Pregenerated sensors for ELL3 (Homo sapiens)
Ensembl gene IDs: ENSG00000128886Ensembl transcript IDs: ENST00000319359.8, ENST00000433927.1, ENST00000467869.5, ENST00000476335.1, ENST00000486851.5, ENST00000497465.1, ENST00000497530.5, ENST00000497700.1
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAACCAAACCTCAAGAACCTAGAGCAGCTCTCTACTTGCCACCATaGACTCCAGTGGTCAGCATAAGAAAAGCAGATAGTTGCATTCTA | + |
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Preference number: 1 (lower is better) Translates to: KTKPQEPRAALYLPP*TPVVSIRKADSCIL Trigger: TAGAATGCAACTATCTGCTTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGTTCTTGAGGTTTGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| 3UTR-3UTR CAA 90 bp | ACTTTTCCTAGACTCCTAGGCACAGCTATGGAGTCTTTGCACAGTGCCCATACCAGCTGCTTTGTTCCTTaGTGTTTCACTAAGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: TFPRLLGTAMESLHSAHTSCFVP*CFTKQR Trigger: CCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCT...GGTATGGGCACTGTGCAAAGACTCCATAGCTGTGCCTAGGAGTCTAGGAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | GCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAAGCAGATCCAGACGTTTCCGGCTaGCAGAGGAAGGCAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: AALYLPPWTPVVSIRKADPDVSG*QRKAVP Trigger: AGGCACTGCCTTCCTCTGCCAGCCGGAAACGTCTGG...ATCTGCTTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | ACTTTTCCTAGACTCCTAGGCACAGCTATGGAGTCTTTGCACAGTGCCCATACCGTCAGGTTGTGTCCCTaGACTGATGATGGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TFPRLLGTAMESLHSAHTVRLCP*TDDGAG Trigger: CCCAGCCCCATCATCAGTTCAGGGACACAACCTGAC...GGTATGGGCACTGTGCAAAGACTCCATAGCTGTGCCTAGGAGTCTAGGAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | ACTTTTCCTAGACTCCTAGGCACAGCTATGGAGTCTTTGCACAGTGCCCATACCCCTGGAGCTCCTCCATaGCGACGAGTTCGAGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: TFPRLLGTAMESLHSAHTPGAPP*RRVRVQ Trigger: TTGCACTCGAACTCGTCGCCATGGAGGAGCTCCAGG...GGTATGGGCACTGTGCAAAGACTCCATAGCTGTGCCTAGGAGTCTAGGAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR GCA 90 bp | TTCATTTTCAGTACATGGGTAACACCCAGGCCCTTTCCCATTATATCCAGGTATGGCGACGAGTTCGAGTaGAAGCAGCACGGGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FIFSTWVTPRPFPIISRYGDEFE*KQHGGH Trigger: GTGGCCCCCGTGCTGCTTGCACTCGAACTCGTCGCC...ATACCTGGATATAATGGGAAAGGGCCTGGGTGTTACCCATGTACTGAAAATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | ACATGGGTAACACCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTGGACCAACCAGGGCCTaGGAGTCTCAGATACCCTCG | + |
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Preference number: 4 (lower is better) Translates to: TWVTPRPFPIISRYATSSGPTRA*ESQIPS Trigger: CGAGGGTATCTGAGACTCCCAGGCCCTGGTTGGTCC...AGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGGTGTTACCCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | CCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATTCCGGGCAGCTTGCGTaGAGCAGAGCCGGAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PRPFPIISRYATSSFNSYSGQLA*SRAGAV Trigger: GACAGCTCCGGCTCTGCTTCACGCAAGCTGCCCGGA...ATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | TGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATTCCCTTGATAACGAGGCGCTCCCTGAGTaGGCCCAGGCAGTGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: CFVPLCFTKQRLKNSLDNEALPE*AQAVEA Trigger: AGCCTCCACTGCCTGGGCTCACTCAGGGAGCGCCTC...GTTATCAAGGGAATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | ACTTTTCCTAGACTCCTAGGCACAGCTATGGAGTCTTTGCACAGTGCCCATACCAGTGGCTACAGGCACTaGACGTTTCTTGTCCAGACG | + |
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Preference number: 4 (lower is better) Translates to: TFPRLLGTAMESLHSAHTSGYRH*TFLVQT Trigger: CGTCTGGACAAGAAACGTTCAGTGCCTGTAGCCACT...GGTATGGGCACTGTGCAAAGACTCCATAGCTGTGCCTAGGAGTCTAGGAAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | GCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAAGCAGATGGGAGTGACTGTCCTTaGTTGCTTGCCAGTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: AALYLPPWTPVVSIRKADGSDCP*LLASGS Trigger: AGATCCACTGGCAAGCAACCAAGGACAGTCACTCCC...ATCTGCTTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | GCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAAGCAGATTGCTGTTCTGCACTGTaGATGGCCCTGTATTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AALYLPPWTPVVSIRKADCCSAL*MALYCR Trigger: CCTGCAATACAGGGCCATCCACAGTGCAGAACAGCA...ATCTGCTTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | GGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATCAGACGTACCTGTTGCCGCTaGCACTCTTGCAGCGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: GPFPLYPGMLQVLLTLIRRTCCR*HSCSAR Trigger: GCGGGCGCTGCAAGAGTGTCAGCGGCAACAGGTACG...TCTGATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR GCA 90 bp | ACTTTTCCTAGACTCCTAGGCACAGCTATGGAGTCTTTGCACAGTGCCCATACCCACGGGCATGCAGGATaGGGTATTCAGCATAATCTG | + |
