RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELMO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000155849

Ensembl transcript IDs: ENST00000310758.9, ENST00000396040.6, ENST00000396045.7, ENST00000420636.5, ENST00000424212.1, ENST00000433246.5, ENST00000442504.5, ENST00000445322.1, ENST00000448602.5, ENST00000453399.5, ENST00000455119.5, ENST00000455879.5, ENST00000463390.1, ENST00000464262.6, ENST00000472359.1, ENST00000479447.1, ENST00000487336.1, ENST00000487843.1, ENST00000497024.1

Found 755 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACTGCCCTTGGTCTGGTGGGCAAGTTTTTGGGCAGTCTGGGGCTaGTGGCTTTCCTGCCCAAGGGAAGGAAGGGCATGCCTGCAGAGG +
Preference number: 1 (lower is better)
Translates to: ALPLVWWASFWAVWG*WLSCPREGRACLQR
Trigger: CCTCTGCAGGCATGCCCTTCCTTCCCTTGGGCAGGAAAGCCAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCAGACCAAGGGCAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CCA 90 bp CTGCCCTTGGTCTGGTGGGCAAGTTTTTGGGCAGTCTGGGGCTGCTaGCTTTCCTGCCCAAGGGAAGGAAGGGCATGCCTGCAGAGGGCT +
Preference number: 1 (lower is better)
Translates to: LPLVWWASFWAVWGC*LSCPREGRACLQRA
Trigger: AGCCCTCTGCAGGCATGCCCTTCCTTCCCTTGGGCAGGAAAGCCAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCAGACCAAGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CCA 90 bp CTTGGGGCACTGCCCTTGGTCTGGTGGGCAAGTTTTTGGGCAGTCTaGGGCTGCTGGCTTTCCTGCCCAAGGGAAGGAAGGGCATGCCTG +
Preference number: 1 (lower is better)
Translates to: LGALPLVWWASFWAV*GCWLSCPREGRACL
Trigger: CAGGCATGCCCTTCCTTCCCTTGGGCAGGAAAGCCAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCAGACCAAGGGCAGTGCCCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR TCA 90 bp GTGGGCTTTGCTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTaGCCTGAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGC +
Preference number: 1 (lower is better)
Translates to: VGFALVPPVDCSHGK*PEAVEPRNRIRAVS
Trigger: GCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR GCA 90 bp GTCTGGTGGGCAAGTTTTTGGGCAGTCTGGGGCTGCTGGCTTTCCTaGCCAAGGGAAGGAAGGGCATGCCTGCAGAGGGCTAGGATGGAA +
Preference number: 1 (lower is better)
Translates to: VWWASFWAVWGCWLS*PREGRACLQRARME
Trigger: TTCCATCCTAGCCCTCTGCAGGCATGCCCTTCCTTCCCTTGGGCAGGAAAGCCAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CCA 90 bp CTTTGGCCTTCTTACTGGCAGTGGGCTTTGCTCTTGTCCCACCAGTaGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGA +
Preference number: 1 (lower is better)
Translates to: LWPSYWQWALLLSHQ*TAAMGSDLKQWSRG
Trigger: TCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCAGTAAGAAGGCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR TCA 90 bp CACCATTTGTGCTTTCAGCTAAGAGGCTGGGAGCGTGGGTGGAAATaGAGAAGGCAGTTCTGGCCTGGGGCAGGGAGAGGAAACCCCAGA +
Preference number: 1 (lower is better)
Translates to: HHLCFQLRGWERGWK*RRQFWPGAGRGNPR
Trigger: TCTGGGGTTTCCTCTCCCTGCCCCAGGCCAGAACTGCCTTCTTCATTTCCACCCACGCTCCCAGCCTCTTAGCTGAAAGCACAAATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CCA 90 bp GATCACAGTGCAGACGCAAAGTGGGCATGGGACCTGTGGACTGTTTaGGAAATTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCT +
Preference number: 1 (lower is better)
Translates to: DHSADAKWAWDLWTV*EIYAREDHEEAAAA
Trigger: AGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAATTTCCCAAACAGTCCACAGGTCCCATGCCCACTTTGCGTCTGCACTGTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CCA 90 bp GAGGCCAGAGTGGCTGGTGCTGTGCCACGCTTAATACTGCATGCTTaGACCCTTCTGACATCCCTCCCAGTGCTGGGAGTTTACAATCCT +
Preference number: 1 (lower is better)
Translates to: EARVAGAVPRLILHA*TLLTSLPVLGVYNP
Trigger: AGGATTGTAAACTCCCAGCACTGGGAGGGATGTCAGAAGGGTCCAAGCATGCAGTATTAAGCGTGGCACAGCACCAGCCACTCTGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR CCA 90 bp CTACTGATTTCACCATTTGTGCTTTCAGCTAAGAGGCTGGGAGCGTaGGTGGAAATGAAGAAGGCAGTTCTGGCCTGGGGCAGGGAGAGG +
Preference number: 1 (lower is better)
Translates to: LLISPFVLSAKRLGA*VEMKKAVLAWGRER
Trigger: CCTCTCCCTGCCCCAGGCCAGAACTGCCTTCTTCATTTCCACCCACGCTCCCAGCCTCTTAGCTGAAAGCACAAATGGTGAAATCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CCA 90 bp ATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTaGGTGTGTTTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGT +
Preference number: 1 (lower is better)
Translates to: MWTHSFPLPKDGSKA*VCFHSSLLLARCSS
Trigger: ACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
3UTR CCA 90 bp GGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGCATaGGACCTGTGGACTGTTTGGGAAATTTATGCTAGGGAGGATCAC +
Preference number: 1 (lower is better)
Translates to: GGKICHDHSADAKWA*DLWTVWEIYAREDH
Trigger: GTGATCCTCCCTAGCATAAATTTCCCAAACAGTCCACAGGTCCCATGCCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR GCA 90 bp CAGTTTGCTCTTGAACTGGTCCAGGGAGCTAGGCTTGGTTGTAAGTaGTCTCATAACCTGCTCCTTCACCACCTGCATTACCTTGTTGAA +
Preference number: 1 (lower is better)
Translates to: QFALELVQGARLGCK*SHNLLLHHLHYLVE
Trigger: TTCAACAAGGTAATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
3UTR CCA 90 bp CTTCACGACAACATCAGTCTTCCTACTTTACTTCTGCCTTGGATTTaGCTGAGTTGCCCAGGCTTAGGAAACTGCAGGCAACAGGAGATG +
Preference number: 1 (lower is better)
Translates to: LHDNISLPTLLLPWI*LSCPGLGNCRQQEM
Trigger: CATCTCCTGTTGCCTGCAGTTTCCTAAGCCTGGGCAACTCAGCCAAATCCAAGGCAGAAGTAAAGTAGGAAGACTGATGTTGTCGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR CCA 90 bp CTTGGACTTCACGACAACATCAGTCTTCCTACTTTACTTCTGCCTTaGATTTGGCTGAGTTGCCCAGGCTTAGGAAACTGCAGGCAACAG +
Preference number: 1 (lower is better)
Translates to: LGLHDNISLPTLLLP*IWLSCPGLGNCRQQ
Trigger: CTGTTGCCTGCAGTTTCCTAAGCCTGGGCAACTCAGCCAAATCCAAGGCAGAAGTAAAGTAGGAAGACTGATGTTGTCGTGAAGTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR TCA 90 bp CTAGAGGCATTTAGGTTTAGTCTATTAGAGATGGAGCGAGACTACTaGTTTCACCATTTGTGCTTTCAGCTAAGAGGCTGGGAGCGTGGG +
Preference number: 1 (lower is better)
Translates to: LEAFRFSLLEMERDY*FHHLCFQLRGWERG
Trigger: CCCACGCTCCCAGCCTCTTAGCTGAAAGCACAAATGGTGAAATCAGTAGTCTCGCTCCATCTCTAATAGACTAAACCTAAATGCCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR TCA 90 bp GTCTTCTTAGAAGTAACATTCTCCACTGATGCTCAGAGCCTATGGTaGCCTAGCAATGGTGGAGGGTTTCCCACAGCAGTGTTTTTCAAA +
Preference number: 1 (lower is better)
Translates to: VFLEVTFSTDAQSLW*PSNGGGFPTAVFFK
Trigger: TTTGAAAAACACTGCTGTGGGAAACCCTCCACCATTGCTAGGTCACCATAGGCTCTGAGCATCAGTGGAGAATGTTACTTCTAAGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR TCA 90 bp GGTGGCCAAATATGGGCAACAATCCTTCCCCACATGGTCACAAAATaGATGGAAACAGATGGCATACTCTTCAGATCTCACAGGTCCAAA +
Preference number: 1 (lower is better)
Translates to: GGQIWATILPHMVTK*METDGILFRSHRSK
Trigger: TTTGGACCTGTGAGATCTGAAGAGTATGCCATCTGTTTCCATTCATTTTGTGACCATGTGGGGAAGGATTGTTGCCCATATTTGGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR CCA 90 bp GCCAAATATGGGCAACAATCCTTCCCCACATGGTCACAAAATGAATaGAAACAGATGGCATACTCTTCAGATCTCACAGGTCCAAAGGAG +
Preference number: 1 (lower is better)
Translates to: AKYGQQSFPTWSQNE*KQMAYSSDLTGPKE
Trigger: CTCCTTTGGACCTGTGAGATCTGAAGAGTATGCCATCTGTTTCCATTCATTTTGTGACCATGTGGGGAAGGATTGTTGCCCATATTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR CCA 90 bp ACAGATACATTTCTTAAACCCAGTGTCTCAGGACCTCAGAGATCCTaGTCCAGAAAGTTCCCTTTTTCATGGATTGGATCTTGTAACCCA +
Preference number: 1 (lower is better)
Translates to: TDTFLKPSVSGPQRS*SRKFPFSWIGSCNP
Trigger: TGGGTTACAAGATCCAATCCATGAAAAAGGGAACTTTCTGGACCAGGATCTCTGAGGTCCTGAGACACTGGGTTTAAGAAATGTATCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR TCA 90 bp TGTGCAAGTTATTCCATTTCACTGAAGCCAGAAGAGATTTTCATGTaGTCCTGTTTAAACCAGCTAAACATCTGGAAATGTGGAAACTAT +
Preference number: 1 (lower is better)
Translates to: CASYSISLKPEEIFM*SCLNQLNIWKCGNY
Trigger: ATAGTTTCCACATTTCCAGATGTTTAGCTGGTTTAAACAGGATCACATGAAAATCTCTTCTGGCTTCAGTGAAATGGAATAACTTGCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424212.1
3UTR-3UTR GCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGGGGGCCTTGGGGCACTaGCCTTGGTCTGGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRGALGH*PWSGGQ
Trigger: TTGCCCACCAGACCAAGGGCAGTGCCCCAAGGCCCC...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CAA 90 bp GGGAAGGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTaGGCCTTCTTACTGGCAGTGGGCTTTGCTCTTGTCCCACCAGTG +
Preference number: 2 (lower is better)
Translates to: GKEGHACRGLGWKGP*AFLLAVGFALVPPV
Trigger: CACTGGTGGGACAAGAGCAAAGCCCACTGCCAGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR GCA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGTGGGCAGTCTGGGGCTaGTGGCTTTCCTGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEWAVWG*WLSCPR
Trigger: CCTTGGGCAGGAAAGCCAGCAGCCCCAGACTGCCCA...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR GCA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCGGATCACGAGGAGGCTaGGGCTGCTGCTCTTGGGAC +
Preference number: 2 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSGSRGG*GCCSWD
Trigger: GTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCC...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CAA 90 bp GATGGAAGGGCCCTTTGGCCTTCTTACTGGCAGTGGGCTTTGCTCTaGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: DGRALWPSYWQWALL*SHQWTAAMGSDLKQ
Trigger: CTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCAGTAAGAAGGCCAAAGGGCCCTTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR GCA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAGGGAAGGAAGGGCATaGCTGCAGAGGGCTAGGATG +
Preference number: 2 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEREGRA*LQRARM
Trigger: CATCCTAGCCCTCTGCAGGCATGCCCTTCCTTCCCT...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR GCA 90 bp CTTCTGACATCCCTCCCAGTGCTGGGAGTTTACAATCCTGATAATGCCTCCAGTGGGGCCTTGGGGCACTaGCCTTGGTCTGGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: LLTSLPVLGVYNPDNASSGALGH*PWSGGQ
Trigger: TTGCCCACCAGACCAAGGGCAGTGCCCCAAGGCCCC...ACTGGAGGCATTATCAGGATTGTAAACTCCCAGCACTGGGAGGGATGTCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR-3UTR GCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTCGAGGAGGCTGCGGCTaGTGCTCTTGGGACCAAAGA +
Preference number: 2 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNARGGCG*CSWDQR
Trigger: TCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCG...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGCTGCCCTTGGTCTGGTaGGCAAGTTTTTGGGCAGTC +
Preference number: 2 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKLPLVW*ASFWAV
Trigger: GACTGCCCAAAAACTTGCCCACCAGACCAAGGGCAG...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR TCA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGCCCCAGACTAGCTGGTaGGGAGGGAAGATTTGTCAC +
Preference number: 2 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEPQTSW*GGKICH
Trigger: GTGACAAATCTTCCCTCCTCACCAGCTAGTCTGGGG...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CCA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTAGTGACCTGAAGCAGTaGAGCCGAGGAACAGAATCA +
Preference number: 2 (lower is better)
Translates to: GRACLQRARMEGPFGLLTSDLKQ*SRGTES
Trigger: TGATTCTGTTCCTCGGCTCCACTGCTTCAGGTCACT...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CCA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCCTGCCCTTGGTCTGGTaGGCAAGTTTTTGGGCAGTC +
Preference number: 2 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSLPLVW*ASFWAV
Trigger: GACTGCCCAAAAACTTGCCCACCAGACCAAGGGCAG...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CAA 90 bp AAATTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTaGGGACCAAAGAGGAACAGAGCAAGGCAAAAGCAGGGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: KFMLGRITRRLRLLL*GPKRNRARQKQGER
Trigger: CCTCTCTCCCTGCTTTTGCCTTGCTCTGTTCCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR TCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTCCCCAGACTAGCTGGTaGGGAGGGAAGATTTGTCAC +
Preference number: 2 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNAPQTSW*GGKICH
Trigger: GTGACAAATCTTCCCTCCTCACCAGCTAGTCTGGGG...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR GCA 90 bp GCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGCTGGAGAGGCCAGAGTGGCTGGTaGTGTGCCACGCTTAATACT +
Preference number: 2 (lower is better)
Translates to: AYSSDLTGPKEGLGRSWRGQSGW*CATLNT
Trigger: AGTATTAAGCGTGGCACAGCACCAGCCACTCTGGCC...TCTCCAGCTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR-3UTR CCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAAGACGGTTCCAAGGCGTaGGTGTGTTTTCATTCCTCT +
Preference number: 2 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTEDGSKA*VCFHSS
Trigger: AGAGGAATGAAAACACACCCACGCCTTGGAACCGTC...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
3UTR-3UTR CCA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGCCTTCTTACTGGCAGTaGGCTTTGCTCTTGTCCCAC +
Preference number: 2 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEPSYWQ*ALLLSH
Trigger: GTGGGACAAGAGCAAAGCCCACTGCCAGTAAGAAGG...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR GCA 90 bp CTTCTGACATCCCTCCCAGTGCTGGGAGTTTACAATCCTGATAATGCCTCCAGTAGGGAAGGAAGGGCATaGCTGCAGAGGGCTAGGATG +
Preference number: 2 (lower is better)
Translates to: LLTSLPVLGVYNPDNASSREGRA*LQRARM
Trigger: CATCCTAGCCCTCTGCAGGCATGCCCTTCCTTCCCT...ACTGGAGGCATTATCAGGATTGTAAACTCCCAGCACTGGGAGGGATGTCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR-3UTR GCA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGTTGTCACGATCACAGTaGAGACGCAAAGTGGGCATG +
Preference number: 2 (lower is better)
Translates to: SDSLTILWNLSCSRTSQELSRSQ*RRKVGM
Trigger: CATGCCCACTTTGCGTCTGCACTGTGATCGTGACAA...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CCA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCGACGGTTCCAAGGCGTaGGTGTGTTTTCATTCCTCT +
Preference number: 2 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSDGSKA*VCFHSS
Trigger: AGAGGAATGAAAACACACCCACGCCTTGGAACCGTC...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTCCTTCTTACTGGCAGTaGGCTTTGCTCTTGTCCCAC +
Preference number: 2 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNAPSYWQ*ALLLSH
Trigger: GTGGGACAAGAGCAAAGCCCACTGCCAGTAAGAAGG...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR GCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTTGTCACGATCACAGTaGAGACGCAAAGTGGGCATG +
Preference number: 2 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNALSRSQ*RRKVGM
Trigger: CATGCCCACTTTGCGTCTGCACTGTGATCGTGACAA...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTGACGGTTCCAAGGCGTaGGTGTGTTTTCATTCCTCT +
Preference number: 2 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNADGSKA*VCFHSS
Trigger: AGAGGAATGAAAACACACCCACGCCTTGGAACCGTC...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CCA 90 bp AGAGAGAAGGTGAGGTGGCCAAATATGGGCAACAATCCTTCCCCACATGGTCACCCTTCTTACTGGCAGTaGGCTTTGCTCTTGTCCCAC +
Preference number: 2 (lower is better)
Translates to: REKVRWPNMGNNPSPHGHPSYWQ*ALLLSH
Trigger: GTGGGACAAGAGCAAAGCCCACTGCCAGTAAGAAGG...GTGACCATGTGGGGAAGGATTGTTGCCCATATTTGGCCACCTCACCTTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR-3UTR CCA 90 bp GCGGGACTGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATGTGAAGAACATCGGGTaGAAGTCGTTGCAGGTCTCA +
Preference number: 2 (lower is better)
Translates to: AGLEIFLVHPLGLADFQDVKNIG*KSLQVS
Trigger: TGAGACCTGCAACGACTTCCACCCGATGTTCTTCAC...ATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
3UTR-3UTR TCA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCAGGTGGGAGGAGATTTaGGCGCAGATCTTAATTCAA +
Preference number: 2 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSRWEEI*AQILIQ
Trigger: TTGAATTAAGATCTGCGCTCAAATCTCCTCCCACCT...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CCA 90 bp AGAGAGAAGGTGAGGTGGCCAAATATGGGCAACAATCCTTCCCCACATGGTCACGACGGTTCCAAGGCGTaGGTGTGTTTTCATTCCTCT +
Preference number: 2 (lower is better)
Translates to: REKVRWPNMGNNPSPHGHDGSKA*VCFHSS
Trigger: AGAGGAATGAAAACACACCCACGCCTTGGAACCGTC...GTGACCATGTGGGGAAGGATTGTTGCCCATATTTGGCCACCTCACCTTCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR-3UTR CCA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCGGAGGATGTGGGGTTTaGTCTTCTCATCAAATAGCT +
Preference number: 2 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSGGCGV*SSHQIA
Trigger: AGCTATTTGATGAGAAGACCAAACCCCACATCCTCC...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR GCA 90 bp AGAGAGAAGGTGAGGTGGCCAAATATGGGCAACAATCCTTCCCCACATGGTCACCTGCAATGCATGCAGTaGTCTGGACCATATCATCTC +
Preference number: 2 (lower is better)
Translates to: REKVRWPNMGNNPSPHGHLQCMQ*SGPYHL
Trigger: GAGATGATATGGTCCAGAGCACTGCATGCATTGCAG...GTGACCATGTGGGGAAGGATTGTTGCCCATATTTGGCCACCTCACCTTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR CAA 90 bp CAACATCAGTCTTCCTACTTTACTTCTGCCTTGGATTTGGCTGAGTaGCCCAGGCTTAGGAAACTGCAGGCAACAGGAGATGAGTTGGAG +
Preference number: 2 (lower is better)
Translates to: QHQSSYFTSALDLAE*PRLRKLQATGDELE
Trigger: CTCCAACTCATCTCCTGTTGCCTGCAGTTTCCTAAGCCTGGGCAACTCAGCCAAATCCAAGGCAGAAGTAAAGTAGGAAGACTGATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR-3UTR CCA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGTTCAAGTGTAACTGGTaGTGCGAGATGATTCTAGAG +
Preference number: 2 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGFKCNW*CEMILE
Trigger: CTCTAGAATCATCTCGCACCACCAGTTACACTTGAA...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CAA 90 bp ACTTCACGACAACATCAGTCTTCCTACTTTACTTCTGCCTTGGATTaGGCTGAGTTGCCCAGGCTTAGGAAACTGCAGGCAACAGGAGAT +
Preference number: 2 (lower is better)
Translates to: TSRQHQSSYFTSALD*AELPRLRKLQATGD
Trigger: ATCTCCTGTTGCCTGCAGTTTCCTAAGCCTGGGCAACTCAGCCAAATCCAAGGCAGAAGTAAAGTAGGAAGACTGATGTTGTCGTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR CAA 90 bp ACTTGGACTTCACGACAACATCAGTCTTCCTACTTTACTTCTGCCTaGGATTTGGCTGAGTTGCCCAGGCTTAGGAAACTGCAGGCAACA +
Preference number: 2 (lower is better)
Translates to: TWTSRQHQSSYFTSA*DLAELPRLRKLQAT
Trigger: TGTTGCCTGCAGTTTCCTAAGCCTGGGCAACTCAGCCAAATCCAAGGCAGAAGTAAAGTAGGAAGACTGATGTTGTCGTGAAGTCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR-3UTR GCA 90 bp TGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCTCAGTGAGGCTTGGTTGTAAGTaGTCTCATAACCTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: WKSSWFILSDWRIFRISVRLGCK*SHNLLL
Trigger: AAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCT...CACTGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
3UTR-3UTR CCA 90 bp GCTCTTGAACTGGTCCAGGGAGCTAGGCTTGGTTGTAAGTGCTCTCATAACCTGGTCTTGTTCAGGAGCTaGATACAGATGCAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: ALELVQGARLGCKCSHNLVLFRS*IQMQKN
Trigger: GTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGAC...CAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACCAGTTCAAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420636.5
3UTR-3UTR GCA 90 bp GCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGCTGGAGATCAGGTCTGTGGGTATaGATTCTTTTCATTGCTAAA +
Preference number: 2 (lower is better)
Translates to: AYSSDLTGPKEGLGRSWRSGLWV*ILFIAK
Trigger: TTTAGCAATGAAAAGAATGCATACCCACAGACCTGA...TCTCCAGCTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR-3UTR CCA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGGATGGAAGGGCCCTTTaGCCTTCTTACTGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: PFYSTACLRECYFQEDVWDGRAL*PSYWQW
Trigger: CCACTGCCAGTAAGAAGGCCAAAGGGCCCTTCCATC...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000396045.7
3UTR-3UTR GCA 90 bp GACTTAAGAAACATCCTTCGCTGGGCTCTGACCTATAATTTATTAACCCACGGTAAGTGTAACTGGTGGTaGGAGATGATTCTAGAGAGA +
Preference number: 2 (lower is better)
Translates to: DLRNILRWALTYNLLTHGKCNWW*EMILER
Trigger: TCTCTCTAGAATCATCTCGCACCACCAGTTACACTT...ACCGTGGGTTAATAAATTATAGGTCAGAGCCCAGCGAAGGATGTTTCTTAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR-3UTR CCA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGGTAACACCAAACGCTTaGATAGCAACAGTCCGTCCT +
Preference number: 2 (lower is better)
Translates to: PFYSTACLRECYFQEDVWVTPNA*IATVRP
Trigger: AGGACGGACTGTTGCTATCCAAGCGTTTGGTGTTAC...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000396045.7
3UTR-3UTR CCA 90 bp TTATTCCATTTCACTGAAGCCAGAAGAGATTTTCATGTGATCCTGTTTAAACCAAAACATCTGGAAATGTaGAAACTATTCCGTAAAGCG +
Preference number: 2 (lower is better)
Translates to: LFHFTEARRDFHVILFKPKHLEM*KLFRKA
Trigger: CGCTTTACGGAATAGTTTCCACATTTCCAGATGTTT...TGGTTTAAACAGGATCACATGAAAATCTCTTCTGGCTTCAGTGAAATGGAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424212.1
3UTR CCA 72 bp GTCTGGTGGGCAAGTTTTTGGGCAGTCTGGGGCTGCTaGCTTTCCTGCCCAAGGGAAGGAAGGGCATGCCTG +
Preference number: 3 (lower is better)
Translates to: VWWASFWAVWGC*LSCPREGRACL
Trigger: CAGGCATGCCCTTCCTTCCCTTGGGCAGGAAAGCCAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CCA 72 bp CTGCCCTTGGTCTGGTGGGCAAGTTTTTGGGCAGTCTaGGGCTGCTGGCTTTCCTGCCCAAGGGAAGGAAGG +
Preference number: 3 (lower is better)
Translates to: LPLVWWASFWAV*GCWLSCPREGR
Trigger: CCTTCCTTCCCTTGGGCAGGAAAGCCAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCAGACCAAGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CAA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTCAGTGGGCTTTGCTCTaGTCCCACCAGTGGACTGCA +
Preference number: 3 (lower is better)
Translates to: GRACLQRARMEGPFGLLTQWALL*SHQWTA
Trigger: TGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTG...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR TCA 72 bp CTGAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTaGGCAAGATGCCAGCTAGGGGCTGAAAGTTGCCAG +
Preference number: 3 (lower is better)
Translates to: LKQWSRGTESGR*ARCQLGAESCQ
Trigger: CTGGCAACTTTCAGCCCCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
3UTR TCA 72 bp GCTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTaGCCTGAAGCAGTGGAGCCGAGGAACAGAATCAGG +
Preference number: 3 (lower is better)
Translates to: ALVPPVDCSHGK*PEAVEPRNRIR
Trigger: CCTGATTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
3UTR TCA 72 bp TGCTTTCAGCTAAGAGGCTGGGAGCGTGGGTGGAAATaGAGAAGGCAGTTCTGGCCTGGGGCAGGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: CFQLRGWERGWK*RRQFWPGAGRG
Trigger: TCCTCTCCCTGCCCCAGGCCAGAACTGCCTTCTTCATTTCCACCCACGCTCCCAGCCTCTTAGCTGAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CAA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCTACTGGCAGTGGGCTTaGCTCTTGTCCCACCAGTGG +
Preference number: 3 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSYWQWA*LLSHQW
Trigger: CCACTGGTGGGACAAGAGCAAAGCCCACTGCCAGTA...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CAA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCCTAGGTGTTCCAGTTTaGGAAGGGGCATGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSLGVPV*EGACLG
Trigger: GCCCAGACATGCCCCTTCCAAAACTGGAACACCTAG...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CAA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGCTTGGGGCACTGCCCTaGGTCTGGTGGGCAAGTTTT +
Preference number: 3 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGLGALP*VWWASF
Trigger: AAAACTTGCCCACCAGACCAAGGGCAGTGCCCCAAG...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CAA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGCTGCGGCTGCTGCTCTaGGGACCAAAGAGGAACAGA +
Preference number: 3 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGLRLLL*GPKRNR
Trigger: TCTGTTCCTCTTTGGTCCCAAGAGCAGCAGCCGCAG...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CAA 90 bp GCGGGACTGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATATCGGGTGGAAGTCGTaGCAGGTCTCACTAGCTCCG +
Preference number: 3 (lower is better)
Translates to: AGLEIFLVHPLGLADFQDIGWKS*QVSLAP
Trigger: CGGAGCTAGTGAGACCTGCAACGACTTCCACCCGAT...ATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
3UTR CCA 72 bp TCACCATTTGTGCTTTCAGCTAAGAGGCTGGGAGCGTaGGTGGAAATGAAGAAGGCAGTTCTGGCCTGGGGC +
Preference number: 3 (lower is better)
Translates to: SPFVLSAKRLGA*VEMKKAVLAWG
Trigger: GCCCCAGGCCAGAACTGCCTTCTTCATTTCCACCCACGCTCCCAGCCTCTTAGCTGAAAGCACAAATGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CAA 90 bp CTTCTGACATCCCTCCCAGTGCTGGGAGTTTACAATCCTGATAATGCCTCCAGTCTGGTGGGCAAGTTTTaGGGCAGTCTGGGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: LLTSLPVLGVYNPDNASSLVGKF*GSLGLL
Trigger: CAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCAG...ACTGGAGGCATTATCAGGATTGTAAACTCCCAGCACTGGGAGGGATGTCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR-3UTR CAA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGGGTAACACCAAACGCTaGGATAGCAACAGTCCGTCC +
Preference number: 3 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEGNTKR*DSNSPS
Trigger: GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACC...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CAA 90 bp CGGGCGGGACTGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGTCCAGGGAGCTAGGCTaGGTTGTAAGTGCTCTCATA +
Preference number: 3 (lower is better)
Translates to: RAGLEIFLVHPLGLADFQSRELG*VVSALI
Trigger: TATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGA...CTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
3UTR CCA 72 bp GCAGACGCAAAGTGGGCATGGGACCTGTGGACTGTTTaGGAAATTTATGCTAGGGAGGATCACGAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: ADAKWAWDLWTV*EIYAREDHEEA
Trigger: AGCCTCCTCGTGATCCTCCCTAGCATAAATTTCCCAAACAGTCCACAGGTCCCATGCCCACTTTGCGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR-3UTR CAA 90 bp ACAGATGGCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGCTAGGTGTTCCAGTTTaGGAAGGGGCATGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: TDGILFRSHRSKGGSREELGVPV*EGACLG
Trigger: GCCCAGACATGCCCCTTCCAAAACTGGAACACCTAG...CTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGCCATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR-3UTR CAA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATCTAGGTGTTCCAGTTTaGGAAGGGGCATGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHLGVPV*EGACLG
Trigger: GCCCAGACATGCCCCTTCCAAAACTGGAACACCTAG...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
3UTR-3UTR CAA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCTAGGTGTTCCAGTTTaGGAAGGGGCATGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSLGVPV*EGACLG
Trigger: GCCCAGACATGCCCCTTCCAAAACTGGAACACCTAG...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
3UTR-3UTR CAA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTAGGAGGATGTGGGGTTaGGTCTTCTCATCAAATAGC +
Preference number: 3 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNARRMWG*VFSSNS
