLVALKTGLRNG*HLLATK
Trigger: TTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAAAGGTATTAATGTaGGGGAAGAGCAGTAGAATC +
Preference number: 2 (lower is better)
Translates to: ANGRNHSTRKGRPTSWGLEKVLM*GKSSRI
Trigger: GATTCTACTGCTCTTCCCCCACATTAATACCTTTTC...CAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CAA 90 bp CCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTaGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTGGAAGGCAA +
Preference number: 2 (lower is better)
Translates to: PADQRAGSGGKGEWL*LNPFQEAVSWTGRQ
Trigger: TTGCCTTCCAGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR GCA 90 bp GCCACAAGTGTGGCTGGAGATGAGGCCCAGCATAAATCAACCTTAACTTACCCAGGAGAAATTTCCGTCTaGTCTGATATCTGTATGGGC +
Preference number: 2 (lower is better)
Translates to: ATSVAGDEAQHKSTLTYPGEISV*SDICMG
Trigger: GCCCATACAGATATCAGAGCAGACGGAAATTTCTCC...TGGGTAAGTTAAGGTTGATTTATGCTGGGCCTCATCTCCAGCCACACTTGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR CCA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCACAAAATCCCTTCTCCTaGGTACCGTCGTTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEAQNPFS*VPSFLA
Trigger: AGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTG...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGATGGCTGGCATTTACTaGCCACCAAAATCACTACAG +
Preference number: 2 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLMAGIY*PPKSLQ
Trigger: CTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCAT...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATGAGAGGCTGTGTGTGTaGTTTACAAGTGCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: EVGLRNGWHLLATKITTDERLCV*FTSAAA
Trigger: TGCTGCAGCACTTGTAAACCACACACACAGCCTCTC...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTGAGAGGCTGTGTGTGTaGTTTACAAGTGCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSERLCV*FTSAAA
Trigger: TGCTGCAGCACTTGTAAACCACACACACAGCCTCTC...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGACACACACACAAAATTaGTCACTGTTGCATGATACC +
Preference number: 2 (lower is better)
Translates to: MAETIALGREGQLPGVWKTHTQN*SLLHDT
Trigger: GGTATCATGCAACAGTGACCAATTTTGTGTGTGTGT...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR TCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATCAAACCTTAGTTGACTaGTGGAATGAGGCACTGAGC +
Preference number: 2 (lower is better)
Translates to: EVGLRNGWHLLATKITTDQTLVD*WNEALS
Trigger: GCTCAGTGCCTCATTCCATCAGTCAACTAAGGTTTG...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR CCA 90 bp GCGATGAAGTTTAAGGTCTCATCAGGGTCATACAGGATGGAGAAGGCCAATTCCTTTAAATTAGAGCGATaGAACAGCCTGGGGTCTGCA +
Preference number: 2 (lower is better)
Translates to: AMKFKVSSGSYRMEKANSFKLER*NSLGSA
Trigger: TGCAGACCCCAGGCTGTTCCATCGCTCTAATTTAAA...GGAATTGGCCTTCTCCATCCTGTATGACCCTGATGAGACCTTAAACTTCATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR GCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTGGAGAAATTTCCGTCTaGTCTGATATCTGTATGGGC +
Preference number: 2 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSGEISV*SDICMG
Trigger: GCCCATACAGATATCAGAGCAGACGGAAATTTCTCC...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTGGAGGAAAAGGTGAGTaGCTGTTGTTAAATCCATTT +
Preference number: 2 (lower is better)
Translates to: WSEVGLRNGWHLLATKITGGKGE*LLLNPF
Trigger: AAATGGATTTAACAACAGCCACTCACCTTTTCCTCC...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCAGGAGGAAAAGGTGAGTaGCTGTTGTTAAATCCATTT +
Preference number: 2 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPGGKGE*LLLNPF
Trigger: AAATGGATTTAACAACAGCCACTCACCTTTTCCTCC...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp GGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTCAAAATCCCTTCTCCTaGGTACCGTCGTTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: GKGEWLLLNPFQEAVSWTQNPFS*VPSFLA
Trigger: AGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTG...AGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CCA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTGGAGGAAAAGGTGAGTaGCTGTTGTTAAATCCATTT +
Preference number: 2 (lower is better)
Translates to: LKSWPMAETIALGREGQLGGKGE*LLLNPF
Trigger: AAATGGATTTAACAACAGCCACTCACCTTTTCCTCC...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 72 bp TGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTaGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCA +
Preference number: 3 (lower is better)
Translates to: CCSTREAPLAQV*PQPASASSLKS
Trigger: TGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 72 bp GCCCAGGCCTCAGCTGGGTTTTCCCTGCAGCGTTCCTaGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTC +
Preference number: 3 (lower is better)
Translates to: AQASAGFSLQRS*RLKRAGLGQEV
Trigger: GACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTGCAGGGAAAACCCAGCTGAGGCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp GGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGCCATAAGGGCATCTGCTGTTaGTTCCTCGTGGCCCAATCC +
Preference number: 3 (lower is better)
Translates to: GPKSLLLGTVVSGSRLSHKGICC*FLVAQS
Trigger: GGATTGGGCCACGAGGAACAAACAGCAGATGCCCTT...ATGGCTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR CAA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGTTCCTGGGCCAGCTGTaGCTCACGTGGGGATCCAGC +
Preference number: 3 (lower is better)
Translates to: MAETIALGREGQLPGVWKFLGQL*LTWGSS
Trigger: GCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGAA...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR GCA 72 bp AGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTaGCTCAGTCTTGTGACTCAGTTCTGCAGACCAAGC +
Preference number: 3 (lower is better)
Translates to: REQQPDGAEAPQ*LSLVTQFCRPS
Trigger: GCTTGGTCTGCAGAACTGAGTCACAAGACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
3UTR CCA 72 bp ATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTaGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: IALGREGQLPGV*KAKGKQTGGGC
Trigger: GCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGTGGTCCGAGGTGGGTTaGAGAAATGGCTGGCATTTA +
Preference number: 3 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQWSEVG*RNGWHL
Trigger: TAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACTGGTCCGAGGTGGGTTaGAGAAATGGCTGGCATTTA +
Preference number: 3 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHWSEVG*RNGWHL
Trigger: TAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp CCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATAAGGGCATCTGCTGTTaGTTCCTCGTGGCCCAATCC +
Preference number: 3 (lower is better)
Translates to: PGDLRGQDLARRSLTCWDKGICC*FLVAQS
Trigger: GGATTGGGCCACGAGGAACAAACAGCAGATGCCCTT...ATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGAAGGGCATCTGCTGTTaGTTCCTCGTGGCCCAATCC +
Preference number: 3 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWKGICC*FLVAQS
Trigger: GGATTGGGCCACGAGGAACAAACAGCAGATGCCCTT...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGATTCCTGGGCCAGCTGTaGCTCACGTGGGGATCCAGC +
Preference number: 3 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGFLGQL*LTWGSS
Trigger: GCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGAA...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGTTCCTGGGCCAGCTGTaGCTCACGTGGGGATCCAGC +
Preference number: 3 (lower is better)
Translates to: REKFPSALISVWAREIWWFLGQL*LTWGSS
Trigger: GCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGAA...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGAAGCAGCAACGTCTaGGCACCATATGAAGCTGGA +
Preference number: 3 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHRSSNV*APYEAG
Trigger: TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCT...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 72 bp AGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTaGGATGAGACTGAGCGCTTGCAGGGAGAAATTTCC +
Preference number: 3 (lower is better)
Translates to: RGQDLARRSLTC*DETERLQGEIS
Trigger: GGAAATTTCTCCCTGCAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGTGGTCCGAGGTGGGTTaGAGAAATGGCTGGCATTTA +
Preference number: 3 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWWSEVG*RNGWHL
Trigger: TAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTAAGGGCATCTGCTGTTaGTTCCTCGTGGCCCAATCC +
Preference number: 3 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTKGICC*FLVAQS
Trigger: GGATTGGGCCACGAGGAACAAACAGCAGATGCCCTT...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGTCAAGAAGCAGTTTCTaGGACTGGAAGGCAAGGGCA +
Preference number: 3 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVSRSSF*DWKARA
Trigger: TGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGA...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTTTCCTGGGCCAGCTGTaGCTCACGTGGGGATCCAGC +
Preference number: 3 (lower is better)
Translates to: LKSWPMAETIALGREGQLFLGQL*LTWGSS
Trigger: GCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGAA...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR TCA 72 bp GGACGGGAGGGACAGGTGCTAACTTCAATGGACAAATaGGGGCCTACGGCACCAAGTGGAAGACAAGCTCAA +
Preference number: 3 (lower is better)
Translates to: GREGQVLTSMDK*GPTAPSGRQAQ
Trigger: TTGAGCTTGTCTTCCACTTGGTGCCGTAGGCCCTCATTTGTCCATTGAAGTTAGCACCTGTCCCTCCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
3UTR-3UTR CAA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGTCAAGAAGCAGTTTCTaGGACTGGAAGGCAAGGGCA +
Preference number: 3 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWSRSSF*DWKARA
Trigger: TGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGA...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGTCAAGAAGCAGTTTCTaGGACTGGAAGGCAAGGGCA +
Preference number: 3 (lower is better)
Translates to: ANGRNHSTRKGRPTSWGLSRSSF*DWKARA
Trigger: TGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGA...CAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR GCA 72 bp AAGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTaGTGTTTGTTCCTCGTGGCCCAATCCCAGGCTTCA +
Preference number: 3 (lower is better)
Translates to: KKQFLGLEGKGI*CLFLVAQSQAS
Trigger: TGAAGCCTGGGATTGGGCCACGAGGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR GCA 72 bp TTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTaGTGGGATGAGACTGAGCGCTTGCAGGGAGAAATT +
Preference number: 3 (lower is better)
Translates to: LRGQDLARRSLT*WDETERLQGEI
Trigger: AATTTCTCCCTGCAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp AGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTGTTCCTCGTGGTGGTCCGAGGTGGGTTaGAGAAATGGCTGGCATTTA +
Preference number: 3 (lower is better)
Translates to: RSSFLDWKARASAVCSSWWSEVG*RNGWHL
Trigger: TAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA...CCACGAGGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGAAGCAGCAACGTCTaGGCACCATATGAAGCTGGA +
Preference number: 3 (lower is better)
Translates to: SVCSDICMGQRDLVALKTRSSNV*APYEAG
Trigger: TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCT...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGATAGTACACTCTTCATaGGGTAGTACCTACCATGCC +
Preference number: 3 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLIVHSS*GSTYHA
Trigger: GGCATGGTAGGTACTACCCAATGAAGAGTGTACTAT...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR TCA 72 bp GACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTaGGAAATGGCTGGCATTTACTGGCCACCAAAATCA +
Preference number: 3 (lower is better)
Translates to: DQEETLGGPRWV*EMAGIYWPPKS
Trigger: TGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR GCA 72 bp GATGAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTaGTCTGATATCTGTATGGGCCAGAGAGATCTGGTG +
Preference number: 3 (lower is better)
Translates to: DETERLQGEISV*SDICMGQRDLV
Trigger: CACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 72 bp AACACTCGACCCCTAGATGATCAGCTTTTGAGGGCCTaGCACAACAGTGCTCTGCATAGAGTGAGGACTGAA +
Preference number: 3 (lower is better)
Translates to: NTRPLDDQLLRA*HNSALHRVRTE
Trigger: TTCAGTCCTCACTCTATGCAGAGCACTGTTGTGCCAGGCCCTCAAAAGCTGATCATCTAGGGGTCGAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
3UTR-3UTR CAA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATGGTCCGAGGTGGGTTaGAGAAATGGCTGGCATTTA +
Preference number: 3 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPWSEVG*RNGWHL
Trigger: TAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTCAAGAAGCAGTTTCTaGGACTGGAAGGCAAGGGCA +
Preference number: 3 (lower is better)
Translates to: ACREKFPSALISVWAREISRSSF*DWKARA
Trigger: TGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGA...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTAGCAAAAGCCTCAGGCTaGTACTCAGATCTAAGATAC +
Preference number: 3 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLAKASG*YSDLRY
Trigger: GTATCTTAGATCTGAGTACAAGCCTGAGGCTTTTGC...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCAGAAGCAGCAACGTCTaGGCACCATATGAAGCTGGA +
Preference number: 3 (lower is better)
Translates to: ACREKFPSALISVWAREIRSSNV*APYEAG
Trigger: TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCT...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 72 bp ACTCTTAGTAGACAGGGACCAAGAGGAAACTCTGGGTaGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTA +
Preference number: 3 (lower is better)
Translates to: TLSRQGPRGNSG*SEVGLRNGWHL
Trigger: TAAATGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCCTGTCTACTAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 72 bp CACCTCCTGAAGGAGAAAGGGTTTAAATTAGAGCGATaGAACAGCCTGGGGTCTGCACATCAAGATCTTGGC +
Preference number: 3 (lower is better)
Translates to: HLLKEKGFKLER*NSLGSAHQDLG
Trigger: GCCAAGATCTTGATGTGCAGACCCCAGGCTGTTCCATCGCTCTAATTTAAACCCTTTCTCCTTCAGGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR-3UTR CAA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCGCAAAAGCCTCAGGCTaGTACTCAGATCTAAGATAC +
Preference number: 3 (lower is better)
Translates to: SVCSDICMGQRDLVALKTAKASG*YSDLRY
Trigger: GTATCTTAGATCTGAGTACAAGCCTGAGGCTTTTGC...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 72 bp AACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTaGCATTTACTGGCCACCAAAATCACTACAGATTCT +
Preference number: 3 (lower is better)
Translates to: NSGWSEVGLRNG*HLLATKITTDS
Trigger: AGAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCAAGAAGCAGTTTCTaGGACTGGAAGGCAAGGGCA +
Preference number: 3 (lower is better)
Translates to: EVGLRNGWHLLATKITTDSRSSF*DWKARA
Trigger: TGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGA...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTGCAAAAGCCTCAGGCTaGTACTCAGATCTAAGATAC +
Preference number: 3 (lower is better)
Translates to: LKSWPMAETIALGREGQLAKASG*YSDLRY
Trigger: GTATCTTAGATCTGAGTACAAGCCTGAGGCTTTTGC...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTGCAAAAGCCTCAGGCTaGTACTCAGATCTAAGATAC +
Preference number: 3 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSAKASG*YSDLRY
Trigger: GTATCTTAGATCTGAGTACAAGCCTGAGGCTTTTGC...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTATAGTACACTCTTCATaGGGTAGTACCTACCATGCC +
Preference number: 3 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSIVHSS*GSTYHA
Trigger: GGCATGGTAGGTACTACCCAATGAAGAGTGTACTAT...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 72 bp GTTGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTaGAAGGCAAGGGCATCTGCTGTTTGTTCCTCGTGG +
Preference number: 3 (lower is better)
Translates to: VVKSISRSSFLD*KARASAVCSSW
Trigger: CCACGAGGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CCA 72 bp GCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTaGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCT +
Preference number: 3 (lower is better)
Translates to: ADQRAGSGGKGE*LLLNPFQEAVS
Trigger: AGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR-3UTR CAA 90 bp CAGAAGGGCACTGAGGCCATCAATCCAGATGCAGTACTCATATTTATTAGGTGCGACGTTATGTGCCTCTaGATAGAACATAATACCACT +
Preference number: 3 (lower is better)
Translates to: QKGTEAINPDAVLIFIRCDVMCL*IEHNTT
Trigger: AGTGGTATTATGTTCTATCAAGAGGCACATAACGTC...GCACCTAATAAATATGAGTACTGCATCTGGATTGATGGCCTCAGTGCCCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
3UTR TCA 72 bp CATCAAAATATCATGAGTTTGCAAACCTTAGTTGACTaGTGGAATGAGGCACTGAGCTTCAACAGTCTGCTA +
Preference number: 3 (lower is better)
Translates to: HQNIMSLQTLVD*WNEALSFNSLL
Trigger: TAGCAGACTGTTGAAGCTCAGTGCCTCATTCCATCAGTCAACTAAGGTTTGCAAACTCATGATATTTTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGACCACTGGCACAGGTGTaGCCTCAGCCGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WASCCSRGDPADQRAGSGPLAQV*PQPASA
Trigger: GGCTGAGGCCGGCTGAGGCCACACCTGTGCCAGTGG...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGATCCCAGGCTTCATGGTaGTGGAGTGGGCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: WASCCSRGDPADQRAGSGSQASW*WSGQST
Trigger: GGTGCTCTGCCCACTCCATCACCATGAAGCCTGGGA...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCGGCTGTTCAAGACCATaGTCTCCAGGATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TGVASAGLSQLPEIMANGGCSRP*SPGWPG
Trigger: CCCTGGCCATCCTGGAGAGCATGGTCTTGAACAGCC...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CCA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGGGCCCAGGCCTCAGCTaGGTTTTCCCTGCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWGPGLS*VFPAAF
Trigger: GAACGCTGCAGGGAAAACCCAGCTGAGGCCTGGGCC...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGCCATGGCCCAGGCCTCAGCTaGGTTTTCCCTGCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: GPKSLLLGTVVSGSRLSHGPGLS*VFPAAF
Trigger: GAACGCTGCAGGGAAAACCCAGCTGAGGCCTGGGCC...ATGGCTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCCACTGGCACAGGTGTaGCCTCAGCCGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLPLAQV*PQPASA
Trigger: GGCTGAGGCCGGCTGAGGCCACACCTGTGCCAGTGG...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGATCCCCAGAAGGGCACTaGGGCCATCAATCCAGATGC +
Preference number: 4 (lower is better)
Translates to: WASCCSRGDPADQRAGSGSPEGH*GHQSRC
Trigger: GCATCTGGATTGATGGCCTCAGTGCCCTTCTGGGGA...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACTCCCAGGCTTCATGGTaGTGGAGTGGGCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHSQASW*WSGQST
Trigger: GGTGCTCTGCCCACTCCATCACCATGAAGCCTGGGA...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCTCTTTCGGAAGCTGCTaGCCTCACAGAGCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: TGVASAGLSQLPEIMANGSFGSC*PHRAGS
Trigger: TGAACCGGCTCTGTGAGGGCAGCAGCTTCCGAAAGA...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGTCCTGGGCCAGCTGTTaGTCACGTGGGGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQSWASC*SRGDPA
Trigger: AGCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGA...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCCGCCAGGGGCCGTTTCTaGTCGATTTCAAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CGLQVLQHQGSPTGTGVAARGRF*SISRSW
Trigger: CCAGCTCCTTGAAATCGACCAGAAACGGCCCCTGGC...GGCCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CCA 90 bp TGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCCCGTCGGCAGAGAGCTTaGCCAGCTCCTTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: CGLQVLQHQGSPTGTGVARRQRA*PAPSWH
Trigger: ATGCCATGAAGGAGCTGGCCAAGCTCTCTGCCGACG...GGCCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTACCACTGGCACAGGTGTaGCCTCAGCCGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLPLAQV*PQPASA
Trigger: GGCTGAGGCCGGCTGAGGCCACACCTGTGCCAGTGG...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GGAGAGAGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTCAGGCGCTGCTGCTTaGTCAGCTCAAGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: GERLCVWFTSAAAPGKPHSGAAA*SAQGSR
Trigger: CCGAGATCCTTGAGCTGATCAAGCAGCAGCGCCTGA...GTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCAGCACCCTGCCTTCATaGCTCTTAGTAGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: TGVASAGLSQLPEIMANGSTLPS*LLVDRD
