RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000102034

Ensembl transcript IDs: ENST00000308167.10, ENST00000335997.11, ENST00000434609.1, ENST00000615377.4

Found 726 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGCAGTCATCACAGAGGCAGGCTGGTCCGCCTTCGAGGTGAGTTaGAGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGC +
Preference number: 1 (lower is better)
Translates to: AAVITEAGWSAFEVS*RQAEQQKPCGRCPC
Trigger: GCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGATGACTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 90 bp GGGAAGCAGGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTaGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGT +
Preference number: 1 (lower is better)
Translates to: GKQGATKRERCHGNS*LPTPVFLVKESGLG
Trigger: ACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCCTGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR TCA 90 bp CAGGAAGAGTACCTTGGTCCAGCCAGTGAGGGCTGCTCCCAGAGCTaGCTTCCCTTCCCTCCCTTCGTGGTTTTACCCCACTCGGCCTTT +
Preference number: 1 (lower is better)
Translates to: QEEYLGPASEGCSQS*LPFPPFVVLPHSAF
Trigger: AAAGGCCGAGTGGGGTAAAACCACGAAGGGAGGGAAGGGAAGTCAGCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGGTACTCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 90 bp TTGGTACACCCAAGGAGGTCTGCTGCAGTCATCACAGAGGCAGGCTaGTCCGCCTTCGAGGTGAGTTGCAGGCAGGCTGAGCAGCAGAAA +
Preference number: 1 (lower is better)
Translates to: LVHPRRSAAVITEAG*SAFEVSCRQAEQQK
Trigger: TTTCTGCTGCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGATGACTGCAGCAGACCTCCTTGGGTGTACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR TCA 90 bp AGTCTGATGCCAGGGATGCTTAAGCTGGGCACTGTTTGGCCACAGTaGCACCAGGCAGGGCCGGGGGACTTGGGGTCAAGTGTATTGACA +
Preference number: 1 (lower is better)
Translates to: SLMPGMLKLGTVWPQ*HQAGPGDLGSSVLT
Trigger: TGTCAATACACTTGACCCCAAGTCCCCCGGCCCTGCCTGGTGTCACTGTGGCCAAACAGTGCCCAGCTTAAGCATCCCTGGCATCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR GCA 90 bp CCCCACTCGGCCTTTGTGTCCCTGAGGAGCGCATCTTCCCCAATGTaGATGCGCATCAAAGCGTTCCTACTCTGCACTCGTTCCAGCTCT +
Preference number: 1 (lower is better)
Translates to: PHSAFVSLRSASSPM*MRIKAFLLCTRSSS
Trigger: AGAGCTGGAACGAGTGCAGAGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGACACAAAGGCCGAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 90 bp GTGAAGGAGTCAGGGTTAGGTGTGAAAGTGGGAGATGAGGGGCATTaGTACACCCAAGGAGGTCTGCTGCAGTCATCACAGAGGCAGGCT +
Preference number: 1 (lower is better)
Translates to: VKESGLGVKVGDEGH*YTQGGLLQSSQRQA
Trigger: AGCCTGCCTCTGTGATGACTGCAGCAGACCTCCTTGGGTGTACCAATGCCCCTCATCTCCCACTTTCACACCTAACCCTGACTCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR TCA 90 bp GCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTaGCTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGG +
Preference number: 1 (lower is better)
Translates to: AKHFGVAQDSSLTAR*LWLLTRQTPGRVPW
Trigger: CCAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 90 bp GAGCCAGGTAGAAGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTaGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTCCATCAC +
Preference number: 1 (lower is better)
Translates to: EPGRRALLTKLLHKP*PQTSAWLKAFSLHH
Trigger: GTGATGGAGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCTTCTACCTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 90 bp CTGGAGGGCACTTCATCCCCGTCTAAATCCTTCAGCAAAGCACTTTaGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTT +
Preference number: 1 (lower is better)
Translates to: LEGTSSPSKSFSKAL*GGPRFQPDCKVTVV
Trigger: AACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAAGGATTTAGACGGGGATGAAGTGCCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR TCA 90 bp CGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTGAAAGTGGGAGATaGGGGGCATTGGTACACCCAAGGAGGTCTGCTGCAGTCATCACA +
Preference number: 1 (lower is better)
Translates to: RLLGEGVRVRCESGR*GALVHPRRSAAVIT
Trigger: TGTGATGACTGCAGCAGACCTCCTTGGGTGTACCAATGCCCCTCATCTCCCACTTTCACACCTAACCCTGACTCCTTCACCAAGAAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR GCA 90 bp TCCTTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTaGAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGT +
Preference number: 1 (lower is better)
Translates to: SFSKALWGGPRFQPD*KVTVVANTANSRKS
Trigger: ACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 90 bp AGCCCTAGGCACAAATACTCAATGAATTCAGCTCTGGGGGCTTTGTaGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAATCC +
Preference number: 1 (lower is better)
Translates to: SPRHKYSMNSALGAL*LALRLEGTSSPSKS
Trigger: GGATTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCACAAAGCCCCCAGAGCTGAATTCATTGAGTATTTGTGCCTAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR TCA 90 bp ATGCTGCCAAAAGCATATGCCCTAGTGCTCTTGAAGGCCATAGTCTaGTGCCAGGGATGCTTAAGCTGGGCACTGTTTGGCCACAGTGAC +
Preference number: 1 (lower is better)
Translates to: MLPKAYALVLLKAIV*CQGCLSWALFGHSD
Trigger: GTCACTGTGGCCAAACAGTGCCCAGCTTAAGCATCCCTGGCATCAGACTATGGCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR GCA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATaGCCTAGTGCTCTTGAAGGCCATAGTCTGATGCCAGGGATGCTT +
Preference number: 1 (lower is better)
Translates to: FPSITKSARYAAKSI*PSALEGHSLMPGML
Trigger: AAGCATCCCTGGCATCAGACTATGGCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR GCA 90 bp AGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTCTaGACTCGTTCCAGCTCTACAACATCTCCAGATTCGGAGGATCAA +
Preference number: 1 (lower is better)
Translates to: SASSPMCMRIKAFLL*TRSSSTTSPDSEDQ
Trigger: TTGATCCTCCGAATCTGGAGATGTTGTAGAGCTGGAACGAGTGCAGAGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR TCA 90 bp GCTAGTGTGGGCTCACGGGGGCCCGAGAACTGTGAAGAAGACATTTaGTTTCACCATGAGGTCATTGATGACCTTCCAGCAATGAGTTTC +
Preference number: 1 (lower is better)
Translates to: ASVGSRGPENCEEDI*FHHEVIDDLPAMSF
Trigger: GAAACTCATTGCTGGAAGGTCATCAATGACCTCATGGTGAAATCAAATGTCTTCTTCACAGTTCTCGGGCCCCCGTGAGCCCACACTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308167.10
3UTR GCA 90 bp GGCACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTaGACAACCAAACACAGTGCCCTCCAGGGGGCAGGGAGAAGAAGA +
Preference number: 1 (lower is better)
Translates to: GTLMPTAGNTHSKYI*TTKHSALQGAGRRR
Trigger: TCTTCTTCTCCCTGCCCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 90 bp CTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTaGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAG +
Preference number: 1 (lower is better)
Translates to: LIHITQSHQIIELFP*LTFLSLALKLGRRE
Trigger: CTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR TCA 90 bp GAACAAACAAAAACATTGTTGATAGAGGGGCTATCTTTAAGGAGCTaGCAAGCACCCACATGGAAATGTTCAGCAGATTGCTGGAAATGT +
Preference number: 1 (lower is better)
Translates to: EQTKTLLIEGLSLRS*QAPTWKCSADCWKC
Trigger: ACATTTCCAGCAATCTGCTGAACATTTCCATGTGGGTGCTTGTCAGCTCCTTAAAGATAGCCCCTCTATCAACAATGTTTTTGTTTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308167.10
3UTR-3UTR TCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTGGTCCGCCTTCGAGGTaGGTTGCAGGCAGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: GSHEEREVPRELLAADSRGPPSR*VAGRLS
Trigger: GCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACC...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCCCAAGGAGGTCTGCTaGAGTCATCACAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GSHEEREVPRELLAADSRPKEVC*SHHRGR
Trigger: CCTGCCTCTGTGATGACTGCAGCAGACCTCCTTGGG...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCCCTTGGTCCAGCCAGTaGGGGCTGCTCCCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: KRRARARPGEVVRSSGWFPWSSQ*GLLPEL
Trigger: CAGCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGG...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGGAGTTGCAGGCAGGCTaGGCAGCAGAAACCATGTGG +
Preference number: 2 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGELQAG*AAETMW
Trigger: CCACATGGTTTCTGCTGCTCAGCCTGCCTGCAACTC...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGCCCAAGGAGGTCTGCTaGAGTCATCACAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGPKEVC*SHHRGR
Trigger: CCTGCCTCTGTGATGACTGCAGCAGACCTCCTTGGG...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCAGGGATGCTTAAGCTaGGCACTGTTTGGCCACAGT +
Preference number: 2 (lower is better)
Translates to: GSHEEREVPRELLAADSRQGCLS*ALFGHS
Trigger: ACTGTGGCCAAACAGTGCCCAGCTTAAGCATCCCTG...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTATCACAGAGGCAGGCTaGTCCGCCTTCGAGGTGAGT +
Preference number: 2 (lower is better)
Translates to: SHEEREVPRELLAADSRLITEAG*SAFEVS
Trigger: ACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGAT...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGACTGTTTGGCCACAGTaGCACCAGGCAGGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFETVWPQ*HQAGPG
Trigger: CCCCGGCCCTGCCTGGTGTCACTGTGGCCAAACAGT...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTAGCCTGACTGCAAGGTaGCTGTGGTTGCTAACACGG +
Preference number: 2 (lower is better)
Translates to: SHEEREVPRELLAADSRLSLTAR*LWLLTR
Trigger: CCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCT...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTGTGGTAGGTGCCCATaGTTGAGCAGGAATGGGGGT +
Preference number: 2 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGCGRCP*LSRNGG
Trigger: ACCCCCATTCCTGCTCAAGCATGGGCACCTACCACA...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp ATCACAGAGGCAGGCTGGTCCGCCTTCGAGGTGAGTTGCAGGCAGGCTGAGCAGATGCTTGAGCAGGAATaGGGGTGGACCCCATCTAGG +
Preference number: 2 (lower is better)
Translates to: ITEAGWSAFEVSCRQAEQMLEQE*GWTPSR
Trigger: CCTAGATGGGGTCCACCCCCATTCCTGCTCAAGCAT...CTGCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp TGCAGGAGAGCCCAGCTAGTGTGGGCTCACGGGGGCCCGAGAACTGTGAAGAAGGGAGATGAGGGGCATTaGTACACCCAAGGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: CRRAQLVWAHGGPRTVKKGDEGH*YTQGGL
Trigger: CAGACCTCCTTGGGTGTACCAATGCCCCTCATCTCC...CTTCTTCACAGTTCTCGGGCCCCCGTGAGCCCACACTAGCTGGGCTCTCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308167.10
3UTR-3UTR CCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGGGAGATGAGGGGCATTaGTACACCCAAGGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGGDEGH*YTQGGL
Trigger: CAGACCTCCTTGGGTGTACCAATGCCCCTCATCTCC...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CAA 90 bp AGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTaGGTGAAGGAGTCAGGGTTAGGTGTGAAAGTGGGAGATGAGGGG +
Preference number: 2 (lower is better)
Translates to: RERCHGNSWLPTPVF*VKESGLGVKVGDEG
Trigger: CCCCTCATCTCCCACTTTCACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTTGGGGTCAAGTGTATTaGCATCCCACTGAAATGCAG +
Preference number: 2 (lower is better)
Translates to: GSHEEREVPRELLAADSRWGQVY*HPTEMQ
Trigger: CTGCATTTCAGTGGGATGTCAATACACTTGACCCCA...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCCGGCCTTTGTGTCCCTaGGGAGCGCATCTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: KRRARARPGEVVRSSGWFRPLCP*GAHLPQ
Trigger: TTGGGGAAGATGCGCTCCTCAGGGACACAAAGGCCG...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTCCTTGGTCCAGCCAGTaGGGGCTGCTCCCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTPWSSQ*GLLPEL
Trigger: CAGCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGG...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAACCCCATCTAGGTCGCTaGCGGACTAGCCGCAGTGAT +
Preference number: 2 (lower is better)
Translates to: GRGEEIQAIGLGVGFEREPHLGR*RTSRSD
Trigger: ATCACTGCGGCTAGTCCGGCAGCGACCTAGATGGGG...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp TGCAGGAGAGCCCAGCTAGTGTGGGCTCACGGGGGCCCGAGAACTGTGAAGAAGATCGGGGAAGTAGGCTaGGGTGTCAGCAAAGGCTAT +
Preference number: 2 (lower is better)
Translates to: CRRAQLVWAHGGPRTVKKIGEVG*GVSKGY
Trigger: ATAGCCTTTGCTGACACCCCAGCCTACTTCCCCGAT...CTTCTTCACAGTTCTCGGGCCCCCGTGAGCCCACACTAGCTGGGCTCTCCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308167.10
3UTR-3UTR CCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTGAGCAGGAATGGGGGTaGACCCCATCTAGGTCGCTG +
Preference number: 2 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCEQEWG*TPSRSL
Trigger: CAGCGACCTAGATGGGGTCCACCCCCATTCCTGCTC...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp TGCAGGAGAGCCCAGCTAGTGTGGGCTCACGGGGGCCCGAGAACTGTGAAGAAGCTGGCCACAAACTTCTaGCTGGCTCAAGGCTTTTTC +
Preference number: 2 (lower is better)
Translates to: CRRAQLVWAHGGPRTVKKLATNF*LAQGFF
Trigger: GAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAG...CTTCTTCACAGTTCTCGGGCCCCCGTGAGCCCACACTAGCTGGGCTCTCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308167.10
3UTR-3UTR GCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGCTTCCCCAATGTGCATaGGCATCAAAGCGTTCCTAC +
Preference number: 2 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGLPQCA*ASKRSY
Trigger: GTAGGAACGCTTTGATGCGCATGCACATTGGGGAAG...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGAGATTCCAGCCTGACTaGAAGGTGACTGTGGTTGCT +
Preference number: 2 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGRFQPD*KVTVVA
Trigger: AGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCT...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp GGCAAACTCCAGGAAGAGTACCTTGGTCCAGCCAGTGAGGGCTGCTCCCAGAGCCTGCTCAATTTTGCCTaGTGGGTCACACTTGCCCTG +
Preference number: 2 (lower is better)
Translates to: GKLQEEYLGPASEGCSQSLLNFA*WVTLAL
Trigger: CAGGGCAAGTGTGACCCACCAGGCAAAATTGAGCAG...GCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGGTACTCTTCCTGGAGTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAGTAGGTGCCCATGCTTaGGCAGGAATGGGGGTGGAC +
Preference number: 2 (lower is better)
Translates to: FPWLTFLSLALKLGRREAVGAHA*AGMGVD
Trigger: GTCCACCCCCATTCCTGCTCAAGCATGGGCACCTAC...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp TGCAGGAGAGCCCAGCTAGTGTGGGCTCACGGGGGCCCGAGAACTGTGAAGAAGATGACCTTCCAGCAATaGGTTTCCATGGAGTTGGAG +
Preference number: 2 (lower is better)
Translates to: CRRAQLVWAHGGPRTVKKMTFQQ*VSMELE
Trigger: CTCCAACTCCATGGAAACTCATTGCTGGAAGGTCAT...CTTCTTCACAGTTCTCGGGCCCCCGTGAGCCCACACTAGCTGGGCTCTCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308167.10
3UTR-3UTR GCA 90 bp GGCAAACTCCAGGAAGAGTACCTTGGTCCAGCCAGTGAGGGCTGCTCCCAGAGCCTGGCCACAAACTTCTaGCTGGCTCAAGGCTTTTTC +
Preference number: 2 (lower is better)
Translates to: GKLQEEYLGPASEGCSQSLATNF*LAQGFF
Trigger: GAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAG...GCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGGTACTCTTCCTGGAGTTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGAAATCCCTATCCCTGTaGCTGATCCACGGAGACATA +
Preference number: 2 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGKSLSL*LIHGDI
Trigger: TATGTCTCCGTGGATCAGCCACAGGGATAGGGATTT...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGCCTTCCCTCCCTTCGTaGTTTTACCCCACTCGGCCT +
Preference number: 2 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFEPSLPS*FYPTRP
Trigger: AGGCCGAGTGGGGTAAAACCACGAAGGGAGGGAAGG...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCACTGTTTGGCCACAGTaGCACCAGGCAGGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGTVWPQ*HQAGPG
Trigger: CCCCGGCCCTGCCTGGTGTCACTGTGGCCAAACAGT...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGACCCTATCCCTGTGGCTaGTCCACGGAGACATACACA +
Preference number: 2 (lower is better)
Translates to: TKKRRARARPGEVVRSSGPYPCG*STETYT
Trigger: TGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGG...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCATCGGGGAAGTAGGCTaGGGTGTCAGCAAAGGCTAT +
Preference number: 2 (lower is better)
Translates to: KRRARARPGEVVRSSGWFIGEVG*GVSKGY
Trigger: ATAGCCTTTGCTGACACCCCAGCCTACTTCCCCGAT...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACGTATTGACATCCCACTaGAATGCAGGGGCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHVLTSH*NAGAGV
Trigger: CACACCTGCCCCTGCATTTCAGTGGGATGTCAATAC...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTAGCCGCAGTGATGCCTaGCAGCTGGAAAATGTCAAA +
Preference number: 2 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCSRSDA*QLENVK
Trigger: TTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCT...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAACAAGTCAGCCCGTTATaGTGCCAAAAGCATATGCCC +
Preference number: 2 (lower is better)
Translates to: GRGEEIQAIGLGVGFEREQVSPL*CQKHMP