Trigger: GCTATTTGATGAGAAGACCAAACCCCACATCCTCCT...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR TCA 72 bp GAAGTAACATTCTCCACTGATGCTCAGAGCCTATGGTaGCCTAGCAATGGTGGAGGGTTTCCCACAGCAGTG +
Preference number: 3 (lower is better)
Translates to: EVTFSTDAQSLW*PSNGGGFPTAV
Trigger: CACTGCTGTGGGAAACCCTCCACCATTGCTAGGTCACCATAGGCTCTGAGCATCAGTGGAGAATGTTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR GCA 72 bp ATGTCTGACAGCTTGACCATCCTGTGGAACTTGAGTTaGAGCAGGACCTCCCAGGAGAAGGTAACACCAAAC +
Preference number: 3 (lower is better)
Translates to: MSDSLTILWNLS*SRTSQEKVTPN
Trigger: GTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CCA 72 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTaGGTGTGTTTTCATTCCTCTCTCCTGTTAGCTAGG +
Preference number: 3 (lower is better)
Translates to: HSFPLPKDGSKA*VCFHSSLLLAR
Trigger: CCTAGCTAACAGGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
3UTR-3UTR CAA 90 bp CTTCTGACATCCCTCCCAGTGCTGGGAGTTTACAATCCTGATAATGCCTCCAGTGAGGTGGGAGGAGATTaGAGCGCAGATCTTAATTCA +
Preference number: 3 (lower is better)
Translates to: LLTSLPVLGVYNPDNASSEVGGD*SADLNS
Trigger: TGAATTAAGATCTGCGCTCAAATCTCCTCCCACCTC...ACTGGAGGCATTATCAGGATTGTAAACTCCCAGCACTGGGAGGGATGTCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR-3UTR CAA 90 bp CGGGACTGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCACCACCTGCATTACCTaGTTGAAGTCTTCAGAAGTT +
Preference number: 3 (lower is better)
Translates to: RDWKSSWFILSDWRIFRITTCIT*LKSSEV
Trigger: AACTTCTGAAGACTTCAACAAGGTAATGCAGGTGGT...GATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
3UTR GCA 72 bp AGGGAGCTAGGCTTGGTTGTAAGTGCTCTCATAACCTaGTCCTTCACCACCTGCATTACCTTGTTGAAGTCT +
Preference number: 3 (lower is better)
Translates to: RELGLVVSALIT*SFTTCITLLKS
Trigger: AGACTTCAACAAGGTAATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
3UTR CCA 72 bp CACGACAACATCAGTCTTCCTACTTTACTTCTGCCTTaGATTTGGCTGAGTTGCCCAGGCTTAGGAAACTGC +
Preference number: 3 (lower is better)
Translates to: HDNISLPTLLLP*IWLSCPGLGNC
Trigger: GCAGTTTCCTAAGCCTGGGCAACTCAGCCAAATCCAAGGCAGAAGTAAAGTAGGAAGACTGATGTTGTCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR GCA 72 bp AAAGGTTTCTTTCTATTAAATGCACCAAAGCTGGAGTaGCAGAAGAGAGAGGGGCTGGATCTCCCCAACCAA +
Preference number: 3 (lower is better)
Translates to: KGFFLLNAPKLE*QKREGLDLPNQ
Trigger: TTGGTTGGGGAGATCCAGCCCCTCTCTCTTCTGGCACTCCAGCTTTGGTGCATTTAATAGAAAGAAACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR CCA 72 bp GTGATCCTGTTTAAACCAGCTAAACATCTGGAAATGTaGAAACTATTCCGTAAAGCGCAAGAGGACCACACG +
Preference number: 3 (lower is better)
Translates to: VILFKPAKHLEM*KLFRKAQEDHT
Trigger: CGTGTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACATTTCCAGATGTTTAGCTGGTTTAAACAGGATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424212.1
3UTR TCA 72 bp ATATGGGCAACAATCCTTCCCCACATGGTCACAAAATaGATGGAAACAGATGGCATACTCTTCAGATCTCAC +
Preference number: 3 (lower is better)
Translates to: IWATILPHMVTK*METDGILFRSH
Trigger: GTGAGATCTGAAGAGTATGCCATCTGTTTCCATTCATTTTGTGACCATGTGGGGAAGGATTGTTGCCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR TCA 72 bp TTTAGGTTTAGTCTATTAGAGATGGAGCGAGACTACTaGTTTCACCATTTGTGCTTTCAGCTAAGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: FRFSLLEMERDY*FHHLCFQLRGW
Trigger: CCAGCCTCTTAGCTGAAAGCACAAATGGTGAAATCAGTAGTCTCGCTCCATCTCTAATAGACTAAACCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR TCA 72 bp TATTCCATTTCACTGAAGCCAGAAGAGATTTTCATGTaGTCCTGTTTAAACCAGCTAAACATCTGGAAATGT +
Preference number: 3 (lower is better)
Translates to: YSISLKPEEIFM*SCLNQLNIWKC
Trigger: ACATTTCCAGATGTTTAGCTGGTTTAAACAGGATCACATGAAAATCTCTTCTGGCTTCAGTGAAATGGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR CCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGGGGGCCGCGGCGGCGTaGGTGGCTCTGCCTCTATCC +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRGAAAA*VALPLS
Trigger: GGATAGAGGCAGAGCCACCCACGCCGCCGCGGCCCC...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGGCTGGAGCCCAGGGATaGTCCGATTGGCAGGAGTCG +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRAGAQG*SDWQES
Trigger: CGACTCCTGCCAATCGGAGCATCCCTGGGCTCCAGC...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS-3UTR CCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGTCCAGACAGGGGCCTTaGGGCACTGCCCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRSRQGP*GTALGL
Trigger: CAGACCAAGGGCAGTGCCCCAAGGCCCCTGTCTGGA...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGGCGCCATCTCATTGTTaGTGGCCCGCTGGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARAPSHC*WPAGLG
Trigger: TCCGAGCCCAGCGGGCCATCAACAATGAGATGGCGC...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTCCACAGCTTGTGCTGTaGGGCCAGAGTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GRACLQRARMEGPFGLLTPQLVL*GQSGWC
Trigger: GCACCAGCCACTCTGGCCTCACAGCACAAGCTGTGG...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACGGATCACGAGGAGGCTaGGGCTGCTGCTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHGSRGG*GCCSWD
Trigger: GTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCC...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTGCTGTGAGGCCAGAGTaGCTGGTGCTGTGCCACGCT +
Preference number: 4 (lower is better)
Translates to: GRACLQRARMEGPFGLLTAVRPE*LVLCHA
Trigger: AGCGTGGCACAGCACCAGCCACTCTGGCCTCACAGC...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGATTCTATGGCCACCTTaGCGATGTCCGCGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARILWPP*RCPRVA
Trigger: CGCCACCCGCGGACATCGTCAAGGTGGCCATAGAAT...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTACTCCTGGGCAAACGTaGCATCCCGGGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGTPGQT*HPGRGW
Trigger: CCAGCCTCTCCCGGGATGTCACGTTTGCCCAGGAGT...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp ATCGGGTGGAAGTCGTTGCAGGTCTCACTAGCTCCGAGACACACTGCAAGGCTGGCGCCATCTCATTGTTaGTGGCCCGCTGGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: IGWKSLQVSLAPRHTARLAPSHC*WPAGLG
Trigger: TCCGAGCCCAGCGGGCCATCAACAATGAGATGGCGC...CAGCCTTGCAGTGTGTCTCGGAGCTAGTGAGACCTGCAACGACTTCCACCCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR TCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCGCGCCATCTCATTGTTaGTGGCCCGCTGGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGAPSHC*WPAGLG
Trigger: TCCGAGCCCAGCGGGCCATCAACAATGAGATGGCGC...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGCCGTCACCACGGCTTTaGTATCTGCCACCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRPSPRL*YLPPAV
Trigger: AACTGCCGGTGGCAGATATCAAAGCCGTGGTGACGG...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGATGCCAGCTAGGGGCTaGAAGTTGCCAGGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRMPARG*KLPGLE
Trigger: CTCTAGCCCTGGCAACTTTCAGCCCCTAGCTGGCAT...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGTGCAGCCATGGGAAGTaGCCTGAAGCAGTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARCSHGK*PEAVEP
Trigger: CGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCA...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAACGGCGTGGGTGGCTCTaGCTCTATCCTGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTERRGWL*LYPVPI
Trigger: GATGGGCACAGGATAGAGGCAGAGCCACCCACGCCG...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAGGCTGCGGCTaGTGCTCTTGGGACCAAAGA +
Preference number: 4 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSRGGCG*CSWDQR
Trigger: TCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCG...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGGTGTCTATACCTGCTTaGGGTCGCAGGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRVSIPA*GRRTAA
Trigger: CGCTGCTGTCCTGCGACCCCAAGCAGGTATAGACAC...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGGACGATGTCCGCGGGTaGCGGCATTGTAAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARDDVRG*RHCKSP
Trigger: TGGGGACTTACAATGCCGCCACCCGCGGACATCGTC...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCAGTTGCTGGGCTCCTTaGGAATCGGCGGAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSSCWAP*ESAEVR
Trigger: ACGCACCTCCGCCGATTCCCAAGGAGCCCAGCAACT...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCTCCAGACAGGGGCCTTaGGGCACTGCCCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGSRQGP*GTALGL
Trigger: CAGACCAAGGGCAGTGCCCCAAGGCCCCTGTCTGGA...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CAA 72 bp GGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTaGGCCTTCTTACTGGCAGTGGGCTTTGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: GHACRGLGWKGP*AFLLAVGFALV
Trigger: GACAAGAGCAAAGCCCACTGCCAGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGGCGACCCGCCACCATTaGAGGGGAACTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEATRHH*RGTGGS
Trigger: AGAGCCTCCAGTTCCCCTTCAATGGTGGCGGGTCGC...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACATGCCAGCTAGGGGCTaGAAGTTGCCAGGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHMPARG*KLPGLE
Trigger: CTCTAGCCCTGGCAACTTTCAGCCCCTAGCTGGCAT...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp TGGCAGTGGGCTTTGCTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACACAGAATCAGGGCGGTaGGCAAGATGCCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: WQWALLLSHQWTAAMGSDTESGR*ARCQLG
Trigger: CCCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGT...GTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCGCTCAGAGCCTATGGTaGCCTAGCAATGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSAQSLW*PSNGGG
Trigger: CCCTCCACCATTGCTAGGTCACCATAGGCTCTGAGC...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACCCGCTCTCCACCATCTaGGTGAGGAGAGAGATACCG +
Preference number: 4 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHPLSTI*VRREIP
Trigger: CGGTATCTCTCTCCTCACGCAGATGGTGGAGAGCGG...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGACCGGCAGTTTGTCCTaGAAGGAATCGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRTGSLS*KESWGT
Trigger: AGTGCCCCACGATTCCTTGCAGGACAAACTGCCGGT...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp TGGCAGTGGGCTTTGCTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACAGGGAAGGAAGGGCATaGCTGCAGAGGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: WQWALLLSHQWTAAMGSDREGRA*LQRARM
Trigger: CATCCTAGCCCTCTGCAGGCATGCCCTTCCTTCCCT...GTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTGGGGCCTTGGGGCACTaGCCTTGGTCTGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNAGALGH*PWSGGQ
Trigger: TTGCCCACCAGACCAAGGGCAGTGCCCCAAGGCCCC...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGGGAGGCTGCGGCTGCTaGTCTTGGGACCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKGGCGC*SWDQRG
Trigger: TCCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCC...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCGAGGAGGCTGCGGCTaGTGCTCTTGGGACCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGRGGCG*CSWDQR
Trigger: TCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCG...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTCGAGGAGGCTGCGGCTaGTGCTCTTGGGACCAAAGA +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGRGGCG*CSWDQR
Trigger: TCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCG...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGGGATCACGAGGAGGCTaGGGCTGCTGCTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEGSRGG*GCCSWD
Trigger: GTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCC...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGCTGTGGAACTTGAGTTaGAGCAGGACCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRLWNLS*SRTSQE
Trigger: CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACGCACCAAAGCTGGAGTaGCAGAAGAGAGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHAPKLE*QKREGL
Trigger: CAGCCCCTCTCTCTTCTGGCACTCCAGCTTTGGTGC...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCCCGCGGCGGCGTGGGTaGCTCTGCCTCTATCCTGTG +
Preference number: 4 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSPRRRG*LCLYPV
Trigger: CACAGGATAGAGGCAGAGCCACCCACGCCGCCGCGG...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGGCACTGCCCTTGGTCTaGTGGGCAAGTTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRALPLV*WASFWA
Trigger: TGCCCAAAAACTTGCCCACCAGACCAAGGGCAGTGC...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGAGAAGAGAGAGGGGCTaGATCTCCCCAACCAAGGTC +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRRRERG*ISPTKV
Trigger: GACCTTGGTTGGGGAGATCCAGCCCCTCTCTCTTCT...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp TGGCAGTGGGCTTTGCTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACTCTCCACCATCTGCGTaGGGAGAGAGATACCGTCCA +
Preference number: 4 (lower is better)
Translates to: WQWALLLSHQWTAAMGSDSPPSA*GERYRP
Trigger: TGGACGGTATCTCTCTCCTCACGCAGATGGTGGAGA...GTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTCCGTCACCACGGCTTTaGTATCTGCCACCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGPSPRL*YLPPAV
Trigger: AACTGCCGGTGGCAGATATCAAAGCCGTGGTGACGG...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGTGCAGCCATGGGAAGTaGCCTGAAGCAGTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: SDSLTILWNLSCSRTSQECSHGK*PEAVEP
Trigger: CGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCA...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp TGGCAGTGGGCTTTGCTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCCCCAGACTAGCTGGTaGGGAGGGAAGATTTGTCAC +
Preference number: 4 (lower is better)
Translates to: WQWALLLSHQWTAAMGSDPQTSW*GGKICH
Trigger: GTGACAAATCTTCCCTCCTCACCAGCTAGTCTGGGG...GTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGATGCTTGGACCCTTCTaGCATCCCTCCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKMLGPF*HPSQCW
Trigger: CCAGCACTGGGAGGGATGTCAGAAGGGTCCAAGCAT...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTCCGCTCTCCACCATCTaGGTGAGGAGAGAGATACCG +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGPLSTI*VRREIP
Trigger: CGGTATCTCTCTCCTCACGCAGATGGTGGAGAGCGG...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCACCGGCAGTTTGTCCTaGAAGGAATCGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSTGSLS*KESWGT
Trigger: AGTGCCCCACGATTCCTTGCAGGACAAACTGCCGGT...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTACCGGCAGTTTGTCCTaGAAGGAATCGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: GRACLQRARMEGPFGLLTTGSLS*KESWGT
Trigger: AGTGCCCCACGATTCCTTGCAGGACAAACTGCCGGT...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGACCGGCAGTTTGTCCTaGAAGGAATCGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARTGSLS*KESWGT
Trigger: AGTGCCCCACGATTCCTTGCAGGACAAACTGCCGGT...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTAGGGAAGGAAGGGCATaGCTGCAGAGGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGREGRA*LQRARM
Trigger: CATCCTAGCCCTCTGCAGGCATGCCCTTCCTTCCCT...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGTGGGCAGTCTGGGGCTaGTGGCTTTCCTGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGWAVWG*WLSCPR
Trigger: CCTTGGGCAGGAAAGCCAGCAGCCCCAGACTGCCCA...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACCCATCGACTCCAAAATaGCCAAGGACCGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHPSTPK*PRTAAG
Trigger: TCCTGCAGCGGTCCTTGGCCATTTTGGAGTCGATGG...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACCTCTTGTCCCACCAGTaGACTGCAGCCATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHLLSHQ*TAAMGS
Trigger: ACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGCTCTTGTCCCACCAGTaGACTGCAGCCATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARLLSHQ*TAAMGS
Trigger: ACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGTTGGGGCACTGCCCTTaGTCTGGTGGGCAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRLGHCP*SGGQVF
Trigger: AAAAACTTGCCCACCAGACCAAGGGCAGTGCCCCAA...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCGACGCAAAGTGGGCATaGGACCTGTGGACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSDAKWA*DLWTVW
Trigger: CCAAACAGTCCACAGGTCCCATGCCCACTTTGCGTC...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTAGTGCAGACGCAAAGTaGGCATGGGACCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: GRACLQRARMEGPFGLLTSADAK*AWDLWT
Trigger: AGTCCACAGGTCCCATGCCCACTTTGCGTCTGCACT...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACAGTGCAGACGCAAAGTaGGCATGGGACCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHSADAK*AWDLWT
Trigger: AGTCCACAGGTCCCATGCCCACTTTGCGTCTGCACT...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CTGGAAATGTGGAAACTATTCCGTAAAGCGCAAGAGGACCACACGCTCGGAAGACAGGCCCGGGGAGGCTaGAGGGAGAGCGCATACTGG +
Preference number: 4 (lower is better)
Translates to: LEMWKLFRKAQEDHTLGRQARGG*RESAYW
Trigger: CCAGTATGCGCTCTCCCTCCAGCCTCCCCGGGCCTG...TCTTCCGAGCGTGTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACATTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR TCA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCTCTGATCAATTTCCATaGGTTTGGGGTAGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSSDQFP*VWGRRP
Trigger: CGGGCGCCTACCCCAAACTCATGGAAATTGATCAGA...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp AGAGAGAAGGTGAGGTGGCCAAATATGGGCAACAATCCTTCCCCACATGGTCACACTCCTGGGCAAACGTaGCATCCCGGGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: REKVRWPNMGNNPSPHGHTPGQT*HPGRGW
Trigger: CCAGCCTCTCCCGGGATGTCACGTTTGCCCAGGAGT...GTGACCATGTGGGGAAGGATTGTTGCCCATATTTGGCCACCTCACCTTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCTCTCCACCATCTGCGTaGGGAGAGAGATACCGTCCA +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGSPPSA*GERYRP
Trigger: TGGACGGTATCTCTCTCCTCACGCAGATGGTGGAGA...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTTGCAGCCATGGGAAGTaGCCTGAAGCAGTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFCSHGK*PEAVEP
Trigger: CGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCA...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGCTGGCTTCAAGAGTaGATAGCGAAGCTGCAAACC +
Preference number: 4 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSRWLQE*IAKLQT
Trigger: GGTTTGCAGCTTCGCTATTCACTCTTGAAGCCAGCG...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS-3UTR GCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAATCTGCCTCTATCCTGTaGCCATCCTCGCCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQSASIL*PSSPAP
Trigger: GGGAGCGGGCGAGGATGGGCACAGGATAGAGGCAGA...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTCACGGCTTTGATATCTaGCACCGGCAGTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GRACLQRARMEGPFGLLTHGFDI*HRQFVL
Trigger: CAGGACAAACTGCCGGTGGCAGATATCAAAGCCGTG...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTGGGCAGTCTGGGGCTaGTGGCTTTCCTGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSWAVWG*WLSCPR
Trigger: CCTTGGGCAGGAAAGCCAGCAGCCCCAGACTGCCCA...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGATCACGAGGAGGCTaGGGCTGCTGCTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQGSRGG*GCCSWD
Trigger: GTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCC...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCTGGAATCCTGCTCGGTaGTTGGGTTGCATCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSWNPAR*LGCILP
Trigger: TGGCAAGATGCAACCCAAGCACCGAGCAGGATTCCA...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396040.6
CDS-3UTR GCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTTGCCAATGGTCCATTTaGGGCACCTGCTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGCQWSI*GTCWWQ
Trigger: TTGCCACCAGCAGGTGCCGCAAATGGACCATTGGCA...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS-3UTR CCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAACCATCGACTCCAAAATaGCCAAGGACCGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTEPSTPK*PRTAAG
Trigger: TCCTGCAGCGGTCCTTGGCCATTTTGGAGTCGATGG...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCTGGTGGGCAAGTTTTTaGGCAGTCTGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSWWASF*AVWGCW
Trigger: CCAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCA...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTCTGCCCTTGGTCTGGTaGGCAAGTTTTTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGLPLVW*ASFWAV
Trigger: GACTGCCCAAAAACTTGCCCACCAGACCAAGGGCAG...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAATCCAGACAGGGGCCTTaGGGCACTGCCCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQSRQGP*GTALGL
Trigger: CAGACCAAGGGCAGTGCCCCAAGGCCCCTGTCTGGA...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCATTCTATGGCCACCTTaGCGATGTCCGCGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSILWPP*RCPRVA
Trigger: CGCCACCCGCGGACATCGTCAAGGTGGCCATAGAAT...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCAGCTGCTGGGCGTTCTaGGCTGGAGATGTGGTTAAT +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGSCWAF*AGDVVN
Trigger: ATTAACCACATCTCCAGCTCAGAACGCCCAGCAGCT...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAATGGGGCACTTCTCCCTaGGGACTCTCTTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTEWGTSP*GLSSKS
Trigger: AGACTTAGAAGAGAGTCCTCAGGGAGAAGTGCCCCA...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGATGCCAGCTAGGGGCTaGAAGTTGCCAGGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGMPARG*KLPGLE
Trigger: CTCTAGCCCTGGCAACTTTCAGCCCCTAGCTGGCAT...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAATGCAGCCATGGGAAGTaGCCTGAAGCAGTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQCSHGK*PEAVEP
Trigger: CGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCA...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGAGTAACATTCTCCACTaGTGCTCAGAGCCTATGGTG +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRSNILH*CSEPMV
Trigger: CACCATAGGCTCTGAGCATCAGTGGAGAATGTTACT...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGCGTGTACATGGACTTaGGTTTCTCCATGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGACTWT*VSPCCH
Trigger: GTGGCAGCATGGAGAAACGCAAGTCCATGTACACGC...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTGGGAATCGGCGGAGGTaGGTCAGGGATCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNAGNRRR*VRDLDV
Trigger: AACATCCAGATCCCTGACGCACCTCCGCCGATTCCC...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCAGGGAATCGGCGGAGGTaGGTCAGGGATCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSGNRRR*VRDLDV
Trigger: AACATCCAGATCCCTGACGCACCTCCGCCGATTCCC...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTGGGAATCGGCGGAGGTaGGTCAGGGATCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFGNRRR*VRDLDV
Trigger: AACATCCAGATCCCTGACGCACCTCCGCCGATTCCC...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCTGGGCAGTCTGGGGCTaGTGGCTTTCCTGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLWAVWG*WLSCPR
Trigger: CCTTGGGCAGGAAAGCCAGCAGCCCCAGACTGCCCA...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp CCAATGTACATAAACATCACCCAATTCAGCAGGTCTAGGGTGGAGCTGAAGAGCGGGGCCTTGGGGCACTaGCCTTGGTCTGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: PMYINITQFSRSRVELKSGALGH*PWSGGQ
Trigger: TTGCCCACCAGACCAAGGGCAGTGCCCCAAGGCCCC...GCTCTTCAGCTCCACCCTAGACCTGCTGAATTGGGTGATGTTTATGTACATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGAGGCTGCGGCTGCTaGTCTTGGGACCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQGGCGC*SWDQRG
Trigger: TCCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCC...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGTCCATACTCGAGGACTaGATTCGTTCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARSILED*IRSWSC
Trigger: GCAGCTCCATGAACGAATCCAGTCCTCGAGTATGGA...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGATCTTCTGCAATTTCTaGTATCGCTCAGTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRIFCNF*YRSVPL
Trigger: GAGCGGCACTGAGCGATACCAGAAATTGCAGAAGAT...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACGTGAAGAACATCGGGTaGAAGTCGTTGCAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHVKNIG*KSLQVS
Trigger: TGAGACCTGCAACGACTTCCACCCGATGTTCTTCAC...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCAGTTGCTGGGCTCCTTaGGAATCGGCGGAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLSCWAP*ESAEVR
Trigger: ACGCACCTCCGCCGATTCCCAAGGAGCCCAGCAACT...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATAGTTGCTGGGCTCCTTaGGAATCGGCGGAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHSCWAP*ESAEVR
Trigger: ACGCACCTCCGCCGATTCCCAAGGAGCCCAGCAACT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAACCTTCTTACTGGCAGTaGGCTTTGCTCTTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTEPSYWQ*ALLLSH
Trigger: GTGGGACAAGAGCAAAGCCCACTGCCAGTAAGAAGG...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCGATGGAAGGGCCCTTTaGCCTTCTTACTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSDGRAL*PSYWQW
Trigger: CCACTGCCAGTAAGAAGGCCAAAGGGCCCTTCCATC...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGTGGTGGGCAAGTTTTTaGGCAGTCTGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGWWASF*AVWGCW
Trigger: CCAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCA...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTTGGTGGGCAAGTTTTTaGGCAGTCTGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFWWASF*AVWGCW
Trigger: CCAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCA...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTTTGGGGCACTGCCCTTaGTCTGGTGGGCAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGLGHCP*SGGQVF
Trigger: AAAAACTTGCCCACCAGACCAAGGGCAGTGCCCCAA...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTGGGGAAAGGAGGATGTaGGGTTTGGTCTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: GRACLQRARMEGPFGLLTGERRM*GLVFSS
Trigger: TGATGAGAAGACCAAACCCCACATCCTCCTTTCCCC...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGGGGGAAAGGAGGATGTaGGGTTTGGTCTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARGERRM*GLVFSS
Trigger: TGATGAGAAGACCAAACCCCACATCCTCCTTTCCCC...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGGACGCAAAGTGGGCATaGGACCTGTGGACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEDAKWA*DLWTVW
Trigger: CCAAACAGTCCACAGGTCCCATGCCCACTTTGCGTC...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTCTTCTGCCTTGGATTTaGCTGAGTTGCCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: GRACLQRARMEGPFGLLTLLPWI*LSCPGL
Trigger: TAAGCCTGGGCAACTCAGCCAAATCCAAGGCAGAAG...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGCTTTGCTTATGTTTATaGAGCTGGAGCCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRLCLCL*SWSPGM
Trigger: CATCCCTGGGCTCCAGCTCCATAAACATAAGCAAAG...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS-3UTR CCA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTATCCTGCTCGGTGCTTaGGTTGCATCTTGCCACATA +
Preference number: 4 (lower is better)
Translates to: GRACLQRARMEGPFGLLTILLGA*VASCHI
