RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELL (Homo sapiens)

Ensembl gene IDs: ENSG00000105656

Ensembl transcript IDs: ENST00000262809.9, ENST00000594635.6, ENST00000596124.3, ENST00000596915.1, ENST00000608165.1

Found 526 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCACAGTCCGTCAGCAGGGGCAGGCCGAGGCGCACAGTGGGGGCTaGGGCAGCCGCCTCTCCGTGCTCACAGTCTCGGCCGCTGTGGCC +
Preference number: 1 (lower is better)
Translates to: GTVRQQGQAEAHSGG*GSRLSVLTVSAAVA
Trigger: GGCCACAGCGGCCGAGACTGTGAGCACGGAGAGGCGGCTGCCCCAGCCCCCACTGTGCGCCTCGGCCTGCCCCTGCTGACGGACTGTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR TCA 90 bp CCTCTCCGTGCTCACAGTCTCGGCCGCTGTGGCCCAGGTCATTGCTaGCATCGGCCAGGGGGTCGTGGGCCCTCGGGGGCTCCAGCCGCG +
Preference number: 1 (lower is better)
Translates to: PLRAHSLGRCGPGHC*HRPGGRGPSGAPAA
Trigger: CGCGGCTGGAGCCCCCGAGGGCCCACGACCCCCTGGCCGATGTCAGCAATGACCTGGGCCACAGCGGCCGAGACTGTGAGCACGGAGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 90 bp TGGACTTCTTCTTGGGCTTGCTGCGCGAGGGGCTGCCGTGTGGCCTaGTGGGCTGGGCACAGTCCGTCAGCAGGGGCAGGCCGAGGCGCA +
Preference number: 1 (lower is better)
Translates to: WTSSWACCARGCRVA*WAGHSPSAGAGRGA
Trigger: TGCGCCTCGGCCTGCCCCTGCTGACGGACTGTGCCCAGCCCAGCAGGCCACACGGCAGCCCCTCGCGCAGCAAGCCCAAGAAGAAGTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 90 bp TACTCCTCGGAGCCCTGGGAGAGCTGCCGGAGCTGGGCGTCGAGCTaGGTGAACCGCCGCGTGATGCGCTCAATGCGGGCGTGCAGGTCG +
Preference number: 1 (lower is better)
Translates to: YSSEPWESCRSWASS*VNRRVMRSMRACRS
Trigger: CGACCTGCACGCCCGCATTGAGCGCATCACGCGGCGGTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGAGTA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 90 bp GGCCGTAGTGCCAGGAGGTGCAGCACTCGGTCACGGAAGGGCCTCTaGGACACCCCGCTGCCCCCACTCACGGCACTGGCACCACTCTTC +
Preference number: 1 (lower is better)
Translates to: GRSARRCSTRSRKGL*DTPLPPLTALAPLF
Trigger: GAAGAGTGGTGCCAGTGCCGTGAGTGGGGGCAGCGGGGTGTCCCAGAGGCCCTTCCGTGACCGAGTGCTGCACCTCCTGGCACTACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 90 bp GGAGGAGGCAGTGGGCTTCCTGGGGAGCCCATCATAAGCAGGGACTaGTCAGGAAGCGCAGGGAGGGCCGAGGTGGGCTTGCAGCCACCC +
Preference number: 1 (lower is better)
Translates to: GGGSGLPGEPIISRD*SGSAGRAEVGLQPP
Trigger: GGGTGGCTGCAAGCCCACCTCGGCCCTCCCTGCGCTTCCTGAGCAGTCCCTGCTTATGATGGGCTCCCCAGGAAGCCCACTGCCTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CCA 90 bp CTTCTTGGACTTCTTCTTGGGCTTGCTGCGCGAGGGGCTGCCGTGTaGCCTGCTGGGCTGGGCACAGTCCGTCAGCAGGGGCAGGCCGAG +
Preference number: 1 (lower is better)
Translates to: LLGLLLGLAARGAAV*PAGLGTVRQQGQAE
Trigger: CTCGGCCTGCCCCTGCTGACGGACTGTGCCCAGCCCAGCAGGCCACACGGCAGCCCCTCGCGCAGCAAGCCCAAGAAGAAGTCCAAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR TCA 90 bp GGCTTGCAGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTaGAAGCCGGCGGTGCTGGCTCAGATGAGCATCTTCCTCGGGTTT +
Preference number: 1 (lower is better)
Translates to: GLQPPARARRLQGLP*KPAVLAQMSIFLGF
Trigger: AAACCCGAGGAAGATGCTCATCTGAGCCAGCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCTGCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR GCA 90 bp CCTGCGTCAGGCCGTCCTTCTGCAGTCGCAGCAGCAGCTCAGCCTTaGGGTAGGGCCGTAGTGCCAGGAGGTGCAGCACTCGGTCACGGA +
Preference number: 1 (lower is better)
Translates to: PASGRPSAVAAAAQP*GRAVVPGGAALGHG
Trigger: TCCGTGACCGAGTGCTGCACCTCCTGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGCTGCGACTGCAGAAGGACGGCCTGACGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 90 bp TTGGCCACCTGCTGGAGGAGGCCATCCAGCGCGTCCTTGTCCGCCTaGGTCAGGCCGTCCTTCTGCAGTCGCAGCAGCAGCTCAGCCTTG +
Preference number: 1 (lower is better)
Translates to: LATCWRRPSSASLSA*VRPSFCSRSSSSAL
Trigger: CAAGGCTGAGCTGCTGCTGCGACTGCAGAAGGACGGCCTGACGCAGGCGGACAAGGACGCGCTGGATGGCCTCCTCCAGCAGGTGGCCAA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 90 bp GTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCGGTGTCTaGAGGGCTGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTG +
Preference number: 1 (lower is better)
Translates to: VPGWDLLKSSHLTGV*RAACGRHSKVQLTL
Trigger: CAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCAGCCCTGCAGACACCGGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR GCA 90 bp ACTGGCACCACTCTTCCTGATGGCACTCGCCAAGTTGATGGGGGTTaGCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCTGG +
Preference number: 1 (lower is better)
Translates to: TGTTLPDGTRQVDGG*PLPGGHRVCCTWGW
Trigger: CCAGCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAACTTGGCGAGTGCCATCAGGAAGAGTGGTGCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 90 bp GGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCTaGTTTCCGAAACTGAACCTTCTTGCCCAGGTAGCGGCCTCCAGC +
Preference number: 1 (lower is better)
Translates to: GCPLPGGHRVCCTWG*FPKLNLLAQVAASS
Trigger: GCTGGAGGCCGCTACCTGGGCAAGAAGGTTCAGTTTCGGAAACCAGCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 90 bp GATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTaGGGCTGGTTTCCGAAACTGAACCTTCTTGCCCAGGTAGCGGCC +
Preference number: 1 (lower is better)
Translates to: DGGCPLPGGHRVCCT*GWFPKLNLLAQVAA
Trigger: GGCCGCTACCTGGGCAAGAAGGTTCAGTTTCGGAAACCAGCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 90 bp GACCTCCTGAAATCATCCCACCTCACCGGTGTCTGCAGGGCTGCCTaGGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: DLLKSSHLTGVCRAA*GRHSKVQLTLEASW
Trigger: CCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCAGCCCTGCAGACACCGGTGAGGTGGGATGATTTCAGGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR GCA 90 bp CTGGGACCTCCTGAAATCATCCCACCTCACCGGTGTCTGCAGGGCTaGCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTC +
Preference number: 1 (lower is better)
Translates to: LGPPEIIPPHRCLQG*LRATQQGPADSGGL
Trigger: GAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCAGCCCTGCAGACACCGGTGAGGTGGGATGATTTCAGGAGGTCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR GCA 90 bp GTCGCGGCCGATGTTGGAGAGGTAGAAGGAGAACGTCCGCGCCTCTaGGGGGCAGTCAGGCTGGGGGATGGAGATGTGCTGGAAGCCCAT +
Preference number: 1 (lower is better)
Translates to: VAADVGEVEGERPRL*GAVRLGDGDVLEAH
Trigger: ATGGGCTTCCAGCACATCTCCATCCCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTACCTCTCCAACATCGGCCGCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 90 bp CTTTGTGCTTCTTGGACTTCTTCTTGGGCTTGCTGCGCGAGGGGCTaGCGTGTGGCCTGCTGGGCTGGGCACAGTCCGTCAGCAGGGGCA +
Preference number: 1 (lower is better)
Translates to: LCASWTSSWACCARG*RVACWAGHSPSAGA
Trigger: TGCCCCTGCTGACGGACTGTGCCCAGCCCAGCAGGCCACACGGCAGCCCCTCGCGCAGCAAGCCCAAGAAGAAGTCCAAGAAGCACAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 90 bp AGCTGGGCCCGGGGCTTGTCCTCAGCCGCCCTCTCCTTGTCTTTGTaGTTCTTGGACTTCTTCTTGGGCTTGCTGCGCGAGGGGCTGCCG +
Preference number: 1 (lower is better)
Translates to: SWARGLSSAALSLSL*FLDFFLGLLREGLP
Trigger: CGGCAGCCCCTCGCGCAGCAAGCCCAAGAAGAAGTCCAAGAAGCACAAAGACAAGGAGAGGGCGGCTGAGGACAAGCCCCGGGCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 90 bp GCCTGCAGCTGCCGCTGGTCGTACTCGGCGATGAGCCTCTTGATGTaGGCCAGCTTGCTGTGCAGGTACTCGCAGCGGTGCTTCTCCTGG +
Preference number: 1 (lower is better)
Translates to: ACSCRWSYSAMSLLM*ASLLCRYSQRCFSW
Trigger: CCAGGAGAAGCACCGCTGCGAGTACCTGCACAGCAAGCTGGCCCACATCAAGAGGCTCATCGCCGAGTACGACCAGCGGCAGCTGCAGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 90 bp GCGTCGAGCTGGGTGAACCGCCGCGTGATGCGCTCAATGCGGGCGTaGAGGTCGCGGTACTCGCTGTACTCGGCATTGAAGTCGTTCTTG +
Preference number: 1 (lower is better)
Translates to: ASSWVNRRVMRSMRA*RSRYSLYSALKSFL
Trigger: CAAGAACGACTTCAATGCCGAGTACAGCGAGTACCGCGACCTGCACGCCCGCATTGAGCGCATCACGCGGCGGTTCACCCAGCTCGACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 90 bp GGGTCCCAAAGGAGAGAGACTCTCGGGCAGGGGTGGGATACACTGTaGGCCCTCCACAGTCAGCTCTTTGGAAGCTGTCAGGAGGCACCC +
Preference number: 1 (lower is better)
Translates to: GSQRRETLGQGWDTL*ALHSQLFGSCQEAP
Trigger: GGGTGCCTCCTGACAGCTTCCAAAGAGCTGACTGTGGAGGGCCCACAGTGTATCCCACCCCTGCCCGAGAGTCTCTCTCCTTTGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CCA 90 bp CTGGGAACCCGGGGGTCCCAAAGGAGAGAGACTCTCGGGCAGGGGTaGGATACACTGTGGGCCCTCCACAGTCAGCTCTTTGGAAGCTGT +
Preference number: 1 (lower is better)
Translates to: LGTRGSQRRETLGQG*DTLWALHSQLFGSC
Trigger: ACAGCTTCCAAAGAGCTGACTGTGGAGGGCCCACAGTGTATCCCACCCCTGCCCGAGAGTCTCTCTCCTTTGGGACCCCCGGGTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR TCA 90 bp TGCTCTGCCGCGCCTTCTGGTAGGAGTCGTCGGTGGCACACACCGTaGTCTTGTCCTGTATGCTGCCCAGGCAGTCCAGGTGAACTTCCC +
Preference number: 1 (lower is better)
Translates to: CSAAPSGRSRRWHTP*SCPVCCPGSPGELP
Trigger: GGGAAGTTCACCTGGACTGCCTGGGCAGCATACAGGACAAGATCACGGTGTGTGCCACCGACGACTCCTACCAGAAGGCGCGGCAGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 90 bp CAAGTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTaGACCTGGGGCTGGTTTCCGAAACTGAACCTTCTTGCCCAGGTA +
Preference number: 1 (lower is better)
Translates to: QVDGGCPLPGGHRVC*TWGWFPKLNLLAQV
Trigger: TACCTGGGCAAGAAGGTTCAGTTTCGGAAACCAGCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR TCA 90 bp GCTCAATGCGGGCGTGCAGGTCGCGGTACTCGCTGTACTCGGCATTaGAGTCGTTCTTGTAGCTCTGGCGCTGCTCCGAAGAGGAGATGG +
Preference number: 1 (lower is better)
Translates to: AQCGRAGRGTRCTRH*SRSCSSGAAPKRRW
Trigger: CCATCTCCTCTTCGGAGCAGCGCCAGAGCTACAAGAACGACTTCAATGCCGAGTACAGCGAGTACCGCGACCTGCACGCCCGCATTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 90 bp CCAGCTGGAGTTCTCAAAATAGCCACCTGGGCCACCCTGTTTGCTTaGTGGAGCAGAGACCCTGCCCAAGGAGGAGAGGCTGGGGAAAGG +
Preference number: 1 (lower is better)
Translates to: PAGVLKIATWATLFA*WSRDPAQGGEAGER
Trigger: CCTTTCCCCAGCCTCTCCTCCTTGGGCAGGGTCTCTGCTCCAGCAAGCAAACAGGGTGGCCCAGGTGGCTATTTTGAGAACTCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CCA 90 bp AGCAGCTGTCTGGGGGCACCAGCTGGAGTTCTCAAAATAGCCACCTaGGCCACCCTGTTTGCTTGCTGGAGCAGAGACCCTGCCCAAGGA +
Preference number: 1 (lower is better)
Translates to: SSCLGAPAGVLKIAT*ATLFACWSRDPAQG
Trigger: TCCTTGGGCAGGGTCTCTGCTCCAGCAAGCAAACAGGGTGGCCCAGGTGGCTATTTTGAGAACTCCAGCTGGTGCCCCCAGACAGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CCA 90 bp ACTTCAGCAAGTAGTCAGGCGTCTCCGACGTGGACGTGGGAACACTaGAAACGCTGCAGGTTCCGTTTAAACCTGGGGTGTCTGCTGGGG +
Preference number: 1 (lower is better)
Translates to: TSASSQASPTWTWEH*KRCRFRLNLGCLLG
Trigger: CCCCAGCAGACACCCCAGGTTTAAACGGAACCTGCAGCGTTTCCAGTGTTCCCACGTCCACGTCGGAGACGCCTGACTACTTGCTGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 90 bp TGGCTGCGTACTTCAGCAAGTAGTCAGGCGTCTCCGACGTGGACGTaGGAACACTGGAAACGCTGCAGGTTCCGTTTAAACCTGGGGTGT +
Preference number: 1 (lower is better)
Translates to: WLRTSASSQASPTWT*EHWKRCRFRLNLGC
Trigger: ACACCCCAGGTTTAAACGGAACCTGCAGCGTTTCCAGTGTTCCCACGTCCACGTCGGAGACGCCTGACTACTTGCTGAAGTACGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 90 bp CAACAACAGCTATTGAAACATGAAGGATCAGTTTCCTCGGAGCTCTaGGAACCCGGGGGTCCCAAAGGAGAGAGACTCTCGGGCAGGGGT +
Preference number: 1 (lower is better)
Translates to: QQQLLKHEGSVSSEL*EPGGPKGERLSGRG
Trigger: ACCCCTGCCCGAGAGTCTCTCTCCTTTGGGACCCCCGGGTTCCCAGAGCTCCGAGGAAACTGATCCTTCATGTTTCAATAGCTGTTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CCA 90 bp AGGAGATGGCTGCGTACTTCAGCAAGTAGTCAGGCGTCTCCGACGTaGACGTGGGAACACTGGAAACGCTGCAGGTTCCGTTTAAACCTG +
Preference number: 1 (lower is better)
Translates to: RRWLRTSASSQASPT*TWEHWKRCRFRLNL
Trigger: CAGGTTTAAACGGAACCTGCAGCGTTTCCAGTGTTCCCACGTCCACGTCGGAGACGCCTGACTACTTGCTGAAGTACGCAGCCATCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR TCA 90 bp GCAGCAGCAACAAATGGGAAACCGAGGACATCGCAAAGAAAAGTCTaGCGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAG +
Preference number: 1 (lower is better)
Translates to: AAATNGKPRTSQRKV*RRCGRVSTWSTETQ
Trigger: CTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCATTTGTTGCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CAA 90 bp GCCGCCTCTCCGTGCTCACAGTCTCGGCCGCTGTGGCCCAGGTCATaGCTGACATCGGCCAGGGGGTCGTGGGCCCTCGGGGGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: AASPCSQSRPLWPRS*LTSARGSWALGGSS
Trigger: GCTGGAGCCCCCGAGGGCCCACGACCCCCTGGCCGATGTCAGCAATGACCTGGGCCACAGCGGCCGAGACTGTGAGCACGGAGAGGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCGACGTCTGCAGGGGCTaGCCTGAAAGCCGGCGGTGC +
Preference number: 2 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCDVCRG*PESRRC
Trigger: GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTC...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp TCCTCGGAGCCCTGGGAGAGCTGCCGGAGCTGGGCGTCGAGCTGGGTGAACCGCGAACGTCCGCGCCTCTaGGGGGCAGTCAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SSEPWESCRSWASSWVNRERPRL*GAVRLG
Trigger: CCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTC...GCGGTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR TCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTTCCCTGGGGCCTCCCTaGCCCCATGGCGCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPSLGPP*PHGAQP
Trigger: GGGCTGGGCGCCATGGGGTCAGGGAGGCCCCAGGGA...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCCCAGGGCCAGACGTCTaGAGGGGCTGCCCTGAAAGC +
Preference number: 2 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCPGPDV*RGCPES
Trigger: GCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGG...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CCA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGGTGTCCGTGCTGGCTaGTGGGCCCGGGGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWGVRAG*WARGGQ
Trigger: CTGCCCACCCCGGGCCCACCAGCCAGCACGGACACC...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR TCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTCTGCAGGGGCTGCCCTaGAAGCCGGCGGTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPLQGLP*KPAVLA
Trigger: AGCCAGCACCGCCGGCTTTCAGGGCAGCCCCTGCAG...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR TCA 90 bp CTGGGCCATGCTCTGCCGCGCCTTCTGGTAGGAGTCGTCGGTGGCACACACCGTCTGCAGGGGCTGCCCTaGAAGCCGGCGGTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: LGHALPRLLVGVVGGTHRLQGLP*KPAVLA
Trigger: AGCCAGCACCGCCGGCTTTCAGGGCAGCCCCTGCAG...ACGGTGTGTGCCACCGACGACTCCTACCAGAAGGCGCGGCAGAGCATGGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR TCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTCAGGCCTGGGGGCGCTaGAAGCCCTCTGCCCCCTTG +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPQAWGR*KPSAPL
Trigger: CAAGGGGGCAGAGGGCTTTCAGCGCCCCCAGGCCTG...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR TCA 90 bp TCCTCGGAGCCCTGGGAGAGCTGCCGGAGCTGGGCGTCGAGCTGGGTGAACCGCCGACAGCTGAGGGCCTaGAATAGCAGGGCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: SSEPWESCRSWASSWVNRRQLRA*NSRAGL
Trigger: CAGGCCTGCCCTGCTATTTCAGGCCCTCAGCTGTCG...GCGGTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR TCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCTCGCAAAGAAAAGTCTaGCGCCGCTGCGGCCGAGTC +
Preference number: 2 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCSQRKV*RRCGRV
Trigger: GACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGA...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCGTCAGGCCGTCCTTCTaGAGTCGCAGCAGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCVRPSF*SRSSSS
Trigger: TGAGCTGCTGCTGCGACTGCAGAAGGACGGCCTGAC...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGCAGCCGCCTCTCCGTaGTCACAGTCTCGGCCGCTG +
Preference number: 2 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWAAASP*SQSRPL
Trigger: CAGCGGCCGAGACTGTGAGCACGGAGAGGCGGCTGC...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTGGCTGCCGTGTGGCCTaGTGGGCTGGGCACAGTCCG +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPGCRVA*WAGHSP
Trigger: CGGACTGTGCCCAGCCCAGCAGGCCACACGGCAGCC...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGTCACGGAAGGGCCTCTaGGACACCCCGCTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWSRKGL*DTPLPP
Trigger: TGGGGGCAGCGGGGTGTCCCAGAGGCCCTTCCGTGA...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCACCTGGGGTGTCTGCTaGGGCTCCGGGGGTGGCATG +
Preference number: 2 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTTWGVC*GSGGGM
Trigger: CATGCCACCCCCGGAGCCCCAGCAGACACCCCAGGT...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCGGCTGGGGAAAGGGGTaGCTAAACGTAGAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCGWGKG*LNVEPE
Trigger: CTCTGGCTCTACGTTTAGGCACCCCTTTCCCCAGCC...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp GTCGCAGCAGCAGCTCAGCCTTGCGGTAGGGCCGTAGTGCCAGGAGGTGCAGCACCTCCGCCTGGGCCATaGTCTGCCGCGCCTTCTGGT +
Preference number: 2 (lower is better)
Translates to: VAAAAQPCGRAVVPGGAAPPPGP*SAAPSG
Trigger: ACCAGAAGGCGCGGCAGAGCATGGCCCAGGCGGAGG...TGCTGCACCTCCTGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGCTGCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCAGGCAGTGGGCTTCCTaGGGAGCCCATCATAAGCAG +
Preference number: 2 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCRQWAS*GAHHKQ
Trigger: CTGCTTATGATGGGCTCCCCAGGAAGCCCACTGCCT...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCCAGTCGAAGCTGCCCTaGGGGTTGTCGCGGCCGATG +
Preference number: 2 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTQSKLP*GLSRPM
Trigger: CATCGGCCGCGACAACCCCCAGGGCAGCTTCGACTG...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCCAGGCGTCTCCGACGTaGACGTGGGAACACTGGAAA +
Preference number: 2 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCQASPT*TWEHWK
Trigger: TTTCCAGTGTTCCCACGTCCACGTCGGAGACGCCTG...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CAA 90 bp GCACTCATGTTGGCCACCTGCTGGAGGAGGCCATCCAGCGCGTCCTaGTCCGCCTGCGTCAGGCCGTCCTTCTGCAGTCGCAGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: ALMLATCWRRPSSAS*SACVRPSFCSRSSS