Trigger: GGGCATATGCTTTTGGCAGCATAACGGGCTGACTTG...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAACTTCCCCAATGTGCATaGGCATCAAAGCGTTCCTAC +
Preference number: 2 (lower is better)
Translates to: GRGEEIQAIGLGVGFERELPQCA*ASKRSY
Trigger: GTAGGAACGCTTTGATGCGCATGCACATTGGGGAAG...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGCTGCTCAATTTTGCCTaGTGGGTCACACTTGCCCTG +
Preference number: 2 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFELLNFA*WVTLAL
Trigger: CAGGGCAAGTGTGACCCACCAGGCAAAATTGAGCAG...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CAA 90 bp CCAAGCCCTAGGCACAAATACTCAATGAATTCAGCTCTGGGGGCTTaGTGGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAA +
Preference number: 2 (lower is better)
Translates to: PSPRHKYSMNSALGA*WLALRLEGTSSPSK
Trigger: TTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCACAAAGCCCCCAGAGCTGAATTCATTGAGTATTTGTGCCTAGGGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAGCTGCCAAAAGCATATaGCCTAGTGCTCTTGAAGGC +
Preference number: 2 (lower is better)
Translates to: TKKRRARARPGEVVRSSGAAKSI*PSALEG
Trigger: GCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGC...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGGCTGCCAAAAGCATATaGCCTAGTGCTCTTGAAGGC +
Preference number: 2 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWAAKSI*PSALEG
Trigger: GCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGC...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGGCTGCCAAAAGCATATaGCCTAGTGCTCTTGAAGGC +
Preference number: 2 (lower is better)
Translates to: ALPSNLAGGRQARLKKGEAAKSI*PSALEG
Trigger: GCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGC...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp GTCCCTGAGGAGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTCAAGTCAGCCCGTTATaGTGCCAAAAGCATATGCCC +
Preference number: 2 (lower is better)
Translates to: VPEERIFPNVHAHQSVPTQVSPL*CQKHMP
Trigger: GGGCATATGCTTTTGGCAGCATAACGGGCTGACTTG...AGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp GTCCCTGAGGAGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTCTGGCCACAAACTTCTaGCTGGCTCAAGGCTTTTTC +
Preference number: 2 (lower is better)
Translates to: VPEERIFPNVHAHQSVPTLATNF*LAQGFF
Trigger: GAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAG...AGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp CCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCCTCTTCTCACAAAGCTaGTGCACAAACCCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: PRFQPDCKVTVVANTANSLFSQS*CTNPGH
Trigger: GTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAG...GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACGCCTTCGAGGTGAGTTaGAGGCAGGCTGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: YQGHSKGPQALIHITQSHAFEVS*RQAEQQ
Trigger: CTGCTGCTCAGCCTGCCTGCAACTCACCTCGAAGGC...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAGCCTTCGAGGTGAGTTaGAGGCAGGCTGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: GHSKGPQALIHITQSHQIAFEVS*RQAEQQ
Trigger: CTGCTGCTCAGCCTGCCTGCAACTCACCTCGAAGGC...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATCCACAAACTTCTGCCTaGCTCAAGGCTTTTTCCCTC +
Preference number: 2 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNPQTSA*LKAFSL
Trigger: GAGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGG...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGTTCAGCAAAGCACTTTaGGGTGGCCCAAGATTCCAG +
Preference number: 2 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFEFSKAL*GGPRFQ
Trigger: CTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCCGCAGTGATGCCTaGCAGCTGGAAAATGTCAAA +
Preference number: 2 (lower is better)
Translates to: FPWLTFLSLALKLGRREASRSDA*QLENVK
Trigger: TTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCT...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATAATGCTGCTCAATTTTaGCTGGTGGGTCACACTTGC +
Preference number: 2 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNNAAQF*LVGHTC
Trigger: GCAAGTGTGACCCACCAGGCAAAATTGAGCAGCATT...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAAAACCATGTGGTAGGTaGCCATGCTTGAGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: TKKRRARARPGEVVRSSGKPCGR*PCLSRN
Trigger: ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTT...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGCCACAAACTTCTGCCTaGCTCAAGGCTTTTTCCCTC +
Preference number: 2 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKPQTSA*LKAFSL
Trigger: GAGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGG...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTCCACAAACTTCTGCCTaGCTCAAGGCTTTTTCCCTC +
Preference number: 2 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTPQTSA*LKAFSL
Trigger: GAGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGG...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGACATACACACACCCTTaGAGACAAGACCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: ALPSNLAGGRQARLKKGETYTHP*RQDLTA
Trigger: AGCTGTGAGGTCTTGTCTCCAAGGGTGTGTGTATGT...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGAAATCCCTATCCCTGTaGCTGATCCACGGAGACATA +
Preference number: 2 (lower is better)
Translates to: ALPSNLAGGRQARLKKGEKSLSL*LIHGDI
Trigger: TATGTCTCCGTGGATCAGCCACAGGGATAGGGATTT...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGCCTTGCCCTCAAACTTaGCAGGAGGGAGGCAAGCTC +
Preference number: 2 (lower is better)
Translates to: GNTHSKYICTTKHSALQGPCPQT*QEGGKL
Trigger: GAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGG...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGTATTGACATCCCACTaGAATGCAGGGGCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: FPSITKSARYAAKSICPSVLTSH*NAGAGV
Trigger: CACACCTGCCCCTGCATTTCAGTGGGATGTCAATAC...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp TGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGAGGGAGCCCAGGATCGGGGTATTGACATCCCACTaGAATGCAGGGGCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: CLTAGKCQKVIKREPRIGVLTSH*NAGAGV
Trigger: CACACCTGCCCCTGCATTTCAGTGGGATGTCAATAC...CCCGATCCTGGGCTCCCTCTTGATTACTTTTTGACATTTTCCAGCTGTCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp GCCGGACTAGCCGCAGTGATGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAACCCTATCCCTGTGGCTaGTCCACGGAGACATACACA +
Preference number: 2 (lower is better)
Translates to: AGLAAVMPDSWKMSKSNQPYPCG*STETYT
Trigger: TGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGG...TTGATTACTTTTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCTAGTCCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGAGCCTGACTGCAAGGTaGCTGTGGTTGCTAACACGG +
Preference number: 2 (lower is better)
Translates to: GNTHSKYICTTKHSALQGSLTAR*LWLLTR
Trigger: CCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCT...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp CCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAATGCTGCTCAATTTTaGCTGGTGGGTCACACTTGC +
Preference number: 2 (lower is better)
Translates to: PRFQPDCKVTVVANTANSNAAQF*LVGHTC
Trigger: GCAAGTGTGACCCACCAGGCAAAATTGAGCAGCATT...GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp CCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAAAGCGTTCCTACTCTaGACTCGTTCCAGCTCTACA +
Preference number: 2 (lower is better)
Translates to: PRFQPDCKVTVVANTANSKAFLL*TRSSST
Trigger: TGTAGAGCTGGAACGAGTGCAGAGTAGGAACGCTTT...GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp AAAATGAGCCCAAAATGGATGAGATTCTTGAACAGCCACGTTGGAAGTGGTAGGACGGGAACTCCTGGCTaGCGACTCCCGTCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: KMSPKWMRFLNSHVGSGRTGTPG*RLPSSW
Trigger: CCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGT...CCTACCACTTCCAACGTGGCTGTTCAAGAATCTCATCCATTTTGGGCTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308167.10
3UTR-3UTR CCA 90 bp AGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCTTGAAGGCCATACTGCTCAATTTTGCCTaGTGGGTCACACTTGCCCTG +
Preference number: 2 (lower is better)
Translates to: SQPVMLPKAYALVLLKAILLNFA*WVTLAL
Trigger: CAGGGCAAGTGTGACCCACCAGGCAAAATTGAGCAG...TATGGCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAAATCCCTATCCCTGTaGCTGATCCACGGAGACATA +
Preference number: 2 (lower is better)
Translates to: FPWLTFLSLALKLGRREAKSLSL*LIHGDI
Trigger: TATGTCTCCGTGGATCAGCCACAGGGATAGGGATTT...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGTGCCACGGGAACTCCTaGCTGCCGACTCCCGTCTTC +
Preference number: 2 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVCHGNS*LPTPVF
Trigger: GAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCCGGCCTTTGTGTCCCTaGGGAGCGCATCTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSRPLCP*GAHLPQ
Trigger: TTGGGGAAGATGCGCTCCTCAGGGACACAAAGGCCG...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCACGGGAACTCCTGGCTaGCGACTCCCGTCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSTGTPG*RLPSSW
Trigger: CCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGT...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGATCGGGGAAGTAGGCTaGGGTGTCAGCAAAGGCTAT +
Preference number: 2 (lower is better)
Translates to: GNTHSKYICTTKHSALQGIGEVG*GVSKGY
Trigger: ATAGCCTTTGCTGACACCCCAGCCTACTTCCCCGAT...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAACTGTTTGGCCACAGTaGCACCAGGCAGGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKTVWPQ*HQAGPG
Trigger: CCCCGGCCCTGCCTGGTGTCACTGTGGCCAAACAGT...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp ACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACGAGTTGCAGGCAGGCTaGGCAGCAGAAACCATGTGG +
Preference number: 2 (lower is better)
Translates to: TDSHYPKSPDNRVVSVADELQAG*AAETMW
Trigger: CCACATGGTTTCTGCTGCTCAGCCTGCCTGCAACTC...GTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGAGTTGTTTCCGTGGCTaGCATTTCTTAGCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: GNTHSKYICTTKHSALQGSCFRG*HFLALP
Trigger: GGGCAAGGCTAAGAAATGTCAGCCACGGAAACAACT...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGGACATCCCACTGAAATaGAGGGGCAGGTGTGCTACT +
Preference number: 2 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKDIPLK*RGRCAT
Trigger: AGTAGCACACCTGCCCCTGCATTTCAGTGGGATGTC...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGGCATCTTCCCCAATGTaGATGCGCATCAAAGCGTTC +
Preference number: 2 (lower is better)
Translates to: GNTHSKYICTTKHSALQGASSPM*MRIKAF
Trigger: GAACGCTTTGATGCGCATGCACATTGGGGAAGATGC...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp TGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGAGGGAGCCCAGGATCGGGACATACACACACCCTTaGAGACAAGACCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: CLTAGKCQKVIKREPRIGTYTHP*RQDLTA
Trigger: AGCTGTGAGGTCTTGTCTCCAAGGGTGTGTGTATGT...CCCGATCCTGGGCTCCCTCTTGATTACTTTTTGACATTTTCCAGCTGTCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGTGGGGTCAAGTGTATTaGCATCCCACTGAAATGCAG +
Preference number: 2 (lower is better)
Translates to: GNTHSKYICTTKHSALQGWGQVY*HPTEMQ
Trigger: CTGCATTTCAGTGGGATGTCAATACACTTGACCCCA...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGAGCCTGACTGCAAGGTaGCTGTGGTTGCTAACACGG +
Preference number: 2 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVSLTAR*LWLLTR
Trigger: CCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCT...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp TTCCTACTCTGCACTCGTTCCAGCTCTACAACATCTCCAGATTCGGAGGATCAAAATGCTGCTCAATTTTaGCTGGTGGGTCACACTTGC +
Preference number: 2 (lower is better)
Translates to: FLLCTRSSSTTSPDSEDQNAAQF*LVGHTC
Trigger: GCAAGTGTGACCCACCAGGCAAAATTGAGCAGCATT...TTGATCCTCCGAATCTGGAGATGTTGTAGAGCTGGAACGAGTGCAGAGTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGAAAGCGTTCCTACTCTaGACTCGTTCCAGCTCTACA +
Preference number: 2 (lower is better)
Translates to: GNTHSKYICTTKHSALQGKAFLL*TRSSST
Trigger: TGTAGAGCTGGAACGAGTGCAGAGTAGGAACGCTTT...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAAAAGCGTTCCTACTCTaGACTCGTTCCAGCTCTACA +
Preference number: 2 (lower is better)
Translates to: GHSKGPQALIHITQSHQIKAFLL*TRSSST
Trigger: TGTAGAGCTGGAACGAGTGCAGAGTAGGAACGCTTT...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACAAACCATGTGGTAGGTaGCCATGCTTGAGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: YQGHSKGPQALIHITQSHKPCGR*PCLSRN
Trigger: ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTT...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTGAGCAGGAATGGGGGTaGACCCCATCTAGGTCGCTG +
Preference number: 2 (lower is better)
Translates to: IHITQSHQIIELFPWLTFEQEWG*TPSRSL
Trigger: CAGCGACCTAGATGGGGTCCACCCCCATTCCTGCTC...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CAA 90 bp CACTCGTTCCAGCTCTACAACATCTCCAGATTCGGAGGATCAAACTaGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCATGAACAAA +
Preference number: 2 (lower is better)
Translates to: HSFQLYNISRFGGSN*YPIVSEQLNLGMNK
Trigger: TTTGTTCATGCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGAGATGTTGTAGAGCTGGAACGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CAA 90 bp CCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTaGTTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGC +
Preference number: 2 (lower is better)
Translates to: PQALIHITQSHQIIE*FPWLTFLSLALKLG
Trigger: GCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCAGGGATGCTTAAGCTaGGCACTGTTTGGCCACAGT +
Preference number: 2 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVQGCLS*ALFGHS
Trigger: ACTGTGGCCAAACAGTGCCCAGCTTAAGCATCCCTG...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTCCTTGCCCTCAAACTTaGCAGGAGGGAGGCAAGCTC +
Preference number: 2 (lower is better)
Translates to: IHITQSHQIIELFPWLTFPCPQT*QEGGKL
Trigger: GAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGG...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGAGCCGCAGTGATGCCTaGCAGCTGGAAAATGTCAAA +
Preference number: 2 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVSRSDA*QLENVK
Trigger: TTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCT...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGTTCAGCAAAGCACTTTaGGGTGGCCCAAGATTCCAG +
Preference number: 2 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVFSKAL*GGPRFQ
Trigger: CTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTGACATCCCACTGAAATaGAGGGGCAGGTGTGCTACT +
Preference number: 2 (lower is better)
Translates to: IHITQSHQIIELFPWLTFDIPLK*RGRCAT
Trigger: AGTAGCACACCTGCCCCTGCATTTCAGTGGGATGTC...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGATAGAGTTGTTTCCGTaGCTGACATTTCTTAGCCTT +
Preference number: 2 (lower is better)
Translates to: GNTHSKYICTTKHSALQGIELFP*LTFLSL
Trigger: AAGGCTAAGAAATGTCAGCCACGGAAACAACTCTAT...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR TCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAATGTGAAAGTGGGAGATaGGGGGCATTGGTACACCCA +
Preference number: 2 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKCESGR*GALVHP
Trigger: TGGGTGTACCAATGCCCCTCATCTCCCACTTTCACA...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR GCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAAGATTCCAGCCTGACTaGAAGGTGACTGTGGTTGCT +
Preference number: 2 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKRFQPD*KVTVVA
Trigger: AGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCT...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTACATACACACACCCTTaGAGACAAGACCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: IHITQSHQIIELFPWLTFTYTHP*RQDLTA
Trigger: AGCTGTGAGGTCTTGTCTCCAAGGGTGTGTGTATGT...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAGTTAGGTCAAGTGGATaGTTCTGTACCAAGGACACA +
Preference number: 2 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKVRSSG*FCTKDT
Trigger: TGTGTCCTTGGTACAGAACCATCCACTTGACCTAAC...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 72 bp GGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTaGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCA +
Preference number: 3 (lower is better)
Translates to: GATKRERCHGNS*LPTPVFLVKES
Trigger: TGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR TCA 72 bp CAGTCATCACAGAGGCAGGCTGGTCCGCCTTCGAGGTaGGTTGCAGGCAGGCTGAGCAGCAGAAACCATGTG +
Preference number: 3 (lower is better)
Translates to: QSSQRQAGPPSR*VAGRLSSRNHV
Trigger: CACATGGTTTCTGCTGCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGATGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR GCA 72 bp GAGATGAGGGGCATTGGTACACCCAAGGAGGTCTGCTaGAGTCATCACAGAGGCAGGCTGGTCCGCCTTCGA +