Trigger: TATGTGGCAAGATGCAACCCAAGCACCGAGCAGGAT...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396040.6
CDS-3UTR CCA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCGTTTCTTCCTCCCGGTaGGTTCGTGGTCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLVSSSR*VRGLAG
Trigger: GCCAGCGAGACCACGAACCCACCGGGAGGAAGAAAC...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS-3UTR CCA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACATTTGCGGCACCTGCTaGTGGCAATGCGTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHICGTC*WQCVKE
Trigger: TTCCTTTACGCATTGCCACCAGCAGGTGCCGCAAAT...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS-3UTR TCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGCAAAGCCAGTGGGAATaGGGATCCTACAGCGTAAAC +
Preference number: 4 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKQSQWE*GSYSVN
Trigger: GTTTACGCTGTAGGATCCTCATTCCCACTGGCTTTG...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCAAAGCCAGTGGGAATaGGGATCCTACAGCGTAAAC +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGQSQWE*GSYSVN
Trigger: GTTTACGCTGTAGGATCCTCATTCCCACTGGCTTTG...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCCCGTCACCACGGCTTTaGTATCTGCCACCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSPSPRL*YLPPAV
Trigger: AACTGCCGGTGGCAGATATCAAAGCCGTGGTGACGG...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGCTTGTCAGGAGCGATaGAGTTCAGTTGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGACQER*SSVGSL
Trigger: CAAACTGCCAACTGAACTTCATCGCTCCTGACAAGC...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCACAGAATCAGGGCGGTaGGCAAGATGCCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSTESGR*ARCQLG
Trigger: CCCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGT...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGAGGTGGGAGGAGATTTaGGCGCAGATCTTAATTCAA +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRRWEEI*AQILIQ
Trigger: TTGAATTAAGATCTGCGCTCAAATCTCCTCCCACCT...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCCCATCCTGTGGAACTTaGGTTGCAGCAGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSPSCGT*VAAGPP
Trigger: GGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGG...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCCCATCCTGTGGAACTTaGGTTGCAGCAGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSPSCGT*VAAGPP
Trigger: GGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGG...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTGTAAACTTGGATGTCTaGCAGCTTGACCATCCTGTG +
Preference number: 4 (lower is better)
Translates to: GRACLQRARMEGPFGLLTVNLDV*QLDHPV
Trigger: CACAGGATGGTCAAGCTGTCAGACATCCAAGTTTAC...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTAGTGCTCTCATAACCTaGTCCTTCACCACCTGCATT +
Preference number: 4 (lower is better)
Translates to: GRACLQRARMEGPFGLLTSALIT*SFTTCI
Trigger: AATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACT...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACAGTGCTCTCATAACCTaGTCCTTCACCACCTGCATT +
Preference number: 4 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHSALIT*SFTTCI
Trigger: AATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACT...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCGGGAATCGGCGGAGGTaGGTCAGGGATCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLGNRRR*VRDLDV
Trigger: AACATCCAGATCCCTGACGCACCTCCGCCGATTCCC...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTGGAGGCTGCGGCTGCTaGTCTTGGGACCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSGGCGC*SWDQRG
Trigger: TCCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCC...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCACTGTGGAACTTGAGTTaGAGCAGGACCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSLWNLS*SRTSQE
Trigger: CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGTCCATACTCGAGGACTaGATTCGTTCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKSILED*IRSWSC
Trigger: GCAGCTCCATGAACGAATCCAGTCCTCGAGTATGGA...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGTCAGGGCTTCCAGCTTaGCATCCATACTCGAGGACT +
Preference number: 4 (lower is better)
Translates to: SDSLTILWNLSCSRTSQESGLPA*HPYSRT
Trigger: AGTCCTCGAGTATGGATGCCAAGCTGGAAGCCCTGA...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGCAGGACACTATGCCATaGTCCATCAGCTCAACGAAG +
Preference number: 4 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKQDTMP*SISSTK
Trigger: CTTCGTTGAGCTGATGGACCATGGCATAGTGTCCTG...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGAGGTGTGGAATGAGCTaGCCGATGGTGATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGRCGMS*PMVISC
Trigger: GCAGGAGATCACCATCGGCCAGCTCATTCCACACCT...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGTTTGCTCTTGAACTaGTCCAGGGAGCTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKSLLLN*SRELGL
Trigger: CAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACT...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCGACTGGAAATCTTCCTaGTTCATCCTCTCGGACTGG +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGDWKSS*FILSDW
Trigger: CCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTC...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCAGTGACCTGAAGCAGTaGAGCCGAGGAACAGAATCA +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGSDLKQ*SRGTES
Trigger: TGATTCTGTTCCTCGGCTCCACTGCTTCAGGTCACT...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGCTCTTGTCCCACCAGTaGACTGCAGCCATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGLLSHQ*TAAMGS
Trigger: ACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCTTTGGCCTTCTTACTaGCAGTGGGCTTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGLWPSY*QWALLL
Trigger: CAAGAGCAAAGCCCACTGCCAGTAAGAAGGCCAAAG...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCAGCACTGCCCTTGGTCTaGTGGGCAAGTTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSALPLV*WASFWA
Trigger: TGCCCAAAAACTTGCCCACCAGACCAAGGGCAGTGC...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCAGACGCAAAGTGGGCATaGGACCTGTGGACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSDAKWA*DLWTVW
Trigger: CCAAACAGTCCACAGGTCCCATGCCCACTTTGCGTC...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TGGCAGTGGGCTTTGCTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACGGACCTCAGAGATCCTaGTCCAGAAAGTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: WQWALLLSHQWTAAMGSDGPQRS*SRKFPF
Trigger: AAAAGGGAACTTTCTGGACCAGGATCTCTGAGGTCC...GTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCTTATGTTTATGGAGCTaGAGCCCAGGGATGCTCCGA +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGLCLWS*SPGMLR
Trigger: TCGGAGCATCCCTGGGCTCCAGCTCCATAAACATAA...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS-3UTR CCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCTCCCGGTGGGTTCGTaGTCTCGCTGGCTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLLPVGS*SRWLQE
Trigger: CTCTTGAAGCCAGCGAGACCACGAACCCACCGGGAG...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS-3UTR CCA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCTGCGGCACCTGCTGGTaGCAATGCGTAAAGGAACCC +
Preference number: 4 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSCGTCW*QCVKEP
Trigger: GGGTTCCTTTACGCATTGCCACCAGCAGGTGCCGCA...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS-3UTR TCA 90 bp TGGCAGTGGGCTTTGCTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCGAGATGTCTATGGCTaGCTTGTTCACAAAACTTGC +
Preference number: 4 (lower is better)
Translates to: WQWALLLSHQWTAAMGSDRDVYG*LVHKTC
Trigger: GCAAGTTTTGTGAACAAGTCAGCCATAGACATCTCG...GTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp CCAGCTAAACATCTGGAAATGTGGAAACTATTCCGTAAAGCGCAAGAGGACCACGCGCCATCTCATTGTTaGTGGCCCGCTGGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: PAKHLEMWKLFRKAQEDHAPSHC*WPAGLG
Trigger: TCCGAGCCCAGCGGGCCATCAACAATGAGATGGCGC...GTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACATTTCCAGATGTTTAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR TCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGGTTCAGTTGGCAGTTTaGGTCATACAAGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRVQLAV*VIQDGE
Trigger: TTCTCCATCTTGTATGACTCAAACTGCCAACTGAAC...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCATGCCAGCTAGGGGCTaGAAGTTGCCAGGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLMPARG*KLPGLE
Trigger: CTCTAGCCCTGGCAACTTTCAGCCCCTAGCTGGCAT...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTACAGAATCAGGGCGGTaGGCAAGATGCCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSTESGR*ARCQLG
Trigger: CCCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGT...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGAGGTGGGAGGAGATTTaGGCGCAGATCTTAATTCAA +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARRWEEI*AQILIQ
Trigger: TTGAATTAAGATCTGCGCTCAAATCTCCTCCCACCT...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAACCCCAGACTAGCTGGTaGGGAGGGAAGATTTGTCAC +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQPQTSW*GGKICH
Trigger: GTGACAAATCTTCCCTCCTCACCAGCTAGTCTGGGG...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGGTAAACTTGGATGTCTaGCAGCTTGACCATCCTGTG +
Preference number: 4 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKVNLDV*QLDHPV
Trigger: CACAGGATGGTCAAGCTGTCAGACATCCAAGTTTAC...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp CTTCTGACATCCCTCCCAGTGCTGGGAGTTTACAATCCTGATAATGCCTCCAGTGGTCTAGGGTGGAGCTaGAGAGCTGGCATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LLTSLPVLGVYNPDNASSGLGWS*RAGISN
Trigger: GTTGGAGATGCCAGCTCTTCAGCTCCACCCTAGACC...ACTGGAGGCATTATCAGGATTGTAAACTCCCAGCACTGGGAGGGATGTCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCCCTGGAGAGAGAAGGTaGGGTGGCCAAATATGGGCA +
Preference number: 4 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLPGERR*GGQIWA
Trigger: TGCCCATATTTGGCCACCTCACCTTCTCTCTCCAGG...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATACACGTGTCTATACCTaGTTGGGGTCGCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHTRVYT*LGSQDS
Trigger: GCTGTCCTGCGACCCCAAGCAGGTATAGACACGTGT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp TGGCAGTGGGCTTTGCTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACATCGGCATGCTGGAGTaGAAAATATTCATGGTTGGC +
Preference number: 4 (lower is better)
Translates to: WQWALLLSHQWTAAMGSDIGMLE*KIFMVG
Trigger: GCCAACCATGAATATTTTGCACTCCAGCATGCCGAT...GTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTTCTGGTATCGCTCAGTaGCGCTCTCCACCATCTGCG +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSSGIAQ*RSPPSA
Trigger: CGCAGATGGTGGAGAGCGGCACTGAGCGATACCAGA...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAATATCCCAGGACACTATaGCATGGTCCATCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTEYPRTL*HGPSAQ
Trigger: TTGAGCTGATGGACCATGGCATAGTGTCCTGGGATA...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGAGAACATACAGCTGGTaGGCCATCTCATTGTTGATG +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARRTYSW*AISLLM
Trigger: CATCAACAATGAGATGGCGCACCAGCTGTATGTTCT...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp CGGGACTGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCGCGTGTACATGGACTTaGGTTTCTCCATGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RDWKSSWFILSDWRIFRIACTWT*VSPCCH
Trigger: GTGGCAGCATGGAGAAACGCAAGTCCATGTACACGC...GATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR GCA 90 bp TGGCAGTGGGCTTTGCTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCCAAAGGGACATTCATaGTTGTCTTCTCGACTACTG +
Preference number: 4 (lower is better)
Translates to: WQWALLLSHQWTAAMGSDPKGHS*LSSRLL
Trigger: CAGTAGTCGAGAAGACAAGCATGAATGTCCCTTTGG...GTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCACACGGCTTTGATATCTaGCACCGGCAGTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSHGFDI*HRQFVL
Trigger: CAGGACAAACTGCCGGTGGCAGATATCAAAGCCGTG...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCTTGTCACGATCACAGTaGAGACGCAAAGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSLSRSQ*RRKVGM
Trigger: CATGCCCACTTTGCGTCTGCACTGTGATCGTGACAA...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAACTGTGGAACTTGAGTTaGAGCAGGACCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQLWNLS*SRTSQE
Trigger: CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTACGCTTAATACTGCATaGTTGGACCCTTCTGACATC +
Preference number: 4 (lower is better)
Translates to: GRACLQRARMEGPFGLLTTLNTA*LDPSDI
Trigger: GATGTCAGAAGGGTCCAAGCATGCAGTATTAAGCGT...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCGGCCAGAGTGGCTGGTaGTGTGCCACGCTTAATACT +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSGQSGW*CATLNT
Trigger: AGTATTAAGCGTGGCACAGCACCAGCCACTCTGGCC...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAACTGCAATGCATGCAGTaGTCTGGACCATATCATCTC +
Preference number: 4 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTELQCMQ*SGPYHL
Trigger: GAGATGATATGGTCCAGAGCACTGCATGCATTGCAG...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTACTCGTCTGGAATCCTaGTCGGTGCTTGGGTTGCAT +
Preference number: 4 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFTRLES*SVLGLH
Trigger: ATGCAACCCAAGCACCGAGCAGGATTCCAGACGAGT...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396040.6
CDS-3UTR CCA 90 bp CCAATGTACATAAACATCACCCAATTCAGCAGGTCTAGGGTGGAGCTGAAGAGCCCATTGAAGGGGAACTaGAGGCTCTGTCGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: PMYINITQFSRSRVELKSPLKGN*RLCRPA
Trigger: CGCTGGGCGACAGAGCCTCCAGTTCCCCTTCAATGG...GCTCTTCAGCTCCACCCTAGACCTGCTGAATTGGGTGATGTTTATGTACATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCAGGTGTGGAATGAGCTaGCCGATGGTGATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSRCGMS*PMVISC
Trigger: GCAGGAGATCACCATCGGCCAGCTCATTCCACACCT...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACTGTAGAACATACAGCTaGTGCGCCATCTCATTGTTG +
Preference number: 4 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHCRTYS*CAISLL
Trigger: CAACAATGAGATGGCGCACCAGCTGTATGTTCTACA...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAAAATCTCGCGTGTACATaGACTTGCGTTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTENLACT*TCVSPC
Trigger: GCATGGAGAAACGCAAGTCCATGTACACGCGAGATT...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp GCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGCTGGAGAAGCCAACATCCCAGGTaGAGTCTGCGTGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: AYSSDLTGPKEGLGRSWRSQHPR*SLREVH
Trigger: ATGGACTTCACGCAGACTCCACCTGGGATGTTGGCT...TCTCCAGCTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCAGTTTGCTCTTGAACTaGTCCAGGGAGCTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSSLLLN*SRELGL
Trigger: CAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACT...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGTTCATCCTCTCGGACTaGCGGATTTTCAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKFILSD*RIFRIS
Trigger: TGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAA...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAAAAAATCGGGCGGGACTaGAAATCTTCCTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTEKIGRD*KSSWFI
Trigger: GATGAACCAGGAAGATTTCCAGTCCCGCCCGATTTT...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGGCGATGAAGTTCAGTTaGCAGTTTGAGTCATACAAG +
Preference number: 4 (lower is better)
Translates to: MLGRITRRLRLLLLGPKRAMKFS*QFESYK
Trigger: CTTGTATGACTCAAACTGCCAACTGAACTTCATCGC...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCCTCTTGTCCCACCAGTaGACTGCAGCCATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSLLSHQ*TAAMGS
Trigger: ACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGATGGAAGGGCCCTTTaGCCTTCTTACTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQDGRAL*PSYWQW
Trigger: CCACTGCCAGTAAGAAGGCCAAAGGGCCCTTCCATC...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCCTGCCCTTGGTCTGGTaGGCAAGTTTTTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSLPLVW*ASFWAV
Trigger: GACTGCCCAAAAACTTGCCCACCAGACCAAGGGCAG...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGGGAGGATGTGGGGTTTaGTCTTCTCATCAAATAGCT +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARGGCGV*SSHQIA
Trigger: AGCTATTTGATGAGAAGACCAAACCCCACATCCTCC...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCGACCTGTGGACTGTTTaGGAAATTTATGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSDLWTV*EIYARE
Trigger: CTCCCTAGCATAAATTTCCCAAACAGTCCACAGGTC...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGGTAACACCAAACGCTTaGATAGCAACAGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKVTPNA*IATVRP
Trigger: AGGACGGACTGTTGCTATCCAAGCGTTTGGTGTTAC...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCGTGGAGCTGAAGAGCTaGCATCTCCAACAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSVELKS*HLQQAP
Trigger: GGGAGCTTGTTGGAGATGCCAGCTCTTCAGCTCCAC...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp CTCTTGAACTGGTCCAGGGAGCTAGGCTTGGTTGTAAGTGCTCTCATAACCTGCGACACACTGCAAGGCTaGATCGTGTTCACGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLNWSRELGLVVSALITCDTLQG*IVFTAV
Trigger: CACTGCCGTGAACACGATCCAGCCTTGCAGTGTGTC...GCAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACCAGTTCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR TCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCTGATCAATTTCCATaGGTTTGGGGTAGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHSDQFP*VWGRRP
Trigger: CGGGCGCCTACCCCAAACTCATGGAAATTGATCAGA...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATAGCTGCTGGGCGTTCTaGGCTGGAGATGTGGTTAAT +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHSCWAF*AGDVVN
Trigger: ATTAACCACATCTCCAGCTCAGAACGCCCAGCAGCT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTTTGGATTTCTTGATCTaGCCCTTGCAGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGLDFLI*PLQVWN
Trigger: ATTCCACACCTGCAAGGGTCAGATCAAGAAATCCAA...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTGGGGCACTTCTCCCTaGGGACTCTCTTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLWGTSP*GLSSKS
Trigger: AGACTTAGAAGAGAGTCCTCAGGGAGAAGTGCCCCA...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCCTTTCTCTTTCATATaGGGGCAGTCCTTTCCCGTC +
Preference number: 4 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFPFSFI*GQSFPV
Trigger: GACGGGAAAGGACTGCCCTCATATGAAAGAGAAAGG...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGGTTCAGTTGGCAGTTTaGGTCATACAAGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARVQLAV*VIQDGE
Trigger: TTCTCCATCTTGTATGACTCAAACTGCCAACTGAAC...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGAAAAGAAAAAGCTGGTaGTGGGCTGGAGATAGTTCA +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARKRKSW*WAGDSS
Trigger: TGAACTATCTCCAGCCCATCACCAGCTTTTTCTTTT...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS-3UTR GCA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCATGGCCAAGGACCGCTaGAGGATCGAGATGTCTATG +
Preference number: 4 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLMAKDR*RIEMSM
Trigger: CATAGACATCTCGATCCTGCAGCGGTCCTTGGCCAT...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATATGGCCAAGGACCGCTaGAGGATCGAGATGTCTATG +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHMAKDR*RIEMSM
Trigger: CATAGACATCTCGATCCTGCAGCGGTCCTTGGCCAT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAACCAAAGGGACATTCATaGTTGTCTTCTCGACTACTG +
Preference number: 4 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTEPKGHS*LSSRLL
Trigger: CAGTAGTCGAGAAGACAAGCATGAATGTCCCTTTGG...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp ATCGGGTGGAAGTCGTTGCAGGTCTCACTAGCTCCGAGACACACTGCAAGGCTGTCAGCTCTATACTACTaGGGCCAAAGGGACATTCAT +
Preference number: 4 (lower is better)
Translates to: IGWKSLQVSLAPRHTARLSALYY*GQRDIH
Trigger: ATGAATGTCCCTTTGGCCGCAGTAGTATAGAGCTGA...CAGCCTTGCAGTGTGTCTCGGAGCTAGTGAGACCTGCAACGACTTCCACCCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR GCA 90 bp ATCGGGTGGAAGTCGTTGCAGGTCTCACTAGCTCCGAGACACACTGCAAGGCTGGGAGCTGGATACAGATaGAGAAAAACTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: IGWKSLQVSLAPRHTARLGAGYR*RKTPQR
Trigger: CCTTTGAGGAGTTTTTCTGCATCTGTATCCAGCTCC...CAGCCTTGCAGTGTGTCTCGGAGCTAGTGAGACCTGCAACGACTTCCACCCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR GCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAACACGGCTTTGATATCTaGCACCGGCAGTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQHGFDI*HRQFVL
Trigger: CAGGACAAACTGCCGGTGGCAGATATCAAAGCCGTG...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTCAGATACAGTACTCATaGTTGTCAGGAGCGATGAAG +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGQIQYS*LSGAMK
Trigger: CTTCATCGCTCCTGACAAGCATGAGTACTGTATCTG...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp CCAATGTACATAAACATCACCCAATTCAGCAGGTCTAGGGTGGAGCTGAAGAGCAGGGAAGGAAGGGCATaGCTGCAGAGGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: PMYINITQFSRSRVELKSREGRA*LQRARM
Trigger: CATCCTAGCCCTCTGCAGGCATGCCCTTCCTTCCCT...GCTCTTCAGCTCCACCCTAGACCTGCTGAATTGGGTGATGTTTATGTACATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTATACTGATTCTAAGCTaGTGCCACCACAAAGCGACT +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGILILS*CHHKAT
Trigger: AGTCGCTTTGTGGTGGCAGCAGCTTAGAATCAGTAT...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS-3UTR GCA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTGCTCCTTCACCACCTaGATTACCTTTCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLCSFTT*ITFPLP
Trigger: GGGGAGAGGAAAGGTAATGCAGGTGGTGAAGGAGCA...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396040.6
CDS-3UTR GCA 90 bp CTCTTGAACTGGTCCAGGGAGCTAGGCTTGGTTGTAAGTGCTCTCATAACCTGCAGCTCCGAGACACACTaGAAGGCTGGATCGTGTTCA +
Preference number: 4 (lower is better)
Translates to: LLNWSRELGLVVSALITCSSETH*KAGSCS
Trigger: TGAACACGATCCAGCCTTGCAGTGTGTCTCGGAGCT...GCAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACCAGTTCAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR GCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCCATTTGCGGCACCTaGTGGTGGCAATGCGTAAAG +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSSICGT*WWQCVK
Trigger: CTTTACGCATTGCCACCAGCAGGTGCCGCAAATGGA...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS-3UTR CCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCACAGGACACTATGCCATaGTCCATCAGCTCAACGAAG +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSQDTMP*SISSTK
Trigger: CTTCGTTGAGCTGATGGACCATGGCATAGTGTCCTG...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACGGATCGAGATGTCTATaGCTGACTTGTTCACAAAAC +
Preference number: 4 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHGSRCL*LTCSQN
Trigger: GTTTTGTGAACAAGTCAGCCATAGACATCTCGATCC...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTTGTTGATGGCCCGCTaGGCTCGGATGACATGTGTT +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSLLMAR*ARMTCV
Trigger: AACACATGTCATCCGAGCCCAGCGGGCCATCAACAA...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATAGCCAACATCCCAGGTaGAGTCTGCGTGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHSQHPR*SLREVH
Trigger: ATGGACTTCACGCAGACTCCACCTGGGATGTTGGCT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTGACTGGAAATCTTCCTaGTTCATCCTCTCGGACTGG +
Preference number: 4 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNADWKSS*FILSDW
Trigger: CCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTC...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTCAGGACTTTGTGATTTaGCGAAAGCCGACAATACCA +
Preference number: 4 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGQDFVI*RKPTIP
Trigger: TGGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTG...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTAGTTGCTGGGCTCCTTaGGAATCGGCGGAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSSCWAP*ESAEVR
Trigger: ACGCACCTCCGCCGATTCCCAAGGAGCCCAGCAACT...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTAGTGACCTGAAGCAGTaGAGCCGAGGAACAGAATCA +
Preference number: 4 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFSDLKQ*SRGTES
Trigger: TGATTCTGTTCCTCGGCTCCACTGCTTCAGGTCACT...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAACCTTCTTACTGGCAGTaGGCTTTGCTCTTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQPSYWQ*ALLLSH
Trigger: GTGGGACAAGAGCAAAGCCCACTGCCAGTAAGAAGG...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCTGCCCTTGGTCTGGTaGGCAAGTTTTTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSLPLVW*ASFWAV
Trigger: GACTGCCCAAAAACTTGCCCACCAGACCAAGGGCAG...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAAGGAGGATGTGGGGTTTaGTCTTCTCATCAAATAGCT +
Preference number: 4 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTEGGCGV*SSHQIA
Trigger: AGCTATTTGATGAGAAGACCAAACCCCACATCCTCC...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGGGGGAAAGGAGGATGTaGGGTTTGGTCTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGGERRM*GLVFSS
Trigger: TGATGAGAAGACCAAACCCCACATCCTCCTTTCCCC...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGTTCAAGTGTAACTGGTaGTGCGAGATGATTCTAGAG +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARFKCNW*CEMILE
Trigger: CTCTAGAATCATCTCGCACCACCAGTTACACTTGAA...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGGACCTGTGGACTGTTTaGGAAATTTATGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKDLWTV*EIYARE
Trigger: CTCCCTAGCATAAATTTCCCAAACAGTCCACAGGTC...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCAGTGCAGACGCAAAGTaGGCATGGGACCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLSADAK*AWDLWT
Trigger: AGTCCACAGGTCCCATGCCCACTTTGCGTCTGCACT...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGGTAACACCAAACGCTTaGATAGCAACAGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEVTPNA*IATVRP
Trigger: AGGACGGACTGTTGCTATCCAAGCGTTTGGTGTTAC...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGCATAGCTCCCCGTCTTaGTACTTCTCAATATATCCC +
Preference number: 4 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKHSSPS*YFSIYP
Trigger: GGGATATATTGAGAAGTACCAAGACGGGGAGCTATG...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS-3UTR CCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCAGGGATGCTCCGATTaGCAGGAGTCGGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSQGCSD*QESGKD
Trigger: ATCTTTCCCCGACTCCTGCCAATCGGAGCATCCCTG...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS-3UTR TCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTGAACGCAGTTGCTTCTaGGCCAAAATATTCGCCATC +
Preference number: 4 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNAERSCF*AKIFAI
Trigger: GATGGCGAATATTTTGGCTCAGAAGCAACTGCGTTC...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTGAACGCAGTTGCTTCTaGGCCAAAATATTCGCCATC +
