Pregenerated sensors for ELL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000118985Ensembl transcript IDs: ENST00000237853.9, ENST00000505584.1, ENST00000508757.1, ENST00000513343.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCCACACATTGTCAGAAAGGCAGTGGACTGGCTAACGAGTTTCTaGCAAGTTTCAGAAGCAAAGAATGCACTAATGAAAAGGGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: TPHIVRKAVDWLTSF*QVSEAKNALMKRVR Trigger: CCTTACCCTTTTCATTAGTGCATTCTTTGCTTCTGAAACTTGGCAGAAACTCGTTAGCCAGTCCACTGCCTTTCTGACAATGTGTGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR CCA 90 bp | CTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGATACTTaGGCCCTATACCTAGAGATTCTAACTCAGGTGATCCAAATGGTC | + |
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Preference number: 1 (lower is better) Translates to: LAESHLQETCENADT*ALYLEILTQVIQMV Trigger: GACCATTTGGATCACCTGAGTTAGAATCTCTAGGTATAGGGCCCAAGTATCTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR TCA 90 bp | GATTCTAACTCAGGTGATCCAAATGGTCCAAGCACCTTTTGCTTTTaGGAAACCTTGCTCATAGCAAATAGCAGCACACAGTCTTTGATT | + |
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Preference number: 1 (lower is better) Translates to: DSNSGDPNGPSTFCF*ETLLIANSSTQSLI Trigger: AATCAAAGACTGTGTGCTGCTATTTGCTATGAGCAAGGTTTCTCAAAAGCAAAAGGTGCTTGGACCATTTGGATCACCTGAGTTAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR CCA 90 bp | TTCAAGATTTACAGACCTAAAAGTTTAGAACTACATCCAAGCCAATaGTTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCT | + |
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Preference number: 1 (lower is better) Translates to: FKIYRPKSLELHPSQ*FSYFSLQKVTYKKP Trigger: AGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAACCATTGGCTTGGATGTAGTTCTAAACTTTTAGGTCTGTAAATCTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR CAA 90 bp | TCACCAACTGGAAGGCTTGTTTGTAAACAGGTTCTGAAACAAGAGTaGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SPTGRLVCKQVLKQE*AVKQLRRCLRSCKG Trigger: CCCTTTGCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAACCTGTTTACAAACAAGCCTTCCAGTTGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR-3UTR TCA 90 bp | GTTCTGAAACAAGAGTTGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCGCAGCACACAGTCTTTaGTTAAAAGGCCAAGATGTC | + |
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Preference number: 2 (lower is better) Translates to: VLKQELAVKQLRRCLRSCAAHSL*LKGQDV Trigger: GACATCTTGGCCTTTTAATCAAAGACTGTGTGCTGC...GCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGAGCACCTTTTGCTTTTaGGAAACCTTGCTCATAGCA | + |
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Preference number: 2 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQSTFCF*ETLLIA Trigger: TGCTATGAGCAAGGTTTCTCAAAAGCAAAAGGTGCT...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR-3UTR CCA 90 bp | GTATGCAATGCTGGATTTCCATTTAGCATCTCCAGCTTTCATTGTTACCCAACTCTACATCCAAGCCAATaGTTCTCATACTTTAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: VCNAGFPFSISSFHCYPTLHPSQ*FSYFSL Trigger: CAAGCTAAAGTATGAGAACCATTGGCTTGGATGTAG...AGTTGGGTAACAATGAAAGCTGGAGATGCTAAATGGAAATCCAGCATTGCATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR-3UTR GCA 90 bp | GTATGCAATGCTGGATTTCCATTTAGCATCTCCAGCTTTCATTGTTACCCAACTTCCTTAGGAGGTCCATaGTACATAGAACCAAAATTT | + |
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Preference number: 2 (lower is better) Translates to: VCNAGFPFSISSFHCYPTSLGGP*YIEPKF Trigger: AAATTTTGGTTCTATGTAGCATGGACCTCCTAAGGA...AGTTGGGTAACAATGAAAGCTGGAGATGCTAAATGGAAATCCAGCATTGCATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR CAA 90 bp | AAAAGTTTAGAACTACATCCAAGCCAATGGTTCTCATACTTTAGCTaGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGATACTT | + |