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Preference number: 4 (lower is better) Translates to: TFPRLLGTAMESLHSAHTHGHAG*GIQHNL Trigger: CAGATTATGCTGAATACCGCATCCTGCATGCCCGTG...GGTATGGGCACTGTGCAAAGACTCCATAGCTGTGCCTAGGAGTCTAGGAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | ACTTTTCCTAGACTCCTAGGCACAGCTATGGAGTCTTTGCACAGTGCCCATACCCAGGACCTTGTATTCTaGAGTTCCTCGCCGAACTCT | + |
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Preference number: 4 (lower is better) Translates to: TFPRLLGTAMESLHSAHTQDLVF*SSSPNS Trigger: AGAGTTCGGCGAGGAACTCCAGAATACAAGGTCCTG...GGTATGGGCACTGTGCAAAGACTCCATAGCTGTGCCTAGGAGTCTAGGAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR GCA 90 bp | GGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATCAGACTAGTCCGGGCAGCTTaGGTGAAGCAGAGCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GPFPLYPGMLQVLLTLIRLVRAA*VKQSRS Trigger: GCTCCGGCTCTGCTTCACGCAAGCTGCCCGGACTAG...TCTGATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATAGTGAGCCCAGGCAGTaGAGGCTGTTAGGCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: PRPFPIISRYATSSFNSYSEPRQ*RLLGPD Trigger: GTCTGGGCCTAACAGCCTCCACTGCCTGGGCTCACT...ATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | GGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATCAGACCACCAGCGCCCTCCTaGCAACACTGGGACACTATG | + |
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Preference number: 4 (lower is better) Translates to: GPFPLYPGMLQVLLTLIRPPAPS*QHWDTM Trigger: CATAGTGTCCCAGTGTTGTCAGGAGGGCGCTGGTGG...TCTGATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR GCA 90 bp | ACTTTTCCTAGACTCCTAGGCACAGCTATGGAGTCTTTGCACAGTGCCCATACCCTTGATAACTTCAGCTaGCCCTGTTCTTTTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: TFPRLLGTAMESLHSAHTLDNFS*PCSFPQ Trigger: TTGAGGAAAAGAACAGGGGCAGCTGAAGTTATCAAG...GGTATGGGCACTGTGCAAAGACTCCATAGCTGTGCCTAGGAGTCTAGGAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR GCA 90 bp | CCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATGAGCAGCTCTCTACTTaGCACCATGGACTCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: PRPFPIISRYATSSFNSYEQLST*HHGLQW Trigger: CCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTC...ATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | TGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATTCCCTTGATAACTACCCTCGGTGGCCTTaGAAAGCAATCACCGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: CFVPLCFTKQRLKNSLDNYPRWP*KAITGR Trigger: ACGGCCGGTGATTGCTTTCCAAGGCCACCGAGGGTA...GTTATCAAGGGAATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | TTCATTTTCAGTACATGGGTAACACCCAGGCCCTTTCCCATTATATCCAGGTATCTCAGATACCCTCGGTaGCCTTGGAAAGCAATCACC | + |
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Preference number: 4 (lower is better) Translates to: FIFSTWVTPRPFPIISRYLRYPR*PWKAIT Trigger: GGTGATTGCTTTCCAAGGCCACCGAGGGTATCTGAG...ATACCTGGATATAATGGGAAAGGGCCTGGGTGTTACCCATGTACTGAAAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | GCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAAGCAGATTTCATTTTCAGTACATaGGTAACACCCAGGCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: AALYLPPWTPVVSIRKADFIFST*VTPRPF Trigger: AAAGGGCCTGGGTGTTACCCATGTACTGAAAATGAA...ATCTGCTTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | CCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATGAGGAAGGCAGTGCCTaGACAGGTTCTCTGTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: PRPFPIISRYATSSFNSYEEGSA*TGSLFG Trigger: TCCAAACAGAGAACCTGTTCAGGCACTGCCTTCCTC...ATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | ACTTTTCCTAGACTCCTAGGCACAGCTATGGAGTCTTTGCACAGTGCCCATACCTTGGGTACTGCTTCCTaGACTTTTTATATTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TFPRLLGTAMESLHSAHTLGTAS*TFYIPG Trigger: TCCAGGAATATAAAAAGTTCAGGAAGCAGTACCCAA...GGTATGGGCACTGTGCAAAGACTCCATAGCTGTGCCTAGGAGTCTAGGAAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | CCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATTGGGACAATTTCTGGTaGAGGTACTCACAGCGACGC | + |
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Preference number: 4 (lower is better) Translates to: PRPFPIISRYATSSFNSYWDNFW*RYSQRR Trigger: GCGTCGCTGTGAGTACCTTCACCAGAAATTGTCCCA...ATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR GCA 90 bp | TTCATTTTCAGTACATGGGTAACACCCAGGCCCTTTCCCATTATATCCAGGTATGTGACTGTCCTTGGTTaGTTGCCAGTGGATCTGACA | + |
