RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELFN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000225968

Ensembl transcript IDs: ENST00000424383.4, ENST00000561626.3

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACCCTGAGTCCAGCAGGGCTCCAGGACCTGTCCCGGAGGCCACTTaGCCGCCGGCATTCACTCTGCCCCTCTGCAGTGGACTCCGGAGG +
Preference number: 1 (lower is better)
Translates to: HPESSRAPGPVPEAT*PPAFTLPLCSGLRR
Trigger: CCTCCGGAGTCCACTGCAGAGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCCCTGCTGGACTCAGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR GCA 90 bp CTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTaGCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGAC +
Preference number: 1 (lower is better)
Translates to: LQDLSRRPLGRRHSL*PSAVDSGGGNEETD
Trigger: GTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR GCA 90 bp TCCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTaGCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGC +
Preference number: 1 (lower is better)
Translates to: SLVCVCVCVCVCVDT*HPGRQAHPRTGHRS
Trigger: GCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACACACACACGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR CCA 90 bp CCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTCTGCAGTaGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATC +
Preference number: 1 (lower is better)
Translates to: PGGHLAAGIHSAPLQ*TPEAAMKRRTGQRI
Trigger: GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR CCA 90 bp TTCCGAAGTCCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCC +
Preference number: 1 (lower is better)
Translates to: FRSPSCVCVCVCVCV*TRATRGDKRIPGPA
Trigger: GGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACACACACACGAGGGACTTCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR TCA 90 bp CCGGCATTCACTCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATaGAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCG +
Preference number: 1 (lower is better)
Translates to: PAFTLPLCSGLRRRQ*RDGLDRESTENHGP
Trigger: CGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGAGTGAATGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR CCA 90 bp AGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGTCTCTaGGTGGATCCTGCATCCTTTTTGGTCCAGTGGGCATCGCCGGTC +
Preference number: 1 (lower is better)
Translates to: SCCGGVRVLGLVLSL*VDPASFLVQWASPV
Trigger: GACCGGCGATGCCCACTGGACCAAAAAGGATGCAGGATCCACCCAGAGACTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR CCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTaGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTG +
Preference number: 1 (lower is better)
Translates to: CPSAVDSGGGNEETD*TENPQKTTDRGDHV
Trigger: CACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR TCA 90 bp GCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTaGGTCTCTGGGTGGATCCTGCATCCTTTTTGGTCCAGTGGGCAT +
Preference number: 1 (lower is better)
Translates to: AVTVAVVACVCWVWC*VSGWILHPFWSSGH
Trigger: ATGCCCACTGGACCAAAAAGGATGCAGGATCCACCCAGAGACTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR GCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCCCCCGCTGTCACAGTTaGTGTGGTGGCGTGCGTGTG +
Preference number: 2 (lower is better)
Translates to: GHVPPGATSASQDRPQELPRCHS*CGGVRV
Trigger: CACACGCACGCCACCACAGCAACTGTGACAGCGGGG...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR TCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACTGTTGGGTTTGGTGCTaGGTCTCTGGGTGGATCCTG +
Preference number: 2 (lower is better)
Translates to: RATRGDKRIPGPATGARDCWVWC*VSGWIL
Trigger: CAGGATCCACCCAGAGACTCAGCACCAAACCCAACA...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR GCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGTCTCTGGGTGGATCCTaGATCCTTTTTGGTCCAGTG +
Preference number: 2 (lower is better)
Translates to: VPPGATSASQDRPQELGTSLGGS*ILFGPV
Trigger: CACTGGACCAAAAAGGATGCAGGATCCACCCAGAGA...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCATCCTGCATCCTTTTTaGTCCAGTGGGCATCGCCGG +
Preference number: 2 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPILHPF*SSGHRR
Trigger: CCGGCGATGCCCACTGGACCAAAAAGGATGCAGGAT...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACTTGGTGCTGAGTCTCTaGGTGGATCCTGCATCCTTT +
Preference number: 2 (lower is better)
Translates to: RATRGDKRIPGPATGARDLVLSL*VDPASF
Trigger: AAAGGATGCAGGATCCACCCAGAGACTCAGCACCAA...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR GCA 90 bp CCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATCGTGTGTGTGGACACGTaGCACCCGGGGCGACAAGCG +
Preference number: 2 (lower is better)
Translates to: PLQWTPEAAMKRRTGQRIVCVDT*HPGRQA
Trigger: CGCTTGTCGCCCCGGGTGGCACGTGTCCACACACAC...GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCGTTGCTGTGGTGGCGTaGGTGTGTTGGGTTTGGTGC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRVAVVA*VCWVWC
Trigger: GCACCAAACCCAACACACGCACGCCACCACAGCAAC...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGTCCTTTTTGGTCCAGTaGGCATCGCCGGTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: PPLSQLLWWRACVGFGAESFLVQ*ASPVLG
Trigger: CCCCAAGACCGGCGATGCCCACTGGACCAAAAAGGA...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCTCCTTTTTGGTCCAGTaGGCATCGCCGGTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRSFLVQ*ASPVLG
Trigger: CCCCAAGACCGGCGATGCCCACTGGACCAAAAAGGA...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGATCCTGCATCCTTTTTaGTCCAGTGGGCATCGCCGG +
Preference number: 2 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEILHPF*SSGHRR
Trigger: CCGGCGATGCCCACTGGACCAAAAAGGATGCAGGAT...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR GCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGACCCCGCTGTCACAGTTaGTGTGGTGGCGTGCGTGTG +
Preference number: 2 (lower is better)
Translates to: GGNEETDWTENPQKTTDRPRCHS*CGGVRV
Trigger: CACACGCACGCCACCACAGCAACTGTGACAGCGGGG...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGTCACAGTTGCTGTGGTaGCGTGCGTGTGTTGGGTTT +
Preference number: 2 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQSQLLW*RACVGF
Trigger: AAACCCAACACACGCACGCCACCACAGCAACTGTGA...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGTGTGTGTGTGTGTaGACACGTGCCACCCGGGGC +
Preference number: 2 (lower is better)
Translates to: EETDWTENPQKTTDRGDHVCVCV*TRATRG
Trigger: GCCCCGGGTGGCACGTGTCCACACACACACACACAC...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACCTGTCACAGTTGCTGTaGTGGCGTGCGTGTGTTGGG +
Preference number: 2 (lower is better)
Translates to: EETDWTENPQKTTDRGDHLSQLL*WRACVG
Trigger: CCCAACACACGCACGCCACCACAGCAACTGTGACAG...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR TCA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGTTGGGTTTGGTGCTaGGTCTCTGGGTGGATCCTG +
Preference number: 2 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITCWVWC*VSGWIL
Trigger: CAGGATCCACCCAGAGACTCAGCACCAAACCCAACA...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR GCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCTCTCTGGGTGGATCCTaGATCCTTTTTGGTCCAGTG +
Preference number: 2 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGSLGGS*ILFGPV
Trigger: CACTGGACCAAAAAGGATGCAGGATCCACCCAGAGA...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CAA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCCCCCCGCTGTCACAGTaGCTGTGGTGGCGTGCGTGT +
Preference number: 3 (lower is better)
Translates to: GHVPPGATSASQDRPQELPPLSQ*LWWRAC
Trigger: ACACGCACGCCACCACAGCAACTGTGACAGCGGGGG...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CAA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGGATCCTGCATCCTTTTaGGTCCAGTGGGCATCGCCG +
Preference number: 3 (lower is better)
Translates to: VPPGATSASQDRPQELGTDPASF*VQWASP
Trigger: CGGCGATGCCCACTGGACCAAAAAGGATGCAGGATC...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR CCA 72 bp TCCAGCAGGGCTCCAGGACCTGTCCCGGAGGCCACTTaGCCGCCGGCATTCACTCTGCCCCTCTGCAGTGGA +
Preference number: 3 (lower is better)
Translates to: SSRAPGPVPEAT*PPAFTLPLCSG
Trigger: TCCACTGCAGAGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCCCTGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR GCA 72 bp CTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTaGCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAA +
Preference number: 3 (lower is better)
Translates to: LSRRPLGRRHSL*PSAVDSGGGNE
Trigger: TTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CAA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGCGGGACGTGTCCCCCTaGTCTGTCCCCACTCGCTCC +
Preference number: 3 (lower is better)
Translates to: CPSAVDSGGGNEETDWTERDVSP*SVPTRS
Trigger: GGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCG...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR GCA 72 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTaGCACCCGGGGCGACAAGCGCATCCCAGGACCGGC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCVDT*HPGRQAHPRTG
Trigger: GCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR CCA 72 bp CACTTGGCCGCCGGCATTCACTCTGCCCCTCTGCAGTaGACTCCGGAGGCGGCAATGAAGAGACGGACTGGA +
Preference number: 3 (lower is better)
Translates to: HLAAGIHSAPLQ*TPEAAMKRRTG
Trigger: TCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGAGTGAATGCCGGCGGCCAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR CCA 72 bp ACAATAGAACGACTACAGTGTACATGGGGGCTGGGCTaGGGGACGTGCCTCCCAGCCCTTGGCCGTCCTGGC +
Preference number: 3 (lower is better)
Translates to: TIERLQCTWGLG*GTCLPALGRPG
Trigger: GCCAGGACGGCCAAGGGCTGGGAGGCACGTCCCCCAGCCCAGCCCCCATGTACACTGTAGTCGTTCTATTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CAA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCCGGGACGTGTCCCCCTaGTCTGTCCCCACTCGCTCC +
Preference number: 3 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGRDVSP*SVPTRS
Trigger: GGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCG...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR CCA 72 bp CCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGACACGTGCCACCCGGGGCGACAAGCGCATCCCA +
Preference number: 3 (lower is better)
Translates to: PSCVCVCVCVCV*TRATRGDKRIP
Trigger: TGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACACACACACGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCGTGCGTGTGTTGGGTTaGGTGCTGAGTCTCTGGGTG +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRVRVLG*VLSLWV
Trigger: CACCCAGAGACTCAGCACCAAACCCAACACACGCAC...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CAA 90 bp CCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATCGATCCTGCATCCTTTTaGGTCCAGTGGGCATCGCCG +
Preference number: 3 (lower is better)
Translates to: PLQWTPEAAMKRRTGQRIDPASF*VQWASP
Trigger: CGGCGATGCCCACTGGACCAAAAAGGATGCAGGATC...GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR-3UTR CAA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCGTGCGTGTGTTGGGTTaGGTGCTGAGTCTCTGGGTG +
Preference number: 3 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGVRVLG*VLSLWV
Trigger: CACCCAGAGACTCAGCACCAAACCCAACACACGCAC...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR CCA 72 bp GGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGTCTCTaGGTGGATCCTGCATCCTTTTTGGTCCAGTGGGCA +
Preference number: 3 (lower is better)
Translates to: GGVRVLGLVLSL*VDPASFLVQWA
Trigger: TGCCCACTGGACCAAAAAGGATGCAGGATCCACCCAGAGACTCAGCACCAAACCCAACACACGCACGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR CCA 72 bp GCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTaGACAGAGAATCCACAGAAAACCACGGACCGAGGA +
Preference number: 3 (lower is better)
Translates to: AVDSGGGNEETD*TENPQKTTDRG
Trigger: TCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR TCA 72 bp ACTCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATaGAGAGACGGACTGGACAGAGAATCCACAGAAAAC +
Preference number: 3 (lower is better)
Translates to: TLPLCSGLRRRQ*RDGLDRESTEN
Trigger: GTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR GCA 72 bp TGTGTTGGGTTTGGTGCTGAGTCTCTGGGTGGATCCTaGATCCTTTTTGGTCCAGTGGGCATCGCCGGTCTT +
Preference number: 3 (lower is better)
Translates to: CVGFGAESLGGS*ILFGPVGIAGL
Trigger: AAGACCGGCGATGCCCACTGGACCAAAAAGGATGCAGGATCCACCCAGAGACTCAGCACCAAACCCAACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCCCGCGGGTGTCACAGTaGGGATGGCGTCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELPRVSQ*GWRRPR