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Preference number: 2 (lower is better) Translates to: KSLELHPSQWFSYFS*QKVTYKKPVKMQIL Trigger: AAGTATCTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAACCATTGGCTTGGATGTAGTTCTAAACTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR TCA 72 bp | TCAGGTGATCCAAATGGTCCAAGCACCTTTTGCTTTTaGGAAACCTTGCTCATAGCAAATAGCAGCACACAG | + |
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Preference number: 3 (lower is better) Translates to: SGDPNGPSTFCF*ETLLIANSSTQ Trigger: CTGTGTGCTGCTATTTGCTATGAGCAAGGTTTCTCAAAAGCAAAAGGTGCTTGGACCATTTGGATCACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR TCA 72 bp | ACTTTAAAAGTAGTAAAGGCATATACCAAGCATACGTaGCTCCACACATTGTCAGAAAGGCAGTGGACTGGC | + |
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Preference number: 3 (lower is better) Translates to: TLKVVKAYTKHT*LHTLSERQWTG Trigger: GCCAGTCCACTGCCTTTCTGACAATGTGTGGAGTCACGTATGCTTGGTATATGCCTTTACTACTTTTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR CCA 72 bp | AGTCACCTACAAGAAACCTGTGAAAATGCAGATACTTaGGCCCTATACCTAGAGATTCTAACTCAGGTGATC | + |
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Preference number: 3 (lower is better) Translates to: SHLQETCENADT*ALYLEILTQVI Trigger: GATCACCTGAGTTAGAATCTCTAGGTATAGGGCCCAAGTATCTGCATTTTCACAGGTTTCTTGTAGGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR TCA 72 bp | ACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTaGAAATGCAGATACTTGGGCCCTATACCTAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: TLACRKSPTRNL*KCRYLGPIPRD Trigger: ATCTCTAGGTATAGGGCCCAAGTATCTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR GCA 72 bp | ATTGTCAGAAAGGCAGTGGACTGGCTAACGAGTTTCTaGCAAGTTTCAGAAGCAAAGAATGCACTAATGAAA | + |
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Preference number: 3 (lower is better) Translates to: IVRKAVDWLTSF*QVSEAKNALMK Trigger: TTTCATTAGTGCATTCTTTGCTTCTGAAACTTGGCAGAAACTCGTTAGCCAGTCCACTGCCTTTCTGACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR-3UTR CAA 90 bp | GTATGCAATGCTGGATTTCCATTTAGCATCTCCAGCTTTCATTGTTACCCAACTAAGCACCTTTTGCTTTaGAGAAACCTTGCTCATAGC | + |
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Preference number: 3 (lower is better) Translates to: VCNAGFPFSISSFHCYPTKHLLL*RNLAHS Trigger: GCTATGAGCAAGGTTTCTCAAAAGCAAAAGGTGCTT...AGTTGGGTAACAATGAAAGCTGGAGATGCTAAATGGAAATCCAGCATTGCATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR-3UTR CAA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGTGGTCCAAGCACCTTTaGCTTTTGAGAAACCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQWSKHL*LLRNLA Trigger: AGCAAGGTTTCTCAAAAGCAAAAGGTGCTTGGACCA...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR CCA 72 bp | ATAGGCTCATGCCTCATCTTCAAAAGGGATGAAACTTaGATAGTAGCAGATTCAGAGATTTATAATTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: IGSCLIFKRDET*IVADSEIYNFQ Trigger: TTGAAAATTATAAATCTCTGAATCTGCTACTATCCAAGTTTCATCCCTTTTGAAGATGAGGCATGAGCCTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR GCA 90 bp | GTATGCAATGCTGGATTTCCATTTAGCATCTCCAGCTTTCATTGTTACCCAACTTTAAACTCCCCGGGGTaGCGCCGCCGCCGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VCNAGFPFSISSFHCYPTLNSPG*RRRRRS Trigger: GGAGCGGCGGCGGCGGCGGCACCCCGGGGAGTTTAA...AGTTGGGTAACAATGAAAGCTGGAGATGCTAAATGGAAATCCAGCATTGCATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CCA 90 bp | GTTCTGAAACAAGAGTTGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCATGGCCTCTGAGAGATaGTGCTGCTGCTATGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: VLKQELAVKQLRRCLRSCMASER*CCCYVS Trigger: AGACACATAGCAGCAGCACCATCTCTCAGAGGCCAT...GCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR TCA 90 bp | GTTCTGAAACAAGAGTTGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCTCCAAAAGCCGTTTCTaGGGAGAAGATACAGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: VLKQELAVKQLRRCLRSCSKSRF*GEDTAS Trigger: AGACGCTGTATCTTCTCCTCAGAAACGGCTTTTGGA...GCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR TCA 90 bp | GTTCTGAAACAAGAGTTGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCCATTTTTGGGAATTTTaGCAAGCCCGTGGAGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VLKQELAVKQLRRCLRSCHFWEF*QARGVL Trigger: AAGGACTCCACGGGCTTGTCAAAATTCCCAAAAATG...GCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR TCA 90 bp | GTTCTGAAACAAGAGTTGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCTCCAAGCAGAGTGTCTaGATTGATGGACCACTTTTG | + |
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Preference number: 4 (lower is better) Translates to: VLKQELAVKQLRRCLRSCSKQSV*IDGPLL Trigger: CAAAAGTGGTCCATCAATTCAGACACTCTGCTTGGA...GCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR TCA 90 bp | GTTCTGAAACAAGAGTTGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCGAGCTCTGTAACAACTaGAAAGCCCCTGTGACATTT | + |
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Preference number: 4 (lower is better) Translates to: VLKQELAVKQLRRCLRSCELCNN*KAPVTF Trigger: AAATGTCACAGGGGCTTTTCAGTTGTTACAGAGCTC...GCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CCA 90 bp | GTTCTGAAACAAGAGTTGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCATTTTGACAAGCCCGTaGAGTCCTTGGAACTGGATT | + |
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Preference number: 4 (lower is better) Translates to: VLKQELAVKQLRRCLRSCILTSP*SPWNWI Trigger: AATCCAGTTCCAAGGACTCCACGGGCTTGTCAAAAT...GCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR GCA 90 bp | GTTCTGAAACAAGAGTTGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCAGACAGACACACTTTTaGAAGGATCTGTCCAACACA | + |
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Preference number: 4 (lower is better) Translates to: VLKQELAVKQLRRCLRSCRQTHF*KDLSNT Trigger: TGTGTTGGACAGATCCTTGCAAAAGTGTGTCTGTCT...GCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR CAA 72 bp | GGAAGGCTTGTTTGTAAACAGGTTCTGAAACAAGAGTaGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCA | + |
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Preference number: 4 (lower is better) Translates to: GRLVCKQVLKQE*AVKQLRRCLRS Trigger: TGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAACCTGTTTACAAACAAGCCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR GCA 90 bp | GTATGCAATGCTGGATTTCCATTTAGCATCTCCAGCTTTCATTGTTACCCAACTGCCTCTGAGAGATGGTaGTGCTGCTATGTGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: VCNAGFPFSISSFHCYPTASERW*CCYVSF Trigger: GAAAGACACATAGCAGCAGCACCATCTCTCAGAGGC...AGTTGGGTAACAATGAAAGCTGGAGATGCTAAATGGAAATCCAGCATTGCATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CCA 90 bp | CTATTTCAAATATTTAGTTTCCTAAAGCAGCAGCGAGGCTGGTCTGCAAGAGTAAAGCAGCAGCGAGGCTaGTCTGCAAGAGTACTTACT | + |
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Preference number: 4 (lower is better) Translates to: LFQIFSFLKQQRGWSARVKQQRG*SARVLT Trigger: AGTAAGTACTCTTGCAGACCAGCCTCGCTGCTGCTT...TACTCTTGCAGACCAGCCTCGCTGCTGCTTTAGGAAACTAAATATTTGAAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508757.1 |
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| CDS-3UTR TCA 90 bp | GAAACAGAATTCCTTAGGAGGTCCATGCTACATAGAACCAAAATTTCTGCGGTATGCAAAGGGGAAAAGTaGTTTGCACCTGCTGACATG | + |