Preference number: 4 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFERSCF*AKIFAI
Trigger: GATGGCGAATATTTTGGCTCAGAAGCAACTGCGTTC...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCTCAGGCGTTGCTGTTTaGTCAGCTCTAAGATTTCTG +
Preference number: 4 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSSGVAV*SALRFL
Trigger: CAGAAATCTTAGAGCTGATCAAACAGCAACGCCTGA...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTTGGGGCACTTCTCCCTaGGGACTCTCTTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSWGTSP*GLSSKS
Trigger: AGACTTAGAAGAGAGTCCTCAGGGAGAAGTGCCCCA...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTCCGTCACCACGGCTTTaGTATCTGCCACCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSPSPRL*YLPPAV
Trigger: AACTGCCGGTGGCAGATATCAAAGCCGTGGTGACGG...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCCCTTTCTCTTTCATATaGGGGCAGTCCTTTCCCGTC +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSPFSFI*GQSFPV
Trigger: GACGGGAAAGGACTGCCCTCATATGAAAGAGAAAGG...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCGTTCAGTTGGCAGTTTaGGTCATACAAGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGVQLAV*VIQDGE
Trigger: TTCTCCATCTTGTATGACTCAAACTGCCAACTGAAC...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp ACAGATGGCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGGCTTGTCAGGAGCGATaGAGTTCAGTTGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: TDGILFRSHRSKGGSREEACQER*SSVGSL
Trigger: CAAACTGCCAACTGAACTTCATCGCTCCTGACAAGC...CTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGCCATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCGCTTGTCAGGAGCGATaGAGTTCAGTTGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLACQER*SSVGSL
Trigger: CAAACTGCCAACTGAACTTCATCGCTCCTGACAAGC...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGCTTGTCAGGAGCGATaGAGTTCAGTTGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQACQER*SSVGSL
Trigger: CAAACTGCCAACTGAACTTCATCGCTCCTGACAAGC...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTCCATCCTGTGGAACTTaGGTTGCAGCAGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSPSCGT*VAAGPP
Trigger: GGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGG...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATGACGGTAAAGAGAAATaGCCTGGATGCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHDGKEK*PGCFHS
Trigger: GCTGTGGAAGCATCCAGGTCATTTCTCTTTACCGTC...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGCACATGGTCACAAAATaGATGGAAACAGATGGCATA +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARHMVTK*METDGI
Trigger: TATGCCATCTGTTTCCATTCATTTTGTGACCATGTG...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTAGAGTCGTCCCCCTaGAGAACAATGTGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSLESSP*RTMCWN
Trigger: ATTCCAGCACATTGTTCTTCAGGGGGACGACTCTAA...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS-3UTR GCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTATATTCGCCATCTCCTaGCTCCTCTCATCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSIFAIS*LLSSGA
Trigger: GGCTCCTGATGAGAGGAGGCAGGAGATGGCGAATAT...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp TGTGGAAACTATTCCGTAAAGCGCAAGAGGACCACACGCTCGGAAGAGACATCAGCGTGTACATGGACTTaGGTTTCTCCATGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CGNYSVKRKRTTRSEETSACTWT*VSPCCH
Trigger: GTGGCAGCATGGAGAAACGCAAGTCCATGTACACGC...TGATGTCTCTTCCGAGCGTGTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR GCA 90 bp GCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGCTGGAGAAGTGCTCTCATAACCTaGTCCTTCACCACCTGCATT +
Preference number: 4 (lower is better)
Translates to: AYSSDLTGPKEGLGRSWRSALIT*SFTTCI
Trigger: AATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACT...TCTCCAGCTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTAGTGCTCTCATAACCTaGTCCTTCACCACCTGCATT +
Preference number: 4 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFSALIT*SFTTCI
Trigger: AATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACT...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCACGGCTTTGATATCTaGCACCGGCAGTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLHGFDI*HRQFVL
Trigger: CAGGACAAACTGCCGGTGGCAGATATCAAAGCCGTG...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCCAGATACAGTACTCATaGTTGTCAGGAGCGATGAAG +
Preference number: 4 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSQIQYS*LSGAMK
Trigger: CTTCATCGCTCCTGACAAGCATGAGTACTGTATCTG...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTGCTCGGTGCTTGGGTTaGATCTTGCCACATACATTT +
Preference number: 4 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNAARCLG*ILPHTF
Trigger: AAATGTATGTGGCAAGATGCAACCCAAGCACCGAGC...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396040.6
CDS-3UTR GCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAACTTGAGACCAACGTTTaGTATCTCTTCCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTELETNV*YLFPLH
Trigger: ATGAAGAGGGAAGAGATAGCAAACGTTGGTCTCAAG...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS-3UTR CCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCTCAGGGCTTCCAGCTTaGCATCCATACTCGAGGACT +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLSGLPA*HPYSRT
Trigger: AGTCCTCGAGTATGGATGCCAAGCTGGAAGCCCTGA...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCAATCTTCTGCAATTTCTaGTATCGCTCAGTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSIFCNF*YRSVPL
Trigger: GAGCGGCACTGAGCGATACCAGAAATTGCAGAAGAT...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp TGTGGAAACTATTCCGTAAAGCGCAAGAGGACCACACGCTCGGAAGAGACATCATTGTTGATGGCCCGCTaGGCTCGGATGACATGTGTT +
Preference number: 4 (lower is better)
Translates to: CGNYSVKRKRTTRSEETSLLMAR*ARMTCV
Trigger: AACACATGTCATCCGAGCCCAGCGGGCCATCAACAA...TGATGTCTCTTCCGAGCGTGTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR CCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTTTGTTGATGGCCCGCTaGGCTCGGATGACATGTGTT +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSLLMAR*ARMTCV
Trigger: AACACATGTCATCCGAGCCCAGCGGGCCATCAACAA...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp ATCGGGTGGAAGTCGTTGCAGGTCTCACTAGCTCCGAGACACACTGCAAGGCTGTCTCACATAGCATCTTaGTCAGCTCTATACTACTGC +
Preference number: 4 (lower is better)
Translates to: IGWKSLQVSLAPRHTARLSHIAS*SALYYC
Trigger: GCAGTAGTATAGAGCTGACCAAGATGCTATGTGAGA...CAGCCTTGCAGTGTGTCTCGGAGCTAGTGAGACCTGCAACGACTTCCACCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATAGTTTGCTCTTGAACTaGTCCAGGGAGCTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHSLLLN*SRELGL
Trigger: CAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCGACTGGAAATCTTCCTaGTTCATCCTCTCGGACTGG +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSDWKSS*FILSDW
Trigger: CCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTC...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp GCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGCTGGAGAAAAATCGGGCGGGACTaGAAATCTTCCTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: AYSSDLTGPKEGLGRSWRKIGRD*KSSWFI
Trigger: GATGAACCAGGAAGATTTCCAGTCCCGCCCGATTTT...TCTCCAGCTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCAAAAATCGGGCGGGACTaGAAATCTTCCTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSKIGRD*KSSWFI
Trigger: GATGAACCAGGAAGATTTCCAGTCCCGCCCGATTTT...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGGCGATGAAGTTCAGTTaGCAGTTTGAGTCATACAAG +
Preference number: 4 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKAMKFS*QFESYK
Trigger: CTTGTATGACTCAAACTGCCAACTGAACTTCATCGC...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGACGGTTCCAAGGCGTaGGTGTGTTTTCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQDGSKA*VCFHSS
Trigger: AGAGGAATGAAAACACACCCACGCCTTGGAACCGTC...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCAGTGACCTGAAGCAGTaGAGCCGAGGAACAGAATCA +
Preference number: 4 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSSDLKQ*SRGTES
Trigger: TGATTCTGTTCCTCGGCTCCACTGCTTCAGGTCACT...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCTTCTTACTGGCAGTaGGCTTTGCTCTTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSPSYWQ*ALLLSH
Trigger: GTGGGACAAGAGCAAAGCCCACTGCCAGTAAGAAGG...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATCTTTGGCCTTCTTACTaGCAGTGGGCTTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHLWPSY*QWALLL
Trigger: CAAGAGCAAAGCCCACTGCCAGTAAGAAGGCCAAAG...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCAGCTTGACCATCCTGTaGAACTTGAGTTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSSLTIL*NLSCSR
Trigger: CCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCT...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATAGCTTGACCATCCTGTaGAACTTGAGTTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHSLTIL*NLSCSR
Trigger: CCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGATGCATGCAGTGCTCTaGACCATATCATCTCAACCC +
Preference number: 4 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGMHAVL*TISSQP
Trigger: GGGTTGAGATGATATGGTCCAGAGCACTGCATGCAT...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGTCTAGGGAGGAGCTaGAGAATGCTGCCTTTCATA +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQGLGRS*RMLPFI
Trigger: TATGAAAGGCAGCATTCTCCAGCTCCTCCCTAGACC...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR CAA 72 bp ACTTGGATGTCTGACAGCTTGACCATCCTGTGGAACTaGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACA +
Preference number: 4 (lower is better)
Translates to: TWMSDSLTILWN*SCSRTSQEKVT
Trigger: TGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGACATCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
3UTR CAA 72 bp TGCAGTTTGCTCTTGAACTGGTCCAGGGAGCTAGGCTaGGTTGTAAGTGCTCTCATAACCTGCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: CSLLLNWSRELG*VVSALITCSFT
Trigger: GGTGAAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR TCA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCAGAGGTCATGGCTATTaGGCACCATCGACTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSRGHGY*APSTPK
Trigger: TTTTGGAGTCGATGGTGCTCAATAGCCATGACCTCT...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTTGGATTTCTTGATCTaGCCCTTGCAGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNALDFLI*PLQVWN
Trigger: ATTCCACACCTGCAAGGGTCAGATCAAGAAATCCAA...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTCAGGCGTTGCTGTTTaGTCAGCTCTAAGATTTCTG +
Preference number: 4 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNASGVAV*SALRFL
Trigger: CAGAAATCTTAGAGCTGATCAAACAGCAACGCCTGA...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATCAGGCGTTGCTGTTTaGTCAGCTCTAAGATTTCTG +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSSGVAV*SALRFL
Trigger: CAGAAATCTTAGAGCTGATCAAACAGCAACGCCTGA...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCCTTTCTCTTTCATATaGGGGCAGTCCTTTCCCGTC +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLPFSFI*GQSFPV
Trigger: GACGGGAAAGGACTGCCCTCATATGAAAGAGAAAGG...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGATGGAGCGAGACTACTaGTTTCACCATTTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEMERDY*FHHLCF
Trigger: AAAGCACAAATGGTGAAATCAGTAGTCTCGCTCCAT...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTTGCCTCCAGTGCAAATaGCTTAAGAAACATCCTTCG +
Preference number: 4 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFCLQCK*LKKHPS
Trigger: CGAAGGATGTTTCTTAAGTCATTTGCACTGGAGGCA...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCACCACCAGATGGTTCCTaGGTAAGCTTGTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSPPDGS*VSLFMK
Trigger: TTTCATGAACAAGCTTACTCAGGAACCATCTGGTGG...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS-3UTR GCA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGTTTGAACTATCGGCATaGTGGAGTGCAAAATATTCA +
Preference number: 4 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARFELSA*WSAKYS
Trigger: TGAATATTTTGCACTCCAGCATGCCGATAGTTCAAA...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp GCGGGACTGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATTGCTCCTTCACCACCTaGATTACCTTGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: AGLEIFLVHPLGLADFQDCSFTT*ITLLKS
Trigger: AGACTTCAACAAGGTAATGCAGGTGGTGAAGGAGCA...ATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR GCA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGAGGCTTGGTTGTAAGTaGTCTCATAACCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGRLGCK*SHNLLL
Trigger: AAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCT...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCTTGTCACGATCACAGTaGAGACGCAAAGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLLSRSQ*RRKVGM
Trigger: CATGCCCACTTTGCGTCTGCACTGTGATCGTGACAA...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATAGGTTTATAAACTCCTaGGCAAACGTGACATCCCGG +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHRFINS*ANVTSR
Trigger: CCGGGATGTCACGTTTGCCCAGGAGTTTATAAACCT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp CTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCTCAGTGTAGCTCAGGTTAATCTCGCGTGTACATaGACTTGCGTTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: LVHPLGLADFQDLSVAQVNLACT*TCVSPC
Trigger: GCATGGAGAAACGCAAGTCCATGTACACGCGAGATT...AACCTGAGCTACACTGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCAGTTTGCTCTTGAACTaGTCCAGGGAGCTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLSLLLN*SRELGL
Trigger: CAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACT...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp AGAGAGAAGGTGAGGTGGCCAAATATGGGCAACAATCCTTCCCCACATGGTCACTTCATCCTCTCGGACTaGCGGATTTTCAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: REKVRWPNMGNNPSPHGHFILSD*RIFRIS
Trigger: TGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAA...GTGACCATGTGGGGAAGGATTGTTGCCCATATTTGGCCACCTCACCTTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCTTCATCCTCTCGGACTaGCGGATTTTCAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSFILSD*RIFRIS
Trigger: TGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAA...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTTCATCCTCTCGGACTaGCGGATTTTCAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSFILSD*RIFRIS
Trigger: TGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAA...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp CTGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCTCAGTGACTGGAAATCTTCCTaGTTCATCCTCTCGGACTGG +
Preference number: 4 (lower is better)
Translates to: LEIFLVHPLGLADFQDLSDWKSS*FILSDW
Trigger: CCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTC...ACTGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCGACTGGAAATCTTCCTaGTTCATCCTCTCGGACTGG +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLDWKSS*FILSDW
Trigger: CCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTC...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCTTGAGTCATACAAGATaGAGAAAGCGAGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGLSHTR*RKRVQA
Trigger: TGCTTGAACTCGCTTTCTCCATCTTGTATGACTCAA...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAATTGAGTCATACAAGATaGAGAAAGCGAGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTELSHTR*RKRVQA
Trigger: TGCTTGAACTCGCTTTCTCCATCTTGTATGACTCAA...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCGACGGTTCCAAGGCGTaGGTGTGTTTTCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLDGSKA*VCFHSS
Trigger: AGAGGAATGAAAACACACCCACGCCTTGGAACCGTC...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCTTTGGCCTTCTTACTaGCAGTGGGCTTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSLWPSY*QWALLL
Trigger: CAAGAGCAAAGCCCACTGCCAGTAAGAAGGCCAAAG...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CCAATGTACATAAACATCACCCAATTCAGCAGGTCTAGGGTGGAGCTGAAGAGCTTGGGGCACTGCCCTTaGTCTGGTGGGCAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: PMYINITQFSRSRVELKSLGHCP*SGGQVF
Trigger: AAAAACTTGCCCACCAGACCAAGGGCAGTGCCCCAA...GCTCTTCAGCTCCACCCTAGACCTGCTGAATTGGGTGATGTTTATGTACATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCTTCAAGTGTAACTGGTaGTGCGAGATGATTCTAGAG +
Preference number: 4 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSFKCNW*CEMILE
Trigger: CTCTAGAATCATCTCGCACCACCAGTTACACTTGAA...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCGTAACACCAAACGCTTaGATAGCAACAGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSVTPNA*IATVRP
Trigger: AGGACGGACTGTTGCTATCCAAGCGTTTGGTGTTAC...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCAGCTTGACCATCCTGTaGAACTTGAGTTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLSLTIL*NLSCSR
Trigger: CCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCT...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCAGAAACATCCTTCGCTaGGCTCTGACCTATAATTTA +
Preference number: 4 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGRNILR*ALTYNL
Trigger: TAAATTATAGGTCAGAGCCCAGCGAAGGATGTTTCT...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp AGAGAGAAGGTGAGGTGGCCAAATATGGGCAACAATCCTTCCCCACATGGTCACCATCCCTCCCAGTGCTaGGAGTTTACAATCCTGATA +
Preference number: 4 (lower is better)
Translates to: REKVRWPNMGNNPSPHGHHPSQC*EFTILI
Trigger: TATCAGGATTGTAAACTCCCAGCACTGGGAGGGATG...GTGACCATGTGGGGAAGGATTGTTGCCCATATTTGGCCACCTCACCTTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCAGGCGTTGCTGTTTaGTCAGCTCTAAGATTTCTG +
Preference number: 4 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLSGVAV*SALRFL
Trigger: CAGAAATCTTAGAGCTGATCAAACAGCAACGCCTGA...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCAGTTCAGTTGGCAGTTTaGGTCATACAAGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSVQLAV*VIQDGE
Trigger: TTCTCCATCTTGTATGACTCAAACTGCCAACTGAAC...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp GACTTAAGAAACATCCTTCGCTGGGCTCTGACCTATAATTTATTAACCCACGGTACAGAATCAGGGCGGTaGGCAAGATGCCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: DLRNILRWALTYNLLTHGTESGR*ARCQLG
Trigger: CCCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGT...ACCGTGGGTTAATAAATTATAGGTCAGAGCCCAGCGAAGGATGTTTCTTAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCAGGTGGGAGGAGATTTaGGCGCAGATCTTAATTCAA +
Preference number: 4 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSRWEEI*AQILIQ
Trigger: TTGAATTAAGATCTGCGCTCAAATCTCCTCCCACCT...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR TCA 90 bp CACTTGTGCAAGTTATTCCATTTCACTGAAGCCAGAAGAGATTTTCATGTGATCCATCAGTTATGTGGCTaGGGTCAGGCCCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HLCKLFHFTEARRDFHVIHQLCG*GQARGG
Trigger: GCCTCCCCGGGCCTGACCTCAGCCACATAACTGATG...GATCACATGAAAATCTCTTCTGGCTTCAGTGAAATGGAATAACTTGCACAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR GCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTATATTCGCCATCTCCTaGCTCCTCTCATCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSIFAIS*LLSSGA
Trigger: GGCTCCTGATGAGAGGAGGCAGGAGATGGCGAATAT...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp CTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCTCAGTGTAGCTCAGGTTAGAACATACAGCTGGTaGGCCATCTCATTGTTGATG +
Preference number: 4 (lower is better)
Translates to: LVHPLGLADFQDLSVAQVRTYSW*AISLLM
Trigger: CATCAACAATGAGATGGCGCACCAGCTGTATGTTCT...AACCTGAGCTACACTGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR GCA 90 bp GCTCTTGAACTGGTCCAGGGAGCTAGGCTTGGTTGTAAGTGCTCTCATAACCTGCCAAAGGGACATTCATaGTTGTCTTCTCGACTACTG +
Preference number: 4 (lower is better)
Translates to: ALELVQGARLGCKCSHNLPKGHS*LSSRLL
Trigger: CAGTAGTCGAGAAGACAAGCATGAATGTCCCTTTGG...CAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACCAGTTCAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR GCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCAGCTCTATACTACTaGGGCCAAAGGGACATTCAT +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSSALYY*GQRDIH
Trigger: ATGAATGTCCCTTTGGCCGCAGTAGTATAGAGCTGA...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp AGAGAGAAGGTGAGGTGGCCAAATATGGGCAACAATCCTTCCCCACATGGTCACTGCTCCTTCACCACCTaGATTACCTTGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: REKVRWPNMGNNPSPHGHCSFTT*ITLLKS
Trigger: AGACTTCAACAAGGTAATGCAGGTGGTGAAGGAGCA...GTGACCATGTGGGGAAGGATTGTTGCCCATATTTGGCCACCTCACCTTCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCAGGCTTGGTTGTAAGTaGTCTCATAACCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLRLGCK*SHNLLL
Trigger: AAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCT...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp ACAGATGGCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGCAGATACAGTACTCATaGTTGTCAGGAGCGATGAAG +
Preference number: 4 (lower is better)
Translates to: TDGILFRSHRSKGGSREEQIQYS*LSGAMK
Trigger: CTTCATCGCTCCTGACAAGCATGAGTACTGTATCTG...CTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGCCATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGAAGTGTAACTGGTGGTaGGAGATGATTCTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGKCNWW*EMILER
Trigger: TCTCTCTAGAATCATCTCGCACCACCAGTTACACTT...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp CCAATGTACATAAACATCACCCAATTCAGCAGGTCTAGGGTGGAGCTGAAGAGCTTGTCACGATCACAGTaGAGACGCAAAGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PMYINITQFSRSRVELKSLSRSQ*RRKVGM
Trigger: CATGCCCACTTTGCGTCTGCACTGTGATCGTGACAA...GCTCTTCAGCTCCACCCTAGACCTGCTGAATTGGGTGATGTTTATGTACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTAGTGCAAAATATTCATaGTTGGCAAGAGACCACCCA +
Preference number: 4 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFSAKYS*LARDHP
Trigger: TGGGTGGTCTCTTGCCAACCATGAATATTTTGCACT...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp GCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGCTGGAGAGAACTATCGGCATGCTaGAGTGCAAAATATTCATGG +
Preference number: 4 (lower is better)
Translates to: AYSSDLTGPKEGLGRSWRELSAC*SAKYSW
Trigger: CCATGAATATTTTGCACTCCAGCATGCCGATAGTTC...TCTCCAGCTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTGAACTATCGGCATGCTaGAGTGCAAAATATTCATGG +
Preference number: 4 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFELSAC*SAKYSW
Trigger: CCATGAATATTTTGCACTCCAGCATGCCGATAGTTC...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp TTGTTCAGGAGCTGGATACAGATGCAGAAAAACTCCTCAAAGGATCTGTCGTGGAGCCAACATCCCAGGTaGAGTCTGCGTGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LFRSWIQMQKNSSKDLSWSQHPR*SLREVH
Trigger: ATGGACTTCACGCAGACTCCACCTGGGATGTTGGCT...CCACGACAGATCCTTTGAGGAGTTTTTCTGCATCTGTATCCAGCTCCTGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATCTCACATAGCATCTTaGTCAGCTCTATACTACTGC +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSSHIAS*SALYYC
Trigger: GCAGTAGTATAGAGCTGACCAAGATGCTATGTGAGA...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp GCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGCTGGAGAGTCTTGTTCAGGAGCTaGATACAGATGCAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: AYSSDLTGPKEGLGRSWRVLFRS*IQMQKN
Trigger: GTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGAC...TCTCCAGCTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp AATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCTCAGTGTAGCTTCATCCTCTCGGACTaGCGGATTTTCAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: NLPGSSSRTGGFSGSQCSFILSD*RIFRIS
Trigger: TGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAA...GCTACACTGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTAAAATCGGGCGGGACTaGAAATCTTCCTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSKIGRD*KSSWFI
Trigger: GATGAACCAGGAAGATTTCCAGTCCCGCCCGATTTT...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCCAGGACTTTGTGATTTaGCGAAAGCCGACAATACCA +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSQDFVI*RKPTIP
Trigger: TGGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTG...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCAGCGATGAAGTTCAGTTaGCAGTTTGAGTCATACAAG +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSAMKFS*QFESYK
Trigger: CTTGTATGACTCAAACTGCCAACTGAACTTCATCGC...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCAAGTGTAACTGGTaGTGCGAGATGATTCTAGAG +
Preference number: 4 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSFKCNW*CEMILE
Trigger: CTCTAGAATCATCTCGCACCACCAGTTACACTTGAA...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTTAATACTGCATGCTTaGACCCTTCTGACATCCCTC +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHLILHA*TLLTSL
Trigger: GAGGGATGTCAGAAGGGTCCAAGCATGCAGTATTAA...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp AGAGAGAAGGTGAGGTGGCCAAATATGGGCAACAATCCTTCCCCACATGGTCACAGAGAGAAGGTGAGGTaGCCAAATATGGGCAACAAT +
Preference number: 4 (lower is better)
Translates to: REKVRWPNMGNNPSPHGHREKVR*PNMGNN
Trigger: ATTGTTGCCCATATTTGGCCACCTCACCTTCTCTCT...GTGACCATGTGGGGAAGGATTGTTGCCCATATTTGGCCACCTCACCTTCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATACTTTACTTCTGCCTTaGATTTGGCTGAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHTLLLP*IWLSCP
Trigger: TGGGCAACTCAGCCAAATCCAAGGCAGAAGTAAAGT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
3UTR CAA 72 bp CAACATCAGTCTTCCTACTTTACTTCTGCCTTGGATTaGGCTGAGTTGCCCAGGCTTAGGAAACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QHQSSYFTSALD*AELPRLRKLQA
Trigger: TGCCTGCAGTTTCCTAAGCCTGGGCAACTCAGCCAAATCCAAGGCAGAAGTAAAGTAGGAAGACTGATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTGTGATATAGAAGTTTaGACTATCGGCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHCDIEV*TIGMLE
Trigger: CTCCAGCATGCCGATAGTTCAAACTTCTATATCACA...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTGTGATATAGAAGTTTaGACTATCGGCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLCDIEV*TIGMLE
Trigger: CTCCAGCATGCCGATAGTTCAAACTTCTATATCACA...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR TCA 90 bp CCAATGTACATAAACATCACCCAATTCAGCAGGTCTAGGGTGGAGCTGAAGAGCAGAGGTCATGGCTATTaGGCACCATCGACTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PMYINITQFSRSRVELKSRGHGY*APSTPK
Trigger: TTTTGGAGTCGATGGTGCTCAATAGCCATGACCTCT...GCTCTTCAGCTCCACCCTAGACCTGCTGAATTGGGTGATGTTTATGTACATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTCCTTTCTCTTTCATATaGGGGCAGTCCTTTCCCGTC +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSPFSFI*GQSFPV
Trigger: GACGGGAAAGGACTGCCCTCATATGAAAGAGAAAGG...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAATGGAGCGAGACTACTaGTTTCACCATTTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQMERDY*FHHLCF