Trigger: CCGCGGCCGACGCCATCCTCACTGTGACACCCGCGG...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCAGCCGCTGGACGAGGTaGTGGCACGAGGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELSRWTR*WHEGAR
Trigger: CCGGGCCCCCTCGTGCCAGCACCTCGTCCAGCGGCT...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGCCCGGATGCTGGACGTaGGGGCCCGACCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTPGCWT*GPDHLS
Trigger: GCTGAGGTGGTCGGGCCCCCACGTCCAGCATCCGGG...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGGGCCACCAGTGGCGTaGTGCCGTCCCCGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDGPPVA*CRPRRS
Trigger: GCTTCTCCGGGGACGGCACCACGCCACTGGTGGCCC...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCCCGGACCAGGCGGGCTaGGCAGCCGGGGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELPDQAG*AAGASR
Trigger: TCTGCTTGCCCCGGCTGCCCAGCCCGCCTGGTCCGG...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCCCGCGGGTGTCACAGTaGGGATGGCGTCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPPRVSQ*GWRRPR
Trigger: CCGCGGCCGACGCCATCCTCACTGTGACACCCGCGG...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGAGCCTCCACCCACCCTaGGTCCAGCAGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTSLHPP*VQQGSR
Trigger: CCTGGAGCCCTGCTGGACTCAGGGTGGGTGGAGGCT...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGGGCGGGAGGGGGAGGTaGCTGCACTCTCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTGGRGR*LHSQGC
Trigger: ACACCCCTGAGAGTGCAGGCACCTCCCCCTCCCGCC...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGATCAGCCAGCAGTCTaGGCGGGCCAGGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELDQPAV*AGQAAS
Trigger: GCTGGCGGCCTGGCCCGCGCAGACTGCTGGCTGATC...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGGCTGCCAGCTGCGGCTaGCGAGGCGGCCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTAASCG*RGGLLV
Trigger: CACAAGAAGGCCGCCTCGGCAGCCGCAGCTGGCAGC...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACACGCTGTGGTGCCGCTaGAGGCTGTGGCCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDTLWCR*RLWPKA
Trigger: CGCCTTCGGCCACAGCCTGCAGCGGCACCACAGCGT...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGGAGCCGGGGTACGAGTaGCGGTGCTCGCCGTACTGG +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTEPGYE*RCSPYW
Trigger: CCAGTACGGCGAGCACCGGCACTCGTACCCCGGCTC...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTCAGCGTGCAGCAGGGTaGCGGCCGCCACGCACACCC +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPQRAAG*RPPRTP
Trigger: GGGTGTGCGTGGCGGCCGCCACCCTGCTGCACGCTG...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACCGCACACCGACAGCTTaGCCAGGCCGGCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDRTPTA*PGRRRC
Trigger: GCACCTTCGCCGGCCTGGCCAAGCTGTCGGTGTGCG...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTTCGGCCACCGAACTCTaGCTGTCGGGGCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPSATEL*LSGPGR
Trigger: CCGGCCGGGCCCCGACAGCCAGAGTTCGGTGGCCGA...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACCCAGGAAGCCGTGCTTaGCGGCCAGCGGCTCGGACA +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDPGSRA*RPAART
Trigger: TGTCCGAGCCGCTGGCCGCCAAGCACGGCTTCCTGG...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGCAGCACCTGCAGGTTaGACTGGCCCGAGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDAAPAG*TGPRRR
Trigger: GCGCCTTCTCGGGCCAGTTCAACCTGCAGGTGCTGC...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCACCGAGGAGATCACGTaGGGGGCCCCGAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELTEEIT*GAPRWP
Trigger: TGGCCACCTCGGGGCCCCTCACGTGATCTCCTCGGT...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTGCCTCCACGCTGTGGTaGCGCTGCAGGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPASTLW*RCRLWP
Trigger: CGGCCACAGCCTGCAGCGGCACCACAGCGTGGAGGC...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGTACGAGTGCCGGTaGTCGCCGTACTGGCGACCC +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELGYECR*SPYWRP
Trigger: GGGTCGCCAGTACGGCGAGCACCGGCACTCGTACCC...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGGGGCTCAGGACTTGTaGTGGGCCGACACGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDGAQDL*WADTPF
Trigger: GAAGGGCGTGTCGGCCCAGCACAAGTCCTGAGCCCC...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGCTGTCCCAAACCGCATaGCCGCGCGACGTAAGCGCG +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTLSQTA*PRDVSA
Trigger: CGCGCTTACGTCGCGCGGCCATGCGGTTTGGGACAG...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTCACAGGGCATGTCACTaGGCTCCGGCGGAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPHRACH*APAEAG
Trigger: CCCCGCCTCCGCCGGAGCCCAGTGACATGCCCTGTG...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGGGCCTTGGTCAGCCTaGACACGGTGGAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDGPWSA*TRWRPC
Trigger: GCAAGGCCTCCACCGTGTCCAGGCTGACCAAGGCCC...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGCAGCCCGGCGCTGGTaGACACCACGCAGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDAARRW*TPRSRC
Trigger: ACACCTACTGCGTGGTGTCCACCAGCGCCGGGCTGC...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACCCTTCTCGATGTACTTaGCCTCGGCGGCCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDPSRCT*PRRPRP
Trigger: AGGCCGCGGCCGCCGAGGCCAAGTACATCGAGAAGG...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTAGCCTCCACCCACCCTaGGTCCAGCAGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPSLHPP*VQQGSR
Trigger: CCTGGAGCCCTGCTGGACTCAGGGTGGGTGGAGGCT...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCAGCCCCAATTCAGCCTaGCCAGGGGGACCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELSPNSA*PGGPGG
Trigger: CCCACCTGGTCCCCCTGGGCAGGCTGAATTGGGGCT...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCCCACCAGTGGCGTGGTaGCGTCCCCGGAGAAGCACT +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELPPVAW*RPRRST
Trigger: AGTGCTTCTCCGGGGACGGCACCACGCCACTGGTGG...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTCAGGCAGGTAAGGGATaGGCGTCACGGCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPQAGKG*ASRPRG
Trigger: GCCCCGAGGCCGTGACGCGCATCCCTTACCTGCCTG...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACTCCACCAGCTTGTACTaGTCCACCTCGCCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDSTSLY*STSPAA
Trigger: TGCGGCCGGCGAGGTGGAGCAGTACAAGCTGGTGGA...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGTCCTCTTCCTCCTTGTaGCGCCGGCGGCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTSSSSL*RRRLSL
Trigger: CAGACTGAGCCGCCGGCGGCACAAGGAGGAAGAGGA...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGTTCACTCTGCCCCTCTaGAGTGGACTCCGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTFTLPL*SGLRRR
Trigger: CCGCCTCCGGAGTCCACTGCAGAGGGGCAGAGTGAA...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGCGCCGGCATTCACTCTaGCCCTCTGCAGTGGACTCC +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTRRHSL*PSAVDS
Trigger: GGAGTCCACTGCAGAGGGGCAGAGTGAATGCCGGCG...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCATGGTGAGGCAGGTGTaGTTGTGGCGCAGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELMVRQV*LWRSPA
Trigger: CGCCGGGCTGCGCCACAACCACACCTGCCTCACCAT...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCTTGTGCTTCTCCTCCTaGCGCCGCCGCCTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPLCFSS*RRRLRR
Trigger: CCTGCGCAGGCGGCGGCGCCAGGAGGAGAAGCACAA...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTTGCGCACGGAGCCGCTaGACGAGGTGCTGGCACGAG +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPCARSR*TRCWHE
Trigger: CTCGTGCCAGCACCTCGTCCAGCGGCTCCGTGCGCA...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTCCGCGGCCGGGTGAGTaGCTCCAGGATGGACGCCTT +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPPRPGE*LQDGRL
Trigger: AAGGCGTCCATCCTGGAGCCACTCACCCGGCCGCGG...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGCTCAGGACTTGTGCTaGGCCGACACGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDAQDLC*ADTPFQ
Trigger: CTGGAAGGGCGTGTCGGCCCAGCACAAGTCCTGAGC...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGGTGTGTGTGTGTGTGTaGACACGTGCCACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTVCVCV*TRATRG
Trigger: GCCCCGGGTGGCACGTGTCCACACACACACACACAC...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGTCTGCCCCTCTGCAGTaGACTCCGGAGGCGGCAATG +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTSAPLQ*TPEAAM
Trigger: CATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGGGAGCGGCCCGGCTGTaGGCGCCCGGATGCTGGACG +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEGAARL*APGCWT
Trigger: CGTCCAGCATCCGGGCGCTCACAGCCGGGCCGCTCC...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCGGAGGGGGAGGTGCCTaGACTCTCAGGGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPGGGGA*TLRGVL
Trigger: CAGGACACCCCTGAGAGTGCAGGCACCTCCCCCTCC...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCGGGCCTTGGTCAGCCTaGACACGGTGGAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPGPWSA*TRWRPC
Trigger: GCAAGGCCTCCACCGTGTCCAGGCTGACCAAGGCCC...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACAGACGGATCTCCTCCTaGGCCTTGGTCAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDRRISS*ALVSLD
Trigger: GTCCAGGCTGACCAAGGCCCAGGAGGAGATCCGTCT...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCGCAGCCCGGCGCTGGTaGACACCACGCAGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPAARRW*TPRSRC
Trigger: ACACCTACTGCGTGGTGTCCACCAGCGCCGGGCTGC...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCTGCCCTTGCTGGCCTTaGGGGTGTCCGCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPCPCWP*GCPRSP
Trigger: TGGAGAGCGCGGACACCCCCAAGGCCAGCAAGGGCA...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCCCCGACTTGACGCCCTaGAAGGAGGTGGACTCGGAC +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELPDLTP*KEVDSD
Trigger: GTCCGAGTCCACCTCCTTCCAGGGCGTCAAGTCGGG...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCTGCCGCTGCAGGCTGTaGCCGAAGGCGTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELCRCRL*PKASLY
Trigger: GTACAAGGACGCCTTCGGCCACAGCCTGCAGCGGCA...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTCGCTCCCAGATGCTCTaGGAGGCCCGGCAGGTGTAC +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPRSQML*EARQVY
Trigger: GTACACCTGCCGGGCCTCCCAGAGCATCTGGGAGCG...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCAGTGTACATGGGGGCTaGGCTGGGGGACGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPSVHGG*AGGRAS
Trigger: GGAGGCACGTCCCCCAGCCCAGCCCCCATGTACACT...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCCTGACTGCAGTTTGCTaGGGATGCTGCGGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPLTAVC*GCCGGR
Trigger: GCGGCCACCGCAGCATCCTCAGCAAACTGCAGTCAG...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATGGAGCGGCCCGGCTGTaGGCGCCCGGATGCTGGACG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHGAARL*APGCWT
Trigger: CGTCCAGCATCCGGGCGCTCACAGCCGGGCCGCTCC...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACAGGTGGACTCGGACTTaGGCGCGTCGATGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDRWTRT*ARRCSC
Trigger: ACAACTGCATCGACGCGCTCAAGTCCGAGTCCACCT...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTCCCAGCTGCAGCACCTaGAGGTTGAACTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPPSCST*RLNWPE
Trigger: CTCGGGCCAGTTCAACCTGCAGGTGCTGCAGCTGGG...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGTGCCGCTGTTGAGCTaGTGGATGCGGTTCATGGAC +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDVPLLS*WMRFMD
Trigger: GTCCATGAACCGCATCCAGCAGCTCAACAGCGGCAC...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGCCGCTGGACGAGGTaGTGGCACGAGGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQSRWTR*WHEGAR
Trigger: CCGGGCCCCCTCGTGCCAGCACCTCGTCCAGCGGCT...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTCGAACTGAACCTTCTTaGGCAGGGCATGGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPRTEPS*AGHGPR
Trigger: CCGCGGGCCATGCCCTGCGCAAGAAGGTTCAGTTCG...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCTTCACTCTGCCCCTCTaGAGTGGACTCCGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPFTLPL*SGLRRR
Trigger: CCGCCTCCGGAGTCCACTGCAGAGGGGCAGAGTGAA...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCGGGCAGGGCCACCAGTaGCGTGGTGCCGTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRGQGHQ*RGAVPG