Preference number: 3 (lower is better)
Translates to: EMRGIGTPKEVC*SHHRGRLVRLR
Trigger: TCGAAGGCGGACCAGCCTGCCTCTGTGATGACTGCAGCAGACCTCCTTGGGTGTACCAATGCCCCTCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CAA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTAAATGCTGCTCAATTTaGCCTGGTGGGTCACACTTG +
Preference number: 3 (lower is better)
Translates to: GSHEEREVPRELLAADSRKCCSI*PGGSHL
Trigger: CAAGTGTGACCCACCAGGCAAAATTGAGCAGCATTT...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CAA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTGCAGGGCCGGGGGACTaGGGGTCAAGTGTATTGACA +
Preference number: 3 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCAGPGD*GSSVLT
Trigger: TGTCAATACACTTGACCCCAAGTCCCCCGGCCCTGC...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CAA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGGCAGGGCCGGGGGACTaGGGGTCAAGTGTATTGACA +
Preference number: 3 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWAGPGD*GSSVLT
Trigger: TGTCAATACACTTGACCCCAAGTCCCCCGGCCCTGC...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR GCA 72 bp CAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATaGTTGAGCAGGAATGGGGGTGGACCCCATCTAGGT +
Preference number: 3 (lower is better)
Translates to: QAEQQKPCGRCP*LSRNGGGPHLG
Trigger: ACCTAGATGGGGTCCACCCCCATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR GCA 72 bp GCCTTTGTGTCCCTGAGGAGCGCATCTTCCCCAATGTaGATGCGCATCAAAGCGTTCCTACTCTGCACTCGT +
Preference number: 3 (lower is better)
Translates to: AFVSLRSASSPM*MRIKAFLLCTR
Trigger: ACGAGTGCAGAGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGACACAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR TCA 72 bp TTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTaGCTGTGGTTGCTAACACGGCAAACTCCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: FGVAQDSSLTAR*LWLLTRQTPGR
Trigger: TCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR TCA 72 bp ATGAGATTCTTGAACAGCCACGTTGGAAGTGGTAGGTaGAGAACCAGCCCCGGAAAGGGTGATGGGGGATGC +
Preference number: 3 (lower is better)
Translates to: MRFLNSHVGSGR*RTSPGKGDGGC
Trigger: GCATCCCCCATCACCCTTTCCGGGGCTGGTTCTTCACCTACCACTTCCAACGTGGCTGTTCAAGAATCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308167.10
3UTR GCA 72 bp AAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTaGAAGGTGACTGTGGTTGCTAACACGGCAAACTCC +
Preference number: 3 (lower is better)
Translates to: KALWGGPRFQPD*KVTVVANTANS
Trigger: GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 72 bp AAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTaGCTCAAGGCTTTTTCCCTCCATCACCAAGTCAGC +
Preference number: 3 (lower is better)
Translates to: KLLHKPWPQTSA*LKAFSLHHQVS
Trigger: GCTGACTTGGTGATGGAGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 72 bp TCAGGGTTAGGTGTGAAAGTGGGAGATGAGGGGCATTaGTACACCCAAGGAGGTCTGCTGCAGTCATCACAG +
Preference number: 3 (lower is better)
Translates to: SGLGVKVGDEGH*YTQGGLLQSSQ
Trigger: CTGTGATGACTGCAGCAGACCTCCTTGGGTGTACCAATGCCCCTCATCTCCCACTTTCACACCTAACCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CAA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTGACATACACACACCCTaGGAGACAAGACCTCACAGC +
Preference number: 3 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTDIHTP*ETRPHS
Trigger: GCTGTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTC...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR GCA 72 bp CACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTaGCTGGCTCAAGGCTTTTTCCCTCCATCACCAAGT +
Preference number: 3 (lower is better)
Translates to: HKAAAQTLATNF*LAQGFFPPSPS
Trigger: ACTTGGTGATGGAGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 72 bp ACTTCATCCCCGTCTAAATCCTTCAGCAAAGCACTTTaGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTG +
Preference number: 3 (lower is better)
Translates to: TSSPSKSFSKAL*GGPRFQPDCKV
Trigger: CACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAAGGATTTAGACGGGGATGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 72 bp GCAGGGAGAAGAAGAGTAGGAGAGGGTGATAGTTGTTaGCTTAACAAAGAAGAGAAGAGCGAGAGCGCGGCC +
Preference number: 3 (lower is better)
Translates to: AGRRRVGEGDSC*LNKEEKSESAA
Trigger: GGCCGCGCTCTCGCTCTTCTCTTCTTTGTTAAGCCAACAACTATCACCCTCTCCTACTCTTCTTCTCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CAA 90 bp GTCCCTGAGGAGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTAAATGCTGCTCAATTTaGCCTGGTGGGTCACACTTG +
Preference number: 3 (lower is better)
Translates to: VPEERIFPNVHAHQSVPTKCCSI*PGGSHL
Trigger: CAAGTGTGACCCACCAGGCAAAATTGAGCAGCATTT...AGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CAA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATATCCAGGAAGAGTACCTaGGTCCAGCCAGTGAGGGCT +
Preference number: 3 (lower is better)
Translates to: GHSKGPQALIHITQSHQISRKST*VQPVRA
Trigger: AGCCCTCACTGGCTGGACCAAGGTACTCTTCCTGGA...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CAA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTAAATGCTGCTCAATTTaGCCTGGTGGGTCACACTTG +
Preference number: 3 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTKCCSI*PGGSHL
Trigger: CAAGTGTGACCCACCAGGCAAAATTGAGCAGCATTT...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CAA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTTTCGGAGGATCAAACTaGTACCCCATAGTCTCAGAG +
Preference number: 3 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTFGGSN*YPIVSE
Trigger: CTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAA...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR-3UTR CAA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCCACCAGATAATAGAGTaGTTTCCGTGGCTGACATTT +
Preference number: 3 (lower is better)
Translates to: KRRARARPGEVVRSSGWFHQIIE*FPWLTF
Trigger: AAATGTCAGCCACGGAAACAACTCTATTATCTGGTG...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR GCA 72 bp TCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTCTaGACTCGTTCCAGCTCTACAACATCTCCAGATTCG +
Preference number: 3 (lower is better)
Translates to: SPMCMRIKAFLL*TRSSSTTSPDS
Trigger: CGAATCTGGAGATGTTGTAGAGCTGGAACGAGTGCAGAGTAGGAACGCTTTGATGCGCATGCACATTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR GCA 72 bp ATGCCAACTGCTGGAAACACGCATAGTAAATACATTTaGACAACCAAACACAGTGCCCTCCAGGGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: MPTAGNTHSKYI*TTKHSALQGAG
Trigger: CCCTGCCCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR GCA 72 bp ATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATaGCCTAGTGCTCTTGAAGGCCATAGTCTGATGCCA +
Preference number: 3 (lower is better)
Translates to: ITKSARYAAKSI*PSALEGHSLMP
Trigger: TGGCATCAGACTATGGCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 72 bp AGGACCCATCTCCGAGGAGCCAAAATGAGCCCAAAATaGATGAGATTCTTGAACAGCCACGTTGGAAGTGGT +
Preference number: 3 (lower is better)
Translates to: RTHLRGAKMSPK*MRFLNSHVGSG
Trigger: ACCACTTCCAACGTGGCTGTTCAAGAATCTCATCCATTTTGGGCTCATTTTGGCTCCTCGGAGATGGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308167.10
3UTR-3UTR CAA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCTTCAGCAAAGCACTTaGGGGTGGCCCAAGATTCCA +
Preference number: 3 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVLQQST*GWPKIP
Trigger: TGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAAG...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CCA 72 bp ATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTaGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGC +
Preference number: 3 (lower is better)
Translates to: ITQSHQIIELFP*LTFLSLALKLG
Trigger: GCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTGGTCCAGCCCCTGTaGCCGTGGGTGGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SHEEREVPRELLAADSRLLVQPL*PWVAPG
Trigger: ACCCGGCGCCACCCACGGTCACAGGGGCTGGACCAG...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp ATCACAGAGGCAGGCTGGTCCGCCTTCGAGGTGAGTTGCAGGCAGGCTGAGCAGACTGTTTGGCCACAGTaGCACCAGGCAGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: ITEAGWSAFEVSCRQAEQTVWPQ*HQAGPG
Trigger: CCCCGGCCCTGCCTGGTGTCACTGTGGCCAAACAGT...CTGCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTACTGTTTGGCCACAGTaGCACCAGGCAGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SHEEREVPRELLAADSRLTVWPQ*HQAGPG
Trigger: CCCCGGCCCTGCCTGGTGTCACTGTGGCCAAACAGT...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGCCTTGGTCCAGCCAGTaGGGGCTGCTCCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGPWSSQ*GLLPEL
Trigger: CAGCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGG...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTGGTCCGCCTTCGAGGTaGGTTGCAGGCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SHEEREVPRELLAADSRLGPPSR*VAGRLS
Trigger: GCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACC...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCACAACCAAACACAGTaGCCTCCAGGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GSHEEREVPRELLAADSRHNQTQ*PPGGRE
Trigger: CTCCCTGCCCCCTGGAGGGCACTGTGTTTGGTTGTG...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTGAGGTGGGGCTGCTGTaGCTTCGCTGCTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GSHEEREVPRELLAADSREVGLL*LRCSHP
Trigger: AGGATGAGAGCAGCGAAGCCACAGCAGCCCCACCTC...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCGTGGAGGCCTGAGGTaGGGCTGCTGTGGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: SHEEREVPRELLAADSRLRGGLR*GCCGFA
Trigger: AGCGAAGCCACAGCAGCCCCACCTCAGGCCTCCACG...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTTTCGCCGGGTGGTACTaGCAGAGGCCACAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SHEEREVPRELLAADSRLFAGWY*QRPQRP
Trigger: CGGCCTCTGTGGCCTCTGCCAGTACCACCCGGCGAA...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGGGTAGTTGGGCAGAGTaGCAGCTGGTGCAGGGTCCG +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGGSWAE*QLVQGP
Trigger: CGGACCCTGCACCAGCTGTCACTCTGCCCAACTACC...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGGGTTGGTCGGACGGTTaGCCCCAGCCAGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGGWSDG*PQPEVG
Trigger: CCCAACTTCTGGCTGGGGCCAACCGTCCGACCAACC...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCTGGGTGGCGCCGGGTTaGTCGGACGGTTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KRRARARPGEVVRSSGWFWVAPG*SDGWPQ
Trigger: CTGGGGCCAACCGTCCGACCAACCCGGCGCCACCCA...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTCTGGTCCAGCCCCTGTaGCCGTGGGTGGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTLVQPL*PWVAPG
Trigger: ACCCGGCGCCACCCACGGTCACAGGGGCTGGACCAG...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGCGGCCTTTGTGTCCCTaGGGAGCGCATCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGRPLCP*GAHLPQ
Trigger: TTGGGGAAGATGCGCTCCTCAGGGACACAAAGGCCG...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTAGCCCTCCAGAGCTGTaGGGCTTTCTTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: GSHEEREVPRELLAADSRSPPEL*GFLDEG
Trigger: CCCTTCATCAAGAAAGCCCCACAGCTCTGGAGGGCT...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGCCCTGTGACCGTGGGTaGCGCCGGGTTGGTCGGACG +
Preference number: 4 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFEPCDRG*RRVGRT
Trigger: CGTCCGACCAACCCGGCGCCACCCACGGTCACAGGG...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTCCCTGTGACCGTGGGTaGCGCCGGGTTGGTCGGACG +
Preference number: 4 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPPCDRG*RRVGRT
Trigger: CGTCCGACCAACCCGGCGCCACCCACGGTCACAGGG...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGCAGAGTGACAGCTGGTaGAGGGTCCGAGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGQSDSW*RVRVWK
Trigger: CTTCCAGACTCGGACCCTGCACCAGCTGTCACTCTG...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAAGGCCTGAGGTGGGGCTaGTGTGGCTTCGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRGEEIQAIGLGVGFEREGLRWG*CGFAAL
Trigger: GAGAGCAGCGAAGCCACAGCAGCCCCACCTCAGGCC...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTGGTGGGTCACACTTaGCCTGACCCCTTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: GSHEEREVPRELLAADSRLVGHT*PDPFAY
Trigger: ATAAGCAAAGGGGTCAGGGCAAGTGTGACCCACCAG...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTGGGGCCACTCCTAGGTaGATGTTGCTGGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: SHEEREVPRELLAADSRLGATPR*MLLGTE
Trigger: TTCAGTGCCCAGCAACATCCACCTAGGAGTGGCCCC...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGCCTTCCCTCCCTTCGTaGTTTTACCCCACTCGGCCT +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGPSLPS*FYPTRP
Trigger: AGGCCGAGTGGGGTAAAACCACGAAGGGAGGGAAGG...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp CCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCACCACAGGAGCGACCTaGGGCCGAGTGGCTCACGGG +
Preference number: 4 (lower is better)
Translates to: PRFQPDCKVTVVANTANSTTGAT*GRVAHG
Trigger: CCCGTGAGCCACTCGGCCTCAGGTCGCTCCTGTGGT...GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR TCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTAGGTCCCGTCTGTTATaGTGCCATTGTGAACGTCGT +
Preference number: 4 (lower is better)
Translates to: GSHEEREVPRELLAADSRRSRLL*CHCERR
Trigger: ACGACGTTCACAATGGCATCATAACAGACGGGACCT...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTGTTGGGGGAGGCCACTaGGAATCAGTGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCVGGGH*ESVEPL
Trigger: CAGGGGCTCCACTGATTCTCAGTGGCCTCCCCCAAC...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGGGTCCGCCTTCGAGGTaGGTTGCAGGCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ALPSNLAGGRQARLKKGEGPPSR*VAGRLS
Trigger: GCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACC...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTAGTTGTTTCCGTGGCTaGCATTTCTTAGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GSHEEREVPRELLAADSRSCFRG*HFLALP
Trigger: GGGCAAGGCTAAGAAATGTCAGCCACGGAAACAACT...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTGCTGTGGCTTCGCTaGTCTCATCCTCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: GSHEEREVPRELLAADSRLLWLR*SHPHLQ
Trigger: TTGAAGATGAGGATGAGAGCAGCGAAGCCACAGCAG...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGCTTGACCCTAGGGGCTaGTGTAGTGCCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGLDPRG*CSARSP
Trigger: AGGACTTCTGGCACTACAGCAGCCCCTAGGGTCAAG...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ATCACAGAGGCAGGCTGGTCCGCCTTCGAGGTGAGTTGCAGGCAGGCTGAGCAGCTCAAGGCTGCATTCTaGGCTGGACCAACCACAGGA +
Preference number: 4 (lower is better)
Translates to: ITEAGWSAFEVSCRQAEQLKAAF*AGPTTG
Trigger: TCCTGTGGTTGGTCCAGCCCAGAATGCAGCCTTGAG...CTGCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp GGCAAACTCCAGGAAGAGTACCTTGGTCCAGCCAGTGAGGGCTGCTCCCAGAGCGAGAGCTGGAGTAGGTaGTGGCCTAAGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GKLQEEYLGPASEGCSQSESWSR*WPKPGS
Trigger: TGAGCCTGGCTTAGGCCACCACCTACTCCAGCTCTC...GCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGGTACTCTTCCTGGAGTTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATCGTGGAGGCCTGAGGTaGGGCTGCTGTGGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNRGGLR*GCCGFA
Trigger: AGCGAAGCCACAGCAGCCCCACCTCAGGCCTCCACG...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAAAGCTGGTTCGCCGGGTaGTACTGGCAGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: GRGEEIQAIGLGVGFERESWFAG*YWQRPQ
Trigger: CTGTGGCCTCTGCCAGTACCACCCGGCGAACCAGCT...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGCATTGGTCAGCACCGTaGTCAGTGGGATCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGHWSAP*SVGSSA
Trigger: TGCAGACGATCCCACTGACCACGGTGCTGACCAATG...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTGGTTGGTCGGACGGTTaGCCCCAGCCAGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCGWSDG*PQPEVG
Trigger: CCCAACTTCTGGCTGGGGCCAACCGTCCGACCAACC...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGTGGGTGGCGCCGGGTTaGTCGGACGGTTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DCKVTVVANTANSRKSTLWVAPG*SDGWPQ
Trigger: CTGGGGCCAACCGTCCGACCAACCCGGCGCCACCCA...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTGGAGGAGGACCTCAGTaGCCCCTCCTTGACCCTAGG +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCGGGPQ*PLLDPR
Trigger: CCTAGGGTCAAGGAGGGGCCACTGAGGTCCTCCTCC...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAGGGTCAGCCCAACAGTaGGGCGGCTGGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGGSAQQ*GGWEET