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Preference number: 4 (lower is better) Translates to: FIFSTWVTPRPFPIISRYVTVLG*LPVDLT Trigger: TGTCAGATCCACTGGCAAGCAACCAAGGACAGTCAC...ATACCTGGATATAATGGGAAAGGGCCTGGGTGTTACCCATGTACTGAAAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | TACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAAGCAGATAGTTGCATTTTTGGAACATGGGTCTaGCTTCTCACTTCCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: YLPPWTPVVSIRKADSCIFGTWV*LLTSHC Trigger: ACAGTGGGAAGTGAGAAGCCAGACCCATGTTCCAAA...AATGCAACTATCTGCTTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| 3UTR CAA 72 bp | AAAACCAAACCTCAAGAACCTAGAGCAGCTCTCTACTaGCCACCATGGACTCCAGTGGTCAGCATAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: KTKPQEPRAALY*PPWTPVVSIRK Trigger: TTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGTTCTTGAGGTTTGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | TGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATTCCCTTGATAACAACACTGGGACACTATaGAGGAGAAGAGGCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: CFVPLCFTKQRLKNSLDNNTGTL*RRRGRT Trigger: GGTCCTGCCTCTTCTCCTTCATAGTGTCCCAGTGTT...GTTATCAAGGGAATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR GCA 90 bp | GGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATCAGAGGCAGAGGAAGGCAGTaGCTGAACAGGTTCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: GPFPLYPGMLQVLLTLIRGRGRQ*LNRFSV Trigger: AACAGAGAACCTGTTCAGGCACTGCCTTCCTCTGCC...TCTGATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR GCA 90 bp | CCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATTATGAACCTTTGGCTTaGAGTCCCAACACGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: PRPFPIISRYATSSFNSYYEPLA*SPNTGM Trigger: CATGCCCGTGTTGGGACTGCAAGCCAAAGGTTCATA...ATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | TTCATTTTCAGTACATGGGTAACACCCAGGCCCTTTCCCATTATATCCAGGTATTCTCTGTTTGGAACATaGGTCTGGCTTCTCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: FIFSTWVTPRPFPIISRYSLFGT*VWLLTS Trigger: GGAAGTGAGAAGCCAGACCCATGTTCCAAACAGAGA...ATACCTGGATATAATGGGAAAGGGCCTGGGTGTTACCCATGTACTGAAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | TTCATTTTCAGTACATGGGTAACACCCAGGCCCTTTCCCATTATATCCAGGTATCTTCCAGTTCTACAGTaGCTACAGGCACTGAACGTT | + |
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Preference number: 4 (lower is better) Translates to: FIFSTWVTPRPFPIISRYLPVLQ*LQALNV Trigger: AACGTTCAGTGCCTGTAGCCACTGTAGAACTGGAAG...ATACCTGGATATAATGGGAAAGGGCCTGGGTGTTACCCATGTACTGAAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | ACATGGGTAACACCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTAACTGTGTTCTAATCTaGGGTCCATGTCCTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: TWVTPRPFPIISRYATSSNCVLI*GPCPHL Trigger: AAGATGAGGACATGGACCCCAGATTAGAACACAGTT...AGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGGTGTTACCCATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | GGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATCAGATGCCATCTGTGGCTGTaGTACTGCATCTCCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GPFPLYPGMLQVLLTLIRCHLWL*YCISFR Trigger: TCTGAAGGAGATGCAGTATCACAGCCACAGATGGCA...TCTGATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | GGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATCAGACCCTCTTGTAAATCCTaGTTGGTCAGGCCTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GPFPLYPGMLQVLLTLIRPSCKS*LVRPCR Trigger: CCTACAAGGCCTGACCAATCAGGATTTACAAGAGGG...TCTGATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR GCA 90 bp | CCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATGATAGAATCCATGGCTaGCCAAATAATGAGGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: PRPFPIISRYATSSFNSYDRIHG*PNNEAL Trigger: GAGCGCCTCATTATTTGGGCAGCCATGGATTCTATC...ATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR GCA 90 bp | TTAGTTTATAGCTGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATGTCCCAACACGGGCATaGAGGATGCGGTATTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LVYSCFVPLCFTKQRLKNVPTRA*RMRYSA Trigger: TGCTGAATACCGCATCCTGCATGCCCGTGTTGGGAC...ATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATAACAGGTTCTCTGTTTaGAACATGGGTCTGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PRPFPIISRYATSSFNSYNRFSV*NMGLAS Trigger: AGAAGCCAGACCCATGTTCCAAACAGAGAACCTGTT...ATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | TTAGTTTATAGCTGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATCTTGTAAATCCTGATTaGTCAGGCCTTGTAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LVYSCFVPLCFTKQRLKNLVNPD*SGLVGG Trigger: GCCCCCTACAAGGCCTGACCAATCAGGATTTACAAG...ATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | TTAGTTTATAGCTGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATAGCTCTATGAACCTTTaGCTTGCAGTCCCAACACGG | + |