Trigger: TCCGGGGACGGCACCACGCCACTGGTGGCCCTGCCC...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGGGTGGCTCGGCCGGGTaGGAGCCGGGGTACGAGTGC +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEGGSAG*EPGYEC
Trigger: GCACTCGTACCCCGGCTCCCACCCGGCCGAGCCACC...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACCTGTCACAGTTGCTGTaGTGGCGTGCGTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDLSQLL*WRACVG
Trigger: CCCAACACACGCACGCCACCACAGCAACTGTGACAG...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGTGGACAGGTCGATGTTaGCGATGTTGGGACACTCCC +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTWTGRC*RCWDTP
Trigger: GGGAGTGTCCCAACATCGTCAACATCGACCTGTCCA...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGTCCTCGGTGCAGACTaGCTGCAGTTTGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RATRGDKRIPGPATGARDVLGAD*LQFAED
Trigger: ATCCTCAGCAAACTGCAGTCAGTCTGCACCGAGGAC...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGGATCAGCCAGCAGTCTaGGCGGGCCAGGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQDQPAV*AGQAAS
Trigger: GCTGGCGGCCTGGCCCGCGCAGACTGCTGGCTGATC...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGTCGATGAGGTTGGCCTaGAGGTACAGGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTSMRLA*RYRYSS
Trigger: GCTGGAGTACCTGTACCTGCAGGCCAACCTCATCGA...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTGCGACTCGCACTGCATaGGGTCGTACGTCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPATRTA*GRTSVW
Trigger: CCACACAGACGTACGACCGCATGCAGTGCGAGTCGC...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGCCTGGCGCCGCCGCCTaGGCAGGCAGTAGTAGACGG +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEPGAAA*AGSSRR
Trigger: CCGTCTACTACTGCCTGCGCAGGCGGCGGCGCCAGG...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGCCAGGATGGACGCCTTaGGCCCCAGGCCCTCGTGCG +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEPGWTP*APGPRA
Trigger: CGCACGAGGGCCTGGGGCGCAAGGCGTCCATCCTGG...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGCCCGGATGCTGGACGTaGGGGCCCGACCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEPGCWT*GPDHLS
Trigger: GCTGAGGTGGTCGGGCCCCCACGTCCAGCATCCGGG...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGGGCGCAGCCCGGCGCTaGTGGACACCACGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEGAARR*WTPRSR
Trigger: CCTACTGCGTGGTGTCCACCAGCGCCGGGCTGCGCC...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATGGTGGCTCGGCCGGGTaGGAGCCGGGGTACGAGTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHGGSAG*EPGYEC
Trigger: GCACTCGTACCCCGGCTCCCACCCGGCCGAGCCACC...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGCCCTTGGCCGTCCTaGCCACCCCGGCCGTCCACA +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQSPWPS*PPRPST
Trigger: TGTGGACGGCCGGGGTGGCCAGGACGGCCAAGGGCT...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCAGCCCTTGGCCGTCCTaGCCACCCCGGCCGTCCACA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRSPWPS*PPRPST
Trigger: TGTGGACGGCCGGGGTGGCCAGGACGGCCAAGGGCT...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGACATGGGGGCTGGGCTaGGGGACGTGCCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTETWGLG*GTCLPA
Trigger: GGCTGGGAGGCACGTCCCCCAGCCCAGCCCCCATGT...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCATGGTGGCCGAGTTCTaGGTGAGCTGCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELMVAEF*VSCLTL
Trigger: CAAGGTCAAGCAGCTCACTCAGAACTCGGCCACCAT...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTAGGTGGACTCGGACTTaGGCGCGTCGATGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPRWTRT*ARRCSC
Trigger: ACAACTGCATCGACGCGCTCAAGTCCGAGTCCACCT...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGACCGAGGAGATCACGTaGGGGGCCCCGAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTETEEIT*GAPRWP
Trigger: TGGCCACCTCGGGGCCCCTCACGTGATCTCCTCGGT...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCGGCGGGAGGGGGAGGTaGCTGCACTCTCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRGGRGR*LHSQGC
Trigger: ACACCCCTGAGAGTGCAGGCACCTCCCCCTCCCGCC...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGCTTGAGGCTGCCAGCTaGGGCTGCCGAGGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTELEAAS*GCRGGL
Trigger: AAGGCCGCCTCGGCAGCCGCAGCTGGCAGCCTCAAG...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCCTTGAGGCTGCCAGCTaGGGCTGCCGAGGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRLEAAS*GCRGGL
Trigger: AAGGCCGCCTCGGCAGCCGCAGCTGGCAGCCTCAAG...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGCCAGCTCACAGTCCCTaGGTTCCGGAGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQPAHSP*VPEGPR
Trigger: CCGGGGACCCTCCGGAACGCAGGGACTGTGAGCTGG...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGACGCTGTGGTGCCGCTaGAGGCTGTGGCCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTETLWCR*RLWPKA
Trigger: CGCCTTCGGCCACAGCCTGCAGCGGCACCACAGCGT...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATGCCTCCACGCTGTGGTaGCGCTGCAGGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHASTLW*RCRLWP
Trigger: CGGCCACAGCCTGCAGCGGCACCACAGCGTGGAGGC...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCGTTGCTGTGGTGGCGTaGGTGTGTTGGGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPVAVVA*VCWVWC
Trigger: GCACCAAACCCAACACACGCACGCCACCACAGCAAC...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTCCGCTGTTGAGCTGCTaGATGCGGTTCATGGACAGG +
Preference number: 4 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPPLLSC*MRFMDR
Trigger: CCTGTCCATGAACCGCATCCAGCAGCTCAACAGCGG...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATGGGCCACCAGTGGCGTaGTGCCGTCCCCGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHGPPVA*CRPRRS
Trigger: GCTTCTCCGGGGACGGCACCACGCCACTGGTGGCCC...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGAGGCAGGTGTGGTTGTaGCGCAGCCCGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAERQVWL*RSPALV
Trigger: CACCAGCGCCGGGCTGCGCCACAACCACACCTGCCT...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGTTGTGCTTCTCCTCCTaGCGCCGCCGCCTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAELCFSS*RRRLRR
Trigger: CCTGCGCAGGCGGCGGCGCCAGGAGGAGAAGCACAA...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCCCAGGAAGCCGTGCTTaGCGGCCAGCGGCTCGGACA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRPGSRA*RPAART
Trigger: TGTCCGAGCCGCTGGCCGCCAAGCACGGCTTCCTGG...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCTGCGCACGGAGCCGCTaGACGAGGTGCTGGCACGAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRCARSR*TRCWHE
Trigger: CTCGTGCCAGCACCTCGTCCAGCGGCTCCGTGCGCA...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGCGGTGCTCGCCGTACTaGCGACCCTTCTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTERCSPY*RPFSAS
Trigger: CGAGGCCGAGAAGGGTCGCCAGTACGGCGAGCACCG...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGCGGTGCTCGCCGTACTaGCGACCCTTCTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAERCSPY*RPFSAS
Trigger: CGAGGCCGAGAAGGGTCGCCAGTACGGCGAGCACCG...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCTCCTTTTTGGTCCAGTaGGCATCGCCGGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPSFLVQ*ASPVLG
Trigger: CCCCAAGACCGGCGATGCCCACTGGACCAAAAAGGA...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCGGTTGCCAAAGCGGCTaGGCGAGGCGTACTGCACGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRGCQSG*ARRTAR
Trigger: GCGTGCAGTACGCCTCGCTCAGCCGCTTTGGCAACC...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGTCTGTGTGGCGTTGGTaGAGGCGGCCAGCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQSVWRW*RRPASA
Trigger: TGCGCTGGCTGGCCGCCTTCACCAACGCCACACAGA...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGTCTGTGTGGCGTTGGTaGAGGCGGCCAGCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTESVWRW*RRPASA
Trigger: TGCGCTGGCTGGCCGCCTTCACCAACGCCACACAGA...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGGCCGGCGGCTCAGTCTaGAGCGCTCCCAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEAGGSV*SAPRCS
Trigger: AGAGCATCTGGGAGCGCTTCAGACTGAGCCGCCGGC...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGTGGAGGATTCCTCCCTaGTGGGCTCAAAGACATGTT +
Preference number: 4 (lower is better)
Translates to: VPPGATSASQDRPQELGTWRIPP*WAQRHV
Trigger: AACATGTCTTTGAGCCCAGCAGGGAGGAATCCTCCA...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCTCCACTGACTCCTCCTaGTCCGACGTTCCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPSTDSS*SDVPVV
Trigger: CACAACAGGAACGTCGGAGCAGGAGGAGTCAGTGGA...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGGGAGGGGGAGGTGCCTaGACTCTCAGGGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEGGGGA*TLRGVL
Trigger: CAGGACACCCCTGAGAGTGCAGGCACCTCCCCCTCC...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGCCATCGGGACCGCCCTaGAGGGAGCCCCAATTCAGC +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEPSGPP*REPQFS
Trigger: GCTGAATTGGGGCTCCCTGCAGGGCGGTCCCGATGG...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCTCGATGAGGTTGGCCTaGAGGTACAGGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPSMRLA*RYRYSS
Trigger: GCTGGAGTACCTGTACCTGCAGGCCAACCTCATCGA...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGGGGGCTCAGGACTTGTaGTGGGCCGACACGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEGAQDL*WADTPF
Trigger: GAAGGGCGTGTCGGCCCAGCACAAGTCCTGAGCCCC...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGGTGTGTGTGGACACGTaGCACCCGGGGCGACAAGCG +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEVCVDT*HPGRQA
Trigger: CGCTTGTCGCCCCGGGTGGCACGTGTCCACACACAC...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGGTGTGTGTGGACACGTaGCACCCGGGGCGACAAGCG +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEVCVDT*HPGRQA
Trigger: CGCTTGTCGCCCCGGGTGGCACGTGTCCACACACAC...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATCGGCGCAGCCCGGCGCTaGTGGACACCACGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PLQWTPEAAMKRRTGQRIGAARR*WTPRSR
Trigger: CCTACTGCGTGGTGTCCACCAGCGCCGGGCTGCGCC...GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGATGGTGAGGCAGGTGTaGTTGTGGCGCAGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEMVRQV*LWRSPA
Trigger: CGCCGGGCTGCGCCACAACCACACCTGCCTCACCAT...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGTGCCCTTGCTGGCCTTaGGGGTGTCCGCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQCPCWP*GCPRSP
Trigger: TGGAGAGCGCGGACACCCCCAAGGCCAGCAAGGGCA...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGCCTTCTCGATGTACTTaGCCTCGGCGGCCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEPSRCT*PRRPRP
Trigger: AGGCCGCGGCCGCCGAGGCCAAGTACATCGAGAAGG...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGGTCCCGGAGGCCACTTaGCCGCCGGCATTCACTCTG +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEVPEAT*PPAFTL
Trigger: CAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGAC...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCAGTGTACATGGGGGCTaGGCTGGGGGACGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRSVHGG*AGGRAS
Trigger: GGAGGCACGTCCCCCAGCCCAGCCCCCATGTACACT...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATGCAGCACCTGCAGGTTaGACTGGCCCGAGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHAAPAG*TGPRRR
Trigger: GCGCCTTCTCGGGCCAGTTCAACCTGCAGGTGCTGC...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGTGGGCAGCTGGACGGTaGTGGTGGCCGAGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEWAAGR*WWPSSE
Trigger: CTCAGAACTCGGCCACCATCACCGTCCAGCTGCCCA...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGGGGGCAAGCAGATGGTaGGGCAGGTGTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQGASRW*GRCGCG
Trigger: GCCACAACCACACCTGCCTCACCATCTGCTTGCCCC...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp CCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATCGTGACCGAGGCCTCCTaGCCCATGGGCCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PLQWTPEAAMKRRTGQRIVTEAS*PMGLGV
Trigger: GACACCCAGGCCCATGGGGCAGGAGGCCTCGGTCAC...GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp CCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATCCAGGCAGGTAAGGGATaGGCGTCACGGCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PLQWTPEAAMKRRTGQRIQAGKG*ASRPRG
Trigger: GCCCCGAGGCCGTGACGCGCATCCCTTACCTGCCTG...GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp CCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATCCCAGCTCACAGTCCCTaGGTTCCGGAGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PLQWTPEAAMKRRTGQRIPAHSP*VPEGPR