Trigger: GCTGCTGCTGCGACTGCAGAAGGACGGCCTGACGCAGGCGGACAAGGACGCGCTGGATGGCCTCCTCCAGCAGGTGGCCAACATGAGTGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR TCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTGTGGCCCCCGACAGCTaGGGGCCTGAAATAGCAGGG +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPVAPDS*GPEIAG
Trigger: CCCTGCTATTTCAGGCCCTCAGCTGTCGGGGGCCAC...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR TCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTCGCCCAGCTTCCCGTTaGCGGCAGGCTGAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPRPASR*RQAELS
Trigger: AGAGAGCTCAGCCTGCCGTCAACGGGAAGCTGGGCG...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR TCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTGGTGAGTGCTGGAGCTaGGGGTGTCCGTGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPGECWS*GCPCWL
Trigger: CAGCCAGCACGGACACCCTCAGCTCCAGCACTCACC...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCCCCAGGACCCACAAGTaGACAGAGGGACGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTPRTHK*TEGRRE
Trigger: CTCCCTCCGTCCCTCTGTCCACTTGTGGGTCCTGGG...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR TCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCACAGCAAGGTCCAGCTaGCTCTGGAGGCCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTTARSS*LWRPPG
Trigger: TCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGT...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCTCTCTCACCGCCTTTTaGTCCCCCGACCCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTSLTAF*SPDPPR
Trigger: TCTGGGAGGGTCGGGGGAGCAAAAGGCGGTGAGAGA...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGGGCCGAGGTGGGCTTaGAGCCACCCGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: PHALRTQLHLSTTSVILQGPRWA*SHPPGP
Trigger: TGGCCCTGGCGGGTGGCTGCAAGCCCACCTCGGCCC...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCGGGCCGAGGTGGGCTTaGAGCCACCCGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGGPRWA*SHPPGP
Trigger: TGGCCCTGGCGGGTGGCTGCAAGCCCACCTCGGCCC...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCTCTTGTCCTGTATGCTaGCCAGGCAGTCCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCSCPVC*PGSPGE
Trigger: TTCACCTGGACTGCCTGGGCAGCATACAGGACAAGA...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTGGTCTCCAAGGAGGCTaGCAGTGCTCTGTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPGLQGG*QCSVAG
Trigger: GCCAGCCACAGAGCACTGGCAGCCTCCTTGGAGACC...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAGTCTCCTCCTCCGCCTaGGCCATGCTCTGCCGCGCC +
Preference number: 2 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTVSSSA*AMLCRA
Trigger: GGCGCGGCAGAGCATGGCCCAGGCGGAGGAGGAGAC...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CAA 90 bp CCACTCACGGCACTGGCACCACTCTTCCTGATGGCACTCGCCAAGTaGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCA +
Preference number: 2 (lower is better)
Translates to: PLTALAPLFLMALAK*MGVARFREGTASVA
Trigger: TGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAACTTGGCGAGTGCCATCAGGAAGAGTGGTGCCAGTGCCGTGAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CAA 90 bp GCCCGGGGCTTGTCCTCAGCCGCCCTCTCCTTGTCTTTGTGCTTCTaGGACTTCTTCTTGGGCTTGCTGCGCGAGGGGCTGCCGTGTGGC +
Preference number: 2 (lower is better)
Translates to: ARGLSSAALSLSLCF*DFFLGLLREGLPCG
Trigger: GCCACACGGCAGCCCCTCGCGCAGCAAGCCCAAGAAGAAGTCCAAGAAGCACAAAGACAAGGAGAGGGCGGCTGAGGACAAGCCCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CAA 90 bp GGCCAAGCCTGCAGCTGCCGCTGGTCGTACTCGGCGATGAGCCTCTaGATGTGGGCCAGCTTGCTGTGCAGGTACTCGCAGCGGTGCTTC +
Preference number: 2 (lower is better)
Translates to: GQACSCRWSYSAMSL*MWASLLCRYSQRCF
Trigger: GAAGCACCGCTGCGAGTACCTGCACAGCAAGCTGGCCCACATCAAGAGGCTCATCGCCGAGTACGACCAGCGGCAGCTGCAGGCTTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR TCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCAGCCGCGGGGGCAGGTaGGTGCTGGAGCTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGSRGGR*VLELRV
Trigger: CACCCTCAGCTCCAGCACTCACCTGCCCCCGCGGCT...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp TCCTCGGAGCCCTGGGAGAGCTGCCGGAGCTGGGCGTCGAGCTGGGTGAACCGCTTGTACATGCAGTCCTaGAGTGTACACGTGCCGTCC +
Preference number: 2 (lower is better)
Translates to: SSEPWESCRSWASSWVNRLYMQS*SVHVPS
Trigger: GGACGGCACGTGTACACTGCAGGACTGCATGTACAA...GCGGTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCTCTCCGACGTGGACGTaGGAACACTGGAAACGCTGC +
Preference number: 2 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTSPTWT*EHWKRC
Trigger: GCAGCGTTTCCAGTGTTCCCACGTCCACGTCGGAGA...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CAA 90 bp GGAAGCTGGGCCCGGGGCTTGTCCTCAGCCGCCCTCTCCTTGTCTTaGTGCTTCTTGGACTTCTTCTTGGGCTTGCTGCGCGAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GSWARGLSSAALSLS*CFLDFFLGLLREGL
Trigger: CAGCCCCTCGCGCAGCAAGCCCAAGAAGAAGTCCAAGAAGCACAAAGACAAGGAGAGGGCGGCTGAGGACAAGCCCCGGGCCCAGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR TCA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGCGGTGCTGGCTCAGATaGGCATCTTCCTCGGGTTTA +
Preference number: 2 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWRCWLR*ASSSGL
Trigger: TAAACCCGAGGAAGATGCTCATCTGAGCCAGCACCG...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR TCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAGGCGAGACAGGAGGCTaGACCCCGGAGGCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAGETGG*TPEAAA
Trigger: GGCTGCAGCCTCCGGGGTTCAGCCTCCTGTCTCGCC...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR TCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAGGCCTGGGGGCGCTaGAAGCCCTCTGCCCCCTTG +
Preference number: 2 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESQAWGR*KPSAPL
Trigger: CAAGGGGGCAGAGGGCTTTCAGCGCCCCCAGGCCTG...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR TCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTCGGTGGCACACACCGTaGTCTTGTCCTGTATGCTGC +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPRWHTP*SCPVCC
Trigger: GCAGCATACAGGACAAGATCACGGTGTGTGCCACCG...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGACGTCTGCAGGGGCTaGCCTGAAAGCCGGCGGTGC +
Preference number: 2 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGDVCRG*PESRRC
Trigger: GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCGAAACTGAACCTTCTTaGCCAGGTAGCGGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTETEPS*PGSGLQ
Trigger: CTGGAGGCCGCTACCTGGGCAAGAAGGTTCAGTTTC...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCTCTGGGACACCCCGCTaGCCCCACTCACGGCACTGG +
Preference number: 2 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGSGTPR*PHSRHW
Trigger: CCAGTGCCGTGAGTGGGGGCAGCGGGGTGTCCCAGA...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp TCCTCGGAGCCCTGGGAGAGCTGCCGGAGCTGGGCGTCGAGCTGGGTGAACCGCCGAAGAGGAGATGGCTaGGTACTTCAGCAAGTAGTC +
Preference number: 2 (lower is better)
Translates to: SSEPWESCRSWASSWVNRRRGDG*VLQQVV
Trigger: GACTACTTGCTGAAGTACGCAGCCATCTCCTCTTCG...GCGGTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAGCAGCGGCTAGACCCTaGGTGTCCGAGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTAAARP*VSEERE
Trigger: CTCCCTCTCCTCGGACACCCAGGGTCTAGCCGCTGC...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR TCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCCGGTGCTGGCTCAGATaGGCATCTTCCTCGGGTTTA +
Preference number: 2 (lower is better)
Translates to: RPAEATCPFPTPSERSCTRCWLR*ASSSGL
Trigger: TAAACCCGAGGAAGATGCTCATCTGAGCCAGCACCG...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR TCA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGCGACAGCTGAGGGCCTaGAATAGCAGGGCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: CGRVSTWSTETQWPPTAERQLRA*NSRAGL
Trigger: CAGGCCTGCCCTGCTATTTCAGGCCCTCAGCTGTCG...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR TCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGTCCCTGGGGCCTCCCTaGCCCCATGGCGCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRSLGPP*PHGAQP
Trigger: GGGCTGGGCGCCATGGGGTCAGGGAGGCCCCAGGGA...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGCTGAACCCCGGAGGCTaGAGCCAGGGAGGAGGCAGT +
Preference number: 2 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGLNPGG*SQGGGS
Trigger: ACTGCCTCCTCCCTGGCTGCAGCCTCCGGGGTTCAG...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCGGTGTCTGCAGGGCTaGCTGCGGGCGACACAGCAA +
Preference number: 2 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGRCLQG*LRATQQ
Trigger: TTGCTGTGTCGCCCGCAGGCAGCCCTGCAGACACCG...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCGCGTCCTTGTCCGCCTaGGTCAGGCCGTCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGASLSA*VRPSFC
Trigger: GCAGAAGGACGGCCTGACGCAGGCGGACAAGGACGC...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGCTCAAAATAGCCACCTaGGCCACCCTGTTTGCTTGC +
Preference number: 2 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWLKIAT*ATLFAC
Trigger: GCAAGCAAACAGGGTGGCCCAGGTGGCTATTTTGAG...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCTCTGGGGGCACCAGCTaGAGTTCTCAAAATAGCCAC +
Preference number: 2 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTSGGTS*SSQNSH
Trigger: GTGGCTATTTTGAGAACTCCAGCTGGTGCCCCCAGA...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCACTCTGGAGGCCTCCTaGAGCCTGCTCGGCCCTTCC +
Preference number: 2 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGTLEAS*SLLGPS
Trigger: GGAAGGGCCGAGCAGGCTCCAGGAGGCCTCCAGAGT...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTCTGGAGACATACTGCTaGATGCAGTCGAAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPLETYC*MQSKLP
Trigger: GGGCAGCTTCGACTGCATCCAGCAGTATGTCTCCAG...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAGCACAGTCTGGAAGCTaGGCCCGGGGCTTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTAQSGS*ARGLSS
Trigger: TGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGC...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CAA 90 bp CAGTCTGGAAGCTGGGCCCGGGGCTTGTCCTCAGCCGCCCTCTCCTaGTCTTTGTGCTTCTTGGACTTCTTCTTGGGCTTGCTGCGCGAG +
Preference number: 2 (lower is better)
Translates to: QSGSWARGLSSAALS*SLCFLDFFLGLLRE
Trigger: CTCGCGCAGCAAGCCCAAGAAGAAGTCCAAGAAGCACAAAGACAAGGAGAGGGCGGCTGAGGACAAGCCCCGGGCCCAGCTTCCAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR TCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCACAGCTATTGAAACATaGAGGATCAGTTTCCTCGGA +
Preference number: 2 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCTAIET*RISFLG
Trigger: TCCGAGGAAACTGATCCTTCATGTTTCAATAGCTGT...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR TCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCCGCTGTACTCGGCATTaGAGTCGTTCTTGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTRCTRH*SRSCSS
Trigger: AGAGCTACAAGAACGACTTCAATGCCGAGTACAGCG...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACATCTCTCACCGCCTTTTaGTCCCCCGACCCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTSLTAF*SPDPPR
Trigger: TCTGGGAGGGTCGGGGGAGCAAAAGGCGGTGAGAGA...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACACTGGGCCACCCTGTTTaGTTGCTGGAGCAGAGACCC +
Preference number: 2 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTLGHPV*LLEQRP
Trigger: GGGTCTCTGCTCCAGCAAGCAAACAGGGTGGCCCAG...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp AGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCTGGGCCACCCTGTTTaGTTGCTGGAGCAGAGACCC +
Preference number: 2 (lower is better)
Translates to: SLTPLRPSLNLEHRNTVALGHPV*LLEQRP
Trigger: GGGTCTCTGCTCCAGCAAGCAAACAGGGTGGCCCAG...GGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGCAGCAGCTCAGCCTTaGGGTAGGGCCGTAGTGCCA +
Preference number: 2 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGAAAQP*GRAVVP
Trigger: TGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp AGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCTCATGTTGGCCACCTaGTGGAGGAGGCCATCCAGC +
Preference number: 2 (lower is better)
Translates to: SLTPLRPSLNLEHRNTVALMLAT*WRRPSS
Trigger: GCTGGATGGCCTCCTCCAGCAGGTGGCCAACATGAG...GGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTGGCCGAGTCTCAACTTaGAGCACAGAAACACAGTGG +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPGRVST*STETQW
Trigger: CCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCC...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CCA 90 bp ATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGCCCGGGGCTTGTCCTCAGCCGCTGTTGCACCTGGGGCTaGTTTCCGAAACTGAACCTT +
Preference number: 2 (lower is better)
Translates to: MGGRCTVWKLGPGLVLSRCCTWG*FPKLNL
Trigger: AAGGTTCAGTTTCGGAAACCAGCCCCAGGTGCAACA...GCGGCTGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGCACCTGCCACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTCTGAACCCCGGAGGCTaGAGCCAGGGAGGAGGCAGT +
Preference number: 2 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLLNPGG*SQGGGS
Trigger: ACTGCCTCCTCCCTGGCTGCAGCCTCCGGGGTTCAG...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAGCGCTGAAAGCCCTCTaGCCCCTTGGCTCTGAGCAG +
Preference number: 2 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAALKAL*PLGSEQ
Trigger: CTGCTCAGAGCCAAGGGGGCAGAGGGCTTTCAGCGC...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGAGCAATTGGGGTGTCTaGAGAGCCTGCACCCCCAGA +
Preference number: 2 (lower is better)
Translates to: CGRVSTWSTETQWPPTAESNWGV*RACTPR
Trigger: TCTGGGGGTGCAGGCTCTGCAGACACCCCAATTGCT...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCGGGCACCGCGTCTGTTaGACCTGGGGCTGGTTTCCG +
Preference number: 2 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVGHRVC*TWGWFP
Trigger: CGGAAACCAGCCCCAGGTGCAACAGACGCGGTGCCC...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCAGCACAGAAACACAGTaGCCCCCGACAGCTGAGGGC +
Preference number: 2 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGSTETQ*PPTAEG
Trigger: GCCCTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCT...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTTCATTCAGCCCTAAATaGGAACACACGCCTCAGACC +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPSFSPK*EHTPQT
Trigger: GGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGA...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAAGTCAGGCTGGGGGATaGAGATGTGCTGGAAGCCCA +
Preference number: 2 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTSQAGG*RCAGSP
Trigger: TGGGCTTCCAGCACATCTCCATCCCCCAGCCTGACT...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCGCGGGGCAGTCAGGCTaGGGGATGGAGATGTGCTGG +
Preference number: 2 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVAGQSG*GMEMCW
Trigger: CCAGCACATCTCCATCCCCCAGCCTGACTGCCCCGC...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGCAGTCTCGGCCGCTGTaGCCCAGGTCATTGCTGACA +
Preference number: 2 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGQSRPL*PRSLLT
Trigger: TGTCAGCAATGACCTGGGCCACAGCGGCCGAGACTG...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTGCCACCCTGTTTGCTTaGTGGAGCAGAGACCCTGCC +
Preference number: 2 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESATLFA*WSRDPA
Trigger: GGCAGGGTCTCTGCTCCAGCAAGCAAACAGGGTGGC...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTCAAGTTGATGGGGGTTaGCCGCTTCCGGGAGGGCAC +
Preference number: 2 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLQVDGG*PLPGGH
Trigger: GTGCCCTCCCGGAAGCGGGCAACCCCCATCAACTTG...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGGCCTAGGAGTCTTCTaGCGAGACAGGAGGCTGAAC +
Preference number: 2 (lower is better)
Translates to: PHALRTQLHLSTTSVILQGLGVF*RDRRLN
Trigger: GTTCAGCCTCCTGTCTCGCCAGAAGACTCCTAGGCC...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCAACTGACAGCCCCTTaGACTGGTTCCCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGQLTAP*TGSQGR
Trigger: TCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTG...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp CGTTCTTGTAGCTCTGGCGCTGCTCCGAAGAGGAGATGGCTGCGTACTTCAGCAGGCTGGGGAAAGGGGTaGCTAAACGTAGAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: RSCSSGAAPKRRWLRTSAGWGKG*LNVEPE
Trigger: CTCTGGCTCTACGTTTAGGCACCCCTTTCCCCAGCC...TGCTGAAGTACGCAGCCATCTCCTCTTCGGAGCAGCGCCAGAGCTACAAGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACACATTTCTGTTCTCCCTaGCTGACTGCTGATGGCAGC +
Preference number: 2 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTHFCSP*LTADGS
Trigger: GCTGCCATCAGCAGTCAGGCAGGGAGAACAGAAATG...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGAGGATGCAGTCGAAGCTaGCCTGGGGGTTGTCGCGGC +
Preference number: 2 (lower is better)
Translates to: IFLQNLPSSSLILLGALGGCSRS*PGGCRG
Trigger: GCCGCGACAACCCCCAGGGCAGCTTCGACTGCATCC...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGAGCAGCGGCTAGACCCTaGGTGTCCGAGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: IFLQNLPSSSLILLGALGAAARP*VSEERE
Trigger: CTCCCTCTCCTCGGACACCCAGGGTCTAGCCGCTGC...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGAGCTGGGCGTCGAGCTaGGTGAACCGCCGCGTGATG +
Preference number: 2 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRSWASS*VNRRVM
Trigger: CATCACGCGGCGGTTCACCCAGCTCGACGCCCAGCT...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR TCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGCGGGCTGGGACCTCCTaGAATCATCCCACCTCACCG +
Preference number: 2 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRRAGTS*NHPTSP
Trigger: CGGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCG...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGATCATAAGCAGGGACTaGTCAGGAAGCGCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQIISRD*SGSAGR
Trigger: CCTCCCTGCGCTTCCTGAGCAGTCCCTGCTTATGAT...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAATCATAAGCAGGGACTaGTCAGGAAGCGCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAIISRD*SGSAGR