Trigger: GTCCCTGTCTACTAAGAGTCATGAAGGCAGGGTGCT...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTCTTGTGCACTCGACCCCTAGATaGTCAGCTTTTGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QREQQPDGAEAPQCLSLVHSTPR*SAFEGL
Trigger: CAGGCCCTCAAAAGCTGATCATCTAGGGGTCGAGTG...CACAAGACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCAGGAGGTCTTTGACTTaGTGGGATGAGACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: TGVASAGLSQLPEIMANGRRSLT*WDETER
Trigger: GCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCT...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGGCCCAGGCCTCAGCTaGGTTTTCCCTGCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: ANGRNHSTRKGRPTSWGLGPGLS*VFPAAF
Trigger: GAACGCTGCAGGGAAAACCCAGCTGAGGCCTGGGCC...CAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGGAAGGCCAACTTCCTaGGGTCTGGAAGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GKANFLGSGRPKESKLEGGRPTS*GLEGQR
Trigger: CCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCC...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCCACTGGCACAGGTGTaGCCTCAGCCGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ETERLQGEISVCSDICMGPLAQV*PQPASA
Trigger: GGCTGAGGCCGGCTGAGGCCACACCTGTGCCAGTGG...GCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp TCACAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTCTTCACAGAGCATTTTGGTaGGCTCAATGGCACTGCGGC +
Preference number: 4 (lower is better)
Translates to: SQREQQPDGAEAPQCLSLHRAFW*AQWHCG
Trigger: GCCGCAGTGCCATTGAGCTCACCAAAATGCTCTGTG...AAGACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR TCA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGTCCCCAGAAGGGCACTaGGGCCATCAATCCAGATGC +
Preference number: 4 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVSPEGH*GHQSRC
Trigger: GCATCTGGATTGATGGCCTCAGTGCCCTTCTGGGGA...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATCCCCAGAAGGGCACTaGGGCCATCAATCCAGATGC +
Preference number: 4 (lower is better)
Translates to: GTKRKLWVVRGGFEKWLASPEGH*GHQSRC
Trigger: GCATCTGGATTGATGGCCTCAGTGCCCTTCTGGGGA...TGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATTCCCAGGCTTCATGGTaGTGGAGTGGGCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: PGDLRGQDLARRSLTCWDSQASW*WSGQST
Trigger: GGTGCTCTGCCCACTCCATCACCATGAAGCCTGGGA...ATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACCGTCTTGGCACCATATaGAGCTGGAGTGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHRLGTI*SWSEPS
Trigger: TGAGGGCTCACTCCAGCTTCATATGGTGCCAAGACG...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGCCTCAGCCAGCTCCCTaGAATCATGGCCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVPQPAP*NHGQWQ
Trigger: CTGCCATTGGCCATGATTTCAGGGAGCTGGCTGAGG...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGGGCTGTTCAAGACCATaGTCTCCAGGATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWGCSRP*SPGWPG
Trigger: CCCTGGCCATCCTGGAGAGCATGGTCTTGAACAGCC...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGCAATCTTTCGGAAGCTaGTGCCCTCACAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQQSFGS*CPHRAG
Trigger: ACCGGCTCTGTGAGGGCAGCAGCTTCCGAAAGATTG...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACGAAGGCAAGGGCATCTaGTGTTTGTTCCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHEGKGI*CLFLVA
Trigger: GGCCACGAGGAACAAACAGCAGATGCCCTTGCCTTC...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGTCCTGGGCCAGCTGTTaGTCACGTGGGGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: ANGRNHSTRKGRPTSWGLSWASC*SRGDPA
Trigger: AGCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGA...CAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AGGTCACAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTTCCTGGTTGGAGACCTaGAGGTGTGAGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RSQREQQPDGAEAPQCLSSWLET*RCEMSC
Trigger: ACAGCTCATCTCACACCTCCAGGTCTCCAACCAGGA...ACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTGTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCTCTGAATCTCCTGGTTaGAGACCTGGAGGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: TGVASAGLSQLPEIMANGSESPG*RPGGVR
Trigger: TCTCACACCTCCAGGTCTCCAACCAGGAGATTCAGA...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CCA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGATGTCACCTCCCCTTGTaGGTTGTCATCCAAGTCACC +
Preference number: 4 (lower is better)
Translates to: WASCCSRGDPADQRAGSGCHLPL*VVIQVT
Trigger: GGTGACTTGGATGACAACCCACAAGGGGAGGTGACA...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCGGTGGGTTTGAGAAATaGCTGGCATTTACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TGVASAGLSQLPEIMANGGGFEK*LAFTGH
Trigger: GTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGCTGTTTGTTCCTCGTaGCCCAATCCCAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: WASCCSRGDPADQRAGSGAVCSS*PNPRLH
Trigger: ATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGC...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGGACTGGAAGTCATCCTaGCTCATCCTCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWDWKSS*LILSDW
Trigger: CCAGTCTGAGAGGATGAGTCAGGATGACTTCCAGTC...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATTCAGGCGCTGCTGCTTaGTCAGCTCAAGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: PGDLRGQDLARRSLTCWDSGAAA*SAQGSR
Trigger: CCGAGATCCTTGAGCTGATCAAGCAGCAGCGCCTGA...ATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATCAGGCGCTGCTGCTTaGTCAGCTCAAGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGSGAAA*SAQGSR
Trigger: CCGAGATCCTTGAGCTGATCAAGCAGCAGCGCCTGA...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCCTCAGGAGGAAAAGGTaGGTGGCTGTTGTTAAATCC +
Preference number: 4 (lower is better)
Translates to: TGVASAGLSQLPEIMANGLRRKR*VAVVKS
Trigger: GGATTTAACAACAGCCACTCACCTTTTCCTCCTGAG...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CCAGTGCCTCAGTCTTGTGACTCAGTTCTGCAGACCAAGCTGCTTTTCCAGCTCTCAAAGGCTGTCGTGTaGTGGTCTCCTCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: PVPQSCDSVLQTKLLFQLSKAVV*WSPPVG
Trigger: GCCCACGGGAGGAGACCATCACACGACAGCCTTTGA...GAGCTGGAAAAGCAGCTTGGTCTGCAGAACTGAGTCACAAGACTGAGGCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCCATCAGCTGGCGTaGAGCCCGGGACGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWLHQLA*SPGRGD
Trigger: ATCTCCCCGTCCCGGGCTGCACGCCAGCTGATGGAG...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp GGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTGGCACAATCTTTCGGAAGCTaGTGCCCTCACAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GTKRKLWVVRGGFEKWLAQSFGS*CPHRAG
Trigger: ACCGGCTCTGTGAGGGCAGCAGCTTCCGAAAGATTG...TGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGGAAGGCAAGGGCATCTaGTGTTTGTTCCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWEGKGI*CLFLVA
Trigger: GGCCACGAGGAACAAACAGCAGATGCCCTTGCCTTC...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTTCCTGGGCCAGCTGTTaGTCACGTGGGGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTSWASC*SRGDPA
Trigger: AGCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGA...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGAACACACCTGTCCTCTaGAGGCAGCCTTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWNTPVL*RQPFLG
Trigger: GCCCAGGAAAGGCTGCCTGCAGAGGACAGGTGTGTT...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGAGGTCTTTGACTTaGTGGGATGAGACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHRRSLT*WDETER
Trigger: GCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCT...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GGAGAGAGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACAGGAGGTCTTTGACTTaGTGGGATGAGACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: GERLCVWFTSAAAPGKPHRRSLT*WDETER
Trigger: GCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCT...GTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCTCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGCAGCTGGGTTTTCCCTaGAGCGTTCCTGGAGACTTA +
Preference number: 4 (lower is better)
Translates to: GKANFLGSGRPKESKLEGQLGFP*SVPGDL
Trigger: TAAGTCTCCAGGAACGCTGCAGGGAAAACCCAGCTG...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCACTGATCCAAAGAGTTaGGTTTGGAGGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: TGVASAGLSQLPEIMANGTDPKS*VWRAKL
Trigger: GAGCTTTGCCCTCCAAACCCAACTCTTTGGATCAGT...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCCCTCATCCTCTCAGACTaGCGCAGTCGTAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: CGLQVLQHQGSPTGTGVALILSD*RSRRIS
Trigger: TGAGATTCTACGACTGCGCCAGTCTGAGAGGATGAG...GGCCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACACCAAGAGGAAACTCTaGGTGGTCCGAGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHTKRKL*VVRGGF
Trigger: AAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGT...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAAGCAGTTTCTTGGACTaGAAGGCAAGGGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: WASCCSRGDPADQRAGSGSSFLD*KARASA
Trigger: AGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCT...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCCAGCAGTTTCTTGGACTaGAAGGCAAGGGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: CGLQVLQHQGSPTGTGVASSFLD*KARASA
Trigger: AGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCT...GGCCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CCTGGGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGAGCAGTTTCTTGGACTaGAAGGCAAGGGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: PGPKIPSPGYRRFWLQAQSSFLD*KARASA
Trigger: AGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCT...CTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCACTGGCACAGGTGTaGCCTCAGCCGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LKSWPMAETIALGREGQLPLAQV*PQPASA
Trigger: GGCTGAGGCCGGCTGAGGCCACACCTGTGCCAGTGG...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCCGAGAGGCTGTGTGTGTaGTTTACAAGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CGLQVLQHQGSPTGTGVAERLCV*FTSAAA
Trigger: TGCTGCAGCACTTGTAAACCACACACACAGCCTCTC...GGCCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CAA 72 bp GGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTaGACTTGCTGGGATGAGACTGAGCGCTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GDLRGQDLARRS*TCWDETERLQG
Trigger: TCCCTGCAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CAA 72 bp CCCTGCAGCGTTCCTGGAGACTTAAGAGGGCAGGACTaGGCCAGGAGGTCTTTGACTTGCTGGGATGAGACT +
Preference number: 4 (lower is better)
Translates to: PCSVPGDLRGQD*ARRSLTCWDET
Trigger: AGTCTCATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCACAGAGCATTTTGGTaGGCTCAATGGCACTGCGGC +
Preference number: 4 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLHRAFW*AQWHCG
Trigger: GCCGCAGTGCCATTGAGCTCACCAAAATGCTCTGTG...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGCACAGAGCATTTTGGTaGGCTCAATGGCACTGCGGC +
Preference number: 4 (lower is better)
Translates to: ANGRNHSTRKGRPTSWGLHRAFW*AQWHCG
Trigger: GCCGCAGTGCCATTGAGCTCACCAAAATGCTCTGTG...CAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CAAGGGCATCTGCTGTTTGTTCCTCGTGGCCCAATCCCAGGCTTCATGGTGATGCACAGAGCATTTTGGTaGGCTCAATGGCACTGCGGC +
Preference number: 4 (lower is better)
Translates to: QGHLLFVPRGPIPGFMVMHRAFW*AQWHCG
Trigger: GCCGCAGTGCCATTGAGCTCACCAAAATGCTCTGTG...CATCACCATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGCAGATGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR TCA 90 bp AACTTCAATGGACAAATGAGGGCCTACGGCACCAAGTGGAAGACAAGCTCAAGGACAACCAGATGGGGCTaGGGCTCCCCAGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NFNGQMRAYGTKWKTSSRTTRWG*GSPVPQ
Trigger: CTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGT...CCTTGAGCTTGTCTTCCACTTGGTGCCGTAGGCCCTCATTTGTCCATTGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp CAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTCTTGTGTTGTGTACATGGCTTTaGGTTTTTCGGTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: QREQQPDGAEAPQCLSLVLCTWL*VFRSHS
Trigger: GGAGTGGGACCGAAAAACGCAAAGCCATGTACACAA...CACAAGACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp CCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATTCTTTCGGAAGCTGCTaGCCTCACAGAGCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: PGDLRGQDLARRSLTCWDSFGSC*PHRAGS
Trigger: TGAACCGGCTCTGTGAGGGCAGCAGCTTCCGAAAGA...ATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGGACCTTGTGGTTCAGTaGCAACCGGCAGTACCAGAA +
Preference number: 4 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWDLVVQ*QPAVPE
Trigger: TTCTGGTACTGCCGGTTGGCACTGAACCACAAGGTC...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAATCCTGGGCCAGCTGTTaGTCACGTGGGGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLESWASC*SRGDPA
Trigger: AGCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGA...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAATGAGACTGAGCGCTTaGAGGGAGAAATTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: WASCCSRGDPADQRAGSGMRLSA*REKFPS
Trigger: AGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTCAT...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGGAGGTCTTTGACTTaGTGGGATGAGACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVRRSLT*WDETER
Trigger: GCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCT...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTGGCACAGCTGGGTTTTCCCTaGAGCGTTCCTGGAGACTTA +
Preference number: 4 (lower is better)
Translates to: GTKRKLWVVRGGFEKWLAQLGFP*SVPGDL
Trigger: TAAGTCTCCAGGAACGCTGCAGGGAAAACCCAGCTG...TGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTCTTGTGCTTGTGACTCAGTTCTaGAGACCAAGCTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QREQQPDGAEAPQCLSLVLVTQF*RPSCFS
Trigger: GGAAAAGCAGCTTGGTCTGCAGAACTGAGTCACAAG...CACAAGACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CCA 90 bp GGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATCCTGGTTGGAGACCTaGAGGTGTGAGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GTKRKLWVVRGGFEKWLASWLET*RCEMSC
Trigger: ACAGCTCATCTCACACCTCCAGGTCTCCAACCAGGA...TGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CCA 90 bp GGAGAGAGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACCTCATCCTCTCAGACTaGCGCAGTCGTAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: GERLCVWFTSAAAPGKPHLILSD*RSRRIS
Trigger: TGAGATTCTACGACTGCGCCAGTCTGAGAGGATGAG...GTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCCTCAGCTCCACAATTaGCGGGGACTGGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLPQLHN*RGLEVI
Trigger: GATGACTTCCAGTCCCCGCCAATTGTGGAGCTGAGG...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGTGTCACCTCCCCTTGTaGGTTGTCATCCAAGTCACC +
Preference number: 4 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWCHLPL*VVIQVT
Trigger: GGTGACTTGGATGACAACCCACAAGGGGAGGTGACA...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCAAAATCCCTTCTCCTaGGTACCGTCGTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWQNPFS*VPSFLA
Trigger: AGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTG...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTGGCAACCAAGAGGAAACTCTaGGTGGTCCGAGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GTKRKLWVVRGGFEKWLATKRKL*VVRGGF
Trigger: AAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGT...TGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGTTCATGGTGATGGAGTaGGCAGAGCACCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLFMVME*AEHPAF
Trigger: GAAGGCAGGGTGCTCTGCCCACTCCATCACCATGAA...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGTTCATGGTGATGGAGTaGGCAGAGCACCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWFMVME*AEHPAF
Trigger: GAAGGCAGGGTGCTCTGCCCACTCCATCACCATGAA...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGCTCTGATATCTGTATaGGCCAGAGAGATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQALISV*AREIWW
Trigger: CCACCAGATCTCTCTGGCCCATACAGATATCAGAGC...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGAGAGAGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACCAACTTCCTGGGGTCTaGAAGGCCAAAGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: GERLCVWFTSAAAPGKPHQLPGV*KAKGKQ
Trigger: TTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTG...GTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTAGGAAGGCCAACTTCCTaGGGTCTGGAAGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLGRPTS*GLEGQR
Trigger: CCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCC...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGAGAGGCTGTGTGTGTaGTTTACAAGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GKANFLGSGRPKESKLEGERLCV*FTSAAA
Trigger: TGCTGCAGCACTTGTAAACCACACACACAGCCTCTC...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGGAGAGGCTGTGTGTGTaGTTTACAAGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWERLCV*FTSAAA
Trigger: TGCTGCAGCACTTGTAAACCACACACACAGCCTCTC...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGTGGCATCGTTCCCAATaGGCTCTAATTCAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVWHRSQ*ALIQGA
Trigger: TGCGCCCTGAATTAGAGCCCATTGGGAACGATGCCA...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396391.5
CDS-3UTR TCA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGAAGGGCAAAGCTCGAGTaGTTTGCTCTCGGACGACTT +
Preference number: 4 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGRAKLE*FALGRL
Trigger: AAGTCGTCCGAGAGCAAATCACTCGAGCTTTGCCCT...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CAAGGGCATCTGCTGTTTGTTCCTCGTGGCCCAATCCCAGGCTTCATGGTGATGGACTGGAAGTCATCCTaGCTCATCCTCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: QGHLLFVPRGPIPGFMVMDWKSS*LILSDW
Trigger: CCAGTCTGAGAGGATGAGTCAGGATGACTTCCAGTC...CATCACCATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGCAGATGCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGAGGTCCGAGGTGGGTTTaGGAAATGGCTGGCATTTAC +
Preference number: 4 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGGPRWV*EMAGIY
Trigger: GTAAATGCCAGCCATTTCTCAAACCCACCTCGGACC...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGAGCACCCTGCCTTCATaGCTCTTAGTAGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWSTLPS*LLVDRD
Trigger: GTCCCTGTCTACTAAGAGTCATGAAGGCAGGGTGCT...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp AGGTCACAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTCCGGAGATGCTTCTGTaGAAATGCATTTGCCATATC +
Preference number: 4 (lower is better)
Translates to: RSQREQQPDGAEAPQCLSPEMLL*KCICHI
Trigger: GATATGGCAAATGCATTTGCACAGAAGCATCTCCGG...ACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp TCACAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTCTTGCTAGGATCAGACTCTaGGTCAAATGCAATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQREQQPDGAEAPQCLSLARIRL*VKCNPP
Trigger: AGGAGGATTGCATTTGACGCAGAGTCTGATCCTAGC...AAGACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGATCGGGTGGTAGTCATTaGGTCCTTCATTTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: WASCCSRGDPADQRAGSGSGGSH*VLHLVV
Trigger: AACTACCAAATGAAGGACGCAATGACTACCACCCGA...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GGAGAGAGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGCTCTCGGACGACTTaGATAACCTTGTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GERLCVWFTSAAAPGKPHCSRTT*ITLLKS
Trigger: GGACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCA...GTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGAGACCTTGTGGTTCAGTaGCAACCGGCAGTACCAGAA +
Preference number: 4 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGDLVVQ*QPAVPE
Trigger: TTCTGGTACTGCCGGTTGGCACTGAACCACAAGGTC...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CAAGGGCATCTGCTGTTTGTTCCTCGTGGCCCAATCCCAGGCTTCATGGTGATGGACCTTGTGGTTCAGTaGCAACCGGCAGTACCAGAA +
Preference number: 4 (lower is better)
Translates to: QGHLLFVPRGPIPGFMVMDLVVQ*QPAVPE
Trigger: TTCTGGTACTGCCGGTTGGCACTGAACCACAAGGTC...CATCACCATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGCAGATGCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGAAGGCAAGGGCATCTaGTGTTTGTTCCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTEGKGI*CLFLVA