Trigger: CCGGGGACCCTCCGGAACGCAGGGACTGTGAGCTGG...GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCCCAGGATGGACGCCTTaGGCCCCAGGCCCTCGTGCG +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGPGWTP*APGPRA
Trigger: CGCACGAGGGCCTGGGGCGCAAGGCGTCCATCCTGG...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGCCCCGCTGTCACAGTTaGTGTGGTGGCGTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEPRCHS*CGGVRV
Trigger: CACACGCACGCCACCACAGCAACTGTGACAGCGGGG...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGCGCCGGCATTCACTCTaGCCCTCTGCAGTGGACTCC +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTERRHSL*PSAVDS
Trigger: GGAGTCCACTGCAGAGGGGCAGAGTGAATGCCGGCG...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGACAGCGTGCAGCAGGGTaGCGGCCGCCACGCACACCC +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRQRAAG*RPPRTP
Trigger: GGGTGTGCGTGGCGGCCGCCACCCTGCTGCACGCTG...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAGGGTGTACATCCGGTaGAACGGGCTGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTERVYIR*NGLGSW
Trigger: CCAGCTGCCCAGCCCGTTCCACCGGATGTACACCCT...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGACCGGACCAGGCGGGCTaGGCAGCCGGGGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRPDQAG*AAGASR
Trigger: TCTGCTTGCCCCGGCTGCCCAGCCCGCCTGGTCCGG...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCTGCCGCTGCAGGCTGTaGCCGAAGGCGTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRCRCRL*PKASLY
Trigger: GTACAAGGACGCCTTCGGCCACAGCCTGCAGCGGCA...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGGCTCAGGACTTGTGCTaGGCCGACACGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEAQDLC*ADTPFQ
Trigger: CTGGAAGGGCGTGTCGGCCCAGCACAAGTCCTGAGC...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCTTGGTGCTGAGTCTCTaGGTGGATCCTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: GHVPPGATSASQDRPQELLVLSL*VDPASF
Trigger: AAAGGATGCAGGATCCACCCAGAGACTCAGCACCAA...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGGTGTGTGTGTGTGTGTaGACACGTGCCACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEVCVCV*TRATRG
Trigger: GCCCCGGGTGGCACGTGTCCACACACACACACACAC...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGCGACTACAGTGTACATaGGGGCTGGGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTERLQCT*GLGWGT
Trigger: CGTCCCCCAGCCCAGCCCCCATGTACACTGTAGTCG...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGGGATACGGTTCTCGTTaGGCCGCAGGTCCACGATGG +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEGYGSR*AAGPRW
Trigger: CCATCGTGGACCTGCGGCTCAACGAGAACCGTATCC...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGCGAAGGTGCCGCTGTTaGGCTGCTGGATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQRRCRC*AAGCGS
Trigger: TGAACCGCATCCAGCAGCTCAACAGCGGCACCTTCG...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATCTGACTGCAGTTTGCTaGGGATGCTGCGGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHLTAVC*GCCGGR
Trigger: GCGGCCACCGCAGCATCCTCAGCAAACTGCAGTCAG...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGCTCCGGAGGCGGCAATaGAGAGACGGACTGGACAGA +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTELRRRQ*RDGLDR
Trigger: TCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAG...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGGCGACTCGCACTGCATaGGGTCGTACGTCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEATRTA*GRTSVW
Trigger: CCACACAGACGTACGACCGCATGCAGTGCGAGTCGC...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATGGCGGCGACTCGCACTaGATGCGGTCGTACGTCTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHGGDSH*MRSYVC
Trigger: ACAGACGTACGACCGCATGCAGTGCGAGTCGCCGCC...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGACCTGGCGCCGCCGCCTaGGCAGGCAGTAGTAGACGG +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRPGAAA*AGSSRR
Trigger: CCGTCTACTACTGCCTGCGCAGGCGGCGGCGCCAGG...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATCCATGTAGCTGCCCTTaGTGGCCTTGGGGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHPCSCP*WPWGCP
Trigger: CGGACACCCCCAAGGCCAGCAAGGGCAGCTACATGG...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCGAACCTCCATGTAGCTaGCCTTGCTGGCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKREPPCS*PCWPWG
Trigger: CCCCCAAGGCCAGCAAGGGCAGCTACATGGAGGTTC...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGGGCGCCAGGAAGCCGTaGTTGGCGGCCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITGARKP*LAASGS
Trigger: CGAGCCGCTGGCCGCCAAGCACGGCTTCCTGGCGCC...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGGCGCCAGGAAGCCGTaGTTGGCGGCCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: EETDWTENPQKTTDRGDHGARKP*LAASGS
Trigger: CGAGCCGCTGGCCGCCAAGCACGGCTTCCTGGCGCC...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCGAGCCGGGGTACGAGTaGCGGTGCTCGCCGTACTGG +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGEPGYE*RCSPYW
Trigger: CCAGTACGGCGAGCACCGGCACTCGTACCCCGGCTC...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATGGGCGCCTCCAGCTCTaGCCCGTACTTGAGCTCGAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHGRLQL*PVLELD
Trigger: ATCGAGCTCAAGTACGGGCCAGAGCTGGAGGCGCCC...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACTCGGCCACCGAACTCTaGCTGTCGGGGCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: EETDWTENPQKTTDRGDHSATEL*LSGPGR
Trigger: CCGGCCGGGCCCCGACAGCCAGAGTTCGGTGGCCGA...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAACATGGGGGCTGGGCTaGGGGACGTGCCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRTWGLG*GTCLPA
Trigger: GGCTGGGAGGCACGTCCCCCAGCCCAGCCCCCATGT...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATCTGAGCGAGGCGTACTaGACGCTGCGGATACGGTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHLSEAY*TLRIRF
Trigger: GAACCGTATCCGCAGCGTGCAGTACGCCTCGCTCAG...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCTTGCTGTTGTTGAAATaGTCCAGGGTGTACATCCGG +
Preference number: 4 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPLLLLK*SRVYIR
Trigger: CCGGATGTACACCCTGGAGCATTTCAACAACAGCAA...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGCTGCCAGCTGCGGCTaGCGAGGCGGCCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRAASCG*RGGLLV
Trigger: CACAAGAAGGCCGCCTCGGCAGCCGCAGCTGGCAGC...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGGTTGCTGTGGTGGCGTaGGTGTGTTGGGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEVAVVA*VCWVWC
Trigger: GCACCAAACCCAACACACGCACGCCACCACAGCAAC...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGCAGCGAGGAATAGGCTaGAGGATTCCTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQQRGIG*RIPPCW
Trigger: CCAGCAGGGAGGAATCCTCCAGCCTATTCCTCGCTG...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCCCGCTGTTGAGCTGCTaGATGCGGTTCATGGACAGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRPLLSC*MRFMDR
Trigger: CCTGTCCATGAACCGCATCCAGCAGCTCAACAGCGG...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACCACAGGGCATGTCACTaGGCTCCGGCGGAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: EETDWTENPQKTTDRGDHHRACH*APAEAG
Trigger: CCCCGCCTCCGCCGGAGCCCAGTGACATGCCCTGTG...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGACCGCGGCCGGGTGAGTaGCTCCAGGATGGACGCCTT +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRPRPGE*LQDGRL
Trigger: AAGGCGTCCATCCTGGAGCCACTCACCCGGCCGCGG...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCAGGTGTACTCGGGGCTaGAGGAGTAGCTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRRCTRG*RSSSGC
Trigger: ACAGCCTGAGCTACTCCTCCAGCCCCGAGTACACCT...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGTCCTTTTTGGTCCAGTaGGCATCGCCGGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQSFLVQ*ASPVLG
Trigger: CCCCAAGACCGGCGATGCCCACTGGACCAAAAAGGA...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
3UTR CAA 72 bp CCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTaGGGTTTGGTGCTGAGTCTCTGGGTGGATCCTGCA +
Preference number: 4 (lower is better)
Translates to: PRCHSCCGGVRV*GLVLSLWVDPA
Trigger: TGCAGGATCCACCCAGAGACTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATCCACGATGGTGCTGTTaGTCTGCTGTGGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHPRWCC*SAVGWP
Trigger: AGGCCATCCCACAGCAGATCAACAGCACCATCGTGG...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCTGGACAGGTCGATGTTaGCGATGTTGGGACACTCCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRWTGRC*RCWDTP
Trigger: GGGAGTGTCCCAACATCGTCAACATCGACCTGTCCA...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGGTCCTCGGTGCAGACTaGCTGCAGTTTGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQVLGAD*LQFAED
Trigger: ATCCTCAGCAAACTGCAGTCAGTCTGCACCGAGGAC...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGTCCACTGACTCCTCCTaGTCCGACGTTCCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQSTDSS*SDVPVV
Trigger: CACAACAGGAACGTCGGAGCAGGAGGAGTCAGTGGA...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGACCATCGGGACCGCCCTaGAGGGAGCCCCAATTCAGC +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRPSGPP*REPQFS
Trigger: GCTGAATTGGGGCTCCCTGCAGGGCGGTCCCGATGG...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCCCCAGCTGCAGCACCTaGAGGTTGAACTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGPSCST*RLNWPE
Trigger: CTCGGGCCAGTTCAACCTGCAGGTGCTGCAGCTGGG...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGCGTACGAGTCCTCGGTaGAGACTGACTGCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQRTSPR*RLTAVC
Trigger: GCAAACTGCAGTCAGTCTGCACCGAGGACTCGTACG...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGGGGTACGAGTGCCGGTaGTCGCCGTACTGGCGACCC +
Preference number: 4 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITGYECR*SPYWRP
Trigger: GGGTCGCCAGTACGGCGAGCACCGGCACTCGTACCC...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCTCCTCTTCCTCCTTGTaGCGCCGGCGGCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGSSSSL*RRRLSL
Trigger: CAGACTGAGCCGCCGGCGGCACAAGGAGGAAGAGGA...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATCAGCGAGGAATAGGCTaGAGGATTCCTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHQRGIG*RIPPCW
Trigger: CCAGCAGGGAGGAATCCTCCAGCCTATTCCTCGCTG...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGACTGTCCCAAACCGCATaGCCGCGCGACGTAAGCGCG +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRLSQTA*PRDVSA
Trigger: CGCGCTTACGTCGCGCGGCCATGCGGTTTGGGACAG...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCACCTGCAGGTTGAACTaGCCCGAGAAGGCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGTCRLN*PEKAPS
Trigger: GGACGGCGCCTTCTCGGGCCAGTTCAACCTGCAGGT...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGCGCACACCGACAGCTTaGCCAGGCCGGCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITRTPTA*PGRRRC
Trigger: GCACCTTCGCCGGCCTGGCCAAGCTGTCGGTGTGCG...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCAGGGTGTACATCCGGTaGAACGGGCTGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGRVYIR*NGLGSW
Trigger: CCAGCTGCCCAGCCCGTTCCACCGGATGTACACCCT...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATAGGTGTACTCGGGGCTaGAGGAGTAGCTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHRCTRG*RSSSGC
Trigger: ACAGCCTGAGCTACTCCTCCAGCCCCGAGTACACCT...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGACGCTCCCAGATGCTCTaGGAGGCCCGGCAGGTGTAC +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRRSQML*EARQVY
Trigger: GTACACCTGCCGGGCCTCCCAGAGCATCTGGGAGCG...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCTCTGCCCCTCTGCAGTaGACTCCGGAGGCGGCAATG +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGSAPLQ*TPEAAM
Trigger: CATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCCGACTACAGTGTACATaGGGGCTGGGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGRLQCT*GLGWGT
Trigger: CGTCCCCCAGCCCAGCCCCCATGTACACTGTAGTCG...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCCGAAGGTGCCGCTGTTaGGCTGCTGGATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGRRCRC*AAGCGS
Trigger: TGAACCGCATCCAGCAGCTCAACAGCGGCACCTTCG...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGCCGGCGGCTCAGTCTaGAGCGCTCCCAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: EETDWTENPQKTTDRGDHAGGSV*SAPRCS
Trigger: AGAGCATCTGGGAGCGCTTCAGACTGAGCCGCCGGC...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGTCGGTGCAGACTGACTaGAGTTTGCTGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQSVQTD*SLLRML