Trigger: AAAGCACAAATGGTGAAATCAGTAGTCTCGCTCCAT...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTATCGGCATGCTGGAGTaGAAAATATTCATGGTTGGC +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSIGMLE*KIFMVG
Trigger: GCCAACCATGAATATTTTGCACTCCAGCATGCCGAT...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp CCAATGTACATAAACATCACCCAATTCAGCAGGTCTAGGGTGGAGCTGAAGAGCTATCCCAGGACACTATaGCATGGTCCATCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PMYINITQFSRSRVELKSYPRTL*HGPSAQ
Trigger: TTGAGCTGATGGACCATGGCATAGTGTCCTGGGATA...GCTCTTCAGCTCCACCCTAGACCTGCTGAATTGGGTGATGTTTATGTACATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp CTTCTGACATCCCTCCCAGTGCTGGGAGTTTACAATCCTGATAATGCCTCCAGTAGAACATACAGCTGGTaGGCCATCTCATTGTTGATG +
Preference number: 4 (lower is better)
Translates to: LLTSLPVLGVYNPDNASSRTYSW*AISLLM
Trigger: CATCAACAATGAGATGGCGCACCAGCTGTATGTTCT...ACTGGAGGCATTATCAGGATTGTAAACTCCCAGCACTGGGAGGGATGTCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCTCAGCTCTATACTACTaGGGCCAAAGGGACATTCAT +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLSALYY*GQRDIH
Trigger: ATGAATGTCCCTTTGGCCGCAGTAGTATAGAGCTGA...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTGGAGCTGGATACAGATaGAGAAAAACTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSGAGYR*RKTPQR
Trigger: CCTTTGAGGAGTTTTTCTGCATCTGTATCCAGCTCC...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTAGGCTTGGTTGTAAGTaGTCTCATAACCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSRLGCK*SHNLLL
Trigger: AAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCT...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGGGGGCCTTGGGGCACTaGCCTTGGTCTGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: PFYSTACLRECYFQEDVWGALGH*PWSGGQ
Trigger: TTGCCCACCAGACCAAGGGCAGTGCCCCAAGGCCCC...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000396045.7
CDS-3UTR CCA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCAGTGCAAAATATTCATaGTTGGCAAGAGACCACCCA +
Preference number: 4 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSSAKYS*LARDHP
Trigger: TGGGTGGTCTCTTGCCAACCATGAATATTTTGCACT...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp CTTCTGACATCCCTCCCAGTGCTGGGAGTTTACAATCCTGATAATGCCTCCAGTTGTAGAACATACAGCTaGTGCGCCATCTCATTGTTG +
Preference number: 4 (lower is better)
Translates to: LLTSLPVLGVYNPDNASSCRTYS*CAISLL
Trigger: CAACAATGAGATGGCGCACCAGCTGTATGTTCTACA...ACTGGAGGCATTATCAGGATTGTAAACTCCCAGCACTGGGAGGGATGTCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp TGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCTCAGTGTGTAGAACATACAGCTaGTGCGCCATCTCATTGTTG +
Preference number: 4 (lower is better)
Translates to: WKSSWFILSDWRIFRISVCRTYS*CAISLL
Trigger: CAACAATGAGATGGCGCACCAGCTGTATGTTCTACA...CACTGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CCA 90 bp AACATCTGGAAATGTGGAAACTATTCCGTAAAGCGCAAGAGGACCACACGCTCGAATCTCGCGTGTACATaGACTTGCGTTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: NIWKCGNYSVKRKRTTRSNLACT*TCVSPC
Trigger: GCATGGAGAAACGCAAGTCCATGTACACGCGAGATT...CGAGCGTGTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACATTTCCAGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR CCA 90 bp ACAGATGGCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGTCTCACATAGCATCTTaGTCAGCTCTATACTACTGC +
Preference number: 4 (lower is better)
Translates to: TDGILFRSHRSKGGSREESHIAS*SALYYC
Trigger: GCAGTAGTATAGAGCTGACCAAGATGCTATGTGAGA...CTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGCCATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGTGAAGAACATCGGGTaGAAGTCGTTGCAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSVKNIG*KSLQVS
Trigger: TGAGACCTGCAACGACTTCCACCCGATGTTCTTCAC...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATGTCTTGTTCAGGAGCTaGATACAGATGCAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHVLFRS*IQMQKN
Trigger: GTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGAC...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCAGGACTTTGTGATTTaGCGAAAGCCGACAATACCA +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSQDFVI*RKPTIP
Trigger: TGGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTG...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCAGGACTTTGTGATTTaGCGAAAGCCGACAATACCA +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLQDFVI*RKPTIP
Trigger: TGGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTG...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTTGAGTCATACAAGATaGAGAAAGCGAGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNALSHTR*RKRVQA
Trigger: TGCTTGAACTCGCTTTCTCCATCTTGTATGACTCAA...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGCGATGAAGTTCAGTTaGCAGTTTGAGTCATACAAG +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQAMKFS*QFESYK
Trigger: CTTGTATGACTCAAACTGCCAACTGAACTTCATCGC...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CCA 90 bp GACTTAAGAAACATCCTTCGCTGGGCTCTGACCTATAATTTATTAACCCACGGTGATGGAAGGGCCCTTTaGCCTTCTTACTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: DLRNILRWALTYNLLTHGDGRAL*PSYWQW
Trigger: CCACTGCCAGTAAGAAGGCCAAAGGGCCCTTCCATC...ACCGTGGGTTAATAAATTATAGGTCAGAGCCCAGCGAAGGATGTTTCTTAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTGGAGGATGTGGGGTTTaGTCTTCTCATCAAATAGCT +
Preference number: 4 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSGGCGV*SSHQIA
Trigger: AGCTATTTGATGAGAAGACCAAACCCCACATCCTCC...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCGACCTGTGGACTGTTTaGGAAATTTATGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLDLWTV*EIYARE
Trigger: CTCCCTAGCATAAATTTCCCAAACAGTCCACAGGTC...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAATGGAATACCACCAGATaGTTCCTGAGTAAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQWNTTR*FLSKLV
Trigger: AACAAGCTTACTCAGGAACCATCTGGTGGTATTCCA...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS-3UTR TCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGTAAACTTGGATGTCTaGCAGCTTGACCATCCTGTG +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSVNLDV*QLDHPV
Trigger: CACAGGATGGTCAAGCTGTCAGACATCCAAGTTTAC...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CCA 90 bp TCATTTCCTTCCATGTCTTGTTCAGGAGCTGGATACAGATGCAGAAAAACTCCTTTGTTGATGGCCCGCTaGGCTCGGATGACATGTGTT +
Preference number: 4 (lower is better)
Translates to: SFPSMSCSGAGYRCRKTPLLMAR*ARMTCV
Trigger: AACACATGTCATCCGAGCCCAGCGGGCCATCAACAA...AGGAGTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGACATGGAAGGAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CCA 90 bp CATTTCCTTCCATGTCTTGTTCAGGAGCTGGATACAGATGCAGAAAAACTCCTCGTGAAGAACATCGGGTaGAAGTCGTTGCAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HFLPCLVQELDTDAEKLLVKNIG*KSLQVS
Trigger: TGAGACCTGCAACGACTTCCACCCGATGTTCTTCAC...GAGGAGTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGACATGGAAGGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CCA 90 bp AATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCTCAGTGTAGCGTCTTGTTCAGGAGCTaGATACAGATGCAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: NLPGSSSRTGGFSGSQCSVLFRS*IQMQKN
Trigger: GTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGAC...GCTACACTGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTTGAGTCATACAAGATaGAGAAAGCGAGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHLSHTR*RKRVQA
Trigger: TGCTTGAACTCGCTTTCTCCATCTTGTATGACTCAA...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR TCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTCGAGATGTCTATGGCTaGCTTGTTCACAAAACTTGC +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSRDVYG*LVHKTC
Trigger: GCAAGTTTTGTGAACAAGTCAGCCATAGACATCTCG...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp GCTAAACATCTGGAAATGTGGAAACTATTCCGTAAAGCGCAAGAGGACCACACGAGAACATACAGCTGGTaGGCCATCTCATTGTTGATG +
Preference number: 4 (lower is better)
Translates to: AKHLEMWKLFRKAQEDHTRTYSW*AISLLM
Trigger: CATCAACAATGAGATGGCGCACCAGCTGTATGTTCT...CGTGTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACATTTCCAGATGTTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR GCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGAGCTGGATACAGATaGAGAAAAACTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSGAGYR*RKTPQR
Trigger: CCTTTGAGGAGTTTTTCTGCATCTGTATCCAGCTCC...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTTGCTCCTTCACCACCTaGATTACCTTGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSCSFTT*ITLLKS
Trigger: AGACTTCAACAAGGTAATGCAGGTGGTGAAGGAGCA...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp CATTTCCTTCCATGTCTTGTTCAGGAGCTGGATACAGATGCAGAAAAACTCCTCAGTGCTCTCATAACCTaGTCCTTCACCACCTGCATT +
Preference number: 4 (lower is better)
Translates to: HFLPCLVQELDTDAEKLLSALIT*SFTTCI
Trigger: AATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACT...GAGGAGTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGACATGGAAGGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR GCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTCAGATACAGTACTCATaGTTGTCAGGAGCGATGAAG +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSQIQYS*LSGAMK
Trigger: CTTCATCGCTCCTGACAAGCATGAGTACTGTATCTG...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR GCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCAGGTCTGTGGGTATaGATTCTTTTCATTGCTAAA +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHSGLWV*ILFIAK
Trigger: TTTAGCAATGAAAAGAATGCATACCCACAGACCTGA...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp TTCCATGTCTTGTTCAGGAGCTGGATACAGATGCAGAAAAACTCCTCAAAGGATAGTTTGCTCTTGAACTaGTCCAGGGAGCTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FHVLFRSWIQMQKNSSKDSLLLN*SRELGL
Trigger: CAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACT...ATCCTTTGAGGAGTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGACATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR TCA 90 bp CTGGAAATGTGGAAACTATTCCGTAAAGCGCAAGAGGACCACACGCTCGGAAGAGTTATTCCATTTCACTaGAGCCAGAAGAGATTTTCA +
Preference number: 4 (lower is better)
Translates to: LEMWKLFRKAQEDHTLGRVIPFH*SQKRFS
Trigger: TGAAAATCTCTTCTGGCTTCAGTGAAATGGAATAAC...TCTTCCGAGCGTGTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACATTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR GCA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGTCTGGTATCGCTCAGTaGCGCTCTCCACCATCTGCG +
Preference number: 4 (lower is better)
Translates to: PFYSTACLRECYFQEDVWSGIAQ*RSPPSA
Trigger: CGCAGATGGTGGAGAGCGGCACTGAGCGATACCAGA...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp AGAGAGAAGGTGAGGTGGCCAAATATGGGCAACAATCCTTCCCCACATGGTCACCTTGTTCACAAAACTTaGTATCTTCTTAATGAACGC +
Preference number: 4 (lower is better)
Translates to: REKVRWPNMGNNPSPHGHLVHKT*YLLNER
Trigger: GCGTTCATTAAGAAGATAGCAAGTTTTGTGAACAAG...GTGACCATGTGGGGAAGGATTGTTGCCCATATTTGGCCACCTCACCTTCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCCTTGTTCACAAAACTTaGTATCTTCTTAATGAACGC +
Preference number: 4 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSLVHKT*YLLNER
Trigger: GCGTTCATTAAGAAGATAGCAAGTTTTGTGAACAAG...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATAAGCGCATTAATCACTaGAATAGTATAGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHKRINH*NSIGLD
Trigger: ATCCAAACCTATACTATTGCAGTGATTAATGCGCTT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR GCA 90 bp CATTTCCTTCCATGTCTTGTTCAGGAGCTGGATACAGATGCAGAAAAACTCCTCAGGCTTGGTTGTAAGTaGTCTCATAACCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: HFLPCLVQELDTDAEKLLRLGCK*SHNLLL
Trigger: AAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCT...GAGGAGTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGACATGGAAGGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR GCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTAAGTGTAACTGGTGGTaGGAGATGATTCTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSKCNWW*EMILER
Trigger: TCTCTCTAGAATCATCTCGCACCACCAGTTACACTT...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR GCA 90 bp CTTCTGACATCCCTCCCAGTGCTGGGAGTTTACAATCCTGATAATGCCTCCAGTTTTCTTTCTATTAAATaGACCAAAGCTGGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LLTSLPVLGVYNPDNASSFLSIK*TKAGVP
Trigger: TGGCACTCCAGCTTTGGTGCATTTAATAGAAAGAAA...ACTGGAGGCATTATCAGGATTGTAAACTCCCAGCACTGGGAGGGATGTCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp GACTTAAGAAACATCCTTCGCTGGGCTCTGACCTATAATTTATTAACCCACGGTAGGTTTATAAACTCCTaGGCAAACGTGACATCCCGG +
Preference number: 4 (lower is better)
Translates to: DLRNILRWALTYNLLTHGRFINS*ANVTSR
Trigger: CCGGGATGTCACGTTTGCCCAGGAGTTTATAAACCT...ACCGTGGGTTAATAAATTATAGGTCAGAGCCCAGCGAAGGATGTTTCTTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp GACTTAAGAAACATCCTTCGCTGGGCTCTGACCTATAATTTATTAACCCACGGTAATCTCGCGTGTACATaGACTTGCGTTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: DLRNILRWALTYNLLTHGNLACT*TCVSPC
Trigger: GCATGGAGAAACGCAAGTCCATGTACACGCGAGATT...ACCGTGGGTTAATAAATTATAGGTCAGAGCCCAGCGAAGGATGTTTCTTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp TTCCATGTCTTGTTCAGGAGCTGGATACAGATGCAGAAAAACTCCTCAAAGGATAAAATCGGGCGGGACTaGAAATCTTCCTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: FHVLFRSWIQMQKNSSKDKIGRD*KSSWFI
Trigger: GATGAACCAGGAAGATTTCCAGTCCCGCCCGATTTT...ATCCTTTGAGGAGTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGACATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CCA 90 bp TTATTCCATTTCACTGAAGCCAGAAGAGATTTTCATGTGATCCTGTTTAAACCAGAGACATCAGTTATGTaGCTGAGGTCAGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LFHFTEARRDFHVILFKPETSVM*LRSGPG
Trigger: CCCCGGGCCTGACCTCAGCCACATAACTGATGTCTC...TGGTTTAAACAGGATCACATGAAAATCTCTTCTGGCTTCAGTGAAATGGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR TCA 90 bp GACTTAAGAAACATCCTTCGCTGGGCTCTGACCTATAATTTATTAACCCACGGTAAGGAATTAACAGCTTaGCACAGGTGTGAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: DLRNILRWALTYNLLTHGKELTA*HRCECS
Trigger: AGAGCACTCACACCTGTGTCAAGCTGTTAATTCCTT...ACCGTGGGTTAATAAATTATAGGTCAGAGCCCAGCGAAGGATGTTTCTTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp TTGTGCAAGTTATTCCATTTCACTGAAGCCAGAAGAGATTTTCATGTGATCCTGGAACGCAGTTGCTTCTaGGCCAAAATATTCGCCATC +
Preference number: 4 (lower is better)
Translates to: LCKLFHFTEARRDFHVILERSCF*AKIFAI
Trigger: GATGGCGAATATTTTGGCTCAGAAGCAACTGCGTTC...CAGGATCACATGAAAATCTCTTCTGGCTTCAGTGAAATGGAATAACTTGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR TCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTTTTGTTTGCTGCCTTTaGCCTAACACTTACTGTTTT +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSFVCCL*PNTYCF
Trigger: AAAACAGTAAGTGTTAGGTCAAAGGCAGCAAACAAA...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp AAACATCTGGAAATGTGGAAACTATTCCGTAAAGCGCAAGAGGACCACACGCTCGAAGAGATTTTCATGTaGTCCTGTTTAAACCAGCTA +
Preference number: 4 (lower is better)
Translates to: KHLEMWKLFRKAQEDHTLEEIFM*SCLNQL
Trigger: TAGCTGGTTTAAACAGGATCACATGAAAATCTCTTC...GAGCGTGTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACATTTCCAGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR GCA 90 bp CCAATGTACATAAACATCACCCAATTCAGCAGGTCTAGGGTGGAGCTGAAGAGCAAGCGCATTAATCACTaGAATAGTATAGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: PMYINITQFSRSRVELKSKRINH*NSIGLD
Trigger: ATCCAAACCTATACTATTGCAGTGATTAATGCGCTT...GCTCTTCAGCTCCACCCTAGACCTGCTGAATTGGGTGATGTTTATGTACATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp CCAGCTAAACATCTGGAAATGTGGAAACTATTCCGTAAAGCGCAAGAGGACCACAAACATCTGGAAATGTaGAAACTATTCCGTAAAGCG +
Preference number: 4 (lower is better)
Translates to: PAKHLEMWKLFRKAQEDHKHLEM*KLFRKA
Trigger: CGCTTTACGGAATAGTTTCCACATTTCCAGATGTTT...GTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACATTTCCAGATGTTTAGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR GCA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGTGGATTTGGCTGAGTTaGCCAGGCTTAGGAAACTGC +
Preference number: 4 (lower is better)
Translates to: PFYSTACLRECYFQEDVWWIWLS*PGLGNC
Trigger: GCAGTTTCCTAAGCCTGGGCAACTCAGCCAAATCCA...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CCA 90 bp CACTTGTGCAAGTTATTCCATTTCACTGAAGCCAGAAGAGATTTTCATGTGATCTGTAGAACATACAGCTaGTGCGCCATCTCATTGTTG +
Preference number: 4 (lower is better)
Translates to: HLCKLFHFTEARRDFHVICRTYS*CAISLL
Trigger: CAACAATGAGATGGCGCACCAGCTGTATGTTCTACA...GATCACATGAAAATCTCTTCTGGCTTCAGTGAAATGGAATAACTTGCACAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR CCA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTCTTATTTCAGGTCTGTaGGTATGCATTCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSLISGL*VCILFI
Trigger: AATGAAAAGAATGCATACCCACAGACCTGAAATAAG...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGAGGCTTGGTTGTAAGTaGTCTCATAACCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PFYSTACLRECYFQEDVWRLGCK*SHNLLL
Trigger: AAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCT...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000396045.7
CDS-3UTR GCA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGTTTTCCTGCAATGCATaGAGTGCTCTGGACCATATC +
Preference number: 4 (lower is better)
Translates to: PFYSTACLRECYFQEDVWFSCNA*SALDHI
Trigger: GATATGGTCCAGAGCACTGCATGCATTGCAGGAAAA...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR TCA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGATGGAGCGAGACTACTaGTTTCACCATTTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: PFYSTACLRECYFQEDVWMERDY*FHHLCF
Trigger: AAAGCACAAATGGTGAAATCAGTAGTCTCGCTCCAT...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000396045.7
CDS-3UTR GCA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGAAGTGTAACTGGTGGTaGGAGATGATTCTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PFYSTACLRECYFQEDVWKCNWW*EMILER
Trigger: TCTCTCTAGAATCATCTCGCACCACCAGTTACACTT...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000396045.7
CDS-3UTR CCA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGGGATCGAGATGTCTATaGCTGACTTGTTCACAAAAC +
Preference number: 4 (lower is better)
Translates to: PFYSTACLRECYFQEDVWGSRCL*LTCSQN
Trigger: GTTTTGTGAACAAGTCAGCCATAGACATCTCGATCC...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR GCA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGTTTGAACTATCGGCATaGTGGAGTGCAAAATATTCA +
Preference number: 4 (lower is better)
Translates to: PFYSTACLRECYFQEDVWFELSA*WSAKYS
Trigger: TGAATATTTTGCACTCCAGCATGCCGATAGTTCAAA...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS GCA 90 bp GTTGCAGCCGCCGCCCCCGGCACCTGCGCCAGGACACTCGTGGTCTaGGCGTTCGCCTTGCGCCCGCACCCTGCCTGGTCCCTGCCCACT +
Preference number: 5 (lower is better)
Translates to: VAAAAPGTCARTLVV*AFALRPHPAWSLPT
Trigger: AGTGGGCAGGGACCAGGCAGGGTGCGGGCGCAAGGCGAACGCGCAGACCACGAGTGTCCTGGCGCAGGTGCCGGGGGCGGCGGCTGCAAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445322.1
ENST00000448602.5
CDS CCA 90 bp CCCGGCGATCAGAGCTCCGGCGACCCGCCACCATTGAAGGGGAACTaGAGGCTCTGTCGCCCAGCGTGGGGCCGCGGCGGCGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: PGDQSSGDPPPLKGN*RLCRPAWGRGGVGG
Trigger: GCCACCCACGCCGCCGCGGCCCCACGCTGGGCGACAGAGCCTCCAGTTCCCCTTCAATGGTGGCGGGTCGCCGGAGCTCTGATCGCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000445322.1
ENST00000463390.1
CDS CCA 90 bp GAACTGGAGGCTCTGTCGCCCAGCGTGGGGCCGCGGCGGCGTGGGTaGCTCTGCCTCTATCCTGTGCCCATCCTCGCCCGCTCCCGCTCG +
Preference number: 5 (lower is better)
Translates to: ELEALSPSVGPRRRG*LCLYPVPILARSRS
Trigger: CGAGCGGGAGCGGGCGAGGATGGGCACAGGATAGAGGCAGAGCCACCCACGCCGCCGCGGCCCCACGCTGGGCGACAGAGCCTCCAGTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000445322.1
ENST00000463390.1
CDS TCA 90 bp CGGCAAGGGTTCCCGGCGATCAGAGCTCCGGCGACCCGCCACCATTaGAGGGGAACTGGAGGCTCTGTCGCCCAGCGTGGGGCCGCGGCG +
Preference number: 5 (lower is better)
Translates to: RQGFPAIRAPATRHH*RGTGGSVAQRGAAA
Trigger: CGCCGCGGCCCCACGCTGGGCGACAGAGCCTCCAGTTCCCCTTCAATGGTGGCGGGTCGCCGGAGCTCTGATCGCCGGGAACCCTTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000445322.1
ENST00000463390.1
CDS GCA 90 bp CGGAGATCAGCCGCGAACTCTCCTCCCGAGCGGACGCTGCGGAGTTaGAGCCGCCGCCCCCGGCACCTGCGCCAGGACACTCGTGGTCTG +
Preference number: 5 (lower is better)
Translates to: RRSAANSPPERTLRS*SRRPRHLRQDTRGL
Trigger: CAGACCACGAGTGTCCTGGCGCAGGTGCCGGGGGCGGCGGCTGCAACTCCGCAGCGTCCGCTCGGGAGGAGAGTTCGCGGCTGATCTCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445322.1
ENST00000448602.5
CDS CCA 90 bp CATCCTCGCCCGCTCCCGCTCGCCCCAGCACACGCACTTACACTCTaGGTCGGCCGGCTGCTGCACCGCCGGCTGCCGCTGCTCTCACTT +
Preference number: 5 (lower is better)
Translates to: HPRPLPLAPAHALTL*VGRLLHRRLPLLSL
Trigger: AAGTGAGAGCAGCGGCAGCCGGCGGTGCAGCAGCCGGCCGACCCAGAGTGTAAGTGCGTGTGCTGGGGCGAGCGGGAGCGGGCGAGGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445322.1
CDS-3UTR CAA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCCTCCAGACAGGGGCCTaGGGGCACTGCCCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSLQTGA*GHCPWS
Trigger: AGACCAAGGGCAGTGCCCCAAGGCCCCTGTCTGGAG...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGGGCGACCCGCCACCATaGAAGGGGAACTGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGGDPPP*KGNWRL
Trigger: GAGCCTCCAGTTCCCCTTCAATGGTGGCGGGTCGCC...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGTGCGCCATCTCATTGTaGATGGCCCGCTGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: SDSLTILWNLSCSRTSQECAISL*MARWAR
Trigger: CCGAGCCCAGCGGGCCATCAACAATGAGATGGCGCA...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGTGCCTCCGCCGGGCATaGAGTTTCCTAAAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARCLRRA*SFLKQV
Trigger: GACCTGCTTTAGGAAACTCAATGCCCGGCGGAGGCA...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGCCCGTCACCACGGCTTaGATATCTGCCACCGGCAGT +
Preference number: 5 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKPVTTA*ISATGS
Trigger: ACTGCCGGTGGCAGATATCAAAGCCGTGGTGACGGG...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCTCCAGGAGGCGGAGCTaGATTTCCATGCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSSRRRS*ISMLSR
Trigger: CCTGCTCAGCATGGAAATCAAGCTCCGCCTCCTGGA...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACTACTGGCAGTGGGCTTaGCTCTTGTCCCACCAGTGG +
Preference number: 5 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHYWQWA*LLSHQW
Trigger: CCACTGGTGGGACAAGAGCAAAGCCCACTGCCAGTA...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACCCTGTGGAACTTGAGTaGCAGCAGGACCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHPVELE*QQDLPG
Trigger: TCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGG...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS CCA 90 bp GTAGGCGCCCGGCCATTCTATGGCCACCTTGACGATGTCCGCGGGTaGCGGCATTGTAAGTCCCCAAAATGTTCAAAGCCAGTGGGAATG +
Preference number: 5 (lower is better)
Translates to: VGARPFYGHLDDVRG*RHCKSPKCSKPVGM
Trigger: CATTCCCACTGGCTTTGAACATTTTGGGGACTTACAATGCCGCCACCCGCGGACATCGTCAAGGTGGCCATAGAATGGCCGGGCGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000445322.1
ENST00000448602.5
ENST00000453399.5
ENST00000455119.5
ENST00000455879.5
ENST00000463390.1
CDS-3UTR CAA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCATCGGGTGGAAGTCGTaGCAGGTCTCACTAGGCAAC +
Preference number: 5 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSIGWKS*QVSLGN
Trigger: GTTGCCTAGTGAGACCTGCAACGACTTCCACCCGAT...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAATCTGCCACCGGCAGTTaGTCCTGCAAGGAATCGTGG +
Preference number: 5 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTESATGS*SCKESW
Trigger: CCACGATTCCTTGCAGGACAAACTGCCGGTGGCAGA...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACCTAGGTGTTCCAGTTTaGGAAGGGGCATGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHLGVPV*EGACLG
Trigger: GCCCAGACATGCCCCTTCCAAAACTGGAACACCTAG...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp TTTATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGCAGTGGGCTTTGCTCTaGTCCCACCAGTGGACTGCA +
Preference number: 5 (lower is better)
Translates to: FMLGRITRRLRLLLLGPKQWALL*SHQWTA
Trigger: TGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTG...CTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTCAGTGGGCTTTGCTCTaGTCCCACCAGTGGACTGCA +
Preference number: 5 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGQWALL*SHQWTA
Trigger: TGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTG...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCCTCCAGACAGGGGCCTaGGGGCACTGCCCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLLQTGA*GHCPWS
Trigger: AGACCAAGGGCAGTGCCCCAAGGCCCCTGTCTGGAG...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACACCATCCTGTGGAACTaGAGTTGCAGCAGGACCTCC +
Preference number: 5 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHTILWN*SCSRTS
Trigger: GGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGT...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp ATCGGGTGGAAGTCGTTGCAGGTCTCACTAGCTCCGAGACACACTGCAAGGCTGATCGGGTGGAAGTCGTaGCAGGTCTCACTAGCTCCG +
Preference number: 5 (lower is better)
Translates to: IGWKSLQVSLAPRHTARLIGWKS*QVSLAP
Trigger: CGGAGCTAGTGAGACCTGCAACGACTTCCACCCGAT...CAGCCTTGCAGTGTGTCTCGGAGCTAGTGAGACCTGCAACGACTTCCACCCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CAA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTTTCAGGGCTTCCAGCTaGGCATCCATACTCGAGGAC +
Preference number: 5 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGFRASS*ASILED
Trigger: GTCCTCGAGTATGGATGCCAAGCTGGAAGCCCTGAA...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGTGCGCCATCTCATaGTTGATGGCCCGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNAWCAIS*LMARWA
Trigger: AGCCCAGCGGGCCATCAACAATGAGATGGCGCACCA...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp CGGGACTGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCTGGTGCGCCATCTCATaGTTGATGGCCCGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RDWKSSWFILSDWRIFRIWCAIS*LMARWA
Trigger: AGCCCAGCGGGCCATCAACAATGAGATGGCGCACCA...GATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CAA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCTCTGCCACCGGCAGTTaGTCCTGCAAGGAATCGTGG +
Preference number: 5 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSSATGS*SCKESW
Trigger: CCACGATTCCTTGCAGGACAAACTGCCGGTGGCAGA...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGCCCGTCACCACGGCTTaGATATCTGCCACCGGCAGT +
Preference number: 5 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGPVTTA*ISATGS
Trigger: ACTGCCGGTGGCAGATATCAAAGCCGTGGTGACGGG...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGCAGTGGGCTTTGCTCTaGTCCCACCAGTGGACTGCA +
Preference number: 5 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEQWALL*SHQWTA