Trigger: CCTCCCTGCGCTTCCTGAGCAGTCCCTGCTTATGAT...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGCAGCCCCTCCCTGAGTaGAAACCTTGGCGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRQPLPE*KPWRWL
Trigger: GAGCCACCGCCAAGGTTTGCACTCAGGGAGGGGCTG...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAGCACATCCTTGTACATaGAGTCCTGCAGTGTACACG +
Preference number: 2 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTAHPCT*SPAVYT
Trigger: CGTGTACACTGCAGGACTGCATGTACAAGGATGTGC...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCGGCCTAGGAGTCTTCTaGCGAGACAGGAGGCTGAAC +
Preference number: 2 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVGLGVF*RDRRLN
Trigger: GTTCAGCCTCCTGTCTCGCCAGAAGACTCCTAGGCC...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTCACCTTTCCAAGTCATaGCTTCATTCAGCCCTAAAT +
Preference number: 2 (lower is better)
Translates to: CLRATQQGPADSGGLLEPHLSKS*LHSALN
Trigger: ATTTAGGGCTGAATGAAGCCATGACTTGGAAAGGTG...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTCGCGTCTGTTGCACCTaGGGCTGGTTTCCGAAACTG +
Preference number: 2 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLRVCCT*GWFPKL
Trigger: CAGTTTCGGAAACCAGCCCCAGGTGCAACAGACGCG...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGACGGGGGTGGCATGGGTaGCAGGTGCACAGTCTGGAA +
Preference number: 2 (lower is better)
Translates to: IFLQNLPSSSLILLGALGRGWHG*QVHSLE
Trigger: TTCCAGACTGTGCACCTGCCACCCATGCCACCCCCG...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCAGACATACTGCTGGATaGAGTCGAAGCTGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVRHTAG*SRSCPG
Trigger: CCCAGGGCAGCTTCGACTGCATCCAGCAGTATGTCT...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGCAAGGAGGCTGCCAGTaGTCTGTGGCTGGCACAGCT +
Preference number: 2 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRQGGCQ*SVAGTA
Trigger: AGCTGTGCCAGCCACAGAGCACTGGCAGCCTCCTTG...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTTCTGGGGGCACCAGCTaGAGTTCTCAAAATAGCCAC +
Preference number: 2 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESSGGTS*SSQNSH
Trigger: GTGGCTATTTTGAGAACTCCAGCTGGTGCCCCCAGA...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGAACTTCCCCATGACTaGAGACATACTGCTGGATGC +
Preference number: 2 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGELPHD*RHTAGC
Trigger: GCATCCAGCAGTATGTCTCCAGTCATGGGGAAGTTC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR TCA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGACAGCTATTGAAACATaGAGGATCAGTTTCCTCGGA +
Preference number: 2 (lower is better)
Translates to: CGRVSTWSTETQWPPTAETAIET*RISFLG
Trigger: TCCGAGGAAACTGATCCTTCATGTTTCAATAGCTGT...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGAGCAGCAGCAACAAATaGGAAACCGAGGACATCGCA +
Preference number: 2 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRSSSNK*ETEDIA
Trigger: TGCGATGTCCTCGGTTTCCCATTTGTTGCTGCTGCT...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR GCA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGAGAACACTGGAAACGCTaGAGGTTCCGTTTAAACCTG +
Preference number: 2 (lower is better)
Translates to: IFLQNLPSSSLILLGALGEHWKR*RFRLNL
Trigger: CAGGTTTAAACGGAACCTGCAGCGTTTCCAGTGTTC...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR GCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGTATTCCTGCAAAATCTaGCCTCGAGTAGTCTCATAC +
Preference number: 2 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRYSCKI*PRVVSY
Trigger: GTATGAGACTACTCGAGGGCAGATTTTGCAGGAATA...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR TCA 72 bp TCGTGGGCCCTCGGGGGCTCCAGCCGCGGGGGCAGGTaGGTGCTGGAGCTGAGGGTGTCCGTGCTGGCTGGT +
Preference number: 3 (lower is better)
Translates to: SWALGGSSRGGR*VLELRVSVLAG
Trigger: ACCAGCCAGCACGGACACCCTCAGCTCCAGCACTCACCTGCCCCCGCGGCTGGAGCCCCCGAGGGCCCACGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 72 bp AGGTGGGCTTGCAGCCACCCGCCAGGGCCAGACGTCTaGAGGGGCTGCCCTGAAAGCCGGCGGTGCTGGCTC +
Preference number: 3 (lower is better)
Translates to: RWACSHPPGPDV*RGCPESRRCWL
Trigger: GAGCCAGCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCTGCAAGCCCACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR GCA 72 bp TCTTGGGCTTGCTGCGCGAGGGGCTGCCGTGTGGCCTaGTGGGCTGGGCACAGTCCGTCAGCAGGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: SWACCARGCRVA*WAGHSPSAGAG
Trigger: GCCTGCCCCTGCTGACGGACTGTGCCCAGCCCAGCAGGCCACACGGCAGCCCCTCGCGCAGCAAGCCCAAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 72 bp GAGCCCTGGGAGAGCTGCCGGAGCTGGGCGTCGAGCTaGGTGAACCGCCGCGTGATGCGCTCAATGCGGGCG +
Preference number: 3 (lower is better)
Translates to: EPWESCRSWASS*VNRRVMRSMRA
Trigger: CGCCCGCATTGAGCGCATCACGCGGCGGTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR TCA 72 bp GCTCACAGTCTCGGCCGCTGTGGCCCAGGTCATTGCTaGCATCGGCCAGGGGGTCGTGGGCCCTCGGGGGCT +
Preference number: 3 (lower is better)
Translates to: AHSLGRCGPGHC*HRPGGRGPSGA
Trigger: AGCCCCCGAGGGCCCACGACCCCCTGGCCGATGTCAGCAATGACCTGGGCCACAGCGGCCGAGACTGTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 72 bp AGGCGCACAGTGGGGGCTGGGGCAGCCGCCTCTCCGTaGTCACAGTCTCGGCCGCTGTGGCCCAGGTCATTG +
Preference number: 3 (lower is better)
Translates to: RRTVGAGAAASP*SQSRPLWPRSL
Trigger: CAATGACCTGGGCCACAGCGGCCGAGACTGTGAGCACGGAGAGGCGGCTGCCCCAGCCCCCACTGTGCGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 72 bp GCCAGGAGGTGCAGCACTCGGTCACGGAAGGGCCTCTaGGACACCCCGCTGCCCCCACTCACGGCACTGGCA +
Preference number: 3 (lower is better)
Translates to: ARRCSTRSRKGL*DTPLPPLTALA
Trigger: TGCCAGTGCCGTGAGTGGGGGCAGCGGGGTGTCCCAGAGGCCCTTCCGTGACCGAGTGCTGCACCTCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CAA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCGGCCACCCTGTTTGCTaGCTGGAGCAGAGACCCTGC +
Preference number: 3 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCGHPVC*LEQRPC
Trigger: GCAGGGTCTCTGCTCCAGCAAGCAAACAGGGTGGCC...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CAA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCAAGCCCTCTGCCCCCTaGGCTCTGAGCAGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCKPSAP*ALSSCL
Trigger: CAGACAGCTGCTCAGAGCCAAGGGGGCAGAGGGCTT...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CAA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTCCATCCAGCGCGTCCTaGTCCGCCTGCGTCAGGCCG +
Preference number: 3 (lower is better)
Translates to: CLRATQQGPADSGGLLEPPSSAS*SACVRP
Trigger: CGGCCTGACGCAGGCGGACAAGGACGCGCTGGATGG...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 72 bp AGGCAGGCGCGCCACCCCAAGGGCCTAGGAGTCTTCTaGCGAGACAGGAGGCTGAACCCCGGAGGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: RQARHPKGLGVF*RDRRLNPGGCS
Trigger: GCTGCAGCCTCCGGGGTTCAGCCTCCTGTCTCGCCAGAAGACTCCTAGGCCCTTGGGGTGGCGCGCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CCA 72 bp GGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTaGGCCCGGGGCTTGTCCTCAGCCGCCCTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: GVAWVAGAQSGS*ARGLSSAALSL
Trigger: CAAGGAGAGGGCGGCTGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 72 bp TGCTGGAGGAGGCCATCCAGCGCGTCCTTGTCCGCCTaGGTCAGGCCGTCCTTCTGCAGTCGCAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: CWRRPSSASLSA*VRPSFCSRSSS
Trigger: GCTGCTGCTGCGACTGCAGAAGGACGGCCTGACGCAGGCGGACAAGGACGCGCTGGATGGCCTCCTCCAGCA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR TCA 72 bp GACCCCATGGCGCCCAGCCCTCCATCAGCCCCTCCCTaGGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGA +
Preference number: 3 (lower is better)
Translates to: DPMAPSPPSAPP*VQTLAVALLRR
Trigger: TCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGAGGGGCTGATGGAGGGCTGGGCGCCATGGGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CAA 90 bp ATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGCCCGGGGCTTGTCCTCAGCCGCGCACACACCGTGATCTaGTCCTGTATGCTGCCCAGG +
Preference number: 3 (lower is better)
Translates to: MGGRCTVWKLGPGLVLSRAHTVI*SCMLPR
Trigger: CCTGGGCAGCATACAGGACAAGATCACGGTGTGTGC...GCGGCTGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGCACCTGCCACCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CAA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCATGGCACTCGCCAAGTaGATGGGGGTTGCCCGCTTC +
Preference number: 3 (lower is better)
Translates to: RPAEATCPFPTPSERSCTMALAK*MGVARF
Trigger: GAAGCGGGCAACCCCCATCAACTTGGCGAGTGCCAT...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 72 bp TGGGACCTCCTGAAATCATCCCACCTCACCGGTGTCTaGAGGGCTGCCTGCGGGCGACACAGCAAGGTCCAG +
Preference number: 3 (lower is better)
Translates to: WDLLKSSHLTGV*RAACGRHSKVQ
Trigger: CTGGACCTTGCTGTGTCGCCCGCAGGCAGCCCTGCAGACACCGGTGAGGTGGGATGATTTCAGGAGGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR GCA 72 bp GGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTaGACCTGGGGCTGGTTTCCGAAACTGAACCTTCTT +
Preference number: 3 (lower is better)
Translates to: GGCPLPGGHRVC*TWGWFPKLNLL
Trigger: AAGAAGGTTCAGTTTCGGAAACCAGCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 72 bp ACTCTTCCTGATGGCACTCGCCAAGTTGATGGGGGTTaGCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACC +
Preference number: 3 (lower is better)
Translates to: TLPDGTRQVDGG*PLPGGHRVCCT
Trigger: GGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAACTTGGCGAGTGCCATCAGGAAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 72 bp TGGGTGAACCGCCGCGTGATGCGCTCAATGCGGGCGTaGAGGTCGCGGTACTCGCTGTACTCGGCATTGAAG +
Preference number: 3 (lower is better)
Translates to: WVNRRVMRSMRA*RSRYSLYSALK
Trigger: CTTCAATGCCGAGTACAGCGAGTACCGCGACCTGCACGCCCGCATTGAGCGCATCACGCGGCGGTTCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 72 bp TGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTaGGGCTGGTTTCCGAAACTGAACCTTCTTGCCCAG +
Preference number: 3 (lower is better)
Translates to: CPLPGGHRVCCT*GWFPKLNLLAQ
Trigger: CTGGGCAAGAAGGTTCAGTTTCGGAAACCAGCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 72 bp TGCCGCTGGTCGTACTCGGCGATGAGCCTCTTGATGTaGGCCAGCTTGCTGTGCAGGTACTCGCAGCGGTGC +
Preference number: 3 (lower is better)
Translates to: CRWSYSAMSLLM*ASLLCRYSQRC
Trigger: GCACCGCTGCGAGTACCTGCACAGCAAGCTGGCCCACATCAAGAGGCTCATCGCCGAGTACGACCAGCGGCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CAA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTGCAACAGAGCAGCAATaGGGGTGTCTGCAGAGCCTG +
Preference number: 3 (lower is better)
Translates to: CLRATQQGPADSGGLLEPATEQQ*GCLQSL
Trigger: CAGGCTCTGCAGACACCCCAATTGCTGCTCTGTTGC...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR GCA 72 bp AAATCATCCCACCTCACCGGTGTCTGCAGGGCTGCCTaGGGGCGACACAGCAAGGTCCAGCTGACTCTGGAG +
Preference number: 3 (lower is better)
Translates to: KSSHLTGVCRAA*GRHSKVQLTLE
Trigger: CTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCAGCCCTGCAGACACCGGTGAGGTGGGATGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR GCA 72 bp CCTGAAATCATCCCACCTCACCGGTGTCTGCAGGGCTaGCTGCGGGCGACACAGCAAGGTCCAGCTGACTCT +
Preference number: 3 (lower is better)
Translates to: PEIIPPHRCLQG*LRATQQGPADS
Trigger: AGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCAGCCCTGCAGACACCGGTGAGGTGGGATGATTTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CCA 72 bp CGGGGGTCCCAAAGGAGAGAGACTCTCGGGCAGGGGTaGGATACACTGTGGGCCCTCCACAGTCAGCTCTTT +
Preference number: 3 (lower is better)
Translates to: RGSQRRETLGQG*DTLWALHSQLF
Trigger: AAAGAGCTGACTGTGGAGGGCCCACAGTGTATCCCACCCCTGCCCGAGAGTCTCTCTCCTTTGGGACCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CCA 72 bp CTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCTaGTTTCCGAAACTGAACCTTCTTGCCCAGGTAGCG +
Preference number: 3 (lower is better)
Translates to: LPGGHRVCCTWG*FPKLNLLAQVA
Trigger: CGCTACCTGGGCAAGAAGGTTCAGTTTCGGAAACCAGCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CAA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGAGCTGGGCCCGGGGCTaGTCCTCAGCCGCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRSWARG*SSAALS
Trigger: GGAGAGGGCGGCTGAGGACAAGCCCCGGGCCCAGCT...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR TCA 72 bp GCGCCTTCTGGTAGGAGTCGTCGGTGGCACACACCGTaGTCTTGTCCTGTATGCTGCCCAGGCAGTCCAGGT +
Preference number: 3 (lower is better)
Translates to: APSGRSRRWHTP*SCPVCCPGSPG
Trigger: ACCTGGACTGCCTGGGCAGCATACAGGACAAGATCACGGTGTGTGCCACCGACGACTCCTACCAGAAGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR TCA 72 bp GGGCGTGCAGGTCGCGGTACTCGCTGTACTCGGCATTaGAGTCGTTCTTGTAGCTCTGGCGCTGCTCCGAAG +
Preference number: 3 (lower is better)
Translates to: GRAGRGTRCTRH*SRSCSSGAAPK
Trigger: CTTCGGAGCAGCGCCAGAGCTACAAGAACGACTTCAATGCCGAGTACAGCGAGTACCGCGACCTGCACGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 72 bp GCGTCTCCGACGTGGACGTGGGAACACTGGAAACGCTaGAGGTTCCGTTTAAACCTGGGGTGTCTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: ASPTWTWEHWKR*RFRLNLGCLLG
Trigger: CCCCAGCAGACACCCCAGGTTTAAACGGAACCTGCAGCGTTTCCAGTGTTCCCACGTCCACGTCGGAGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CAA 90 bp TGTCCTGTATGCTGCCCAGGCAGTCCAGGTGAACTTCCCCATGACTGGAGACATCTCTCTCACCGCCTTTaGCTCCCCCGACCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: CPVCCPGSPGELPHDWRHLSHRL*LPRPSQ
Trigger: CTGGGAGGGTCGGGGGAGCAAAAGGCGGTGAGAGAG...ATGTCTCCAGTCATGGGGAAGTTCACCTGGACTGCCTGGGCAGCATACAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CAA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTAAGCTGCCCTGGGGGTaGTCGCGGCCGATGTTGGAG +
Preference number: 3 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLKLPWG*SRPMLE
Trigger: CTCCAACATCGGCCGCGACAACCCCCAGGGCAGCTT...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 72 bp CTGGGGGCACCAGCTGGAGTTCTCAAAATAGCCACCTaGGCCACCCTGTTTGCTTGCTGGAGCAGAGACCCT +
Preference number: 3 (lower is better)
Translates to: LGAPAGVLKIAT*ATLFACWSRDP
Trigger: AGGGTCTCTGCTCCAGCAAGCAAACAGGGTGGCCCAGGTGGCTATTTTGAGAACTCCAGCTGGTGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CAA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACACGGCCGAGTCTCAACTaGGAGCACAGAAACACAGTG +
Preference number: 3 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTRPSLN*EHRNTV
Trigger: CACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCG...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CAA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCTCCTTAGCACTCATGTaGGCCACCTGCTGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGSLALM*ATCWRR
Trigger: CCTCCTCCAGCAGGTGGCCAACATGAGTGCTAAGGA...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CAA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCTTCTTGGACTTCTTCTaGGGCTTGCTGCGCGAGGGG +
Preference number: 3 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGFLDFF*GLLREG
Trigger: CCCCTCGCGCAGCAAGCCCAAGAAGAAGTCCAAGAA...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CAA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGTTGTCTTTGTGCTTCTaGGACTTCTTCTTGGGCTTG +
Preference number: 3 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWLSLCF*DFFLGL
Trigger: CAAGCCCAAGAAGAAGTCCAAGAAGCACAAAGACAA...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CAA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGCTCTCTCACCGCCTTTaGCTCCCCCGACCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRLSHRL*LPRPSQ
Trigger: CTGGGAGGGTCGGGGGAGCAAAAGGCGGTGAGAGAG...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR-3UTR CAA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGGACTTCTTCTTGGGCTaGCTGCGCGAGGGGCTGCCG +
Preference number: 3 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRDFFLG*LREGLP
Trigger: CGGCAGCCCCTCGCGCAGCAAGCCCAAGAAGAAGTC...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR GCA 72 bp GTTCTCAAAATAGCCACCTGGGCCACCCTGTTTGCTTaGTGGAGCAGAGACCCTGCCCAAGGAGGAGAGGCT +
Preference number: 3 (lower is better)
Translates to: VLKIATWATLFA*WSRDPAQGGEA
Trigger: AGCCTCTCCTCCTTGGGCAGGGTCTCTGCTCCAGCAAGCAAACAGGGTGGCCCAGGTGGCTATTTTGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CCA 72 bp CTGCGTACTTCAGCAAGTAGTCAGGCGTCTCCGACGTaGACGTGGGAACACTGGAAACGCTGCAGGTTCCGT +
Preference number: 3 (lower is better)
Translates to: LRTSASSQASPT*TWEHWKRCRFR
Trigger: ACGGAACCTGCAGCGTTTCCAGTGTTCCCACGTCCACGTCGGAGACGCCTGACTACTTGCTGAAGTACGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 72 bp CGTTCTTGTAGCTCTGGCGCTGCTCCGAAGAGGAGATaGCTGCGTACTTCAGCAAGTAGTCAGGCGTCTCCG +
Preference number: 3 (lower is better)
Translates to: RSCSSGAAPKRR*LRTSASSQASP
Trigger: CGGAGACGCCTGACTACTTGCTGAAGTACGCAGCCATCTCCTCTTCGGAGCAGCGCCAGAGCTACAAGAACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR-3UTR CAA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGAAAGCCCTCTGCCCCCTaGGCTCTGAGCAGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: IFLQNLPSSSLILLGALGKPSAP*ALSSCL
Trigger: CAGACAGCTGCTCAGAGCCAAGGGGGCAGAGGGCTT...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 72 bp AGTAGTCAGGCGTCTCCGACGTGGACGTGGGAACACTaGAAACGCTGCAGGTTCCGTTTAAACCTGGGGTGT +
Preference number: 3 (lower is better)
Translates to: SSQASPTWTWEH*KRCRFRLNLGC
Trigger: ACACCCCAGGTTTAAACGGAACCTGCAGCGTTTCCAGTGTTCCCACGTCCACGTCGGAGACGCCTGACTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR TCA 72 bp ACAAATGGGAAACCGAGGACATCGCAAAGAAAAGTCTaGCGCCGCTGCGGCCGAGTCTCAACTTGGAGCACA +
Preference number: 3 (lower is better)
Translates to: TNGKPRTSQRKV*RRCGRVSTWST
Trigger: TGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCATTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR GCA 72 bp GGCCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTaGAGTGTACACGTGCCGTCCTTAGCACTCATGTTG +
Preference number: 3 (lower is better)