Trigger: CAGCATCCTCAGCAAACTGCAGTCAGTCTGCACCGA...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATCGTACGAGTCCTCGGTaGAGACTGACTGCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHRTSPR*RLTAVC
Trigger: GCAAACTGCAGTCAGTCTGCACCGAGGACTCGTACG...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGCCACCAGTGGCGTGGTaGCGTCCCCGGAGAAGCACT +
Preference number: 4 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITPPVAW*RPRRST
Trigger: AGTGCTTCTCCGGGGACGGCACCACGCCACTGGTGG...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGATCCACCAGCTTGTACTaGTCCACCTCGCCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRSTSLY*STSPAA
Trigger: TGCGGCCGGCGAGGTGGAGCAGTACAAGCTGGTGGA...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATCACAGAAGGACAGCCTaGGTCCGGACAAACTGTAGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHHRRTA*VRTNCR
Trigger: CCTACAGTTTGTCCGGACCCAGGCTGTCCTTCTGTG...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424383.4
CDS-3UTR CCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCCCTCCTTGGCGATGGTaGAGATCTCGGCCACCGAAC +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGPPWRW*RSRPPN
Trigger: GTTCGGTGGCCGAGATCTCCACCATCGCCAAGGAGG...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp CCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATCCTGTCACAGTTGCTGTaGTGGCGTGCGTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: PLQWTPEAAMKRRTGQRILSQLL*WRACVG
Trigger: CCCAACACACGCACGCCACCACAGCAACTGTGACAG...GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTCCCGGAGGCCACTTaGCCGCCGGCATTCACTCTG +
Preference number: 4 (lower is better)
Translates to: EETDWTENPQKTTDRGDHVPEAT*PPAFTL
Trigger: CAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGAC...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp CCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATCATGGTGGCCGAGTTCTaGGTGAGCTGCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: PLQWTPEAAMKRRTGQRIMVAEF*VSCLTL
Trigger: CAAGGTCAAGCAGCTCACTCAGAACTCGGCCACCAT...GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGGGGGCAAGCAGATGGTaGGGCAGGTGTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITGASRW*GRCGCG
Trigger: GCCACAACCACACCTGCCTCACCATCTGCTTGCCCC...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGACTCCGGAGGCGGCAATaGAGAGACGGACTGGACAGA +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRLRRRQ*RDGLDR
Trigger: TCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAG...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGGCGGCGACTCGCACTaGATGCGGTCGTACGTCTGT +
Preference number: 4 (lower is better)
Translates to: EETDWTENPQKTTDRGDHGGDSH*MRSYVC
Trigger: ACAGACGTACGACCGCATGCAGTGCGAGTCGCCGCC...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACCCATGTAGCTGCCCTTaGTGGCCTTGGGGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: EETDWTENPQKTTDRGDHPCSCP*WPWGCP
Trigger: CGGACACCCCCAAGGCCAGCAAGGGCAGCTACATGG...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGAACCTCCATGTAGCTaGCCTTGCTGGCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDREPPCS*PCWPWG
Trigger: CCCCCAAGGCCAGCAAGGGCAGCTACATGGAGGTTC...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGCGAACTGAACCTTCTTaGGCAGGGCATGGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITRTEPS*AGHGPR
Trigger: CCGCGGGCCATGCCCTGCGCAAGAAGGTTCAGTTCG...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGTCTCTGGGTGGATCCTaGATCCTTTTTGGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTESLGGS*ILFGPV
Trigger: CACTGGACCAAAAAGGATGCAGGATCCACCCAGAGA...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGGGCGCCTCCAGCTCTaGCCCGTACTTGAGCTCGAT +
Preference number: 4 (lower is better)
Translates to: EETDWTENPQKTTDRGDHGRLQL*PVLELD
Trigger: ATCGAGCTCAAGTACGGGCCAGAGCTGGAGGCGCCC...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGTTGGTGCTGAGTCTCTaGGTGGATCCTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: CPSAVDSGGGNEETDWTELVLSL*VDPASF
Trigger: AAAGGATGCAGGATCCACCCAGAGACTCAGCACCAA...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATTCACAGTTGCTGTGGTaGCGTGCGTGTGTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHSQLLW*RACVGF
Trigger: AAACCCAACACACGCACGCCACCACAGCAACTGTGA...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGGATACGGTTCTCGTTaGGCCGCAGGTCCACGATGG +
Preference number: 4 (lower is better)
Translates to: EETDWTENPQKTTDRGDHGYGSR*AAGPRW
Trigger: CCATCGTGGACCTGCGGCTCAACGAGAACCGTATCC...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGCTGAGCGAGGCGTACTaGACGCTGCGGATACGGTTC +
Preference number: 4 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITLSEAY*TLRIRF
Trigger: GAACCGTATCCGCAGCGTGCAGTACGCCTCGCTCAG...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCAGCAGTAGAAGGGGTTaGTGTAGAGCTCGCACACCG +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGSSRRG*CRARTP
Trigger: CGGTGTGCGAGCTCTACAGCAACCCCTTCTACTGCT...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGCCTCCTTGGCGATGGTaGAGATCTCGGCCACCGAAC +
Preference number: 4 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITPPWRW*RSRPPN
Trigger: GTTCGGTGGCCGAGATCTCCACCATCGCCAAGGAGG...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCATCCTGCATCCTTTTTaGTCCAGTGGGCATCGCCGG +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGILHPF*SSGHRR
Trigger: CCGGCGATGCCCACTGGACCAAAAAGGATGCAGGAT...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACCCACGATGGTGCTGTTaGTCTGCTGTGGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: EETDWTENPQKTTDRGDHPRWCC*SAVGWP
Trigger: AGGCCATCCCACAGCAGATCAACAGCACCATCGTGG...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp CCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATCAGGCCTTGCTGTTGTTaGAATGCTCCAGGGTGTACA +
Preference number: 4 (lower is better)
Translates to: PLQWTPEAAMKRRTGQRIRPCCC*NAPGCT
Trigger: TGTACACCCTGGAGCATTTCAACAACAGCAAGGCCT...GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGATGTTGGGTTTGGTGCTaGGTCTCTGGGTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRCWVWC*VSGWIL
Trigger: CAGGATCCACCCAGAGACTCAGCACCAAACCCAACA...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGCCGCTGTTGAGCTaGTGGATGCGGTTCATGGAC +
Preference number: 4 (lower is better)
Translates to: EETDWTENPQKTTDRGDHVPLLS*WMRFMD
Trigger: GTCCATGAACCGCATCCAGCAGCTCAACAGCGGCAC...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAAGCAGTAGAAGGGGTTaGTGTAGAGCTCGCACACCG +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRSSRRG*CRARTP
Trigger: CGGTGTGCGAGCTCTACAGCAACCCCTTCTACTGCT...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACTGTTGGGTTTGGTGCTaGGTCTCTGGGTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: EETDWTENPQKTTDRGDHCWVWC*VSGWIL
Trigger: CAGGATCCACCCAGAGACTCAGCACCAAACCCAACA...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGATCACAGTTGCTGTGGTaGCGTGCGTGTGTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRSQLLW*RACVGF
Trigger: AAACCCAACACACGCACGCCACCACAGCAACTGTGA...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR TCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAAGGCCTTGCTGTTGTTaGAATGCTCCAGGGTGTACA +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRRPCCC*NAPGCT
Trigger: TGTACACCCTGGAGCATTTCAACAACAGCAAGGCCT...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGATGGAGGATTCCTCCCTaGTGGGCTCAAAGACATGTT +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRWRIPP*WAQRHV
Trigger: AACATGTCTTTGAGCCCAGCAGGGAGGAATCCTCCA...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTCGGTGCAGACTGACTaGAGTTTGCTGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITSVQTD*SLLRML
Trigger: CAGCATCCTCAGCAAACTGCAGTCAGTCTGCACCGA...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCTTGCTGTTGTTGAAATaGTCCAGGGTGTACATCCGG +
Preference number: 4 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGLLLLK*SRVYIR
Trigger: CCGGATGTACACCCTGGAGCATTTCAACAACAGCAA...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR GCA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTCTCTGGGTGGATCCTaGATCCTTTTTGGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITSLGGS*ILFGPV
Trigger: CACTGGACCAAAAAGGATGCAGGATCCACCCAGAGA...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAAATGAAGAGACGGACTaGACAGAGAATCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: GGNEETDWTENPQKTTDRNEETD*TENPQK
Trigger: TTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATT...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CCA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGAATGAAGAGACGGACTaGACAGAGAATCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITNEETD*TENPQK
Trigger: TTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATT...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp CGGCTCGGAAGGCGCGGGGGCTGCGCACGGAGCCGCTGGACGAGGTaGTGGCACGAGGGGGCCCGGCGGCCTCCACGCTGTGGTGCCGCT +
Preference number: 5 (lower is better)
Translates to: RLGRRGGCARSRWTR*WHEGARRPPRCGAA
Trigger: AGCGGCACCACAGCGTGGAGGCCGCCGGGCCCCCTCGTGCCAGCACCTCGTCCAGCGGCTCCGTGCGCAGCCCCCGCGCCTTCCGAGCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 90 bp CGACGGCCTCGGCTCGGAAGGCGCGGGGGCTGCGCACGGAGCCGCTaGACGAGGTGCTGGCACGAGGGGGCCCGGCGGCCTCCACGCTGT +
Preference number: 5 (lower is better)
Translates to: RRPRLGRRGGCARSR*TRCWHEGARRPPRC
Trigger: ACAGCGTGGAGGCCGCCGGGCCCCCTCGTGCCAGCACCTCGTCCAGCGGCTCCGTGCGCAGCCCCCGCGCCTTCCGAGCCGAGGCCGTCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 90 bp CTCGGAAGGCGCGGGGGCTGCGCACGGAGCCGCTGGACGAGGTGCTaGCACGAGGGGGCCCGGCGGCCTCCACGCTGTGGTGCCGCTGCA +
Preference number: 5 (lower is better)
Translates to: LGRRGGCARSRWTRC*HEGARRPPRCGAAA
Trigger: TGCAGCGGCACCACAGCGTGGAGGCCGCCGGGCCCCCTCGTGCCAGCACCTCGTCCAGCGGCTCCGTGCGCAGCCCCCGCGCCTTCCGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp TCGCCCTCGATCAGCCAGCAGTCTGCGCGGGCCAGGCCGCCAGCGTaGAGCAGGGTGGCGGCCGCCACGCACACCCACAGCGCGCCCCAC +
Preference number: 5 (lower is better)
Translates to: SPSISQQSARARPPA*SRVAAATHTHSAPH
Trigger: GTGGGGCGCGCTGTGGGTGTGCGTGGCGGCCGCCACCCTGCTGCACGCTGGCGGCCTGGCCCGCGCAGACTGCTGGCTGATCGAGGGCGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp GACGAGGTGCTGGCACGAGGGGGCCCGGCGGCCTCCACGCTGTGGTaGCGCTGCAGGCTGTGGCCGAAGGCGTCCTTGTACCCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: DEVLARGGPAASTLW*RCRLWPKASLYPGA
Trigger: GGCGCCCGGGTACAAGGACGCCTTCGGCCACAGCCTGCAGCGGCACCACAGCGTGGAGGCCGCCGGGCCCCCTCGTGCCAGCACCTCGTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 90 bp GGACAGCTGCGAGTAGGCGAGGTCGCGGGGCCGCGGCCGGGTGAGTaGCTCCAGGATGGACGCCTTGCGCCCCAGGCCCTCGTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: GQLRVGEVAGPRPGE*LQDGRLAPQALVRR
Trigger: CCTCCGCACGAGGGCCTGGGGCGCAAGGCGTCCATCCTGGAGCCACTCACCCGGCCGCGGCCCCGCGACCTCGCCTACTCGCAGCTGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp GTGCTGGCACGAGGGGGCCCGGCGGCCTCCACGCTGTGGTGCCGCTaGAGGCTGTGGCCGAAGGCGTCCTTGTACCCGGGCGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VLARGGPAASTLWCR*RLWPKASLYPGARK
Trigger: CTTCCTGGCGCCCGGGTACAAGGACGCCTTCGGCCACAGCCTGCAGCGGCACCACAGCGTGGAGGCCGCCGGGCCCCCTCGTGCCAGCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 90 bp GGGGCGGGCCTCGGCCTGCGTGGCCAGCGTGGGCAGGGCCACCAGTaGCGTGGTGCCGTCCCCGGAGAAGCACTCATCATCGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: GAGLGLRGQRGQGHQ*RGAVPGEALIIGTG
Trigger: CCCTGTGCCGATGATGAGTGCTTCTCCGGGGACGGCACCACGCCACTGGTGGCCCTGCCCACGCTGGCCACGCAGGCCGAGGCCCGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 90 bp CGAGGGGGCCCGGCGGCCTCCACGCTGTGGTGCCGCTGCAGGCTGTaGCCGAAGGCGTCCTTGTACCCGGGCGCCAGGAAGCCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: RGGPAASTLWCRCRL*PKASLYPGARKPCL
Trigger: CAAGCACGGCTTCCTGGCGCCCGGGTACAAGGACGCCTTCGGCCACAGCCTGCAGCGGCACCACAGCGTGGAGGCCGCCGGGCCCCCTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 90 bp CTGGACGAGGTGCTGGCACGAGGGGGCCCGGCGGCCTCCACGCTGTaGTGCCGCTGCAGGCTGTGGCCGAAGGCGTCCTTGTACCCGGGC +
Preference number: 5 (lower is better)
Translates to: LDEVLARGGPAASTL*CRCRLWPKASLYPG
Trigger: GCCCGGGTACAAGGACGCCTTCGGCCACAGCCTGCAGCGGCACCACAGCGTGGAGGCCGCCGGGCCCCCTCGTGCCAGCACCTCGTCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp CCAGCTTGTACTGCTCCACCTCGCCGGCCGCAGGCAGGTAAGGGATaGGCGTCACGGCCTCGGGGCCCAGCAGCGGGCCCTGGGACAGCG +