Trigger: TGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTG...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGTACTGGCAGTGGGCTTaGCTCTTGTCCCACCAGTGG +
Preference number: 5 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEYWQWA*LLSHQW
Trigger: CCACTGGTGGGACAAGAGCAAAGCCCACTGCCAGTA...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGCTGGTGGGCAAGTTTTaGGGCAGTCTGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGLVGKF*GSLGLL
Trigger: CAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCAG...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCTCCAGACAGGGGCCTaGGGGCACTGCCCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLLQTGA*GHCPWS
Trigger: AGACCAAGGGCAGTGCCCCAAGGCCCCTGTCTGGAG...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCCTGCGGCTGCTGCTCTaGGGACCAAAGAGGAACAGA +
Preference number: 5 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSLRLLL*GPKRNR
Trigger: TCTGTTCCTCTTTGGTCCCAAGAGCAGCAGCCGCAG...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGGGTAACACCAAACGCTaGGATAGCAACAGTCCGTCC +
Preference number: 5 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARGNTKR*DSNSPS
Trigger: GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACC...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp TGGCAGTGGGCTTTGCTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACAATCCTGCTCGGTGCTaGGGTTGCATCTTGCCACAT +
Preference number: 5 (lower is better)
Translates to: WQWALLLSHQWTAAMGSDNPARC*GCILPH
Trigger: ATGTGGCAAGATGCAACCCAAGCACCGAGCAGGATT...GTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396040.6
CDS TCA 90 bp TCCTTTATGAGGTGGGGCTTAGAGAGGCTCAATGAGTGTCCAAGGTaGCAGCACCGCCTGCCTCCTCGCCCGCCACCAAAACTGTGTTAT +
Preference number: 5 (lower is better)
Translates to: SFMRWGLERLNECPR*QHRLPPRPPPKLCY
Trigger: ATAACACAGTTTTGGTGGCGGGCGAGGAGGCAGGCGGTGCTGTCACCTTGGACACTCATTGAGCCTCTCTAAGCCCCACCTCATAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497024.1
CDS CCA 90 bp ACCATCTGCGTGAGGAGAGAGATACCGTCCAGGTTTATAAACTCCTaGGCAAACGTGACATCCCGGGAGAGGCTGGCCAAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: TICVRREIPSRFINS*ANVTSRERLAKSFR
Trigger: CCTGAAGGACTTGGCCAGCCTCTCCCGGGATGTCACGTTTGCCCAGGAGTTTATAAACCTGGACGGTATCTCTCTCCTCACGCAGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
ENST00000455119.5
ENST00000455879.5
CDS CCA 90 bp GAAGGGCCTTGGGCATATCTTGATCTGTATCTTCTCTGCCTTGTATaGTATAAGTGCTCCCTGCTCTGCCCCACTCTGGGTCGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: EGPWAYLDLYLLCLV*YKCSLLCPTLGRPA
Trigger: AGCCGGCCGACCCAGAGTGGGGCAGAGCAGGGAGCACTTATACCATACAAGGCAGAGAAGATACAGATCAAGATATGCCCAAGGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453399.5
CDS CCA 90 bp CTACATGCCAGGCAGTGGGCAGAGCACAGAGGATGCACAGATGACTaGCTACAGTACCATCACTATGTTCAGGTGCTCTCAGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: LHARQWAEHRGCTDD*LQYHHYVQVLSGQQ
Trigger: CTGCTGGCCTGAGAGCACCTGAACATAGTGATGGTACTGTAGCCAGTCATCTGTGCATCCTCTGTGCTCTGCCCACTGCCTGGCATGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS-3UTR CAA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAACATTCTATGGCCACCTaGACGATGTCCGCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQHSMAT*TMSAGG
Trigger: GCCACCCGCGGACATCGTCAAGGTGGCCATAGAATG...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp AATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCTCAGTGTAGCTGCGCCATCTCATTGTaGATGGCCCGCTGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: NLPGSSSRTGGFSGSQCSCAISL*MARWAR
Trigger: CCGAGCCCAGCGGGCCATCAACAATGAGATGGCGCA...GCTACACTGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CAA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCTCCAGGGAGCTAGGCTaGGTTGTAAGTGCTCTCATA +
Preference number: 5 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSSRELG*VVSALI
Trigger: TATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGA...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTTGCCTCCGCCGGGCATaGAGTTTCCTAAAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFCLRRA*SFLKQV
Trigger: GACCTGCTTTAGGAAACTCAATGCCCGGCGGAGGCA...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAAATACCAAAACTTGTCTaGCCTCCGCCGGGCATTGAG +
Preference number: 5 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTEIPKLV*PPPGIE
Trigger: CTCAATGCCCGGCGGAGGCAAGACAAGTTTTGGTAT...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCGCAGGACTTTGTGATTaGGCGAAAGCCGACAATACC +
Preference number: 5 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSAGLCD*AKADNT
Trigger: GGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTGC...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTGCAGGACTTTGTGATTaGGCGAAAGCCGACAATACC +
Preference number: 5 (lower is better)
Translates to: GRACLQRARMEGPFGLLTAGLCD*AKADNT
Trigger: GGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTGC...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp GCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGCTGGAGATCTGCCACCGGCAGTTaGTCCTGCAAGGAATCGTGG +
Preference number: 5 (lower is better)
Translates to: AYSSDLTGPKEGLGRSWRSATGS*SCKESW
Trigger: CCACGATTCCTTGCAGGACAAACTGCCGGTGGCAGA...TCTCCAGCTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCCCCGTCACCACGGCTTaGATATCTGCCACCGGCAGT +
Preference number: 5 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSPVTTA*ISATGS
Trigger: ACTGCCGGTGGCAGATATCAAAGCCGTGGTGACGGG...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp ATGCTAGGGAGGATCACGAGGAGGCTGCGGCTGCTGCTCTTGGGACCAAAGAGGGAGGTGGGAGGAGATTaGAGCGCAGATCTTAATTCA +
Preference number: 5 (lower is better)
Translates to: MLGRITRRLRLLLLGPKREVGGD*SADLNS
Trigger: TGAATTAAGATCTGCGCTCAAATCTCCTCCCACCTC...CCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCACTGCGGCTGCTGCTCTaGGGACCAAAGAGGAACAGA +
Preference number: 5 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSLRLLL*GPKRNR
Trigger: TCTGTTCCTCTTTGGTCCCAAGAGCAGCAGCCGCAG...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp TGGCAGTGGGCTTTGCTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACGTGAGGAGGGAAGATTaGTCACGATCACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: WQWALLLSHQWTAAMGSDVRRED*SRSQCR
Trigger: TCTGCACTGTGATCGTGACAAATCTTCCCTCCTCAC...GTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTGGATGCTTCCACAGCTaGTGCTGTGAGGCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFGCFHS*CCEARV
Trigger: CACTCTGGCCTCACAGCACAAGCTGTGGAAGCATCC...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTTGCTCGGTGCTTGGGTaGCATCTTGCCACATACATT +
Preference number: 5 (lower is better)
Translates to: GRACLQRARMEGPFGLLTCSVLG*HLATYI
Trigger: AATGTATGTGGCAAGATGCAACCCAAGCACCGAGCA...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396040.6
CDS-3UTR CAA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCCTGCCAATGGTCCATTaGCGGCACCTGCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSLPMVH*RHLLVA
Trigger: TGCCACCAGCAGGTGCCGCAAATGGACCATTGGCAG...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS TCA 90 bp TGTTTCTTCCTCCCGGTGGGTTCGTGGTCTCGCTGGCTTCAAGAGTaGATAGCGAAGCTGCAAACCTTCGCGGTGAGTGCTACAGCTCAT +
Preference number: 5 (lower is better)
Translates to: CFFLPVGSWSRWLQE*IAKLQTFAVSATAH
Trigger: ATGAGCTGTAGCACTCACCGCGAAGGTTTGCAGCTTCGCTATTCACTCTTGAAGCCAGCGAGACCACGAACCCACCGGGAGGAAGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS GCA 90 bp CTTCAGTTTCACCACTCTCCCATCTGGTCAGCTCTGAAAATCCCCTaGTGGGCATATTCTACATGCCAGGCAGTGGGCAGAGCACAGAGG +
Preference number: 5 (lower is better)
Translates to: LQFHHSPIWSALKIP*WAYSTCQAVGRAQR
Trigger: CCTCTGTGCTCTGCCCACTGCCTGGCATGTAGAATATGCCCAGCAGGGGATTTTCAGAGCTGACCAGATGGGAGAGTGGTGAAACTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS CCA 90 bp AGCTTTGCTTATGTTTATGGAGCTGGAGCCCAGGGATGCTCCGATTaGCAGGAGTCGGGGAAAGATCAGCCAATCAAAGGGCGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: SFAYVYGAGAQGCSD*QESGKDQPIKGRLH
Trigger: ATGGAGGCGCCCTTTGATTGGCTGATCTTTCCCCGACTCCTGCCAATCGGAGCATCCCTGGGCTCCAGCTCCATAAACATAAGCAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS CCA 90 bp GAAGGGCCTTGGGCATATCTTGATCTGTATCTTCTCTGCCTTGTATaGTATAAGTGCTCCCTGCTCTGCCCCCTGCTTGGGGTCGCAGGA +
Preference number: 5 (lower is better)
Translates to: EGPWAYLDLYLLCLV*YKCSLLCPLLGVAG
Trigger: TCCTGCGACCCCAAGCAGGGGGCAGAGCAGGGAGCACTTATACCATACAAGGCAGAGAAGATACAGATCAAGATATGCCCAAGGCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445322.1
CDS CCA 90 bp CAGTTTCACCACTCTCCCATCTGGTCAGCTCTGAAAATCCCCTGCTaGGCATATTCTACATGCCAGGCAGTGGGCAGAGCACAGAGGATG +
Preference number: 5 (lower is better)
Translates to: QFHHSPIWSALKIPC*AYSTCQAVGRAQRM
Trigger: CATCCTCTGTGCTCTGCCCACTGCCTGGCATGTAGAATATGCCCAGCAGGGGATTTTCAGAGCTGACCAGATGGGAGAGTGGTGAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS-3UTR CAA 90 bp TGGAAATGTGGAAACTATTCCGTAAAGCGCAAGAGGACCACACGCTCGGAAGAGTGGTGCGCCATCTCATaGTTGATGGCCCGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: WKCGNYSVKRKRTTRSEEWCAIS*LMARWA
Trigger: AGCCCAGCGGGCCATCAACAATGAGATGGCGCACCA...CTCTTCCGAGCGTGTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACATTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR CAA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCACGCGTGTACATGGACTaGCGTTTCTCCATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSRVYMD*RFSMLP
Trigger: TGGCAGCATGGAGAAACGCAAGTCCATGTACACGCG...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAAGCATCTTGGTGGTGCTaGGCAAAGTACAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTEASWWC*AKYSML
Trigger: CAACATGCTGTACTTTGCCAAGCACCACCAAGATGC...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp ATCGGGTGGAAGTCGTTGCAGGTCTCACTAGCTCCGAGACACACTGCAAGGCTGTCCAGGGAGCTAGGCTaGGTTGTAAGTGCTCTCATA +
Preference number: 5 (lower is better)
Translates to: IGWKSLQVSLAPRHTARLSRELG*VVSALI
Trigger: TATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGA...CAGCCTTGCAGTGTGTCTCGGAGCTAGTGAGACCTGCAACGACTTCCACCCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CAA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTGCCTCCGCCGGGCATaGAGTTTCCTAAAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSCLRRA*SFLKQV
Trigger: GACCTGCTTTAGGAAACTCAATGCCCGGCGGAGGCA...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTGCCTCCGCCGGGCATaGAGTTTCCTAAAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHCLRRA*SFLKQV
Trigger: GACCTGCTTTAGGAAACTCAATGCCCGGCGGAGGCA...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCTCCAGGAGGCGGAGCTaGATTTCCATGCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSSRRRS*ISMLSR
Trigger: CCTGCTCAGCATGGAAATCAAGCTCCGCCTCCTGGA...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCCAGGAGGCGGAGCTaGATTTCCATGCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSSRRRS*ISMLSR
Trigger: CCTGCTCAGCATGGAAATCAAGCTCCGCCTCCTGGA...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCGGATGGAAGGGCCCTTaGGCCTTCTTACTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSGWKGP*AFLLAV
Trigger: CACTGCCAGTAAGAAGGCCAAAGGGCCCTTCCATCC...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp GATGCTGAAGGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGATGGAAGGGCCCTTaGGCCTTCTTACTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: DAEGNVDPQLPFTKGRFQGWKGP*AFLLAV
Trigger: CACTGCCAGTAAGAAGGCCAAAGGGCCCTTCCATCC...TTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCCTGCGGCTGCTGCTCTaGGGACCAAAGAGGAACAGA +
Preference number: 5 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSLRLLL*GPKRNR
Trigger: TCTGTTCCTCTTTGGTCCCAAGAGCAGCAGCCGCAG...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATCCTGTGGAACTTGAGTaGCAGCAGGACCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHPVELE*QQDLPG
Trigger: TCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGG...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCTTGGATTTGGCTGAGTaGCCCAGGCTTAGGAAACTG +
Preference number: 5 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGLDLAE*PRLRKL
Trigger: CAGTTTCCTAAGCCTGGGCAACTCAGCCAAATCCAA...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp CTCTTGTCCCACCAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCTCTTCATAAATGGCTaGCCATTTCCTGAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: LLSHQWTAAMGSDLKQWSLFING*PFPEPA
Trigger: AGCAGGCTCAGGAAATGGCAAGCCATTTATGAAGAG...GCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS GCA 90 bp GTGAAGGACAGCATGTCTCCAAAGTCAGTGCCGCTCTCCACCATCTaGGTGAGGAGAGAGATACCGTCCAGGTTTATAAACTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VKDSMSPKSVPLSTI*VRREIPSRFINSWA
Trigger: TGCCCAGGAGTTTATAAACCTGGACGGTATCTCTCTCCTCACGCAGATGGTGGAGAGCGGCACTGACTTTGGAGACATGCTGTCCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455119.5
CDS GCA 90 bp GCTGGGCATATTCTACATGCCAGGCAGTGGGCAGAGCACAGAGGATaGACAGATGACTGGCTACAGTACCATCACTATGTTCAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: AGHILHARQWAEHRG*TDDWLQYHHYVQVL
Trigger: GAGCACCTGAACATAGTGATGGTACTGTAGCCAGTCATCTGTGCATCCTCTGTGCTCTGCCCACTGCCTGGCATGTAGAATATGCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS GCA 90 bp CACATTGACCATGGCATAGGGCCAGCTTGTCTAGCCAAGCGGAGCTaGAATGAGGCTGATGGAAGGAGGAACCATGCTCTTCAAGGTTCA +
Preference number: 5 (lower is better)
Translates to: HIDHGIGPACLAKRS*NEADGRRNHALQGS
Trigger: TGAACCTTGAAGAGCATGGTTCCTCCTTCCATCAGCCTCATTGCAGCTCCGCTTGGCTAGACAAGCTGGCCCTATGCCATGGTCAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497024.1
CDS CCA 90 bp CAGAGTTTGTTCCTTCAGATGTTCAGATGCGTCCGGAGTTTCTTCTaGGGGGTTCGTGGTCTCCCTGACTTCAGGAGTGATACCGCAGAC +
Preference number: 5 (lower is better)
Translates to: QSLFLQMFRCVRSFF*GVRGLPDFRSDTAD
Trigger: GTCTGCGGTATCACTCCTGAAGTCAGGGAGACCACGAACCCCCCAGAAGAAACTCCGGACGCATCTGAACATCTGAAGGAACAAACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS-3UTR CAA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTTGCGCCATCTCATTGTaGATGGCCCGCTGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSCAISL*MARWAR
Trigger: CCGAGCCCAGCGGGCCATCAACAATGAGATGGCGCA...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp CGGGACTGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCCCGGATGTAGGCATCTaGGTGGTGCTTGGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: RDWKSSWFILSDWRIFRIPDVGI*VVLGKV
Trigger: TACTTTGCCAAGCACCACCAAGATGCCTACATCCGG...GATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CAA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCATCGGGTGGAAGTCGTaGCAGGTCTCACTAGGCAAC +
Preference number: 5 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSIGWKS*QVSLGN
Trigger: GTTGCCTAGTGAGACCTGCAACGACTTCCACCCGAT...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTATACCAAAACTTGTCTaGCCTCCGCCGGGCATTGAG +
Preference number: 5 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNAIPKLV*PPPGIE
Trigger: CTCAATGCCCGGCGGAGGCAAGACAAGTTTTGGTAT...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTATACCAAAACTTGTCTaGCCTCCGCCGGGCATTGAG +
Preference number: 5 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFIPKLV*PPPGIE
Trigger: CTCAATGCCCGGCGGAGGCAAGACAAGTTTTGGTAT...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCAATACCAAAACTTGTCTaGCCTCCGCCGGGCATTGAG +
Preference number: 5 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSIPKLV*PPPGIE
Trigger: CTCAATGCCCGGCGGAGGCAAGACAAGTTTTGGTAT...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTTCTGCCACCGGCAGTTaGTCCTGCAAGGAATCGTGG +
Preference number: 5 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSSATGS*SCKESW
Trigger: CCACGATTCCTTGCAGGACAAACTGCCGGTGGCAGA...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTAAGCACCTCCTTGTTTaGTTTAAGGGCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: GRACLQRARMEGPFGLLTKHLLV*FKGTFL
Trigger: GAGAAAGGTGCCCTTAAACAAAACAAGGAGGTGCTT...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTAGTTCAAGCACCTCCTaGTTTTGTTTAAGGGCACCT +
Preference number: 5 (lower is better)
Translates to: GRACLQRARMEGPFGLLTSSSTS*FCLRAP
Trigger: AGGTGCCCTTAAACAAAACAAGGAGGTGCTTGAACT...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp GGAAGGGCATGCCTGCAGAGGGCTAGGATGGAAGGGCCCTTTGGCCTTCTTACTATACAGTACTCATGCTaGTCAGGAGCGATGAAGTTC +
Preference number: 5 (lower is better)
Translates to: GRACLQRARMEGPFGLLTIQYSC*SGAMKF
Trigger: GAACTTCATCGCTCCTGACAAGCATGAGTACTGTAT...AGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCCACATACAGTACTCATGCTaGTCAGGAGCGATGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LLLARCSSFGRGMSGPGHIQYSC*SGAMKF
Trigger: GAACTTCATCGCTCCTGACAAGCATGAGTACTGTAT...GTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCCTAGGTGTTCCAGTTTaGGAAGGGGCATGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLLGVPV*EGACLG
Trigger: GCCCAGACATGCCCCTTCCAAAACTGGAACACCTAG...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTTACTGGCAGTGGGCTTaGCTCTTGTCCCACCAGTGG +
Preference number: 5 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSYWQWA*LLSHQW
Trigger: CCACTGGTGGGACAAGAGCAAAGCCCACTGCCAGTA...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCTTGGGGCACTGCCCTaGGTCTGGTGGGCAAGTTTT +
Preference number: 5 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSLGALP*VWWASF
Trigger: AAAACTTGCCCACCAGACCAAGGGCAGTGCCCCAAG...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCGAGGTGGGAGGAGATTaGAGCGCAGATCTTAATTCA +
Preference number: 5 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGEVGGD*SADLNS
Trigger: TGAATTAAGATCTGCGCTCAAATCTCCTCCCACCTC...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGGTAACACCAAACGCTGGTAACACCAAACGCTaGGATAGCAACAGTCCGTCC +
Preference number: 5 (lower is better)
Translates to: LWNLSCSRTSQEKVTPNAGNTKR*DSNSPS
Trigger: GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACC...AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTCTTAATACTGCATGCTaGGACCCTTCTGACATCCCT +
Preference number: 5 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGLNTAC*DPSDIP
Trigger: AGGGATGTCAGAAGGGTCCAAGCATGCAGTATTAAG...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS TCA 90 bp AAAGGGCTGATCTTCAGTTTCACCACTCTCCCATCTGGTCAGCTCTaGAAATCCCCTGCTGGGCATATTCTACATGCCAGGCAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: KGLIFSFTTLPSGQL*KSPAGHILHARQWA
Trigger: TGCCCACTGCCTGGCATGTAGAATATGCCCAGCAGGGGATTTTCAGAGCTGACCAGATGGGAGAGTGGTGAAACTGAAGATCAGCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS GCA 90 bp CAGTTTGCTCTTGAACTGGTCCAGGGAGCTAGGCTTGGTTGTAAGTaGTCTCATAACCTGCTCCTTCACCACCTGCATTACCAAGCTCCC +
Preference number: 5 (lower is better)
Translates to: QFALELVQGARLGCK*SHNLLLHHLHYQAP
Trigger: GGGAGCTTGGTAATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396045.7
ENST00000464262.6
CDS GCA 90 bp GCTGAACTAGAAGGGCCTTGGGCATATCTTGATCTGTATCTTCTCTaGCTTGTATGGTATAAGTGCTCCCTGCTCTGCCCCCTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: AELEGPWAYLDLYLL*LVWYKCSLLCPLLG
Trigger: CCCAAGCAGGGGGCAGAGCAGGGAGCACTTATACCATACAAGGCAGAGAAGATACAGATCAAGATATGCCCAAGGCCCTTCTAGTTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445322.1
CDS-3UTR CAA 90 bp CTTCTGACATCCCTCCCAGTGCTGGGAGTTTACAATCCTGATAATGCCTCCAGTTTCAGGGCTTCCAGCTaGGCATCCATACTCGAGGAC +
Preference number: 5 (lower is better)
Translates to: LLTSLPVLGVYNPDNASSFRASS*ASILED
Trigger: GTCCTCGAGTATGGATGCCAAGCTGGAAGCCCTGAA...ACTGGAGGCATTATCAGGATTGTAAACTCCCAGCACTGGGAGGGATGTCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTTGGTGCGCCATCTCATaGTTGATGGCCCGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSWCAIS*LMARWA
Trigger: AGCCCAGCGGGCCATCAACAATGAGATGGCGCACCA...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp TGGAAATGTGGAAACTATTCCGTAAAGCGCAAGAGGACCACACGCTCGGAAGAGCGCGTGTACATGGACTaGCGTTTCTCCATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: WKCGNYSVKRKRTTRSEERVYMD*RFSMLP
Trigger: TGGCAGCATGGAGAAACGCAAGTCCATGTACACGCG...CTCTTCCGAGCGTGTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACATTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR CAA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATCCGGATGTAGGCATCTaGGTGGTGCTTGGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHPDVGI*VVLGKV
Trigger: TACTTTGCCAAGCACCACCAAGATGCCTACATCCGG...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCCCGGATGTAGGCATCTaGGTGGTGCTTGGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLPDVGI*VVLGKV
Trigger: TACTTTGCCAAGCACCACCAAGATGCCTACATCCGG...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTTCCAGGGAGCTAGGCTaGGTTGTAAGTGCTCTCATA +
Preference number: 5 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFSRELG*VVSALI
Trigger: TATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGA...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGTTCTGCAGTTTGCTCTaGAACTGGTCCAGGGAGCTA +
Preference number: 5 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGFCSLL*NWSREL
Trigger: TAGCTCCCTGGACCAGTTCAAGAGCAAACTGCAGAA...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp AATCGGGCGGGACTGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTTTCTGCAGTTTGCTCTaGAACTGGTCCAGGGAGCTA +
Preference number: 5 (lower is better)
Translates to: NRAGLEIFLVHPLGLADFFCSLL*NWSREL
Trigger: TAGCTCCCTGGACCAGTTCAAGAGCAAACTGCAGAA...AAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCGCCCGATT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CAA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGTTCAGGCGTTGCTGTTaGATCAGCTCTAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARFRRCC*ISSKIS
Trigger: AGAAATCTTAGAGCTGATCAAACAGCAACGCCTGAA...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTCCCGTCACCACGGCTTaGATATCTGCCACCGGCAGT +
Preference number: 5 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSPVTTA*ISATGS
Trigger: ACTGCCGGTGGCAGATATCAAAGCCGTGGTGACGGG...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAAAAGCACCTCCTTGTTTaGTTTAAGGGCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTEKHLLV*FKGTFL
Trigger: GAGAAAGGTGCCCTTAAACAAAACAAGGAGGTGCTT...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGAGTTCAGTTGGCAGTTaGAGTCATACAAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARSSVGS*SHTRWR
Trigger: TCTCCATCTTGTATGACTCAAACTGCCAACTGAACT...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTCTGGTGGGCAAGTTTTaGGGCAGTCTGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSLVGKF*GSLGLL
Trigger: CAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCAG...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTACCATCCTGTGGAACTaGAGTTGCAGCAGGACCTCC +
Preference number: 5 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSTILWN*SCSRTS
Trigger: GGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGT...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATACTTCTGCCTTGGATTaGGCTGAGTTGCCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHTSALD*AELPRL
Trigger: AAGCCTGGGCAACTCAGCCAAATCCAAGGCAGAAGT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS TCA 90 bp GGTGGCGGCATTGTAAGTCCCCAAAATGTTCAAAGCCAGTGGGAATaGGGATCCTACAGCGTAAACGGCCACACGTGTCTATACCTGCTT +
Preference number: 5 (lower is better)
Translates to: GGGIVSPQNVQSQWE*GSYSVNGHTCLYLL
Trigger: AAGCAGGTATAGACACGTGTGGCCGTTTACGCTGTAGGATCCTCATTCCCACTGGCTTTGAACATTTTGGGGACTTACAATGCCGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000463390.1
CDS TCA 90 bp GGTGGCGGCATTGTAAGTCCCCAAAATGTTCAAAGCCAGTGGGAATaGGGATCCTACAGCGTAAACGGCCACACGTGTCTATACCTACTC +
Preference number: 5 (lower is better)
Translates to: GGGIVSPQNVQSQWE*GSYSVNGHTCLYLL
Trigger: GAGTAGGTATAGACACGTGTGGCCGTTTACGCTGTAGGATCCTCATTCCCACTGGCTTTGAACATTTTGGGGACTTACAATGCCGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445322.1
ENST00000453399.5
CDS TCA 90 bp GGTGGCGGCATTGTAAGTCCCCAAAATGTTCAAAGCCAGTGGGAATaGGGATCCTACAGCGTAAACGGCCACACGTGTCTATACACTCTG +
Preference number: 5 (lower is better)
Translates to: GGGIVSPQNVQSQWE*GSYSVNGHTCLYTL
Trigger: CAGAGTGTATAGACACGTGTGGCCGTTTACGCTGTAGGATCCTCATTCCCACTGGCTTTGAACATTTTGGGGACTTACAATGCCGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448602.5
CDS GCA 90 bp ATCTTCTGCAATTTCTGGTATCGCTCAGTGCCGCTCTCCACCATCTaGGTGAGGAGAGAGATACCGTCCAGGTTTATAAACTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: IFCNFWYRSVPLSTI*VRREIPSRFINSWA
Trigger: TGCCCAGGAGTTTATAAACCTGGACGGTATCTCTCTCCTCACGCAGATGGTGGAGAGCGGCACTGAGCGATACCAGAAATTGCAGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
ENST00000455879.5
CDS GCA 90 bp GCTGAACTAGAAGGGCCTTGGGCATATCTTGATCTGTATCTTCTCTaGCTTGTATGGTATAAGTGCTCCCTGCTCTGCCCCACTCTGGGT +
Preference number: 5 (lower is better)
Translates to: AELEGPWAYLDLYLL*LVWYKCSLLCPTLG
Trigger: ACCCAGAGTGGGGCAGAGCAGGGAGCACTTATACCATACAAGGCAGAGAAGATACAGATCAAGATATGCCCAAGGCCCTTCTAGTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453399.5
CDS-3UTR CAA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATATGCTGCCACTGCTGTaGTTAGGTTCAGACTCAGCA +
Preference number: 5 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHMLPLL*LGSDSA
Trigger: TGCTGAGTCTGAACCTAACAACAGCAGTGGCAGCAT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAAATCTCACATAGCATCTaGGTCAGCTCTATACTACTG +
Preference number: 5 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTEISHSI*VSSILL
Trigger: CAGTAGTATAGAGCTGACCAAGATGCTATGTGAGAT...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp ATCGGGTGGAAGTCGTTGCAGGTCTCACTAGCTCCGAGACACACTGCAAGGCTGACCACCTGCATTACCTaGTTGAAGTCTTCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: IGWKSLQVSLAPRHTARLTTCIT*LKSSEV
Trigger: AACTTCTGAAGACTTCAACAAGGTAATGCAGGTGGT...CAGCCTTGCAGTGTGTCTCGGAGCTAGTGAGACCTGCAACGACTTCCACCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CAA 90 bp TCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTGGGCCCGGCACCACCTGCATTACCTaGTTGAAGTCTTCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: SLLLARCSSFGRGMSGPGTTCIT*LKSSEV
Trigger: AACTTCTGAAGACTTCAACAAGGTAATGCAGGTGGT...GCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCTCCAGGGAGCTAGGCTaGGTTGTAAGTGCTCTCATA +
Preference number: 5 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSSRELG*VVSALI
Trigger: TATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGA...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTTCTGCAGTTTGCTCTaGAACTGGTCCAGGGAGCTA +
Preference number: 5 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLFCSLL*NWSREL
Trigger: TAGCTCCCTGGACCAGTTCAAGAGCAAACTGCAGAA...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTTCTGCAGTTTGCTCTaGAACTGGTCCAGGGAGCTA +