Trigger: GGCCACGAGGAACAAACAGCAGATGCCCTTGCCTTC...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAGAAATTTCCGTCTaGTCTGATATCTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: WASCCSRGDPADQRAGSGGEISV*SDICMG
Trigger: GCCCATACAGATATCAGAGCAGACGGAAATTTCTCC...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CAAGGGCATCTGCTGTTTGTTCCTCGTGGCCCAATCCCAGGCTTCATGGTGATGCAGCTGGGTTTTCCCTaGAGCGTTCCTGGAGACTTA +
Preference number: 4 (lower is better)
Translates to: QGHLLFVPRGPIPGFMVMQLGFP*SVPGDL
Trigger: TAAGTCTCCAGGAACGCTGCAGGGAAAACCCAGCTG...CATCACCATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGCAGATGCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGTCCTGGTTGGAGACCTaGAGGTGTGAGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ANGRNHSTRKGRPTSWGLSWLET*RCEMSC
Trigger: ACAGCTCATCTCACACCTCCAGGTCTCCAACCAGGA...CAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CCA 90 bp CCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATTCCTGGTTGGAGACCTaGAGGTGTGAGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PGDLRGQDLARRSLTCWDSWLET*RCEMSC
Trigger: ACAGCTCATCTCACACCTCCAGGTCTCCAACCAGGA...ATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CCA 90 bp GGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGCCATACTGATCCAAAGAGTTaGGTTTGGAGGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GPKSLLLGTVVSGSRLSHTDPKS*VWRAKL
Trigger: GAGCTTTGCCCTCCAAACCCAACTCTTTGGATCAGT...ATGGCTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGTGTCACCTCCCCTTGTaGGTTGTCATCCAAGTCACC +
Preference number: 4 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLCHLPL*VVIQVT
Trigger: GGTGACTTGGATGACAACCCACAAGGGGAGGTGACA...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGGGTGGGTTTGAGAAATaGCTGGCATTTACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWGGFEK*LAFTGH
Trigger: GTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGGGTGGGTTTGAGAAATaGCTGGCATTTACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVGGFEK*LAFTGH
Trigger: GTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGAGAGGAAACTCTGGGTaGTCCGAGGTGGGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLRGNSG*SEVGLR
Trigger: TCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCT...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGAGCTGTTTGTTCCTCGTaGCCCAATCCCAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGAVCSS*PNPRLH
Trigger: ATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGC...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGGCTCTGATATCTGTATaGGCCAGAGAGATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVALISV*AREIWW
Trigger: CCACCAGATCTCTCTGGCCCATACAGATATCAGAGC...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTAGACTGGAAGTCATCCTaGCTCATCCTCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLDWKSS*LILSDW
Trigger: CCAGTCTGAGAGGATGAGTCAGGATGACTTCCAGTC...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGTCCCCAGAAGGGCACTaGGGCCATCAATCCAGATGC +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWSPEGH*GHQSRC
Trigger: GCATCTGGATTGATGGCCTCAGTGCCCTTCTGGGGA...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATCCCCAGAAGGGCACTaGGGCCATCAATCCAGATGC +
Preference number: 4 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPSPEGH*GHQSRC
Trigger: GCATCTGGATTGATGGCCTCAGTGCCCTTCTGGGGA...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTCCTCAGCCAGCTCCCTaGAATCATGGCCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: WSEVGLRNGWHLLATKITPQPAP*NHGQWQ
Trigger: CTGCCATTGGCCATGATTTCAGGGAGCTGGCTGAGG...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp ACTGGCCACCAAAATCACTACAGATTCTGTACAAGCAAAAGACAAGGCACCAGACTCCATCAGCTGGCGTaGAGCCCGGGACGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: TGHQNHYRFCTSKRQGTRLHQLA*SPGRGD
Trigger: ATCTCCCCGTCCCGGGCTGCACGCCAGCTGATGGAG...TCTGGTGCCTTGTCTTTTGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp GGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTGGCAGGTAGTTCCCCAACCTaGAGGATTTCACAGAGCATT +
Preference number: 4 (lower is better)
Translates to: GTKRKLWVVRGGFEKWLAGSSPT*RISQSI
Trigger: AATGCTCTGTGAAATCCTGCAGGTTGGGGAACTACC...TGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGTGCTCTCGGACGACTTaGATAACCTTGTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVCSRTT*ITLLKS
Trigger: GGACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCA...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGTGCTCTCGGACGACTTaGATAACCTTGTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWCSRTT*ITLLKS
Trigger: GGACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCA...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGAAAGCTCGAGTGATTTaGTCTCGGACGACTTGCATA +
Preference number: 4 (lower is better)
Translates to: GKANFLGSGRPKESKLEGKARVI*SRTTCI
Trigger: TATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTT...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGAAAGCTCGAGTGATTTaGTCTCGGACGACTTGCATA +
Preference number: 4 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQKARVI*SRTTCI
Trigger: TATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTT...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCTCTTTCGGAAGCTGCTaGCCTCACAGAGCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: ETERLQGEISVCSDICMGSFGSC*PHRAGS
Trigger: TGAACCGGCTCTGTGAGGGCAGCAGCTTCCGAAAGA...GCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGACCTTGTGGTTCAGTaGCAACCGGCAGTACCAGAA +
Preference number: 4 (lower is better)
Translates to: MAETIALGREGQLPGVWKDLVVQ*QPAVPE
Trigger: TTCTGGTACTGCCGGTTGGCACTGAACCACAAGGTC...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCAATGGCCTTAATGTCTaGAACAGGAATTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TGVASAGLSQLPEIMANGNGLNV*NRNFLL
Trigger: CAGGAGAAAATTCCTGTTGCAGACATTAAGGCCATT...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCGAAGGCAAGGGCATCTaGTGTTTGTTCCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: ETERLQGEISVCSDICMGEGKGI*CLFLVA
Trigger: GGCCACGAGGAACAAACAGCAGATGCCCTTGCCTTC...GCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCAAACACACCTGTCCTCTaGAGGCAGCCTTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPNTPVL*RQPFLG
Trigger: GCCCAGGAAAGGCTGCCTGCAGAGGACAGGTGTGTT...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACGGAGAAATTTCCGTCTaGTCTGATATCTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHGEISV*SDICMG
Trigger: GCCCATACAGATATCAGAGCAGACGGAAATTTCTCC...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCGCCAGGGGCCGTTTCTaGTCGATTTCAAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ACREKFPSALISVWAREIARGRF*SISRSW
Trigger: CCAGCTCCTTGAAATCGACCAGAAACGGCCCCTGGC...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CCA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGACGTCGGCAGAGAGCTTaGCCAGCTCCTTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGRRQRA*PAPSWH
Trigger: ATGCCATGAAGGAGCTGGCCAAGCTCTCTGCCGACG...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGTCTGAATCTCCTGGTTaGAGACCTGGAGGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLSESPG*RPGGVR
Trigger: TCTCACACCTCCAGGTCTCCAACCAGGAGATTCAGA...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CCA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGTCCTTTGTGTACATaGCTTTGCGTTTTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHSPLCT*LCVFRS
Trigger: GGACCGAAAAACGCAAAGCCATGTACACAAAGGACT...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTCTTGTGGGTAAAGTCCATGGCTaGATTGATGTGGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: QREQQPDGAEAPQCLSLVGKVHG*IDVVGK
Trigger: TTTACCAACCACATCAATCCAGCCATGGACTTTACC...CACAAGACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGTCTTGTTCAACAGCTaGATGCAGATTCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GKANFLGSGRPKESKLEGVLFNS*MQIPKS
Trigger: GCTCTTTGGAATCTGCATCCAGCTGTTGAACAAGAC...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CAAGGGCATCTGCTGTTTGTTCCTCGTGGCCCAATCCCAGGCTTCATGGTGATGCTCATCCTCTCAGACTaGCGCAGTCGTAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: QGHLLFVPRGPIPGFMVMLILSD*RSRRIS
Trigger: TGAGATTCTACGACTGCGCCAGTCTGAGAGGATGAG...CATCACCATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGCAGATGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGACTCATCCTCTCAGACTaGCGCAGTCGTAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGLILSD*RSRRIS
Trigger: TGAGATTCTACGACTGCGCCAGTCTGAGAGGATGAG...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCTCAAGGATCTCGGGCTaGATCTTCTCCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SVCSDICMGQRDLVALKTSRISG*IFSLSS
Trigger: GGAGCTGAGGGAGAAGATCCAGCCCGAGATCCTTGA...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGAGAGGAAACTCTGGGTaGTCCGAGGTGGGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: MAETIALGREGQLPGVWKRGNSG*SEVGLR
Trigger: TCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCT...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTAACCAAGAGGAAACTCTaGGTGGTCCGAGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLTKRKL*VVRGGF
Trigger: AAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGT...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCTTCATGGTGATGGAGTaGGCAGAGCACCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: ETERLQGEISVCSDICMGFMVME*AEHPAF
Trigger: GAAGGCAGGGTGCTCTGCCCACTCCATCACCATGAA...GCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGCTCTGATATCTGTATaGGCCAGAGAGATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ANGRNHSTRKGRPTSWGLALISV*AREIWW
Trigger: CCACCAGATCTCTCTGGCCCATACAGATATCAGAGC...CAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGAGGTCTTTGACTTGCTaGGATGAGACTGAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWRSLTC*DETERL
Trigger: CAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCT...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CAAGGGCATCTGCTGTTTGTTCCTCGTGGCCCAATCCCAGGCTTCATGGTGATGAGGTCTTTGACTTGCTaGGATGAGACTGAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: QGHLLFVPRGPIPGFMVMRSLTC*DETERL
Trigger: CAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCT...CATCACCATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGCAGATGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGCAAAGGAAAGCAAACTaGAGGGGGCTGCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWQRKAN*RGLQFR
Trigger: CCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTG...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGCAACTTCCTGGGGTCTaGAAGGCCAAAGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: ANGRNHSTRKGRPTSWGLQLPGV*KAKGKQ
Trigger: TTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTG...CAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CAAGGGCATCTGCTGTTTGTTCCTCGTGGCCCAATCCCAGGCTTCATGGTGATGCAACTTCCTGGGGTCTaGAAGGCCAAAGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: QGHLLFVPRGPIPGFMVMQLPGV*KAKGKQ
Trigger: TTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTG...CATCACCATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGCAGATGCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCAGGAAGGCCAACTTCCTaGGGTCTGGAAGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPGRPTS*GLEGQR
Trigger: CCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCC...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CAA 72 bp GGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTaGAGAAATGGCTGGCATTTACTGGCCACCAAAATC +
Preference number: 4 (lower is better)
Translates to: GPRGNSGWSEVG*RNGWHLLATKI
Trigger: GATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CAA 72 bp AGCGATGGAACAGCCTGGGGTCTGCACATCAAGATCTaGGCCAAAGTCCTAGTGACTCGGCATCATCACCAA +
Preference number: 4 (lower is better)
Translates to: SDGTAWGLHIKI*AKVLVTRHHHQ
Trigger: TTGGTGATGATGCCGAGTCACTAGGACTTTGGCCAAGATCTTGATGTGCAGACCCCAGGCTGTTCCATCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR TCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCACAGAGCATTTTGGTaGGCTCAATGGCACTGCGGC +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWHRAFW*AQWHCG
Trigger: GCCGCAGTGCCATTGAGCTCACCAAAATGCTCTGTG...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR TCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAAGGGCAAAGCTCGAGTaGTTTGCTCTCGGACGACTT +
Preference number: 4 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLERAKLE*FALGRL
Trigger: AAGTCGTCCGAGAGCAAATCACTCGAGCTTTGCCCT...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp AGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTGTTCCTCGTGGGACTGGAAGTCATCCTaGCTCATCCTCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: RSSFLDWKARASAVCSSWDWKSS*LILSDW
Trigger: CCAGTCTGAGAGGATGAGTCAGGATGACTTCCAGTC...CCACGAGGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCCCAGGCTTCATGGTaGTGGAGTGGGCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: EVGLRNGWHLLATKITTDSQASW*WSGQST
Trigger: GGTGCTCTGCCCACTCCATCACCATGAAGCCTGGGA...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCACGTCTTGGCACCATATaGAGCTGGAGTGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPRLGTI*SWSEPS
Trigger: TGAGGGCTCACTCCAGCTTCATATGGTGCCAAGACG...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GCCACAAGTGTGGCTGGAGATGAGGCCCAGCATAAATCAACCTTAACTTACCCACGTCTTGGCACCATATaGAGCTGGAGTGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ATSVAGDEAQHKSTLTYPRLGTI*SWSEPS
Trigger: TGAGGGCTCACTCCAGCTTCATATGGTGCCAAGACG...TGGGTAAGTTAAGGTTGATTTATGCTGGGCCTCATCTCCAGCCACACTTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR TCA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGAATTTCCGTCTGCTCTaGTATCTGTATGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWNFRLL*YLYGPE
Trigger: CTCTGGCCCATACAGATATCAGAGCAGACGGAAATT...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGTTCAGCTCATAAATaGAAAGCAATGACTGCATCA +
Preference number: 4 (lower is better)
Translates to: WASCCSRGDPADQRAGSGGSAHK*KAMTAS
Trigger: TGATGCAGTCATTGCTTTTCATTTATGAGCTGAACC...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR GCA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGCAGCTGAGGACCATCTaGATAACGGAGGGTATAATA +
Preference number: 4 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVQLRTI*ITEGII
Trigger: TATTATACCCTCCGTTATGCAGATGGTCCTCAGCTG...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGCTGTGCAAATGCATTTaGCATATCCTGTCGTTTGTC +
Preference number: 4 (lower is better)
Translates to: GKANFLGSGRPKESKLEGLCKCI*HILSFV
Trigger: GACAAACGACAGGATATGGCAAATGCATTTGCACAG...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp TCACAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTCTTAGACTCTGCGTCAAATaGAATCCTCCTCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: SQREQQPDGAEAPQCLSLRLCVK*NPPQFK
Trigger: TTTGAACTGAGGAGGATTGCATTTGACGCAGAGTCT...AAGACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp GGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGCCATAGACTCTGCGTCAAATaGAATCCTCCTCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: GPKSLLLGTVVSGSRLSHRLCVK*NPPQFK
Trigger: TTTGAACTGAGGAGGATTGCATTTGACGCAGAGTCT...ATGGCTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR GCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGGCTAGGATCAGACTCTaGGTCAAATGCAATCCTCCT +
Preference number: 4 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLARIRL*VKCNPP
Trigger: AGGAGGATTGCATTTGACGCAGAGTCTGATCCTAGC...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGTTGTGTACATGGCTTTaGGTTTTTCGGTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLLCTWL*VFRSHS
Trigger: GGAGTGGGACCGAAAAACGCAAAGCCATGTACACAA...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTCTTTCGGAAGCTGCTaGCCTCACAGAGCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: ACREKFPSALISVWAREISFGSC*PHRAGS
Trigger: TGAACCGGCTCTGTGAGGGCAGCAGCTTCCGAAAGA...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGTCTTTCGGAAGCTGCTaGCCTCACAGAGCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWSFGSC*PHRAGS
Trigger: TGAACCGGCTCTGTGAGGGCAGCAGCTTCCGAAAGA...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGACAATCTTTCGGAAGCTaGTGCCCTCACAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: VCSDICMGQRDLVALKTRQSFGS*CPHRAG
Trigger: ACCGGCTCTGTGAGGGCAGCAGCTTCCGAAAGATTG...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCACAATCTTTCGGAAGCTaGTGCCCTCACAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPQSFGS*CPHRAG
Trigger: ACCGGCTCTGTGAGGGCAGCAGCTTCCGAAAGATTG...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGACAGGAATTTTCTCCTaGAGGGATTCAAATGTCACC +
Preference number: 4 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQTGIFS*RDSNVT
Trigger: GGTGACATTTGAATCCCTGCAGGAGAAAATTCCTGT...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGAGAAGGCAAGGGCATCTaGTGTTTGTTCCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: VCSDICMGQRDLVALKTREGKGI*CLFLVA
Trigger: GGCCACGAGGAACAAACAGCAGATGCCCTTGCCTTC...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTAACACACCTGTCCTCTaGAGGCAGCCTTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LKSWPMAETIALGREGQLNTPVL*RQPFLG
Trigger: GCCCAGGAAAGGCTGCCTGCAGAGGACAGGTGTGTT...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGGGAGAAATTTCCGTCTaGTCTGATATCTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWGEISV*SDICMG
Trigger: GCCCATACAGATATCAGAGCAGACGGAAATTTCTCC...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp AAAGCACCGAGGGATAACTATCGATTAAGTACCCAGGGTGTGCACATCATGCCACAGGGATTCTCCAGGTaGCAGCCAGCTGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: KAPRDNYRLSTQGVHIMPQGFSR*QPAVKG
Trigger: GCCTTTGACAGCTGGCTGGCACCTGGAGAATCCCTG...TGGCATGATGTGCACACCCTGGGTACTTAATCGATAGTTATCCCTCGGTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp AACTATCGATTAAGTACCCAGGGTGTGCACATCATGCCAGTCCACTCTTCTCTCGCTGAGGCTCCCCAGTaGCTCAGTCTTGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: NYRLSTQGVHIMPVHSSLAEAPQ*LSLVTQ
Trigger: CTGAGTCACAAGACTGAGGCACTGGGGAGCCTCAGC...GAGAGAAGAGTGGACTGGCATGATGTGCACACCCTGGGTACTTAATCGATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp CCGAGGGATAACTATCGATTAAGTACCCAGGGTGTGCACATCATGCCAGTCCACAGGGTGTGCACATCATaGCAGTCCACTCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PRDNYRLSTQGVHIMPVHRVCTS*QSTLLS
Trigger: GGAGAGAAGAGTGGACTGGCATGATGTGCACACCCT...GTGGACTGGCATGATGTGCACACCCTGGGTACTTAATCGATAGTTATCCCTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCTTAATGTTTTTCTCCTaGAGGGATTCAAATGTCACC +
Preference number: 4 (lower is better)
Translates to: TGVASAGLSQLPEIMANGLMFFS*RDSNVT
Trigger: GGTGACATTTGAATCCCTGCAGGAGAAAAACATTAA...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452857.5
CDS-3UTR CCA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGTTTGAGCCTGGTCATTaGGGTCCATCTTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWFEPGH*GPSWSS
Trigger: TGATGACCAAGATGGACCCCAATGACCAGGCTCAAA...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGACTGATCCAAAGAGTTaGGTTTGGAGGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWTDPKS*VWRAKL
Trigger: GAGCTTTGCCCTCCAAACCCAACTCTTTGGATCAGT...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTCCTCAGCTCCACAATTaGCGGGGACTGGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: WSEVGLRNGWHLLATKITPQLHN*RGLEVI
Trigger: GATGACTTCCAGTCCCCGCCAATTGTGGAGCTGAGG...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGATCAAGGATCTCGGGCTaGATCTTCTCCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VCSDICMGQRDLVALKTRSRISG*IFSLSS
Trigger: GGAGCTGAGGGAGAAGATCCAGCCCGAGATCCTTGA...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTCAAGGATCTCGGGCTaGATCTTCTCCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ACREKFPSALISVWAREISRISG*IFSLSS
Trigger: GGAGCTGAGGGAGAAGATCCAGCCCGAGATCCTTGA...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGTCAAGGATCTCGGGCTaGATCTTCTCCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWSRISG*IFSLSS