Translates to: GQSFCTSLYMQS*SVHVPSLALML
Trigger: CAACATGAGTGCTAAGGACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CCA 72 bp ACTTCAGCAAGTAGTCAGGCGTCTCCGACGTGGACGTaGGAACACTGGAAACGCTGCAGGTTCCGTTTAAAC +
Preference number: 3 (lower is better)
Translates to: TSASSQASPTWT*EHWKRCRFRLN
Trigger: GTTTAAACGGAACCTGCAGCGTTTCCAGTGTTCCCACGTCCACGTCGGAGACGCCTGACTACTTGCTGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCGTCTCCTCCTCCGCCTaGGCCATGCTCTGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCVSSSA*AMLCRA
Trigger: GGCGCGGCAGAGCATGGCCCAGGCGGAGGAGGAGAC...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGTCCCTGGGGCCTCCCTaGCCCCATGGCGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWSLGPP*PHGAQP
Trigger: GGGCTGGGCGCCATGGGGTCAGGGAGGCCCCAGGGA...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp GTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCGGTGTCCGTGCTGGCTaGTGGGCCCGGGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VDGGCPLPGGHRVCCTWGGVRAG*WARGGQ
Trigger: CTGCCCACCCCGGGCCCACCAGCCAGCACGGACACC...GCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp TCCTCGGAGCCCTGGGAGAGCTGCCGGAGCTGGGCGTCGAGCTGGGTGAACCGCTCACGGAAGGGCCTCTaGGACACCCCGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SSEPWESCRSWASSWVNRSRKGL*DTPLPP
Trigger: TGGGGGCAGCGGGGTGTCCCAGAGGCCCTTCCGTGA...GCGGTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCAGGCCTCACGGCCATTaGGCACGCCCAGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCRPHGH*ARPASR
Trigger: ACGGGAAGCTGGGCGTGCCCAATGGCCGTGAGGCCT...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CAA 72 bp CCGTGCTCACAGTCTCGGCCGCTGTGGCCCAGGTCATaGCTGACATCGGCCAGGGGGTCGTGGGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: PCSQSRPLWPRS*LTSARGSWALG
Trigger: CCCGAGGGCCCACGACCCCCTGGCCGATGTCAGCAATGACCTGGGCCACAGCGGCCGAGACTGTGAGCACGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCCAGGCCTGGGGGCGCTaGAAGCCCTCTGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTQAWGR*KPSAPL
Trigger: CAAGGGGGCAGAGGGCTTTCAGCGCCCCCAGGCCTG...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCCCTCCGCCTGGGCCATaGTCTGCCGCGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VDGGCPLPGGHRVCCTWGPPPGP*SAAPSG
Trigger: ACCAGAAGGCGCGGCAGAGCATGGCCCAGGCGGAGG...GCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCGAGCCCTGGGAGAGCTaGCGGAGCTGGGCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTEPWES*RSWASS
Trigger: GCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTC...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGAGCCCTGGGAGAGCTaGCGGAGCTGGGCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWEPWES*RSWASS
Trigger: GCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTC...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCGCTGCCAGTGCTCTGTaGCTGGCACAGCTTCCGGAC +
Preference number: 4 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCAASAL*LAQLPD
Trigger: GTCCGGAAGCTGTGCCAGCCACAGAGCACTGGCAGC...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTGCGCACAGTGGGGGCTaGGGCAGCCGCCTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: CLRATQQGPADSGGLLEPAHSGG*GSRLSV
Trigger: CACGGAGAGGCGGCTGCCCCAGCCCCCACTGTGCGC...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCACCTGGGGTGTCTGCTaGGGCTCCGGGGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: VDGGCPLPGGHRVCCTWGTWGVC*GSGGGM
Trigger: CATGCCACCCCCGGAGCCCCAGCAGACACCCCAGGT...GCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp TCCTCGGAGCCCTGGGAGAGCTGCCGGAGCTGGGCGTCGAGCTGGGTGAACCGCGCGGGGCAGTCAGGCTaGGGGATGGAGATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSEPWESCRSWASSWVNRAGQSG*GMEMCW
Trigger: CCAGCACATCTCCATCCCCCAGCCTGACTGCCCCGC...GCGGTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCACAGCAAGGTCCAGCTaGCTCTGGAGGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCTARSS*LWRPPG
Trigger: TCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGT...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCGGATGCAGTCGAAGCTaGCCTGGGGGTTGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: VDGGCPLPGGHRVCCTWGGCSRS*PGGCRG
Trigger: GCCGCGACAACCCCCAGGGCAGCTTCGACTGCATCC...GCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp ATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGCCCGGGGCTTGTCCTCAGCCGCTCTGGGACACCCCGCTaGCCCCACTCACGGCACTGG +
Preference number: 4 (lower is better)
Translates to: MGGRCTVWKLGPGLVLSRSGTPR*PHSRHW
Trigger: CCAGTGCCGTGAGTGGGGGCAGCGGGGTGTCCCAGA...GCGGCTGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGCACCTGCCACCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCCAAGGAGGCTGCCAGTaGTCTGTGGCTGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCQGGCQ*SVAGTA
Trigger: AGCTGTGCCAGCCACAGAGCACTGGCAGCCTCCTTG...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCCACCTCACCGGTGTCTaGAGGGCTGCCTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTHLTGV*RAACGR
Trigger: TCGCCCGCAGGCAGCCCTGCAGACACCGGTGAGGTG...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTGGGGGATGGAGATCTGCAGCCGCTTCTGTaGGGGCGAGGCCGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: VEGERPRLCGAVRLGDGDLQPLL*GRGRAP
Trigger: GGGCGCTCGGCCTCGCCCCCACAGAAGCGGCTGCAG...ATCTCCATCCCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCCTGGGGCTCCGGGGGTaGCATGGGTGGCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTLGLRG*HGWQVH
Trigger: GTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAG...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCACTCTGGAGGCCTCCTaGAGCCTGCTCGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VDGGCPLPGGHRVCCTWGTLEAS*SLLGPS
Trigger: GGAAGGGCCGAGCAGGCTCCAGGAGGCCTCCAGAGT...GCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCGGATGCAGTCGAAGCTaGCCTGGGGGTTGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTGCSRS*PGGCRG
Trigger: GCCGCGACAACCCCCAGGGCAGCTTCGACTGCATCC...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTGGCCAAGCCTGCAGCTaGCGCTGGTCGTACTCGGCG +
Preference number: 4 (lower is better)
Translates to: CLRATQQGPADSGGLLEPGQACS*RWSYSA
Trigger: CGCCGAGTACGACCAGCGGCAGCTGCAGGCTTGGCC...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCCCAGGGCCAGACGTCTaGAGGGGCTGCCCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTPGPDV*RGCPES
Trigger: GCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGG...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCCAGCCCCTCCCTGAGTaGAAACCTTGGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VDGGCPLPGGHRVCCTWGQPLPE*KPWRWL
Trigger: GAGCCACCGCCAAGGTTTGCACTCAGGGAGGGGCTG...GCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCTCAGCGCCGCCATCTTaGGACCATCTCTCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTSAPPS*DHLSPA
Trigger: CGCGGGGGAGAGATGGTCGCAAGATGGCGGCGCTGA...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp GTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCGCACAGTCTGGAAGCTaGGCCCGGGGCTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VDGGCPLPGGHRVCCTWGAQSGS*ARGLSS
Trigger: TGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGC...GCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp ATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGCCCGGGGCTTGTCCTCAGCCGCGCTCCGGGGGTGGCATaGGTGGCAGGTGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: MGGRCTVWKLGPGLVLSRAPGVA*VAGAQS
Trigger: AGACTGTGCACCTGCCACCCATGCCACCCCCGGAGC...GCGGCTGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGCACCTGCCACCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp GTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTGGGGGATGGAGATCTGGGGCTCCGGGGGTaGCATGGGTGGCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VEGERPRLCGAVRLGDGDLGLRG*HGWQVH
Trigger: GTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAG...ATCTCCATCCCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCTCTCCGACGTGGACGTaGGAACACTGGAAACGCTGC +
Preference number: 4 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCSPTWT*EHWKRC
Trigger: GCAGCGTTTCCAGTGTTCCCACGTCCACGTCGGAGA...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CAA 72 bp TTGGCCACCTGCTGGAGGAGGCCATCCAGCGCGTCCTaGTCCGCCTGCGTCAGGCCGTCCTTCTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: LATCWRRPSSAS*SACVRPSFCSR
Trigger: GCGACTGCAGAAGGACGGCCTGACGCAGGCGGACAAGGACGCGCTGGATGGCCTCCTCCAGCAGGTGGCCAA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp CTGGGCCATGCTCTGCCGCGCCTTCTGGTAGGAGTCGTCGGTGGCACACACCGTGGCCCAGGTCATTGCTaGCATCGGCCAGGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: LGHALPRLLVGVVGGTHRGPGHC*HRPGGR
Trigger: ACGACCCCCTGGCCGATGTCAGCAATGACCTGGGCC...ACGGTGTGTGCCACCGACGACTCCTACCAGAAGGCGCGGCAGAGCATGGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp GTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCACAGCAAGGTCCAGCTaGCTCTGGAGGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VDGGCPLPGGHRVCCTWGTARSS*LWRPPG
Trigger: TCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGT...GCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCGAAACTGAACCTTCTTaGCCAGGTAGCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCETEPS*PGSGLQ
Trigger: CTGGAGGCCGCTACCTGGGCAAGAAGGTTCAGTTTC...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTCGCTCAATGCGGGCGTaGAGGTCGCGGTACTCGCTG +
Preference number: 4 (lower is better)
Translates to: CLRATQQGPADSGGLLEPRSMRA*RSRYSL
Trigger: CAGCGAGTACCGCGACCTGCACGCCCGCATTGAGCG...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp CTGGGCCATGCTCTGCCGCGCCTTCTGGTAGGAGTCGTCGGTGGCACACACCGTCGCTCAATGCGGGCGTaGAGGTCGCGGTACTCGCTG +
Preference number: 4 (lower is better)
Translates to: LGHALPRLLVGVVGGTHRRSMRA*RSRYSL
Trigger: CAGCGAGTACCGCGACCTGCACGCCCGCATTGAGCG...ACGGTGTGTGCCACCGACGACTCCTACCAGAAGGCGCGGCAGAGCATGGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAGGGCCGAGGTGGGCTTaGAGCCACCCGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTGPRWA*SHPPGP
Trigger: TGGCCCTGGCGGGTGGCTGCAAGCCCACCTCGGCCC...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGGGGCCGAGGTGGGCTTaGAGCCACCCGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CGRVSTWSTETQWPPTAEGPRWA*SHPPGP
Trigger: TGGCCCTGGCGGGTGGCTGCAAGCCCACCTCGGCCC...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TCCTCGGAGCCCTGGGAGAGCTGCCGGAGCTGGGCGTCGAGCTGGGTGAACCGCGGCTGGGGAAAGGGGTaGCTAAACGTAGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SSEPWESCRSWASSWVNRGWGKG*LNVEPE
Trigger: CTCTGGCTCTACGTTTAGGCACCCCTTTCCCCAGCC...GCGGTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp ATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGCCCGGGGCTTGTCCTCAGCCGCGCGCTGAAAGCCCTCTaGCCCCTTGGCTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: MGGRCTVWKLGPGLVLSRALKAL*PLGSEQ
Trigger: CTGCTCAGAGCCAAGGGGGCAGAGGGCTTTCAGCGC...GCGGCTGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGCACCTGCCACCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCCGGTGTCTGCAGGGCTaGCTGCGGGCGACACAGCAA +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTRCLQG*LRATQQ
Trigger: TTGCTGTGTCGCCCGCAGGCAGCCCTGCAGACACCG...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTAGGCCTCACGGCCATTaGGCACGCCCAGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: CLRATQQGPADSGGLLEPRPHGH*ARPASR
Trigger: ACGGGAAGCTGGGCGTGCCCAATGGCCGTGAGGCCT...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GTCGCAGCAGCAGCTCAGCCTTGCGGTAGGGCCGTAGTGCCAGGAGGTGCAGCATGTGGCCTGCTGGGCTaGGCACAGTCCGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VAAAAQPCGRAVVPGGAACGLLG*AQSVSR
Trigger: CCTGCTGACGGACTGTGCCCAGCCCAGCAGGCCACA...TGCTGCACCTCCTGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGCTGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCCGGGGGTGGCATGGGTaGCAGGTGCACAGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTRGWHG*QVHSLE
Trigger: TTCCAGACTGTGCACCTGCCACCCATGCCACCCCCG...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTGAGAGCTGCCGGAGCTaGGCGTCGAGCTGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: CLRATQQGPADSGGLLEPESCRS*ASSWVN
Trigger: GTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTC...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCTACTCCTCGGAGCCCTaGGAGAGCTGCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTYSSEP*ESCRSW
Trigger: CCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGAGTA...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCGCAGCGGCTAGACCCTaGGTGTCCGAGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTAAARP*VSEERE
Trigger: CTCCCTCTCCTCGGACACCCAGGGTCTAGCCGCTGC...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCCGGGCAGTCCCGGGCTaGGACCTCCTGAAATCATCC +
Preference number: 4 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTRAVPG*DLLKSS
Trigger: GGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCG...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CAA 72 bp GCACTGGCACCACTCTTCCTGATGGCACTCGCCAAGTaGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCG +
Preference number: 4 (lower is better)
Translates to: ALAPLFLMALAK*MGVARFREGTA
Trigger: CGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAACTTGGCGAGTGCCATCAGGAAGAGTGGTGCCAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp CTGGGCCATGCTCTGCCGCGCCTTCTGGTAGGAGTCGTCGGTGGCACACACCGTTGGCACTCGCCAAGTTaGTGGGGGTTGCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: LGHALPRLLVGVVGGTHRWHSPS*WGLPAS
Trigger: GGAAGCGGGCAACCCCCATCAACTTGGCGAGTGCCA...ACGGTGTGTGCCACCGACGACTCCTACCAGAAGGCGCGGCAGAGCATGGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTCGACAGCTGAGGGCCTaGAATAGCAGGGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CLRATQQGPADSGGLLEPRQLRA*NSRAGL
Trigger: CAGGCCTGCCCTGCTATTTCAGGCCCTCAGCTGTCG...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp CTGGGCCATGCTCTGCCGCGCCTTCTGGTAGGAGTCGTCGGTGGCACACACCGTCGACAGCTGAGGGCCTaGAATAGCAGGGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGHALPRLLVGVVGGTHRRQLRA*NSRAGL
Trigger: CAGGCCTGCCCTGCTATTTCAGGCCCTCAGCTGTCG...ACGGTGTGTGCCACCGACGACTCCTACCAGAAGGCGCGGCAGAGCATGGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCCAAGTTGATGGGGGTTaGCCGCTTCCGGGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTQVDGG*PLPGGH
Trigger: GTGCCCTCCCGGAAGCGGGCAACCCCCATCAACTTG...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp ATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGCCCGGGGCTTGTCCTCAGCCGCCGTAGTGCCAGGAGGTaGAGCACTCGGTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: MGGRCTVWKLGPGLVLSRRSARR*STRSRK
Trigger: CTTCCGTGACCGAGTGCTGCACCTCCTGGCACTACG...GCGGCTGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGCACCTGCCACCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp CTGGGCCATGCTCTGCCGCGCCTTCTGGTAGGAGTCGTCGGTGGCACACACCGTTCTTCTTGGGCTTGCTaGGCGAGGGGCTGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: LGHALPRLLVGVVGGTHRSSWAC*ARGCRV
Trigger: CACACGGCAGCCCCTCGCGCAGCAAGCCCAAGAAGA...ACGGTGTGTGCCACCGACGACTCCTACCAGAAGGCGCGGCAGAGCATGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp CTGGGCCATGCTCTGCCGCGCCTTCTGGTAGGAGTCGTCGGTGGCACACACCGTGGCATGGGTGGCAGGTaGACAGTCTGGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGHALPRLLVGVVGGTHRGMGGR*TVWKLG
Trigger: GCCCAGCTTCCAGACTGTGCACCTGCCACCCATGCC...ACGGTGTGTGCCACCGACGACTCCTACCAGAAGGCGCGGCAGAGCATGGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp GTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTGGGGGATGGAGATCCAGGGCCAGACGTCTaGAGGGGCTGCCCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: VEGERPRLCGAVRLGDGDPGPDV*RGCPES
Trigger: GCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGG...ATCTCCATCCCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGCTGGGCCACCCTGTTTaGTTGCTGGAGCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWLGHPV*LLEQRP
Trigger: GGGTCTCTGCTCCAGCAAGCAAACAGGGTGGCCCAG...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCCATTTCTGTTCTCCCTaGCTGACTGCTGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCHFCSP*LTADGS
Trigger: GCTGCCATCAGCAGTCAGGCAGGGAGAACAGAAATG...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCCGCGTCTGTTGCACCTaGGGCTGGTTTCCGAAACTG +
Preference number: 4 (lower is better)
Translates to: VDGGCPLPGGHRVCCTWGRVCCT*GWFPKL
Trigger: CAGTTTCGGAAACCAGCCCCAGGTGCAACAGACGCG...GCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp TCCTCGGAGCCCTGGGAGAGCTGCCGGAGCTGGGCGTCGAGCTGGGTGAACCGCTGGACGTGGGAACACTaGAAACGCTGCAGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: SSEPWESCRSWASSWVNRWTWEH*KRCRFR
Trigger: ACGGAACCTGCAGCGTTTCCAGTGTTCCCACGTCCA...GCGGTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCCTCAAAATAGCCACCTaGGCCACCCTGTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCLKIAT*ATLFAC
Trigger: GCAAGCAAACAGGGTGGCCCAGGTGGCTATTTTGAG...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp GTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCGCTGAGCTCTCTGAGTaGAGTGCGATATCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: VDGGCPLPGGHRVCCTWGAELSE*SAISGV
Trigger: AACCCCGGATATCGCACTTCACTCAGAGAGCTCAGC...GCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCCGCTGTACTCGGCATTaGAGTCGTTCTTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCRCTRH*SRSCSS
Trigger: AGAGCTACAAGAACGACTTCAATGCCGAGTACAGCG...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp GTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCCGGTGCTGGCTCAGATaGGCATCTTCCTCGGGTTTA +
Preference number: 4 (lower is better)
Translates to: VDGGCPLPGGHRVCCTWGRCWLR*ASSSGL
Trigger: TAAACCCGAGGAAGATGCTCATCTGAGCCAGCACCG...GCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGGCGAGACAGGAGGCTaGACCCCGGAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGGETGG*TPEAAA