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Preference number: 4 (lower is better) Translates to: LVYSCFVPLCFTKQRLKNSSMNL*LAVPTR Trigger: CCGTGTTGGGACTGCAAGCCAAAGGTTCATAGAGCT...ATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | TTCATTTTCAGTACATGGGTAACACCCAGGCCCTTTCCCATTATATCCAGGTATTATATCTTCAGGACTTaGGGATTCAGAATCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: FIFSTWVTPRPFPIISRYYIFRT*GFRIFL Trigger: CAAGAAGATTCTGAATCCCCAAGTCCTGAAGATATA...ATACCTGGATATAATGGGAAAGGGCCTGGGTGTTACCCATGTACTGAAAATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR GCA 90 bp | TTAGTTTATAGCTGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATATGTCCTCATCTTCTTaGTCCCAATCTTCTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LVYSCFVPLCFTKQRLKNMSSSS*SQSSPS Trigger: AGAGGGAGAAGATTGGGAGCAAGAAGATGAGGACAT...ATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR CCA 90 bp | TTAGTTTATAGCTGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATAACTCTCAGGATGTCTaGCATCTTCAGTCAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LVYSCFVPLCFTKQRLKNNSQDV*HLQSGC Trigger: ACAACCTGACTGAAGATGCCAGACATCCTGAGAGTT...ATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR TCA 90 bp | TTAGTTTATAGCTGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATGATTCAGAATCTTCTTaGACTGAGGAACTGTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LVYSCFVPLCFTKQRLKNDSESS*TEELCS Trigger: AGAACACAGTTCCTCAGTTCAAGAAGATTCTGAATC...ATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
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| CDS-3UTR GCA 90 bp | TTAGTTTATAGCTGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATAACTCTTTTAATCTCTaGTCCCAGCTCTATGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LVYSCFVPLCFTKQRLKNNSFNL*SQLYEP Trigger: AGGTTCATAGAGCTGGGAGCAGAGATTAAAAGAGTT...ATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| 3UTR CAA 72 bp | GTTGCATTCTATTTAGTTTATAGCTGCTTTGTTCCTTaGTGTTTCACTAAGCAGAGGCTCAAAAATTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAFYLVYSCFVP*CFTKQRLKNSL Trigger: AAGGGAATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAAATAGAATGCAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS CCA 90 bp | AGCAGAGCCGGAGCTGTCCTCTCAGAGGCTCCTGGAGCTCCTCCATaGCGACGAGTTCGAGTGCAAGCAGCACGGGGGCCACAGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRAGAVLSEAPGAPP*RRVRVQAARGPQAR Trigger: CCTCGCCTGTGGCCCCCGTGCTGCTTGCACTCGAACTCGTCGCCATGGAGGAGCTCCAGGAGCCTCTGAGAGGACAGCTCCGGCTCTGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000486851.5 ENST00000497700.1 |
||
| CDS GCA 90 bp | GCAGCGTCGTTGAGCCTGAGCAGTAAGAGGCTAGTCCGGGCAGCTTaGGTGAAGCAGAGCCGGAGCTGTCCTCTCAGAGGCTCCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AASLSLSSKRLVRAA*VKQSRSCPLRGSWS Trigger: GCTCCAGGAGCCTCTGAGAGGACAGCTCCGGCTCTGCTTCACGCAAGCTGCCCGGACTAGCCTCTTACTGCTCAGGCTCAACGACGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000486851.5 ENST00000497700.1 |
||
| CDS TCA 90 bp | CAGCCCACGTTTATGCTCCCTCGCCCTCACCTCGCTCACACACCCTaGGCTCGCACTTACCCCTCGGTGGCCTTGGAAAGCAATCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: QPTFMLPRPHLAHTP*ARTYPSVALESNHR Trigger: CCGGTGATTGCTTTCCAAGGCCACCGAGGGGTAAGTGCGAGCTCAGGGTGTGTGAGCGAGGTGAGGGCGAGGGAGCATAAACGTGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497700.1 |
||
| CDS TCA 90 bp | TCCTCGCCCCACTTGGAGTTCAGTTATCGGAACTACCTCAGACCGTaGCTACTCGCAGCCTCCGGCCCCGACCGCACCTTCCACCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPHLEFSYRNYLRP*LLAASGPDRTFHLQ Trigger: CTGGAGGTGGAAGGTGCGGTCGGGGCCGGAGGCTGCGAGTAGTCACGGTCTGAGGTAGTTCCGATAACTGAACTCCAAGTGGGGCGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497700.1 |
||
| CDS TCA 90 bp | GGTCCAAGCTACCACCAGCGCCCTCCTGACAACACTGGGACACTATaGAGGAGAAGAGGCAGGACCAACCAGGGCCTGGGAGTCTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GPSYHQRPPDNTGTL*RRRGRTNQGLGVSD Trigger: ATCTGAGACTCCCAGGCCCTGGTTGGTCCTGCCTCTTCTCCTTCATAGTGTCCCAGTGTTGTCAGGAGGGCGCTGGTGGTAGCTTGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000467869.5 ENST00000476335.1 ENST00000486851.5 ENST00000497530.5 |
||
| CDS TCA 90 bp | TGGGATAGAATCCATGGCTGCCCAAATAATGAGGCGCTCCCTGAGTaGGCCCAGGCAGTGGAGGCTGTTAGGCCCAGACCTGAGGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: WDRIHGCPNNEALPE*AQAVEAVRPRPEEA Trigger: CGCTTCCTCAGGTCTGGGCCTAACAGCCTCCACTGCCTGGGCTCACTCAGGGAGCGCCTCATTATTTGGGCAGCCATGGATTCTATCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000467869.5 ENST00000476335.1 ENST00000486851.5 ENST00000497530.5 |
||