Trigger: GGAGCTGAGGGAGAAGATCCAGCCCGAGATCCTTGA...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTCAAAATCCCTTCTCCTaGGTACCGTCGTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTQNPFS*VPSFLA
Trigger: AGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTG...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTGGCAATGGCTGGCATTTACTaGCCACCAAAATCACTACAG +
Preference number: 4 (lower is better)
Translates to: GTKRKLWVVRGGFEKWLAMAGIY*PPKSLQ
Trigger: CTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCAT...TGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGGGTTTGAGAAATGGCTaGCATTTACTGGCCACCAAA +
Preference number: 4 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWGLRNG*HLLATK
Trigger: TTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAAGAGGAAACTCTGGGTaGTCCGAGGTGGGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLERGNSG*SEVGLR
Trigger: TCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCT...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTAAGCAGTTTCTTGGACTaGAAGGCAAGGGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLSSFLD*KARASA
Trigger: AGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCT...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTAGCTCTGATATCTGTATaGGCCAGAGAGATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLALISV*AREIWW
Trigger: CCACCAGATCTCTCTGGCCCATACAGATATCAGAGC...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGTCCCTGCAGCGTTCCTaGAGACTTAAGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLSLQRS*RLKRAG
Trigger: TCCTGCCCTCTTAAGTCTCCAGGAACGCTGCAGGGA...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ACTGGCCACCAAAATCACTACAGATTCTGTACAAGCAAAAGACAAGGCACCAGAAGGCGGCCACAAGTGTaGCTGGAGATGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TGHQNHYRFCTSKRQGTRRRPQV*LEMRPS
Trigger: GCTGGGCCTCATCTCCAGCCACACTTGTGGCCGCCT...TCTGGTGCCTTGTCTTTTGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR TCA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGAAGGGCAAAGCTCGAGTaGTTTGCTCTCGGACGACTT +
Preference number: 4 (lower is better)
Translates to: VCSDICMGQRDLVALKTRRAKLE*FALGRL
Trigger: AAGTCGTCCGAGAGCAAATCACTCGAGCTTTGCCCT...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGAAGGGCAAAGCTCGAGTaGTTTGCTCTCGGACGACTT +
Preference number: 4 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGRAKLE*FALGRL
Trigger: AAGTCGTCCGAGAGCAAATCACTCGAGCTTTGCCCT...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGGACTGGAAGTCATCCTaGCTCATCCTCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWDWKSS*LILSDW
Trigger: CCAGTCTGAGAGGATGAGTCAGGATGACTTCCAGTC...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTCAGGCGCTGCTGCTTaGTCAGCTCAAGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFSGAAA*SAQGSR
Trigger: CCGAGATCCTTGAGCTGATCAAGCAGCAGCGCCTGA...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTAGCACCCTGCCTTCATaGCTCTTAGTAGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: WSEVGLRNGWHLLATKITSTLPS*LLVDRD
Trigger: GTCCCTGTCTACTAAGAGTCATGAAGGCAGGGTGCT...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTACTCAGGAGGAAAAGGTaGGTGGCTGTTGTTAAATCC +
Preference number: 4 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLLRRKR*VAVVKS
Trigger: GGATTTAACAACAGCCACTCACCTTTTCCTCCTGAG...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTAATTTCCGTCTGCTCTaGTATCTGTATGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTNFRLL*YLYGPE
Trigger: CTCTGGCCCATACAGATATCAGAGCAGACGGAAATT...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATCCTCAGCCAGCTCCCTaGAATCATGGCCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: EVGLRNGWHLLATKITTDPQPAP*NHGQWQ
Trigger: CTGCCATTGGCCATGATTTCAGGGAGCTGGCTGAGG...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCACCTCAGCCAGCTCCCTaGAATCATGGCCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEAPQPAP*NHGQWQ
Trigger: CTGCCATTGGCCATGATTTCAGGGAGCTGGCTGAGG...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGAATTCCAACACCTCCTaGAGGAGAAAGGGTTTAAAT +
Preference number: 4 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWNSNTS*RRKGLN
Trigger: ATTTAAACCCTTTCTCCTTCAGGAGGTGTTGGAATT...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR GCA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCAGCTGAGGACCATCTaGATAACGGAGGGTATAATA +
Preference number: 4 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLQLRTI*ITEGII
Trigger: TATTATACCCTCCGTTATGCAGATGGTCCTCAGCTG...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTGGCTGTTCAAGACCATaGTCTCCAGGATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSGCSRP*SPGWPG
Trigger: CCCTGGCCATCCTGGAGAGCATGGTCTTGAACAGCC...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGCTAGGATCAGACTCTaGGTCAAATGCAATCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTARIRL*VKCNPP
Trigger: AGGAGGATTGCATTTGACGCAGAGTCTGATCCTAGC...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATAAAGCTCGAGTGATTTaGTCTCGGACGACTTGCATA +
Preference number: 4 (lower is better)
Translates to: PGDLRGQDLARRSLTCWDKARVI*SRTTCI
Trigger: TATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTT...ATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGACCTTGTGGTTCAGTaGCAACCGGCAGTACCAGAA +
Preference number: 4 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLDLVVQ*QPAVPE
Trigger: TTCTGGTACTGCCGGTTGGCACTGAACCACAAGGTC...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGACAGGAATTTTCTCCTaGAGGGATTCAAATGTCACC +
Preference number: 4 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWTGIFS*RDSNVT
Trigger: GGTGACATTTGAATCCCTGCAGGAGAAAATTCCTGT...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGAGTCTTGTTCAACAGCTaGATGCAGATTCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGVLFNS*MQIPKS
Trigger: GCTCTTTGGAATCTGCATCCAGCTGTTGAACAAGAC...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTCAGCTCCACAATTaGCGGGGACTGGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: LKSWPMAETIALGREGQLPQLHN*RGLEVI
Trigger: GATGACTTCCAGTCCCCGCCAATTGTGGAGCTGAGG...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGTGTCACCTCCCCTTGTaGGTTGTCATCCAAGTCACC +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWCHLPL*VVIQVT
Trigger: GGTGACTTGGATGACAACCCACAAGGGGAGGTGACA...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTACAGGGTCATACAGGATaGAGAAGGCCAATTCCAACA +
Preference number: 4 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLQGHTG*RRPIPT
Trigger: TGTTGGAATTGGCCTTCTCCATCCTGTATGACCCTG...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAAAATCCCTTCTCCTaGGTACCGTCGTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ETERLQGEISVCSDICMGQNPFS*VPSFLA
Trigger: AGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTG...GCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGAGCTGTTTGTTCCTCGTaGCCCAATCCCAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: VCSDICMGQRDLVALKTRAVCSS*PNPRLH
Trigger: ATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGC...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTGTTCCTCGTGGGAAGCAGCAACGTCTTaGCACCATATGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RSSFLDWKARASAVCSSWEAATS*HHMKLE
Trigger: CTCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTC...CCACGAGGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTGTAGGCCCAGGCCTCAGCTaGGTTTTCCCTGCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: GLRNGWHLLATKITTDSVGPGLS*VFPAAF
Trigger: GAACGCTGCAGGGAAAACCCAGCTGAGGCCTGGGCC...TACAGAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTGTTCCTCGTGGCAACTTCCTGGGGTCTaGAAGGCCAAAGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: RSSFLDWKARASAVCSSWQLPGV*KAKGKQ
Trigger: TTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTG...CCACGAGGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGAGAGGCTGTGTGTGTaGTTTACAAGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLEERLCV*FTSAAA
Trigger: TGCTGCAGCACTTGTAAACCACACACACAGCCTCTC...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGAGCGATGGAACAGCCTaGGGTCTGCACATCAAGATC +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWSDGTA*GLHIKI
Trigger: GATCTTGATGTGCAGACCCCAGGCTGTTCCATCGCT...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR TCA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAATTTCCGTCTGCTCTaGTATCTGTATGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SVCSDICMGQRDLVALKTNFRLL*YLYGPE
Trigger: CTCTGGCCCATACAGATATCAGAGCAGACGGAAATT...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GCCAGTCCACTCTTCTCTCCTAACCTTCCCAGTTCACAAAACTACAGCAGTACCACTTCAATGGACAAATaGGGGCCTACGGCACCAAGT +
Preference number: 4 (lower is better)
Translates to: ASPLFSPNLPSSQNYSSTTSMDK*GPTAPS
Trigger: ACTTGGTGCCGTAGGCCCTCATTTGTCCATTGAAGT...GGTACTGCTGTAGTTTTGTGAACTGGGAAGGTTAGGAGAGAAGAGTGGACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGCCGGAGATGCTTCTGTaGAAATGCATTTGCCATATC +
Preference number: 4 (lower is better)
Translates to: MAETIALGREGQLPGVWKPEMLL*KCICHI
Trigger: GATATGGCAAATGCATTTGCACAGAAGCATCTCCGG...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGATTATAGACCGGAGATaGTTCTGTGCAAATGCATTT +
Preference number: 4 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWIIDRR*FCANAF
Trigger: AAATGCATTTGCACAGAAGCATCTCCGGTCTATAAT...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGATTATAGACCGGAGATaGTTCTGTGCAAATGCATTT +
Preference number: 4 (lower is better)
Translates to: GKANFLGSGRPKESKLEGIIDRR*FCANAF
Trigger: AAATGCATTTGCACAGAAGCATCTCCGGTCTATAAT...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCTTGTGTACATGGCTTTaGGTTTTTCGGTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: SVCSDICMGQRDLVALKTLCTWL*VFRSHS
Trigger: GGAGTGGGACCGAAAAACGCAAAGCCATGTACACAA...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGTAGTTCCCCAACCTaGAGGATTTCACAGAGCATT +
Preference number: 4 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLEGSSPT*RISQSI
Trigger: AATGCTCTGTGAAATCCTGCAGGTTGGGGAACTACC...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGTCGGGTGGTAGTCATTaGGTCCTTCATTTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: MAETIALGREGQLPGVWKSGGSH*VLHLVV
Trigger: AACTACCAAATGAAGGACGCAATGACTACCACCCGA...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CCAGTGCCTCAGTCTTGTGACTCAGTTCTGCAGACCAAGCTGCTTTTCCAGCTCTCGGGTGGTAGTCATTaGGTCCTTCATTTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: PVPQSCDSVLQTKLLFQLSGGSH*VLHLVV
Trigger: AACTACCAAATGAAGGACGCAATGACTACCACCCGA...GAGCTGGAAAAGCAGCTTGGTCTGCAGAACTGAGTCACAAGACTGAGGCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAATGCTCTCGGACGACTTaGATAACCTTGTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLECSRTT*ITLLKS
Trigger: GGACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCA...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTAAAGCTCGAGTGATTTaGTCTCGGACGACTTGCATA +
Preference number: 4 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTKARVI*SRTTCI
Trigger: TATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTT...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCACAATCTTTCGGAAGCTaGTGCCCTCACAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEAQSFGS*CPHRAG
Trigger: ACCGGCTCTGTGAGGGCAGCAGCTTCCGAAAGATTG...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCATGAGACTGAGCGCTTaGAGGGAGAAATTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: SVCSDICMGQRDLVALKTMRLSA*REKFPS
Trigger: AGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTCAT...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGTCTTGTTCAACAGCTaGATGCAGATTCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: MAETIALGREGQLPGVWKVLFNS*MQIPKS
Trigger: GCTCTTTGGAATCTGCATCCAGCTGTTGAACAAGAC...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCACTCATCCTCTCAGACTaGCGCAGTCGTAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPLILSD*RSRRIS
Trigger: TGAGATTCTACGACTGCGCCAGTCTGAGAGGATGAG...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCCCTCAGCTCCACAATTaGCGGGGACTGGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFPQLHN*RGLEVI
Trigger: GATGACTTCCAGTCCCCGCCAATTGTGGAGCTGAGG...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCATCAAGGATCTCGGGCTaGATCTTCTCCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEASRISG*IFSLSS
Trigger: GGAGCTGAGGGAGAAGATCCAGCCCGAGATCCTTGA...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCACAAAATCCCTTCTCCTaGGTACCGTCGTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPQNPFS*VPSFLA
Trigger: AGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTG...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGATGGCTGGCATTTACTaGCCACCAAAATCACTACAG +
Preference number: 4 (lower is better)
Translates to: MAETIALGREGQLPGVWKMAGIY*PPKSLQ
Trigger: CTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCAT...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCGGTGGGTTTGAGAAATaGCTGGCATTTACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ACREKFPSALISVWAREIGGFEK*LAFTGH
Trigger: GTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTAGCAGTTTCTTGGACTaGAAGGCAAGGGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: WSEVGLRNGWHLLATKITSSFLD*KARASA
Trigger: AGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCT...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCGAAGCAGCAACGTCTTaGCACCATATGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ACREKFPSALISVWAREIEAATS*HHMKLE
Trigger: CTCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTC...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGAAGGTCTTTGACTTGCTaGGATGAGACTGAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGRSLTC*DETERL
Trigger: CAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCT...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTTCCCTGCAGCGTTCCTaGAGACTTAAGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSSLQRS*RLKRAG
Trigger: TCCTGCCCTCTTAAGTCTCCAGGAACGCTGCAGGGA...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AAAGCACCGAGGGATAACTATCGATTAAGTACCCAGGGTGTGCACATCATGCCACAGCTTTTGAGGGCCTaGCACAACAGTGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: KAPRDNYRLSTQGVHIMPQLLRA*HNSALH
Trigger: ATGCAGAGCACTGTTGTGCCAGGCCCTCAAAAGCTG...TGGCATGATGTGCACACCCTGGGTACTTAATCGATAGTTATCCCTCGGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CCA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGCCAGCTACTCAAACTaGCCTCTCTACTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLASYSN*PLYSPC
Trigger: ACAAGGTGAGTAGAGAGGCCAGTTTGAGTAGCTGGC...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGCTATCGTGCTGTATTTaGCATAGGAATGTCTTAACA +
Preference number: 4 (lower is better)
Translates to: GKANFLGSGRPKESKLEGLSCCI*HRNVLT
Trigger: TGTTAAGACATTCCTATGCCAAATACAGCACGATAG...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR TCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTAGGGCAAAGCTCGAGTaGTTTGCTCTCGGACGACTT +
Preference number: 4 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSRAKLE*FALGRL
Trigger: AAGTCGTCCGAGAGCAAATCACTCGAGCTTTGCCCT...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTGTATCAGGCGCTGCTGCTTaGTCAGCTCAAGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: GLRNGWHLLATKITTDSVSGAAA*SAQGSR
Trigger: CCGAGATCCTTGAGCTGATCAAGCAGCAGCGCCTGA...TACAGAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATGGTCCGAGGTGGGTTTaGGAAATGGCTGGCATTTAC +
Preference number: 4 (lower is better)
Translates to: EVGLRNGWHLLATKITTDGPRWV*EMAGIY
Trigger: GTAAATGCCAGCCATTTCTCAAACCCACCTCGGACC...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp AATCCATTTCAAGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTCGTCTTGGCACCATATaGAGCTGGAGTGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: NPFQEAVSWTGRQGHLLFRLGTI*SWSEPS
Trigger: TGAGGGCTCACTCCAGCTTCATATGGTGCCAAGACG...AAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGAAATGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGAAATTTCCGTCTGCTCTaGTATCTGTATGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VCSDICMGQRDLVALKTRNFRLL*YLYGPE
Trigger: CTCTGGCCCATACAGATATCAGAGCAGACGGAAATT...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp AAAGCACCGAGGGATAACTATCGATTAAGTACCCAGGGTGTGCACATCATGCCAAGTGCCTCAGTCTTGTaGCTCAGTTCTGCAGACCAA +
Preference number: 4 (lower is better)
Translates to: KAPRDNYRLSTQGVHIMPSASVL*LSSADQ
Trigger: TTGGTCTGCAGAACTGAGTCACAAGACTGAGGCACT...TGGCATGATGTGCACACCCTGGGTACTTAATCGATAGTTATCCCTCGGTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGACATACCCTGCAATCTaGTTAATAAAGGTGATTGAA +
Preference number: 4 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQTYPAI*LIKVIE
Trigger: TTCAATCACCTTTATTAAGCAGATTGCAGGGTATGT...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp CCCCTAGATGATCAGCTTTTGAGGGCCTGGCACAACAGTGCTCTGCATAGAGTGCTGTGCAAATGCATTTaGCATATCCTGTCGTTTGTC +
Preference number: 4 (lower is better)
Translates to: PLDDQLLRAWHNSALHRVLCKCI*HILSFV
Trigger: GACAAACGACAGGATATGGCAAATGCATTTGCACAG...CACTCTATGCAGAGCACTGTTGTGCCAGGCCCTCAAAAGCTGATCATCTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTAATGCTTCTGTGCAAATaGATTTGCCATATCCTGTCG +
Preference number: 4 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLMLLCK*ICHILS
Trigger: CGACAGGATATGGCAAATGCATTTGCACAGAAGCAT...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGAGCTAGGATCAGACTCTaGGTCAAATGCAATCCTCCT +
Preference number: 4 (lower is better)
Translates to: VCSDICMGQRDLVALKTRARIRL*VKCNPP
Trigger: AGGAGGATTGCATTTGACGCAGAGTCTGATCCTAGC...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGTTGTGTACATGGCTTTaGGTTTTTCGGTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLLCTWL*VFRSHS
Trigger: GGAGTGGGACCGAAAAACGCAAAGCCATGTACACAA...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCGGTAGTTCCCCAACCTaGAGGATTTCACAGAGCATT +
Preference number: 4 (lower is better)
Translates to: ACREKFPSALISVWAREIGSSPT*RISQSI
Trigger: AATGCTCTGTGAAATCCTGCAGGTTGGGGAACTACC...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGTGCTCTCGGACGACTTaGATAACCTTGTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLCSRTT*ITLLKS
Trigger: GGACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCA...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCAATGAGACTGAGCGCTTaGAGGGAGAAATTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPMRLSA*REKFPS
Trigger: AGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTCAT...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGATGAGACTGAGCGCTTaGAGGGAGAAATTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWMRLSA*REKFPS
Trigger: AGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTCAT...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGAATGAGACTGAGCGCTTaGAGGGAGAAATTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGMRLSA*REKFPS
Trigger: AGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTCAT...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATAGGAGGTCTTTGACTTaGTGGGATGAGACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: EVGLRNGWHLLATKITTDRRSLT*WDETER
Trigger: GCGCTCAGTCTCATCCCAGCAAGTCAAAGACCTCCT...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTGTAGCCAGGGGCCGTTTCTaGTCGATTTCAAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLRNGWHLLATKITTDSVARGRF*SISRSW
Trigger: CCAGCTCCTTGAAATCGACCAGAAACGGCCCCTGGC...TACAGAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CCA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGATTTGAGCCTGGTCATTaGGGTCCATCTTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGFEPGH*GPSWSS
Trigger: TGATGACCAAGATGGACCCCAATGACCAGGCTCAAA...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGAACTGATCCAAAGAGTTaGGTTTGGAGGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGTDPKS*VWRAKL
Trigger: GAGCTTTGCCCTCCAAACCCAACTCTTTGGATCAGT...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCAACTGATCCAAAGAGTTaGGTTTGGAGGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPTDPKS*VWRAKL