Trigger: GGCTGCAGCCTCCGGGGTTCAGCCTCCTGTCTCGCC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCAGGCCTGGGGGCGCTaGAAGCCCTCTGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGQAWGR*KPSAPL
Trigger: CAAGGGGGCAGAGGGCTTTCAGCGCCCCCAGGCCTG...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGAACGTCCGCGCCTCTaGGGGGCAGTCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PHALRTQLHLSTTSVILQERPRL*GAVRLG
Trigger: CCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTC...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCCTCATGTTGGCCACCTaGTGGAGGAGGCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTLMLAT*WRRPSS
Trigger: GCTGGATGGCCTCCTCCAGCAGGTGGCCAACATGAG...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAGCAGCCGCCTCTCCGTaGTCACAGTCTCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTAAASP*SQSRPL
Trigger: CAGCGGCCGAGACTGTGAGCACGGAGAGGCGGCTGC...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGGCTGCCGTGTGGCCTaGTGGGCTGGGCACAGTCCG +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGGCRVA*WAGHSP
Trigger: CGGACTGTGCCCAGCCCAGCAGGCCACACGGCAGCC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGTGCTGCGCGAGGGGCTaGCGTGTGGCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PHALRTQLHLSTTSVILQCCARG*RVACWA
Trigger: AGCCCAGCAGGCCACACGGCAGCCCCTCGCGCAGCA...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAGGCCAAGCCTGCAGCTaGCGCTGGTCGTACTCGGCG +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTGQACS*RWSYSA
Trigger: CGCCGAGTACGACCAGCGGCAGCTGCAGGCTTGGCC...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCCTGGGCCACCCTGTTTaGTTGCTGGAGCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTLGHPV*LLEQRP
Trigger: GGGTCTCTGCTCCAGCAAGCAAACAGGGTGGCCCAG...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGCTGCAGCCGCTTCTGTaGGGGCGAGGCCGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQLQPLL*GRGRAP
Trigger: GGGCGCTCGGCCTCGCCCCCACAGAAGCGGCTGCAG...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGGGTGTCCGTGCTGGCTaGTGGGCCCGGGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQGVRAG*WARGGQ
Trigger: CTGCCCACCCCGGGCCCACCAGCCAGCACGGACACC...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAGCGCACAGTGGGGGCTaGGGCAGCCGCCTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAAHSGG*GSRLSV
Trigger: CACGGAGAGGCGGCTGCCCCAGCCCCCACTGTGCGC...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCCAGGCGTCTCCGACGTaGACGTGGGAACACTGGAAA +
Preference number: 4 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTQASPT*TWEHWK
Trigger: TTTCCAGTGTTCCCACGTCCACGTCGGAGACGCCTG...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TCCTCGGAGCCCTGGGAGAGCTGCCGGAGCTGGGCGTCGAGCTGGGTGAACCGCTCTGGGGGCACCAGCTaGAGTTCTCAAAATAGCCAC +
Preference number: 4 (lower is better)
Translates to: SSEPWESCRSWASSWVNRSGGTS*SSQNSH
Trigger: GTGGCTATTTTGAGAACTCCAGCTGGTGCCCCCAGA...GCGGTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AGCCACCCGCCAGGGCCAGACGTCTGCAGGGGCTGCCCTGAAAGCCGGCGGTGCAGCAGCAGCAACAAATaGGAAACCGAGGACATCGCA +
Preference number: 4 (lower is better)
Translates to: SHPPGPDVCRGCPESRRCSSSNK*ETEDIA
Trigger: TGCGATGTCCTCGGTTTCCCATTTGTTGCTGCTGCT...GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTCTGGCCCTGGCGGGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTGGGGGATGGAGATCCCAGGACCCACAAGTaGACAGAGGGACGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VEGERPRLCGAVRLGDGDPRTHK*TEGRRE
Trigger: CTCCCTCCGTCCCTCTGTCCACTTGTGGGTCCTGGG...ATCTCCATCCCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp GTCGCAGCAGCAGCTCAGCCTTGCGGTAGGGCCGTAGTGCCAGGAGGTGCAGCAGGGTGGGATACACTGTaGGCCCTCCACAGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: VAAAAQPCGRAVVPGGAAGWDTL*ALHSQL
Trigger: GAGCTGACTGTGGAGGGCCCACAGTGTATCCCACCC...TGCTGCACCTCCTGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGCTGCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp CGATGTTGGAGAGGTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTGACAGCCCCTTGGACTaGTTCCCAGGGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RCWRGRRRTSAPLRGSQADSPLD*FPGQRG
Trigger: GCCCCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTC...AGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTACCTCTCCAACATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CAA 72 bp TGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTaGCACCTGGGGCTGGTTTCCGAAACTGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: WGLPASGRAPRL*HLGLVSETEPS
Trigger: AGAAGGTTCAGTTTCGGAAACCAGCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CAA 72 bp GTGGCAGGTGCACAGTCTGGAAGCTGGGCCCGGGGCTaGTCCTCAGCCGCCCTCTCCTTGTCTTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VAGAQSGSWARG*SSAALSLSLCF
Trigger: GAAGCACAAAGACAAGGAGAGGGCGGCTGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGCACCTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCCGGTGGCACACACCGTaGTCTTGTCCTGTATGCTGC +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTRWHTP*SCPVCC
Trigger: GCAGCATACAGGACAAGATCACGGTGTGTGCCACCG...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTAGCCGCGGGGGCAGGTaGGTGCTGGAGCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESSRGGR*VLELRV
Trigger: CACCCTCAGCTCCAGCACTCACCTGCCCCCGCGGCT...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAAGCCGCGGGGGCAGGTaGGTGCTGGAGCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGASRGGR*VLELRV
Trigger: CACCCTCAGCTCCAGCACTCACCTGCCCCCGCGGCT...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAGGCCCAGGTCATTGCTaGCATCGGCCAGGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTGPGHC*HRPGGR
Trigger: ACGACCCCCTGGCCGATGTCAGCAATGACCTGGGCC...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGGCCCTTGGCTTCCTTaGAATCGGATAGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWGPWLP*NRIDGL
Trigger: GAGGCCATCTATCCGATTTCAAGGAAGCCAAGGGCC...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCTCCGCCTGGGCCATaGTCTGCCGCGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGPPPGP*SAAPSG
Trigger: ACCAGAAGGCGCGGCAGAGCATGGCCCAGGCGGAGG...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTGGGGGATGGAGATCTCATGTTGGCCACCTaGTGGAGGAGGCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: VEGERPRLCGAVRLGDGDLMLAT*WRRPSS
Trigger: GCTGGATGGCCTCCTCCAGCAGGTGGCCAACATGAG...ATCTCCATCCCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp GTCGCAGCAGCAGCTCAGCCTTGCGGTAGGGCCGTAGTGCCAGGAGGTGCAGCAATGAAATCAGGAGGCTaGAGCCGCTTCTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: VAAAAQPCGRAVVPGGAAMKSGG*SRFCGG
Trigger: GCCCCCACAGAAGCGGCTGCAGCCTCCTGATTTCAT...TGCTGCACCTCCTGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGCTGCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGCTGAACCCCGGAGGCTaGAGCCAGGGAGGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: CGRVSTWSTETQWPPTAELNPGG*SQGGGS
Trigger: ACTGCCTCCTCCCTGGCTGCAGCCTCCGGGGTTCAG...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCAGCAATTGGGGTGTCTaGAGAGCCTGCACCCCCAGA +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTSNWGV*RACTPR
Trigger: TCTGGGGGTGCAGGCTCTGCAGACACCCCAATTGCT...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TCCTCGGAGCCCTGGGAGAGCTGCCGGAGCTGGGCGTCGAGCTGGGTGAACCGCAGCAGCAGCAACAAATaGGAAACCGAGGACATCGCA +
Preference number: 4 (lower is better)
Translates to: SSEPWESCRSWASSWVNRSSSNK*ETEDIA
Trigger: TGCGATGTCCTCGGTTTCCCATTTGTTGCTGCTGCT...GCGGTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp CGATGTTGGAGAGGTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTACTCTCGGGCAGGGGTaGGATACACTGTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RCWRGRRRTSAPLRGSQATLGQG*DTLWAL
Trigger: GAGGGCCCACAGTGTATCCCACCCCTGCCCGAGAGT...AGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTACCTCTCCAACATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCGCTGAGCTCTCTGAGTaGAGTGCGATATCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTAELSE*SAISGV
Trigger: AACCCCGGATATCGCACTTCACTCAGAGAGCTCAGC...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCGCCCAGCTTCCCGTTaGCGGCAGGCTGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGRPASR*RQAELS
Trigger: AGAGAGCTCAGCCTGCCGTCAACGGGAAGCTGGGCG...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGGTGAGTGCTGGAGCTaGGGGTGTCCGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGGECWS*GCPCWL
Trigger: CAGCCAGCACGGACACCCTCAGCTCCAGCACTCACC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTCTGCAGGGGCTGCCCTaGAAGCCGGCGGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLLQGLP*KPAVLA
Trigger: AGCCAGCACCGCCGGCTTTCAGGGCAGCCCCTGCAG...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCGGCGAGACAGGAGGCTaGACCCCGGAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVGETGG*TPEAAA
Trigger: GGCTGCAGCCTCCGGGGTTCAGCCTCCTGTCTCGCC...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCGAACGTCCGCGCCTCTaGGGGGCAGTCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVERPRL*GAVRLG
Trigger: CCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTC...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp GTCGCAGCAGCAGCTCAGCCTTGCGGTAGGGCCGTAGTGCCAGGAGGTGCAGCAGAAACTGAACCTTCTTaGCCAGGTAGCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VAAAAQPCGRAVVPGGAAETEPS*PGSGLQ
Trigger: CTGGAGGCCGCTACCTGGGCAAGAAGGTTCAGTTTC...TGCTGCACCTCCTGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGCTGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGGGCACCGCGTCTGTTaGACCTGGGGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: PHALRTQLHLSTTSVILQGHRVC*TWGWFP
Trigger: CGGAAACCAGCCCCAGGTGCAACAGACGCGGTGCCC...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCGGGCACCGCGTCTGTTaGACCTGGGGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGGHRVC*TWGWFP
Trigger: CGGAAACCAGCCCCAGGTGCAACAGACGCGGTGCCC...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCATCTGGGACACCCCGCTaGCCCCACTCACGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGASGTPR*PHSRHW
Trigger: CCAGTGCCGTGAGTGGGGGCAGCGGGGTGTCCCAGA...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAGCAGCAGCTCAGCCTTaGGGTAGGGCCGTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTAAAQP*GRAVVP
Trigger: TGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGC...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGCGTCCTTGTCCGCCTaGGTCAGGCCGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGASLSA*VRPSFC
Trigger: GCAGAAGGACGGCCTGACGCAGGCGGACAAGGACGC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAGCAGCCGCCTCTCCGTaGTCACAGTCTCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAAAASP*SQSRPL
Trigger: CAGCGGCCGAGACTGTGAGCACGGAGAGGCGGCTGC...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTTGCTGCGCGAGGGGCTaGCGTGTGGCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLCCARG*RVACWA
Trigger: AGCCCAGCAGGCCACACGGCAGCCCCTCGCGCAGCA...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCTCTTCTTGGGCTTGCTaGGCGAGGGGCTGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: SLTPLRPSLNLEHRNTVASSWAC*ARGCRV
Trigger: CACACGGCAGCCCCTCGCGCAGCAAGCCCAAGAAGA...GGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGTGGGCCAGCTTGCTGTaGAGGTACTCGCAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: CGRVSTWSTETQWPPTAEWASLL*RYSQRC
Trigger: GCACCGCTGCGAGTACCTGCACAGCAAGCTGGCCCA...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp CGATGTTGGAGAGGTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTTCTCTCACCGCCTTTTaGTCCCCCGACCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RCWRGRRRTSAPLRGSQASLTAF*SPDPPR
Trigger: TCTGGGAGGGTCGGGGGAGCAAAAGGCGGTGAGAGA...AGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTACCTCTCCAACATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTGACGTCTGCAGGGGCTaGCCTGAAAGCCGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESDVCRG*PESRRC
Trigger: GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTC...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACACAGCCCCTCCCTGAGTaGAAACCTTGGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTQPLPE*KPWRWL
Trigger: GAGCCACCGCCAAGGTTTGCACTCAGGGAGGGGCTG...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGCGGTGTCTGCAGGGCTaGCTGCGGGCGACACAGCAA +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGRCLQG*LRATQQ
Trigger: TTGCTGTGTCGCCCGCAGGCAGCCCTGCAGACACCG...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACACCAGTGCTCTGTGGCTaGCACAGCTTCCGGACGAGC +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTPVLCG*HSFRTS
Trigger: GCTCGTCCGGAAGCTGTGCCAGCCACAGAGCACTGG...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACACGGGGGTGGCATGGGTaGCAGGTGCACAGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTRGWHG*QVHSLE
Trigger: TTCCAGACTGTGCACCTGCCACCCATGCCACCCCCG...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGCTCCGGGGGTGGCATaGGTGGCAGGTGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGAPGVA*VAGAQS
Trigger: AGACTGTGCACCTGCCACCCATGCCACCCCCGGAGC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGAGAGCTGCCGGAGCTaGGCGTCGAGCTGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: PHALRTQLHLSTTSVILQESCRS*ASSWVN
Trigger: GTTCACCCAGCTCGACGCCCAGCTCCGGCAGCTCTC...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGCCTGCAGCTGCCGCTaGTCGTACTCGGCGATGAGC +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGACSCR*SYSAMS
Trigger: GCTCATCGCCGAGTACGACCAGCGGCAGCTGCAGGC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCGGCCGAGTCTCAACTTaGAGCACAGAAACACAGTGG +
Preference number: 4 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTGRVST*STETQW
Trigger: CCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCC...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCCATGTGATCCCTaGGCCCTGAGTCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGPPCDP*ALSHSR
Trigger: GCGGCTGTGACTCAGGGCCCAGGGATCACATGGGGG...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTCCACAGTCAGCTCTTTaGAAGCTGTCAGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: CLRATQQGPADSGGLLEPPQSAL*KLSGGT
Trigger: GGTGCCTCCTGACAGCTTCCAAAGAGCTGACTGTGG...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGCGGGCAGTCCCGGGCTaGGACCTCCTGAAATCATCC +
Preference number: 4 (lower is better)
Translates to: CGRVSTWSTETQWPPTAERAVPG*DLLKSS
Trigger: GGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCG...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTGGGGGATGGAGATCAACTGACAGCCCCTTaGACTGGTTCCCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VEGERPRLCGAVRLGDGDQLTAP*TGSQGR
Trigger: TCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTG...ATCTCCATCCCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CAA 72 bp TGCAGCTGCCGCTGGTCGTACTCGGCGATGAGCCTCTaGATGTGGGCCAGCTTGCTGTGCAGGTACTCGCAG +
Preference number: 4 (lower is better)
Translates to: CSCRWSYSAMSL*MWASLLCRYSQ
Trigger: CTGCGAGTACCTGCACAGCAAGCTGGCCCACATCAAGAGGCTCATCGCCGAGTACGACCAGCGGCAGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp ATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGCCCGGGGCTTGTCCTCAGCCGCGATAGATGGCCTCAGTaGAACAGAATCCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: MGGRCTVWKLGPGLVLSRDRWPQ*NRILSG
Trigger: GCCAGACAGGATTCTGTTTCACTGAGGCCATCTATC...GCGGCTGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGCACCTGCCACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCGCCCAGCTTCCCGTTaGCGGCAGGCTGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESRPASR*RQAELS
Trigger: AGAGAGCTCAGCCTGCCGTCAACGGGAAGCTGGGCG...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGGGTGAGTGCTGGAGCTaGGGGTGTCCGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQGECWS*GCPCWL
Trigger: CAGCCAGCACGGACACCCTCAGCTCCAGCACTCACC...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTGTGGCCCCCGACAGCTaGGGGCCTGAAATAGCAGGG +
Preference number: 4 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESVAPDS*GPEIAG
Trigger: CCCTGCTATTTCAGGCCCTCAGCTGTCGGGGGCCAC...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGCGGGCTGGGACCTCCTaGAATCATCCCACCTCACCG +
Preference number: 4 (lower is better)
Translates to: PHALRTQLHLSTTSVILQRAGTS*NHPTSP
Trigger: CGGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCG...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGCGTAGTGCCAGGAGGTaGAGCACTCGGTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: CGRVSTWSTETQWPPTAERSARR*STRSRK
Trigger: CTTCCGTGACCGAGTGCTGCACCTCCTGGCACTACG...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGGTCAGGCCGTCCTTCTaGAGTCGCAGCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: CGRVSTWSTETQWPPTAEVRPSF*SRSSSS
Trigger: TGAGCTGCTGCTGCGACTGCAGAAGGACGGCCTGAC...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCTTGTACATGCAGTCCTaGAGTGTACACGTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTLYMQS*SVHVPS
Trigger: GGACGGCACGTGTACACTGCAGGACTGCATGTACAA...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp ATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGCCCGGGGCTTGTCCTCAGCCGCGCACATCCTTGTACATaGAGTCCTGCAGTGTACACG +
Preference number: 4 (lower is better)
Translates to: MGGRCTVWKLGPGLVLSRAHPCT*SPAVYT
Trigger: CGTGTACACTGCAGGACTGCATGTACAAGGATGTGC...GCGGCTGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGCACCTGCCACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTCCAGGCCAGTCCTTCTaGACATCCTTGTACATGCAG +
Preference number: 4 (lower is better)
Translates to: CLRATQQGPADSGGLLEPPGQSF*TSLYMQ