Preference number: 5 (lower is better)
Translates to: PACTAPPRRPQAGKG*ASRPRGPAAGPGTA
Trigger: CGCTGTCCCAGGGCCCGCTGCTGGGCCCCGAGGCCGTGACGCGCATCCCTTACCTGCCTGCGGCCGGCGAGGTGGAGCAGTACAAGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp AGGCTGTGGCCGAAGGCGTCCTTGTACCCGGGCGCCAGGAAGCCGTaGTTGGCGGCCAGCGGCTCGGACAGCAGCACCAGCGGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: RLWPKASLYPGARKP*LAASGSDSSTSGGS
Trigger: GGAGCCGCCGCTGGTGCTGCTGTCCGAGCCGCTGGCCGCCAAGCACGGCTTCCTGGCGCCCGGGTACAAGGACGCCTTCGGCCACAGCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 90 bp TGTGGCCGAAGGCGTCCTTGTACCCGGGCGCCAGGAAGCCGTGCTTaGCGGCCAGCGGCTCGGACAGCAGCACCAGCGGCGGCTCCGCGA +
Preference number: 5 (lower is better)
Translates to: CGRRRPCTRAPGSRA*RPAARTAAPAAAPR
Trigger: TCGCGGAGCCGCCGCTGGTGCTGCTGTCCGAGCCGCTGGCCGCCAAGCACGGCTTCCTGGCGCCCGGGTACAAGGACGCCTTCGGCCACA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGGTGAGGCAGGTGTGGTaGTGGCGCAGCCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: VPPGATSASQDRPQELGTVRQVW*WRSPAL
Trigger: CAGCGCCGGGCTGCGCCACAACCACACCTGCCTCAC...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACCCCTTCTCGATGTACTaGGCCTCGGCGGCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: RATRGDKRIPGPATGARDPFSMY*ASAAAA
Trigger: GGCCGCGGCCGCCGAGGCCAAGTACATCGAGAAGGG...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACTCCAGGATGGACGCCTaGCGCCCCAGGCCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: RATRGDKRIPGPATGARDSRMDA*RPRPSC
Trigger: GCACGAGGGCCTGGGGCGCAAGGCGTCCATCCTGGA...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCCCCTTCTCGATGTACTaGGCCTCGGCGGCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: GHVPPGATSASQDRPQELPFSMY*ASAAAA
Trigger: GGCCGCGGCCGCCGAGGCCAAGTACATCGAGAAGGG...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 90 bp GGGCCTCGGCCTGCGTGGCCAGCGTGGGCAGGGCCACCAGTGGCGTaGTGCCGTCCCCGGAGAAGCACTCATCATCGGCACAGGGCATGT +
Preference number: 5 (lower is better)
Translates to: GPRPAWPAWAGPPVA*CRPRRSTHHRHRAC
Trigger: ACATGCCCTGTGCCGATGATGAGTGCTTCTCCGGGGACGGCACCACGCCACTGGTGGCCCTGCCCACGCTGGCCACGCAGGCCGAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACTGTCCCGGAGGCCACTaGGCCGCCGGCATTCACTCT +
Preference number: 5 (lower is better)
Translates to: RATRGDKRIPGPATGARDCPGGH*AAGIHS
Trigger: AGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACA...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp CCTCGGCCTGCGTGGCCAGCGTGGGCAGGGCCACCAGTGGCGTGGTaGCGTCCCCGGAGAAGCACTCATCATCGGCACAGGGCATGTCAC +
Preference number: 5 (lower is better)
Translates to: PRPAWPAWAGPPVAW*RPRRSTHHRHRACH
Trigger: GTGACATGCCCTGTGCCGATGATGAGTGCTTCTCCGGGGACGGCACCACGCCACTGGTGGCCCTGCCCACGCTGGCCACGCAGGCCGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp CCGAACTCTGGCTGTCGGGGCCCGGCCGGCCCAGCTCACAGTCCCTaGGTTCCGGAGGGTCCCCGGTTCGAACCTCCATGTAGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: PNSGCRGPAGPAHSP*VPEGPRFEPPCSCP
Trigger: AGGGCAGCTACATGGAGGTTCGAACCGGGGACCCTCCGGAACGCAGGGACTGTGAGCTGGGCCGGCCGGGCCCCGACAGCCAGAGTTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGGCTCCGACGTTCCTGTaGTGTGTCAGGGCCCGCCAA +
Preference number: 5 (lower is better)
Translates to: VPPGATSASQDRPQELGTAPTFL*CVRARQ
Trigger: TTGGCGGGCCCTGACACACAACAGGAACGTCGGAGC...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACAGCCACACGAAGCCCTaGTCGCCCTCGATCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RATRGDKRIPGPATGARDSHTKP*SPSISQ
Trigger: CTGGCTGATCGAGGGCGACAAGGGCTTCGTGTGGCT...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACTGCAGCACCTGCAGGTaGAACTGGCCCGAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: RATRGDKRIPGPATGARDCSTCR*NWPEKA
Trigger: CGCCTTCTCGGGCCAGTTCAACCTGCAGGTGCTGCA...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGTGAGCTGCTTGACCTaGATGAGGGGGCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: GHVPPGATSASQDRPQELVSCLT*MRGRAS
Trigger: CGAGGCCCGCCCCCTCATCAAGGTCAAGCAGCTCAC...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCTGGCCGAAGGCGTCCTaGTACCCGGGCGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPWPKAS*YPGARK
Trigger: CTTCCTGGCGCCCGGGTACAAGGACGCCTTCGGCCA...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCCGGGACGTGTCCCCCTaGTCTGTCCCCACTCGCTCC +
Preference number: 5 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPRDVSP*SVPTRS
Trigger: GGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCG...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS TCA 90 bp GCGGCGACTCGCACTGCATGCGGTCGTACGTCTGTGTGGCGTTGGTaGAGGCGGCCAGCCAGCGCAGGAAGCCCAGCAGCTCGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: AATRTACGRTSVWRW*RRPASAGSPAARRS
Trigger: GCTCCTGCGAGCTGCTGGGCTTCCTGCGCTGGCTGGCCGCCTTCACCAACGCCACACAGACGTACGACCGCATGCAGTGCGAGTCGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCAGCCACACGAAGCCCTaGTCGCCCTCGATCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GHVPPGATSASQDRPQELSHTKP*SPSISQ
Trigger: CTGGCTGATCGAGGGCGACAAGGGCTTCGTGTGGCT...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCGCGCTCTCCACCAGCTaGTACTGCTCCACCTCGCCG +
Preference number: 5 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPALSTS*YCSTSP
Trigger: CGGCGAGGTGGAGCAGTACAAGCTGGTGGAGAGCGC...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCTGTCCCGGAGGCCACTaGGCCGCCGGCATTCACTCT +
Preference number: 5 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPCPGGH*AAGIHS
Trigger: AGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACA...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 90 bp ACCAGCGGCGGCTCCGCGACGGACACGGGCCCCGACTTGACGCCCTaGAAGGAGGTGGACTCGGACTTGAGCGCGTCGATGCAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: TSGGSATDTGPDLTP*KEVDSDLSASMQLL
Trigger: CAACAACTGCATCGACGCGCTCAAGTCCGAGTCCACCTCCTTCCAGGGCGTCAAGTCGGGGCCCGTGTCCGTCGCGGAGCCGCCGCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCCGGATACGGTTCTCGTaGAGCCGCAGGTCCACGATG +
Preference number: 5 (lower is better)
Translates to: GHVPPGATSASQDRPQELRIRFS*SRRSTM
Trigger: CATCGTGGACCTGCGGCTCAACGAGAACCGTATCCG...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACTTGAGGTACGTGAGGTaGCCAAAGCGGCTGAGCGAG +
Preference number: 5 (lower is better)
Translates to: RATRGDKRIPGPATGARDLRYVR*PKRLSE
Trigger: CTCGCTCAGCCGCTTTGGCAACCTCACGTACCTCAA...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCTGCAGCACCTGCAGGTaGAACTGGCCCGAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPCSTCR*NWPEKA
Trigger: CGCCTTCTCGGGCCAGTTCAACCTGCAGGTGCTGCA...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACCAGACTGACTGCAGTTaGCTGAGGATGCTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: RATRGDKRIPGPATGARDQTDCS*LRMLRW
Trigger: CCACCGCAGCATCCTCAGCAAACTGCAGTCAGTCTG...GTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGCAGACTGACTGCAGTTaGCTGAGGATGCTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: VPPGATSASQDRPQELGTQTDCS*LRMLRW
Trigger: CCACCGCAGCATCCTCAGCAAACTGCAGTCAGTCTG...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GGACACGTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGAGGTGGACTCGGACTaGAGCGCGTCGATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GHVPPGATSASQDRPQELEVDSD*SASMQL
Trigger: CAACTGCATCGACGCGCTCAAGTCCGAGTCCACCTC...GAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCACGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp GCCAGCGCAGGAAGCCCAGCAGCTCGCAGGAGCAGTAGAAGGGGTTaGTGTAGAGCTCGCACACCGACAGCTTGGCCAGGCCGGCGAAGG +
Preference number: 5 (lower is better)
Translates to: ASAGSPAARRSSRRG*CRARTPTAWPGRRR
Trigger: CCTTCGCCGGCCTGGCCAAGCTGTCGGTGTGCGAGCTCTACAGCAACCCCTTCTACTGCTCCTGCGAGCTGCTGGGCTTCCTGCGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GTGCCACCCGGGGCGACAAGCGCATCCCAGGACCGGCCACAGGAGCTCGGGACGGACACGGTGGAGGCCTaGCTGTTGTTGAAATGCTCC +
Preference number: 5 (lower is better)
Translates to: VPPGATSASQDRPQELGTDTVEA*LLLKCS
Trigger: GGAGCATTTCAACAACAGCAAGGCCTCCACCGTGTC...CGTCCCGAGCTCCTGTGGCCGGTCCTGGGATGCGCTTGTCGCCCCGGGTGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGGTGAGGCAGGTGTGGTaGTGGCGCAGCCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEVRQVW*WRSPAL
Trigger: CAGCGCCGGGCTGCGCCACAACCACACCTGCCTCAC...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGCTGCCCTTGCTGGCCTaGGGGGTGTCCGCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PPLSQLLWWRACVGFGAELPLLA*GVSALS
Trigger: GGAGAGCGCGGACACCCCCAAGGCCAGCAAGGGCAG...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp AGTCCCTGCGTTCCGGAGGGTCCCCGGTTCGAACCTCCATGTAGCTaGCCTTGCTGGCCTTGGGGGTGTCCGCGCTCTCCACCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: SPCVPEGPRFEPPCS*PCWPWGCPRSPPAC
Trigger: ACAAGCTGGTGGAGAGCGCGGACACCCCCAAGGCCAGCAAGGGCAGCTACATGGAGGTTCGAACCGGGGACCCTCCGGAACGCAGGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 90 bp GAGGGTCCCCGGTTCGAACCTCCATGTAGCTGCCCTTGCTGGCCTTaGGGGTGTCCGCGCTCTCCACCAGCTTGTACTGCTCCACCTCGC +
Preference number: 5 (lower is better)
Translates to: EGPRFEPPCSCPCWP*GCPRSPPACTAPPR
Trigger: GCGAGGTGGAGCAGTACAAGCTGGTGGAGAGCGCGGACACCCCCAAGGCCAGCAAGGGCAGCTACATGGAGGTTCGAACCGGGGACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACCGGCCACAGGAGCTCGGGACGTGTCCCCCTTGTCTGTCCCCACTCGCTCCCTCCACGATGGTGCTGTaGATCTGCTGTGGGATGGCC +
Preference number: 5 (lower is better)
Translates to: DRPQELGTCPPCLSPLAPSTMVL*ICCGMA
Trigger: GGCCATCCCACAGCAGATCAACAGCACCATCGTGGA...GGGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCGAGCTCCTGTGGCCGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCTCGCACACCGACAGCTaGGCCAGGCCGGCGAAGGTG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRSHTDS*ARPAKV
Trigger: CACCTTCGCCGGCCTGGCCAAGCTGTCGGTGTGCGA...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGGCCGAGGCGGCCTTCTaGTGCTTCTCCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: PPLSQLLWWRACVGFGAEAEAAF*CFSSWR
Trigger: GCGCCAGGAGGAGAAGCACAAGAAGGCCGCCTCGGC...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCGCCGAGGCGGCCTTCTaGTGCTTCTCCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRAEAAF*CFSSWR
Trigger: GCGCCAGGAGGAGAAGCACAAGAAGGCCGCCTCGGC...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGGACACGGGCCCCGACTaGACGCCCTGGAAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQDTGPD*TPWKEV
Trigger: CACCTCCTTCCAGGGCGTCAAGTCGGGGCCCGTGTC...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCGACACGGGCCCCGACTaGACGCCCTGGAAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRDTGPD*TPWKEV
Trigger: CACCTCCTTCCAGGGCGTCAAGTCGGGGCCCGTGTC...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCTGGCCGAAGGCGTCCTaGTACCCGGGCGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRWPKAS*YPGARK
Trigger: CTTCCTGGCGCCCGGGTACAAGGACGCCTTCGGCCA...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTGATCCTGCATCCTTTTaGGTCCAGTGGGCATCGCCG +
Preference number: 5 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPDPASF*VQWASP
Trigger: CGGCGATGCCCACTGGACCAAAAAGGATGCAGGATC...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GGCTCCAGGACCTGTCCCGGAGGCCACTTGGCCGCCGGCATTCACTCTGCCCCTGTGCGTGTGTTGGGTTaGGTGCTGAGTCTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GSRTCPGGHLAAGIHSAPVRVLG*VLSLWV
Trigger: CACCCAGAGACTCAGCACCAAACCCAACACACGCAC...AGGGGCAGAGTGAATGCCGGCGGCCAAGTGGCCTCCGGGACAGGTCCTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp GTACTTGAGCTCGATGATGGTCTTCTTGAGGCTGCCAGCTGCGGCTaGCGAGGCGGCCTTCTTGTGCTTCTCCTCCTGGCGCCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: VLELDDGLLEAASCG*RGGLLVLLLLAPPP
Trigger: AGGCGGCGGCGCCAGGAGGAGAAGCACAAGAAGGCCGCCTCGGCAGCCGCAGCTGGCAGCCTCAAGAAGACCATCATCGAGCTCAAGTAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp TGGCCCGTACTTGAGCTCGATGATGGTCTTCTTGAGGCTGCCAGCTaGGGCTGCCGAGGCGGCCTTCTTGTGCTTCTCCTCCTGGCGCCG +
Preference number: 5 (lower is better)
Translates to: WPVLELDDGLLEAAS*GCRGGLLVLLLLAP
Trigger: CGGCGCCAGGAGGAGAAGCACAAGAAGGCCGCCTCGGCAGCCGCAGCTGGCAGCCTCAAGAAGACCATCATCGAGCTCAAGTACGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp TGCGTTCCGGAGGGTCCCCGGTTCGAACCTCCATGTAGCTGCCCTTaGTGGCCTTGGGGGTGTCCGCGCTCTCCACCAGCTTGTACTGCT +
Preference number: 5 (lower is better)
Translates to: CVPEGPRFEPPCSCP*WPWGCPRSPPACTA