Trigger: GAGCTTTGCCCTCCAAACCCAACTCTTTGGATCAGT...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ACTGGCCACCAAAATCACTACAGATTCTGTACAAGCAAAAGACAAGGCACCAGACCTCAGCTCCACAATTaGCGGGGACTGGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: TGHQNHYRFCTSKRQGTRPQLHN*RGLEVI
Trigger: GATGACTTCCAGTCCCCGCCAATTGTGGAGCTGAGG...TCTGGTGCCTTGTCTTTTGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTGTCACCTCCCCTTGTaGGTTGTCATCCAAGTCACC +
Preference number: 4 (lower is better)
Translates to: EVGLRNGWHLLATKITTDCHLPL*VVIQVT
Trigger: GGTGACTTGGATGACAACCCACAAGGGGAGGTGACA...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGACAGGGTCATACAGGATaGAGAAGGCCAATTCCAACA +
Preference number: 4 (lower is better)
Translates to: VCSDICMGQRDLVALKTRQGHTG*RRPIPT
Trigger: TGTTGGAATTGGCCTTCTCCATCCTGTATGACCCTG...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAATGGCTGGCATTTACTaGCCACCAAAATCACTACAG +
Preference number: 4 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLEMAGIY*PPKSLQ
Trigger: CTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCAT...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGTTTGAGAAATGGCTaGCATTTACTGGCCACCAAA +
Preference number: 4 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLEGLRNG*HLLATK
Trigger: TTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTACCAAGAGGAAACTCTaGGTGGTCCGAGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSTKRKL*VVRGGF
Trigger: AAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGT...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCGCTGTTTGTTCCTCGTaGCCCAATCCCAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFAVCSS*PNPRLH
Trigger: ATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGC...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTGCTCTGATATCTGTATaGGCCAGAGAGATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LKSWPMAETIALGREGQLALISV*AREIWW
Trigger: CCACCAGATCTCTCTGGCCCATACAGATATCAGAGC...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AATCCATTTCAAGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTTCCCTGCAGCGTTCCTaGAGACTTAAGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NPFQEAVSWTGRQGHLLFSLQRS*RLKRAG
Trigger: TCCTGCCCTCTTAAGTCTCCAGGAACGCTGCAGGGA...AAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGAAATGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ACTGGCCACCAAAATCACTACAGATTCTGTACAAGCAAAAGACAAGGCACCAGAGGGCAGAACTGGCCATaGTTGCTGAGTCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: TGHQNHYRFCTSKRQGTRGQNWP*LLSLGD
Trigger: ATCACCCAGACTCAGCAACCATGGCCAGTTCTGCCC...TCTGGTGCCTTGTCTTTTGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCAACACTCAGAACCCTaGAAGGTCACGATCCATGAC +
Preference number: 4 (lower is better)
Translates to: LKSWPMAETIALGREGQLQHSEP*KVTIHD
Trigger: GTCATGGATCGTGACCTTCCAGGGTTCTGAGTGTTG...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAATTTAAATTAGAGCGATaGAACAGCCTGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLEFKLER*NSLGSA
Trigger: TGCAGACCCCAGGCTGTTCCATCGCTCTAATTTAAA...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR TCA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAATACGCAATTTGCTCTTaGACTGATCCAAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLEYAICS*TDPKSW
Trigger: CCAACTCTTTGGATCAGTTCAAGAGCAAATTGCGTA...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GTTATGTGCCTCTTGATAGAACATAATACCACTGATGACACTGGCCAGGAAAAACCTCAGCCAGCTCCCTaGAATCATGGCCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: VMCLLIEHNTTDDTGQEKPQPAP*NHGQWQ
Trigger: CTGCCATTGGCCATGATTTCAGGGAGCTGGCTGAGG...TTTTTCCTGGCCAGTGTCATCAGTGGTATTATGTTCTATCAAGAGGCACATAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR TCA 90 bp GCGATGAAGTTTAAGGTCTCATCAGGGTCATACAGGATGGAGAAGGCCAATTCCCAAACCTTAGTTGACTaGTGGAATGAGGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: AMKFKVSSGSYRMEKANSQTLVD*WNEALS
Trigger: GCTCAGTGCCTCATTCCATCAGTCAACTAAGGTTTG...GGAATTGGCCTTCTCCATCCTGTATGACCCTGATGAGACCTTAAACTTCATCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR GCA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGACAGCTGAGGACCATCTaGATAACGGAGGGTATAATA +
Preference number: 4 (lower is better)
Translates to: VCSDICMGQRDLVALKTRQLRTI*ITEGII
Trigger: TATTATACCCTCCGTTATGCAGATGGTCCTCAGCTG...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp GAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCTGGCTCACATACCCTaGAATCTGCTTAATAAAGGT +
Preference number: 4 (lower is better)
Translates to: ETERLQGEISVCSDICMGLAHIP*NLLNKG
Trigger: ACCTTTATTAAGCAGATTGCAGGGTATGTGAGCCAG...GCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGCCGGAGATGCTTCTGTaGAAATGCATTTGCCATATC +
Preference number: 4 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLPEMLL*KCICHI
Trigger: GATATGGCAAATGCATTTGCACAGAAGCATCTCCGG...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp AGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTGTTCCTCGTGGAGACTCTGCGTCAAATaGAATCCTCCTCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: RSSFLDWKARASAVCSSWRLCVK*NPPQFK
Trigger: TTTGAACTGAGGAGGATTGCATTTGACGCAGAGTCT...CCACGAGGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp AAAGCACCGAGGGATAACTATCGATTAAGTACCCAGGGTGTGCACATCATGCCAGGTAGTTCCCCAACCTaGAGGATTTCACAGAGCATT +
Preference number: 4 (lower is better)
Translates to: KAPRDNYRLSTQGVHIMPGSSPT*RISQSI
Trigger: AATGCTCTGTGAAATCCTGCAGGTTGGGGAACTACC...TGGCATGATGTGCACACCCTGGGTACTTAATCGATAGTTATCCCTCGGTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp GCGATGAAGTTTAAGGTCTCATCAGGGTCATACAGGATGGAGAAGGCCAATTCCGGTAGTTCCCCAACCTaGAGGATTTCACAGAGCATT +
Preference number: 4 (lower is better)
Translates to: AMKFKVSSGSYRMEKANSGSSPT*RISQSI
Trigger: AATGCTCTGTGAAATCCTGCAGGTTGGGGAACTACC...GGAATTGGCCTTCTCCATCCTGTATGACCCTGATGAGACCTTAAACTTCATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR GCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTTCGGGTGGTAGTCATTaGGTCCTTCATTTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: WSEVGLRNGWHLLATKITSGGSH*VLHLVV
Trigger: AACTACCAAATGAAGGACGCAATGACTACCACCCGA...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGAAAAGCTCGAGTGATTTaGTCTCGGACGACTTGCATA +
Preference number: 4 (lower is better)
Translates to: VCSDICMGQRDLVALKTRKARVI*SRTTCI
Trigger: TATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTT...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGGGAGAAATTTCCGTCTaGTCTGATATCTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWGEISV*SDICMG
Trigger: GCCCATACAGATATCAGAGCAGACGGAAATTTCTCC...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp AATCCATTTCAAGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTCAGCTGGGTTTTCCCTaGAGCGTTCCTGGAGACTTA +
Preference number: 4 (lower is better)
Translates to: NPFQEAVSWTGRQGHLLFQLGFP*SVPGDL
Trigger: TAAGTCTCCAGGAACGCTGCAGGGAAAACCCAGCTG...AAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGAAATGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTGAATCTCCTGGTTaGAGACCTGGAGGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: EVGLRNGWHLLATKITTDSESPG*RPGGVR
Trigger: TCTCACACCTCCAGGTCTCCAACCAGGAGATTCAGA...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CCA 90 bp AGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTGTTCCTCGTGGGGTAAAGTCCATGGCTaGATTGATGTGGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: RSSFLDWKARASAVCSSWGKVHG*IDVVGK
Trigger: TTTACCAACCACATCAATCCAGCCATGGACTTTACC...CCACGAGGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGGTCTTGTTCAACAGCTaGATGCAGATTCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWVLFNS*MQIPKS
Trigger: GCTCTTTGGAATCTGCATCCAGCTGTTGAACAAGAC...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTATGGCTGGCATTTACTaGCCACCAAAATCACTACAG +
Preference number: 4 (lower is better)
Translates to: WSEVGLRNGWHLLATKITMAGIY*PPKSLQ
Trigger: CTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCAT...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGGTGGGTTTGAGAAATaGCTGGCATTTACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEAGGFEK*LAFTGH
Trigger: GTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ACTGGCCACCAAAATCACTACAGATTCTGTACAAGCAAAAGACAAGGCACCAGAAGAGGAAACTCTGGGTaGTCCGAGGTGGGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: TGHQNHYRFCTSKRQGTRRGNSG*SEVGLR
Trigger: TCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCT...TCTGGTGCCTTGTCTTTTGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTAGAAAAGGTATTAATGTaGGGGAAGAGCAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLEKVLM*GKSSRI
Trigger: GATTCTACTGCTCTTCCCCCACATTAATACCTTTTC...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGAGAGGCTGTGTGTGTaGTTTACAAGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEAERLCV*FTSAAA
Trigger: TGCTGCAGCACTTGTAAACCACACACACAGCCTCTC...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTCTCTCCAAGTATCACTaGGCCAGCTACTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSLSKYH*ASYSNW
Trigger: CCAGTTTGAGTAGCTGGCCCAGTGATACTTGGAGAG...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGCTGCAATTCAGGTTAAAGTTAAACCTGAACTaGATCAAACCTCTAGATCCC +
Preference number: 4 (lower is better)
Translates to: WGLEGQRKANWRGLQFRLKLNLN*IKPLDP
Trigger: GGGATCTAGAGGTTTGATCCAGTTCAGGTTTAACTT...TAACCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR TCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGTACGCAATTTGCTCTTaGACTGATCCAAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWYAICS*TDPKSW
Trigger: CCAACTCTTTGGATCAGTTCAAGAGCAAATTGCGTA...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTGTAAGCACCCTGCCTTCATaGCTCTTAGTAGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: GLRNGWHLLATKITTDSVSTLPS*LLVDRD
Trigger: GTCCCTGTCTACTAAGAGTCATGAAGGCAGGGTGCT...TACAGAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTCTCAGGAGGAAAAGGTaGGTGGCTGTTGTTAAATCC +
Preference number: 4 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSLRRKR*VAVVKS
Trigger: GGATTTAACAACAGCCACTCACCTTTTCCTCCTGAG...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCACTCAGGAGGAAAAGGTaGGTGGCTGTTGTTAAATCC +
Preference number: 4 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEALRRKR*VAVVKS
Trigger: GGATTTAACAACAGCCACTCACCTTTTCCTCCTGAG...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CAGAAGGGCACTGAGGCCATCAATCCAGATGCAGTACTCATATTTATTAGGTGCCTCAGGAGGAAAAGGTaGGTGGCTGTTGTTAAATCC +
Preference number: 4 (lower is better)
Translates to: QKGTEAINPDAVLIFIRCLRRKR*VAVVKS
Trigger: GGATTTAACAACAGCCACTCACCTTTTCCTCCTGAG...GCACCTAATAAATATGAGTACTGCATCTGGATTGATGGCCTCAGTGCCCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR GCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTCTGGCTCACATACCCTaGAATCTGCTTAATAAAGGT +
Preference number: 4 (lower is better)
Translates to: WSEVGLRNGWHLLATKITLAHIP*NLLNKG
Trigger: ACCTTTATTAAGCAGATTGCAGGGTATGTGAGCCAG...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCAATGCTTCTGTGCAAATaGATTTGCCATATCCTGTCG +
Preference number: 4 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPMLLCK*ICHILS
Trigger: CGACAGGATATGGCAAATGCATTTGCACAGAAGCAT...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp GCCAGTCCACTCTTCTCTCCTAACCTTCCCAGTTCACAAAACTACAGCAGTACCATGCTTCTGTGCAAATaGATTTGCCATATCCTGTCG +
Preference number: 4 (lower is better)
Translates to: ASPLFSPNLPSSQNYSSTMLLCK*ICHILS
Trigger: CGACAGGATATGGCAAATGCATTTGCACAGAAGCAT...GGTACTGCTGTAGTTTTGTGAACTGGGAAGGTTAGGAGAGAAGAGTGGACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR GCA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGAAGACTCTGCGTCAAATaGAATCCTCCTCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGRLCVK*NPPQFK
Trigger: TTTGAACTGAGGAGGATTGCATTTGACGCAGAGTCT...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTGCTAGGATCAGACTCTaGGTCAAATGCAATCCTCCT +
Preference number: 4 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSARIRL*VKCNPP
Trigger: AGGAGGATTGCATTTGACGCAGAGTCTGATCCTAGC...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTTTGTGTACATGGCTTTaGGTTTTTCGGTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSLCTWL*VFRSHS
Trigger: GGAGTGGGACCGAAAAACGCAAAGCCATGTACACAA...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CAGCAGTACCTGCACAGTAAGCACTCAATAAACCACAGTGAGTCTTCTAATGCTTCTGAATCTCCTGGTTaGAGACCTGGAGGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: QQYLHSKHSINHSESSNASESPG*RPGGVR
Trigger: TCTCACACCTCCAGGTCTCCAACCAGGAGATTCAGA...AGCATTAGAAGACTCACTGTGGTTTATTGAGTGCTTACTGTGCAGGTACTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CCA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTTTGAGCCTGGTCATTaGGGTCCATCTTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFFEPGH*GPSWSS
Trigger: TGATGACCAAGATGGACCCCAATGACCAGGCTCAAA...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTTTGAGCCTGGTCATTaGGGTCCATCTTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: EVGLRNGWHLLATKITTDFEPGH*GPSWSS
Trigger: TGATGACCAAGATGGACCCCAATGACCAGGCTCAAA...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCAGGTAAAGTCCATGGCTaGATTGATGTGGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPGKVHG*IDVVGK
Trigger: TTTACCAACCACATCAATCCAGCCATGGACTTTACC...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGAGGTAAAGTCCATGGCTaGATTGATGTGGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: VCSDICMGQRDLVALKTRGKVHG*IDVVGK
Trigger: TTTACCAACCACATCAATCCAGCCATGGACTTTACC...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTTTCATGGTGATGGAGTaGGCAGAGCACCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GKGEWLLLNPFQEAVSWTFMVME*AEHPAF
Trigger: GAAGGCAGGGTGCTCTGCCCACTCCATCACCATGAA...AGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTTCCCTGCAGCGTTCCTaGAGACTTAAGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GKGEWLLLNPFQEAVSWTSLQRS*RLKRAG
Trigger: TCCTGCCCTCTTAAGTCTCCAGGAACGCTGCAGGGA...AGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ACTGGCCACCAAAATCACTACAGATTCTGTACAAGCAAAAGACAAGGCACCAGACAAAGGAAAGCAAACTaGAGGGGGCTGCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: TGHQNHYRFCTSKRQGTRQRKAN*RGLQFR
Trigger: CCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTG...TCTGGTGCCTTGTCTTTTGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGAAAAAACCACCACCAATaGCACTCTCCAAGTATCACT +
Preference number: 4 (lower is better)
Translates to: VCSDICMGQRDLVALKTRKNHHQ*HSPSIT
Trigger: AGTGATACTTGGAGAGTGCCATTGGTGGTGGTTTTT...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTAGAGAAACAAGTGGATaGGCAGAACTGGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSRETSG*AELAMV
Trigger: AACCATGGCCAGTTCTGCCCATCCACTTGTTTCTCT...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR TCA 90 bp GGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTGGTCCGAGGTGGGTTTaGGAAATGGCTGGCATTTAC +
Preference number: 4 (lower is better)
Translates to: GKGEWLLLNPFQEAVSWTGPRWV*EMAGIY
Trigger: GTAAATGCCAGCCATTTCTCAAACCCACCTCGGACC...AGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCTGGCTCACATACCCTaGAATCTGCTTAATAAAGGT +
Preference number: 4 (lower is better)
Translates to: LKSWPMAETIALGREGQLLAHIP*NLLNKG
Trigger: ACCTTTATTAAGCAGATTGCAGGGTATGTGAGCCAG...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTACAGGAATTTTCTCCTaGAGGGATTCAAATGTCACC +
Preference number: 4 (lower is better)
Translates to: LKSWPMAETIALGREGQLTGIFS*RDSNVT
Trigger: GGTGACATTTGAATCCCTGCAGGAGAAAATTCCTGT...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCAAATGGCCTTAATGTCTaGAACAGGAATTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPNGLNV*NRNFLL
Trigger: CAGGAGAAAATTCCTGTTGCAGACATTAAGGCCATT...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCGGAGAAATTTCCGTCTaGTCTGATATCTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFGEISV*SDICMG
Trigger: GCCCATACAGATATCAGAGCAGACGGAAATTTCTCC...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCATAGAGAGGGGAAGATaGCAAGAATGCACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFIERGR*QECTWK
Trigger: TTTCCAGGTGCATTCTTGGCATCTTCCCCTCTCTAT...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR GCA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCCTTCAGCTAATAAACTaGAAAGGAAAAGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: ACREKFPSALISVWAREILQLIN*KGKDGG
Trigger: CCCACCATCTTTTCCTTTGCAGTTTATTAGCTGAAG...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR GCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATAACTTACCCACTCCCTaGCCAAGTCACATCAAAGAT +
Preference number: 4 (lower is better)
Translates to: EVGLRNGWHLLATKITTDNLPTP*PSHIKD
Trigger: ATCTTTGATGTGACTTGGGCAGGGAGTGGGTAAGTT...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR GCA 90 bp GTTATGTGCCTCTTGATAGAACATAATACCACTGATGACACTGGCCAGGAAAAAGAACAGCCTGGGGTCTaGACATCAAGATCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VMCLLIEHNTTDDTGQEKEQPGV*TSRSWP
Trigger: TGGCCAAGATCTTGATGTGCAGACCCCAGGCTGTTC...TTTTTCCTGGCCAGTGTCATCAGTGGTATTATGTTCTATCAAGAGGCACATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp CACTCAATAAACCACAGTGAGTCTTCTAATGCTTATCCTCCTGACCTCTCTGGATTTGAGCCTGGTCATTaGGGTCCATCTTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: HSINHSESSNAYPPDLSGFEPGH*GPSWSS
Trigger: TGATGACCAAGATGGACCCCAATGACCAGGCTCAAA...TCCAGAGAGGTCAGGAGGATAAGCATTAGAAGACTCACTGTGGTTTATTGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CCA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCAGTCCTTTGTGTACATaGCTTTGCGTTTTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFSPLCT*LCVFRS
Trigger: GGACCGAAAAACGCAAAGCCATGTACACAAAGGACT...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCGTCTTGTTCAACAGCTaGATGCAGATTCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFVLFNS*MQIPKS
Trigger: GCTCTTTGGAATCTGCATCCAGCTGTTGAACAAGAC...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ACTGGCCACCAAAATCACTACAGATTCTGTACAAGCAAAAGACAAGGCACCAGACAGGGTCATACAGGATaGAGAAGGCCAATTCCAACA +
Preference number: 4 (lower is better)
Translates to: TGHQNHYRFCTSKRQGTRQGHTG*RRPIPT
Trigger: TGTTGGAATTGGCCTTCTCCATCCTGTATGACCCTG...TCTGGTGCCTTGTCTTTTGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATATGGCTGGCATTTACTaGCCACCAAAATCACTACAG +
Preference number: 4 (lower is better)
Translates to: EVGLRNGWHLLATKITTDMAGIY*PPKSLQ
Trigger: CTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCAT...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTTATGTGCCTCTTGATAGAACATAATACCACTGATGACACTGGCCAGGAAAAAGCTGTTTGTTCCTCGTaGCCCAATCCCAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: VMCLLIEHNTTDDTGQEKAVCSS*PNPRLH
Trigger: ATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGC...TTTTTCCTGGCCAGTGTCATCAGTGGTATTATGTTCTATCAAGAGGCACATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGGGAGGAAAAGGTGAGTaGCTGTTGTTAAATCCATTT +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWGGKGE*LLLNPF
Trigger: AAATGGATTTAACAACAGCCACTCACCTTTTCCTCC...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGGAGGAAAAGGTGAGTaGCTGTTGTTAAATCCATTT +
Preference number: 4 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLGGKGE*LLLNPF
Trigger: AAATGGATTTAACAACAGCCACTCACCTTTTCCTCC...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGAGGAGGAAAAGGTGAGTaGCTGTTGTTAAATCCATTT +
Preference number: 4 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGGGKGE*LLLNPF
Trigger: AAATGGATTTAACAACAGCCACTCACCTTTTCCTCC...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTGTAGAAGCAGCAACGTCTTaGCACCATATGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GLRNGWHLLATKITTDSVEAATS*HHMKLE
Trigger: CTCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTC...TACAGAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTGTAAGGTCTTTGACTTGCTaGGATGAGACTGAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GLRNGWHLLATKITTDSVRSLTC*DETERL