Trigger: TGTCTCCTCCCAGCCGCCCCACTGTTGGGCTGACCC...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTTTCAGCAAAGCACTTTaGGGTGGCCCAAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: GSHEEREVPRELLAADSRFSKAL*GGPRFQ
Trigger: CTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTGTCTTTTCAGAGAGCTaGCAACGGGATTATCAGAGC +
Preference number: 4 (lower is better)
Translates to: GSHEEREVPRELLAADSRVFSES*QRDYQS
Trigger: GCTCTGATAATCCCGTTGTCAGCTCTCTGAAAAGAC...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGGGTAGTTGGGCAGAGTaGCAGCTGGTGCAGGGTCCG +
Preference number: 4 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWGSWAE*QLVQGP
Trigger: CGGACCCTGCACCAGCTGTCACTCTGCCCAACTACC...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGGGGGGCAGATCTGGATaGGACCCTGGAGCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFEGGRSG*DPGAGS
Trigger: CGAACCAGCTCCAGGGTCTCATCCAGATCTGCCCCC...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR TCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTGGGTCACACTTGCCCTaGCCCCTTTGCTTATATGTC +
Preference number: 4 (lower is better)
Translates to: SHEEREVPRELLAADSRLGSHLP*PLCLYV
Trigger: GACATATAAGCAAAGGGGTCAGGGCAAGTGTGACCC...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTGTATTGACATCCCACTaGAATGCAGGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SHEEREVPRELLAADSRLVLTSH*NAGAGV
Trigger: CACACCTGCCCCTGCATTTCAGTGGGATGTCAATAC...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAACTGTTTGGCCACAGTaGCACCAGGCAGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: FPWLTFLSLALKLGRREATVWPQ*HQAGPG
Trigger: CCCCGGCCCTGCCTGGTGTCACTGTGGCCAAACAGT...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GGCAAACTCCAGGAAGAGTACCTTGGTCCAGCCAGTGAGGGCTGCTCCCAGAGCAGCCTGACTGCAAGGTaGCTGTGGTTGCTAACACGG +
Preference number: 4 (lower is better)
Translates to: GKLQEEYLGPASEGCSQSSLTAR*LWLLTR
Trigger: CCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCT...GCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGGTACTCTTCCTGGAGTTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGCTGGTGGGTCACACTTaGCCTGACCCCTTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGLVGHT*PDPFAY
Trigger: ATAAGCAAAGGGGTCAGGGCAAGTGTGACCCACCAG...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGGACATCCCACTGAAATaGAGGGGCAGGTGTGCTACT +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGDIPLK*RGRCAT
Trigger: AGTAGCACACCTGCCCCTGCATTTCAGTGGGATGTC...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTCTTCTCACAAAGCTaGTGCACAAACCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SHEEREVPRELLAADSRLLFSQS*CTNPGH
Trigger: GTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAG...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTAAACCATGTGGTAGGTaGCCATGCTTGAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: GSHEEREVPRELLAADSRKPCGR*PCLSRN
Trigger: ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTT...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGAGGGAGCCCAGGATCGGGCGACCTGAGGCCGAGTaGCTCACGGGCCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: CLTAGKCQKVIKREPRIGRPEAE*LTGPAR
Trigger: CCGAGCTGGGCCCGTGAGCCACTCGGCCTCAGGTCG...CCCGATCCTGGGCTCCCTCTTGATTACTTTTTGACATTTTCCAGCTGTCAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CCA 90 bp TGGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAATCCTTCAGCAAATTCGCCGGGTGGTACTaGCAGAGGCCACAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: WLALRLEGTSSPSKSFSKFAGWY*QRPQRP
Trigger: CGGCCTCTGTGGCCTCTGCCAGTACCACCCGGCGAA...TTTGCTGAAGGATTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTGAGCTGCCCTTGCCCTaGGGGGCAGATCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPELPLP*GADLDE
Trigger: CTCATCCAGATCTGCCCCCCAGGGCAAGGGCAGCTC...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCGACCTGGCCCTCTGCTaGAGAGACGAGCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: KRRARARPGEVVRSSGWFDLALC*RDEHGG
Trigger: TCCACCATGCTCGTCTCTCCAGCAGAGGGCCAGGTC...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTGACCTGGCCCTCTGCTaGAGAGACGAGCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCDLALC*RDEHGG
Trigger: TCCACCATGCTCGTCTCTCCAGCAGAGGGCCAGGTC...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAAGCCACCTGGCTGTCTTaGAAACTGGCGTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GRGEEIQAIGLGVGFEREATWLS*KLAFRG
Trigger: CCCCCTGAACGCCAGTTTCCAAGACAGCCAGGTGGC...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAGGTTGGTCGGACGGTTaGCCCCAGCCAGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGGWSDG*PQPEVG
Trigger: CCCAACTTCTGGCTGGGGCCAACCGTCCGACCAACC...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTGGGTCAGCCCAACAGTaGGGCGGCTGGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTGSAQQ*GGWEET
Trigger: TGTCTCCTCCCAGCCGCCCCACTGTTGGGCTGACCC...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATTGCCACGGGAACTCCTaGCTGCCGACTCCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNCHGNS*LPTPVF
Trigger: GAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTGGGGGCAGATCTGGATaGGACCCTGGAGCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTGGRSG*DPGAGS
Trigger: CGAACCAGCTCCAGGGTCTCATCCAGATCTGCCCCC...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR TCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGGATGTTGCTGGGCACTaGAGATGCACTCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGDVAGH*RCTHSF
Trigger: AAAGCTGTGAGTGCATCTTCAGTGCCCAGCAACATC...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTGTAGGTGCCCATGCTTaGGCAGGAATGGGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPVGAHA*AGMGVD
Trigger: GTCCACCCCCATTCCTGCTCAAGCATGGGCACCTAC...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATGTAGGTGCCCATGCTTaGGCAGGAATGGGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNVGAHA*AGMGVD
Trigger: GTCCACCCCCATTCCTGCTCAAGCATGGGCACCTAC...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCGAGTTGCAGGCAGGCTaGGCAGCAGAAACCATGTGG +
Preference number: 4 (lower is better)
Translates to: KRRARARPGEVVRSSGWFELQAG*AAETMW
Trigger: CCACATGGTTTCTGCTGCTCAGCCTGCCTGCAACTC...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TGCAGGAGAGCCCAGCTAGTGTGGGCTCACGGGGGCCCGAGAACTGTGAAGAAGCCCACAGATAGATGGTaGTGCCTTTGCCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: CRRAQLVWAHGGPRTVKKPTDRW*CLCHPL
Trigger: CAAAGGATGGCAAAGGCAGCACCATCTATCTGTGGG...CTTCTTCACAGTTCTCGGGCCCCCGTGAGCCCACACTAGCTGGGCTCTCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR GCA 90 bp GGCAAACTCCAGGAAGAGTACCTTGGTCCAGCCAGTGAGGGCTGCTCCCAGAGCCTCCTAGGTGGATGTTaGTGGGCACTGAAGATGCAC +
Preference number: 4 (lower is better)
Translates to: GKLQEEYLGPASEGCSQSLLGGC*WALKMH
Trigger: GTGCATCTTCAGTGCCCAGCAACATCCACCTAGGAG...GCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGGTACTCTTCCTGGAGTTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGGCTGCCAAAAGCATATaGCCTAGTGCTCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGAAKSI*PSALEG
Trigger: GCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGC...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTGCTGCCAAAAGCATATaGCCTAGTGCTCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: SHEEREVPRELLAADSRLAAKSI*PSALEG
Trigger: GCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGC...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GTCCCTGAGGAGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTCCCCATCTAGGTCGCTaGCGGACTAGCCGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: VPEERIFPNVHAHQSVPTPHLGR*RTSRSD
Trigger: ATCACTGCGGCTAGTCCGGCAGCGACCTAGATGGGG...AGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCCCCAAGGAGGTCTGCTaGAGTCATCACAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KRRARARPGEVVRSSGWFPKEVC*SHHRGR
Trigger: CCTGCCTCTGTGATGACTGCAGCAGACCTCCTTGGG...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATACGGGAACTCCTGGCTaGCGACTCCCGTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNTGTPG*RLPSSW
Trigger: CCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGT...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGCAAACTCCAGGAAGAGTACCTTGGTCCAGCCAGTGAGGGCTGCTCCCAGAGCAATACCCAGGTACTTTaGAGCCTAGAGCCTACCCCC +
Preference number: 4 (lower is better)
Translates to: GKLQEEYLGPASEGCSQSNTQVL*SLEPTP
Trigger: GGGGGTAGGCTCTAGGCTCCAAAGTACCTGGGTATT...GCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGGTACTCTTCCTGGAGTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp TGCAGGAGAGCCCAGCTAGTGTGGGCTCACGGGGGCCCGAGAACTGTGAAGAAGGAGGGGTCTTCCAGCTaGTGGATATCATCATCCATC +
Preference number: 4 (lower is better)
Translates to: CRRAQLVWAHGGPRTVKKEGSSS*WISSSI
Trigger: GATGGATGATGATATCCACCAGCTGGAAGACCCCTC...CTTCTTCACAGTTCTCGGGCCCCCGTGAGCCCACACTAGCTGGGCTCTCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CCA 90 bp ATCACAGAGGCAGGCTGGTCCGCCTTCGAGGTGAGTTGCAGGCAGGCTGAGCAGACATGGTGTGCGAGGTaGCCTCATTGTCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: ITEAGWSAFEVSCRQAEQTWCAR*PHCHLS
Trigger: TGACAGATGACAATGAGGCCACCTCGCACACCATGT...CTGCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGGGGCAGAGTGACAGCTaGTGCAGGGTCCGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKGQSDS*CRVRVW
Trigger: CCAGACTCGGACCCTGCACCAGCTGTCACTCTGCCC...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATGAGGTGGGGCTGCTGTaGCTTCGCTGCTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNEVGLL*LRCSHP
Trigger: AGGATGAGAGCAGCGAAGCCACAGCAGCCCCACCTC...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAGAGGTGGGGCTGCTGTaGCTTCGCTGCTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGEVGLL*LRCSHP
Trigger: AGGATGAGAGCAGCGAAGCCACAGCAGCCCCACCTC...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGCAGCACCGTGGTCAGTaGGATCGTCTGCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ALPSNLAGGRQARLKKGEQHRGQ*DRLQGQ
Trigger: CTGACCCTGCAGACGATCCCACTGACCACGGTGCTG...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTTGGCAGGAGGCCCATTaGTCAGCACCGTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPWQEAH*SAPWSV
Trigger: CACTGACCACGGTGCTGACCAATGGGCCTCCTGCCA...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGTGGCAGGAGGCCCATTaGTCAGCACCGTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: ALPSNLAGGRQARLKKGEWQEAH*SAPWSV
Trigger: CACTGACCACGGTGCTGACCAATGGGCCTCCTGCCA...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTGCCACCTGGCTGTCTTaGAAACTGGCGTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPATWLS*KLAFRG
Trigger: CCCCCTGAACGCCAGTTTCCAAGACAGCCAGGTGGC...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GTCCCTGAGGAGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTGCCCCAGCCAGAAGTTaGGGGAGGCCACTGAGAATC +
Preference number: 4 (lower is better)
Translates to: VPEERIFPNVHAHQSVPTAPARS*GRPLRI
Trigger: GATTCTCAGTGGCCTCCCCCAACTTCTGGCTGGGGC...AGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CAA 72 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTaGGTGAAGGAGTCAGGGTTAGGTGTGAAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVF*VKESGLGVKVG
Trigger: TCCCACTTTCACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGGCATTTCGGAGGTACTaGAGATCTGCTTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGAFRRY*RSASHP
Trigger: TGGATGAGAAGCAGATCTTCAGTACCTCCGAAATGC...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTAGCCTGACTGCAAGGTaGCTGTGGTTGCTAACACGG +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCSLTAR*LWLLTR
Trigger: CCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCT...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGGAGTTGCAGGCAGGCTaGGCAGCAGAAACCATGTGG +
Preference number: 4 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFEELQAG*AAETMW
Trigger: CCACATGGTTTCTGCTGCTCAGCCTGCCTGCAACTC...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTGTTGGAAGTGGTAGGTaGAGAACCAGCCCCGGAAAG +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCVGSGR*RTSPGK
Trigger: CTTTCCGGGGCTGGTTCTTCACCTACCACTTCCAAC...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR GCA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTCTTGACCTGGCCCTCTaGTGGAGAGACGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPLDLAL*WRDEHG
Trigger: ACCATGCTCGTCTCTCCAGCAGAGGGCCAGGTCAAG...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAACTTGACCCTAGGGGCTaGTGTAGTGCCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GRGEEIQAIGLGVGFERELDPRG*CSARSP
Trigger: AGGACTTCTGGCACTACAGCAGCCCCTAGGGTCAAG...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCGGGGGTGGAGAGAGCTaGAGTAGGTGGTGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLGGGES*SRWWPK
Trigger: CTTAGGCCACCACCTACTCCAGCTCTCTCCACCCCC...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGAGAGAATGCCCCTCCTaGTCACTAGTGTCACCCGCC +
Preference number: 4 (lower is better)
Translates to: ALPSNLAGGRQARLKKGERECPS*SLVSPA
Trigger: GGCGGGTGACACTAGTGACCAGGAGGGGCATTCTCT...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTCAGCACCGTGGTCAGTaGGATCGTCTGCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTQHRGQ*DRLQGQ
Trigger: CTGACCCTGCAGACGATCCCACTGACCACGGTGCTG...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAGCCACCTGGCTGTCTTaGAAACTGGCGTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: FPWLTFLSLALKLGRREAATWLS*KLAFRG
Trigger: CCCCCTGAACGCCAGTTTCCAAGACAGCCAGGTGGC...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGTGGGTGGCGCCGGGTTaGTCGGACGGTTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKWVAPG*SDGWPQ
Trigger: CTGGGGCCAACCGTCCGACCAACCCGGCGCCACCCA...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCCCCTGTGACCGTGGGTaGCGCCGGGTTGGTCGGACG +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLPCDRG*RRVGRT
Trigger: CGTCCGACCAACCCGGCGCCACCCACGGTCACAGGG...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp CCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCGAGCAGGAATGGGGGTaGACCCCATCTAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: PRFQPDCKVTVVANTANSEQEWG*TPSRSL
Trigger: CAGCGACCTAGATGGGGTCCACCCCCATTCCTGCTC...GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GTCCCTGAGGAGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTATCACAGAGGCAGGCTaGTCCGCCTTCGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: VPEERIFPNVHAHQSVPTITEAG*SAFEVS
Trigger: ACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGAT...AGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACATCACAGAGGCAGGCTaGTCCGCCTTCGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHITEAG*SAFEVS
Trigger: ACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGAT...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTCCTTGCCCTCAAACTTaGCAGGAGGGAGGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPPCPQT*QEGGKL
Trigger: GAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGG...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTGTTCAGCAGATTGCTaGAAATGTGAGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGCSADC*KCEPGA
Trigger: AGCTCCTGGCTCACATTTCCAGCAATCTGCTGAACA...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR TCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGACTGCCTTCCAGGATCTaGTCCTGCGTCATGCACAAG +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGLPSRI*SCVMHK
Trigger: CTTGTGCATGACGCAGGATCAGATCCTGGAAGGCAG...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTGGGGTCAGTGACAGGTaGGGTACTTCGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTGVSDR*GTSVAL
Trigger: AAGGGCAACCGAAGTACCTCACCTGTCACTGACCCC...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GGCAAACTCCAGGAAGAGTACCTTGGTCCAGCCAGTGAGGGCTGCTCCCAGAGCTGGAGACCGACATGCTaGATTTTTGGCTTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GKLQEEYLGPASEGCSQSWRPTC*IFGFSQ
Trigger: TTGGGAGAAGCCAAAAATTCAGCATGTCGGTCTCCA...GCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGGTACTCTTCCTGGAGTTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCCTGGTCCAGCCCCTGTaGCCGTGGGTGGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSLVQPL*PWVAPG
Trigger: ACCCGGCGCCACCCACGGTCACAGGGGCTGGACCAG...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAAGGGTCACACTTGCCCTaGCCCCTTTGCTTATATGTC +
Preference number: 4 (lower is better)
Translates to: GRGEEIQAIGLGVGFEREGSHLP*PLCLYV