Trigger: AGCAGTACAAGCTGGTGGAGAGCGCGGACACCCCCAAGGCCAGCAAGGGCAGCTACATGGAGGTTCGAACCGGGGACCCTCCGGAACGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 90 bp GTTCCGGAGGGTCCCCGGTTCGAACCTCCATGTAGCTGCCCTTGCTaGCCTTGGGGGTGTCCGCGCTCTCCACCAGCTTGTACTGCTCCA +
Preference number: 5 (lower is better)
Translates to: VPEGPRFEPPCSCPC*PWGCPRSPPACTAP
Trigger: TGGAGCAGTACAAGCTGGTGGAGAGCGCGGACACCCCCAAGGCCAGCAAGGGCAGCTACATGGAGGTTCGAACCGGGGACCCTCCGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCGCGCTCTCCACCAGCTaGTACTGCTCCACCTCGCCG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRALSTS*YCSTSP
Trigger: CGGCGAGGTGGAGCAGTACAAGCTGGTGGAGAGCGC...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCGCGAAGGTGCCGCTGTaGAGCTGCTGGATGCGGTTC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRAKVPL*SCWMRF
Trigger: GAACCGCATCCAGCAGCTCAACAGCGGCACCTTCGC...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGCCAGGAAGCCGTGCTaGGCGGCCAGCGGCTCGGAC +
Preference number: 5 (lower is better)
Translates to: GGNEETDWTENPQKTTDRARKPC*AASGSD
Trigger: GTCCGAGCCGCTGGCCGCCAAGCACGGCTTCCTGGC...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCTCCAGGATGGACGCCTaGCGCCCCAGGCCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGSRMDA*RPRPSC
Trigger: GCACGAGGGCCTGGGGCGCAAGGCGTCCATCCTGGA...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCAACTCCTCTTCCTCCTaGTGCCGCCGGCGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRNSSSS*CRRRLS
Trigger: ACTGAGCCGCCGGCGGCACAAGGAGGAAGAGGAGTT...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CCCCCGCTGTCACAGTTGCTGTGGTGGCGTGCGTGTGTTGGGTTTGGTGCTGAGAACTCCTCTTCCTCCTaGTGCCGCCGGCGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: PPLSQLLWWRACVGFGAENSSSS*CRRRLS
Trigger: ACTGAGCCGCCGGCGGCACAAGGAGGAAGAGGAGTT...CTCAGCACCAAACCCAACACACGCACGCCACCACAGCAACTGTGACAGCGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS TCA 90 bp CCTGGGCCTTGGTCAGCCTGGACACGGTGGAGGCCTTGCTGTTGTTaGAATGCTCCAGGGTGTACATCCGGTGGAACGGGCTGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: PGPWSAWTRWRPCCC*NAPGCTSGGTGWAA
Trigger: AGCTGCCCAGCCCGTTCCACCGGATGTACACCCTGGAGCATTTCAACAACAGCAAGGCCTCCACCGTGTCCAGGCTGACCAAGGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 90 bp GCCTTGGTCAGCCTGGACACGGTGGAGGCCTTGCTGTTGTTGAAATaGTCCAGGGTGTACATCCGGTGGAACGGGCTGGGCAGCTGGACG +
Preference number: 5 (lower is better)
Translates to: ALVSLDTVEALLLLK*SRVYIRWNGLGSWT
Trigger: CGTCCAGCTGCCCAGCCCGTTCCACCGGATGTACACCCTGGAGCATTTCAACAACAGCAAGGCCTCCACCGTGTCCAGGCTGACCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCTCGCACACCGACAGCTaGGCCAGGCCGGCGAAGGTG +
Preference number: 5 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGSHTDS*ARPAKV
Trigger: CACCTTCGCCGGCCTGGCCAAGCTGTCGGTGTGCGA...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATCCCCCCGCTGTCACAGTaGCTGTGGTGGCGTGCGTGT +
Preference number: 5 (lower is better)
Translates to: PLQWTPEAAMKRRTGQRIPPLSQ*LWWRAC
Trigger: ACACGCACGCCACCACAGCAACTGTGACAGCGGGGG...GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATCTACAGGTACTCCAGCTaGCCCAGGCCGCGCAGCATG +
Preference number: 5 (lower is better)
Translates to: PLQWTPEAAMKRRTGQRIYRYSS*PRPRSM
Trigger: CATGCTGCGCGGCCTGGGCAAGCTGGAGTACCTGTA...GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCGTGAGCGTGAACAGGTaGGTCAGACGGATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRVSVNR*VRRISS
Trigger: GGAGGAGATCCGTCTGACCAACCTGTTCACGCTCAC...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCTCGATGATGGTCTTCTaGAGGCTGCCAGCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRSMMVF*RLPAAA
Trigger: AGCCGCAGCTGGCAGCCTCAAGAAGACCATCATCGA...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGCTGCCCTTGCTGGCCTaGGGGGTGTCCGCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITLPLLA*GVSALS
Trigger: GGAGAGCGCGGACACCCCCAAGGCCAGCAAGGGCAG...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCCCCCCGCTGTCACAGTaGCTGTGGTGGCGTGCGTGT +
Preference number: 5 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGPPLSQ*LWWRAC
Trigger: ACACGCACGCCACCACAGCAACTGTGACAGCGGGGG...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCGCGAAGGTGCCGCTGTaGAGCTGCTGGATGCGGTTC +
Preference number: 5 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGAKVPL*SCWMRF
Trigger: GAACCGCATCCAGCAGCTCAACAGCGGCACCTTCGC...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCTACGTCTGTGTGGCGTaGGTGAAGGCGGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGYVCVA*VKAASQ
Trigger: CTGGCTGGCCGCCTTCACCAACGCCACACAGACGTA...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGGTGGAGGCCTTGCTGTaGTTGAAATGCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: CPSAVDSGGGNEETDWTEVEALL*LKCSRV
Trigger: CACCCTGGAGCATTTCAACAACAGCAAGGCCTCCAC...CTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCGTGGAGGCCTTGCTGTaGTTGAAATGCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVWTRATRGDKRVEALL*LKCSRV
Trigger: CACCCTGGAGCATTTCAACAACAGCAAGGCCTCCAC...GCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGCGGGACGTGTCCCCCTaGTCTGTCCCCACTCGCTCC +
Preference number: 5 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITRDVSP*SVPTRS
Trigger: GGAGCGAGTGGGGACAGACAAGGGGGACACGTCCCG...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 90 bp GTGTCAGGGCCCGCCAACGACCTGATGCACCAGCGAGGAATAGGCTaGAGGATTCCTCCCTGCTGGGCTCAAAGACATGTTCGCCTCATT +
Preference number: 5 (lower is better)
Translates to: VSGPANDLMHQRGIG*RIPPCWAQRHVRLI
Trigger: AATGAGGCGAACATGTCTTTGAGCCCAGCAGGGAGGAATCCTCCAGCCTATTCCTCGCTGGTGCATCAGGTCGTTGGCGGGCCCTGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424383.4
CDS-3UTR CAA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCCGGATACGGTTCTCGTaGAGCCGCAGGTCCACGATG +
Preference number: 5 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGRIRFS*SRRSTM
Trigger: CATCGTGGACCTGCGGCTCAACGAGAACCGTATCCG...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGTCGATGTTGACGATGTaGGGACACTCCCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQSMLTM*GHSQKL
Trigger: CAGCTTCTGGGAGTGTCCCAACATCGTCAACATCGA...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGATACGTCTGTGTGGCGTaGGTGAAGGCGGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GGNEETDWTENPQKTTDRYVCVA*VKAASQ
Trigger: CTGGCTGGCCGCCTTCACCAACGCCACACAGACGTA...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TCTGCCCCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGGAGGCCTTGCTGTTGTaGAAATGCTCCAGGGTGTAC +
Preference number: 5 (lower is better)
Translates to: SAPLQWTPEAAMKRRTGQEALLL*KCSRVY
Trigger: GTACACCCTGGAGCATTTCAACAACAGCAAGGCCTC...CTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGGACACGTGCCACCCGGGGCGACAAGCGCATGACACGGTGGAGGCCTaGCTGTTGTTGAAATGCTCC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVDTCHPGRQAHDTVEA*LLLKCS
Trigger: GGAGCATTTCAACAACAGCAAGGCCTCCACCGTGTC...ATGCGCTTGTCGCCCCGGGTGGCACGTGTCCACACACACACACACACACACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGCTCCGACGTTCCTGTaGTGTGTCAGGGCCCGCCAA +
Preference number: 5 (lower is better)
Translates to: EETDWTENPQKTTDRGDHAPTFL*CVRARQ
Trigger: TTGGCGGGCCCTGACACACAACAGGAACGTCGGAGC...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCTTGAGGTACGTGAGGTaGCCAAAGCGGCTGAGCGAG +
Preference number: 5 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGLRYVR*PKRLSE
Trigger: CTCGCTCAGCCGCTTTGGCAACCTCACGTACCTCAA...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACTACAGGTACTCCAGCTaGCCCAGGCCGCGCAGCATG +
Preference number: 5 (lower is better)
Translates to: EETDWTENPQKTTDRGDHYRYSS*PRPRSM
Trigger: CATGCTGCGCGGCCTGGGCAAGCTGGAGTACCTGTA...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCTCGATGATGGTCTTCTaGAGGCTGCCAGCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGSMMVF*RLPAAA
Trigger: AGCCGCAGCTGGCAGCCTCAAGAAGACCATCATCGA...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp CCTCTGCAGTGGACTCCGGAGGCGGCAATGAAGAGACGGACTGGACAGAGAATCAGCTCTGGCCCGTACTaGAGCTCGATGATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PLQWTPEAAMKRRTGQRISSGPY*SSMMVF
Trigger: GAAGACCATCATCGAGCTCAAGTACGGGCCAGAGCT...GATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCCTCCGGAGTCCACTGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGAGGTGGACTCGGACTaGAGCGCGTCGATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GGNEETDWTENPQKTTDREVDSD*SASMQL
Trigger: CAACTGCATCGACGCGCTCAAGTCCGAGTCCACCTC...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGTGCGTGTGTTGGGTTaGGTGCTGAGTCTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GGNEETDWTENPQKTTDRVRVLG*VLSLWV
Trigger: CACCCAGAGACTCAGCACCAAACCCAACACACGCAC...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACACCACCTCGATGAGGTaGGCCTGCAGGTACAGGTAC +
Preference number: 5 (lower is better)
Translates to: EETDWTENPQKTTDRGDHTTSMR*ACRYRY
Trigger: GTACCTGTACCTGCAGGCCAACCTCATCGAGGTGGT...GTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGTGAGGGGCATGGACAGGTCGATGTaGACGATGTTGGGACACTCC +
Preference number: 5 (lower is better)
Translates to: DWTENPQKTTDRGDHVRGMDRSM*TMLGHS
Trigger: GGAGTGTCCCAACATCGTCAACATCGACCTGTCCAT...GCCCCTCACGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGGATCCTGCATCCTTTTaGGTCCAGTGGGCATCGCCG +
Preference number: 5 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITDPASF*VQWASP
Trigger: CGGCGATGCCCACTGGACCAAAAAGGATGCAGGATC...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp GGCGGCAATGAAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAATGGACAGGTCGATGTaGACGATGTTGGGACACTCC +
Preference number: 5 (lower is better)
Translates to: GGNEETDWTENPQKTTDRMDRSM*TMLGHS
Trigger: GGAGTGTCCCAACATCGTCAACATCGACCTGTCCAT...TCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTTCATTGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGAGCTCTGGCCCGTACTaGAGCTCGATGATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITSSGPY*SSMMVF
Trigger: GAAGACCATCATCGAGCTCAAGTACGGGCCAGAGCT...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS-3UTR CAA 90 bp AAGAGACGGACTGGACAGAGAATCCACAGAAAACCACGGACCGAGGAGATCACGGAGGCCTTGCTGTTGTaGAAATGCTCCAGGGTGTAC +
Preference number: 5 (lower is better)
Translates to: KRRTGQRIHRKPRTEEITEALLL*KCSRVY
Trigger: GTACACCCTGGAGCATTTCAACAACAGCAAGGCCTC...CGTGATCTCCTCGGTCCGTGGTTTTCTGTGGATTCTCTGTCCAGTCCGTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp CGCGGGGGCTGCGCACGGAGCCGCTGGACGAGGTGCTaGCACGAGGGGGCCCGGCGGCCTCCACGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: RGGCARSRWTRC*HEGARRPPRCG
Trigger: ACCACAGCGTGGAGGCCGCCGGGCCCCCTCGTGCCAGCACCTCGTCCAGCGGCTCCGTGCGCAGCCCCCGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp GGCTCGGCCGGGTGGGAGCCGGGGTACGAGTGCCGGTaGTCGCCGTACTGGCGACCCTTCTCGGCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: GSAGWEPGYECR*SPYWRPFSASA
Trigger: GGCCGAGGCCGAGAAGGGTCGCCAGTACGGCGAGCACCGGCACTCGTACCCCGGCTCCCACCCGGCCGAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp CGAGTAGGCGAGGTCGCGGGGCCGCGGCCGGGTGAGTaGCTCCAGGATGGACGCCTTGCGCCCCAGGCCCTC +
Preference number: 6 (lower is better)
Translates to: RVGEVAGPRPGE*LQDGRLAPQAL
Trigger: GAGGGCCTGGGGCGCAAGGCGTCCATCCTGGAGCCACTCACCCGGCCGCGGCCCCGCGACCTCGCCTACTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp ACTGCTCCACCTCGCCGGCCGCAGGCAGGTAAGGGATaGGCGTCACGGCCTCGGGGCCCAGCAGCGGGCCCT +
Preference number: 6 (lower is better)
Translates to: TAPPRRPQAGKG*ASRPRGPAAGP
Trigger: AGGGCCCGCTGCTGGGCCCCGAGGCCGTGACGCGCATCCCTTACCTGCCTGCGGCCGGCGAGGTGGAGCAGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp TGGGAGCCGGGGTACGAGTGCCGGTGCTCGCCGTACTaGCGACCCTTCTCGGCCTCGGCCCGCAGCACGGCG +
Preference number: 6 (lower is better)
Translates to: WEPGYECRCSPY*RPFSASARSTA
Trigger: CGCCGTGCTGCGGGCCGAGGCCGAGAAGGGTCGCCAGTACGGCGAGCACCGGCACTCGTACCCCGGCTCCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 90 bp CTGTGGCCGAAGGCGTCCTTGTACCCGGGCGCCAGGAAGCCGTGCTaGGCGGCCAGCGGCTCGGACAGCAGCACCAGCGGCGGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: LWPKASLYPGARKPC*AASGSDSSTSGGSA
Trigger: CGCGGAGCCGCCGCTGGTGCTGCTGTCCGAGCCGCTGGCCGCCAAGCACGGCTTCCTGGCGCCCGGGTACAAGGACGCCTTCGGCCACAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp TTCTCGATGTACTTGGCCTCGGCGGCCGCGGCCTTGTaGACCCCGACGGCCTCGGCTCGGAAGGCGCGGGGG +
Preference number: 6 (lower is better)
Translates to: FSMYLASAAAAL*TPTASARKARG