| CDS TCA 90 bp | GCCACCACCGCCACCTCCTCTCGGCGCTTTCTTCTAGGATCCGCATaGATCGCTTTGGGCTATCGGAAGAGCTATCCCCAGTTCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ATTATSSRRFLLGSA*IALGYRKSYPQFSG Trigger: TCCCGAGAACTGGGGATAGCTCTTCCGATAGCCCAAAGCGATTCATGCGGATCCTAGAAGAAAGCGCCGAGAGGAGGTGGCGGTGGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433927.1 |
||
| CDS TCA 90 bp | AGGAAGCGTTGGCACACAAGGTCCAAGCTACCACCAGCGCCCTCCTaGCAACACTGGGACACTATGAAGGAGAAGAGGCAGGACCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: RKRWHTRSKLPPAPS*QHWDTMKEKRQDQP Trigger: TGGTTGGTCCTGCCTCTTCTCCTTCATAGTGTCCCAGTGTTGTCAGGAGGGCGCTGGTGGTAGCTTGGACCTTGTGTGCCAACGCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000467869.5 ENST00000476335.1 ENST00000486851.5 ENST00000497530.5 |
||
| CDS CCA 90 bp | CACTGTGCCATGTGCTCCCTTGAGGATCCTGGGAGTGACTGTCCTTaGTTGCTTGCCAGTGGATCTGACACTGACACCTCCTCTAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HCAMCSLEDPGSDCP*LLASGSDTDTSSSA Trigger: GGCACTAGAGGAGGTGTCAGTGTCAGATCCACTGGCAAGCAACCAAGGACAGTCACTCCCAGGATCCTCAAGGGAGCACATGGCACAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000486851.5 ENST00000497530.5 |
||
| CDS-3UTR CAA 90 bp | ACATGGGTAACACCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTGCCGCTGACACTCTaGCAGCGCCCGCAGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TWVTPRPFPIISRYATSSLPLTL*QRPQGS Trigger: GCTGCCCTGCGGGCGCTGCAAGAGTGTCAGCGGCAA...AGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGGTGTTACCCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS CCA 90 bp | CCTCGCCGAACTCTTTTAATCTCTGCTCCCAGCTCTATGAACCTTTaGCTTGCAGTCCCAACACGGGCATGCAGGATGCGGTATTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRRTLLISAPSSMNL*LAVPTRACRMRYSA Trigger: TGCTGAATACCGCATCCTGCATGCCCGTGTTGGGACTGCAAGCCAAAGGTTCATAGAGCTGGGAGCAGAGATTAAAAGAGTTCGGCGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497465.1 |
||
| CDS GCA 90 bp | CAGGACCTTGTATTCTGGAGTTCCTCGCCGAACTCTTTTAATCTCTaGTCCCAGCTCTATGAACCTTTGGCTTGCAGTCCCAACACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QDLVFWSSSPNSFNL*SQLYEPLACSPNTG Trigger: GCCCGTGTTGGGACTGCAAGCCAAAGGTTCATAGAGCTGGGAGCAGAGATTAAAAGAGTTCGGCGAGGAACTCCAGAATACAAGGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497465.1 |
||
| CDS CCA 90 bp | CTCCTTCAGAATAGCCTCCTGTGTTCTGCCAACTCTCAGGATGTCTaGCATCTTCAGTCAGGTTGTGTCCCTGAACTGATGATGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLQNSLLCSANSQDV*HLQSGCVPELMMGL Trigger: CAGCCCCATCATCAGTTCAGGGACACAACCTGACTGAAGATGCCAGACATCCTGAGAGTTGGCAGAACACAGGAGGCTATTCTGAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000467869.5 ENST00000476335.1 ENST00000486851.5 ENST00000497530.5 |
||
| CDS-3UTR CAA 90 bp | ACTTTTCCTAGACTCCTAGGCACAGCTATGGAGTCTTTGCACAGTGCCCATACCAGAGCAGCTCTCTACTaGCCACCATGGACTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFPRLLGTAMESLHSAHTRAALY*PPWTPV Trigger: CACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCT...GGTATGGGCACTGTGCAAAGACTCCATAGCTGTGCCTAGGAGTCTAGGAAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS TCA 90 bp | TGCCAACTCTCAGGATGTCTGGCATCTTCAGTCAGGTTGTGTCCCTaGACTGATGATGGGGCTGGGATAGAATCCATGGCTGCCCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: CQLSGCLASSVRLCP*TDDGAGIESMAAQI Trigger: TATTTGGGCAGCCATGGATTCTATCCCAGCCCCATCATCAGTTCAGGGACACAACCTGACTGAAGATGCCAGACATCCTGAGAGTTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000467869.5 ENST00000476335.1 ENST00000486851.5 ENST00000497530.5 |
||
| CDS-3UTR CAA 90 bp | GCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAAGCAGATACTGTCCTTGGTTGCTaGCCAGTGGATCTGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: AALYLPPWTPVVSIRKADTVLGC*PVDLTL Trigger: CAGTGTCAGATCCACTGGCAAGCAACCAAGGACAGT...ATCTGCTTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS GCA 90 bp | CCGAACTCTTTTAATCTCTGCTCCCAGCTCTATGAACCTTTGGCTTaGAGTCCCAACACGGGCATGCAGGATGCGGTATTCAGCATAATC | + |
|
Preference number: 5 (lower is better) Translates to: PNSFNLCSQLYEPLA*SPNTGMQDAVFSII Trigger: GATTATGCTGAATACCGCATCCTGCATGCCCGTGTTGGGACTGCAAGCCAAAGGTTCATAGAGCTGGGAGCAGAGATTAAAAGAGTTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497465.1 |
||
| CDS-3UTR CAA 90 bp | ACTTTTCCTAGACTCCTAGGCACAGCTATGGAGTCTTTGCACAGTGCCCATACCGAACAGGTTCTCTGTTaGGAACATGGGTCTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TFPRLLGTAMESLHSAHTEQVLC*EHGSGF Trigger: GAAGCCAGACCCATGTTCCAAACAGAGAACCTGTTC...GGTATGGGCACTGTGCAAAGACTCCATAGCTGTGCCTAGGAGTCTAGGAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS TCA 90 bp | ATGTCCTCATCTTCTTGCTCCCAATCTTCTCCCTCTTGTAAATCCTaGTTGGTCAGGCCTTGTAGGGGGCTTGGCACTAAAGGCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: MSSSSCSQSSPSCKS*LVRPCRGLGTKGRV Trigger: AACTCTGCCTTTAGTGCCAAGCCCCCTACAAGGCCTGACCAATCAGGATTTACAAGAGGGAGAAGATTGGGAGCAAGAAGATGAGGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497465.1 |