Trigger: CAAGCGCTCAGTCTCATCCCAGCAAGTCAAAGACCT...TACAGAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTGAAAAGGTATTAATGTaGGGGAAGAGCAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: WSEVGLRNGWHLLATKITEKVLM*GKSSRI
Trigger: GATTCTACTGCTCTTCCCCCACATTAATACCTTTTC...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGAGAAAAGGTATTAATGTaGGGGAAGAGCAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGEKVLM*GKSSRI
Trigger: GATTCTACTGCTCTTCCCCCACATTAATACCTTTTC...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
3UTR CAA 72 bp GTGGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTaGGACTGGAAGGCAAGGGCATCTGCTGTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: VAVVKSISRSSF*DWKARASAVCS
Trigger: GGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTTACGCAATTTGCTCTTaGACTGATCCAAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSYAICS*TDPKSW
Trigger: CCAACTCTTTGGATCAGTTCAAGAGCAAATTGCGTA...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTACGCAATTTGCTCTTaGACTGATCCAAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: EVGLRNGWHLLATKITTDYAICS*TDPKSW
Trigger: CCAACTCTTTGGATCAGTTCAAGAGCAAATTGCGTA...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTATTATAGACCGGAGATaGTTCTGTGCAAATGCATTT +
Preference number: 4 (lower is better)
Translates to: WSEVGLRNGWHLLATKITIIDRR*FCANAF
Trigger: AAATGCATTTGCACAGAAGCATCTCCGGTCTATAAT...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCACAGGAATTTTCTCCTaGAGGGATTCAAATGTCACC +
Preference number: 4 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFTGIFS*RDSNVT
Trigger: GGTGACATTTGAATCCCTGCAGGAGAAAATTCCTGT...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TCCCAGTTCACAAAACTACAGCAGTACCTGCACAGTAAGCACTCAATAAACCACAGTCCTTTGTGTACATaGCTTTGCGTTTTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SQFTKLQQYLHSKHSINHSPLCT*LCVFRS
Trigger: GGACCGAAAAACGCAAAGCCATGTACACAAAGGACT...GTGGTTTATTGAGTGCTTACTGTGCAGGTACTGCTGTAGTTTTGTGAACTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CCA 90 bp ACTGGCCACCAAAATCACTACAGATTCTGTACAAGCAAAAGACAAGGCACCAGAAGTCCTTTGTGTACATaGCTTTGCGTTTTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: TGHQNHYRFCTSKRQGTRSPLCT*LCVFRS
Trigger: GGACCGAAAAACGCAAAGCCATGTACACAAAGGACT...TCTGGTGCCTTGTCTTTTGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp TCCCAGTTCACAAAACTACAGCAGTACCTGCACAGTAAGCACTCAATAAACCACGTCTTGTTCAACAGCTaGATGCAGATTCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SQFTKLQQYLHSKHSINHVLFNS*MQIPKS
Trigger: GCTCTTTGGAATCTGCATCCAGCTGTTGAACAAGAC...GTGGTTTATTGAGTGCTTACTGTGCAGGTACTGCTGTAGTTTTGTGAACTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CCA 90 bp GGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTGAAGCAGCAACGTCTTaGCACCATATGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GKGEWLLLNPFQEAVSWTEAATS*HHMKLE
Trigger: CTCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTC...AGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTCAAAGGAAAGCAAACTaGAGGGGGCTGCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: GKGEWLLLNPFQEAVSWTQRKAN*RGLQFR
Trigger: CCTGAATTGCAGCCCCCTCCAGTTTGCTTTCCTTTG...AGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTACACACACACAAAATTaGTCACTGTTGCATGATACC +
Preference number: 4 (lower is better)
Translates to: LKSWPMAETIALGREGQLTHTQN*SLLHDT
Trigger: GGTATCATGCAACAGTGACCAATTTTGTGTGTGTGT...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR GCA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGACATACCCTGCAATCTaGTTAATAAAGGTGATTGAA +
Preference number: 4 (lower is better)
Translates to: REKFPSALISVWAREIWWTYPAI*LIKVIE
Trigger: TTCAATCACCTTTATTAAGCAGATTGCAGGGTATGT...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp AATCCATTTCAAGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTCTGTGCAAATGCATTTaGCATATCCTGTCGTTTGTC +
Preference number: 4 (lower is better)
Translates to: NPFQEAVSWTGRQGHLLFLCKCI*HILSFV
Trigger: GACAAACGACAGGATATGGCAAATGCATTTGCACAG...AAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGAAATGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp ACTGGCCACCAAAATCACTACAGATTCTGTACAAGCAAAAGACAAGGCACCAGACTGTGCAAATGCATTTaGCATATCCTGTCGTTTGTC +
Preference number: 4 (lower is better)
Translates to: TGHQNHYRFCTSKRQGTRLCKCI*HILSFV
Trigger: GACAAACGACAGGATATGGCAAATGCATTTGCACAG...TCTGGTGCCTTGTCTTTTGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp ACTGGCCACCAAAATCACTACAGATTCTGTACAAGCAAAAGACAAGGCACCAGAATGCTTCTGTGCAAATaGATTTGCCATATCCTGTCG +
Preference number: 4 (lower is better)
Translates to: TGHQNHYRFCTSKRQGTRMLLCK*ICHILS
Trigger: CGACAGGATATGGCAAATGCATTTGCACAGAAGCAT...TCTGGTGCCTTGTCTTTTGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAAATGGCCTTAATGTCTaGAACAGGAATTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEANGLNV*NRNFLL
Trigger: CAGGAGAAAATTCCTGTTGCAGACATTAAGGCCATT...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATGGAGGAAAAGGTGAGTaGCTGTTGTTAAATCCATTT +
Preference number: 4 (lower is better)
Translates to: EVGLRNGWHLLATKITTDGGKGE*LLLNPF
Trigger: AAATGGATTTAACAACAGCCACTCACCTTTTCCTCC...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGAAAAGGTATTAATGTaGGGGAAGAGCAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEAEKVLM*GKSSRI
Trigger: GATTCTACTGCTCTTCCCCCACATTAATACCTTTTC...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GTTATGTGCCTCTTGATAGAACATAATACCACTGATGACACTGGCCAGGAAAAAAAGGAGAGAAACAAGTaGATGGGCAGAACTGGCCAT +
Preference number: 4 (lower is better)
Translates to: VMCLLIEHNTTDDTGQEKKERNK*MGRTGH
Trigger: ATGGCCAGTTCTGCCCATCCACTTGTTTCTCTCCTT...TTTTTCCTGGCCAGTGTCATCAGTGGTATTATGTTCTATCAAGAGGCACATAAC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCGTGCTAATGGACTGGTaGCAATGTTATACACTATAC +
Preference number: 4 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFVLMDW*QCYTLY
Trigger: GTATAGTGTATAACATTGCCACCAGTCCATTAGCAC...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CCA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATACCAGTCTTAGACTCTaGTTTAGACAAGATGGGTAT +
Preference number: 4 (lower is better)
Translates to: EVGLRNGWHLLATKITTDTSLRL*FRQDGY
Trigger: ATACCCATCTTGTCTAAACCAGAGTCTAAGACTGGT...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR TCA 90 bp GGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTGTATACGCAATTTGCTCTTaGACTGATCCAAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GLRNGWHLLATKITTDSVYAICS*TDPKSW
Trigger: CCAACTCTTTGGATCAGTTCAAGAGCAAATTGCGTA...TACAGAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR GCA 90 bp GGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTGTAAGACTCTGCGTCAAATaGAATCCTCCTCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: GLRNGWHLLATKITTDSVRLCVK*NPPQFK
Trigger: TTTGAACTGAGGAGGATTGCATTTGACGCAGAGTCT...TACAGAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp GGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTGGTTTGAGAAATGGCTaGCATTTACTGGCCACCAAA +
Preference number: 4 (lower is better)
Translates to: GKGEWLLLNPFQEAVSWTGLRNG*HLLATK
Trigger: TTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC...AGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ACTGGCCACCAAAATCACTACAGATTCTGTACAAGCAAAAGACAAGGCACCAGAGAAAAGGTATTAATGTaGGGGAAGAGCAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: TGHQNHYRFCTSKRQGTREKVLM*GKSSRI
Trigger: GATTCTACTGCTCTTCCCCCACATTAATACCTTTTC...TCTGGTGCCTTGTCTTTTGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR TCA 90 bp GGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTGTAGGGCGGGGGAACTTATaGATTAAGAAACTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: GLRNGWHLLATKITTDSVGRGNL*IKKLKR
Trigger: TCTTTTAAGTTTCTTAATTCATAAGTTCCCCCGCCC...TACAGAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR GCA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTACATACCCTGCAATCTaGTTAATAAAGGTGATTGAA +
Preference number: 4 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSTYPAI*LIKVIE
Trigger: TTCAATCACCTTTATTAAGCAGATTGCAGGGTATGT...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR GCA 90 bp CACTCAATAAACCACAGTGAGTCTTCTAATGCTTATCCTCCTGACCTCTCTGGAATTATAGACCGGAGATaGTTCTGTGCAAATGCATTT +
Preference number: 4 (lower is better)
Translates to: HSINHSESSNAYPPDLSGIIDRR*FCANAF
Trigger: AAATGCATTTGCACAGAAGCATCTCCGGTCTATAAT...TCCAGAGAGGTCAGGAGGATAAGCATTAGAAGACTCACTGTGGTTTATTGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CCA 90 bp GGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTGGTAAAGTCCATGGCTaGATTGATGTGGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: GKGEWLLLNPFQEAVSWTGKVHG*IDVVGK
Trigger: TTTACCAACCACATCAATCCAGCCATGGACTTTACC...AGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CCA 90 bp ACAATCAGCAAAATTCAGATGCTAGGAAACTACCAAACAAGCAATCTGGTTCTTTGTGTGCTAATGGACTaGTGGCAATGTTATACACTA +
Preference number: 4 (lower is better)
Translates to: TISKIQMLGNYQTSNLVLCVLMD*WQCYTL
Trigger: TAGTGTATAACATTGCCACCAGTCCATTAGCACACA...AAGAACCAGATTGCTTGTTTGGTAGTTTCCTAGCATCTGAATTTTGCTGATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CAA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGATGGGCCATCTCAGTTTaGATGGGGCGGTTCCCTCGG +
Preference number: 5 (lower is better)
Translates to: WASCCSRGDPADQRAGSGWAISV*MGRFPR
Trigger: CCGAGGGAACCGCCCCATCAAAACTGAGATGGCCCA...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CAA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGACCACTCCCAGGGGCATaGCTAGGATCAGACTCTGCG +
Preference number: 5 (lower is better)
Translates to: WASCCSRGDPADQRAGSGPLPGA*LGSDSA
Trigger: CGCAGAGTCTGATCCTAGCAATGCCCCTGGGAGTGG...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGTTCCTGGGCCAGCTGTaGCTCACGTGGGGATCCAGC +
Preference number: 5 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQFLGQL*LTWGSS
Trigger: GCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGAA...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACTGGGCCATCTCAGTTTaGATGGGGCGGTTCCCTCGG +
Preference number: 5 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHWAISV*MGRFPR
Trigger: CCGAGGGAACCGCCCCATCAAAACTGAGATGGCCCA...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CAA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGCCACTCCCAGGGGCATaGCTAGGATCAGACTCTGCG +
Preference number: 5 (lower is better)
Translates to: GKANFLGSGRPKESKLEGPLPGA*LGSDSA
Trigger: CGCAGAGTCTGATCCTAGCAATGCCCCTGGGAGTGG...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGCCACTCCCAGGGGCATaGCTAGGATCAGACTCTGCG +
Preference number: 5 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQPLPGA*LGSDSA
Trigger: CGCAGAGTCTGATCCTAGCAATGCCCCTGGGAGTGG...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGACCCTCAGCTCCACAATaGGCGGGGACTGGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: WASCCSRGDPADQRAGSGPSAPQ*AGTGSH
Trigger: ATGACTTCCAGTCCCCGCCAATTGTGGAGCTGAGGG...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCGTGTCCAGGTCACTCTaGGTCAGCTCACTGGACATG +
Preference number: 5 (lower is better)
Translates to: TGVASAGLSQLPEIMANGVSRSL*VSSLDM
Trigger: CATGTCCAGTGAGCTGACCAAGAGTGACCTGGACAC...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTCCTGGGCCAGCTGTaGCTCACGTGGGGATCCAGC +
Preference number: 5 (lower is better)
Translates to: GTKRKLWVVRGGFEKWLAFLGQL*LTWGSS
Trigger: GCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGAA...TGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGTGTCCAGGTCACTCTaGGTCAGCTCACTGGACATG +
Preference number: 5 (lower is better)
Translates to: WASCCSRGDPADQRAGSGVSRSL*VSSLDM
Trigger: CATGTCCAGTGAGCTGACCAAGAGTGACCTGGACAC...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATTCCTGGGCCAGCTGTaGCTCACGTGGGGATCCAGC +
Preference number: 5 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGFLGQL*LTWGSS
Trigger: GCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGAA...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGTTCCTGGGCCAGCTGTaGCTCACGTGGGGATCCAGC +
Preference number: 5 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWFLGQL*LTWGSS
Trigger: GCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGAA...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGCCCTCAGCTCCACAATaGGCGGGGACTGGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWPSAPQ*AGTGSH
Trigger: ATGACTTCCAGTCCCCGCCAATTGTGGAGCTGAGGG...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGGTACCAGAACCGTTCTaGCCTTCGGCGGTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: GKANFLGSGRPKESKLEGVPEPF*PSAVPN
Trigger: ATTGGGAACCGCCGAAGGCAAGAACGGTTCTGGTAC...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGCCATGTACCAGAACCGTTCTaGCCTTCGGCGGTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: GPKSLLLGTVVSGSRLSHVPEPF*PSAVPN
Trigger: ATTGGGAACCGCCGAAGGCAAGAACGGTTCTGGTAC...ATGGCTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CAA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCAGAAGCAGCAACGTCTaGGCACCATATGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: TGVASAGLSQLPEIMANGRSSNV*APYEAG
Trigger: TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCT...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTCTTGTGCCGGAGACACTGACCTaGTTGAAGTCCTCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: QREQQPDGAEAPQCLSLVPETLT*LKSSAV
Trigger: AACAGCAGAGGACTTCAACAAGGTCAGTGTCTCCGG...CACAAGACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp AGGTCACAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTAAGGGGCATTCATGTTaGTCTTCCCGGCTACTGTTC +
Preference number: 5 (lower is better)
Translates to: RSQREQQPDGAEAPQCLSKGHSC*SSRLLF
Trigger: GAACAGTAGCCGGGAAGACAAACATGAATGCCCCTT...ACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTGTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGTTCAGGCGCTGCTGCTaGATCAGCTCAAGGATCTCG +
Preference number: 5 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWFRRCC*ISSRIS
Trigger: CGAGATCCTTGAGCTGATCAAGCAGCAGCGCCTGAA...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGATGGTCCGAGGTGGGTTaGAGAAATGGCTGGCATTTA +
Preference number: 5 (lower is better)
Translates to: WASCCSRGDPADQRAGSGWSEVG*RNGWHL
Trigger: TAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CCTGGGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGTGGTCCGAGGTGGGTTaGAGAAATGGCTGGCATTTA +
Preference number: 5 (lower is better)
Translates to: PGPKIPSPGYRRFWLQAQWSEVG*RNGWHL
Trigger: TAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA...CTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CAA 90 bp GGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTGGCAAAGGGCATCTGCTGTTaGTTCCTCGTGGCCCAATCC +
Preference number: 5 (lower is better)
Translates to: GTKRKLWVVRGGFEKWLAKGICC*FLVAQS
Trigger: GGATTGGGCCACGAGGAACAAACAGCAGATGCCCTT...TGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp AGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTGTTCCTCGTGGTTCCTGGGCCAGCTGTaGCTCACGTGGGGATCCAGC +
Preference number: 5 (lower is better)
Translates to: RSSFLDWKARASAVCSSWFLGQL*LTWGSS
Trigger: GCTGGATCCCCACGTGAGCAACAGCTGGCCCAGGAA...CCACGAGGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS GCA 90 bp TGGGTTGTCATCCAAGTCACCATAGTGAAGGACCTTGTGGTTCAGTaGCAACCGGCAGTACCAGAACCGTTCTTGCCTTCGGCGGTTCCC +
Preference number: 5 (lower is better)
Translates to: WVVIQVTIVKDLVVQ*QPAVPEPFLPSAVP
Trigger: GGGAACCGCCGAAGGCAAGAACGGTTCTGGTACTGCCGGTTGGCACTGAACCACAAGGTCCTTCACTATGGTGACTTGGATGACAACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290246.11
ENST00000352077.6
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000464448.1
ENST00000467800.5
CDS-3UTR CAA 90 bp GAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCACGTCGGCAGAGAGCTaGGCCAGCTCCTTCATGGCA +
Preference number: 5 (lower is better)
Translates to: ETERLQGEISVCSDICMGTSAES*ASSFMA
Trigger: TGCCATGAAGGAGCTGGCCAAGCTCTCTGCCGACGT...GCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CAA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGATTTGTGTACATGGCTTaGCGTTTTTCGGTCCCACTC +
Preference number: 5 (lower is better)
Translates to: WASCCSRGDPADQRAGSGFVYMA*RFSVPL
Trigger: GAGTGGGACCGAAAAACGCAAAGCCATGTACACAAA...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCCAAGTCCATGGCTGGATaGATGTGGTTGGTAAATCCC +
Preference number: 5 (lower is better)
Translates to: CGLQVLQHQGSPTGTGVAKSMAG*MWLVNP
Trigger: GGGATTTACCAACCACATCAATCCAGCCATGGACTT...GGCCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGAAGGGGCATTCATGTTaGTCTTCCCGGCTACTGTTC +
Preference number: 5 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQKGHSC*SSRLLF
Trigger: GAACAGTAGCCGGGAAGACAAACATGAATGCCCCTT...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGAGAGAGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACCATTGCGTCCTTCATTaGGTAGTTCCCCAACCTGCA +
Preference number: 5 (lower is better)
Translates to: GERLCVWFTSAAAPGKPHHCVLH*VVPQPA
Trigger: TGCAGGTTGGGGAACTACCAAATGAAGGACGCAATG...GTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACCAAAGCTCGAGTGATTaGCTCTCGGACGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHQSSSD*LSDDLH
Trigger: ATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTTG...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGTACCAGAACCGTTCTaGCCTTCGGCGGTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: ANGRNHSTRKGRPTSWGLVPEPF*PSAVPN
Trigger: ATTGGGAACCGCCGAAGGCAAGAACGGTTCTGGTAC...CAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CAAGGGCATCTGCTGTTTGTTCCTCGTGGCCCAATCCCAGGCTTCATGGTGATGGTACCAGAACCGTTCTaGCCTTCGGCGGTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: QGHLLFVPRGPIPGFMVMVPEPF*PSAVPN
Trigger: ATTGGGAACCGCCGAAGGCAAGAACGGTTCTGGTAC...CATCACCATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGCAGATGCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGTGTCCAGGTCACTCTaGGTCAGCTCACTGGACATG +
Preference number: 5 (lower is better)
Translates to: VPGDLRGQDLARRSLTCWVSRSL*VSSLDM
Trigger: CATGTCCAGTGAGCTGACCAAGAGTGACCTGGACAC...CCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGTGGTCCGAGGTGGGTTaGAGAAATGGCTGGCATTTA +
Preference number: 5 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWWSEVG*RNGWHL
Trigger: TAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CAAGGGCATCTGCTGTTTGTTCCTCGTGGCCCAATCCCAGGCTTCATGGTGATGAAGGGCATCTGCTGTTaGTTCCTCGTGGCCCAATCC +
Preference number: 5 (lower is better)
Translates to: QGHLLFVPRGPIPGFMVMKGICC*FLVAQS
Trigger: GGATTGGGCCACGAGGAACAAACAGCAGATGCCCTT...CATCACCATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGCAGATGCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGAGAGAGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTCAAGAAGCAGTTTCTaGGACTGGAAGGCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: GERLCVWFTSAAAPGKPHSRSSF*DWKARA
Trigger: TGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGA...GTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp ACAGGTGTGGCCTCAGCCGGCCTCAGCCAGCTCCCTGAAATCATGGCCAATGGCGCAAAAGCCTCAGGCTaGTACTCAGATCTAAGATAC +
Preference number: 5 (lower is better)
Translates to: TGVASAGLSQLPEIMANGAKASG*YSDLRY
Trigger: GTATCTTAGATCTGAGTACAAGCCTGAGGCTTTTGC...GCCATTGGCCATGATTTCAGGGAGCTGGCTGAGGCCGGCTGAGGCCACACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGAGAAGCAGCAACGTCTaGGCACCATATGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: GKANFLGSGRPKESKLEGRSSNV*APYEAG
Trigger: TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCT...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGACGTCGGCAGAGAGCTaGGCCAGCTCCTTCATGGCA +
Preference number: 5 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLTSAES*ASSFMA
Trigger: TGCCATGAAGGAGCTGGCCAAGCTCTCTGCCGACGT...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CAA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGAAATATGATGTCCCTTaGAGCCTGGTCATTGGGGTC +
Preference number: 5 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWKYDVP*SLVIGV