Trigger: CTGCATGTACAAGGATGTGCAGAAGGACTGGCCTGG...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGGTCTCCAAGGAGGCTaGCAGTGCTCTGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGGLQGG*QCSVAG
Trigger: GCCAGCCACAGAGCACTGGCAGCCTCCTTGGAGACC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCGGCATGGGTGGCAGGTaGACAGTCTGGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGGMGGR*TVWKLG
Trigger: GCCCAGCTTCCAGACTGTGCACCTGCCACCCATGCC...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGACGTCTGCAGGGGCTaGCCTGAAAGCCGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLDVCRG*PESRRC
Trigger: GCACCGCCGGCTTTCAGGGCAGCCCCTGCAGACGTC...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp CGTTCTTGTAGCTCTGGCGCTGCTCCGAAGAGGAGATGGCTGCGTACTTCAGCACTGAACCCCGGAGGCTaGAGCCAGGGAGGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RSCSSGAAPKRRWLRTSALNPGG*SQGGGS
Trigger: ACTGCCTCCTCCCTGGCTGCAGCCTCCGGGGTTCAG...TGCTGAAGTACGCAGCCATCTCCTCTTCGGAGCAGCGCCAGAGCTACAAGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGCAGTCGAAGCTGCCCTaGGGGTTGTCGCGGCCGATG +
Preference number: 4 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQQSKLP*GLSRPM
Trigger: CATCGGCCGCGACAACCCCCAGGGCAGCTTCGACTG...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTGGGGGATGGAGATCTGGAGACATACTGCTaGATGCAGTCGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VEGERPRLCGAVRLGDGDLETYC*MQSKLP
Trigger: GGGCAGCTTCGACTGCATCCAGCAGTATGTCTCCAG...ATCTCCATCCCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGATGTTGGCCACCTGCTaGAGGAGGCCATCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: PHALRTQLHLSTTSVILQMLATC*RRPSSA
Trigger: CGCGCTGGATGGCCTCCTCCAGCAGGTGGCCAACAT...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp CGATGTTGGAGAGGTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTTCTTGGACTTCTTCTTaGGCTTGCTGCGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RCWRGRRRTSAPLRGSQASWTSS*ACCARG
Trigger: GCCCCTCGCGCAGCAAGCCCAAGAAGAAGTCCAAGA...AGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTACCTCTCCAACATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGCACAGTCTGGAAGCTaGGCCCGGGGCTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGAQSGS*ARGLSS
Trigger: TGAGGACAAGCCCCGGGCCCAGCTTCCAGACTGTGC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGAGCTGGGCGTCGAGCTaGGTGAACCGCCGCGTGATG +
Preference number: 4 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQSWASS*VNRRVM
Trigger: CATCACGCGGCGGTTCACCCAGCTCGACGCCCAGCT...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGTACTCCTCGGAGCCCTaGGAGAGCTGCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQYSSEP*ESCRSW
Trigger: CCAGCTCCGGCAGCTCTCCCAGGGCTCCGAGGAGTA...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAGCAGCGGCTAGACCCTaGGTGTCCGAGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAAAARP*VSEERE
Trigger: CTCCCTCTCCTCGGACACCCAGGGTCTAGCCGCTGC...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GCAGAGGGGCGGGCAGTCCCGGGCTGGGACCTCCTGAAATCATCCCACCTCACCTCATTCAGCCCTAAATaGGAACACACGCCTCAGACC +
Preference number: 4 (lower is better)
Translates to: AEGRAVPGWDLLKSSHLTSFSPK*EHTPQT
Trigger: GGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGA...GGTGAGGTGGGATGATTTCAGGAGGTCCCAGCCCGGGACTGCCCGCCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGGTTTCCTCGGAGCTCTaGGAACCCGGGGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CGRVSTWSTETQWPPTAEVSSEL*EPGGPK
Trigger: TTTGGGACCCCCGGGTTCCCAGAGCTCCGAGGAAAC...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
3UTR CAA 72 bp GCCCGGGGCTTGTCCTCAGCCGCCCTCTCCTTGTCTTaGTGCTTCTTGGACTTCTTCTTGGGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ARGLSSAALSLS*CFLDFFLGLLR
Trigger: GCGCAGCAAGCCCAAGAAGAAGTCCAAGAAGCACAAAGACAAGGAGAGGGCGGCTGAGGACAAGCCCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
3UTR CAA 72 bp TCGTACTCGGCGATGAGCCTCTTGATGTGGGCCAGCTaGCTGTGCAGGTACTCGCAGCGGTGCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SYSAMSLLMWAS*LCRYSQRCFSW
Trigger: CCAGGAGAAGCACCGCTGCGAGTACCTGCACAGCAAGCTGGCCCACATCAAGAGGCTCATCGCCGAGTACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCGATAGATGGCCTCAGTaGAACAGAATCCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTDRWPQ*NRILSG
Trigger: GCCAGACAGGATTCTGTTTCACTGAGGCCATCTATC...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAGCAGCAGCTCAGCCTTaGGGTAGGGCCGTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAAAAQP*GRAVVP
Trigger: TGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGC...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCGTCAGGCCGTCCTTCTaGAGTCGCAGCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGVRPSF*SRSSSS
Trigger: TGAGCTGCTGCTGCGACTGCAGAAGGACGGCCTGAC...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TGTCCTGTATGCTGCCCAGGCAGTCCAGGTGAACTTCCCCATGACTGGAGACATGCGTCCTTGTCCGCCTaGGTCAGGCCGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CPVCCPGSPGELPHDWRHASLSA*VRPSFC
Trigger: GCAGAAGGACGGCCTGACGCAGGCGGACAAGGACGC...ATGTCTCCAGTCATGGGGAAGTTCACCTGGACTGCCTGGGCAGCATACAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp CGTTCTTGTAGCTCTGGCGCTGCTCCGAAGAGGAGATGGCTGCGTACTTCAGCAGGTCTCCAAGGAGGCTaGCAGTGCTCTGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RSCSSGAAPKRRWLRTSAGLQGG*QCSVAG
Trigger: GCCAGCCACAGAGCACTGGCAGCCTCCTTGGAGACC...TGCTGAAGTACGCAGCCATCTCCTCTTCGGAGCAGCGCCAGAGCTACAAGAACG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGAGGCTGCCGTGTGGCCTaGTGGGCTGGGCACAGTCCG +
Preference number: 4 (lower is better)
Translates to: IFLQNLPSSSLILLGALGGCRVA*WAGHSP
Trigger: CGGACTGTGCCCAGCCCAGCAGGCCACACGGCAGCC...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGACTTCTTCTTGGGCTTaGTGCGCGAGGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: PHALRTQLHLSTTSVILQTSSWA*CARGCR
Trigger: ACGGCAGCCCCTCGCGCAGCAAGCCCAAGAAGAAGT...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCATGGGCCAGCTTGCTGTaGAGGTACTCGCAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAWASLL*RYSQRC
Trigger: GCACCGCTGCGAGTACCTGCACAGCAAGCTGGCCCA...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGTCTCTCACCGCCTTTTaGTCCCCCGACCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGSLTAF*SPDPPR
Trigger: TCTGGGAGGGTCGGGGGAGCAAAAGGCGGTGAGAGA...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGGCGCTGAAAGCCCTCTaGCCCCTTGGCTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQALKAL*PLGSEQ
Trigger: CTGCTCAGAGCCAAGGGGGCAGAGGGCTTTCAGCGC...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGGTCTCCTCCTCCGCCTaGGCCATGCTCTGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRVSSSA*AMLCRA
Trigger: GGCGCGGCAGAGCATGGCCCAGGCGGAGGAGGAGAC...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AGACCAGCAGAGGCCACCTGCCCATTCCCCACGCCCTCAGAACGCAGCTGCACCTGTTGCACCTGGGGCTaGTTTCCGAAACTGAACCTT +
Preference number: 4 (lower is better)
Translates to: RPAEATCPFPTPSERSCTCCTWG*FPKLNL
Trigger: AAGGTTCAGTTTCGGAAACCAGCCCCAGGTGCAACA...GGTGCAGCTGCGTTCTGAGGGCGTGGGGAATGGGCAGGTGGCCTCTGCTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GTCGCAGCAGCAGCTCAGCCTTGCGGTAGGGCCGTAGTGCCAGGAGGTGCAGCATGTTGCACCTGGGGCTaGTTTCCGAAACTGAACCTT +
Preference number: 4 (lower is better)
Translates to: VAAAAQPCGRAVVPGGAACCTWG*FPKLNL
Trigger: AAGGTTCAGTTTCGGAAACCAGCCCCAGGTGCAACA...TGCTGCACCTCCTGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGCTGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCAGTCTCGGCCGCTGTaGCCCAGGTCATTGCTGACA +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGQSRPL*PRSLLT
Trigger: TGTCAGCAATGACCTGGGCCACAGCGGCCGAGACTG...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCGGCAGGTGCACAGTCTaGAAGCTGGGCCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVGRCTV*KLGPGL
Trigger: AAGCCCCGGGCCCAGCTTCCAGACTGTGCACCTGCC...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACACAGGCGTCTCCGACGTaGACGTGGGAACACTGGAAA +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTQASPT*TWEHWK
Trigger: TTTCCAGTGTTCCCACGTCCACGTCGGAGACGCCTG...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAAGGCAGTGGGCTTCCTaGGGAGCCCATCATAAGCAG +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTRQWAS*GAHHKQ
Trigger: CTGCTTATGATGGGCTCCCCAGGAAGCCCACTGCCT...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAGGCCTAGGAGTCTTCTaGCGAGACAGGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTGLGVF*RDRRLN
Trigger: GTTCAGCCTCCTGTCTCGCCAGAAGACTCCTAGGCC...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TGTCCTGTATGCTGCCCAGGCAGTCCAGGTGAACTTCCCCATGACTGGAGACATCCCCCATGTGATCCCTaGGCCCTGAGTCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: CPVCCPGSPGELPHDWRHPPCDP*ALSHSR
Trigger: GCGGCTGTGACTCAGGGCCCAGGGATCACATGGGGG...ATGTCTCCAGTCATGGGGAAGTTCACCTGGACTGCCTGGGCAGCATACAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTACTCTCGGGCAGGGGTaGGATACACTGTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESTLGQG*DTLWAL
Trigger: GAGGGCCCACAGTGTATCCCACCCCTGCCCGAGAGT...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGCAACTGACAGCCCCTTaGACTGGTTCCCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CGRVSTWSTETQWPPTAEQLTAP*TGSQGR
Trigger: TCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTG...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGTCAGGGCACTGTCGGTaGGCTTCACGTGGAACACCG +
Preference number: 4 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQSGHCR*ASRGTP
Trigger: CGGTGTTCCACGTGAAGCTCACCGACAGTGCCCTGA...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCATCAGGGCACTGTCGGTaGGCTTCACGTGGAACACCG +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGASGHCR*ASRGTP
Trigger: CGGTGTTCCACGTGAAGCTCACCGACAGTGCCCTGA...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCATGAAATCAGGAGGCTaGAGCCGCTTCTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGMKSGG*SRFCGG
Trigger: GCCCCCACAGAAGCGGCTGCAGCCTCCTGATTTCAT...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAATCATAAGCAGGGACTaGTCAGGAAGCGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTIISRD*SGSAGR
Trigger: CCTCCCTGCGCTTCCTGAGCAGTCCCTGCTTATGAT...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCTCAGAACGCAGCTaGACCTTTCGACGACCTCTG +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGPSERS*TFRRPL
Trigger: CAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGG...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAGCCACCCTGTTTGCTTaGTGGAGCAGAGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAATLFA*WSRDPA
Trigger: GGCAGGGTCTCTGCTCCAGCAAGCAAACAGGGTGGC...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGCACCTCACCGGTGTCTaGAGGGCTGCCTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRHLTGV*RAACGR
Trigger: TCGCCCGCAGGCAGCCCTGCAGACACCGGTGAGGTG...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACCCCACATCCAGCTGTaGAGAGCTCTCAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAPHIQL*RALRPL
Trigger: CAAGGGCCTGAGAGCTCTGCACAGCTGGATGTGGGG...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp GTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTGGGGGATGGAGATGAACTTCCCCATGACTaGAGACATACTGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: VEGERPRLCGAVRLGDGDELPHD*RHTAGC
Trigger: GCATCCAGCAGTATGTCTCCAGTCATGGGGAAGTTC...ATCTCCATCCCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGTCACGGAAGGGCCTCTaGGACACCCCGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRSRKGL*DTPLPP
Trigger: TGGGGGCAGCGGGGTGTCCCAGAGGCCCTTCCGTGA...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TGTCCTGTATGCTGCCCAGGCAGTCCAGGTGAACTTCCCCATGACTGGAGACATATGTTGGCCACCTGCTaGAGGAGGCCATCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: CPVCCPGSPGELPHDWRHMLATC*RRPSSA
Trigger: CGCGCTGGATGGCCTCCTCCAGCAGGTGGCCAACAT...ATGTCTCCAGTCATGGGGAAGTTCACCTGGACTGCCTGGGCAGCATACAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGCTGCCAGTGCTCTGTaGCTGGCACAGCTTCCGGAC +
Preference number: 4 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLAASAL*LAQLPD
Trigger: GTCCGGAAGCTGTGCCAGCCACAGAGCACTGGCAGC...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGTCTTGGACTTCTTCTTaGGCTTGCTGCGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGSWTSS*ACCARG
Trigger: GCCCCTCGCGCAGCAAGCCCAAGAAGAAGTCCAAGA...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGACCTGGGGTGTCTGCTaGGGCTCCGGGGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRTWGVC*GSGGGM
Trigger: CATGCCACCCCCGGAGCCCCAGCAGACACCCCAGGT...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGATGAGCCTCTTGATGTaGGCCAGCTTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: CGRVSTWSTETQWPPTAEMSLLM*ASLLCR
Trigger: CCTGCACAGCAAGCTGGCCCACATCAAGAGGCTCAT...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAAGCACAGAAACACAGTaGCCCCCGACAGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGASTETQ*PPTAEG
Trigger: GCCCTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCT...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAGGGTGGGATACACTGTaGGCCCTCCACAGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAGWDTL*ALHSQL
Trigger: GAGCTGACTGTGGAGGGCCCACAGTGTATCCCACCC...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCGGTGCTGGCTCAGATaGGCATCTTCCTCGGGTTTA +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGRCWLR*ASSSGL
Trigger: TAAACCCGAGGAAGATGCTCATCTGAGCCAGCACCG...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACACCAGGCCAGTCCTTCTaGACATCCTTGTACATGCAG +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTPGQSF*TSLYMQ
Trigger: CTGCATGTACAAGGATGTGCAGAAGGACTGGCCTGG...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp TGTCCTGTATGCTGCCCAGGCAGTCCAGGTGAACTTCCCCATGACTGGAGACATACTTCTTCTTGGGCTTaGTGCGCGAGGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: CPVCCPGSPGELPHDWRHTSSWA*CARGCR
Trigger: ACGGCAGCCCCTCGCGCAGCAAGCCCAAGAAGAAGT...ATGTCTCCAGTCATGGGGAAGTTCACCTGGACTGCCTGGGCAGCATACAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGCCCTCAGAACGCAGCTaGACCTTTCGACGACCTCTG +
Preference number: 4 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQPSERS*TFRRPL
Trigger: CAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGG...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCGCCACCCTGTTTGCTTaGTGGAGCAGAGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVATLFA*WSRDPA
Trigger: GGCAGGGTCTCTGCTCCAGCAAGCAAACAGGGTGGC...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGTCGGTGAGCTTCACGTaGAACACCGACACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGSVSFT*NTDTLL
Trigger: CAGCAAGGTGTCGGTGTTCCACGTGAAGCTCACCGA...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCAAACAGAATCCTGTCTaGCGCGGTAGCTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: SLTPLRPSLNLEHRNTVAKQNPV*RGSSRR
Trigger: CCTTCGAGAGCTACCGCGCCAGACAGGATTCTGTTT...GGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGTGTGGCCTGCTGGGCTaGGCACAGTCCGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRCGLLG*AQSVSR
Trigger: CCTGCTGACGGACTGTGCCCAGCCCAGCAGGCCACA...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGGGCAGGTGCACAGTCTaGAAGCTGGGCCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRGRCTV*KLGPGL
Trigger: AAGCCCCGGGCCCAGCTTCCAGACTGTGCACCTGCC...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGAAGCTGGGCGTCGAGCTaGGTGAACCGCCGCGTGATG +
Preference number: 4 (lower is better)
Translates to: IFLQNLPSSSLILLGALGSWASS*VNRRVM
Trigger: CATCACGCGGCGGTTCACCCAGCTCGACGCCCAGCT...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGATGAGCCTCTTGATGTaGGCCAGCTTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGMSLLM*ASLLCR
Trigger: CCTGCACAGCAAGCTGGCCCACATCAAGAGGCTCAT...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGAGCCTGCAGCTGCCGCTaGTCGTACTCGGCGATGAGC +
Preference number: 4 (lower is better)
Translates to: IFLQNLPSSSLILLGALGACSCR*SYSAMS
Trigger: GCTCATCGCCGAGTACGACCAGCGGCAGCTGCAGGC...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACACTCAAAATAGCCACCTaGGCCACCCTGTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTLKIAT*ATLFAC
Trigger: GCAAGCAAACAGGGTGGCCCAGGTGGCTATTTTGAG...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCTCTGGGGGCACCAGCTaGAGTTCTCAAAATAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLTPLRPSLNLEHRNTVASGGTS*SSQNSH
Trigger: GTGGCTATTTTGAGAACTCCAGCTGGTGCCCCCAGA...GGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCGTTTCCTCGGAGCTCTaGGAACCCGGGGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVVSSEL*EPGGPK
Trigger: TTTGGGACCCCCGGGTTCCCAGAGCTCCGAGGAAAC...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGACTCTGGAGGCCTCCTaGAGCCTGCTCGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRTLEAS*SLLGPS
Trigger: GGAAGGGCCGAGCAGGCTCCAGGAGGCCTCCAGAGT...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGGACAGCCCCTTGGACTaGTTCCCAGGGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRDSPLD*FPGQRG
Trigger: GCCCCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTC...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGTGGCACTCGCCAAGTTaGTGGGGGTTGCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRWHSPS*WGLPAS
Trigger: GGAAGCGGGCAACCCCCATCAACTTGGCGAGTGCCA...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp GTTGATGGGGGTTGCCCGCTTCCGGGAGGGCACCGCGTCTGTTGCACCTGGGGCTGGTGTTGGTCTTTTTaGTTTTTCGATATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VDGGCPLPGGHRVCCTWGWCWSF*FFDIPA
Trigger: TGCAGGAATATCGAAAAATCAAAAAGACCAACACCA...GCCCCAGGTGCAACAGACGCGGTGCCCTCCCGGAAGCGGGCAACCCCCATCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGAGACATACTGCTGGATaGAGTCGAAGCTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQRHTAG*SRSCPG