||
| CDS-3UTR CAA 90 bp | GGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATCAGACACCGGCCGTACCTGTaGCCGCTGACACTCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPFPLYPGMLQVLLTLIRHRPYL*PLTLLQ Trigger: CTGCAAGAGTGTCAGCGGCAACAGGTACGGCCGGTG...TCTGATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | TACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAAGCAGATAGTTGCATTAGACCTGAGGAAGCGTaGGCACACAAGGTCCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YLPPWTPVVSIRKADSCIRPEEA*AHKVQA Trigger: AGCTTGGACCTTGTGTGCCAACGCTTCCTCAGGTCT...AATGCAACTATCTGCTTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGGTAACACCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTAGTGACTGTCCTTGGTaGCTTGCCAGTGGATCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TWVTPRPFPIISRYATSSSDCPW*LASGSD Trigger: GTCAGATCCACTGGCAAGCAACCAAGGACAGTCACT...AGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGGTGTTACCCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGGTAACACCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTGTGGATGGCCCTGTATaGCAGGAGGTAGTCTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TWVTPRPFPIISRYATSSVDGPV*QEVVWY Trigger: ATACCAGACTACCTCCTGCAATACAGGGCCATCCAC...AGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGGTGTTACCCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS GCA 90 bp | AGCATAATCTGTCTCAAAGTCCTGCTCATAGGCATGTTGCTGTTCTaGACTGTGGATGGCCCTGTATTGCAGGAGGTAGTCTGGTATATC | + |
|
Preference number: 5 (lower is better) Translates to: SIICLKVLLIGMLLF*TVDGPVLQEVVWYI Trigger: GATATACCAGACTACCTCCTGCAATACAGGGCCATCCACAGTGCAGAACAGCAACATGCCTATGAGCAGGACTTTGAGACAGATTATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497465.1 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTATAGCTGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATGCTAGTCCGGGCAGCTaGCGTGAAGCAGAGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVYSCFVPLCFTKQRLKNASPGS*REAEPE Trigger: CTCCGGCTCTGCTTCACGCAAGCTGCCCGGACTAGC...ATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGGTAACACCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTCTGCTCATAGGCATGTaGCTGTTCTGCACTGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TWVTPRPFPIISRYATSSLLIGM*LFCTVD Trigger: ATCCACAGTGCAGAACAGCAACATGCCTATGAGCAG...AGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGGTGTTACCCATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTATAGCTGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATCGCAGGGCAGCGTCGTaGAGCCTGAGCAGTAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVYSCFVPLCFTKQRLKNRRAAS*SLSSKR Trigger: CCTCTTACTGCTCAGGCTCAACGACGCTGCCCTGCG...ATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATTCCCTTGATAACGTGCCATGTGCTCCCTaGAGGATCCTGGGAGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: CFVPLCFTKQRLKNSLDNVPCAP*RILGVT Trigger: AGTCACTCCCAGGATCCTCAAGGGAGCACATGGCAC...GTTATCAAGGGAATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTATAGCTGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATATACCCTCGGTGGCCTaGGAAAGCAATCACCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LVYSCFVPLCFTKQRLKNIPSVA*ESNHRP Trigger: CGGCCGGTGATTGCTTTCCAAGGCCACCGAGGGTAT...ATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATCAGAGGCACTGAACGTTTCTaGTCCAGACGTTTCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPFPLYPGMLQVLLTLIRGTERF*SRRFRL Trigger: CAGCCGGAAACGTCTGGACAAGAAACGTTCAGTGCC...TCTGATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | TACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAAGCAGATAGTTGCATTGGCTCAAAAATTCCCTaGATAACTTCAGCTGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: YLPPWTPVVSIRKADSCIGSKIP*ITSAAP Trigger: AGGGGCAGCTGAAGTTATCAAGGGAATTTTTGAGCC...AATGCAACTATCTGCTTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATACAGCTATGGAGTCTTaGCACAGTGCCCATACCCTA | + |
|
Preference number: 5 (lower is better) Translates to: PRPFPIISRYATSSFNSYTAMES*HSAHTL Trigger: TAGGGTATGGGCACTGTGCAAAGACTCCATAGCTGT...ATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCTTTCCCATTATATCCAGGTATGCTACAAGTTCTTTTAACTCTTATCAGACATGTCCTCATCTTCTaGCTCCCAATCTTCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPFPLYPGMLQVLLTLIRHVLIF*LPIFSL Trigger: GAGGGAGAAGATTGGGAGCAAGAAGATGAGGACATG...TCTGATAAGAGTTAAAAGAACTTGTAGCATACCTGGATATAATGGGAAAGGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTATAGCTGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATTTGTCTTCCAGGACCTaGTATTCTGGAGTTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LVYSCFVPLCFTKQRLKNLSSRT*YSGVPR Trigger: GCGAGGAACTCCAGAATACAAGGTCCTGGAAGACAA...ATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATTCCCTTGATAACAGCTGCTTTGTTCCTTaGTGTTTCACTAAGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CFVPLCFTKQRLKNSLDNSCFVP*CFTKQR Trigger: CCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCT...GTTATCAAGGGAATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGTTCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATTCCCTTGATAACTATTCCTGGATTATCTaGTCTTCCAGGACCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: CFVPLCFTKQRLKNSLDNYSWII*SSRTLY Trigger: ATACAAGGTCCTGGAAGACAAGATAATCCAGGAATA...GTTATCAAGGGAATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319359.8 |