Trigger: GACATATAAGCAAAGGGGTCAGGGCAAGTGTGACCC...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTGTATTGACATCCCACTaGAATGCAGGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCVLTSH*NAGAGV
Trigger: CACACCTGCCCCTGCATTTCAGTGGGATGTCAATAC...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTCCCTATCCCTGTGGCTaGTCCACGGAGACATACACA +
Preference number: 4 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPPYPCG*STETYT
Trigger: TGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGG...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCCCTATCCCTGTGGCTaGTCCACGGAGACATACACA +
Preference number: 4 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWPYPCG*STETYT
Trigger: TGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGG...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACAGCCTGACTGCAAGGTaGCTGTGGTTGCTAACACGG +
Preference number: 4 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHSLTAR*LWLLTR
Trigger: CCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCT...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGGAGTTGCAGGCAGGCTaGGCAGCAGAAACCATGTGG +
Preference number: 4 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKELQAG*AAETMW
Trigger: CCACATGGTTTCTGCTGCTCAGCCTGCCTGCAACTC...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTTGTGAAAGTGGGAGATaGGGGGCATTGGTACACCCA +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCCESGR*GALVHP
Trigger: TGGGTGTACCAATGCCCCTCATCTCCCACTTTCACA...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAGCGGTTGACATGGTGTaGGAGGTGGCCTCATTGTCA +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGAVDMV*EVASLS
Trigger: TGACAATGAGGCCACCTCGCACACCATGTCAACCGC...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ATCACAGAGGCAGGCTGGTCCGCCTTCGAGGTGAGTTGCAGGCAGGCTGAGCAGCCACTTTGGCCAGTATaGCTCTTTGGTAGTAGTATC +
Preference number: 4 (lower is better)
Translates to: ITEAGWSAFEVSCRQAEQPLWPV*LFGSSI
Trigger: GATACTACTACCAAAGAGGCATACTGGCCAAAGTGG...CTGCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp CCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCCTTGACCTGGCCCTCTaGTGGAGAGACGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: PRFQPDCKVTVVANTANSLDLAL*WRDEHG
Trigger: ACCATGCTCGTCTCTCCAGCAGAGGGCCAGGTCAAG...GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGTGTGGTAGGTGCCCATaGTTGAGCAGGAATGGGGGT +
Preference number: 4 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFECGRCP*LSRNGG
Trigger: ACCCCCATTCCTGCTCAAGCATGGGCACCTACCACA...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTTGTGGTAGGTGCCCATaGTTGAGCAGGAATGGGGGT +
Preference number: 4 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPCGRCP*LSRNGG
Trigger: ACCCCCATTCCTGCTCAAGCATGGGCACCTACCACA...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTGACCCTTTATCAAGATaGTTACTTTCAACCATCAGG +
Preference number: 4 (lower is better)
Translates to: GSHEEREVPRELLAADSRDPLSR*LLSTIR
Trigger: CCTGATGGTTGAAAGTAAGCATCTTGATAAAGGGTC...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR GCA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGGCAGTGAACCGAGATTaGACCACTGCACTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKAVNRD*TTALQP
Trigger: CGGCTGGAGTGCAGTGGTGCAATCTCGGTTCACTGC...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGCTCAAGGCTGCATTCTaGGCTGGACCAACCACAGGA +
Preference number: 4 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFELKAAF*AGPTTG
Trigger: TCCTGTGGTTGGTCCAGCCCAGAATGCAGCCTTGAG...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGGGGGGTGGAGAGAGCTaGAGTAGGTGGTGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: DCKVTVVANTANSRKSTLGGGES*SRWWPK
Trigger: CTTAGGCCACCACCTACTCCAGCTCTCTCCACCCCC...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp GTCCCTGAGGAGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTCTCCACGATCACAGCTaGGAACACAGAGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VPEERIFPNVHAHQSVPTLHDHS*EHRGVF
Trigger: GAAGACCCCTCTGTGTTCCCAGCTGTGATCGTGGAG...AGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCACTTCCGCGGTTGACATaGTGTGCGAGGTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: FPWLTFLSLALKLGRREALPRLT*CARWPH
Trigger: ATGAGGCCACCTCGCACACCATGTCAACCGCGGAAG...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTCTTCCGCGGTTGACATaGTGTGCGAGGTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTLPRLT*CARWPH
Trigger: ATGAGGCCACCTCGCACACCATGTCAACCGCGGAAG...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAATGCAGGGTCCGAGTCTaGAAGCATTTCGGAGGTACT +
Preference number: 4 (lower is better)
Translates to: GRGEEIQAIGLGVGFERECRVRV*KHFGGT
Trigger: AGTACCTCCGAAATGCTTCCAGACTCGGACCCTGCA...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATATTCGCCGGGTGGTACTaGCAGAGGCCACAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GHSKGPQALIHITQSHQIFAGWY*QRPQRP
Trigger: CGGCCTCTGTGGCCTCTGCCAGTACCACCCGGCGAA...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCGGGGCCACTCCTAGGTaGATGTTGCTGGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLGATPR*MLLGTE
Trigger: TTCAGTGCCCAGCAACATCCACCTAGGAGTGGCCCC...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGAGGGAGCCCAGGATCGGGCCTGGGGCTGCCACCTaGCTGTCTTGGAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: CLTAGKCQKVIKREPRIGPGAAT*LSWKLA
Trigger: CGCCAGTTTCCAAGACAGCCAGGTGGCAGCCCCAGG...CCCGATCCTGGGCTCCCTCTTGATTACTTTTTGACATTTTCCAGCTGTCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGAGGGAGCCCAGGATCGGGGGAGGAGGACCTCAGTaGCCCCTCCTTGACCCTAGG +
Preference number: 4 (lower is better)
Translates to: CLTAGKCQKVIKREPRIGGGGPQ*PLLDPR
Trigger: CCTAGGGTCAAGGAGGGGCCACTGAGGTCCTCCTCC...CCCGATCCTGGGCTCCCTCTTGATTACTTTTTGACATTTTCCAGCTGTCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAATCCTTCAGCAAACAACAGTGGGGCGGCTaGGAGGAGACAAAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: WLALRLEGTSSPSKSFSKQQWGG*EETKSG
Trigger: ACCAGACTTTGTCTCCTCCCAGCCGCCCCACTGTTG...TTTGCTGAAGGATTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGCTCAAGTTCAGCCACTaGGGTCAGCCCAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKLKFSH*GQPNSG
Trigger: CCCACTGTTGGGCTGACCCCAGTGGCTGAACTTGAG...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATATGCTTGAGCAGGAATaGGGGTGGACCCCATCTAGG +
Preference number: 4 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNMLEQE*GWTPSR
Trigger: CCTAGATGGGGTCCACCCCCATTCCTGCTCAAGCAT...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACATGCTTGAGCAGGAATaGGGGTGGACCCCATCTAGG +
Preference number: 4 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHMLEQE*GWTPSR
Trigger: CCTAGATGGGGTCCACCCCCATTCCTGCTCAAGCAT...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAATGCTTGAGCAGGAATaGGGGTGGACCCCATCTAGG +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGMLEQE*GWTPSR
Trigger: CCTAGATGGGGTCCACCCCCATTCCTGCTCAAGCAT...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAATCCTTCAGCAAAATCACAGAGGCAGGCTaGTCCGCCTTCGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: WLALRLEGTSSPSKSFSKITEAG*SAFEVS
Trigger: ACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGAT...TTTGCTGAAGGATTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACGGAGATGAGGGGCATTaGTACACCCAAGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHGDEGH*YTQGGL
Trigger: CAGACCTCCTTGGGTGTACCAATGCCCCTCATCTCC...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ATCACAGAGGCAGGCTGGTCCGCCTTCGAGGTGAGTTGCAGGCAGGCTGAGCAGGTTAGGTCAAGTGGATaGTTCTGTACCAAGGACACA +
Preference number: 4 (lower is better)
Translates to: ITEAGWSAFEVSCRQAEQVRSSG*FCTKDT
Trigger: TGTGTCCTTGGTACAGAACCATCCACTTGACCTAAC...CTGCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTAGGTCCCGTCTGTTATaGTGCCATTGTGAACGTCGT +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCRSRLL*CHCERR
Trigger: ACGACGTTCACAATGGCATCATAACAGACGGGACCT...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TGGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAATCCTTCAGCAAACTCTGGAGAACGAGCTaGGTGGGAGCAGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: WLALRLEGTSSPSKSFSKLWRTS*VGAVVL
Trigger: CAGTACTACTGCTCCCACTCAGCTCGTTCTCCAGAG...TTTGCTGAAGGATTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCAGCCGCAGTGATGCCTaGCAGCTGGAAAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: KRRARARPGEVVRSSGWFSRSDA*QLENVK
Trigger: TTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCT...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGGGTCCGCCTTCGAGGTaGGTTGCAGGCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKGPPSR*VAGRLS
Trigger: GCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACC...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACTGTGAAAGTGGGAGATaGGGGGCATTGGTACACCCA +
Preference number: 4 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHCESGR*GALVHP
Trigger: TGGGTGTACCAATGCCCCTCATCTCCCACTTTCACA...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTAGTTGTTTCCGTGGCTaGCATTTCTTAGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCSCFRG*HFLALP
Trigger: GGGCAAGGCTAAGAAATGTCAGCCACGGAAACAACT...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAATCTGATCCTGCGTCATaGACAAGGTCCCGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: GRGEEIQAIGLGVGFERESDPAS*TRSRLL
Trigger: TAACAGACGGGACCTTGTGCATGACGCAGGATCAGA...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAACCCACAGATAGATGGTaGTGCCTTTGCCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: GRGEEIQAIGLGVGFEREPTDRW*CLCHPL
Trigger: CAAAGGATGGCAAAGGCAGCACCATCTATCTGTGGG...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTTGGTACACCAGCCTCTaGCCTTCCACTTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTWYTSL*PSTLAS
Trigger: ACTGGCCAAAGTGGAAGGGCAGAGGCTGGTGTACCA...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCCTGCTGTGGCTTCGCTaGTCTCATCCTCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: KRRARARPGEVVRSSGWFLLWLR*SHPHLQ
Trigger: TTGAAGATGAGGATGAGAGCAGCGAAGCCACAGCAG...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGGGCCTGAGGTGGGGCTaGTGTGGCTTCGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKGLRWG*CGFAAL
Trigger: GAGAGCAGCGAAGCCACAGCAGCCCCACCTCAGGCC...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTGAGACAAAGTCTGGTTaGCCAGAAGGCTCGGATTGT +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCETKSG*PEGSDC
Trigger: ACAATCCGAGCCTTCTGGGCAACCAGACTTTGTCTC...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCCTGGCCACAAACTTCTaGCTGGCTCAAGGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KRRARARPGEVVRSSGWFLATNF*LAQGFF
Trigger: GAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAG...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTACGGGAACTCCTGGCTaGCGACTCCCGTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: FPSITKSARYAAKSICPSTGTPG*RLPSSW
Trigger: CCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGT...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCTTGAAGGCCATAACGGGAACTCCTGGCTaGCGACTCCCGTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SQPVMLPKAYALVLLKAITGTPG*RLPSSW
Trigger: CCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGT...TATGGCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTCACAACCAAACACAGTaGCCTCCAGGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FPSITKSARYAAKSICPSHNQTQ*PPGGRE
Trigger: CTCCCTGCCCCCTGGAGGGCACTGTGTTTGGTTGTG...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAATCCTTCAGCAAAAGCCCTCCAGAGCTGTaGGGCTTTCTTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: WLALRLEGTSSPSKSFSKSPPEL*GFLDEG
Trigger: CCCTTCATCAAGAAAGCCCCACAGCTCTGGAGGGCT...TTTGCTGAAGGATTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTACATGGTGTGCGAGGTaGCCTCATTGTCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCTWCAR*PHCHLS
Trigger: TGACAGATGACAATGAGGCCACCTCGCACACCATGT...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACGGCATCTCCTTAAACTaGTACACCAGCCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHGISLN*YTSLCP
Trigger: AGGGCAGAGGCTGGTGTACCAGTTTAAGGAGATGCC...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGAGCTGGTTCGCCGGGTaGTACTGGCAGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLSWFAG*YWQRPQ
Trigger: CTGTGGCCTCTGCCAGTACCACCCGGCGAACCAGCT...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCTTGAAGGCCATAATGAGACCCTGGAGCTaGTTCGCCGGGTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: SQPVMLPKAYALVLLKAIMRPWS*FAGWYW
Trigger: CCAGTACCACCCGGCGAACCAGCTCCAGGGTCTCAT...TATGGCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTATGAGACCCTGGAGCTaGTTCGCCGGGTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: FPSITKSARYAAKSICPSMRPWS*FAGWYW
Trigger: CCAGTACCACCCGGCGAACCAGCTCCAGGGTCTCAT...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp AGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCTTGAAGGCCATAATCTGGATGAGACCCTaGAGCTGGTTCGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SQPVMLPKAYALVLLKAIIWMRP*SWFAGW
Trigger: CCACCCGGCGAACCAGCTCCAGGGTCTCATCCAGAT...TATGGCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTATCTGGATGAGACCCTaGAGCTGGTTCGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: FPSITKSARYAAKSICPSIWMRP*SWFAGW
Trigger: CCACCCGGCGAACCAGCTCCAGGGTCTCATCCAGAT...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTGACATGCTGAATTTTTaGCTTCTCCCAAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SHEEREVPRELLAADSRLDMLNF*LLPRRA
Trigger: AGCTCTTCTTGGGAGAAGCCAAAAATTCAGCATGTC...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAATCCTTCAGCAAACATTGGTCAGCACCGTaGTCAGTGGGATCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: WLALRLEGTSSPSKSFSKHWSAP*SVGSSA
Trigger: TGCAGACGATCCCACTGACCACGGTGCTGACCAATG...TTTGCTGAAGGATTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGGAAAGTAGAGGCCGCTaGAACACTCTGGAGAACGAG +
Preference number: 4 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWESRGR*NTLENE
Trigger: CTCGTTCTCCAGAGTGTTCCAGCGGCCTCTACTTTC...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGGAAAGTAGAGGCCGCTaGAACACTCTGGAGAACGAG +
Preference number: 4 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFEESRGR*NTLENE
Trigger: CTCGTTCTCCAGAGTGTTCCAGCGGCCTCTACTTTC...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATACCTGGGGCTGCCACCTaGCTGTCTTGGAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: GHSKGPQALIHITQSHQIPGAAT*LSWKLA
Trigger: CGCCAGTTTCCAAGACAGCCAGGTGGCAGCCCCAGG...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCTTGAAGGCCATAGCCCCAGCCAGAAGTTaGGGGAGGCCACTGAGAATC +
Preference number: 4 (lower is better)
Translates to: SQPVMLPKAYALVLLKAIAPARS*GRPLRI
Trigger: GATTCTCAGTGGCCTCCCCCAACTTCTGGCTGGGGC...TATGGCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCGGAGGAGGACCTCAGTaGCCCCTCCTTGACCCTAGG +
Preference number: 4 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGGGGPQ*PLLDPR
Trigger: CCTAGGGTCAAGGAGGGGCCACTGAGGTCCTCCTCC...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAGGAAACCACCTGGGTTaGAAGTGGCTGAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGGNHLG*KWLKMS
Trigger: GCTCATCTTCAGCCACTTCCAACCCAGGTGGTTTCC...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGAGAAGGCTCGGATTGTaGGAACCCCTGGAAACCACC +
Preference number: 4 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKRRLGL*EPLETT
Trigger: GGTGGTTTCCAGGGGTTCCCACAATCCGAGCCTTCT...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGAAGGCTCGGATTGTaGGAACCCCTGGAAACCACC +
Preference number: 4 (lower is better)
Translates to: FPWLTFLSLALKLGRREARRLGL*EPLETT
Trigger: GGTGGTTTCCAGGGGTTCCCACAATCCGAGCCTTCT...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAGGAGGAGACAAAGTCTaGTTGCCCAGAAGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: FPWLTFLSLALKLGRREAGGDKV*LPRRLG
Trigger: TCCGAGCCTTCTGGGCAACCAGACTTTGTCTCCTCC...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTGGAAGTAGGGTTGAATaGGGAGAAAGGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTGSRVE*GERGWG
Trigger: ACCCCAGCCCCTTTCTCCCCATTCAACCCTACTTCC...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTCTGCTCAATTTTGCCTaGTGGGTCACACTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPLLNFA*WVTLAL
Trigger: CAGGGCAAGTGTGACCCACCAGGCAAAATTGAGCAG...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAATTCAGCAAAGCACTTTaGGGTGGCCCAAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: GRGEEIQAIGLGVGFEREFSKAL*GGPRFQ