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Preference number: 4 (lower is better) Translates to: ETEFLRRSMLHRTKISAVCKGEK*FAPADM Trigger: CATGTCAGCAGGTGCAAATCACTTTTCCCCTTTGCA...TACCGCAGAAATTTTGGTTCTATGTAGCATGGACCTCCTAAGGAATTCTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR GCA 90 bp | CTATTTCAAATATTTAGTTTCCTAAAGCAGCAGCGAGGCTGGTCTGCAAGAGTAGCAGCGAGGCTGGTCTaGAAGAGTACTTACTCTAAA | + |
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Preference number: 4 (lower is better) Translates to: LFQIFSFLKQQRGWSARVAARLV*KSTYSK Trigger: TTTAGAGTAAGTACTCTTGCAGACCAGCCTCGCTGC...TACTCTTGCAGACCAGCCTCGCTGCTGCTTTAGGAAACTAAATATTTGAAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508757.1 |
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| CDS-3UTR TCA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGAGTCCTAACACGGTTTaGGTGGAACAGCTGAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQSPNTV*VEQLRN Trigger: GTTTCTCAGCTGTTCCACTCAAACCGTGTTAGGACT...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR GCA 90 bp | GAAACAGAATTCCTTAGGAGGTCCATGCTACATAGAACCAAAATTTCTGCGGTAGAGAGATGGTGCTGCTaGTATGTGTCTTTCGAATTG | + |
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Preference number: 4 (lower is better) Translates to: ETEFLRRSMLHRTKISAVERWCC*YVSFEL Trigger: CAATTCGAAAGACACATAGCAGCAGCACCATCTCTC...TACCGCAGAAATTTTGGTTCTATGTAGCATGGACCTCCTAAGGAATTCTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR GCA 90 bp | GTATGCAATGCTGGATTTCCATTTAGCATCTCCAGCTTTCATTGTTACCCAACTTCTGAGAGATGGTGCTaGTGCTATGTGTCTTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: VCNAGFPFSISSFHCYPTSERWC*CYVSFE Trigger: TTCGAAAGACACATAGCAGCAGCACCATCTCTCAGA...AGTTGGGTAACAATGAAAGCTGGAGATGCTAAATGGAAATCCAGCATTGCATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CCA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGAGAAAGGCAGTGGACTaGCTAACGAGTTTCTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQRKAVD*LTSFCQ Trigger: TTGGCAGAAACTCGTTAGCCAGTCCACTGCCTTTCT...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR TCA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGGCAGCACACAGTCTTTaGTTAAAAGGCCAAGATGTC | + |
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Preference number: 4 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQAAHSL*LKGQDV Trigger: GACATCTTGGCCTTTTAATCAAAGACTGTGTGCTGC...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR TCA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGGCTTTTACTGGTATGTaGTCAGGTCTAAGGGTATGC | + |
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Preference number: 4 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQAFTGM*SGLRVC Trigger: GCATACCCTTAGACCTGATCACATACCAGTAAAAGC...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CCA 90 bp | GAAACAGAATTCCTTAGGAGGTCCATGCTACATAGAACCAAAATTTCTGCGGTAGACTCTGCTTGCTGTTaGTCAAATTCACCTATTAGC | + |
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Preference number: 4 (lower is better) Translates to: ETEFLRRSMLHRTKISAVDSACC*SNSPIS Trigger: GCTAATAGGTGAATTTGACCAACAGCAAGCAGAGTC...TACCGCAGAAATTTTGGTTCTATGTAGCATGGACCTCCTAAGGAATTCTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR TCA 90 bp | GAAACAGAATTCCTTAGGAGGTCCATGCTACATAGAACCAAAATTTCTGCGGTACATCCAACCTGGAGTTaGTTTAAGGATGTTGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: ETEFLRRSMLHRTKISAVHPTWS*FKDVGK Trigger: TTTACCAACATCCTTAAATCAACTCCAGGTTGGATG...TACCGCAGAAATTTTGGTTCTATGTAGCATGGACCTCCTAAGGAATTCTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR TCA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGTATACCAAGCATACGTaGCTCCACACATTGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQYTKHT*LHTLSE Trigger: TTCTGACAATGTGTGGAGTCACGTATGCTTGGTATA...