||
| CDS GCA 72 bp | AGGCTCCTGGAGCTCCTCCATGGCGACGAGTTCGAGTaGAAGCAGCACGGGGGCCACAGGCGAGGGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: RLLELLHGDEFE*KQHGGHRRGPP Trigger: TGGTGGCCCTCGCCTGTGGCCCCCGTGCTGCTTGCACTCGAACTCGTCGCCATGGAGGAGCTCCAGGAGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000486851.5 ENST00000497700.1 |
||
| CDS CCA 72 bp | CCAGGGCCTGGGAGTCTCAGATACCCTCGGTGGCCTTaGAAAGCAATCACCGGCCGTACCTGCGGGGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGPGSLRYPRWP*KAITGRTCGES Trigger: GCTCTCCCCGCAGGTACGGCCGGTGATTGCTTTCCAAGGCCACCGAGGGTATCTGAGACTCCCAGGCCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476335.1 |
||
| CDS CAA 72 bp | AGCAATCACCGGCCGTACCTGTTGCCGCTGACACTCTaGCAGCGCCCGCAGGGCAGCGTCGTTGAGCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SNHRPYLLPLTL*QRPQGSVVEPE Trigger: CTCAGGCTCAACGACGCTGCCCTGCGGGCGCTGCAAGAGTGTCAGCGGCAACAGGTACGGCCGGTGATTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000486851.5 ENST00000497700.1 |
||
| CDS GCA 72 bp | TTGAGCCTGAGCAGTAAGAGGCTAGTCCGGGCAGCTTaGGTGAAGCAGAGCCGGAGCTGTCCTCTCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLSSKRLVRAA*VKQSRSCPLRG Trigger: GCCTCTGAGAGGACAGCTCCGGCTCTGCTTCACGCAAGCTGCCCGGACTAGCCTCTTACTGCTCAGGCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000486851.5 ENST00000497700.1 |
||
| CDS CCA 72 bp | TCGCTCACACACCCTGAGCTCGCACTTACCCCTCGGTaGCCTTGGAAAGCAATCACCGGCCGTACCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLTHPELALTPR*PWKAITGRTCC Trigger: GCAACAGGTACGGCCGGTGATTGCTTTCCAAGGCCACCGAGGGGTAAGTGCGAGCTCAGGGTGTGTGAGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497700.1 |
||
| CDS TCA 72 bp | CACTTGGAGTTCAGTTATCGGAACTACCTCAGACCGTaGCTACTCGCAGCCTCCGGCCCCGACCGCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HLEFSYRNYLRP*LLAASGPDRTF Trigger: GAAGGTGCGGTCGGGGCCGGAGGCTGCGAGTAGTCACGGTCTGAGGTAGTTCCGATAACTGAACTCCAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497700.1 |
||
| CDS TCA 72 bp | TGGCACACAAGGTCCAAGCTACCACCAGCGCCCTCCTaGCAACACTGGGACACTATGAAGGAGAAGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WHTRSKLPPAPS*QHWDTMKEKRQ Trigger: CTGCCTCTTCTCCTTCATAGTGTCCCAGTGTTGTCAGGAGGGCGCTGGTGGTAGCTTGGACCTTGTGTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000467869.5 ENST00000476335.1 ENST00000486851.5 ENST00000497530.5 |
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| CDS TCA 72 bp | GCCACCTCCTCTCGGCGCTTTCTTCTAGGATCCGCATaGATCGCTTTGGGCTATCGGAAGAGCTATCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: ATSSRRFLLGSA*IALGYRKSYPQ Trigger: CTGGGGATAGCTCTTCCGATAGCCCAAAGCGATTCATGCGGATCCTAGAAGAAAGCGCCGAGAGGAGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433927.1 |
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| CDS CAA 90 bp | TGTGCCATGTGCTCCCTTGAGGATCCTGGGAGTGACTGTCCTTGGTaGCTTGCCAGTGGATCTGACACTGACACCTCCTCTAGTGCCATC | + |
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Preference number: 6 (lower is better) Translates to: CAMCSLEDPGSDCPW*LASGSDTDTSSSAI Trigger: GATGGCACTAGAGGAGGTGTCAGTGTCAGATCCACTGGCAAGCAACCAAGGACAGTCACTCCCAGGATCCTCAAGGGAGCACATGGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000486851.5 ENST00000497530.5 |
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| CDS CAA 90 bp | GAACATGGGTCTGGCTTCTCACTTCCCACTGTGCCATGTGCTCCCTaGAGGATCCTGGGAGTGACTGTCCTTGGTTGCTTGCCAGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: EHGSGFSLPTVPCAP*RILGVTVLGCLPVD Trigger: ATCCACTGGCAAGCAACCAAGGACAGTCACTCCCAGGATCCTCAAGGGAGCACATGGCACAGTGGGAAGTGAGAAGCCAGACCCATGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497530.5 |
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| CDS CAA 90 bp | CACCCCATCCAAAGTACCTCACTTCCCACTGTGCCATGTGCTCCCTaGAGGATCCTGGGAGTGACTGTCCTTGGTTGCTTGCCAGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: HPIQSTSLPTVPCAP*RILGVTVLGCLPVD Trigger: ATCCACTGGCAAGCAACCAAGGACAGTCACTCCCAGGATCCTCAAGGGAGCACATGGCACAGTGGGAAGTGAGGTACTTTGGATGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486851.5 |