Trigger: CCCAGGGCAGCTTCGACTGCATCCAGCAGTATGTCT...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGTCTTGTCCTGTATGCTaGCCAGGCAGTCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGSCPVC*PGSPGE
Trigger: TTCACCTGGACTGCCTGGGCAGCATACAGGACAAGA...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGTTGTACATGCAGTCCTaGAGTGTACACGTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGLYMQS*SVHVPS
Trigger: GGACGGCACGTGTACACTGCAGGACTGCATGTACAA...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp CGTTCTTGTAGCTCTGGCGCTGCTCCGAAGAGGAGATGGCTGCGTACTTCAGCAATCATAAGCAGGGACTaGTCAGGAAGCGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RSCSSGAAPKRRWLRTSAIISRD*SGSAGR
Trigger: CCTCCCTGCGCTTCCTGAGCAGTCCCTGCTTATGAT...TGCTGAAGTACGCAGCCATCTCCTCTTCGGAGCAGCGCCAGAGCTACAAGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCAGCAATTGGGGTGTCTaGAGAGCCTGCACCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVSNWGV*RACTPR
Trigger: TCTGGGGGTGCAGGCTCTGCAGACACCCCAATTGCT...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGCATTTCTGTTCTCCCTaGCTGACTGCTGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGHFCSP*LTADGS
Trigger: GCTGCCATCAGCAGTCAGGCAGGGAGAACAGAAATG...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCTGGAGACATACTGCTaGATGCAGTCGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESLETYC*MQSKLP
Trigger: GGGCAGCTTCGACTGCATCCAGCAGTATGTCTCCAG...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGACCAGTGCTCTGTGGCTaGCACAGCTTCCGGACGAGC +
Preference number: 4 (lower is better)
Translates to: IFLQNLPSSSLILLGALGPVLCG*HSFRTS
Trigger: GCTCGTCCGGAAGCTGTGCCAGCCACAGAGCACTGG...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCGCTCCGAAGAGGAGATaGCTGCGTACTTCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGAPKRR*LRTSAS
Trigger: ACTTGCTGAAGTACGCAGCCATCTCCTCTTCGGAGC...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTAGGCAGTGGGCTTCCTaGGGAGCCCATCATAAGCAG +
Preference number: 4 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLRQWAS*GAHHKQ
Trigger: CTGCTTATGATGGGCTCCCCAGGAAGCCCACTGCCT...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTAGTCAGGCTGGGGGATaGAGATGTGCTGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLSQAGG*RCAGSP
Trigger: TGGGCTTCCAGCACATCTCCATCCCCCAGCCTGACT...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGTCGCAAAGAAAAGTCTaGCGCCGCTGCGGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRSQRKV*RRCGRV
Trigger: GACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGA...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGTCTTGTCCTGTATGCTaGCCAGGCAGTCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQSCPVC*PGSPGE
Trigger: TTCACCTGGACTGCCTGGGCAGCATACAGGACAAGA...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGACAAGGAGGCTGCCAGTaGTCTGTGGCTGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: IFLQNLPSSSLILLGALGQGGCQ*SVAGTA
Trigger: AGCTGTGCCAGCCACAGAGCACTGGCAGCCTCCTTG...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACAGAACACTGGAAACGCTaGAGGTTCCGTTTAAACCTG +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTEHWKR*RFRLNL
Trigger: CAGGTTTAAACGGAACCTGCAGCGTTTCCAGTGTTC...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTTGGGGGATGGAGATGTaGTGGAAGCCCATGGATCAT +
Preference number: 4 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESWGMEM*WKPMDH
Trigger: ATGATCCATGGGCTTCCAGCACATCTCCATCCCCCA...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTTCGGTGAGCTTCACGTaGAACACCGACACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLSVSFT*NTDTLL
Trigger: CAGCAAGGTGTCGGTGTTCCACGTGAAGCTCACCGA...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTGCTCCGAAGAGGAGATaGCTGCGTACTTCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESAPKRR*LRTSAS
Trigger: ACTTGCTGAAGTACGCAGCCATCTCCTCTTCGGAGC...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTCCACAGTCAGCTCTTTaGAAGCTGTCAGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLPQSAL*KLSGGT
Trigger: GGTGCCTCCTGACAGCTTCCAAAGAGCTGACTGTGG...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTTGCCCTTGGCTTCCTTaGAATCGGATAGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLCPWLP*NRIDGL
Trigger: GAGGCCATCTATCCGATTTCAAGGAAGCCAAGGGCA...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262809.9
CDS-3UTR TCA 90 bp CGATGTTGGAGAGGTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTACAGCTATTGAAACATaGAGGATCAGTTTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: RCWRGRRRTSAPLRGSQATAIET*RISFLG
Trigger: TCCGAGGAAACTGATCCTTCATGTTTCAATAGCTGT...AGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTACCTCTCCAACATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGAAAGGCAAATTCAACTaGCAGCCCCTTGGACTGGTT +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGKGKFN*QPLGLV
Trigger: AACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTT...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTGCACATCCTTGTACATaGAGTCCTGCAGTGTACACG +
Preference number: 4 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESAHPCT*SPAVYT
Trigger: CGTGTACACTGCAGGACTGCATGTACAAGGATGTGC...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGAACACTGGAAACGCTaGAGGTTCCGTTTAAACCTG +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGEHWKR*RFRLNL
Trigger: CAGGTTTAAACGGAACCTGCAGCGTTTCCAGTGTTC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGCGAAGAGGAGATGGCTaGGTACTTCAGCAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQRRGDG*VLQQVV
Trigger: GACTACTTGCTGAAGTACGCAGCCATCTCCTCTTCG...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGGGCTGGGGAAAGGGGTaGCTAAACGTAGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRGWGKG*LNVEPE
Trigger: CTCTGGCTCTACGTTTAGGCACCCCTTTCCCCAGCC...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGCGCGTCTGTTGCACCTaGGGCTGGTTTCCGAAACTG +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRRVCCT*GWFPKL
Trigger: CAGTTTCGGAAACCAGCCCCAGGTGCAACAGACGCG...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGTCTCCGACGTGGACGTaGGAACACTGGAAACGCTGC +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRSPTWT*EHWKRC
Trigger: GCAGCGTTTCCAGTGTTCCCACGTCCACGTCGGAGA...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGAGGCCTAGGAGTCTTCTaGCGAGACAGGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: IFLQNLPSSSLILLGALGGLGVF*RDRRLN
Trigger: GTTCAGCCTCCTGTCTCGCCAGAAGACTCCTAGGCC...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CCA 90 bp CGATGTTGGAGAGGTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTCACCTTTCCAAGTCATaGCTTCATTCAGCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: RCWRGRRRTSAPLRGSQAHLSKS*LHSALN
Trigger: ATTTAGGGCTGAATGAAGCCATGACTTGGAAAGGTG...AGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTACCTCTCCAACATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp TGTCCTGTATGCTGCCCAGGCAGTCCAGGTGAACTTCCCCATGACTGGAGACATCGCTGTACTCGGCATTaGAGTCGTTCTTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: CPVCCPGSPGELPHDWRHRCTRH*SRSCSS
Trigger: AGAGCTACAAGAACGACTTCAATGCCGAGTACAGCG...ATGTCTCCAGTCATGGGGAAGTTCACCTGGACTGCCTGGGCAGCATACAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACATATTCCTGCAAAATCTaGCCTCGAGTAGTCTCATAC +
Preference number: 4 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTYSCKI*PRVVSY
Trigger: GTATGAGACTACTCGAGGGCAGATTTTGCAGGAATA...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGTGGACGTGGGAACACTaGAAACGCTGCAGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRWTWEH*KRCRFR
Trigger: ACGGAACCTGCAGCGTTTCCAGTGTTCCCACGTCCA...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTTCATTCAGCCCTAAATaGGAACACACGCCTCAGACC +
Preference number: 4 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLSFSPK*EHTPQT
Trigger: GGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGA...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCGGGATGGAGATGTGCTaGAAGCCCATGGATCATCAT +
Preference number: 4 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVGMEMC*KPMDHH
Trigger: ATGATGATCCATGGGCTTCCAGCACATCTCCATCCC...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGTATTCCTGCAAAATCTaGCCTCGAGTAGTCTCATAC +
Preference number: 4 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGYSCKI*PRVVSY
Trigger: GTATGAGACTACTCGAGGGCAGATTTTGCAGGAATA...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGAAACAGAATCCTGTCTaGCGCGGTAGCTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRKQNPV*RGSSRR
Trigger: CCTTCGAGAGCTACCGCGCCAGACAGGATTCTGTTT...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGGGCCGAGTCTCAACTTaGAGCACAGAAACACAGTGG +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRGRVST*STETQW
Trigger: CCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCC...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAACAGCTATTGAAACATaGAGGATCAGTTTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGATAIET*RISFLG
Trigger: TCCGAGGAAACTGATCCTTCATGTTTCAATAGCTGT...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGCGAAGAGGAGATGGCTaGGTACTTCAGCAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRRRGDG*VLQQVV
Trigger: GACTACTTGCTGAAGTACGCAGCCATCTCCTCTTCG...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCTGTCTTTGTGCTTCTTaGACTTCTTCTTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVCLCAS*TSSWAC
Trigger: GCAAGCCCAAGAAGAAGTCCAAGAAGCACAAAGACA...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR TCA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGAAAAGGCAAATTCAACTaGCAGCCCCTTGGACTGGTT +
Preference number: 4 (lower is better)
Translates to: IFLQNLPSSSLILLGALGKGKFN*QPLGLV
Trigger: AACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTT...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR GCA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCATTTTTCGATATTCCTaGAAAATCTGCCCTCGAGTA +
Preference number: 4 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGIFRYS*KICPRV
Trigger: TACTCGAGGGCAGATTTTGCAGGAATATCGAAAAAT...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR TCA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCATGGTGTTGGTCTTTTTaGTTTTTCGATATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAWCWSF*FFDIPA
Trigger: TGCAGGAATATCGAAAAATCAAAAAGACCAACACCA...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR GCA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTATTTTTCGATATTCCTaGAAAATCTGCCCTCGAGTA +
Preference number: 4 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESIFRYS*KICPRV
Trigger: TACTCGAGGGCAGATTTTGCAGGAATATCGAAAAAT...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGTGTCTTTGTGCTTCTTaGACTTCTTCTTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRCLCAS*TSSWAC
Trigger: GCAAGCCCAAGAAGAAGTCCAAGAAGCACAAAGACA...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CCA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGCACCTTTCCAAGTCATaGCTTCATTCAGCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRHLSKS*LHSALN
Trigger: ATTTAGGGCTGAATGAAGCCATGACTTGGAAAGGTG...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS CCA 90 bp CTGGGGAAGGGCCAGACTCTGGGGCCACCAAGCTCGTGGTGGCGATaGTGCGCGCCCAAGTGGGCCCTGGCTCCCGCCAGAGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LGKGQTLGPPSSWWR*CAPKWALAPARARA
Trigger: TGCCCTGGCTCTGGCGGGAGCCAGGGCCCACTTGGGCGCGCACCATCGCCACCACGAGCTTGGTGGCCCCAGAGTCTGGCCCTTCCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608165.1
CDS-3UTR CAA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTAAGGCCTCACGGCCATaGGGCACGCCCAGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: CLRATQQGPADSGGLLEPKASRP*GTPSFP
Trigger: CGGGAAGCTGGGCGTGCCCAATGGCCGTGAGGCCTT...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGCTGTGGCCCAGGTCATaGCTGACATCGGCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWLWPRS*LTSARG
Trigger: CCCCCTGGCCGATGTCAGCAATGACCTGGGCCACAG...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CAA 90 bp TGCCTGCGGGCGACACAGCAAGGTCCAGCTGACTCTGGAGGCCTCCTGGAGCCTGACTTCTTCTTGGGCTaGCTGCGCGAGGGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: CLRATQQGPADSGGLLEPDFFLG*LREGLP
Trigger: CGGCAGCCCCTCGCGCAGCAAGCCCAAGAAGAAGTC...AGGCTCCAGGAGGCCTCCAGAGTCAGCTGGACCTTGCTGTGTCGCCCGCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp AGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCAGCTGGGCCCGGGGCTaGTCCTCAGCCGCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SLTPLRPSLNLEHRNTVASWARG*SSAALS
Trigger: GGAGAGGGCGGCTGAGGACAAGCCCCGGGCCCAGCT...GGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGGCCACCCTGTTTGCTaGCTGGAGCAGAGACCCTGC +
Preference number: 5 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWGHPVC*LEQRPC
Trigger: GCAGGGTCTCTGCTCCAGCAAGCAAACAGGGTGGCC...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS GCA 90 bp GTCGCGGCCGATGTTGGAGAGGTAGAAGGAGAACGTCCGCGCCTCTaGGGGGCAGTCAGGCTGGGGGATGGAGATGTGCCCTTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VAADVGEVEGERPRL*GAVRLGDGDVPLAS
Trigger: GGAAGCCAAGGGCACATCTCCATCCCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTACCTCTCCAACATCGGCCGCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000596124.3
CDS-3UTR CAA 90 bp GTAGAAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTGGGGGATGGAGATAGGGCACCGCGTCTGTaGCACCTGGGGCTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: VEGERPRLCGAVRLGDGDRAPRL*HLGLVS
Trigger: GGAAACCAGCCCCAGGTGCAACAGACGCGGTGCCCT...ATCTCCATCCCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTTCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CAA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCAGCTGGGCCCGGGGCTaGTCCTCAGCCGCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGSWARG*SSAALS
Trigger: GGAGAGGGCGGCTGAGGACAAGCCCCGGGCCCAGCT...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGCCATCCAGCGCGTCCTaGTCCGCCTGCGTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: PHALRTQLHLSTTSVILQPSSAS*SACVRP
Trigger: CGGCCTGACGCAGGCGGACAAGGACGCGCTGGATGG...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCCATCCAGCGCGTCCTaGTCCGCCTGCGTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESPSSAS*SACVRP
Trigger: CGGCCTGACGCAGGCGGACAAGGACGCGCTGGATGG...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGGATATCCGGGGTTTCTaGTTGGCTAGGGGGTCGATG +
Preference number: 5 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWDIRGF*LARGSM
Trigger: CATCGACCCCCTAGCCAACAAGAAACCCCGGATATC...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CAA 90 bp AGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCGACTTCTTCTTGGGCTaGCTGCGCGAGGGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: SLTPLRPSLNLEHRNTVADFFLG*LREGLP
Trigger: CGGCAGCCCCTCGCGCAGCAAGCCCAAGAAGAAGTC...GGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp GTCGCAGCAGCAGCTCAGCCTTGCGGTAGGGCCGTAGTGCCAGGAGGTGCAGCATTGATGTGGGCCAGCTaGCTGTGCAGGTACTCGCAG +
Preference number: 5 (lower is better)
Translates to: VAAAAQPCGRAVVPGGAALMWAS*LCRYSQ
Trigger: CTGCGAGTACCTGCACAGCAAGCTGGCCCACATCAA...TGCTGCACCTCCTGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGCTGCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CAA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACACTCTCTCACCGCCTTTaGCTCCCCCGACCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTLSHRL*LPRPSQ
Trigger: CTGGGAGGGTCGGGGGAGCAAAAGGCGGTGAGAGAG...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp GTCGCAGCAGCAGCTCAGCCTTGCGGTAGGGCCGTAGTGCCAGGAGGTGCAGCAGCAACAGAGCAGCAATaGGGGTGTCTGCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: VAAAAQPCGRAVVPGGAAATEQQ*GCLQSL
Trigger: CAGGCTCTGCAGACACCCCAATTGCTGCTCTGTTGC...TGCTGCACCTCCTGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGCTGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS CCA 90 bp CAGCCAAGGGGCTATCCTGGGGGCCTAGAACCCAGCCTTGCATGGTaGCAGACAGGGCCCAAACACTGCCATGAGCTGCTGCTGTACCCA +
Preference number: 5 (lower is better)
Translates to: QPRGYPGGLEPSLAW*QTGPKHCHELLLYP
Trigger: TGGGTACAGCAGCAGCTCATGGCAGTGTTTGGGCCCTGTCTGCCACCATGCAAGGCTGGGTTCTAGGCCCCCAGGATAGCCCCTTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596915.1
CDS-3UTR CAA 90 bp TCCCTGAGTGCAAACCTTGGCGGTGGCTCTGCTAAGACGACCCCAGGACCCACATGGAACACCGACACCTaGCTGCCGTCGCTAACCCGC +
Preference number: 5 (lower is better)
Translates to: SLSANLGGGSAKTTPGPTWNTDT*LPSLTR
Trigger: GCGGGTTAGCGACGGCAGCAAGGTGTCGGTGTTCCA...TGTGGGTCCTGGGGTCGTCTTAGCAGAGCCACCGCCAAGGTTTGCACTCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGAAGCTGCCCTGGGGGTaGTCGCGGCCGATGTTGGAG +
Preference number: 5 (lower is better)
Translates to: PHALRTQLHLSTTSVILQKLPWG*SRPMLE
Trigger: CTCCAACATCGGCCGCGACAACCCCCAGGGCAGCTT...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGATCCGGGGTTTCTTGTaGGCTAGGGGGTCGATGAAA +
Preference number: 5 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWIRGFL*ARGSMK
Trigger: TTTCATCGACCCCCTAGCCAACAAGAAACCCCGGAT...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CAA 90 bp CGTTCTTGTAGCTCTGGCGCTGCTCCGAAGAGGAGATGGCTGCGTACTTCAGCAAAGGCCTCACGGCCATaGGGCACGCCCAGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: RSCSSGAAPKRRWLRTSAKASRP*GTPSFP
Trigger: CGGGAAGCTGGGCGTGCCCAATGGCCGTGAGGCCTT...TGCTGAAGTACGCAGCCATCTCCTCTTCGGAGCAGCGCCAGAGCTACAAGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CAA 90 bp TCTGCTGGGGCTCCGGGGGTGGCATGGGTGGCAGGTGCACAGTCTGGAAGCTGGAGGCCCTTGGCTTCCTaGAAATCGGATAGATGGCCT +
Preference number: 5 (lower is better)
Translates to: SAGAPGVAWVAGAQSGSWRPLAS*KSDRWP
Trigger: AGGCCATCTATCCGATTTCAAGGAAGCCAAGGGCCT...CCAGCTTCCAGACTGTGCACCTGCCACCCATGCCACCCCCGGAGCCCCAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS GCA 90 bp GGCCTAGAACCCAGCCTTGCATGGTGGCAGACAGGGCCCAAACACTaGCATGAGCTGCTGCTGTACCCAGCGAGCAAGGACAGACCTGAG +