Trigger: GACCCCAATGACCAGGCTCAAAGGGACATCATATTT...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGAGAGAGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTTTGTGTACATGGCTTaGCGTTTTTCGGTCCCACTC +
Preference number: 5 (lower is better)
Translates to: GERLCVWFTSAAAPGKPHFVYMA*RFSVPL
Trigger: GAGTGGGACCGAAAAACGCAAAGCCATGTACACAAA...GTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCTCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TCACAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTCTTTTTGTGTACATGGCTTaGCGTTTTTCGGTCCCACTC +
Preference number: 5 (lower is better)
Translates to: SQREQQPDGAEAPQCLSLFVYMA*RFSVPL
Trigger: GAGTGGGACCGAAAAACGCAAAGCCATGTACACAAA...AAGACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp GGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGGAGGGGAAGTCCATGGCTGGATaGATGTGGTTGGTAAATCCC +
Preference number: 5 (lower is better)
Translates to: GKANFLGSGRPKESKLEGKSMAG*MWLVNP
Trigger: GGGATTTACCAACCACATCAATCCAGCCATGGACTT...CCCCTCCAGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAAGTCCATGGCTGGATaGATGTGGTTGGTAAATCCC +
Preference number: 5 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHKSMAG*MWLVNP
Trigger: GGGATTTACCAACCACATCAATCCAGCCATGGACTT...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAATTTCACAGAGCATTTaGGTGAGCTCAATGGCACTG +
Preference number: 5 (lower is better)
Translates to: WASCCSRGDPADQRAGSGISQSI*VSSMAL
Trigger: CAGTGCCATTGAGCTCACCAAAATGCTCTGTGAAAT...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACACTTGCATAACCTTGTaGAAGTCCTCTGCTGTTGCC +
Preference number: 5 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHTCITL*KSSAVA
Trigger: GGCAACAGCAGAGGACTTCAACAAGGTTATGCAAGT...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAACGACTTGCATAACCTaGTTGAAGTCCTCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: WASCCSRGDPADQRAGSGTTCIT*LKSSAV
Trigger: AACAGCAGAGGACTTCAACAAGGTTATGCAAGTCGT...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGTTCAGGCGCTGCTGCTaGATCAGCTCAAGGATCTCG +
Preference number: 5 (lower is better)
Translates to: MAETIALGREGQLPGVWKFRRCC*ISSRIS
Trigger: CGAGATCCTTGAGCTGATCAAGCAGCAGCGCCTGAA...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGTGTCCAGGTCACTCTaGGTCAGCTCACTGGACATG +
Preference number: 5 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTVSRSL*VSSLDM
Trigger: CATGTCCAGTGAGCTGACCAAGAGTGACCTGGACAC...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATGGTCCGAGGTGGGTTaGAGAAATGGCTGGCATTTA +
Preference number: 5 (lower is better)
Translates to: GTKRKLWVVRGGFEKWLAWSEVG*RNGWHL
Trigger: TAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA...TGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGCTGCACATCAAGATCTaGGCCAAAGTCCTAGTGACT +
Preference number: 5 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQLHIKI*AKVLVT
Trigger: AGTCACTAGGACTTTGGCCAAGATCTTGATGTGCAG...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CAA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGATCTGTGCAAATGCATTaGCCATATCCTGTCGTTTGT +
Preference number: 5 (lower is better)
Translates to: WASCCSRGDPADQRAGSGSVQMH*PYPVVC
Trigger: ACAAACGACAGGATATGGCAAATGCATTTGCACAGA...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CAA 90 bp CAGAGGGAGCAACAACCAGATGGGGCTGAGGCTCCCCAGTGCCTCAGTCTTGTGTCTGTGCAAATGCATTaGCCATATCCTGTCGTTTGT +
Preference number: 5 (lower is better)
Translates to: QREQQPDGAEAPQCLSLVSVQMH*PYPVVC
Trigger: ACAAACGACAGGATATGGCAAATGCATTTGCACAGA...CACAAGACTGAGGCACTGGGGAGCCTCAGCCCCATCTGGTTGTTGCTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp CACTCTTCTCTCCTAACCTTCCCAGTTCACAAAACTACAGCAGTACCTGCACAGTGGGCCATCTCAGTTTaGATGGGGCGGTTCCCTCGG +
Preference number: 5 (lower is better)
Translates to: HSSLLTFPVHKTTAVPAQWAISV*MGRFPR
Trigger: CCGAGGGAACCGCCCCATCAAAACTGAGATGGCCCA...CTGTGCAGGTACTGCTGTAGTTTTGTGAACTGGGAAGGTTAGGAGAGAAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGAAATATGATGTCCCTTaGAGCCTGGTCATTGGGGTC +
Preference number: 5 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWKYDVP*SLVIGV
Trigger: GACCCCAATGACCAGGCTCAAAGGGACATCATATTT...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTGTGTACATGGCTTaGCGTTTTTCGGTCCCACTC +
Preference number: 5 (lower is better)
Translates to: GTKRKLWVVRGGFEKWLAFVYMA*RFSVPL
Trigger: GAGTGGGACCGAAAAACGCAAAGCCATGTACACAAA...TGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TGGGCCAGCTGTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGCATTTTGTAGTCCTTaGTGTACATGGCTTTGCGTT +
Preference number: 5 (lower is better)
Translates to: WASCCSRGDPADQRAGSGAFCSP*CTWLCV
Trigger: AACGCAAAGCCATGTACACAAAGGACTACAAAATGC...TCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAACAGCTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATCATTGCGTCCTTCATTaGGTAGTTCCCCAACCTGCA +
Preference number: 5 (lower is better)
Translates to: PGDLRGQDLARRSLTCWDHCVLH*VVPQPA
Trigger: TGCAGGTTGGGGAACTACCAAATGAAGGACGCAATG...ATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGACGACTTGCATAACCTaGTTGAAGTCCTCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWTTCIT*LKSSAV
Trigger: AACAGCAGAGGACTTCAACAAGGTTATGCAAGTCGT...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGTTGCTCTCGGACGACTaGCATAACCTTGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWLLSDD*HNLVEV
Trigger: GACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCAA...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGCCAATTCCAACACCTCCTaGTTCTGTTTCAGAGCACTT +
Preference number: 5 (lower is better)
Translates to: CGLQVLQHQGSPTGTGVANSNTS*FCFRAL
Trigger: AAGTGCTCTGAAACAGAACAAGGAGGTGTTGGAATT...GGCCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
CDS-3UTR CAA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATCAAGAAGCAGTTTCTaGGACTGGAAGGCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGSRSSF*DWKARA
Trigger: TGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGA...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp AGGCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACGCAAAAGCCTCAGGCTaGTACTCAGATCTAAGATAC +
Preference number: 5 (lower is better)
Translates to: RLCVWFTSAAAPGKPHWHAKASG*YSDLRY
Trigger: GTATCTTAGATCTGAGTACAAGCCTGAGGCTTTTGC...GTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CAAGGGCATCTGCTGTTTGTTCCTCGTGGCCCAATCCCAGGCTTCATGGTGATGAGAAGCAGCAACGTCTaGGCACCATATGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: QGHLLFVPRGPIPGFMVMRSSNV*APYEAG
Trigger: TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCT...CATCACCATGAAGCCTGGGATTGGGCCACGAGGAACAAACAGCAGATGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGAGAAGCAGCAACGTCTaGGCACCATATGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLRSSNV*APYEAG
Trigger: TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCT...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGATAGTACACTCTTCATaGGGTAGTACCTACCATGCC +
Preference number: 5 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQIVHSS*GSTYHA
Trigger: GGCATGGTAGGTACTACCCAATGAAGAGTGTACTAT...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAACGTCGGCAGAGAGCTaGGCCAGCTCCTTCATGGCA +
Preference number: 5 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEATSAES*ASSFMA
Trigger: TGCCATGAAGGAGCTGGCCAAGCTCTCTGCCGACGT...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CAA 90 bp GCTGTGTGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGTCTGTGCAAATGCATTaGCCATATCCTGTCGTTTGT +
Preference number: 5 (lower is better)
Translates to: AVCVVYKCCSTREAPLAQSVQMH*PYPVVC
Trigger: ACAAACGACAGGATATGGCAAATGCATTTGCACAGA...CTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CAA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTTGGGCCATCTCAGTTTaGATGGGGCGGTTCCCTCGG +
Preference number: 5 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSWAISV*MGRFPR
Trigger: CCGAGGGAACCGCCCCATCAAAACTGAGATGGCCCA...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CAA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTCCACTCCCAGGGGCATaGCTAGGATCAGACTCTGCG +
Preference number: 5 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSPLPGA*LGSDSA
Trigger: CGCAGAGTCTGATCCTAGCAATGCCCCTGGGAGTGG...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TGTGTGGTTTACAAGTGCTGCAGCACCAGGGAAGCCCCACTGGCACAGGTGTGGGCATTTTGTAGTCCTTaGTGTACATGGCTTTGCGTT +
Preference number: 5 (lower is better)
Translates to: CVVYKCCSTREAPLAQVWAFCSP*CTWLCV
Trigger: AACGCAAAGCCATGTACACAAAGGACTACAAAATGC...CCACACCTGTGCCAGTGGGGCTTCCCTGGTGCTGCAGCACTTGTAAACCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGTTGCTCTCGGACGACTaGCATAACCTTGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLLLSDD*HNLVEV
Trigger: GACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCAA...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGATTTGCTCTCGGACGACTaGCATAACCTTGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: PGDLRGQDLARRSLTCWDLLSDD*HNLVEV
Trigger: GACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCAA...ATCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATTCAGGCGCTGCTGCTaGATCAGCTCAAGGATCTCG +
Preference number: 5 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPFRRCC*ISSRIS
Trigger: CGAGATCCTTGAGCTGATCAAGCAGCAGCGCCTGAA...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTTCAGGCGCTGCTGCTaGATCAGCTCAAGGATCTCG +
Preference number: 5 (lower is better)
Translates to: ACREKFPSALISVWAREIFRRCC*ISSRIS
Trigger: CGAGATCCTTGAGCTGATCAAGCAGCAGCGCCTGAA...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCGTGTCCAGGTCACTCTaGGTCAGCTCACTGGACATG +
Preference number: 5 (lower is better)
Translates to: ACREKFPSALISVWAREIVSRSL*VSSLDM
Trigger: CATGTCCAGTGAGCTGACCAAGAGTGACCTGGACAC...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGGACCAAGAGGAAACTCTGGGTGGTCCGAGGTGGGTTTGAGAAATGGCTGGCAGCAAAAGCCTCAGGCTaGTACTCAGATCTAAGATAC +
Preference number: 5 (lower is better)
Translates to: GTKRKLWVVRGGFEKWLAAKASG*YSDLRY
Trigger: GTATCTTAGATCTGAGTACAAGCCTGAGGCTTTTGC...TGCCAGCCATTTCTCAAACCCACCTCGGACCACCCAGAGTTTCCTCTTGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GTTGCTCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGGCAAAAGCCTCAGGCTaGTACTCAGATCTAAGATAC +
Preference number: 5 (lower is better)
Translates to: VAHVGIQLIREQAQEEKVAKASG*YSDLRY
Trigger: GTATCTTAGATCTGAGTACAAGCCTGAGGCTTTTGC...CACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCGCCATATCCTGTCGTTaGTCCTCAGGAGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: ACREKFPSALISVWAREIAISCR*SSGAFR
Trigger: TCTGAAGGCTCCTGAGGACAAACGACAGGATATGGC...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CAA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGAGCCATATCCTGTCGTTaGTCCTCAGGAGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGAISCR*SSGAFR
Trigger: TCTGAAGGCTCCTGAGGACAAACGACAGGATATGGC...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CAA 90 bp CAGCAGTACCTGCACAGTAAGCACTCAATAAACCACAGTGAGTCTTCTAATGCTCCACTCCCAGGGGCATaGCTAGGATCAGACTCTGCG +
Preference number: 5 (lower is better)
Translates to: QQYLHSKHSINHSESSNAPLPGA*LGSDSA
Trigger: CGCAGAGTCTGATCCTAGCAATGCCCCTGGGAGTGG...AGCATTAGAAGACTCACTGTGGTTTATTGAGTGCTTACTGTGCAGGTACTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGAGCTGGATTGATGTGGTaGGTAAATCCCAGCATTTTG +
Preference number: 5 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGAGLMW*VNPSIL
Trigger: CAAAATGCTGGGATTTACCAACCACATCAATCCAGC...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAAGGGGCATTCATGTTaGTCTTCCCGGCTACTGTTC +
Preference number: 5 (lower is better)
Translates to: SVCSDICMGQRDLVALKTKGHSC*SSRLLF
Trigger: GAACAGTAGCCGGGAAGACAAACATGAATGCCCCTT...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGATTTCACAGAGCATTTaGGTGAGCTCAATGGCACTG +
Preference number: 5 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLISQSI*VSSMAL
Trigger: CAGTGCCATTGAGCTCACCAAAATGCTCTGTGAAAT...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCCATTGCGTCCTTCATTaGGTAGTTCCCCAACCTGCA +
Preference number: 5 (lower is better)
Translates to: SVCSDICMGQRDLVALKTHCVLH*VVPQPA
Trigger: TGCAGGTTGGGGAACTACCAAATGAAGGACGCAATG...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CAGCGTTCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGACGACTTGCATAACCTaGTTGAAGTCCTCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: QRSWRLKRAGLGQEVFDLTTCIT*LKSSAV
Trigger: AACAGCAGAGGACTTCAACAAGGTTATGCAAGTCGT...CAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGAACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGAACGACTTGCATAACCTaGTTGAAGTCCTCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGTTCIT*LKSSAV
Trigger: AACAGCAGAGGACTTCAACAAGGTTATGCAAGTCGT...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp AGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTGTTCCTCGTGGCAAAGCTCGAGTGATTaGCTCTCGGACGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: RSSFLDWKARASAVCSSWQSSSD*LSDDLH
Trigger: ATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTTG...CCACGAGGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTCCCTCAGCTCCACAATaGGCGGGGACTGGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSPSAPQ*AGTGSH
Trigger: ATGACTTCCAGTCCCCGCCAATTGTGGAGCTGAGGG...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TCACGTGGGGATCCAGCTGATCAGAGAGCAGGCTCAGGAGGAAAAGGTGAGTGGAATTCCAACACCTCCTaGTTCTGTTTCAGAGCACTT +
Preference number: 5 (lower is better)
Translates to: SRGDPADQRAGSGGKGEWNSNTS*FCFRAL
Trigger: AAGTGCTCTGAAACAGAACAAGGAGGTGTTGGAATT...CCACTCACCTTTTCCTCCTGAGCCTGCTCTCTGATCAGCTGGATCCCCACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
CDS-3UTR CAA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAATCAAGAAGCAGTTTCTaGGACTGGAAGGCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLESRSSF*DWKARA
Trigger: TGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGA...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCTCAAGAAGCAGTTTCTaGGACTGGAAGGCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: ETERLQGEISVCSDICMGSRSSF*DWKARA
Trigger: TGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGA...GCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TCCTGGAGACTTAAGAGGGCAGGACTTGGCCAGGAGGTCTTTGACTTGCTGGGAATAGTACACTCTTCATaGGGTAGTACCTACCATGCC +
Preference number: 5 (lower is better)
Translates to: SWRLKRAGLGQEVFDLLGIVHSS*GSTYHA
Trigger: GGCATGGTAGGTACTACCCAATGAAGAGTGTACTAT...TCCCAGCAAGTCAAAGACCTCCTGGCCAAGTCCTGCCCTCTTAAGTCTCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CCTCAGTCTTGTGACTCAGTTCTGCAGACCAAGCTGCTTTTCCAGCTCAGGGATCTAGATGATCAGCTTTaGAGGGCCTGGCACAACAGT +
Preference number: 5 (lower is better)
Translates to: PQSCDSVLQTKLLFQLRDLDDQL*RAWHNS
Trigger: ACTGTTGTGCCAGGCCCTCAAAAGCTGATCATCTAG...ATCCCTGAGCTGGAAAAGCAGCTTGGTCTGCAGAACTGAGTCACAAGACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp GGCCCAAAATCCCTTCTCCTGGGTACCGTCGTTTCTGGCTCCAGGCTCAGCCATGACGTTATGTGCCTCTaGATAGAACATAATACCACT +
Preference number: 5 (lower is better)
Translates to: GPKSLLLGTVVSGSRLSHDVMCL*IEHNTT
Trigger: AGTGGTATTATGTTCTATCAAGAGGCACATAACGTC...ATGGCTGAGCCTGGAGCCAGAAACGACGGTACCCAGGAGAAGGGATTTTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CAA 90 bp AGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTGTTCCTCGTGGTTTGTGTACATGGCTTaGCGTTTTTCGGTCCCACTC +
Preference number: 5 (lower is better)
Translates to: RSSFLDWKARASAVCSSWFVYMA*RFSVPL
Trigger: GAGTGGGACCGAAAAACGCAAAGCCATGTACACAAA...CCACGAGGAACAAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTGCTGGATTGATGTGGTaGGTAAATCCCAGCATTTTG +
Preference number: 5 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTAGLMW*VNPSIL
Trigger: CAAAATGCTGGGATTTACCAACCACATCAATCCAGC...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CTTTTGAGGGCCTGGCACAACAGTGCTCTGCATAGAGTGAGGACTGAAAGCACCGCTGGATTGATGTGGTaGGTAAATCCCAGCATTTTG +
Preference number: 5 (lower is better)
Translates to: LLRAWHNSALHRVRTESTAGLMW*VNPSIL
Trigger: CAAAATGCTGGGATTTACCAACCACATCAATCCAGC...GGTGCTTTCAGTCCTCACTCTATGCAGAGCACTGTTGTGCCAGGCCCTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAAGTCCATGGCTGGATaGATGTGGTTGGTAAATCCC +
Preference number: 5 (lower is better)
Translates to: SVCSDICMGQRDLVALKTKSMAG*MWLVNP
Trigger: GGGATTTACCAACCACATCAATCCAGCCATGGACTT...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGAAGGGGCATTCATGTTaGTCTTCCCGGCTACTGTTC +
Preference number: 5 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLKGHSC*SSRLLF
Trigger: GAACAGTAGCCGGGAAGACAAACATGAATGCCCCTT...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTATTTCACAGAGCATTTaGGTGAGCTCAATGGCACTG +
Preference number: 5 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTISQSI*VSSMAL
Trigger: CAGTGCCATTGAGCTCACCAAAATGCTCTGTGAAAT...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp TCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCTTGCTCTCGGACGACTaGCATAACCTTGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: SVCSDICMGQRDLVALKTLLSDD*HNLVEV
Trigger: GACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCAA...GGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCTCTAAAGACCAGACAAAGCTCGAGTGATTaGCTCTCGGACGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: VCSDICMGQRDLVALKTRQSSSD*LSDDLH
Trigger: ATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTTG...TCTGGTCTTTAGAGCCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGCAAAGCTCGAGTGATTaGCTCTCGGACGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: REKFPSALISVWAREIWWQSSSD*LSDDLH
Trigger: ATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTTG...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTTCAGGCGCTGCTGCTaGATCAGCTCAAGGATCTCG +
Preference number: 5 (lower is better)
Translates to: EVGLRNGWHLLATKITTDFRRCC*ISSRIS
Trigger: CGAGATCCTTGAGCTGATCAAGCAGCAGCGCCTGAA...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTGTACCAGAACCGTTCTaGCCTTCGGCGGTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSVPEPF*PSAVPN
Trigger: ATTGGGAACCGCCGAAGGCAAGAACGGTTCTGGTAC...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGTGGTCCGAGGTGGGTTaGAGAAATGGCTGGCATTTA +
Preference number: 5 (lower is better)
Translates to: REKFPSALISVWAREIWWWSEVG*RNGWHL
Trigger: TAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCAAGGGCATCTGCTGTTaGTTCCTCGTGGCCCAATCC +
Preference number: 5 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFKGICC*FLVAQS
Trigger: GGATTGGGCCACGAGGAACAAACAGCAGATGCCCTT...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGAGAAGCAGCAACGTCTaGGCACCATATGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLRSSNV*APYEAG
Trigger: TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCT...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCACAGAACTGGCCATGGTaGCTGAGTCTGGGTGATGTG +
Preference number: 5 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEAQNWPW*LSLGDV
Trigger: CACATCACCCAGACTCAGCAACCATGGCCAGTTCTG...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CAA 90 bp CTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGGCCAAAGGAAAGCAAACTTCTGTGCAAATGCATTaGCCATATCCTGTCGTTTGT +
Preference number: 5 (lower is better)
Translates to: LGREGQLPGVWKAKGKQTSVQMH*PYPVVC
Trigger: ACAAACGACAGGATATGGCAAATGCATTTGCACAGA...AGTTTGCTTTCCTTTGGCCTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CAA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGAAAATATGATGTCCCTTaGAGCCTGGTCATTGGGGTC +
Preference number: 5 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGKYDVP*SLVIGV
Trigger: GACCCCAATGACCAGGCTCAAAGGGACATCATATTT...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GAGACTGAGCGCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCGCTGGATTGATGTGGTaGGTAAATCCCAGCATTTTG +
Preference number: 5 (lower is better)
Translates to: ETERLQGEISVCSDICMGAGLMW*VNPSIL