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| CDS CCA 72 bp | GGCAGAGGAAGGCAGTGCCTGAACAGGTTCTCTGTTTaGAACATGGGTCTGGCTTCTCACTTCCCACTGTGC | + |
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Preference number: 6 (lower is better) Translates to: GRGRQCLNRFSV*NMGLASHFPLC Trigger: GCACAGTGGGAAGTGAGAAGCCAGACCCATGTTCCAAACAGAGAACCTGTTCAGGCACTGCCTTCCTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497530.5 |
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| CDS CAA 72 bp | TGCTCCCTTGAGGATCCTGGGAGTGACTGTCCTTGGTaGCTTGCCAGTGGATCTGACACTGACACCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: CSLEDPGSDCPW*LASGSDTDTSS Trigger: AGAGGAGGTGTCAGTGTCAGATCCACTGGCAAGCAACCAAGGACAGTCACTCCCAGGATCCTCAAGGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000476335.1 ENST00000486851.5 ENST00000497530.5 |
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| CDS CAA 72 bp | TCTGGCTTCTCACTTCCCACTGTGCCATGTGCTCCCTaGAGGATCCTGGGAGTGACTGTCCTTGGTTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SGFSLPTVPCAP*RILGVTVLGCL Trigger: CAAGCAACCAAGGACAGTCACTCCCAGGATCCTCAAGGGAGCACATGGCACAGTGGGAAGTGAGAAGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497530.5 |
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| CDS CAA 72 bp | TGGCAGAGGAAGGCAGTGCCTGAACAGGTTCTCTGTTaGGAACATGGGTCTGGCTTCTCACTTCCCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: WQRKAVPEQVLC*EHGSGFSLPTV Trigger: CACAGTGGGAAGTGAGAAGCCAGACCCATGTTCCAAACAGAGAACCTGTTCAGGCACTGCCTTCCTCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497530.5 |
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| CDS TCA 72 bp | TCAGGATGTCTGGCATCTTCAGTCAGGTTGTGTCCCTaGACTGATGATGGGGCTGGGATAGAATCCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: SGCLASSVRLCP*TDDGAGIESMA Trigger: AGCCATGGATTCTATCCCAGCCCCATCATCAGTTCAGGGACACAACCTGACTGAAGATGCCAGACATCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000467869.5 ENST00000476335.1 ENST00000486851.5 ENST00000497530.5 |
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| CDS GCA 72 bp | ACCTTTGGCTTGCAGTCCCAACACGGGCATGCAGGATaGGGTATTCAGCATAATCTGTCTCAAAGTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TFGLQSQHGHAG*GIQHNLSQSPA Trigger: AGCAGGACTTTGAGACAGATTATGCTGAATACCGCATCCTGCATGCCCGTGTTGGGACTGCAAGCCAAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497465.1 |
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| CDS GCA 72 bp | TTTAATCTCTGCTCCCAGCTCTATGAACCTTTGGCTTaGAGTCCCAACACGGGCATGCAGGATGCGGTATTC | + |
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Preference number: 6 (lower is better) Translates to: FNLCSQLYEPLA*SPNTGMQDAVF Trigger: GAATACCGCATCCTGCATGCCCGTGTTGGGACTGCAAGCCAAAGGTTCATAGAGCTGGGAGCAGAGATTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497465.1 |
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| CDS CCA 72 bp | CTTGCTCCCAATCTTCTCCCTCTTGTAAATCCTGATTaGTCAGGCCTTGTAGGGGGCTTGGCACTAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LAPNLLPLVNPD*SGLVGGLALKA Trigger: TGCCTTTAGTGCCAAGCCCCCTACAAGGCCTGACCAATCAGGATTTACAAGAGGGAGAAGATTGGGAGCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497465.1 |
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| CDS GCA 72 bp | GTATTCTGGAGTTCCTCGCCGAACTCTTTTAATCTCTaGTCCCAGCTCTATGAACCTTTGGCTTGCAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: VFWSSSPNSFNL*SQLYEPLACSP Trigger: GGGACTGCAAGCCAAAGGTTCATAGAGCTGGGAGCAGAGATTAAAAGAGTTCGGCGAGGAACTCCAGAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497465.1 |
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| CDS CCA 72 bp | AATAGCCTCCTGTGTTCTGCCAACTCTCAGGATGTCTaGCATCTTCAGTCAGGTTGTGTCCCTGAACTGATG | + |
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Preference number: 6 (lower is better) Translates to: NSLLCSANSQDV*HLQSGCVPELM Trigger: CATCAGTTCAGGGACACAACCTGACTGAAGATGCCAGACATCCTGAGAGTTGGCAGAACACAGGAGGCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319359.8 ENST00000433927.1 ENST00000467869.5 ENST00000476335.1 ENST00000486851.5 ENST00000497530.5 |
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| CDS CAA 90 bp | AAGCAGATAGTTGCATTCTATTTAGTTTATAGCTGCTTTGTTCCTTaGTGTTTCACTAAGCAGAGGCTCAAAAATTCCCTTGATAACTTC | + |
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Preference number: 6 (lower is better) Translates to: KQIVAFYLVYSCFVP*CFTKQRLKNSLDNF Trigger: GAAGTTATCAAGGGAATTTTTGAGCCTCTGCTTAGTGAAACACAAAGGAACAAAGCAGCTATAAACTAAATAGAATGCAACTATCTGCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000319359.8 ENST00000467869.5 ENST00000497465.1 |
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