Trigger: CTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACTGCCACGGGAACTCCTaGCTGCCGACTCCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: YQGHSKGPQALIHITQSHCHGNS*LPTPVF
Trigger: GAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTAGCAATGAGTTTCCATaGAGTTGGAGTAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCSNEFP*SWSRGG
Trigger: GCCACCCCTACTCCAACTCCATGGAAACTCATTGCT...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCAGAGCCCAGCTAGTGTaGGCTCACGGGGGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLRAQLV*AHGGPR
Trigger: TCTCGGGCCCCCGTGAGCCCACACTAGCTGGGCTCT...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR TCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGTGGGAGACTCCATATTaGGTAAGACTTCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFEWETPY*VRLPRL
Trigger: CAACCGCGGAAGTCTTACTCAATATGGAGTCTCCCA...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGTAGTTGGGCAGAGTaGCAGCTGGTGCAGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLGSWAE*QLVQGP
Trigger: CGGACCCTGCACCAGCTGTCACTCTGCCCAACTACC...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGTTGGGGGAGGCCACTaGGAATCAGTGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLVGGGH*ESVEPL
Trigger: CAGGGGCTCCACTGATTCTCAGTGGCCTCCCCCAAC...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGGTTGGGGGAGGCCACTaGGAATCAGTGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKVGGGH*ESVEPL
Trigger: CAGGGGCTCCACTGATTCTCAGTGGCCTCCCCCAAC...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCGGCCTTTGTGTCCCTaGGGAGCGCATCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: YQGHSKGPQALIHITQSHRPLCP*GAHLPQ
Trigger: TTGGGGAAGATGCGCTCCTCAGGGACACAAAGGCCG...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCCGGCCTTTGTGTCCCTaGGGAGCGCATCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGRPLCP*GAHLPQ
Trigger: TTGGGGAAGATGCGCTCCTCAGGGACACAAAGGCCG...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGAGCCGCAGTGATGCCTaGCAGCTGGAAAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: ALPSNLAGGRQARLKKGESRSDA*QLENVK
Trigger: TTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCT...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTTGTGAAAGTGGGAGATaGGGGGCATTGGTACACCCA +
Preference number: 4 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTCESGR*GALVHP
Trigger: TGGGTGTACCAATGCCCCTCATCTCCCACTTTCACA...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGTTCTCCTCCAGAGAATaGCCCTCCTGGTCACTAGTG +
Preference number: 4 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKFSSRE*PSWSLV
Trigger: CACTAGTGACCAGGAGGGGCATTCTCTGGAGGAGAA...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCGTGAGGTACTTCGGTTaGCCTTGGTCTTCCGGATTC +
Preference number: 4 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLVRYFG*PWSSGF
Trigger: GAATCCGGAAGACCAAGGGCAACCGAAGTACCTCAC...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTCAGGTGTTTCTGTCTTaGAGAAGAGCCAGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPQVFLS*RRARRN
Trigger: GTTCCTCCTGGCTCTTCTGCAAGACAGAAACACCTG...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATTCAGGCTTGTTTTTCTaGTTCCCCCACAGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNSGLFF*FPHSLD
Trigger: GTCCAAGCTGTGGGGGAAGCAGAAAAACAAGCCTGA...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGTCAGGCTTGTTTTTCTaGTTCCCCCACAGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ALPSNLAGGRQARLKKGESGLFF*FPHSLD
Trigger: GTCCAAGCTGTGGGGGAAGCAGAAAAACAAGCCTGA...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AAAATGAGCCCAAAATGGATGAGATTCTTGAACAGCCACGTTGGAAGTGGTAGGGGCCTGAGGTGGGGCTaGTGTGGCTTCGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KMSPKWMRFLNSHVGSGRGLRWG*CGFAAL
Trigger: GAGAGCAGCGAAGCCACAGCAGCCCCACCTCAGGCC...CCTACCACTTCCAACGTGGCTGTTCAAGAATCTCATCCATTTTGGGCTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR GCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTAGGGGGAAAGAGGCCTaGAAAGTGAAGGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTRGKEA*KVKVSL
Trigger: CAAGGACACCTTCACTTTGCAGGCCTCTTTCCCCCT...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGGAGACAAAGTCTGGTTaGCCAGAAGGCTCGGATTGT +
Preference number: 4 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWETKSG*PEGSDC
Trigger: ACAATCCGAGCCTTCTGGGCAACCAGACTTTGTCTC...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp CCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCCTGGTGGGTCACACTTaGCCTGACCCCTTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: PRFQPDCKVTVVANTANSLVGHT*PDPFAY
Trigger: ATAAGCAAAGGGGTCAGGGCAAGTGTGACCCACCAG...GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTAATGCTGCTCAATTTTaGCTGGTGGGTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCNAAQF*LVGHTC
Trigger: GCAAGTGTGACCCACCAGGCAAAATTGAGCAGCATT...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCGACATCCCACTGAAATaGAGGGGCAGGTGTGCTACT +
Preference number: 4 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLDIPLK*RGRCAT
Trigger: AGTAGCACACCTGCCCCTGCATTTCAGTGGGATGTC...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGACAAGTCAGCCCGTTATaGTGCCAAAAGCATATGCCC +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGQVSPL*CQKHMP
Trigger: GGGCATATGCTTTTGGCAGCATAACGGGCTGACTTG...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATCTGGCCACAAACTTCTaGCTGGCTCAAGGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNLATNF*LAQGFF
Trigger: GAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAG...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATGCATCTTCCCCAATGTaGATGCGCATCAAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNASSPM*MRIKAF
Trigger: GAACGCTTTGATGCGCATGCACATTGGGGAAGATGC...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAAGATTCCAGCCTGACTaGAAGGTGACTGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGRFQPD*KVTVVA
Trigger: AGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCT...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GCCGGACTAGCCGCAGTGATGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAACCCCATCTAGGTCGCTaGCGGACTAGCCGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: AGLAAVMPDSWKMSKSNQPHLGR*RTSRSD
Trigger: ATCACTGCGGCTAGTCCGGCAGCGACCTAGATGGGG...TTGATTACTTTTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCTAGTCCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTAAACCATGTGGTAGGTaGCCATGCTTGAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCKPCGR*PCLSRN
Trigger: ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTT...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GCCGGACTAGCCGCAGTGATGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGCCTTCGAGGTGAGTTaGAGGCAGGCTGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGLAAVMPDSWKMSKSNQAFEVS*RQAEQQ
Trigger: CTGCTGCTCAGCCTGCCTGCAACTCACCTCGAAGGC...TTGATTACTTTTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCTAGTCCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCAATACCCAGGTACTTTaGAGCCTAGAGCCTACCCCC +
Preference number: 4 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLNTQVL*SLEPTP
Trigger: GGGGGTAGGCTCTAGGCTCCAAAGTACCTGGGTATT...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCGGGTCTTCCAGCTGGTaGATATCATCATCCATCCCG +
Preference number: 4 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLGSSSW*ISSSIP
Trigger: CGGGATGGATGATGATATCCACCAGCTGGAAGACCC...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAGAGGGGTCTTCCAGCTaGTGGATATCATCATCCATC +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGEGSSS*WISSSI
Trigger: GATGGATGATGATATCCACCAGCTGGAAGACCCCTC...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAACATGGTGTGCGAGGTaGCCTCATTGTCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGTWCAR*PHCHLS
Trigger: TGACAGATGACAATGAGGCCACCTCGCACACCATGT...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGGCAGAGTGACAGCTaGTGCAGGGTCCGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLGQSDS*CRVRVW
Trigger: CCAGACTCGGACCCTGCACCAGCTGTCACTCTGCCC...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGAGGGAGCCCAGGATCGGGAGAGAATGCCCCTCCTaGTCACTAGTGTCACCCGCC +
Preference number: 4 (lower is better)
Translates to: CLTAGKCQKVIKREPRIGRECPS*SLVSPA
Trigger: GGCGGGTGACACTAGTGACCAGGAGGGGCATTCTCT...CCCGATCCTGGGCTCCCTCTTGATTACTTTTTGACATTTTCCAGCTGTCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTCCTACTCTGCACTCGTTCCAGCTCTACAACATCTCCAGATTCGGAGGATCAAGACCTGGCCCTCTGCTaGAGAGACGAGCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: FLLCTRSSSTTSPDSEDQDLALC*RDEHGG
Trigger: TCCACCATGCTCGTCTCTCCAGCAGAGGGCCAGGTC...TTGATCCTCCGAATCTGGAGATGTTGTAGAGCTGGAACGAGTGCAGAGTAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGACTAGGTGGATGTTGCTaGGCACTGAAGATGCACTCA +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGLGGCC*ALKMHS
Trigger: TGAGTGCATCTTCAGTGCCCAGCAACATCCACCTAG...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGGGAAACCACCTGGGTTaGAAGTGGCTGAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKGNHLG*KWLKMS
Trigger: GCTCATCTTCAGCCACTTCCAACCCAGGTGGTTTCC...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp CCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCGATTGTGGGAACCCCTaGAAACCACCTGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: PRFQPDCKVTVVANTANSDCGNP*KPPGLE
Trigger: TTCCAACCCAGGTGGTTTCCAGGGGTTCCCACAATC...GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCTTGAAGGCCATACAACAGTGGGGCGGCTaGGAGGAGACAAAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SQPVMLPKAYALVLLKAIQQWGG*EETKSG
Trigger: ACCAGACTTTGTCTCCTCCCAGCCGCCCCACTGTTG...TATGGCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCCTGCTCAATTTTGCCTaGTGGGTCACACTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLLLNFA*WVTLAL
Trigger: CAGGGCAAGTGTGACCCACCAGGCAAAATTGAGCAG...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCACTGCTCAATTTTGCCTaGTGGGTCACACTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: FPWLTFLSLALKLGRREALLNFA*WVTLAL
Trigger: CAGGGCAAGTGTGACCCACCAGGCAAAATTGAGCAG...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTCCGCCAATGGCAAGTTaGAGGGAGAGATGCAAATAC +
Preference number: 4 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPPPMAS*RERCKY
Trigger: GTATTTGCATCTCTCCCTCCAACTTGCCATTGGCGG...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335997.11
CDS-3UTR CCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGGAGCTGCCCTTGCCCTaGGGGGCAGATCTGGATGAC +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKELPLP*GADLDD
Trigger: GTCATCCAGATCTGCCCCCCAGGGCAAGGGCAGCTC...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615377.4
CDS-3UTR TCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGGTCTTTTCAGAGAGCTaGCAACGGGATTATCAGAGC +
Preference number: 4 (lower is better)
Translates to: ALPSNLAGGRQARLKKGEVFSES*QRDYQS
Trigger: GCTCTGATAATCCCGTTGTCAGCTCTCTGAAAAGAC...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGGTCCCGTCTGTTATaGTGCCATTGTGAACGTCGT +
Preference number: 4 (lower is better)
Translates to: FPWLTFLSLALKLGRREARSRLL*CHCERR
Trigger: ACGACGTTCACAATGGCATCATAACAGACGGGACCT...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GTCCCTGAGGAGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTGCATTTCGGAGGTACTaGAGATCTGCTTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: VPEERIFPNVHAHQSVPTAFRRY*RSASHP
Trigger: TGGATGAGAAGCAGATCTTCAGTACCTCCGAAATGC...AGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGGGGGTCAGTGACAGGTaGGGTACTTCGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GNTHSKYICTTKHSALQGGVSDR*GTSVAL
Trigger: AAGGGCAACCGAAGTACCTCACCTGTCACTGACCCC...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
52% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GTCCCTGAGGAGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTTGGGGTCAAGTGTATTaGCATCCCACTGAAATGCAG +
Preference number: 4 (lower is better)
Translates to: VPEERIFPNVHAHQSVPTWGQVY*HPTEMQ
Trigger: CTGCATTTCAGTGGGATGTCAATACACTTGACCCCA...AGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCCCTTGGTCCAGCCAGTaGGGGCTGCTCCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSPWSSQ*GLLPEL
Trigger: CAGCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGG...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGGGCACAAATACTCAATaGATTCAGCTCTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFEGTNTQ*IQLWGL
Trigger: AAGCCCCCAGAGCTGAATTCATTGAGTATTTGTGCC...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGGGCACAAATACTCAATaGATTCAGCTCTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: ALPSNLAGGRQARLKKGEGTNTQ*IQLWGL
Trigger: AAGCCCCCAGAGCTGAATTCATTGAGTATTTGTGCC...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AATGTGAGCCAGGAGCTTAAGAGAAAGGTTGGGACTGGAGCTCTAGATTTAGGAGTAGGTGCCCATGCTTaGGCAGGAATGGGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: NVSQELKRKVGTGALDLGVGAHA*AGMGVD
Trigger: GTCCACCCCCATTCCTGCTCAAGCATGGGCACCTAC...TCCTAAATCTAGAGCTCCAGTCCCAACCTTTCTCTTAAGCTCCTGGCTCACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR GCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGAGTGACAGCTGGTaGAGGGTCCGAGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: YQGHSKGPQALIHITQSHQSDSW*RVRVWK
Trigger: CTTCCAGACTCGGACCCTGCACCAGCTGTCACTCTG...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGCTTGACCTGGCCCTCTaGTGGAGAGACGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: GNTHSKYICTTKHSALQGLDLAL*WRDEHG
Trigger: ACCATGCTCGTCTCTCCAGCAGAGGGCCAGGTCAAG...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGGACATCCCACTGAAATaGAGGGGCAGGTGTGCTACT +
Preference number: 4 (lower is better)
Translates to: DCKVTVVANTANSRKSTLDIPLK*RGRCAT
Trigger: AGTAGCACACCTGCCCCTGCATTTCAGTGGGATGTC...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAGCTGCCAAAAGCATATaGCCTAGTGCTCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: FPWLTFLSLALKLGRREAAAKSI*PSALEG
Trigger: GCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGC...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGCAAGTCAGCCCGTTATaGTGCCAAAAGCATATGCCC +
Preference number: 4 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKQVSPL*CQKHMP
Trigger: GGGCATATGCTTTTGGCAGCATAACGGGCTGACTTG...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAAAGCGTTCCTACTCTaGACTCGTTCCAGCTCTACA +
Preference number: 4 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFEKAFLL*TRSSST
Trigger: TGTAGAGCTGGAACGAGTGCAGAGTAGGAACGCTTT...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTCTTCCCCAATGTGCATaGGCATCAAAGCGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTLPQCA*ASKRSY
Trigger: GTAGGAACGCTTTGATGCGCATGCACATTGGGGAAG...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCCTTCCCCAATGTGCATaGGCATCAAAGCGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLLPQCA*ASKRSY
Trigger: GTAGGAACGCTTTGATGCGCATGCACATTGGGGAAG...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGCACAACCAAACACAGTaGCCTCCAGGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKHNQTQ*PPGGRE
Trigger: CTCCCTGCCCCCTGGAGGGCACTGTGTTTGGTTGTG...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGGGGTCTTCCAGCTGGTaGATATCATCATCCATCCCG +
Preference number: 4 (lower is better)
Translates to: DCKVTVVANTANSRKSTLGSSSW*ISSSIP
Trigger: CGGGATGGATGATGATATCCACCAGCTGGAAGACCC...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCCGGACTAGCCGCAGTGATGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAACTTCCGCGGTTGACATaGTGTGCGAGGTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: AGLAAVMPDSWKMSKSNQLPRLT*CARWPH
Trigger: ATGAGGCCACCTCGCACACCATGTCAACCGCGGAAG...TTGATTACTTTTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCTAGTCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCGTGGAGGCCTGAGGTaGGGCTGCTGTGGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVRGGLR*GCCGFA
Trigger: AGCGAAGCCACAGCAGCCCCACCTCAGGCCTCCACG...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCTTGGTGAGCTTGACCTaGCCCTCTGCTGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGLVSLT*PSAGET
Trigger: CGTCTCTCCAGCAGAGGGCCAGGTCAAGCTCACCAA...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGCAGCACCGTGGTCAGTaGGATCGTCTGCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKQHRGQ*DRLQGQ