Trigger: CAAAATGCTGGGATTTACCAACCACATCAATCCAGC...GCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGCGCTCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCCAGTCCACTCTTCTCTCCTAACCTTCCCAGTTCACAAAACTACAGCAGTACCAAGTCCATGGCTGGATaGATGTGGTTGGTAAATCCC +
Preference number: 5 (lower is better)
Translates to: ASPLFSPNLPSSQNYSSTKSMAG*MWLVNP
Trigger: GGGATTTACCAACCACATCAATCCAGCCATGGACTT...GGTACTGCTGTAGTTTTGTGAACTGGGAAGGTTAGGAGAGAAGAGTGGACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp GAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGACTTGCATAACCTTGTaGAAGTCCTCTGCTGTTGCC +
Preference number: 5 (lower is better)
Translates to: EMLEPTSEAATSWHHMKLTCITL*KSSAVA
Trigger: GGCAACAGCAGAGGACTTCAACAAGGTTATGCAAGT...CAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GCTTGCAGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCACTTGCATAACCTTGTaGAAGTCCTCTGCTGTTGCC +
Preference number: 5 (lower is better)
Translates to: ACREKFPSALISVWAREITCITL*KSSAVA
Trigger: GGCAACAGCAGAGGACTTCAACAAGGTTATGCAAGT...GATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCTGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp AATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGACGGATTGACAAACTaGTTCTCCATGTACCTCTTT +
Preference number: 5 (lower is better)
Translates to: NGRNHSTRKGRPTSWGLEDGLTN*FSMYLF
Trigger: AAAGAGGTACATGGAGAACAAGTTTGTCAATCCGTC...TTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290246.11
ENST00000372176.5
CDS-3UTR CAA 90 bp ACTGGCCACCAAAATCACTACAGATTCTGTACAAGCAAAAGACAAGGCACCAGAGCCATATCCTGTCGTTaGTCCTCAGGAGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: TGHQNHYRFCTSKRQGTRAISCR*SSGAFR
Trigger: TCTGAAGGCTCCTGAGGACAAACGACAGGATATGGC...TCTGGTGCCTTGTCTTTTGCTTGTACAGAATCTGTAGTGATTTTGGTGGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
CDS-3UTR CAA 90 bp TCCCAGTTCACAAAACTACAGCAGTACCTGCACAGTAAGCACTCAATAAACCACGCCATATCCTGTCGTTaGTCCTCAGGAGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: SQFTKLQQYLHSKHSINHAISCR*SSGAFR
Trigger: TCTGAAGGCTCCTGAGGACAAACGACAGGATATGGC...GTGGTTTATTGAGTGCTTACTGTGCAGGTACTGCTGTAGTTTTGTGAACTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTGCTGGATTGATGTGGTaGGTAAATCCCAGCATTTTG +
Preference number: 5 (lower is better)
Translates to: WSEVGLRNGWHLLATKITAGLMW*VNPSIL
Trigger: CAAAATGCTGGGATTTACCAACCACATCAATCCAGC...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATAAGGGGCATTCATGTTaGTCTTCCCGGCTACTGTTC +
Preference number: 5 (lower is better)
Translates to: EVGLRNGWHLLATKITTDKGHSC*SSRLLF
Trigger: GAACAGTAGCCGGGAAGACAAACATGAATGCCCCTT...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTCATTGCGTCCTTCATTaGGTAGTTCCCCAACCTGCA +
Preference number: 5 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSHCVLH*VVPQPA
Trigger: TGCAGGTTGGGGAACTACCAAATGAAGGACGCAATG...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp AGGGAGAAATTTCCGTCTGCTCTGATATCTGTATGGGCCAGAGAGATCTGGTGGACGACTTGCATAACCTaGTTGAAGTCCTCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: REKFPSALISVWAREIWWTTCIT*LKSSAV
Trigger: AACAGCAGAGGACTTCAACAAGGTTATGCAAGTCGT...CCACCAGATCTCTCTGGCCCATACAGATATCAGAGCAGACGGAAATTTCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CTGAAATCATGGCCAATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTTTGCTCTCGGACGACTaGCATAACCTTGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: LKSWPMAETIALGREGQLLLSDD*HNLVEV
Trigger: GACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCAA...AAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCATTGGCCATGATTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTCAAAGCTCGAGTGATTaGCTCTCGGACGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSQSSSD*LSDDLH
Trigger: ATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTTG...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTCCCTCAGCTCCACAATaGGCGGGGACTGGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: GKGEWLLLNPFQEAVSWTPSAPQ*AGTGSH
Trigger: ATGACTTCCAGTCCCCGCCAATTGTGGAGCTGAGGG...AGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCATATGAAGCTGGAATAGTACACTCTTCATaGGGTAGTACCTACCATGCC +
Preference number: 5 (lower is better)
Translates to: DVRANLRSSNVLAPYEAGIVHSS*GSTYHA
Trigger: GGCATGGTAGGTACTACCCAATGAAGAGTGTACTAT...TCCAGCTTCATATGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CACTCAATAAACCACAGTGAGTCTTCTAATGCTTATCCTCCTGACCTCTCTGGAGAGACACTGACCTTGTaGAAGTCCTCTGCTGTTGCC +
Preference number: 5 (lower is better)
Translates to: HSINHSESSNAYPPDLSGETLTL*KSSAVA
Trigger: GGCAACAGCAGAGGACTTCAACAAGGTCAGTGTCTC...TCCAGAGAGGTCAGGAGGATAAGCATTAGAAGACTCACTGTGGTTTATTGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp ATGGCAGAAACCATAGCACTAGGAAGGGAAGGCCAACTTCCTGGGGTCTGGAAGCAAAATTGGTCACTGTaGCATGATACCAAGGAACTA +
Preference number: 5 (lower is better)
Translates to: MAETIALGREGQLPGVWKQNWSL*HDTKEL
Trigger: TAGTTCCTTGGTATCATGCAACAGTGACCAATTTTG...CTTCCAGACCCCAGGAAGTTGGCCTTCCCTTCCTAGTGCTATGGTTTCTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS CCA 90 bp CAAAGCGATAAAGGAGAGAAACAAGTGGATGGGCAGAACTGGCCATaGTTGCTGAGTCTGGGTGATGTGTATACAGAGGTTCCATCTATT +
Preference number: 5 (lower is better)
Translates to: QSDKGEKQVDGQNWP*LLSLGDVYTEVPSI
Trigger: AATAGATGGAACCTCTGTATACACATCACCCAGACTCAGCAACCATGGCCAGTTCTGCCCATCCACTTGTTTCTCTCCTTTATCGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS CCA 90 bp TTTCTTCAAAGCGATAAAGGAGAGAAACAAGTGGATGGGCAGAACTaGCCATGGTTGCTGAGTCTGGGTGATGTGTATACAGAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: FLQSDKGEKQVDGQN*PWLLSLGDVYTEVP
Trigger: TGGAACCTCTGTATACACATCACCCAGACTCAGCAACCATGGCCAGTTCTGCCCATCCACTTGTTTCTCTCCTTTATCGCTTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS-3UTR CAA 90 bp TGGTCCGAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTGCATTTTGTAGTCCTTaGTGTACATGGCTTTGCGTT +
Preference number: 5 (lower is better)
Translates to: WSEVGLRNGWHLLATKITAFCSP*CTWLCV
Trigger: AACGCAAAGCCATGTACACAAAGGACTACAAAATGC...AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CACTCTTCTCTCCTAACCTTCCCAGTTCACAAAACTACAGCAGTACCTGCACAGATTTCACAGAGCATTTaGGTGAGCTCAATGGCACTG +
Preference number: 5 (lower is better)
Translates to: HSSLLTFPVHKTTAVPAQISQSI*VSSMAL
Trigger: CAGTGCCATTGAGCTCACCAAAATGCTCTGTGAAAT...CTGTGCAGGTACTGCTGTAGTTTTGTGAACTGGGAAGGTTAGGAGAGAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp CACTCAATAAACCACAGTGAGTCTTCTAATGCTTATCCTCCTGACCTCTCTGGACATTGCGTCCTTCATTaGGTAGTTCCCCAACCTGCA +
Preference number: 5 (lower is better)
Translates to: HSINHSESSNAYPPDLSGHCVLH*VVPQPA
Trigger: TGCAGGTTGGGGAACTACCAAATGAAGGACGCAATG...TCCAGAGAGGTCAGGAGGATAAGCATTAGAAGACTCACTGTGGTTTATTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAACTTGCATAACCTTGTaGAAGTCCTCTGCTGTTGCC +
Preference number: 5 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEATCITL*KSSAVA
Trigger: GGCAACAGCAGAGGACTTCAACAAGGTTATGCAAGT...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCACTTGCATAACCTTGTaGAAGTCCTCTGCTGTTGCC +
Preference number: 5 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFTCITL*KSSAVA
Trigger: GGCAACAGCAGAGGACTTCAACAAGGTTATGCAAGT...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp CTAAAGACCAGAGATGTTAGAGCCAACCTCAGAAGCAGCAACGTCTTGGCACCAAATTCCAACACCTCCTaGTTCTGTTTCAGAGCACTT +
Preference number: 5 (lower is better)
Translates to: LKTRDVRANLRSSNVLAPNSNTS*FCFRAL
Trigger: AAGTGCTCTGAAACAGAACAAGGAGGTGTTGGAATT...TGGTGCCAAGACGTTGCTGCTTCTGAGGTTGGCTCTAACATCTCTGGTCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
CDS-3UTR CAA 90 bp CAGCAGTACCTGCACAGTAAGCACTCAATAAACCACAGTGAGTCTTCTAATGCTAAATATGATGTCCCTTaGAGCCTGGTCATTGGGGTC +
Preference number: 5 (lower is better)
Translates to: QQYLHSKHSINHSESSNAKYDVP*SLVIGV
Trigger: GACCCCAATGACCAGGCTCAAAGGGACATCATATTT...AGCATTAGAAGACTCACTGTGGTTTATTGAGTGCTTACTGTGCAGGTACTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp CACTCTTCTCTCCTAACCTTCCCAGTTCACAAAACTACAGCAGTACCTGCACAGGCATTTTGTAGTCCTTaGTGTACATGGCTTTGCGTT +
Preference number: 5 (lower is better)
Translates to: HSSLLTFPVHKTTAVPAQAFCSP*CTWLCV
Trigger: AACGCAAAGCCATGTACACAAAGGACTACAAAATGC...CTGTGCAGGTACTGCTGTAGTTTTGTGAACTGGGAAGGTTAGGAGAGAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425546.5
CDS-3UTR CAA 90 bp CAAAAGACAAGGCACCAGAATGTAAGTGTTTCTCCTGGGCCCAAAATCCCTTCTATTTCACAGAGCATTTaGGTGAGCTCAATGGCACTG +
Preference number: 5 (lower is better)
Translates to: QKTRHQNVSVSPGPKIPSISQSI*VSSMAL
Trigger: CAGTGCCATTGAGCTCACCAAAATGCTCTGTGAAAT...AGAAGGGATTTTGGGCCCAGGAGAAACACTTACATTCTGGTGCCTTGTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCTGTATCAAGAAGCAGTTTCTaGGACTGGAAGGCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: GLRNGWHLLATKITTDSVSRSSF*DWKARA
Trigger: TGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGA...TACAGAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATATAGTACACTCTTCATaGGGTAGTACCTACCATGCC +
Preference number: 5 (lower is better)
Translates to: EVGLRNGWHLLATKITTDIVHSS*GSTYHA
Trigger: GGCATGGTAGGTACTACCCAATGAAGAGTGTACTAT...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATTCATAGTACACTCTTCATaGGGTAGTACCTACCATGCC +
Preference number: 5 (lower is better)
Translates to: GGFEKWLAFTGHQNHYRFIVHSS*GSTYHA
Trigger: GGCATGGTAGGTACTACCCAATGAAGAGTGTACTAT...GAATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000467800.5
CDS TCA 90 bp ATAAAGGAGAGAAACAAGTGGATGGGCAGAACTGGCCATGGTTGCTaGGTCTGGGTGATGTGTATACAGAGGTTCCATCTATTTTTGTGT +
Preference number: 5 (lower is better)
Translates to: IKERNKWMGRTGHGC*VWVMCIQRFHLFLC
Trigger: ACACAAAAATAGATGGAACCTCTGTATACACATCACCCAGACTCAGCAACCATGGCCAGTTCTGCCCATCCACTTGTTTCTCTCCTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS GCA 90 bp TACAGCATGTTCCAGGAACTCACATTCAGGATTATAGACCGGAGATaGTTCTGTGCAAATGCATTTGCCATATCCTGTCGTTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: YSMFQELTFRIIDRR*FCANAFAISCRLSS
Trigger: TGAGGACAAACGACAGGATATGGCAAATGCATTTGCACAGAAGCATCTCCGGTCTATAATCCTGAATGTGAGTTCCTGGAACATGCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480042.5
CDS-3UTR CAA 90 bp GCAGGCTCAGGAGGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGACGGATTGACAAACTaGTTCTCCATGTACCTCTTT +
Preference number: 5 (lower is better)
Translates to: AGSGGKGEWLLLNPFQEADGLTN*FSMYLF
Trigger: AAAGAGGTACATGGAGAACAAGTTTGTCAATCCGTC...TGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCCTCCTGAGCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290246.11
ENST00000372176.5
CDS-3UTR CAA 90 bp GAGGTGGGTTTGAGAAATGGCTGGCATTTACTGGCCACCAAAATCACTACAGATGCATTTTGTAGTCCTTaGTGTACATGGCTTTGCGTT +
Preference number: 5 (lower is better)
Translates to: EVGLRNGWHLLATKITTDAFCSP*CTWLCV
Trigger: AACGCAAAGCCATGTACACAAAGGACTACAAAATGC...ATCTGTAGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp GGAAAAGGTGAGTGGCTGTTGTTAAATCCATTTCAAGAAGCAGTTTCTTGGACTAAATATGATGTCCCTTaGAGCCTGGTCATTGGGGTC +
Preference number: 5 (lower is better)
Translates to: GKGEWLLLNPFQEAVSWTKYDVP*SLVIGV
Trigger: GACCCCAATGACCAGGCTCAAAGGGACATCATATTT...AGTCCAAGAAACTGCTTCTTGAAATGGATTTAACAACAGCCACTCACCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000467800.5
CDS-3UTR CAA 90 bp AATCCATTTCAAGAAGCAGTTTCTTGGACTGGAAGGCAAGGGCATCTGCTGTTTAATTCCAACACCTCCTaGTTCTGTTTCAGAGCACTT +
Preference number: 5 (lower is better)
Translates to: NPFQEAVSWTGRQGHLLFNSNTS*FCFRAL
Trigger: AAGTGCTCTGAAACAGAACAAGGAGGTGTTGGAATT...AAACAGCAGATGCCCTTGCCTTCCAGTCCAAGAAACTGCTTCTTGAAATGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
CDS CCA 90 bp TATACGATGTACACTAAATATTTACAGATGAAACAGTGTGATACTTaGGACTTTCTTCAAAGCGATAAAGGAGAGAAACAAGTGGATGGG +
Preference number: 5 (lower is better)
Translates to: YTMYTKYLQMKQCDT*DFLQSDKGEKQVDG
Trigger: CCCATCCACTTGTTTCTCTCCTTTATCGCTTTGAAGAAAGTCCCAAGTATCACACTGTTTCATCTGTAAATATTTAGTGTACATCGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS TCA 72 bp CTCAGCTCCACAATTGGCGGGGACTGGAAGTCATCCTaGCTCATCCTCTCAGACTGGCGCAGTCGTAGAATC +
Preference number: 6 (lower is better)
Translates to: LSSTIGGDWKSS*LILSDWRSRRI
Trigger: GATTCTACGACTGCGCCAGTCTGAGAGGATGAGTCAGGATGACTTCCAGTCCCCGCCAATTGTGGAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000290246.11
ENST00000352077.6
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000464448.1
ENST00000467800.5
CDS GCA 72 bp ATCCAAGTCACCATAGTGAAGGACCTTGTGGTTCAGTaGCAACCGGCAGTACCAGAACCGTTCTTGCCTTCG +
Preference number: 6 (lower is better)
Translates to: IQVTIVKDLVVQ*QPAVPEPFLPS
Trigger: CGAAGGCAAGAACGGTTCTGGTACTGCCGGTTGGCACTGAACCACAAGGTCCTTCACTATGGTGACTTGGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290246.11
ENST00000352077.6
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000464448.1
ENST00000467800.5
CDS CAA 72 bp ATGGCTTTGCGTTTTTCGGTCCCACTCCCAGGGGCATaGCTAGGATCAGACTCTGCGTCAAATGCAATCCTC +
Preference number: 6 (lower is better)
Translates to: MALRFSVPLPGA*LGSDSASNAIL
Trigger: GAGGATTGCATTTGACGCAGAGTCTGATCCTAGCAATGCCCCTGGGAGTGGGACCGAAAAACGCAAAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000290246.11
ENST00000352077.6
ENST00000372176.5
ENST00000396391.5
ENST00000425546.5
ENST00000462491.5
ENST00000467800.5
ENST00000481852.5
ENST00000488853.5
CDS CCA 72 bp GCACTCTCCAAGTATCACTGGGCCAGCTACTCAAACTaGCCTCTCTACTCACCTTGTTCTGTTTCAGAGCAC +
Preference number: 6 (lower is better)
Translates to: ALSKYHWASYSN*PLYSPCSVSEH
Trigger: GTGCTCTGAAACAGAACAAGGTGAGTAGAGAGGCCAGTTTGAGTAGCTGGCCCAGTGATACTTGGAGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS CAA 90 bp TTTGTGTACATGGCTTTGCGTTTTTCGGTCCCACTCCCAGGGGCATaGCTAGGATCAGACTCTGCGTCAAATGCAATCCTCCTCAGTTCA +
Preference number: 6 (lower is better)
Translates to: FVYMALRFSVPLPGA*LGSDSASNAILLSS
Trigger: TGAACTGAGGAGGATTGCATTTGACGCAGAGTCTGATCCTAGCAATGCCCCTGGGAGTGGGACCGAAAAACGCAAAGCCATGTACACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000290246.11
ENST00000352077.6
ENST00000372176.5
ENST00000396391.5
ENST00000425546.5
ENST00000462491.5
ENST00000467800.5
ENST00000481852.5
ENST00000488853.5
CDS CAA 90 bp GAACTGATCCAAAGAGTTGGGTTTGGAGGGCAAAGCTCGAGTGATTaGCTCTCGGACGACTTGCATAACCTTGTTGAAGTCCTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: ELIQRVGFGGQSSSD*LSDDLHNLVEVLCC
Trigger: ACAGCAGAGGACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTTGCCCTCCAAACCCAACTCTTTGGATCAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290246.11
ENST00000352077.6
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000464448.1
ENST00000467800.5
CDS TCA 72 bp AGAAACAAGTGGATGGGCAGAACTGGCCATGGTTGCTaGGTCTGGGTGATGTGTATACAGAGGTTCCATCTA +
Preference number: 6 (lower is better)
Translates to: RNKWMGRTGHGC*VWVMCIQRFHL
Trigger: TAGATGGAACCTCTGTATACACATCACCCAGACTCAGCAACCATGGCCAGTTCTGCCCATCCACTTGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS GCA 72 bp AAAGAGTTGGGTTTGGAGGGCAAAGCTCGAGTGATTTaGTCTCGGACGACTTGCATAACCTTGTTGAAGTCC +
Preference number: 6 (lower is better)
Translates to: KELGLEGKARVI*SRTTCITLLKS
Trigger: GGACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTTGCCCTCCAAACCCAACTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290246.11
ENST00000352077.6
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000464448.1
ENST00000467800.5
CDS CCA 72 bp AAAGGAGAGAAACAAGTGGATGGGCAGAACTGGCCATaGTTGCTGAGTCTGGGTGATGTGTATACAGAGGTT +
Preference number: 6 (lower is better)
Translates to: KGEKQVDGQNWP*LLSLGDVYTEV
Trigger: AACCTCTGTATACACATCACCCAGACTCAGCAACCATGGCCAGTTCTGCCCATCCACTTGTTTCTCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS CCA 72 bp AGCGATAAAGGAGAGAAACAAGTGGATGGGCAGAACTaGCCATGGTTGCTGAGTCTGGGTGATGTGTATACA +
Preference number: 6 (lower is better)
Translates to: SDKGEKQVDGQN*PWLLSLGDVYT
Trigger: TGTATACACATCACCCAGACTCAGCAACCATGGCCAGTTCTGCCCATCCACTTGTTTCTCTCCTTTATCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS CAA 72 bp CAAAGAGTTGGGTTTGGAGGGCAAAGCTCGAGTGATTaGCTCTCGGACGACTTGCATAACCTTGTTGAAGTC +
Preference number: 6 (lower is better)
Translates to: QRVGFGGQSSSD*LSDDLHNLVEV
Trigger: GACTTCAACAAGGTTATGCAAGTCGTCCGAGAGCAAATCACTCGAGCTTTGCCCTCCAAACCCAACTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290246.11
ENST00000352077.6
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000464448.1
ENST00000467800.5
CDS TCA 72 bp GGATGGGCAGAACTGGCCATGGTTGCTGAGTCTGGGTaGTGTGTATACAGAGGTTCCATCTATTTTTGTGTA +
Preference number: 6 (lower is better)
Translates to: GWAELAMVAESG*CVYRGSIYFCV
Trigger: TACACAAAAATAGATGGAACCTCTGTATACACATCACCCAGACTCAGCAACCATGGCCAGTTCTGCCCATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS TCA 72 bp ATGAATCCTGTCCCTCTTGGTTCTTTCTTGCCCAAATaGGGCTCTCCTCCATTTTCCACATGTACCACCACT +
Preference number: 6 (lower is better)
Translates to: MNPVPLGSFLPK*GSPPFSTCTTT
Trigger: AGTGGTGGTACATGTGGAAAATGGAGGAGAGCCTCATTTGGGCAAGAAAGAACCAAGAGGGACAGGATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481852.5
CDS CAA 90 bp AGCGATAAAGGAGAGAAACAAGTGGATGGGCAGAACTGGCCATGGTaGCTGAGTCTGGGTGATGTGTATACAGAGGTTCCATCTATTTTT +
Preference number: 6 (lower is better)
Translates to: SDKGEKQVDGQNWPW*LSLGDVYTEVPSIF
Trigger: AAAAATAGATGGAACCTCTGTATACACATCACCCAGACTCAGCAACCATGGCCAGTTCTGCCCATCCACTTGTTTCTCTCCTTTATCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467800.5
CDS TCA 72 bp GAATCTCAGAGTAACTCAGGCTACGCAATTTGCTCTTaGACTGATCCAAAGAGTTGGGTTTGGAGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: ESQSNSGYAICS*TDPKSWVWRAK
Trigger: CTTTGCCCTCCAAACCCAACTCTTTGGATCAGTTCAAGAGCAAATTGCGTAGCCTGAGTTACTCTGAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290246.11
ENST00000352077.6
ENST00000372176.5
ENST00000396391.5
ENST00000452857.5
ENST00000464448.1
ENST00000467800.5
CDS GCA 72 bp ATTCAGGATTATAGACCGGAGATGCTTCTGTGCAAATaGATTTGCCATATCCTGTCGTTTGTCCTCAGGAGC +
Preference number: 6 (lower is better)
Translates to: IQDYRPEMLLCK*ICHILSFVLRS
Trigger: GCTCCTGAGGACAAACGACAGGATATGGCAAATGCATTTGCACAGAAGCATCTCCGGTCTATAATCCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000290246.11
ENST00000352077.6
ENST00000372176.5
ENST00000396391.5
ENST00000425546.5
ENST00000450812.5
ENST00000462491.5
ENST00000480042.5
ENST00000488853.5
CDS TCA 72 bp TGCCTTACAGGTAAGGCAACTGAAGTTCAGACGGATTaGCAAACTTGTTCTCCATGTACCTCTTTCTACACC +
Preference number: 6 (lower is better)
Translates to: CLTGKATEVQTD*QTCSPCTSFYT
Trigger: GGTGTAGAAAGAGGTACATGGAGAACAAGTTTGTCAATCCGTCTGAACTTCAGTTGCCTTACCTGTAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290246.11
ENST00000372176.5
ENST00000487583.5
ENST00000488853.5
CDS GCA 72 bp CACATGATTCAGGATTATAGACCGGAGATGCTTCTGTaGAAATGCATTTGCCATATCCTGTCGTTTGTCCTC +
Preference number: 6 (lower is better)
Translates to: HMIQDYRPEMLL*KCICHILSFVL
Trigger: GAGGACAAACGACAGGATATGGCAAATGCATTTGCACAGAAGCATCTCCGGTCTATAATCCTGAATCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290246.11
ENST00000352077.6
ENST00000372176.5
ENST00000396391.5
ENST00000425546.5
ENST00000450812.5
ENST00000462491.5
ENST00000488853.5
CDS GCA 72 bp ACTCACATTCAGGATTATAGACCGGAGATGCTTCTGTaGAAATGCATTTGCCATATCCTGTCGTTTGTCCTC +
Preference number: 6 (lower is better)
Translates to: THIQDYRPEMLL*KCICHILSFVL
Trigger: GAGGACAAACGACAGGATATGGCAAATGCATTTGCACAGAAGCATCTCCGGTCTATAATCCTGAATGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480042.5
CDS GCA 72 bp TTCCAGGAACTCACATTCAGGATTATAGACCGGAGATaGTTCTGTGCAAATGCATTTGCCATATCCTGTCGT +
Preference number: 6 (lower is better)
Translates to: FQELTFRIIDRR*FCANAFAISCR
Trigger: ACGACAGGATATGGCAAATGCATTTGCACAGAAGCATCTCCGGTCTATAATCCTGAATGTGAGTTCCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480042.5
CDS TCA 72 bp ATTCTTACAGGTAAGGCAACTGAAGTTCAGACGGATTaGCAAACTTGTTCTCCATGTACCTCTTTCTACACC +
Preference number: 6 (lower is better)
Translates to: ILTGKATEVQTD*QTCSPCTSFYT
Trigger: GGTGTAGAAAGAGGTACATGGAGAACAAGTTTGTCAATCCGTCTGAACTTCAGTTGCCTTACCTGTAAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450812.5
ENST00000497412.5