Preference number: 5 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSFCSLL*NWSREL
Trigger: TAGCTCCCTGGACCAGTTCAAGAGCAAACTGCAGAA...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTTTCAGGCGTTGCTGTTaGATCAGCTCTAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGFRRCC*ISSKIS
Trigger: AGAAATCTTAGAGCTGATCAAACAGCAACGCCTGAA...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCGCAGGACTTTGTGATTaGGCGAAAGCCGACAATACC +
Preference number: 5 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSAGLCD*AKADNT
Trigger: GGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTGC...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCGCAGGACTTTGTGATTaGGCGAAAGCCGACAATACC +
Preference number: 5 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLAGLCD*AKADNT
Trigger: GGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTGC...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAAGCACCTCCTTGTTTaGTTTAAGGGCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: SDSLTILWNLSCSRTSQEKHLLV*FKGTFL
Trigger: GAGAAAGGTGCCCTTAAACAAAACAAGGAGGTGCTT...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATGTGAGGAGGGAAGATTaGTCACGATCACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHVRRED*SRSQCR
Trigger: TCTGCACTGTGATCGTGACAAATCTTCCCTCCTCAC...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGTACTTTACTTCTGCCTaGGATTTGGCTGAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGYFTSA*DLAELP
Trigger: GGGCAACTCAGCCAAATCCAAGGCAGAAGTAAAGTA...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCCCTGCTAAGGTCCTTTaGTGTCCAGAATTGGTGCGT +
Preference number: 5 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSPAKVL*CPELVR
Trigger: ACGCACCAATTCTGGACACAAAAGGACCTTAGCAGG...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS-3UTR CAA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGAAAGAACTAGAGAACTaGAGACCAACGTTTGCTATC +
Preference number: 5 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARKELEN*RPTFAI
Trigger: GATAGCAAACGTTGGTCTCAAGTTCTCTAGTTCTTT...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS TCA 90 bp TGGGCTCGGATGACATGTGTTAAAATGATGGAACGCAGTTGCTTCTaGGCCAAAATATTCGCCATCTCCTGCCTCCTCTCATCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: WARMTCVKMMERSCF*AKIFAISCLLSSGA
Trigger: GGCTCCTGATGAGAGGAGGCAGGAGATGGCGAATATTTTGGCTCAGAAGCAACTGCGTTCCATCATTTTAACACATGTCATCCGAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
ENST00000487336.1
CDS TCA 90 bp GATTCTAAGCTGCTGCCACCACAAAGCGACTTAGAGTCGTCCCCCTaGAGAACAATGTGCTGGAATACCACCAGATGGTTCCTGAGTAAG +
Preference number: 5 (lower is better)
Translates to: DSKLLPPQSDLESSP*RTMCWNTTRWFLSK
Trigger: CTTACTCAGGAACCATCTGGTGGTATTCCAGCACATTGTTCTTCAGGGGGACGACTCTAAGTCGCTTTGTGGTGGCAGCAGCTTAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396045.7
ENST00000464262.6
ENST00000487843.1
CDS TCA 90 bp GGTGGCGGCATTGTAAGTCCCCAAAATGTTCAAAGCCAGTGGGAATaGGGATCCTACAGCGTAAACGGCCACACGTGTCTATACCTTAAG +
Preference number: 5 (lower is better)
Translates to: GGGIVSPQNVQSQWE*GSYSVNGHTCLYLK
Trigger: CTTAAGGTATAGACACGTGTGGCCGTTTACGCTGTAGGATCCTCATTCCCACTGGCTTTGAACATTTTGGGGACTTACAATGCCGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS TCA 90 bp GGAAAATCGGCACATTTCATTTTGCAGTTGCAAATGGCTGCACATTaGCCATGGCATAGGGCCAGCTTGTCTAGCCAAGCGGAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: GKSAHFILQLQMAAH*PWHRASLSSQAELQ
Trigger: TTGCAGCTCCGCTTGGCTAGACAAGCTGGCCCTATGCCATGGTCAATGTGCAGCCATTTGCAACTGCAAAATGAAATGTGCCGATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497024.1
CDS GCA 90 bp CAGTTTGCTCTTGAACTGGTCCAGGGAGCTAGGCTTGGTTGTAAGTaGTCTCATAACCTGCTCCTTCACCACCTGCATTACCTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: QFALELVQGARLGCK*SHNLLLHHLHYLSS
Trigger: AGAGGAAAGGTAATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396040.6
CDS CCA 90 bp GCTTGCCATTTCCTGAGCCTGCTAAGGTCCTTTTGTGTCCAGAATTaGTGCGTTCTCGGTCTCACTGCCTTTAAGAATGAAGCAGCGAAC +
Preference number: 5 (lower is better)
Translates to: ACHFLSLLRSFCVQN*CVLGLTAFKNEAAN
Trigger: GTTCGCTGCTTCATTCTTAAAGGCAGTGAGACCGAGAACGCACCAATTCTGGACACAAAAGGACCTTAGCAGGCTCAGGAAATGGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS-3UTR CAA 90 bp GACTTAAGAAACATCCTTCGCTGGGCTCTGACCTATAATTTATTAACCCACGGTCGTGTCTATACCTGCTaGGGGTCGCAGGACAGCAGC +
Preference number: 5 (lower is better)
Translates to: DLRNILRWALTYNLLTHGRVYTC*GSQDSS
Trigger: GCTGCTGTCCTGCGACCCCAAGCAGGTATAGACACG...ACCGTGGGTTAATAAATTATAGGTCAGAGCCCAGCGAAGGATGTTTCTTAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCAGCAAAATATTCATGGTaGGCAAGAGACCACCCATCA +
Preference number: 5 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSAKYSW*ARDHPS
Trigger: TGATGGGTGGTCTCTTGCCAACCATGAATATTTTGC...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp CAGTGGACTGCAGCCATGGGAAGTGACCTGAAGCAGTGGAGCCGAGGAACAGAAAATGATGGAACGCAGTaGCTTCTGAGCCAAAATATT +
Preference number: 5 (lower is better)
Translates to: QWTAAMGSDLKQWSRGTENDGTQ*LLSQNI
Trigger: AATATTTTGGCTCAGAAGCAACTGCGTTCCATCATT...TTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCATGCTGCCACTGCTGTaGTTAGGTTCAGACTCAGCA +
Preference number: 5 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLMLPLL*LGSDSA
Trigger: TGCTGAGTCTGAACCTAACAACAGCAGTGGCAGCAT...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp AGCTGGATACAGATGCAGAAAAACTCCTCAAAGGATCTGTCGTGGGTGAAGAACCGCGTGTACATGGACTaGCGTTTCTCCATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SWIQMQKNSSKDLSWVKNRVYMD*RFSMLP
Trigger: TGGCAGCATGGAGAAACGCAAGTCCATGTACACGCG...GTTCTTCACCCACGACAGATCCTTTGAGGAGTTTTTCTGCATCTGTATCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CAA 90 bp TTGCTCTTGAACTGGTCCAGGGAGCTAGGCTTGGTTGTAAGTGCTCTCATAACCGCATCTTGGTGGTGCTaGGCAAAGTACAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: LLLNWSRELGLVVSALITASWWC*AKYSML
Trigger: CAACATGCTGTACTTTGCCAAGCACCACCAAGATGC...GGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CAA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTGCATCTTGGTGGTGCTaGGCAAAGTACAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSASWWC*AKYSML
Trigger: CAACATGCTGTACTTTGCCAAGCACCACCAAGATGC...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp CTAGCTGGTGAGGAGGGAAGATTTGTCACGATCACAGTGCAGACGCAAAGTGGGAAGGGACATTCATGCTaGTCTTCTCGACTACTGTTC +
Preference number: 5 (lower is better)
Translates to: LAGEEGRFVTITVQTQSGKGHSC*SSRLLF
Trigger: GAACAGTAGTCGAGAAGACAAGCATGAATGTCCCTT...CCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp CAGGACCTCCCAGGAGAAGGTAACACCAAACGCTTGGATAGCAACAGTCCGTCCACCACCTGCATTACCTaGTTGAAGTCTTCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: QDLPGEGNTKRLDSNSPSTTCIT*LKSSEV
Trigger: AACTTCTGAAGACTTCAACAAGGTAATGCAGGTGGT...GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp GACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCAAGTTCAAGCACCTCCTaGTTTTGTTTAAGGGCACCT +
Preference number: 5 (lower is better)
Translates to: DPQLPFTKGRFQGVGVFSSSSTS*FCLRAP
Trigger: AGGTGCCCTTAAACAAAACAAGGAGGTGCTTGAACT...TGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp TCTGACAGCTTGACCATCCTGTGGAACTTGAGTTGCAGCAGGACCTCCCAGGAGAGTTCAGTTGGCAGTTaGAGTCATACAAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: SDSLTILWNLSCSRTSQESSVGS*SHTRWR
Trigger: TCTCCATCTTGTATGACTCAAACTGCCAACTGAACT...CTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTCTAGGTGTTCCAGTTTaGGAAGGGGCATGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSLGVPV*EGACLG
Trigger: GCCCAGACATGCCCCTTCCAAAACTGGAACACCTAG...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp ACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATAGGAGGATGTGGGGTTaGGTCTTCTCATCAAATAGC +
Preference number: 5 (lower is better)
Translates to: THSFPLPKDGSKAWVCFHRRMWG*VFSSNS
Trigger: GCTATTTGATGAGAAGACCAAACCCCACATCCTCCT...ATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp TCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCCAGGAGGATGTGGGGTTaGGTCTTCTCATCAAATAGC +
Preference number: 5 (lower is better)
Translates to: SLYQRTVPRRGCVFIPLSRRMWG*VFSSNS
Trigger: GCTATTTGATGAGAAGACCAAACCCCACATCCTCCT...GGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp CCAATGTACATAAACATCACCCAATTCAGCAGGTCTAGGGTGGAGCTGAAGAGCGGTAACACCAAACGCTaGGATAGCAACAGTCCGTCC +
Preference number: 5 (lower is better)
Translates to: PMYINITQFSRSRVELKSGNTKR*DSNSPS
Trigger: GGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACC...GCTCTTCAGCTCCACCCTAGACCTGCTGAATTGGGTGATGTTTATGTACATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTACCATCCTGTGGAACTaGAGTTGCAGCAGGACCTCC +
Preference number: 5 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSTILWN*SCSRTS
Trigger: GGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGT...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
CDS-3UTR CAA 90 bp GAAGCAGTGGAGCCGAGGAACAGAATCAGGGCGGTGAGCAAGATGCCAGCTAGGTATGCATTCTTTTCATaGCTAAATGTGCTCCCTCAA +
Preference number: 5 (lower is better)
Translates to: EAVEPRNRIRAVSKMPARYAFFS*LNVLPQ
Trigger: TTGAGGGAGCACATTTAGCAATGAAAAGAATGCATA...CCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp GGGAATGTGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTTCCCTTTTTCATGGATaGGATCTTGTAACCCATAAG +
Preference number: 5 (lower is better)
Translates to: GNVDPQLPFTKGRFQGVGSLFHG*DLVTHK
Trigger: CTTATGGGTTACAAGATCCAATCCATGAAAAAGGGA...ACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS TCA 90 bp GGGAGGCTGGAGGGAGAGCGCATACTGGAGATAGCTTACTTACAATaGACCCAAGCTTCTTATAATCTCGCGTGTACATGGACTTGCGTT +
Preference number: 5 (lower is better)
Translates to: GRLEGERILEIAYLQ*TQASYNLACTWTCV
Trigger: AACGCAAGTCCATGTACACGCGAGATTATAAGAAGCTTGGGTTCATTGTAAGTAAGCTATCTCCAGTATGCGCTCTCCCTCCAGCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS GCA 90 bp TCATGGCTATTGAGCACCATCGACTCCAAAATGGCCAAGGACCGCTaGAGGATCGAGATGTCTATGGCTGACTTGTTCACAAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: SWLLSTIDSKMAKDR*RIEMSMADLFTKLA
Trigger: AGCAAGTTTTGTGAACAAGTCAGCCATAGACATCTCGATCCTGCAGCGGTCCTTGGCCATTTTGGAGTCGATGGTGCTCAATAGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
CDS GCA 90 bp TGCCATTTCCTGAGCCTGCTAAGGTCCTTTTGTGTCCAGAATTGGTaGGTTCTCGGTCTCACTGCCTTTAAGAATGAAGCAGCGAACTGT +
Preference number: 5 (lower is better)
Translates to: CHFLSLLRSFCVQNW*VLGLTAFKNEAANC
Trigger: ACAGTTCGCTGCTTCATTCTTAAAGGCAGTGAGACCGAGAACGCACCAATTCTGGACACAAAAGGACCTTAGCAGGCTCAGGAAATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS-3UTR CAA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCGCAAAATATTCATGGTaGGCAAGAGACCACCCATCA +
Preference number: 5 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSAKYSW*ARDHPS
Trigger: TGATGGGTGGTCTCTTGCCAACCATGAATATTTTGC...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp CACTTGTGCAAGTTATTCCATTTCACTGAAGCCAGAAGAGATTTTCATGTGATCTGCGCCATCTCATTGTaGATGGCCCGCTGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: HLCKLFHFTEARRDFHVICAISL*MARWAR
Trigger: CCGAGCCCAGCGGGCCATCAACAATGAGATGGCGCA...GATCACATGAAAATCTCTTCTGGCTTCAGTGAAATGGAATAACTTGCACAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR CAA 90 bp AACATCTGGAAATGTGGAAACTATTCCGTAAAGCGCAAGAGGACCACACGCTCGATGCTGCCACTGCTGTaGTTAGGTTCAGACTCAGCA +
Preference number: 5 (lower is better)
Translates to: NIWKCGNYSVKRKRTTRSMLPLL*LGSDSA
Trigger: TGCTGAGTCTGAACCTAACAACAGCAGTGGCAGCAT...CGAGCGTGTGGTCCTCTTGCGCTTTACGGAATAGTTTCCACATTTCCAGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS-3UTR CAA 90 bp CTCTTGAACTGGTCCAGGGAGCTAGGCTTGGTTGTAAGTGCTCTCATAACCTGCAAGGGACATTCATGCTaGTCTTCTCGACTACTGTTC +
Preference number: 5 (lower is better)
Translates to: LLNWSRELGLVVSALITCKGHSC*SSRLLF
Trigger: GAACAGTAGTCGAGAAGACAAGCATGAATGTCCCTT...GCAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACCAGTTCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CAA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCAAGGGACATTCATGCTaGTCTTCTCGACTACTGTTC +
Preference number: 5 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSKGHSC*SSRLLF
Trigger: GAACAGTAGTCGAGAAGACAAGCATGAATGTCCCTT...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp TGGACCCACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTAGTTCAGTTGGCAGTTaGAGTCATACAAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: WTHSFPLPKDGSKAWVCFSSVGS*SHTRWR
Trigger: TCTCCATCTTGTATGACTCAAACTGCCAACTGAACT...AAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp GACTTAAGAAACATCCTTCGCTGGGCTCTGACCTATAATTTATTAACCCACGGTCTTGGGGCACTGCCCTaGGTCTGGTGGGCAAGTTTT +
Preference number: 5 (lower is better)
Translates to: DLRNILRWALTYNLLTHGLGALP*VWWASF
Trigger: AAAACTTGCCCACCAGACCAAGGGCAGTGCCCCAAG...ACCGTGGGTTAATAAATTATAGGTCAGAGCCCAGCGAAGGATGTTTCTTAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTGAAACAGGTTTCCAGTaGAGCCATGTGAACAGAGAC +
Preference number: 5 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSETGFQ*SHVNRD
Trigger: GTCTCTGTTCACATGGCTCAACTGGAAACCTGTTTC...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS TCA 90 bp CTCCAAAATGGCCAAGGACCGCTGCAGGATCGAGATGTCTATGGCTaGCTTGTTCACAAAACTTGCTATCTTCTTAATGAACGCCACCGA +
Preference number: 5 (lower is better)
Translates to: LQNGQGPLQDRDVYG*LVHKTCYLLNERHR
Trigger: TCGGTGGCGTTCATTAAGAAGATAGCAAGTTTTGTGAACAAGTCAGCCATAGACATCTCGATCCTGCAGCGGTCCTTGGCCATTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
CDS CCA 90 bp GGAACAGTTACCCCTGTAACAGTCATAGATGTGGTAGGAAGAGGCTaGCACAGATCAGGCATCACAATGAGCAATCCCAAATACGTTGGA +
Preference number: 5 (lower is better)
Translates to: GTVTPVTVIDVVGRG*HRSGITMSNPKYVG
Trigger: TCCAACGTATTTGGGATTGCTCATTGTGATGCCTGATCTGTGCCAGCCTCTTCCTACCACATCTATGACTGTTACAGGGGTAACTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS CCA 90 bp CATGTTGTCCCAAGCACCATCTCGGGAGTGTGCACCACTTCTCATTaGAAAGTTTGTAGGTTTGCAGAGTTCATGGAAGATTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: HVVPSTISGVCTTSH*KVCRFAEFMEDSSC
Trigger: GCAGGAAGAATCTTCCATGAACTCTGCAAACCTACAAACTTTCCAATGAGAAGTGGTGCACACTCCCGAGATGGTGCTTGGGACAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472359.1
CDS CCA 90 bp CAGCACCTTAAGGAAAATCGGCACATTTCATTTTGCAGTTGCAAATaGCTGCACATTGACCATGGCATAGGGCCAGCTTGTCTAGCCAAG +
Preference number: 5 (lower is better)
Translates to: QHLKENRHISFCSCK*LHIDHGIGPACLAK
Trigger: CTTGGCTAGACAAGCTGGCCCTATGCCATGGTCAATGTGCAGCCATTTGCAACTGCAAAATGAAATGTGCCGATTTTCCTTAAGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497024.1
CDS-3UTR CAA 90 bp GCATACTCTTCAGATCTCACAGGTCCAAAGGAGGGTCTAGGGAGGAGCTGGAGAAATGATGGAACGCAGTaGCTTCTGAGCCAAAATATT +
Preference number: 5 (lower is better)
Translates to: AYSSDLTGPKEGLGRSWRNDGTQ*LLSQNI
Trigger: AATATTTTGGCTCAGAAGCAACTGCGTTCCATCATT...TCTCCAGCTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp AATCGGGCGGGACTGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTAATGATGGAACGCAGTaGCTTCTGAGCCAAAATATT +
Preference number: 5 (lower is better)
Translates to: NRAGLEIFLVHPLGLADFNDGTQ*LLSQNI
Trigger: AATATTTTGGCTCAGAAGCAACTGCGTTCCATCATT...AAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCGCCCGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CAA 90 bp GCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCATCTCACATAGCATCTaGGTCAGCTCTATACTACTG +
Preference number: 5 (lower is better)
Translates to: ASLYQRTVPRRGCVFIPLISHSI*VSSILL
Trigger: CAGTAGTATAGAGCTGACCAAGATGCTATGTGAGAT...GAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000442504.5
CDS-3UTR CAA 90 bp TTTCATTCCTCTCTCCTGTTAGCTAGGTGTTCCAGTTTTGGAAGGGGCATGTCTTCCAGGGAGCTAGGCTaGGTTGTAAGTGCTCTCATA +
Preference number: 5 (lower is better)
Translates to: FHSSLLLARCSSFGRGMSSRELG*VVSALI
Trigger: TATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGA...AGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTTCAGGCGTTGCTGTTaGATCAGCTCTAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSFRRCC*ISSKIS
Trigger: AGAAATCTTAGAGCTGATCAAACAGCAACGCCTGAA...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCAAGCACCTCCTTGTTTaGTTTAAGGGCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLKHLLV*FKGTFL
Trigger: GAGAAAGGTGCCCTTAAACAAAACAAGGAGGTGCTT...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp TTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTCAGTTCAAGCACCTCCTaGTTTTGTTTAAGGGCACCT +
Preference number: 5 (lower is better)
Translates to: FPLPKDGSKAWVCFHSSLSSSTS*FCLRAP
Trigger: AGGTGCCCTTAAACAAAACAAGGAGGTGCTTGAACT...GAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CACAGCTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCAGTTCAGTTGGCAGTTaGAGTCATACAAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: HSFPLPKDGSKAWVCFHSSSVGS*SHTRWR
Trigger: TCTCCATCTTGTATGACTCAAACTGCCAACTGAACT...GGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTATACAGTACTCATGCTaGTCAGGAGCGATGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSIQYSC*SGAMKF
Trigger: GAACTTCATCGCTCCTGACAAGCATGAGTACTGTAT...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
CDS-3UTR CAA 90 bp TGGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGGATTTTCAGGATCTCAGTGATCTCACATAGCATCTaGGTCAGCTCTATACTACTG +
Preference number: 5 (lower is better)
Translates to: WKSSWFILSDWRIFRISVISHSI*VSSILL
Trigger: CAGTAGTATAGAGCTGACCAAGATGCTATGTGAGAT...CACTGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS GCA 90 bp CCACTTTCAAGATCTCACATAGCATCTTGGTCAGCTCTATACTACTaGGGCCAAAGGGACATTCATGCTTGTCTTCTCGACTACTGTTCT +
Preference number: 5 (lower is better)
Translates to: PLSRSHIASWSALYY*GQRDIHACLLDYCS
Trigger: AGAACAGTAGTCGAGAAGACAAGCATGAATGTCCCTTTGGCCGCAGTAGTATAGAGCTGACCAAGATGCTATGTGAGATCTTGAAAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310758.9
ENST00000420636.5
ENST00000442504.5
ENST00000448602.5
ENST00000472359.1
CDS CCA 90 bp TTCCAGTTGAGCCATGTGAACAGAGACCCGCCGCACACCTTTAAATaGTATACACTCCAAGTCCAGAAGAATAAGCATGTAGCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: FQLSHVNRDPPHTFK*YTLQVQKNKHVALL
Trigger: AAGCAAAGCTACATGCTTATTCTTCTGGACTTGGAGTGTATACCATTTAAAGGTGTGCGGCGGGTCTCTGTTCACATGGCTCAACTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS CCA 90 bp ACGTGTCTATACCTACTCCAAGGAGAGGCTGAACTAGAAGGGCCTTaGGCATATCTTGATCTGTATCTTCTCTGCCTTGTATGGTATAAG +
Preference number: 5 (lower is better)
Translates to: TCLYLLQGEAELEGP*AYLDLYLLCLVWYK
Trigger: CTTATACCATACAAGGCAGAGAAGATACAGATCAAGATATGCCCAAGGCCCTTCTAGTTCAGCCTCTCCTTGGAGTAGGTATAGACACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445322.1
ENST00000453399.5
CDS-3UTR CAA 90 bp TTCCATGTCTTGTTCAGGAGCTGGATACAGATGCAGAAAAACTCCTCAAAGGATATGCTGCCACTGCTGTaGTTAGGTTCAGACTCAGCA +
Preference number: 5 (lower is better)
Translates to: FHVLFRSWIQMQKNSSKDMLPLL*LGSDSA
Trigger: TGCTGAGTCTGAACCTAACAACAGCAGTGGCAGCAT...ATCCTTTGAGGAGTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGACATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420636.5
CDS-3UTR CAA 90 bp GACTTAAGAAACATCCTTCGCTGGGCTCTGACCTATAATTTATTAACCCACGGTGTGAGGAGGGAAGATTaGTCACGATCACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: DLRNILRWALTYNLLTHGVRRED*SRSQCR
Trigger: TCTGCACTGTGATCGTGACAAATCTTCCCTCCTCAC...ACCGTGGGTTAATAAATTATAGGTCAGAGCCCAGCGAAGGATGTTTCTTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS-3UTR CAA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGCCAGGGATGCTCCGATaGGCAGGAGTCGGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: PFYSTACLRECYFQEDVWPGMLR*AGVGER
Trigger: TCTTTCCCCGACTCCTGCCAATCGGAGCATCCCTGG...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS GCA 90 bp CCTTTCCTCTCCCCGTTCAGAATGATTATAACTCGTCTGGAATCCTaGTCGGTGCTTGGGTTGCATCTTGCCACATACATTTTTAAGTTT +
Preference number: 5 (lower is better)
Translates to: PFLSPFRMIITRLES*SVLGLHLATYIFKF
Trigger: AAACTTAAAAATGTATGTGGCAAGATGCAACCCAAGCACCGAGCAGGATTCCAGACGAGTTATAATCATTCTGAACGGGGAGAGGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396040.6
CDS GCA 90 bp ATGATTCCTTTTAACCATGTTGTCCCAAGCACCATCTCGGGAGTGTaGACCACTTCTCATTGGAAAGTTTGTAGGTTTGCAGAGTTCATG +
Preference number: 5 (lower is better)
Translates to: MIPFNHVVPSTISGV*TTSHWKVCRFAEFM
Trigger: CATGAACTCTGCAAACCTACAAACTTTCCAATGAGAAGTGGTGCACACTCCCGAGATGGTGCTTGGGACAACATGGTTAAAAGGAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472359.1
CDS-3UTR CAA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGCTTGGGGCACTGCCCTaGGTCTGGTGGGCAAGTTTT +
Preference number: 5 (lower is better)
Translates to: PFYSTACLRECYFQEDVWLGALP*VWWASF
Trigger: AAAACTTGCCCACCAGACCAAGGGCAGTGCCCCAAG...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000396045.7
CDS-3UTR CAA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGCCTGTGGAACTTGAGTaGCAGCAGGACCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PFYSTACLRECYFQEDVWPVELE*QQDLPG
Trigger: TCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGG...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000396045.7
CDS-3UTR CAA 90 bp CTTCCCTTTACCAAAGGACGGTTCCAAGGCGTGGGTGTGTTTTCATTCCTCTCTAATAAGCATGTAGCTTaGCTTATGTTTATGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LPFTKGRFQGVGVFSFLSNKHVA*LMFMEL
Trigger: CAGCTCCATAAACATAAGCAAAGCTACATGCTTATT...AGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS-3UTR CAA 90 bp GACTTAAGAAACATCCTTCGCTGGGCTCTGACCTATAATTTATTAACCCACGGTAGTTCAAGCACCTCCTaGTTTTGTTTAAGGGCACCT +
Preference number: 5 (lower is better)
Translates to: DLRNILRWALTYNLLTHGSSSTS*FCLRAP
Trigger: AGGTGCCCTTAAACAAAACAAGGAGGTGCTTGAACT...ACCGTGGGTTAATAAATTATAGGTCAGAGCCCAGCGAAGGATGTTTCTTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310758.9
CDS CCA 90 bp CAAACTCAAATCTTAAAGCAGAAGTGTCCAATCTTTTGGCTTCCCTaGGCCACAGGAAGAAGAAGAATGTCTTGGGCCACACATAAAATA +
Preference number: 5 (lower is better)
Translates to: QTQILKQKCPIFWLP*ATGRRRMSWATHKI
Trigger: TATTTTATGTGTGGCCCAAGACATTCTTCTTCTTCCTGTGGCCCAGGGAAGCCAAAAGATTGGACACTTCTGCTTTAAGATTTGAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463390.1
CDS CCA 90 bp AGGCTGGCACAGATCAGGCATCACAATGAGCAATCCCAAATACGTTaGAGTGATTTGTTTGCAACATCTCTTAAATCTTTTCCTAGAGGT +
Preference number: 5 (lower is better)
Translates to: RLAQIRHHNEQSQIR*SDLFATSLKSFPRG
Trigger: ACCTCTAGGAAAAGATTTAAGAGATGTTGCAAACAAATCACTCCAACGTATTTGGGATTGCTCATTGTGATGCCTGATCTGTGCCAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS GCA 90 bp TTGAAGTCCCCCTACTTAAAAGACAGAAATGTCAAACACCATGCATaGCTCAGATCTGCTATAAATAATATGTGTGCAGAGCATGACTTC +
Preference number: 5 (lower is better)
Translates to: LKSPYLKDRNVKHHA*LRSAINNMCAEHDF
Trigger: GAAGTCATGCTCTGCACACATATTATTTATAGCAGATCTGAGGCATGCATGGTGTTTGACATTTCTGTCTTTTAAGTAGGGGGACTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448602.5
CDS CCA 90 bp ATAGTGCCTCTTACACTGGCTTTCACATCTTTCCATTCACTGAGCTaGGAATGTGAGGATCATTATCTCAAGAACACAAATTCCATTCTT +
Preference number: 5 (lower is better)
Translates to: IVPLTLAFTSFHSLS*ECEDHYLKNTNSIL
Trigger: AAGAATGGAATTTGTGTTCTTGAGATAATGATCCTCACATTCCCAGCTCAGTGAATGGAAAGATGTGAAAGCCAGTGTAAGAGGCACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463390.1
CDS-3UTR CAA 90 bp CCATTTTATTCCACAGCATGTTTAAGGGAATGTTATTTTCAGGAAGATGTTTGGTTCAGGCGTTGCTGTTaGATCAGCTCTAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: PFYSTACLRECYFQEDVWFRRCC*ISSKIS
Trigger: AGAAATCTTAGAGCTGATCAAACAGCAACGCCTGAA...CCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310758.9
ENST00000396045.7
CDS-3UTR CAA 90 bp TTATTCCATTTCACTGAAGCCAGAAGAGATTTTCATGTGATCCTGTTTAAACCAAATGATGGAACGCAGTaGCTTCTGAGCCAAAATATT +
Preference number: 5 (lower is better)
Translates to: LFHFTEARRDFHVILFKPNDGTQ*LLSQNI
Trigger: AATATTTTGGCTCAGAAGCAACTGCGTTCCATCATT...TGGTTTAAACAGGATCACATGAAAATCTCTTCTGGCTTCAGTGAAATGGAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS GCA 72 bp GCCGCCCCCGGCACCTGCGCCAGGACACTCGTGGTCTaGGCGTTCGCCTTGCGCCCGCACCCTGCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: AAPGTCARTLVV*AFALRPHPAWS
Trigger: GGACCAGGCAGGGTGCGGGCGCAAGGCGAACGCGCAGACCACGAGTGTCCTGGCGCAGGTGCCGGGGGCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445322.1
ENST00000448602.5
CDS GCA 72 bp GGCCGCGGCGGCGTGGGTGGCTCTGCCTCTATCCTGTaGCCATCCTCGCCCGCTCCCGCTCGCCCCAGCACA +
Preference number: 6 (lower is better)
Translates to: GRGGVGGSASIL*PSSPAPARPST
Trigger: TGTGCTGGGGCGAGCGGGAGCGGGCGAGGATGGGCACAGGATAGAGGCAGAGCCACCCACGCCGCCGCGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000445322.1
ENST00000463390.1
CDS GCA 72 bp GCCGCGAACTCTCCTCCCGAGCGGACGCTGCGGAGTTaGAGCCGCCGCCCCCGGCACCTGCGCCAGGACACT +
Preference number: 6 (lower is better)
Translates to: AANSPPERTLRS*SRRPRHLRQDT
Trigger: AGTGTCCTGGCGCAGGTGCCGGGGGCGGCGGCTGCAACTCCGCAGCGTCCGCTCGGGAGGAGAGTTCGCGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445322.1
ENST00000448602.5
CDS CCA 72 bp GCTCTGTCGCCCAGCGTGGGGCCGCGGCGGCGTGGGTaGCTCTGCCTCTATCCTGTGCCCATCCTCGCCCGC +
Preference number: 6 (lower is better)
Translates to: ALSPSVGPRRRG*LCLYPVPILAR
Trigger: GCGGGCGAGGATGGGCACAGGATAGAGGCAGAGCCACCCACGCCGCCGCGGCCCCACGCTGGGCGACAGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000445322.1
ENST00000463390.1
CDS CCA 72 bp CAGAGCTCCGGCGACCCGCCACCATTGAAGGGGAACTaGAGGCTCTGTCGCCCAGCGTGGGGCCGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: QSSGDPPPLKGN*RLCRPAWGRGG
Trigger: GCCGCCGCGGCCCCACGCTGGGCGACAGAGCCTCCAGTTCCCCTTCAATGGTGGCGGGTCGCCGGAGCTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000445322.1
ENST00000463390.1
CDS CAA 90 bp GCGGCAAGGGTTCCCGGCGATCAGAGCTCCGGCGACCCGCCACCATaGAAGGGGAACTGGAGGCTCTGTCGCCCAGCGTGGGGCCGCGGC +
Preference number: 6 (lower is better)
Translates to: AARVPGDQSSGDPPP*KGNWRLCRPAWGRG
Trigger: GCCGCGGCCCCACGCTGGGCGACAGAGCCTCCAGTTCCCCTTCAATGGTGGCGGGTCGCCGGAGCTCTGATCGCCGGGAACCCTTGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000445322.1
ENST00000463390.1
CDS TCA 72 bp TTCCCGGCGATCAGAGCTCCGGCGACCCGCCACCATTaGAGGGGAACTGGAGGCTCTGTCGCCCAGCGTGGG +
Preference number: 6 (lower is better)
Translates to: FPAIRAPATRHH*RGTGGSVAQRG
Trigger: CCCACGCTGGGCGACAGAGCCTCCAGTTCCCCTTCAATGGTGGCGGGTCGCCGGAGCTCTGATCGCCGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000445322.1
ENST00000463390.1
CDS CAA 72 bp GTTCCCGGCGATCAGAGCTCCGGCGACCCGCCACCATaGAAGGGGAACTGGAGGCTCTGTCGCCCAGCGTGG +
Preference number: 6 (lower is better)
Translates to: VPGDQSSGDPPP*KGNWRLCRPAW
Trigger: CCACGCTGGGCGACAGAGCCTCCAGTTCCCCTTCAATGGTGGCGGGTCGCCGGAGCTCTGATCGCCGGGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000445322.1
ENST00000463390.1
CDS TCA 72 bp CTCCCGGTGGGTTCGTGGTCTCGCTGGCTTCAAGAGTaGATAGCGAAGCTGCAAACCTTCGCGGTGAGTGCT +