Trigger: CCCCCGCGCCTTCCGAGCCGAGGCCGTCGGGGTGCACAAGGCCGCGGCCGCCGAGGCCAAGTACATCGAGAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp CCGGCGGCCTCCACGCTGTGGTGCCGCTGCAGGCTGTaGCCGAAGGCGTCCTTGTACCCGGGCGCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: PAASTLWCRCRL*PKASLYPGARK
Trigger: CTTCCTGGCGCCCGGGTACAAGGACGCCTTCGGCCACAGCCTGCAGCGGCACCACAGCGTGGAGGCCGCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 90 bp GCCTCCACGCTGTGGTGCCGCTGCAGGCTGTGGCCGAAGGCGTCCTaGTACCCGGGCGCCAGGAAGCCGTGCTTGGCGGCCAGCGGCTCG +
Preference number: 6 (lower is better)
Translates to: ASTLWCRCRLWPKAS*YPGARKPCLAASGS
Trigger: CGAGCCGCTGGCCGCCAAGCACGGCTTCCTGGCGCCCGGGTACAAGGACGCCTTCGGCCACAGCCTGCAGCGGCACCACAGCGTGGAGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp CACGAAGCCCTTGTCGCCCTCGATCAGCCAGCAGTCTaGGCGGGCCAGGCCGCCAGCGTGCAGCAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: HEALVALDQPAV*AGQAASVQQGG
Trigger: GCCACCCTGCTGCACGCTGGCGGCCTGGCCCGCGCAGACTGCTGGCTGATCGAGGGCGACAAGGGCTTCGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp GGCTGTCGGGGCCCGGCCGGCCCAGCTCACAGTCCCTaGGTTCCGGAGGGTCCCCGGTTCGAACCTCCATGT +
Preference number: 6 (lower is better)
Translates to: GCRGPAGPAHSP*VPEGPRFEPPC
Trigger: ACATGGAGGTTCGAACCGGGGACCCTCCGGAACGCAGGGACTGTGAGCTGGGCCGGCCGGGCCCCGACAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp CCGAAGGCGTCCTTGTACCCGGGCGCCAGGAAGCCGTaGTTGGCGGCCAGCGGCTCGGACAGCAGCACCAGC +
Preference number: 6 (lower is better)
Translates to: PKASLYPGARKP*LAASGSDSSTS
Trigger: GCTGGTGCTGCTGTCCGAGCCGCTGGCCGCCAAGCACGGCTTCCTGGCGCCCGGGTACAAGGACGCCTTCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp GCCTGCACTCTCAGGGGTGTCCTGTCCCAAACCGCATaGCCGCGCGACGTAAGCGCGGGGAGGGAGGGCGCC +
Preference number: 6 (lower is better)
Translates to: ACTLRGVLSQTA*PRDVSAGREGA
Trigger: GGCGCCCTCCCTCCCCGCGCTTACGTCGCGCGGCCATGCGGTTTGGGACAGGACACCCCTGAGAGTGCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 72 bp AAGGCGTCCTTGTACCCGGGCGCCAGGAAGCCGTGCTaGGCGGCCAGCGGCTCGGACAGCAGCACCAGCGGC +
Preference number: 6 (lower is better)
Translates to: KASLYPGARKPC*AASGSDSSTSG
Trigger: GCCGCTGGTGCTGCTGTCCGAGCCGCTGGCCGCCAAGCACGGCTTCCTGGCGCCCGGGTACAAGGACGCCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 72 bp CTGTGGTGCCGCTGCAGGCTGTGGCCGAAGGCGTCCTaGTACCCGGGCGCCAGGAAGCCGTGCTTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: LWCRCRLWPKAS*YPGARKPCLAA
Trigger: GGCCGCCAAGCACGGCTTCCTGGCGCCCGGGTACAAGGACGCCTTCGGCCACAGCCTGCAGCGGCACCACAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp CCTGCGTGGCCAGCGTGGGCAGGGCCACCAGTGGCGTaGTGCCGTCCCCGGAGAAGCACTCATCATCGGCAC +
Preference number: 6 (lower is better)
Translates to: PAWPAWAGPPVA*CRPRRSTHHRH
Trigger: GTGCCGATGATGAGTGCTTCTCCGGGGACGGCACCACGCCACTGGTGGCCCTGCCCACGCTGGCCACGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp CTCGGCCTGCGTGGCCAGCGTGGGCAGGGCCACCAGTaGCGTGGTGCCGTCCCCGGAGAAGCACTCATCATC +
Preference number: 6 (lower is better)
Translates to: LGLRGQRGQGHQ*RGAVPGEALII
Trigger: GATGATGAGTGCTTCTCCGGGGACGGCACCACGCCACTGGTGGCCCTGCCCACGCTGGCCACGCAGGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp CTGGGCAGCCGGGGCAAGCAGATGGTGAGGCAGGTGTaGTTGTGGCGCAGCCCGGCGCTGGTGGACACCACG +
Preference number: 6 (lower is better)
Translates to: LGSRGKQMVRQV*LWRSPALVDTT
Trigger: CGTGGTGTCCACCAGCGCCGGGCTGCGCCACAACCACACCTGCCTCACCATCTGCTTGCCCCGGCTGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 90 bp GACAGCAGCACCAGCGGCGGCTCCGCGACGGACACGGGCCCCGACTaGACGCCCTGGAAGGAGGTGGACTCGGACTTGAGCGCGTCGATG +
Preference number: 6 (lower is better)
Translates to: DSSTSGGSATDTGPD*TPWKEVDSDLSASM
Trigger: CATCGACGCGCTCAAGTCCGAGTCCACCTCCTTCCAGGGCGTCAAGTCGGGGCCCGTGTCCGTCGCGGAGCCGCCGCTGGTGCTGCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 90 bp ACGGGCGGCGACTCGCACTGCATGCGGTCGTACGTCTGTGTGGCGTaGGTGAAGGCGGCCAGCCAGCGCAGGAAGCCCAGCAGCTCGCAG +
Preference number: 6 (lower is better)
Translates to: TGGDSHCMRSYVCVA*VKAASQRRKPSSSQ
Trigger: CTGCGAGCTGCTGGGCTTCCTGCGCTGGCTGGCCGCCTTCACCAACGCCACACAGACGTACGACCGCATGCAGTGCGAGTCGCCGCCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 90 bp TGGGACAGCGGGGCCAGGCCGGGCGCCTCCAGCTCTGGCCCGTACTaGAGCTCGATGATGGTCTTCTTGAGGCTGCCAGCTGCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: WDSGARPGASSSGPY*SSMMVFLRLPAAAA
Trigger: GGCAGCCGCAGCTGGCAGCCTCAAGAAGACCATCATCGAGCTCAAGTACGGGCCAGAGCTGGAGGCGCCCGGCCTGGCCCCGCTGTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp GGCTCCGCGACGGACACGGGCCCCGACTTGACGCCCTaGAAGGAGGTGGACTCGGACTTGAGCGCGTCGATG +
Preference number: 6 (lower is better)
Translates to: GSATDTGPDLTP*KEVDSDLSASM
Trigger: CATCGACGCGCTCAAGTCCGAGTCCACCTCCTTCCAGGGCGTCAAGTCGGGGCCCGTGTCCGTCGCGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS TCA 72 bp CGTACGAGTCCTCGGTGCAGACTGACTGCAGTTTGCTaGGGATGCTGCGGTGGCCGCGGCGGCCCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: RTSPRCRLTAVC*GCCGGRGGPGP
Trigger: TGGGCCAGGGCCGCCGCGGCCACCGCAGCATCCTCAGCAAACTGCAGTCAGTCTGCACCGAGGACTCGTACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp ACCTCAGCCGCGTACGAGTCCTCGGTGCAGACTGACTaGAGTTTGCTGAGGATGCTGCGGTGGCCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: TSAAYESSVQTD*SLLRMLRWPRR
Trigger: CCGCCGCGGCCACCGCAGCATCCTCAGCAAACTGCAGTCAGTCTGCACCGAGGACTCGTACGCGGCTGAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp GAGGGTCCCCGGTTCGAACCTCCATGTAGCTGCCCTTaGTGGCCTTGGGGGTGTCCGCGCTCTCCACCAGCT +
Preference number: 6 (lower is better)
Translates to: EGPRFEPPCSCP*WPWGCPRSPPA
Trigger: AGCTGGTGGAGAGCGCGGACACCCCCAAGGCCAGCAAGGGCAGCTACATGGAGGTTCGAACCGGGGACCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp GTTCCGGAGGGTCCCCGGTTCGAACCTCCATGTAGCTaGCCTTGCTGGCCTTGGGGGTGTCCGCGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: VPEGPRFEPPCS*PCWPWGCPRSP
Trigger: TGGAGAGCGCGGACACCCCCAAGGCCAGCAAGGGCAGCTACATGGAGGTTCGAACCGGGGACCCTCCGGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 72 bp GACTCGCACTGCATGCGGTCGTACGTCTGTGTGGCGTaGGTGAAGGCGGCCAGCCAGCGCAGGAAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: DSHCMRSYVCVA*VKAASQRRKPS
Trigger: GCTGGGCTTCCTGCGCTGGCTGGCCGCCTTCACCAACGCCACACAGACGTACGACCGCATGCAGTGCGAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 72 bp GGGGCCAGGCCGGGCGCCTCCAGCTCTGGCCCGTACTaGAGCTCGATGATGGTCTTCTTGAGGCTGCCAGCT +
Preference number: 6 (lower is better)
Translates to: GARPGASSSGPY*SSMMVFLRLPA
Trigger: AGCTGGCAGCCTCAAGAAGACCATCATCGAGCTCAAGTACGGGCCAGAGCTGGAGGCGCCCGGCCTGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS TCA 72 bp GACCACCTCAGCCGCGTACGAGTCCTCGGTGCAGACTaGCTGCAGTTTGCTGAGGATGCTGCGGTGGCCGCG +
Preference number: 6 (lower is better)
Translates to: DHLSRVRVLGAD*LQFAEDAAVAA
Trigger: CGCGGCCACCGCAGCATCCTCAGCAAACTGCAGTCAGTCTGCACCGAGGACTCGTACGCGGCTGAGGTGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp GGGCCTGGGTGTCCTGATGGCTCCACTGACTCCTCCTaGTCCGACGTTCCTGTTGTGTGTCAGGGCCCGCCA +
Preference number: 6 (lower is better)
Translates to: GPGCPDGSTDSS*SDVPVVCQGPP
Trigger: TGGCGGGCCCTGACACACAACAGGAACGTCGGAGCAGGAGGAGTCAGTGGAGCCATCAGGACACCCAGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp AGATGCTCTGGGAGGCCCGGCAGGTGTACTCGGGGCTaGAGGAGTAGCTCAGGCTGTGGTACTGCGGGGACA +
Preference number: 6 (lower is better)
Translates to: RCSGRPGRCTRG*RSSSGCGTAGT
Trigger: TGTCCCCGCAGTACCACAGCCTGAGCTACTCCTCCAGCCCCGAGTACACCTGCCGGGCCTCCCAGAGCATCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 90 bp GGCGCCTCCAGCTCTGGCCCGTACTTGAGCTCGATGATGGTCTTCTaGAGGCTGCCAGCTGCGGCTGCCGAGGCGGCCTTCTTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: GASSSGPYLSSMMVF*RLPAAAAEAAFLCF
Trigger: GAAGCACAAGAAGGCCGCCTCGGCAGCCGCAGCTGGCAGCCTCAAGAAGACCATCATCGAGCTCAAGTACGGGCCAGAGCTGGAGGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp GGAAGCCCAGCAGCTCGCAGGAGCAGTAGAAGGGGTTaGTGTAGAGCTCGCACACCGACAGCTTGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: GSPAARRSSRRG*CRARTPTAWPG
Trigger: GCCTGGCCAAGCTGTCGGTGTGCGAGCTCTACAGCAACCCCTTCTACTGCTCCTGCGAGCTGCTGGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp CTCGATGATGGTCTTCTTGAGGCTGCCAGCTGCGGCTaGCGAGGCGGCCTTCTTGTGCTTCTCCTCCTGGCG +
Preference number: 6 (lower is better)
Translates to: LDDGLLEAASCG*RGGLLVLLLLA
Trigger: CGCCAGGAGGAGAAGCACAAGAAGGCCGCCTCGGCAGCCGCAGCTGGCAGCCTCAAGAAGACCATCATCGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 72 bp AGCTCTGGCCCGTACTTGAGCTCGATGATGGTCTTCTaGAGGCTGCCAGCTGCGGCTGCCGAGGCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SSGPYLSSMMVF*RLPAAAAEAAF
Trigger: GAAGGCCGCCTCGGCAGCCGCAGCTGGCAGCCTCAAGAAGACCATCATCGAGCTCAAGTACGGGCCAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 90 bp TCCTGGGCCTTGGTCAGCCTGGACACGGTGGAGGCCTTGCTGTTGTaGAAATGCTCCAGGGTGTACATCCGGTGGAACGGGCTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SWALVSLDTVEALLL*KCSRVYIRWNGLGS
Trigger: GCTGCCCAGCCCGTTCCACCGGATGTACACCCTGGAGCATTTCAACAACAGCAAGGCCTCCACCGTGTCCAGGCTGACCAAGGCCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 90 bp TCCTCCTGGGCCTTGGTCAGCCTGGACACGGTGGAGGCCTTGCTGTaGTTGAAATGCTCCAGGGTGTACATCCGGTGGAACGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SSWALVSLDTVEALL*LKCSRVYIRWNGLG
Trigger: GCCCAGCCCGTTCCACCGGATGTACACCCTGGAGCATTTCAACAACAGCAAGGCCTCCACCGTGTCCAGGCTGACCAAGGCCCAGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp GTGAGCGTGAACAGGTTGGTCAGACGGATCTCCTCCTaGGCCTTGGTCAGCCTGGACACGGTGGAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: VSVNRLVRRISS*ALVSLDTVEAL
Trigger: CAAGGCCTCCACCGTGTCCAGGCTGACCAAGGCCCAGGAGGAGATCCGTCTGACCAACCTGTTCACGCTCAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp CGGTTCGAACCTCCATGTAGCTGCCCTTGCTGGCCTTaGGGGTGTCCGCGCTCTCCACCAGCTTGTACTGCT +
Preference number: 6 (lower is better)
Translates to: RFEPPCSCPCWP*GCPRSPPACTA
Trigger: AGCAGTACAAGCTGGTGGAGAGCGCGGACACCCCCAAGGCCAGCAAGGGCAGCTACATGGAGGTTCGAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp AGCCTGGACACGGTGGAGGCCTTGCTGTTGTTGAAATaGTCCAGGGTGTACATCCGGTGGAACGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SLDTVEALLLLK*SRVYIRWNGLG
Trigger: GCCCAGCCCGTTCCACCGGATGTACACCCTGGAGCATTTCAACAACAGCAAGGCCTCCACCGTGTCCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp CTTGAGCTCGATGATGGTCTTCTTGAGGCTGCCAGCTaGGGCTGCCGAGGCGGCCTTCTTGTGCTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: LELDDGLLEAAS*GCRGGLLVLLL
Trigger: GAGGAGAAGCACAAGAAGGCCGCCTCGGCAGCCGCAGCTGGCAGCCTCAAGAAGACCATCATCGAGCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 90 bp TTGGTGAGCGTGAACAGGTTGGTCAGACGGATCTCCTCCTGGGCCTaGGTCAGCCTGGACACGGTGGAGGCCTTGCTGTTGTTGAAATGC +
Preference number: 6 (lower is better)
Translates to: LVSVNRLVRRISSWA*VSLDTVEALLLLKC
Trigger: GCATTTCAACAACAGCAAGGCCTCCACCGTGTCCAGGCTGACCAAGGCCCAGGAGGAGATCCGTCTGACCAACCTGTTCACGCTCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CCA 72 bp CCCGCCAACGACCTGATGCACCAGCGAGGAATAGGCTaGAGGATTCCTCCCTGCTGGGCTCAAAGACATGTT +
Preference number: 6 (lower is better)
Translates to: PANDLMHQRGIG*RIPPCWAQRHV
Trigger: AACATGTCTTTGAGCCCAGCAGGGAGGAATCCTCCAGCCTATTCCTCGCTGGTGCATCAGGTCGTTGGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 72 bp TTGGTCAGCCTGGACACGGTGGAGGCCTTGCTGTTGTaGAAATGCTCCAGGGTGTACATCCGGTGGAACGGG +
Preference number: 6 (lower is better)
Translates to: LVSLDTVEALLL*KCSRVYIRWNG
Trigger: CCCGTTCCACCGGATGTACACCCTGGAGCATTTCAACAACAGCAAGGCCTCCACCGTGTCCAGGCTGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 72 bp GCCTTGGTCAGCCTGGACACGGTGGAGGCCTTGCTGTaGTTGAAATGCTCCAGGGTGTACATCCGGTGGAAC +
Preference number: 6 (lower is better)
Translates to: ALVSLDTVEALL*LKCSRVYIRWN
Trigger: GTTCCACCGGATGTACACCCTGGAGCATTTCAACAACAGCAAGGCCTCCACCGTGTCCAGGCTGACCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS CAA 72 bp TTGAGCTGCTGGATGCGGTTCATGGACAGGTCGATGTaGACGATGTTGGGACACTCCCAGAAGCTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: LSCWMRFMDRSM*TMLGHSQKLLA
Trigger: GGCCAGCAGCTTCTGGGAGTGTCCCAACATCGTCAACATCGACCTGTCCATGAACCGCATCCAGCAGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424383.4
ENST00000561626.3
CDS GCA 72 bp ATGCACCAGCGAGGAATAGGCTGGAGGATTCCTCCCTaGTGGGCTCAAAGACATGTTCGCCTCATTCCAGCA +
Preference number: 6 (lower is better)
Translates to: MHQRGIGWRIPP*WAQRHVRLIPA
Trigger: TGCTGGAATGAGGCGAACATGTCTTTGAGCCCAGCAGGGAGGAATCCTCCAGCCTATTCCTCGCTGGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424383.4