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR TCA 90 bp | CTATTTCAAATATTTAGTTTCCTAAAGCAGCAGCGAGGCTGGTCTGCAAGAGTAACAAATCCATTTACCTaGTACTCTTTTGAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LFQIFSFLKQQRGWSARVTNPFT*YSFEPG Trigger: TCCAGGCTCAAAAGAGTATCAGGTAAATGGATTTGT...TACTCTTGCAGACCAGCCTCGCTGCTGCTTTAGGAAACTAAATATTTGAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508757.1 |
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| CDS-3UTR GCA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGTGGCTAACGAGTTTCTaGCAAGTTTCAGAAGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQWLTSF*QVSEAK Trigger: CTTTGCTTCTGAAACTTGGCAGAAACTCGTTAGCCA...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| 3UTR CAA 72 bp | GAACTACATCCAAGCCAATGGTTCTCATACTTTAGCTaGCAGAAAGTCACCTACAAGAAACCTGTGAAAATG | + |
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Preference number: 4 (lower is better) Translates to: ELHPSQWFSYFS*QKVTYKKPVKM Trigger: CATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAACCATTGGCTTGGATGTAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR TCA 90 bp | GAAACAGAATTCCTTAGGAGGTCCATGCTACATAGAACCAAAATTTCTGCGGTACAATGCATGGAGCAATaGTATAAACTGACCATAACA | + |
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Preference number: 4 (lower is better) Translates to: ETEFLRRSMLHRTKISAVQCMEQ*YKLTIT Trigger: TGTTATGGTCAGTTTATATCATTGCTCCATGCATTG...TACCGCAGAAATTTTGGTTCTATGTAGCATGGACCTCCTAAGGAATTCTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR TCA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGCAAAATAGTTTGAAATaGGCCTCACAGCCTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQQNSLK*ASQPCS Trigger: TGAACAAGGCTGTGAGGCTCATTTCAAACTATTTTG...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR GCA 90 bp | GAAACAGAATTCCTTAGGAGGTCCATGCTACATAGAACCAAAATTTCTGCGGTATCCTTAGGAGGTCCATaGTACATAGAACCAAAATTT | + |
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Preference number: 4 (lower is better) Translates to: ETEFLRRSMLHRTKISAVSLGGP*YIEPKF Trigger: AAATTTTGGTTCTATGTAGCATGGACCTCCTAAGGA...TACCGCAGAAATTTTGGTTCTATGTAGCATGGACCTCCTAAGGAATTCTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR GCA 90 bp | GTATGCAATGCTGGATTTCCATTTAGCATCTCCAGCTTTCATTGTTACCCAACTTCTCATACTTTAGCTTaGAGAAAGTCACCTACAAGA | + |
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Preference number: 4 (lower is better) Translates to: VCNAGFPFSISSFHCYPTSHTLA*RKSPTR Trigger: TCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGA...AGTTGGGTAACAATGAAAGCTGGAGATGCTAAATGGAAATCCAGCATTGCATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR GCA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGTCAGGTCTAAGGGTATaGAATGCTGGATTTCCATTT | + |
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Preference number: 4 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQSGLRV*NAGFPF Trigger: AAATGGAAATCCAGCATTGCATACCCTTAGACCTGA...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CCA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGCTACATCCAAGCCAATaGTTCTCATACTTTAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQLHPSQ*FSYFSL Trigger: CAAGCTAAAGTATGAGAACCATTGGCTTGGATGTAG...