Trigger: CTGACCCTGCAGACGATCCCACTGACCACGGTGCTG...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AAAATGAGCCCAAAATGGATGAGATTCTTGAACAGCCACGTTGGAAGTGGTAGGCCTGGGGCTGCCACCTaGCTGTCTTGGAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: KMSPKWMRFLNSHVGSGRPGAAT*LSWKLA
Trigger: CGCCAGTTTCCAAGACAGCCAGGTGGCAGCCCCAGG...CCTACCACTTCCAACGTGGCTGTTCAAGAATCTCATCCATTTTGGGCTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CCA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGGAGGAGACAAAGTCTaGTTGCCCAGAAGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: FPSITKSARYAAKSICPSGGDKV*LPRRLG
Trigger: TCCGAGCCTTCTGGGCAACCAGACTTTGTCTCCTCC...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCCAACAGTGGGGCGGCTaGGAGGAGACAAAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGQQWGG*EETKSG
Trigger: ACCAGACTTTGTCTCCTCCCAGCCGCCCCACTGTTG...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGCTCAAGTTCAGCCACTaGGGTCAGCCCAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLLKFSH*GQPNSG
Trigger: CCCACTGTTGGGCTGACCCCAGTGGCTGAACTTGAG...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCCGGACTAGCCGCAGTGATGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAACTCAAGTTCAGCCACTaGGGTCAGCCCAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: AGLAAVMPDSWKMSKSNQLKFSH*GQPNSG
Trigger: CCCACTGTTGGGCTGACCCCAGTGGCTGAACTTGAG...TTGATTACTTTTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCTAGTCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCCCACAAACTTCTGCCTaGCTCAAGGCTTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLPQTSA*LKAFSL
Trigger: GAGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGG...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATACATACACACACCCTTaGAGACAAGACCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNTYTHP*RQDLTA
Trigger: AGCTGTGAGGTCTTGTCTCCAAGGGTGTGTGTATGT...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACACATACACACACCCTTaGAGACAAGACCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHTYTHP*RQDLTA
Trigger: AGCTGTGAGGTCTTGTCTCCAAGGGTGTGTGTATGT...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCCGGACTAGCCGCAGTGATGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAACCTTCCCTCCCTTCGTaGTTTTACCCCACTCGGCCT +
Preference number: 4 (lower is better)
Translates to: AGLAAVMPDSWKMSKSNQPSLPS*FYPTRP
Trigger: AGGCCGAGTGGGGTAAAACCACGAAGGGAGGGAAGG...TTGATTACTTTTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCTAGTCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCGAGTTTCCATGGAGTTaGAGTAGGGGTGGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLEFPWS*SRGGRN
Trigger: GTTTCTGCCACCCCTACTCCAACTCCATGGAAACTC...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CCA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTTTAAAAATCCATTGTTaGCCAGCCGTGGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCLKIHC*PAVVAH
Trigger: GTGAGCAACCACGGCTGGCCAACAATGGATTTTTAA...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR TCA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGCTGCCTTCCAGGATCTaGTCCTGCGTCATGCACAAG +
Preference number: 4 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLLPSRI*SCVMHK
Trigger: CTTGTGCATGACGCAGGATCAGATCCTGGAAGGCAG...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCGCATTTCGGAGGTACTaGAGATCTGCTTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLAFRRY*RSASHP
Trigger: TGGATGAGAAGCAGATCTTCAGTACCTCCGAAATGC...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGCTCTGGAGAACGAGCTaGGTGGGAGCAGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLLWRTS*VGAVVL
Trigger: CAGTACTACTGCTCCCACTCAGCTCGTTCTCCAGAG...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TTCCTACTCTGCACTCGTTCCAGCTCTACAACATCTCCAGATTCGGAGGATCAACTCTGGAGAACGAGCTaGGTGGGAGCAGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: FLLCTRSSSTTSPDSEDQLWRTS*VGAVVL
Trigger: CAGTACTACTGCTCCCACTCAGCTCGTTCTCCAGAG...TTGATCCTCCGAATCTGGAGATGTTGTAGAGCTGGAACGAGTGCAGAGTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp CCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCGGCACAAATACTCAATaGATTCAGCTCTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: PRFQPDCKVTVVANTANSGTNTQ*IQLWGL
Trigger: AAGCCCCCAGAGCTGAATTCATTGAGTATTTGTGCC...GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAAGGTCCTCAGGCACTaGTTCACATTACCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: FPWLTFLSLALKLGRREAKVLRH*FTLPKV
Trigger: GACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTT...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AATGTGAGCCAGGAGCTTAAGAGAAAGGTTGGGACTGGAGCTCTAGATTTAGGAGGCAGGAGAATCACTTaGGCCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: NVSQELKRKVGTGALDLGGRRIT*AWEAEV
Trigger: AACCTCTGCCTCCCAGGCTCAAGTGATTCTCCTGCC...TCCTAAATCTAGAGCTCCAGTCCCAACCTTTCTCTTAAGCTCCTGGCTCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR GCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGCATCATCCATCCCGTTaGTTGCGAACTCAAAGATCA +
Preference number: 4 (lower is better)
Translates to: ALPSNLAGGRQARLKKGEHHPSR*LRTQRS
Trigger: TGATCTTTGAGTTCGCAAGCAACGGGATGGATGATG...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGCAGAGTGACAGCTGGTaGAGGGTCCGAGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKQSDSW*RVRVWK
Trigger: CTTCCAGACTCGGACCCTGCACCAGCTGTCACTCTG...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGCCCACAGATAGATGGTaGTGCCTTTGCCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: DCKVTVVANTANSRKSTLPTDRW*CLCHPL
Trigger: CAAAGGATGGCAAAGGCAGCACCATCTATCTGTGGG...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GTCCCTGAGGAGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTCCACTTTGGCCAGTATaGCTCTTTGGTAGTAGTATC +
Preference number: 4 (lower is better)
Translates to: VPEERIFPNVHAHQSVPTPLWPV*LFGSSI
Trigger: GATACTACTACCAAAGAGGCATACTGGCCAAAGTGG...AGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTCTCCTAGGTGGATGTTaGTGGGCACTGAAGATGCAC +
Preference number: 4 (lower is better)
Translates to: FPSITKSARYAAKSICPSLLGGC*WALKMH
Trigger: GTGCATCTTCAGTGCCCAGCAACATCCACCTAGGAG...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGAGCTGGAGTAGGTGGTaGCCTAAGCCAGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKSWSRW*PKPGSR
Trigger: CCTTGAGCCTGGCTTAGGCCACCACCTACTCCAGCT...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGAGCCCTCCAGAGCTGTaGGGCTTTCTTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: GNTHSKYICTTKHSALQGSPPEL*GFLDEG
Trigger: CCCTTCATCAAGAAAGCCCCACAGCTCTGGAGGGCT...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATACTCCACGATCACAGCTaGGAACACAGAGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GHSKGPQALIHITQSHQILHDHS*EHRGVF
Trigger: GAAGACCCCTCTGTGTTCCCAGCTGTGATCGTGGAG...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGAGGGAGCCCAGGATCGGGTGCAGGGTCCGAGTCTaGAAGCATTTCGGAGGTACT +
Preference number: 4 (lower is better)
Translates to: CLTAGKCQKVIKREPRIGCRVRV*KHFGGT
Trigger: AGTACCTCCGAAATGCTTCCAGACTCGGACCCTGCA...CCCGATCCTGGGCTCCCTCTTGATTACTTTTTGACATTTTCCAGCTGTCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGGGCAGAGTGACAGCTaGTGCAGGGTCCGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSGQSDS*CRVRVW
Trigger: CCAGACTCGGACCCTGCACCAGCTGTCACTCTGCCC...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGGGCCACTCCTAGGTaGATGTTGCTGGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLGATPR*MLLGTE
Trigger: TTCAGTGCCCAGCAACATCCACCTAGGAGTGGCCCC...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAGGCTGTCTTGGAAACTaGCGTTCAGGGGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GHSKGPQALIHITQSHQIGCLGN*RSGGKR
Trigger: CCTCTTTCCCCCTGAACGCCAGTTTCCAAGACAGCC...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCCGGACTAGCCGCAGTGATGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGGCTGTCTTGGAAACTaGCGTTCAGGGGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: AGLAAVMPDSWKMSKSNQGCLGN*RSGGKR
Trigger: CCTCTTTCCCCCTGAACGCCAGTTTCCAAGACAGCC...TTGATTACTTTTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCTAGTCCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGAGAAGGCTCGGATTGTaGGAACCCCTGGAAACCACC +
Preference number: 4 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLRRLGL*EPLETT
Trigger: GGTGGTTTCCAGGGGTTCCCACAATCCGAGCCTTCT...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGAGGGAGCCCAGGATCGGGCAGGGATGCTTAAGCTaGGCACTGTTTGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: CLTAGKCQKVIKREPRIGQGCLS*ALFGHS
Trigger: ACTGTGGCCAAACAGTGCCCAGCTTAAGCATCCCTG...CCCGATCCTGGGCTCCCTCTTGATTACTTTTTGACATTTTCCAGCTGTCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTCAGGGATGCTTAAGCTaGGCACTGTTTGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: FPSITKSARYAAKSICPSQGCLS*ALFGHS
Trigger: ACTGTGGCCAAACAGTGCCCAGCTTAAGCATCCCTG...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTAAATCCCTATCCCTGTaGCTGATCCACGGAGACATA +
Preference number: 4 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTKSLSL*LIHGDI
Trigger: TATGTCTCCGTGGATCAGCCACAGGGATAGGGATTT...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AAAATGAGCCCAAAATGGATGAGATTCTTGAACAGCCACGTTGGAAGTGGTAGGGAGCAGGAATGGGGGTaGACCCCATCTAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: KMSPKWMRFLNSHVGSGREQEWG*TPSRSL
Trigger: CAGCGACCTAGATGGGGTCCACCCCCATTCCTGCTC...CCTACCACTTCCAACGTGGCTGTTCAAGAATCTCATCCATTTTGGGCTCATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGGGAGATGAGGGGCATTaGTACACCCAAGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GNTHSKYICTTKHSALQGGDEGH*YTQGGL
Trigger: CAGACCTCCTTGGGTGTACCAATGCCCCTCATCTCC...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCGGAGATGAGGGGCATTaGTACACCCAAGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGGDEGH*YTQGGL
Trigger: CAGACCTCCTTGGGTGTACCAATGCCCCTCATCTCC...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGGTTAGGTCAAGTGGATaGTTCTGTACCAAGGACACA +
Preference number: 4 (lower is better)
Translates to: ALPSNLAGGRQARLKKGEVRSSG*FCTKDT
Trigger: TGTGTCCTTGGTACAGAACCATCCACTTGACCTAAC...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCCGGACTAGCCGCAGTGATGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAACTTCGCGCCGCCAATaGCAAGTTGGAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: AGLAAVMPDSWKMSKSNQTSRRQ*QVGGRD
Trigger: ATCTCTCCCTCCAACTTGCCATTGGCGGCGCGAAGT...TTGATTACTTTTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCTAGTCCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335997.11
CDS-3UTR TCA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGCCGGATTCTCTTCTTTaGTTTCCCAGTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: DCKVTVVANTANSRKSTLPDSLL*FPSLLG
Trigger: GCCAAGAAGACTGGGAAATCAAAGAAGAGAATCCGG...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGATCCATCCCGTTGCTTaGGAACTCAAAGATCAGGTC +
Preference number: 4 (lower is better)
Translates to: DCKVTVVANTANSRKSTLIHPVA*ELKDQV
Trigger: GACCTGATCTTTGAGTTCGCAAGCAACGGGATGGAT...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGCGGTTGACATGGTGTaGGAGGTGGCCTCATTGTCA +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLAVDMV*EVASLS
Trigger: TGACAATGAGGCCACCTCGCACACCATGTCAACCGC...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCGAGGTACTGAAGATCTaGTTCTCATCCAGGATATCG +
Preference number: 4 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLEVLKI*FSSRIS
Trigger: CGATATCCTGGATGAGAAGCAGATCTTCAGTACCTC...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATATTCTCCTCCAGAGAATaGCCCTCCTGGTCACTAGTG +
Preference number: 4 (lower is better)
Translates to: GHSKGPQALIHITQSHQIFSSRE*PSWSLV
Trigger: CACTAGTGACCAGGAGGGGCATTCTCTGGAGGAGAA...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACGTGAGGTACTTCGGTTaGCCTTGGTCTTCCGGATTC +
Preference number: 4 (lower is better)
Translates to: YQGHSKGPQALIHITQSHVRYFG*PWSSGF
Trigger: GAATCCGGAAGACCAAGGGCAACCGAAGTACCTCAC...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGATGGTGCTGCCTTTaGCATCCTTTGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FPWLTFLSLALKLGRREARWCCL*HPLISS
Trigger: GGAAGAAATCAAAGGATGGCAAAGGCAGCACCATCT...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGAGATGGTGCTGCCTTTaGCATCCTTTGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKRWCCL*HPLISS
Trigger: GGAAGAAATCAAAGGATGGCAAAGGCAGCACCATCT...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TGGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAATCCTTCAGCAAACCACTTTGGCCAGTATaGCTCTTTGGTAGTAGTATC +
Preference number: 4 (lower is better)
Translates to: WLALRLEGTSSPSKSFSKPLWPV*LFGSSI
Trigger: GATACTACTACCAAAGAGGCATACTGGCCAAAGTGG...TTTGCTGAAGGATTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCCTTGACCCTAGGGGCTaGTGTAGTGCCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLLDPRG*CSARSP
Trigger: AGGACTTCTGGCACTACAGCAGCCCCTAGGGTCAAG...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCTTGAAGGCCATACAAGTCAGCCCGTTATaGTGCCAAAAGCATATGCCC +
Preference number: 4 (lower is better)
Translates to: SQPVMLPKAYALVLLKAIQVSPL*CQKHMP
Trigger: GGGCATATGCTTTTGGCAGCATAACGGGCTGACTTG...TATGGCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCCTCTTCTCACAAAGCTaGTGCACAAACCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGLFSQS*CTNPGH
Trigger: GTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAG...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACCCCCATCTAGGTCGCTaGCGGACTAGCCGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: TDSHYPKSPDNRVVSVADPHLGR*RTSRSD
Trigger: ATCACTGCGGCTAGTCCGGCAGCGACCTAGATGGGG...GTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGGCCTTCGAGGTGAGTTaGAGGCAGGCTGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVAFEVS*RQAEQQ
Trigger: CTGCTGCTCAGCCTGCCTGCAACTCACCTCGAAGGC...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGGGGTCTTCCAGCTGGTaGATATCATCATCCATCCCG +
Preference number: 4 (lower is better)
Translates to: GNTHSKYICTTKHSALQGGSSSW*ISSSIP
Trigger: CGGGATGGATGATGATATCCACCAGCTGGAAGACCC...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACTGCAGGGTCCGAGTCTaGAAGCATTTCGGAGGTACT +
Preference number: 4 (lower is better)
Translates to: YQGHSKGPQALIHITQSHCRVRV*KHFGGT
Trigger: AGTACCTCCGAAATGCTTCCAGACTCGGACCCTGCA...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACGGCATCTCCTTAAACTaGTACACCAGCCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: YQGHSKGPQALIHITQSHGISLN*YTSLCP
Trigger: AGGGCAGAGGCTGGTGTACCAGTTTAAGGAGATGCC...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACTGGCAGGAGGCCCATTaGTCAGCACCGTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: TDSHYPKSPDNRVVSVADWQEAH*SAPWSV
Trigger: CACTGACCACGGTGCTGACCAATGGGCCTCCTGCCA...GTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCGAAAGTAGAGGCCGCTaGAACACTCTGGAGAACGAG +
Preference number: 4 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGESRGR*NTLENE
Trigger: CTCGTTCTCCAGAGTGTTCCAGCGGCCTCTACTTTC...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCACCTGGGTTGGAAGTaGCTGAAGATGAGCCTGATC +
Preference number: 4 (lower is better)
Translates to: YQGHSKGPQALIHITQSHHLGWK*LKMSLI
Trigger: GATCAGGCTCATCTTCAGCCACTTCCAACCCAGGTG...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGCACCTGGGTTGGAAGTaGCTGAAGATGAGCCTGATC +
Preference number: 4 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLHLGWK*LKMSLI
Trigger: GATCAGGCTCATCTTCAGCCACTTCCAACCCAGGTG...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTGGGTCAGCCCAACAGTaGGGCGGCTGGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: IHITQSHQIIELFPWLTFGSAQQ*GGWEET
Trigger: TGTCTCCTCCCAGCCGCCCCACTGTTGGGCTGACCC...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGGGAAGTAGGGTTGAATaGGGAGAAAGGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKGSRVE*GERGWG
Trigger: ACCCCAGCCCCTTTCTCCCCATTCAACCCTACTTCC...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATACAGGGATGCTTAAGCTaGGCACTGTTTGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GHSKGPQALIHITQSHQIQGCLS*ALFGHS
Trigger: ACTGTGGCCAAACAGTGCCCAGCTTAAGCATCCCTG...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGAGGGAGCCCAGGATCGGGCCACAAACTTCTGCCTaGCTCAAGGCTTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: CLTAGKCQKVIKREPRIGPQTSA*LKAFSL
Trigger: GAGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGG...CCCGATCCTGGGCTCCCTCTTGATTACTTTTTGACATTTTCCAGCTGTCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACATCGGGGAAGTAGGCTaGGGTGTCAGCAAAGGCTAT +