Preference number: 5 (lower is better)
Translates to: GLEPSLAWWQTGPKH*HELLLYPASKDRPE
Trigger: CTCAGGTCTGTCCTTGCTCGCTGGGTACAGCAGCAGCTCATGGCAGTGTTTGGGCCCTGTCTGCCACCATGCAAGGCTGGGTTCTAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596915.1
CDS-3UTR CAA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCAAGGGCACCGCGTCTGTaGCACCTGGGGCTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: GHRKEKSDAAAAESQLGARAPRL*HLGLVS
Trigger: GGAAACCAGCCCCAGGTGCAACAGACGCGGTGCCCT...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCTGTGGCCCAGGTCATaGCTGACATCGGCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESLWPRS*LTSARG
Trigger: CCCCCTGGCCGATGTCAGCAATGACCTGGGCCACAG...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGAAGCCCTCTGCCCCCTaGGCTCTGAGCAGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGKPSAP*ALSSCL
Trigger: CAGACAGCTGCTCAGAGCCAAGGGGGCAGAGGGCTT...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCATGGAACACCGACACCTaGCTGCCGTCGCTAACCCGC +
Preference number: 5 (lower is better)
Translates to: GHRKEKSDAAAAESQLGAWNTDT*LPSLTR
Trigger: GCGGGTTAGCGACGGCAGCAAGGTGTCGGTGTTCCA...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp AGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCTTCTTGGACTTCTTCTaGGGCTTGCTGCGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: SLTPLRPSLNLEHRNTVAFLDFF*GLLREG
Trigger: CCCCTCGCGCAGCAAGCCCAAGAAGAAGTCCAAGAA...GGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGTCGGCGATGAGCCTCTaGATGTGGGCCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PHALRTQLHLSTTSVILQSAMSL*MWASLL
Trigger: CAGCAAGCTGGCCCACATCAAGAGGCTCATCGCCGA...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGGGCCACCCTGTTTGCTaGCTGGAGCAGAGACCCTGC +
Preference number: 5 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQGHPVC*LEQRPC
Trigger: GCAGGGTCTCTGCTCCAGCAAGCAAACAGGGTGGCC...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGAAGCCCTCTGCCCCCTaGGCTCTGAGCAGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQKPSAP*ALSSCL
Trigger: CAGACAGCTGCTCAGAGCCAAGGGGGCAGAGGGCTT...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCTCAACTGACAGCCCCTaGGACTGGTTCCCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGSTDSP*DWFPGQ
Trigger: CTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGA...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp TGTCCTGTATGCTGCCCAGGCAGTCCAGGTGAACTTCCCCATGACTGGAGACATTTCAGCGCCGCCATCTaGCGACCATCTCTCCCCCGC +
Preference number: 5 (lower is better)
Translates to: CPVCCPGSPGELPHDWRHFSAAI*RPSLPR
Trigger: GCGGGGGAGAGATGGTCGCAAGATGGCGGCGCTGAA...ATGTCTCCAGTCATGGGGAAGTTCACCTGGACTGCCTGGGCAGCATACAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS GCA 90 bp GCCTTGCATGGTGGCAGACAGGGCCCAAACACTGCCATGAGCTGCTaGTGTACCCAGCGAGCAAGGACAGACCTGAGACTATACCAGTCC +
Preference number: 5 (lower is better)
Translates to: ALHGGRQGPNTAMSC*CTQRARTDLRLYQS
Trigger: GGACTGGTATAGTCTCAGGTCTGTCCTTGCTCGCTGGGTACAGCAGCAGCTCATGGCAGTGTTTGGGCCCTGTCTGCCACCATGCAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596915.1
CDS-3UTR CAA 90 bp AAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCGCACACACCGTGATCTaGTCCTGTATGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: KSDAAAAESQLGAQKHSGAHTVI*SCMLPR
Trigger: CCTGGGCAGCATACAGGACAAGATCACGGTGTGTGC...GCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTATGGCACTCGCCAAGTaGATGGGGGTTGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESMALAK*MGVARF
Trigger: GAAGCGGGCAACCCCCATCAACTTGGCGAGTGCCAT...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGGCAACAGAGCAGCAATaGGGGTGTCTGCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGATEQQ*GCLQSL
Trigger: CAGGCTCTGCAGACACCCCAATTGCTGCTCTGTTGC...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp AGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCTCCACAGTCAGCTCTTaGGAAGCTGTCAGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: SLTPLRPSLNLEHRNTVASTVSS*EAVRRH
Trigger: GTGCCTCCTGACAGCTTCCAAAGAGCTGACTGTGGA...GGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTATGGCACTCGCCAAGTaGATGGGGGTTGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLMALAK*MGVARF
Trigger: GAAGCGGGCAACCCCCATCAACTTGGCGAGTGCCAT...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp GTCGCAGCAGCAGCTCAGCCTTGCGGTAGGGCCGTAGTGCCAGGAGGTGCAGCATTGTCTTTGTGCTTCTaGGACTTCTTCTTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: VAAAAQPCGRAVVPGGAALSLCF*DFFLGL
Trigger: CAAGCCCAAGAAGAAGTCCAAGAAGCACAAAGACAA...TGCTGCACCTCCTGGCACTACGGCCCTACCGCAAGGCTGAGCTGCTGCTGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CAA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCATTGATGTGGGCCAGCTaGCTGTGCAGGTACTCGCAG +
Preference number: 5 (lower is better)
Translates to: GHRKEKSDAAAAESQLGALMWAS*LCRYSQ
Trigger: CTGCGAGTACCTGCACAGCAAGCTGGCCCACATCAA...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTTCGGCGATGAGCCTCTaGATGTGGGCCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLSAMSL*MWASLL
Trigger: CAGCAAGCTGGCCCACATCAAGAGGCTCATCGCCGA...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp ATATTCCTGCAAAATCTGCCCTCGAGTAGTCTCATACTCCTCGGAGCCCTGGGACTCTCTCACCGCCTTTaGCTCCCCCGACCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: IFLQNLPSSSLILLGALGLSHRL*LPRPSQ
Trigger: CTGGGAGGGTCGGGGGAGCAAAAGGCGGTGAGAGAG...TCCCAGGGCTCCGAGGAGTATGAGACTACTCGAGGGCAGATTTTGCAGGAATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CAA 90 bp GCTTCATTCAGCCCTAAATGGGAACACACGCCTCAGACCCCACCATGCCCTGGGCGGCCGAGTCTCAACTaGGAGCACAGAAACACAGTG +
Preference number: 5 (lower is better)
Translates to: ASFSPKWEHTPQTPPCPGRPSLN*EHRNTV
Trigger: CACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCG...CCCAGGGCATGGTGGGGTCTGAGGCGTGTGTTCCCATTTAGGGCTGAATGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTTCCTTAGCACTCATGTaGGCCACCTGCTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLSLALM*ATCWRR
Trigger: CCTCCTCCAGCAGGTGGCCAACATGAGTGCTAAGGA...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp AGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCTCCTTCTGCACATCCTaGTACATGCAGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SLTPLRPSLNLEHRNTVASFCTS*YMQSCS
Trigger: ACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGA...GGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTGATATCCGGGGTTTCTaGTTGGCTAGGGGGTCGATG +
Preference number: 5 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESDIRGF*LARGSM
Trigger: CATCGACCCCCTAGCCAACAAGAAACCCCGGATATC...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTTTCTTGGACTTCTTCTaGGGCTTGCTGCGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLFLDFF*GLLREG
Trigger: CCCCTCGCGCAGCAAGCCCAAGAAGAAGTCCAAGAA...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp CGTTCTTGTAGCTCTGGCGCTGCTCCGAAGAGGAGATGGCTGCGTACTTCAGCATCAGCCGCCCTCTCCTaGTCTTTGTGCTTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: RSCSSGAAPKRRWLRTSASAALS*SLCFLD
Trigger: GTCCAAGAAGCACAAAGACAAGGAGAGGGCGGCTGA...TGCTGAAGTACGCAGCCATCTCCTCTTCGGAGCAGCGCCAGAGCTACAAGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CAA 90 bp CCCCACGCCCTCAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGAGAGCTCTCAGGCCCTaGGCTTCCTTGAAATCGGAT +
Preference number: 5 (lower is better)
Translates to: PHALRTQLHLSTTSVILQRALRP*ASLKSD
Trigger: ATCCGATTTCAAGGAAGCCAAGGGCCTGAGAGCTCT...CTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTGAGGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CAA 90 bp ATGGGAAACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTGTGCCCTTGGCTTCCTaGAAATCGGATAGATGGCCT +
Preference number: 5 (lower is better)
Translates to: MGNRGHRKEKSDAAAAESVPLAS*KSDRWP
Trigger: AGGCCATCTATCCGATTTCAAGGAAGCCAAGGGCAC...AGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTTTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262809.9
CDS-3UTR CAA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTTCAGCCGCCCTCTCCTaGTCTTTGTGCTTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLSAALS*SLCFLD
Trigger: GTCCAAGAAGCACAAAGACAAGGAGAGGGCGGCTGA...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp CCAGTCCTTCTGCACATCCTTGTACATGCAGTCCTGCAGTGTACACGTGCCGTCCGGCCGAGTCTCAACTaGGAGCACAGAAACACAGTG +
Preference number: 5 (lower is better)
Translates to: PVLLHILVHAVLQCTRAVRPSLN*EHRNTV
Trigger: CACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCG...GACGGCACGTGTACACTGCAGGACTGCATGTACAAGGATGTGCAGAAGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS-3UTR CAA 90 bp CAGAACGCAGCTGCACCTTTCGACGACCTCTGTAATACTGCAGGCAGGACCCAGGATGGAGATGTGCCCTaGGCTTCCTTGAAATCGGAT +
Preference number: 5 (lower is better)
Translates to: QNAAAPFDDLCNTAGRTQDGDVP*ASLKSD
Trigger: ATCCGATTTCAAGGAAGCCAAGGGCACATCTCCATC...CTGGGTCCTGCCTGCAGTATTACAGAGGTCGTCGAAAGGTGCAGCTGCGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262809.9
CDS-3UTR CAA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGGCACACACCGTGATCTaGTCCTGTATGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRAHTVI*SCMLPR
Trigger: CCTGGGCAGCATACAGGACAAGATCACGGTGTGTGC...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGTCCTTAGCACTCATGTaGGCCACCTGCTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRSLALM*ATCWRR
Trigger: CCTCCTCCAGCAGGTGGCCAACATGAGTGCTAAGGA...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp AACCGAGGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTATCCGGGGTTTCTTGTaGGCTAGGGGGTCGATGAAA +
Preference number: 5 (lower is better)
Translates to: NRGHRKEKSDAAAAESQLIRGFL*ARGSMK
Trigger: TTTCATCGACCCCCTAGCCAACAAGAAACCCCGGAT...AAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCCTCGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp GGACATCGCAAAGAAAAGTCTGACGCCGCTGCGGCCGAGTCTCAACTTGGAGCATTGTCTTTGTGCTTCTaGGACTTCTTCTTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GHRKEKSDAAAAESQLGALSLCF*DFFLGL
Trigger: CAAGCCCAAGAAGAAGTCCAAGAAGCACAAAGACAA...TGCTCCAAGTTGAGACTCGGCCGCAGCGGCGTCAGACTTTTCTTTGCGATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp TGCGGCCGAGTCTCAACTTGGAGCACAGAAACACAGTGGCCCCCGACAGCTGAGTTGGTGTTGGTCTTTTaGATTTTTCGATATTCCTGC +
Preference number: 5 (lower is better)
Translates to: CGRVSTWSTETQWPPTAELVLVF*IFRYSC
Trigger: GCAGGAATATCGAAAAATCAAAAAGACCAACACCAA...CTCAGCTGTCGGGGGCCACTGTGTTTCTGTGCTCCAAGTTGAGACTCGGCCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS-3UTR CAA 90 bp AACAAAAAGGCAAATTCAACTGACAGCCCCTTGGACTGGTTCCCAGGGCAGAGGTTGGTGTTGGTCTTTTaGATTTTTCGATATTCCTGC +
Preference number: 5 (lower is better)
Translates to: NKKANSTDSPLDWFPGQRLVLVF*IFRYSC
Trigger: GCAGGAATATCGAAAAATCAAAAAGACCAACACCAA...CCTCTGCCCTGGGAACCAGTCCAAGGGGCTGTCAGTTGAATTTGCCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262809.9
ENST00000594635.6
CDS GCA 72 bp CAGACTCTGGGGCCACCAAGCTCGTGGTGGCGATGGTaGGCGCCCAAGTGGGCCCTGGCTCCCGCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: QTLGPPSSWWRW*APKWALAPARA
Trigger: GGCTCTGGCGGGAGCCAGGGCCCACTTGGGCGCGCACCATCGCCACCACGAGCTTGGTGGCCCCAGAGTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608165.1
CDS CCA 72 bp GGCCAGACTCTGGGGCCACCAAGCTCGTGGTGGCGATaGTGCGCGCCCAAGTGGGCCCTGGCTCCCGCCAGA +
Preference number: 6 (lower is better)
Translates to: GQTLGPPSSWWR*CAPKWALAPAR
Trigger: TCTGGCGGGAGCCAGGGCCCACTTGGGCGCGCACCATCGCCACCACGAGCTTGGTGGCCCCAGAGTCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608165.1
CDS CCA 72 bp GGGAAGGGCCAGACTCTGGGGCCACCAAGCTCGTGGTaGCGATGGTGCGCGCCCAAGTGGGCCCTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: GKGQTLGPPSSW*RWCAPKWALAP
Trigger: GGGAGCCAGGGCCCACTTGGGCGCGCACCATCGCCACCACGAGCTTGGTGGCCCCAGAGTCTGGCCCTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608165.1
CDS CCA 72 bp CTGGGGAAGGGCCAGACTCTGGGGCCACCAAGCTCGTaGTGGCGATGGTGCGCGCCCAAGTGGGCCCTGGCT +
Preference number: 6 (lower is better)
Translates to: LGKGQTLGPPSS*WRWCAPKWALA
Trigger: AGCCAGGGCCCACTTGGGCGCGCACCATCGCCACCACGAGCTTGGTGGCCCCAGAGTCTGGCCCTTCCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608165.1
CDS GCA 72 bp GCCCGTAGCTCCTATCCTCCTTCAGCGCCGCCATCTTaGGACCATCTCTCCCCCGCGCCCCCTTCCCGGCTC +
Preference number: 6 (lower is better)
Translates to: ARSSYPPSAPPS*DHLSPAPPSRL
Trigger: GAGCCGGGAAGGGGGCGCGGGGGAGAGATGGTCGCAAGATGGCGGCGCTGAAGGAGGATAGGAGCTACGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS GCA 72 bp GAGGAGAGCCGCCCATTGCCCAAGCAGCCTGTGACGTaGACCCGACACGTCCTGGTGTGGCCCCAGCCAAGG +
Preference number: 6 (lower is better)
Translates to: EESRPLPKQPVT*TRHVLVWPQPR
Trigger: CCTTGGCTGGGGCCACACCAGGACGTGTCGGGTGCACGTCACAGGCTGCTTGGGCAATGGGCGGCTCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596915.1
CDS CCA 72 bp TGCTGCATGGAGTGCACCAGGGGGAGAAGCGCTGCCTaGGGAAGGGCCAGACTCTGGGGCCACCAAGCTCGT +
Preference number: 6 (lower is better)
Translates to: CCMECTRGRSAA*GRARLWGHQAR
Trigger: ACGAGCTTGGTGGCCCCAGAGTCTGGCCCTTCCCCAGGCAGCGCTTCTCCCCCTGGTGCACTCCATGCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608165.1
CDS CAA 72 bp GCACTGTCGGTGAGCTTCACGTGGAACACCGACACCTaGCTGCCGTCGCTAACCCGCCCGCACGACAGCCCG +
Preference number: 6 (lower is better)
Translates to: ALSVSFTWNTDT*LPSLTRPHDSP
Trigger: CGGGCTGTCGTGCGGGCGGGTTAGCGACGGCAGCAAGGTGTCGGTGTTCCACGTGAAGCTCACCGACAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262809.9
ENST00000594635.6
ENST00000596915.1
CDS TCA 72 bp CGCGGTAGCTCTCGAAGGCCCTCAGGGCACTGTCGGTaGGCTTCACGTGGAACACCGACACCTTGCTGCCGT +
Preference number: 6 (lower is better)
Translates to: RGSSRRPSGHCR*ASRGTPTPCCR
Trigger: ACGGCAGCAAGGTGTCGGTGTTCCACGTGAAGCTCACCGACAGTGCCCTGAGGGCCTTCGAGAGCTACCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262809.9
ENST00000594635.6
ENST00000596915.1
CDS CCA 72 bp TCGAAGGCCCTCAGGGCACTGTCGGTGAGCTTCACGTaGAACACCGACACCTTGCTGCCGTCGCTAACCCGC +
Preference number: 6 (lower is better)
Translates to: SKALRALSVSFT*NTDTLLPSLTR
Trigger: GCGGGTTAGCGACGGCAGCAAGGTGTCGGTGTTCCACGTGAAGCTCACCGACAGTGCCCTGAGGGCCTTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262809.9
ENST00000594635.6
ENST00000596915.1
CDS GCA 72 bp CCCAGCCTTGCATGGTGGCAGACAGGGCCCAAACACTaGCATGAGCTGCTGCTGTACCCAGCGAGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: PSLAWWQTGPKH*HELLLYPASKD
Trigger: GTCCTTGCTCGCTGGGTACAGCAGCAGCTCATGGCAGTGTTTGGGCCCTGTCTGCCACCATGCAAGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596915.1
CDS GCA 72 bp GTTGGGGGCCCCTGCCCTATCAGAGTGGAAGCTAGGTaGACATCGCTGCATGAAGGGAGCCACTGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: VGGPCPIRVEAR*TSLHEGSHWER
Trigger: CCTCTCCCAGTGGCTCCCTTCATGCAGCGATGTGCACCTAGCTTCCACTCTGATAGGGCAGGGGCCCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596915.1
CDS CCA 72 bp AAGGAGAACGTCCGCGCCTCTGCGGGGCAGTCAGGCTaGGGGATGGAGATGTGCTGGAAGCCCATGGATCAT +
Preference number: 6 (lower is better)
Translates to: KENVRASAGQSG*GMEMCWKPMDH
Trigger: ATGATCCATGGGCTTCCAGCACATCTCCATCCCCCAGCCTGACTGCCCCGCAGAGGCGCGGACGTTCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS CCA 72 bp AGGGGCTATCCTGGGGGCCTAGAACCCAGCCTTGCATaGTGGCAGACAGGGCCCAAACACTGCCATGAGCTG +
Preference number: 6 (lower is better)
Translates to: RGYPGGLEPSLA*WQTGPKHCHEL
Trigger: CAGCTCATGGCAGTGTTTGGGCCCTGTCTGCCACCATGCAAGGCTGGGTTCTAGGCCCCCAGGATAGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596915.1
CDS TCA 72 bp CCTTGCATGGTGGCAGACAGGGCCCAAACACTGCCATaGGCTGCTGCTGTACCCAGCGAGCAAGGACAGACC +
Preference number: 6 (lower is better)
Translates to: PCMVADRAQTLP*AAAVPSEQGQT
Trigger: GGTCTGTCCTTGCTCGCTGGGTACAGCAGCAGCTCATGGCAGTGTTTGGGCCCTGTCTGCCACCATGCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596915.1
CDS CCA 72 bp TCGTGCTCACTCACCCACAGCTCACCTCCTGCTGTGTaGGCAGTTCCTAACCAGTCCAGTGCTGGGGGTTGG +
Preference number: 6 (lower is better)
Translates to: SCSLTHSSPPAV*AVPNQSSAGGW
Trigger: CCAACCCCCAGCACTGGACTGGTTAGGAACTGCCCACACAGCAGGAGGTGAGCTGTGGGTGAGTGAGCACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596915.1
CDS CAA 72 bp CCTTCCCAACTGCCCTTGAGCTCACAGGGGCCGTCTTaGTTGACTCAGGGCACAGGAGCAACATTCTCTGAC +
Preference number: 6 (lower is better)
Translates to: PSQLPLSSQGPS*LTQGTGATFSD
Trigger: GTCAGAGAATGTTGCTCCTGTGCCCTGAGTCAACAAAGACGGCCCCTGTGAGCTCAAGGGCAGTTGGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596124.3
CDS CAA 90 bp GATGGGACGTTTTACAGGATGTTCGCTACACCTTCCCAACTGCCCTaGAGCTCACAGGGGCCGTCTTTGTTGACTCAGGGCACAGGAGCA +
Preference number: 6 (lower is better)
Translates to: DGTFYRMFATPSQLP*SSQGPSLLTQGTGA
Trigger: TGCTCCTGTGCCCTGAGTCAACAAAGACGGCCCCTGTGAGCTCAAGGGCAGTTGGGAAGGTGTAGCGAACATCCTGTAAAACGTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596124.3
CDS CAA 72 bp TTTTACAGGATGTTCGCTACACCTTCCCAACTGCCCTaGAGCTCACAGGGGCCGTCTTTGTTGACTCAGGGC +
Preference number: 6 (lower is better)
Translates to: FYRMFATPSQLP*SSQGPSLLTQG
Trigger: GCCCTGAGTCAACAAAGACGGCCCCTGTGAGCTCAAGGGCAGTTGGGAAGGTGTAGCGAACATCCTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596124.3
CDS GCA 72 bp CATGGATCATCATGTCCATATCCCCACATCCAGCTGTaGAGAGCTCTCAGGCCCTTGGCTTCCTTGAAATCG +
Preference number: 6 (lower is better)
Translates to: HGSSCPYPHIQL*RALRPLASLKS
Trigger: CGATTTCAAGGAAGCCAAGGGCCTGAGAGCTCTGCACAGCTGGATGTGGGGATATGGACATGATGATCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594635.6
CDS TCA 72 bp AGACCTGAGACTATACCAGTCCCAAGATTCCAAATATaGATGATTAAGACAAAAACTTACCCCTTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: RPETIPVPRFQI*MIKTKTYPLAS
Trigger: GGAAGCCAAGGGGTAAGTTTTTGTCTTAATCATTCATATTTGGAATCTTGGGACTGGTATAGTCTCAGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596915.1