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CCA 90 bp | GTATGCAATGCTGGATTTCCATTTAGCATCTCCAGCTTTCATTGTTACCCAACTAAAAGGGATGAAACTTaGATAGTAGCAGATTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VCNAGFPFSISSFHCYPTKRDET*IVADSE Trigger: CTCTGAATCTGCTACTATCCAAGTTTCATCCCTTTT...AGTTGGGTAACAATGAAAGCTGGAGATGCTAAATGGAAATCCAGCATTGCATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR GCA 90 bp | GTATGCAATGCTGGATTTCCATTTAGCATCTCCAGCTTTCATTGTTACCCAACTCAACATCTTCCAATATaGAAGCAGGCATTTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: VCNAGFPFSISSFHCYPTQHLPI*KQAFVL Trigger: TAAAACAAATGCCTGCTTGCATATTGGAAGATGTTG...AGTTGGGTAACAATGAAAGCTGGAGATGCTAAATGGAAATCCAGCATTGCATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CAA 90 bp | GTTCTGAAACAAGAGTTGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCTGCGGCCGCGGCTGCTaGGGCTTCTGCAGCCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: VLKQELAVKQLRRCLRSCCGRGC*GFCSRR Trigger: GCGGCGGCTGCAGAAGCCCAAGCAGCCGCGGCCGCA...GCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS CCA 90 bp | GGAAGCCAAGACCTAAATTCTAGGCTAAGCTCAGCCATAACCAGATaGCTTTGGGCAGGCAAGCTGTCCAGCTTCTCCGGGTCTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: GSQDLNSRLSSAITR*LWAGKLSSFSGSHF Trigger: GAAATGAGACCCGGAGAAGCTGGACAGCTTGCCTGCCCAAAGCCATCTGGTTATGGCTGAGCTTAGCCTAGAATTTAGGTCTTGGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505584.1 |
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| CDS CCA 90 bp | CAAGACCTAAATTCTAGGCTAAGCTCAGCCATAACCAGATGGCTTTaGGCAGGCAAGCTGTCCAGCTTCTCCGGGTCTCATTTCCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: QDLNSRLSSAITRWL*AGKLSSFSGSHFLH Trigger: GTGAAGGAAATGAGACCCGGAGAAGCTGGACAGCTTGCCTGCCCAAAGCCATCTGGTTATGGCTGAGCTTAGCCTAGAATTTAGGTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505584.1 |
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| CDS-3UTR CAA 90 bp | GAAACAGAATTCCTTAGGAGGTCCATGCTACATAGAACCAAAATTTCTGCGGTAAGATGGGCAGATAGGTaGAAGGCAGCGGTGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: ETEFLRRSMLHRTKISAVRWADR*KAAVEG Trigger: CCCCTCCACCGCTGCCTTCAACCTATCTGCCCATCT...TACCGCAGAAATTTTGGTTCTATGTAGCATGGACCTCCTAAGGAATTCTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CAA 90 bp | GTTCTGAAACAAGAGTTGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCGTTCTGAAACAAGAGTaGGCAGTGAAACAACTGAGG | + |
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Preference number: 5 (lower is better) Translates to: VLKQELAVKQLRRCLRSCVLKQE*AVKQLR Trigger: CCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC...GCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CAA 90 bp | GTTCTGAAACAAGAGTTGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCAGCAGAGTGTCTGAATaGATGGACCACTTTTGTCTA | + |
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Preference number: 5 (lower is better) Translates to: VLKQELAVKQLRRCLRSCSRVSE*MDHFCL Trigger: TAGACAAAAGTGGTCCATCAATTCAGACACTCTGCT...GCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CAA 90 bp | GTTCTGAAACAAGAGTTGGCAGTGAAACAACTGAGGAGGTGCCTCAGATCATGCACTCATTCTCTAATCTaGCTATTTTTCACACCATCC | + |
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Preference number: 5 (lower is better) Translates to: VLKQELAVKQLRRCLRSCTHSLI*LFFTPS Trigger: GGATGGTGTGAAAAATAGCAAGATTAGAGAATGAGT...GCATGATCTGAGGCACCTCCTCAGTTGTTTCACTGCCAACTCTTGTTTCAGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS GCA 90 bp | TTAAAAATGGAAAGCAAGGTAGACATTAAGTACTCTGACAAGCAGTaGTGTGTAGTGGAGAAAGTTCTGGGCTGGAAGCCAAGACCTAAA | + |
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Preference number: 5 (lower is better) Translates to: LKMESKVDIKYSDKQ*CVVEKVLGWKPRPK Trigger: TTTAGGTCTTGGCTTCCAGCCCAGAACTTTCTCCACTACACAGCACTGCTTGTCAGAGTACTTAATGTCTACCTTGCTTTCCATTTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505584.1 |