Preference number: 6 (lower is better)
Translates to: LPVGSWSRWLQE*IAKLQTFAVSA
Trigger: AGCACTCACCGCGAAGGTTTGCAGCTTCGCTATTCACTCTTGAAGCCAGCGAGACCACGAACCCACCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS TCA 72 bp CATCTCCTTTATGAGGTGGGGCTTAGAGAGGCTCAATaGGTGTCCAAGGTGACAGCACCGCCTGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: HLLYEVGLREAQ*VSKVTAPPASS
Trigger: CGAGGAGGCAGGCGGTGCTGTCACCTTGGACACTCATTGAGCCTCTCTAAGCCCCACCTCATAAAGGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497024.1
CDS GCA 72 bp TCCTTCCTCCTGCTGGCCAGAGACACATTTTGCATCTaGAAGGCATCCGGAGATCAGCCGCGAACTCTCCTC +
Preference number: 6 (lower is better)
Translates to: SFLLLARDTFCI*KASGDQPRTLL
Trigger: GAGGAGAGTTCGCGGCTGATCTCCGGATGCCTTGCAGATGCAAAATGTGTCTCTGGCCAGCAGGAGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445322.1
ENST00000448602.5
CDS GCA 72 bp AGAGGCTCAATGAGTGTCCAAGGTGACAGCACCGCCTaGCTCCTCGCCCGCCACCAAAACTGTGTTATTCTC +
Preference number: 6 (lower is better)
Translates to: RGSMSVQGDSTA*LLARHQNCVIL
Trigger: GAGAATAACACAGTTTTGGTGGCGGGCGAGGAGGCAGGCGGTGCTGTCACCTTGGACACTCATTGAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497024.1
CDS GCA 72 bp TCCTCTTCCTTCCTCCTGCTGGCCAGAGACACATTTTaGATCTGCAAGGCATCCGGAGATCAGCCGCGAACT +
Preference number: 6 (lower is better)
Translates to: SSSFLLLARDTF*ICKASGDQPRT
Trigger: AGTTCGCGGCTGATCTCCGGATGCCTTGCAGATGCAAAATGTGTCTCTGGCCAGCAGGAGGAAGGAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445322.1
ENST00000448602.5
CDS GCA 72 bp CTTGATCTGTATCTTCTCTGCCTTGTATGGTATAAGTaGTCCCTGCTCTGCCCCACTCTGGGTCGGCCGGCT +
Preference number: 6 (lower is better)
Translates to: LDLYLLCLVWYK*SLLCPTLGRPA
Trigger: AGCCGGCCGACCCAGAGTGGGGCAGAGCAGGGAGCACTTATACCATACAAGGCAGAGAAGATACAGATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453399.5
CDS GCA 72 bp CATGGCATAGGGCCAGCTTGTCTAGCCAAGCGGAGCTaGAATGAGGCTGATGGAAGGAGGAACCATGCTCTT +
Preference number: 6 (lower is better)
Translates to: HGIGPACLAKRS*NEADGRRNHAL
Trigger: AAGAGCATGGTTCCTCCTTCCATCAGCCTCATTGCAGCTCCGCTTGGCTAGACAAGCTGGCCCTATGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497024.1
CDS CCA 72 bp CGGCCATTCTATGGCCACCTTGACGATGTCCGCGGGTaGCGGCATTGTAAGTCCCCAAAATGTTCAAAGCCA +
Preference number: 6 (lower is better)
Translates to: RPFYGHLDDVRG*RHCKSPKCSKP
Trigger: TGGCTTTGAACATTTTGGGGACTTACAATGCCGCCACCCGCGGACATCGTCAAGGTGGCCATAGAATGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000445322.1
ENST00000448602.5
ENST00000453399.5
ENST00000455119.5
ENST00000455879.5
ENST00000463390.1
CDS CCA 72 bp GTGAGGAGAGAGATACCGTCCAGGTTTATAAACTCCTaGGCAAACGTGACATCCCGGGAGAGGCTGGCCAAG +
Preference number: 6 (lower is better)
Translates to: VRREIPSRFINS*ANVTSRERLAK
Trigger: CTTGGCCAGCCTCTCCCGGGATGTCACGTTTGCCCAGGAGTTTATAAACCTGGACGGTATCTCTCTCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
ENST00000455119.5
ENST00000455879.5
CDS CAA 90 bp CTTTCACCGTTAGTGTTACAGCTCTTAAAGGTGGCGCGTCCGGAGTaGTTTCTTCCTCCCGGTGGGTTCGTGGTCTCGCTGGCTTCAAGA +
Preference number: 6 (lower is better)
Translates to: LSPLVLQLLKVARPE*FLPPGGFVVSLASR
Trigger: TCTTGAAGCCAGCGAGACCACGAACCCACCGGGAGGAAGAAACAACTCCGGACGCGCCACCTTTAAGAGCTGTAACACTAACGGTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS TCA 72 bp TCTCCTGCGCCACTTTCTGGTAGAGGTCATGGCTATTaGGCACCATCGACTCCAAAATGGCCAAGGACCGCT +
Preference number: 6 (lower is better)
Translates to: SPAPLSGRGHGY*APSTPKWPRTA
Trigger: AGCGGTCCTTGGCCATTTTGGAGTCGATGGTGCTCAATAGCCATGACCTCTACCAGAAAGTGGCGCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
CDS GCA 72 bp CTTGATCTGTATCTTCTCTGCCTTGTATGGTATAAGTaGTCCCTGCTCTGCCCCCTGCTTGGGGTCGCAGGA +
Preference number: 6 (lower is better)
Translates to: LDLYLLCLVWYK*SLLCPLLGVAG
Trigger: TCCTGCGACCCCAAGCAGGGGGCAGAGCAGGGAGCACTTATACCATACAAGGCAGAGAAGATACAGATCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445322.1
CDS GCA 72 bp TCAGCTCTGAAAATCCCCTGCTGGGCATATTCTACATaGCAGGCAGTGGGCAGAGCACAGAGGATGCACAGA +
Preference number: 6 (lower is better)
Translates to: SALKIPCWAYST*QAVGRAQRMHR
Trigger: TCTGTGCATCCTCTGTGCTCTGCCCACTGCCTGGCATGTAGAATATGCCCAGCAGGGGATTTTCAGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS CCA 72 bp TATGTTTATGGAGCTGGAGCCCAGGGATGCTCCGATTaGCAGGAGTCGGGGAAAGATCAGCCAATCAAAGGG +
Preference number: 6 (lower is better)
Translates to: YVYGAGAQGCSD*QESGKDQPIKG
Trigger: CCCTTTGATTGGCTGATCTTTCCCCGACTCCTGCCAATCGGAGCATCCCTGGGCTCCAGCTCCATAAACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS CCA 72 bp AAATCCCCTGCTGGGCATATTCTACATGCCAGGCAGTaGGCAGAGCACAGAGGATGCACAGATGACTGGCTA +
Preference number: 6 (lower is better)
Translates to: KSPAGHILHARQ*AEHRGCTDDWL
Trigger: TAGCCAGTCATCTGTGCATCCTCTGTGCTCTGCCCACTGCCTGGCATGTAGAATATGCCCAGCAGGGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS CAA 72 bp CGACAATACCAAAACTTGTCTTGCCTCCGCCGGGCATaGAGTTTCCTAAAGCAGGTCCCTTCCACAAGGCGG +
Preference number: 6 (lower is better)
Translates to: RQYQNLSCLRRA*SFLKQVPSTRR
Trigger: CCGCCTTGTGGAAGGGACCTGCTTTAGGAAACTCAATGCCCGGCGGAGGCAAGACAAGTTTTGGTATTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
ENST00000448602.5
CDS TCA 72 bp TCATATGAGGGCAGTCCTTTCCCGTCACCACGGCTTTaGTATCTGCCACCGGCAGTTTGTCCTGCAAGGAAT +
Preference number: 6 (lower is better)
Translates to: SYEGSPFPSPRL*YLPPAVCPARN
Trigger: ATTCCTTGCAGGACAAACTGCCGGTGGCAGATATCAAAGCCGTGGTGACGGGAAAGGACTGCCCTCATATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
ENST00000448602.5
ENST00000464262.6
CDS TCA 72 bp CTGCTGCCACCACAAAGCGACTTAGAGTCGTCCCCCTaGAGAACAATGTGCTGGAATACCACCAGATGGTTC +
Preference number: 6 (lower is better)
Translates to: LLPPQSDLESSP*RTMCWNTTRWF
Trigger: GAACCATCTGGTGGTATTCCAGCACATTGTTCTTCAGGGGGACGACTCTAAGTCGCTTTGTGGTGGCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396045.7
ENST00000464262.6
ENST00000487843.1
CDS GCA 72 bp AGGGAGCTAGGCTTGGTTGTAAGTGCTCTCATAACCTaGTCCTTCACCACCTGCATTACCTTTCCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: RELGLVVSALIT*SFTTCITFPLP
Trigger: GGGGAGAGGAAAGGTAATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396040.6
CDS GCA 72 bp ATTCAAAGCTATCCTGGGCCGCAGGTTAGACAAGCTTaGCCTTCGCCTGGAATAAGGTCTTCCTCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: IQSYPGPQVRQA*PSPGIRSSSSA
Trigger: TGCAGAGGAGGAAGACCTTATTCCAGGCGAAGGGCAAGCTTGTCTAACCTGCGGCCCAGGATAGCTTTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463390.1
CDS CCA 72 bp TACAGCTGGTGCGCCATCTCATTGTTGATGGCCCGCTaGGCTCGGATGACATGTGTTAAAATGATGGAACGC +
Preference number: 6 (lower is better)
Translates to: YSWCAISLLMAR*ARMTCVKMMER
Trigger: GCGTTCCATCATTTTAACACATGTCATCCGAGCCCAGCGGGCCATCAACAATGAGATGGCGCACCAGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310758.9
ENST00000420636.5
ENST00000424212.1
ENST00000433246.5
ENST00000442504.5
ENST00000448602.5
ENST00000487336.1
CDS CCA 72 bp TTCCTTCAGATGTTCAGATGCGTCCGGAGTTTCTTCTaGGGGGTTCGTGGTCTCCCTGACTTCAGGAGTGAT +
Preference number: 6 (lower is better)
Translates to: FLQMFRCVRSFF*GVRGLPDFRSD
Trigger: ATCACTCCTGAAGTCAGGGAGACCACGAACCCCCCAGAAGAAACTCCGGACGCATCTGAACATCTGAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS CCA 72 bp GCCGACAATACCAAAACTTGTAAAATCGGGCGGGACTaGAAATCTTCCTGGTTCATCCTCTCGGACTGGCGG +
Preference number: 6 (lower is better)
Translates to: ADNTKTCKIGRD*KSSWFILSDWR
Trigger: CCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCGCCCGATTTTACAAGTTTTGGTATTGTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464262.6
CDS CAA 72 bp AGCACTTGTAGAACATACAGCTGGTGCGCCATCTCATaGTTGATGGCCCGCTGGGCTCGGATGACATGTGTT +
Preference number: 6 (lower is better)
Translates to: STCRTYSWCAIS*LMARWARMTCV
Trigger: AACACATGTCATCCGAGCCCAGCGGGCCATCAACAATGAGATGGCGCACCAGCTGTATGTTCTACAAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310758.9
ENST00000420636.5
ENST00000424212.1
ENST00000433246.5
ENST00000442504.5
ENST00000448602.5
ENST00000487336.1
CDS CAA 72 bp TTATGTTTATGGAGCTGGAGCCCAGGGATGCTCCGATaGGCAGGAGTCGGGGAAAGATCAGCCAATCAAAGG +
Preference number: 6 (lower is better)
Translates to: LCLWSWSPGMLR*AGVGERSANQR
Trigger: CCTTTGATTGGCTGATCTTTCCCCGACTCCTGCCAATCGGAGCATCCCTGGGCTCCAGCTCCATAAACATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS CAA 90 bp CCTGAGGACTCTCTTCTAAGTCTCCGTAATGCAGGACTTTGTGATTaGGCGAAAGCCGACAATACCAAAACTTGTCTTGCCTCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: PEDSLLSLRNAGLCD*AKADNTKTCLASAG
Trigger: CCCGGCGGAGGCAAGACAAGTTTTGGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTGCATTACGGAGACTTAGAAGAGAGTCCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
ENST00000448602.5
CDS GCA 72 bp GACAGCATGTCTCCAAAGCAAGGCTTCATGATCTTCTaGAATTTCTGGTATCGCTCAGTGCCGCTCTCCACC +
Preference number: 6 (lower is better)
Translates to: DSMSPKQGFMIF*NFWYRSVPLST
Trigger: GGTGGAGAGCGGCACTGAGCGATACCAGAAATTGCAGAAGATCATGAAGCCTTGCTTTGGAGACATGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
CDS GCA 72 bp TTGAGCACCATCGACTCCAAAATGGCCAAGGACCGCTaGAGGATCGAGATGTCTATGGCTGACTTGTTCACA +
Preference number: 6 (lower is better)
Translates to: LSTIDSKMAKDR*RIEMSMADLFT
Trigger: TGTGAACAAGTCAGCCATAGACATCTCGATCCTGCAGCGGTCCTTGGCCATTTTGGAGTCGATGGTGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
CDS GCA 72 bp GAAGGGCCTTGGGCATATCTTGATCTGTATCTTCTCTaGCTTGTATGGTATAAGTGCTCCCTGCTCTGCCCC +
Preference number: 6 (lower is better)
Translates to: EGPWAYLDLYLL*LVWYKCSLLCP
Trigger: GGGGCAGAGCAGGGAGCACTTATACCATACAAGGCAGAGAAGATACAGATCAAGATATGCCCAAGGCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445322.1
ENST00000453399.5
CDS GCA 72 bp AGCATGTCTCCAAAGTCAGTGCCGCTCTCCACCATCTaGGTGAGGAGAGAGATACCGTCCAGGTTTATAAAC +
Preference number: 6 (lower is better)
Translates to: SMSPKSVPLSTI*VRREIPSRFIN
Trigger: GTTTATAAACCTGGACGGTATCTCTCTCCTCACGCAGATGGTGGAGAGCGGCACTGACTTTGGAGACATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455119.5
CDS CCA 72 bp TGGGCATATCTTGATCTGTATCTTCTCTGCCTTGTATaGTATAAGTGCTCCCTGCTCTGCCCCCTGCTTGGG +
Preference number: 6 (lower is better)
Translates to: WAYLDLYLLCLV*YKCSLLCPLLG
Trigger: CCCAAGCAGGGGGCAGAGCAGGGAGCACTTATACCATACAAGGCAGAGAAGATACAGATCAAGATATGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445322.1
CDS CAA 72 bp ACACGTGTCTATACCTTAAGACTGCCAATGGTCCATTaGCGGCACCTGCTGGTGGCAATGCGTAAAGGAACC +
Preference number: 6 (lower is better)
Translates to: TRVYTLRLPMVH*RHLLVAMRKGT
Trigger: GGTTCCTTTACGCATTGCCACCAGCAGGTGCCGCAAATGGACCATTGGCAGTCTTAAGGTATAGACACGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS TCA 72 bp ATCTTCAGTTTCACCACTCTCCCATCTGGTCAGCTCTaGAAATCCCCTGCTGGGCATATTCTACATGCCAGG +
Preference number: 6 (lower is better)
Translates to: IFSFTTLPSGQL*KSPAGHILHAR
Trigger: CCTGGCATGTAGAATATGCCCAGCAGGGGATTTTCAGAGCTGACCAGATGGGAGAGTGGTGAAACTGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS GCA 72 bp AATTTCTGGTATCGCTCAGTGCCGCTCTCCACCATCTaGGTGAGGAGAGAGATACCGTCCAGGTTTATAAAC +
Preference number: 6 (lower is better)
Translates to: NFWYRSVPLSTI*VRREIPSRFIN
Trigger: GTTTATAAACCTGGACGGTATCTCTCTCCTCACGCAGATGGTGGAGAGCGGCACTGAGCGATACCAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
ENST00000455879.5
CDS CCA 72 bp TTTAGTTCCAAAATCGGGCGGGACTGGAAATCTTCCTaGTTCATCCTCTCGGACTGGCGGATTTTCAGGATC +
Preference number: 6 (lower is better)
Translates to: FSSKIGRDWKSS*FILSDWRIFRI
Trigger: GATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCGCCCGATTTTGGAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
ENST00000448602.5
CDS CCA 72 bp TGGGCATATCTTGATCTGTATCTTCTCTGCCTTGTATaGTATAAGTGCTCCCTGCTCTGCCCCACTCTGGGT +
Preference number: 6 (lower is better)
Translates to: WAYLDLYLLCLV*YKCSLLCPTLG
Trigger: ACCCAGAGTGGGGCAGAGCAGGGAGCACTTATACCATACAAGGCAGAGAAGATACAGATCAAGATATGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453399.5
CDS CAA 72 bp ACTTGTAGAACATACAGCTGGTGCGCCATCTCATTGTaGATGGCCCGCTGGGCTCGGATGACATGTGTTAAA +
Preference number: 6 (lower is better)
Translates to: TCRTYSWCAISL*MARWARMTCVK
Trigger: TTTAACACATGTCATCCGAGCCCAGCGGGCCATCAACAATGAGATGGCGCACCAGCTGTATGTTCTACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310758.9
ENST00000420636.5
ENST00000424212.1
ENST00000433246.5
ENST00000442504.5
ENST00000448602.5
ENST00000487336.1
CDS CAA 90 bp AAGGTGAGCACTTGTAGAACATACAGCTGGTGCGCCATCTCATTGTaGATGGCCCGCTGGGCTCGGATGACATGTGTTAAAATGATGGAA +
Preference number: 6 (lower is better)
Translates to: KVSTCRTYSWCAISL*MARWARMTCVKMME
Trigger: TTCCATCATTTTAACACATGTCATCCGAGCCCAGCGGGCCATCAACAATGAGATGGCGCACCAGCTGTATGTTCTACAAGTGCTCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310758.9
ENST00000420636.5
ENST00000424212.1
ENST00000433246.5
ENST00000442504.5
ENST00000448602.5
ENST00000487336.1
CDS GCA 72 bp CCATCTCAGTCAGAGGACAATCAAGGATGTCAACATTaGTCTCTACATCAACCTGCCTCCTCTCATCAGGAG +
Preference number: 6 (lower is better)
Translates to: PSQSEDNQGCQH*SLHQPASSHQE
Trigger: CTCCTGATGAGAGGAGGCAGGTTGATGTAGAGAGCAATGTTGACATCCTTGATTGTCCTCTGACTGAGATGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433246.5
CDS GCA 72 bp CTGAGCCTGCTAAGGTCCTTTTGTGTCCAGAATTGGTaGGTTCTCGGTCTCACTGCCTTTAAGAATGAAGCA +
Preference number: 6 (lower is better)
Translates to: LSLLRSFCVQNW*VLGLTAFKNEA
Trigger: TGCTTCATTCTTAAAGGCAGTGAGACCGAGAACGCACCAATTCTGGACACAAAAGGACCTTAGCAGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS CAA 72 bp TTCCTGAGTAAGCTTGTTCATGAAACAGGTTTCCAGTaGAGCCATGTGAACAGAGACCCGCCGCACACCTTT +
Preference number: 6 (lower is better)
Translates to: FLSKLVHETGFQ*SHVNRDPPHTF
Trigger: AAAGGTGTGCGGCGGGTCTCTGTTCACATGGCTCAACTGGAAACCTGTTTCATGAACAAGCTTACTCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396045.7
ENST00000464262.6
ENST00000487843.1
CDS CAA 72 bp GCCATCTCAGTCAGAGGACAATCAAGGATGTCAACATaGCTCTCTACATCAACCTGCCTCCTCTCATCAGGA +
Preference number: 6 (lower is better)
Translates to: AISVRGQSRMST*LSTSTCLLSSG
Trigger: TCCTGATGAGAGGAGGCAGGTTGATGTAGAGAGCAATGTTGACATCCTTGATTGTCCTCTGACTGAGATGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433246.5
CDS CAA 90 bp TTAAAGGTGAGCACTTGTAGAACATACAGCTGGTGCGCCATCTCATaGTTGATGGCCCGCTGGGCTCGGATGACATGTGTTAAAATGATG +
Preference number: 6 (lower is better)
Translates to: LKVSTCRTYSWCAIS*LMARWARMTCVKMM
Trigger: CATCATTTTAACACATGTCATCCGAGCCCAGCGGGCCATCAACAATGAGATGGCGCACCAGCTGTATGTTCTACAAGTGCTCACCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310758.9
ENST00000420636.5
ENST00000424212.1
ENST00000433246.5
ENST00000442504.5
ENST00000448602.5
ENST00000487336.1
CDS CAA 90 bp CCTGAGGACTCTCTTCTAAGTCTCCGTAATGCAGGACTTTGTGATTaGGCGAAAGCCGACAATACCAAAACTTGTAAAATCGGGCGGGAC +
Preference number: 6 (lower is better)
Translates to: PEDSLLSLRNAGLCD*AKADNTKTCKIGRD
Trigger: GTCCCGCCCGATTTTACAAGTTTTGGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTGCATTACGGAGACTTAGAAGAGAGTCCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464262.6
CDS CAA 90 bp CCATCTCGGGAGTGTGCACCACTTCTCATTGGAAAGTTTGTAGGTTaGCAGAGTTCATGGAAGATTCTTCCTGCTCCTCTTTCTCTCGTC +
Preference number: 6 (lower is better)
Translates to: PSRECAPLLIGKFVG*QSSWKILPAPLSLV
Trigger: GACGAGAGAAAGAGGAGCAGGAAGAATCTTCCATGAACTCTGCAAACCTACAAACTTTCCAATGAGAAGTGGTGCACACTCCCGAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472359.1
CDS CAA 90 bp TCTCGCGTGTACATGGACTTGCGTTTCTCCATGCTGCCACTGCTGTaGTTAGGTTCAGACTCAGCATCAAAAGCAATTCTTCGAAGTTCA +
Preference number: 6 (lower is better)
Translates to: SRVYMDLRFSMLPLL*LGSDSASKAILRSS
Trigger: TGAACTTCGAAGAATTGCTTTTGATGCTGAGTCTGAACCTAACAACAGCAGTGGCAGCATGGAGAAACGCAAGTCCATGTACACGCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310758.9
ENST00000420636.5
ENST00000424212.1
ENST00000433246.5
ENST00000442504.5
ENST00000448602.5
ENST00000487336.1
CDS CAA 90 bp ACCAGATGGTTCCTGAGTAAGCTTGTTCATGAAACAGGTTTCCAGTaGAGCCATGTGAACAGAGACCCGCCGCACACCTTTAAATGGTAT +
Preference number: 6 (lower is better)
Translates to: TRWFLSKLVHETGFQ*SHVNRDPPHTFKWY
Trigger: ATACCATTTAAAGGTGTGCGGCGGGTCTCTGTTCACATGGCTCAACTGGAAACCTGTTTCATGAACAAGCTTACTCAGGAACCATCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396045.7
ENST00000487843.1
CDS TCA 72 bp ATTGTAAGTCCCCAAAATGTTCAAAGCCAGTGGGAATaGGGATCCTACAGCGTAAACGGCCACACGTGTCTA +
Preference number: 6 (lower is better)
Translates to: IVSPQNVQSQWE*GSYSVNGHTCL
Trigger: TAGACACGTGTGGCCGTTTACGCTGTAGGATCCTCATTCCCACTGGCTTTGAACATTTTGGGGACTTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000445322.1
ENST00000448602.5
ENST00000453399.5
ENST00000455119.5
ENST00000455879.5
ENST00000463390.1
CDS GCA 72 bp AGATCTCACATAGCATCTTGGTCAGCTCTATACTACTaGGGCCAAAGGGACATTCATGCTTGTCTTCTCGAC +
Preference number: 6 (lower is better)
Translates to: RSHIASWSALYY*GQRDIHACLLD
Trigger: GTCGAGAAGACAAGCATGAATGTCCCTTTGGCCGCAGTAGTATAGAGCTGACCAAGATGCTATGTGAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310758.9
ENST00000420636.5
ENST00000442504.5
ENST00000448602.5
ENST00000472359.1
CDS GCA 72 bp TCCCCGTTCAGAATGATTATAACTCGTCTGGAATCCTaGTCGGTGCTTGGGTTGCATCTTGCCACATACATT +
Preference number: 6 (lower is better)
Translates to: SPFRMIITRLES*SVLGLHLATYI
Trigger: AATGTATGTGGCAAGATGCAACCCAAGCACCGAGCAGGATTCCAGACGAGTTATAATCATTCTGAACGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396040.6
CDS CCA 72 bp TACCTACTCCAAGGAGAGGCTGAACTAGAAGGGCCTTaGGCATATCTTGATCTGTATCTTCTCTGCCTTGTA +
Preference number: 6 (lower is better)
Translates to: YLLQGEAELEGP*AYLDLYLLCLV
Trigger: TACAAGGCAGAGAAGATACAGATCAAGATATGCCCAAGGCCCTTCTAGTTCAGCCTCTCCTTGGAGTAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445322.1
ENST00000453399.5
CDS CCA 72 bp TTCCTGAGCCTGCTAAGGTCCTTTTGTGTCCAGAATTaGTGCGTTCTCGGTCTCACTGCCTTTAAGAATGAA +
Preference number: 6 (lower is better)
Translates to: FLSLLRSFCVQN*CVLGLTAFKNE
Trigger: TTCATTCTTAAAGGCAGTGAGACCGAGAACGCACCAATTCTGGACACAAAAGGACCTTAGCAGGCTCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS CCA 72 bp ATCTTAAAGCAGAAGTGTCCAATCTTTTGGCTTCCCTaGGCCACAGGAAGAAGAAGAATGTCTTGGGCCACA +
Preference number: 6 (lower is better)
Translates to: ILKQKCPIFWLP*ATGRRRMSWAT
Trigger: TGTGGCCCAAGACATTCTTCTTCTTCCTGTGGCCCAGGGAAGCCAAAAGATTGGACACTTCTGCTTTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463390.1
CDS CCA 72 bp CCAAGCACCATCTCGGGAGTGTGCACCACTTCTCATTaGAAAGTTTGTAGGTTTGCAGAGTTCATGGAAGAT +
Preference number: 6 (lower is better)
Translates to: PSTISGVCTTSH*KVCRFAEFMED
Trigger: ATCTTCCATGAACTCTGCAAACCTACAAACTTTCCAATGAGAAGTGGTGCACACTCCCGAGATGGTGCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472359.1
CDS TCA 72 bp GGCCAAGGACCGCTGCAGGATCGAGATGTCTATGGCTaGCTTGTTCACAAAACTTGCTATCTTCTTAATGAA +
Preference number: 6 (lower is better)
Translates to: GQGPLQDRDVYG*LVHKTCYLLNE
Trigger: TTCATTAAGAAGATAGCAAGTTTTGTGAACAAGTCAGCCATAGACATCTCGATCCTGCAGCGGTCCTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
CDS TCA 72 bp ATGCTTGTCAGGAGCGATGAAGTTCAGTTGGCAGTTTaGGTCATACAAGATGGAGAAAGCGAGTTCAAGCAC +
Preference number: 6 (lower is better)
Translates to: MLVRSDEVQLAV*VIQDGESEFKH
Trigger: GTGCTTGAACTCGCTTTCTCCATCTTGTATGACTCAAACTGCCAACTGAACTTCATCGCTCCTGACAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310758.9
ENST00000396040.6
ENST00000396045.7
ENST00000442504.5
ENST00000448602.5
ENST00000487843.1
ENST00000497024.1
CDS TCA 72 bp GAGGGAGAGCGCATACTGGAGATAGCTTACTTACAATaGACCCAAGCTTCTTATAATCTCGCGTGTACATGG +
Preference number: 6 (lower is better)
Translates to: EGERILEIAYLQ*TQASYNLACTW
Trigger: CCATGTACACGCGAGATTATAAGAAGCTTGGGTTCATTGTAAGTAAGCTATCTCCAGTATGCGCTCTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424212.1
CDS GCA 72 bp TTTAACCATGTTGTCCCAAGCACCATCTCGGGAGTGTaGACCACTTCTCATTGGAAAGTTTGTAGGTTTGCA +
Preference number: 6 (lower is better)
Translates to: FNHVVPSTISGV*TTSHWKVCRFA
Trigger: TGCAAACCTACAAACTTTCCAATGAGAAGTGGTGCACACTCCCGAGATGGTGCTTGGGACAACATGGTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472359.1
CDS GCA 72 bp CACCTTAAGGAAAATCGGCACATTTCATTTTGCAGTTaGAAATGGCTGCACATTGACCATGGCATAGGGCCA +
Preference number: 6 (lower is better)
Translates to: HLKENRHISFCS*KWLHIDHGIGP
Trigger: TGGCCCTATGCCATGGTCAATGTGCAGCCATTTGCAACTGCAAAATGAAATGTGCCGATTTTCCTTAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497024.1
CDS CCA 72 bp AGCCATGTGAACAGAGACCCGCCGCACACCTTTAAATaGTATACACTCCAAGTCCAGAAGAATAAGCATGTA +
Preference number: 6 (lower is better)
Translates to: SHVNRDPPHTFK*YTLQVQKNKHV
Trigger: TACATGCTTATTCTTCTGGACTTGGAGTGTATACCATTTAAAGGTGTGCGGCGGGTCTCTGTTCACATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS CAA 72 bp CCAGCCAGCTATGGTCTGGGTAAAGAACTAGAGAACTaGAGACCAACGTTTGCTATCTCTTCCCTCTTCATA +
Preference number: 6 (lower is better)
Translates to: PASYGLGKELEN*RPTFAISSLFI
Trigger: TATGAAGAGGGAAGAGATAGCAAACGTTGGTCTCAAGTTCTCTAGTTCTTTACCCAGACCATAGCTGGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442504.5
CDS CAA 90 bp TTTAAATGGTATACACTCCAAGTCCAGAAGAATAAGCATGTAGCTTaGCTTATGTTTATGGAGCTGGAGCCCAGGGATGCTCCGATTGGC +
Preference number: 6 (lower is better)
Translates to: FKWYTLQVQKNKHVA*LMFMELEPRDAPIG
Trigger: GCCAATCGGAGCATCCCTGGGCTCCAGCTCCATAAACATAAGCAAAGCTACATGCTTATTCTTCTGGACTTGGAGTGTATACCATTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS TCA 72 bp ATGACATGTGTTAAAATGATGGAACGCAGTTGCTTCTaGGCCAAAATATTCGCCATCTCCTGCCTCCTCTCA +
Preference number: 6 (lower is better)
Translates to: MTCVKMMERSCF*AKIFAISCLLS
Trigger: TGAGAGGAGGCAGGAGATGGCGAATATTTTGGCTCAGAAGCAACTGCGTTCCATCATTTTAACACATGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
ENST00000487336.1
CDS CCA 72 bp TTTGAACTATCGGCATGCTGGAGTGCAAAATATTCATaGTTGGCAAGAGACCACCCATCACAGACTTCCTTT +
Preference number: 6 (lower is better)
Translates to: FELSACWSAKYS*LARDHPSQTSF
Trigger: AAAGGAAGTCTGTGATGGGTGGTCTCTTGCCAACCATGAATATTTTGCACTCCAGCATGCCGATAGTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000445322.1
ENST00000448602.5
ENST00000453399.5
ENST00000455119.5
ENST00000455879.5
ENST00000463390.1
CDS CAA 72 bp TACATGGACTTGCGTTTCTCCATGCTGCCACTGCTGTaGTTAGGTTCAGACTCAGCATCAAAAGCAATTCTT +
Preference number: 6 (lower is better)
Translates to: YMDLRFSMLPLL*LGSDSASKAIL
Trigger: AAGAATTGCTTTTGATGCTGAGTCTGAACCTAACAACAGCAGTGGCAGCATGGAGAAACGCAAGTCCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310758.9
ENST00000420636.5
ENST00000424212.1
ENST00000433246.5
ENST00000442504.5
ENST00000448602.5
ENST00000487336.1
CDS CAA 72 bp TATACACTCCAAGTCCAGAAGAATAAGCATGTAGCTTaGCTTATGTTTATGGAGCTGGAGCCCAGGGATGCT +
Preference number: 6 (lower is better)
Translates to: YTLQVQKNKHVA*LMFMELEPRDA
Trigger: AGCATCCCTGGGCTCCAGCTCCATAAACATAAGCAAAGCTACATGCTTATTCTTCTGGACTTGGAGTGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396045.7
CDS CAA 90 bp TTCAGAATGATTATAACTCGTCTGGAATCCTGCTCGGTGCTTGGGTaGCATCTTGCCACATACATTTTTAAGTTTGCAGCTAGAAGGGTC +
Preference number: 6 (lower is better)
Translates to: FRMIITRLESCSVLG*HLATYIFKFAARRV
Trigger: GACCCTTCTAGCTGCAAACTTAAAAATGTATGTGGCAAGATGCAACCCAAGCACCGAGCAGGATTCCAGACGAGTTATAATCATTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396040.6
CDS TCA 72 bp TGCCTCTTACACTGGCTTTCACATCTTTCCATTCACTaGGCTGGGAATGTGAGGATCATTATCTCAAGAACA +
Preference number: 6 (lower is better)
Translates to: CLLHWLSHLSIH*AGNVRIIISRT
Trigger: TGTTCTTGAGATAATGATCCTCACATTCCCAGCTCAGTGAATGGAAAGATGTGAAAGCCAGTGTAAGAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463390.1
CDS CAA 90 bp TCAGGCATCACAATGAGCAATCCCAAATACGTTGGAGTGATTTGTTaGCAACATCTCTTAAATCTTTTCCTAGAGGTGCTTACAGGCAGG +
Preference number: 6 (lower is better)
Translates to: SGITMSNPKYVGVIC*QHLLNLFLEVLTGR
Trigger: CCTGCCTGTAAGCACCTCTAGGAAAAGATTTAAGAGATGTTGCAAACAAATCACTCCAACGTATTTGGGATTGCTCATTGTGATGCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS TCA 72 bp CTGATGACAAGTCACGCTAAGTTTCTTTTGGGATGCTaGAAAACTTCACTCTGCCTAACATCTAAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: LMTSHAKFLLGC*KTSLCLTSKPS
Trigger: AGAAGGCTTAGATGTTAGGCAGAGTGAAGTTTTTCAGCATCCCAAAAGAAACTTAGCGTGACTTGTCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463390.1
CDS CAA 90 bp CAGATCAGGCATCACAATGAGCAATCCCAAATACGTTGGAGTGATTaGTTTGCAACATCTCTTAAATCTTTTCCTAGAGGTGCTTACAGG +
Preference number: 6 (lower is better)
Translates to: QIRHHNEQSQIRWSD*FATSLKSFPRGAYR
Trigger: CCTGTAAGCACCTCTAGGAAAAGATTTAAGAGATGTTGCAAACAAATCACTCCAACGTATTTGGGATTGCTCATTGTGATGCCTGATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS CCA 72 bp CTTACACTGGCTTTCACATCTTTCCATTCACTGAGCTaGGAATGTGAGGATCATTATCTCAAGAACACAAAT +
Preference number: 6 (lower is better)
Translates to: LTLAFTSFHSLS*ECEDHYLKNTN
Trigger: ATTTGTGTTCTTGAGATAATGATCCTCACATTCCCAGCTCAGTGAATGGAAAGATGTGAAAGCCAGTGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463390.1
CDS GCA 72 bp CCCTACTTAAAAGACAGAAATGTCAAACACCATGCATaGCTCAGATCTGCTATAAATAATATGTGTGCAGAG +
Preference number: 6 (lower is better)
Translates to: PYLKDRNVKHHA*LRSAINNMCAE
Trigger: CTCTGCACACATATTATTTATAGCAGATCTGAGGCATGCATGGTGTTTGACATTTCTGTCTTTTAAGTAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448602.5
CDS CAA 90 bp ATATGGGGTCACTCATCTAAAGGTAATCCCTCCGTATTTGTGAGTTaGAAATTAACATTGAGTAGGAAACACACAATATCTGAAAAGGGG +
Preference number: 6 (lower is better)
Translates to: IWGHSSKGNPSVFVS*KLTLSRKHTISEKG
Trigger: CCCCTTTTCAGATATTGTGTGTTTCCTACTCAATGTTAATTTCAAACTCACAAATACGGAGGGATTACCTTTAGATGAGTGACCCCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487336.1
CDS TCA 72 bp TATCTCATTGCGGTTCTTTTCTGTGATATAGAAGTTTaGACTATCGGCATGCTGGAGTGCAAAATATTCATG +
Preference number: 6 (lower is better)
Translates to: YLIAVLFCDIEV*TIGMLECKIFM
Trigger: CATGAATATTTTGCACTCCAGCATGCCGATAGTTCAAACTTCTATATCACAGAAAAGAACCGCAATGAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310758.9
ENST00000442504.5
ENST00000448602.5
ENST00000453399.5
ENST00000455119.5
ENST00000455879.5
ENST00000463390.1
CDS CCA 72 bp CAGATCAGGCATCACAATGAGCAATCCCAAATACGTTaGAGTGATTTGTTTGCAACATCTCTTAAATCTTTT +
Preference number: 6 (lower is better)
Translates to: QIRHHNEQSQIR*SDLFATSLKSF
Trigger: AAAAGATTTAAGAGATGTTGCAAACAAATCACTCCAACGTATTTGGGATTGCTCATTGTGATGCCTGATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479447.1
CDS CAA 72 bp CATCACAATGAGCAATCCCAAATACGTTGGAGTGATTaGTTTGCAACATCTCTTAAATCTTTTCCTAGAGGT +
Preference number: 6 (lower is better)
Translates to: HHNEQSQIRWSD*FATSLKSFPRG
Trigger: ACCTCTAGGAAAAGATTTAAGAGATGTTGCAAACAAATCACTCCAACGTATTTGGGATTGCTCATTGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479447.1