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| CDS-3UTR CAA 90 bp | GAAACAGAATTCCTTAGGAGGTCCATGCTACATAGAACCAAAATTTCTGCGGTATCATTTTTGGGAATTTaGACAAGCCCGTGGAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: ETEFLRRSMLHRTKISAVSFLGI*TSPWSP Trigger: AGGACTCCACGGGCTTGTCAAAATTCCCAAAAATGA...TACCGCAGAAATTTTGGTTCTATGTAGCATGGACCTCCTAAGGAATTCTGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CAA 90 bp | GAAACAGAATTCCTTAGGAGGTCCATGCTACATAGAACCAAAATTTCTGCGGTATGGTCCAAGCACCTTTaGCTTTTGAGAAACCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: ETEFLRRSMLHRTKISAVWSKHL*LLRNLA Trigger: AGCAAGGTTTCTCAAAAGCAAAAGGTGCTTGGACCA...TACCGCAGAAATTTTGGTTCTATGTAGCATGGACCTCCTAAGGAATTCTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CAA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGAAGCACCTTTTGCTTTaGAGAAACCTTGCTCATAGC | + |
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Preference number: 5 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQKHLLL*RNLAHS Trigger: GCTATGAGCAAGGTTTCTCAAAAGCAAAAGGTGCTT...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS-3UTR CAA 90 bp | TTCTCATACTTTAGCTTGCAGAAAGTCACCTACAAGAAACCTGTGAAAATGCAGTGTGACATTTTACCTTaGAGAGTCCTAACACGGTTT | + |
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Preference number: 5 (lower is better) Translates to: FSYFSLQKVTYKKPVKMQCDILP*RVLTRF Trigger: AAACCGTGTTAGGACTCTCAAAGGTAAAATGTCACA...CTGCATTTTCACAGGTTTCTTGTAGGTGACTTTCTGCAAGCTAAAGTATGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237853.9 |
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| CDS GCA 72 bp | TGCCGCCGCCGCCGCCGCTCCGGCTCTAGCCTCCACTaGGGCCGCGGCTGCTTGGGCTTCTGCAGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: CRRRRRSGSSLH*GRGCLGFCSRR Trigger: GCGGCGGCTGCAGAAGCCCAAGCAGCCGCGGCCGCAGTGGAGGCTAGAGCCGGAGCGGCGGCGGCGGCGGCA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000237853.9 ENST00000513343.1 |
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| CDS CCA 72 bp | GACCTAAATTCTAGGCTAAGCTCAGCCATAACCAGATaGCTTTGGGCAGGCAAGCTGTCCAGCTTCTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: DLNSRLSSAITR*LWAGKLSSFSG Trigger: CCCGGAGAAGCTGGACAGCTTGCCTGCCCAAAGCCATCTGGTTATGGCTGAGCTTAGCCTAGAATTTAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505584.1 |
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| CDS GCA 72 bp | GAAAGCAAGGTAGACATTAAGTACTCTGACAAGCAGTaGTGTGTAGTGGAGAAAGTTCTGGGCTGGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: ESKVDIKYSDKQ*CVVEKVLGWKP Trigger: TGGCTTCCAGCCCAGAACTTTCTCCACTACACAGCACTGCTTGTCAGAGTACTTAATGTCTACCTTGCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505584.1 |
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| CDS TCA 72 bp | CGGGTCTCATTTCCTTCACTTATACATCAGAGGACCTaGTTAGAGGCCCCTAATATCTATGTCAGGTCTATA | + |
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Preference number: 6 (lower is better) Translates to: RVSFPSLIHQRT*LEAPNIYVRSI Trigger: TATAGACCTGACATAGATATTAGGGGCCTCTAATCAGGTCCTCTGATGTATAAGTGAAGGAAATGAGACCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505584.1 |
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| CDS CCA 72 bp | TTTCAAATATTTAGTTTCCTAAAGCAGCAGCGAGGCTaGTCTGCAAGAGTACTTACTCTAAAGGCCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: FQIFSFLKQQRG*SARVLTLKATV Trigger: CACAGTGGCCTTTAGAGTAAGTACTCTTGCAGACCAGCCTCGCTGCTGCTTTAGGAAACTAAATATTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508757.1 |
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