Preference number: 4 (lower is better)
Translates to: YQGHSKGPQALIHITQSHIGEVG*GVSKGY
Trigger: ATAGCCTTTGCTGACACCCCAGCCTACTTCCCCGAT...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAAATAGAGTTGTTTCCGTaGCTGACATTTCTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: GRGEEIQAIGLGVGFEREIELFP*LTFLSL
Trigger: AAGGCTAAGAAATGTCAGCCACGGAAACAACTCTAT...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGGTTAGGTCAAGTGGATaGTTCTGTACCAAGGACACA +
Preference number: 4 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKVRSSG*FCTKDT
Trigger: TGTGTCCTTGGTACAGAACCATCCACTTGACCTAAC...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGGGGTCAGTGACAGGTaGGGTACTTCGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSGVSDR*GTSVAL
Trigger: AAGGGCAACCGAAGTACCTCACCTGTCACTGACCCC...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp ACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACGGATGCTGGGGTCAGTaGCAGGTGAGGTACTTCGGT +
Preference number: 4 (lower is better)
Translates to: TDSHYPKSPDNRVVSVADGCWGQ*QVRYFG
Trigger: ACCGAAGTACCTCACCTGTCACTGACCCCAGCATCC...GTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGGATGCTGGGGTCAGTaGCAGGTGAGGTACTTCGGT +
Preference number: 4 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSGCWGQ*QVRYFG
Trigger: ACCGAAGTACCTCACCTGTCACTGACCCCAGCATCC...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp AGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCTTGAAGGCCATATGGAGACCGACATGCTaGATTTTTGGCTTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SQPVMLPKAYALVLLKAIWRPTC*IFGFSQ
Trigger: TTGGGAGAAGCCAAAAATTCAGCATGTCGGTCTCCA...TATGGCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAGATGTTGCTGGGCACTaGAGATGCACTCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: GHSKGPQALIHITQSHQIDVAGH*RCTHSF
Trigger: AAAGCTGTGAGTGCATCTTCAGTGCCCAGCAACATC...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGTATTGACATCCCACTaGAATGCAGGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLVLTSH*NAGAGV
Trigger: CACACCTGCCCCTGCATTTCAGTGGGATGTCAATAC...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACCTTGGTCCAGCCAGTaGGGGCTGCTCCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKPWSSQ*GLLPEL
Trigger: CAGCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGG...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACAGTTGTTTCCGTGGCTaGCATTTCTTAGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: YQGHSKGPQALIHITQSHSCFRG*HFLALP
Trigger: GGGCAAGGCTAAGAAATGTCAGCCACGGAAACAACT...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCTCTGATCCTGCGTCATaGACAAGGTCCCGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGSDPAS*TRSRLL
Trigger: TAACAGACGGGACCTTGTGCATGACGCAGGATCAGA...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCCAGGTGTTTCTGTCTTaGAGAAGAGCCAGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGQVFLS*RRARRN
Trigger: GTTCCTCCTGGCTCTTCTGCAAGACAGAAACACCTG...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGCTCCTAGGTGGATGTTaGTGGGCACTGAAGATGCAC +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKLLGGC*WALKMH
Trigger: GTGCATCTTCAGTGCCCAGCAACATCCACCTAGGAG...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCAGGGGGAAAGAGGCCTaGAAAGTGAAGGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLRGKEA*KVKVSL
Trigger: CAAGGACACCTTCACTTTGCAGGCCTCTTTCCCCCT...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGAGGGGGAAAGAGGCCTaGAAAGTGAAGGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKRGKEA*KVKVSL
Trigger: CAAGGACACCTTCACTTTGCAGGCCTCTTTCCCCCT...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTAAAGCGTTCCTACTCTaGACTCGTTCCAGCTCTACA +
Preference number: 4 (lower is better)
Translates to: FPSITKSARYAAKSICPSKAFLL*TRSSST
Trigger: TGTAGAGCTGGAACGAGTGCAGAGTAGGAACGCTTT...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATACTTCCCCAATGTGCATaGGCATCAAAGCGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: GHSKGPQALIHITQSHQILPQCA*ASKRSY
Trigger: GTAGGAACGCTTTGATGCGCATGCACATTGGGGAAG...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAAGATTCCAGCCTGACTaGAAGGTGACTGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: GHSKGPQALIHITQSHQIRFQPD*KVTVVA
Trigger: AGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCT...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGGAGGGGTCTTCCAGCTaGTGGATATCATCATCCATC +
Preference number: 4 (lower is better)
Translates to: GNTHSKYICTTKHSALQGEGSSS*WISSSI
Trigger: GATGGATGATGATATCCACCAGCTGGAAGACCCCTC...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTTACTTCGGTTGCCCTTaGTCTTCCGGATTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FPSITKSARYAAKSICPSYFGCP*SSGFSS
Trigger: AGAAGAGAATCCGGAAGACCAAGGGCAACCGAAGTA...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp CCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGTACATACAGGGATAGAGCTGCCCTTGCCCTaGGGGGCAGATCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: PKETKIQTNKYTQVHTGIELPLP*GADLDE
Trigger: CTCATCCAGATCTGCCCCCCAGGGCAAGGGCAGCTC...TATCCCTGTATGTACTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp TGGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAATCCTTCAGCAAAGACATGCTGAATTTTTaGCTTCTCCCAAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: WLALRLEGTSSPSKSFSKDMLNF*LLPRRA
Trigger: AGCTCTTCTTGGGAGAAGCCAAAAATTCAGCATGTC...TTTGCTGAAGGATTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TTTCCGTGGCTGACATTTCTTAGCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAGACATGCTGAATTTTTaGCTTCTCCCAAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: FPWLTFLSLALKLGRREADMLNF*LLPRRA
Trigger: AGCTCTTCTTGGGAGAAGCCAAAAATTCAGCATGTC...TGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGCTAAGAAATGTCAGCCACGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACTTGGTGAGCTTGACCTaGCCCTCTGCTGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: TDSHYPKSPDNRVVSVADLVSLT*PSAGET
Trigger: CGTCTCTCCAGCAGAGGGCCAGGTCAAGCTCACCAA...GTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCCGGACTAGCCGCAGTGATGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAACTAGGTGGATGTTGCTaGGCACTGAAGATGCACTCA +
Preference number: 4 (lower is better)
Translates to: AGLAAVMPDSWKMSKSNQLGGCC*ALKMHS
Trigger: TGAGTGCATCTTCAGTGCCCAGCAACATCCACCTAG...TTGATTACTTTTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCTAGTCCGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGGATTGTGGGAACCCCTaGAAACCACCTGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKDCGNP*KPPGLE
Trigger: TTCCAACCCAGGTGGTTTCCAGGGGTTCCCACAATC...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGAGGGAGCCCAGGATCGGGAAATCCCTATCCCTGTaGCTGATCCACGGAGACATA +
Preference number: 4 (lower is better)
Translates to: CLTAGKCQKVIKREPRIGKSLSL*LIHGDI
Trigger: TATGTCTCCGTGGATCAGCCACAGGGATAGGGATTT...CCCGATCCTGGGCTCCCTCTTGATTACTTTTTGACATTTTCCAGCTGTCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCTTGAAGGCCATAAAATCCCTATCCCTGTaGCTGATCCACGGAGACATA +
Preference number: 4 (lower is better)
Translates to: SQPVMLPKAYALVLLKAIKSLSL*LIHGDI
Trigger: TATGTCTCCGTGGATCAGCCACAGGGATAGGGATTT...TATGGCCTTCAAGAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACTTCAGCAAAGCACTTTaGGGTGGCCCAAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: YQGHSKGPQALIHITQSHFSKAL*GGPRFQ
Trigger: CTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCATCGGGGAAGTAGGCTaGGGTGTCAGCAAAGGCTAT +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLIGEVG*GVSKGY
Trigger: ATAGCCTTTGCTGACACCCCAGCCTACTTCCCCGAT...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCTTGCCCTCAAACTTaGCAGGAGGGAGGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVPCPQT*QEGGKL
Trigger: GAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGG...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAATAGAGTTGTTTCCGTaGCTGACATTTCTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: TKKRRARARPGEVVRSSGIELFP*LTFLSL
Trigger: AAGGCTAAGAAATGTCAGCCACGGAAACAACTCTAT...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGATAGAGTTGTTTCCGTaGCTGACATTTCTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: ALPSNLAGGRQARLKKGEIELFP*LTFLSL
Trigger: AAGGCTAAGAAATGTCAGCCACGGAAACAACTCTAT...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CAA 72 bp CAGCTCTACAACATCTCCAGATTCGGAGGATCAAACTaGTACCCCATAGTCTCAGAGCAACTGAATCTCGGC +
Preference number: 4 (lower is better)
Translates to: QLYNISRFGGSN*YPIVSEQLNLG
Trigger: GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGAGATGTTGTAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACGTCTTTTCAGAGAGCTaGCAACGGGATTATCAGAGC +
Preference number: 4 (lower is better)
Translates to: YQGHSKGPQALIHITQSHVFSES*QRDYQS
Trigger: GCTCTGATAATCCCGTTGTCAGCTCTCTGAAAAGAC...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCTGGGAGACTCCATATTaGGTAAGACTTCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLWETPY*VRLPRL
Trigger: CAACCGCGGAAGTCTTACTCAATATGGAGTCTCCCA...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TTCCTACTCTGCACTCGTTCCAGCTCTACAACATCTCCAGATTCGGAGGATCAATGGAGACCGACATGCTaGATTTTTGGCTTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: FLLCTRSSSTTSPDSEDQWRPTC*IFGFSQ
Trigger: TTGGGAGAAGCCAAAAATTCAGCATGTCGGTCTCCA...TTGATCCTCCGAATCTGGAGATGTTGTAGAGCTGGAACGAGTGCAGAGTAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATATGGGGTCAAGTGTATTaGCATCCCACTGAAATGCAG +
Preference number: 4 (lower is better)
Translates to: GHSKGPQALIHITQSHQIWGQVY*HPTEMQ
Trigger: CTGCATTTCAGTGGGATGTCAATACACTTGACCCCA...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAGGGGCCCGAGAACTGTaGAGAAGACATTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: GHSKGPQALIHITQSHQIGAREL*RRHLIS
Trigger: TGAAATCAAATGTCTTCTTCACAGTTCTCGGGCCCC...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR TCA 90 bp TGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGAGGGAGCCCAGGATCGGGCTATCTTTAAGGAGCTaGCAAGCACCCACATGGAAA +
Preference number: 4 (lower is better)
Translates to: CLTAGKCQKVIKREPRIGLSLRS*QAPTWK
Trigger: TTTCCATGTGGGTGCTTGTCAGCTCCTTAAAGATAG...CCCGATCCTGGGCTCCCTCTTGATTACTTTTTGACATTTTCCAGCTGTCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR GCA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCATCCATCCCGTTGCTTaGGAACTCAAAGATCAGGTC +
Preference number: 4 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGIHPVA*ELKDQV
Trigger: GACCTGATCTTTGAGTTCGCAAGCAACGGGATGGAT...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGTGGTACACCAGCCTCTaGCCTTCCACTTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVWYTSL*PSTLAS
Trigger: ACTGGCCAAAGTGGAAGGGCAGAGGCTGGTGTACCA...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGGAGACAAAGTCTGGTTaGCCAGAAGGCTCGGATTGT +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKETKSG*PEGSDC
Trigger: ACAATCCGAGCCTTCTGGGCAACCAGACTTTGTCTC...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AATGTGAGCCAGGAGCTTAAGAGAAAGGTTGGGACTGGAGCTCTAGATTTAGGAGCATCTTCCCCAATGTaGATGCGCATCAAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: NVSQELKRKVGTGALDLGASSPM*MRIKAF
Trigger: GAACGCTTTGATGCGCATGCACATTGGGGAAGATGC...TCCTAAATCTAGAGCTCCAGTCCCAACCTTTCTCTTAAGCTCCTGGCTCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR GCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGGCATCTTCCCCAATGTaGATGCGCATCAAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKASSPM*MRIKAF
Trigger: GAACGCTTTGATGCGCATGCACATTGGGGAAGATGC...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGAGATTCCAGCCTGACTaGAAGGTGACTGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKRFQPD*KVTVVA
Trigger: AGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCT...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGAAATGTTCAGCAGATTaGTGGAAATGTGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: DCKVTVVANTANSRKSTLKCSAD*WKCEPG
Trigger: TCCTGGCTCACATTTCCAGCAATCTGCTGAACATTT...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCTCCACGATCACAGCTaGGAACACAGAGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVLHDHS*EHRGVF
Trigger: GAAGACCCCTCTGTGTTCCCAGCTGTGATCGTGGAG...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCTACTTCGGTTGCCCTTaGTCTTCCGGATTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGYFGCP*SSGFSS
Trigger: AGAAGAGAATCCGGAAGACCAAGGGCAACCGAAGTA...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAAGCTGGTTCGCCGGGTaGTACTGGCAGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKSWFAG*YWQRPQ
Trigger: CTGTGGCCTCTGCCAGTACCACCCGGCGAACCAGCT...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCCTAGGTGGATGTTGCTaGGCACTGAAGATGCACTCA +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLLGGCC*ALKMHS
Trigger: TGAGTGCATCTTCAGTGCCCAGCAACATCCACCTAG...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGGCTGTCTTGGAAACTaGCGTTCAGGGGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSGCLGN*RSGGKR
Trigger: CCTCTTTCCCCCTGAACGCCAGTTTCCAAGACAGCC...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAATCCTTCAGCAAATTTGCTTATATGTCATaGGGCTCCATCTTAATGAGG +
Preference number: 4 (lower is better)
Translates to: WLALRLEGTSSPSKSFSKFAYMS*GSILMR
Trigger: CCTCATTAAGATGGAGCCCCATGACATATAAGCAAA...TTTGCTGAAGGATTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGTTTGCTTATATGTCATaGGGCTCCATCTTAATGAGG +
Preference number: 4 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKFAYMS*GSILMR
Trigger: CCTCATTAAGATGGAGCCCCATGACATATAAGCAAA...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGACATACACACACCCTTaGAGACAAGACCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLTYTHP*RQDLTA
Trigger: AGCTGTGAGGTCTTGTCTCCAAGGGTGTGTGTATGT...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp CCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCGAGGGTGATAGTTGTTaGCTTAACAAAGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: PRFQPDCKVTVVANTANSEGDSC*LNKEEK
Trigger: CTTCTCTTCTTTGTTAAGCCAACAACTATCACCCTC...GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTGGATGCTGGGGTCAGTaGCAGGTGAGGTACTTCGGT +
Preference number: 4 (lower is better)
Translates to: IHITQSHQIIELFPWLTFGCWGQ*QVRYFG
Trigger: ACCGAAGTACCTCACCTGTCACTGACCCCAGCATCC...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCAAGGTCCTCAGGCACTaGTTCACATTACCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLKVLRH*FTLPKV
Trigger: GACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTT...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCATCATCCATCCCGTTaGTTGCGAACTCAAAGATCA +
Preference number: 4 (lower is better)
Translates to: YQGHSKGPQALIHITQSHHHPSR*LRTQRS
Trigger: TGATCTTTGAGTTCGCAAGCAACGGGATGGATGATG...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGGTACTGAAGATCTaGTTCTCATCCAGGATATCG +
Preference number: 4 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLEVLKI*FSSRIS
Trigger: CGATATCCTGGATGAGAAGCAGATCTTCAGTACCTC...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCTTCTCCTCCAGAGAATaGCCCTCCTGGTCACTAGTG +
Preference number: 4 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSFSSRE*PSWSLV
Trigger: CACTAGTGACCAGGAGGGGCATTCTCTGGAGGAGAA...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGAATGCTGCTCAATTTTaGCTGGTGGGTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKNAAQF*LVGHTC
Trigger: GCAAGTGTGACCCACCAGGCAAAATTGAGCAGCATT...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCTCTTCTCACAAAGCTaGTGCACAAACCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVLFSQS*CTNPGH
Trigger: GTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAG...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGAAACCATGTGGTAGGTaGCCATGCTTGAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKKPCGR*PCLSRN
Trigger: ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTT...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTAGAGAATGCCCCTCCTaGTCACTAGTGTCACCCGCC +
Preference number: 4 (lower is better)
Translates to: IHITQSHQIIELFPWLTFRECPS*SLVSPA
Trigger: GGCGGGTGACACTAGTGACCAGGAGGGGCATTCTCT...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCACCTGGGTTGGAAGTaGCTGAAGATGAGCCTGATC +
Preference number: 4 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVHLGWK*LKMSLI
Trigger: GATCAGGCTCATCTTCAGCCACTTCCAACCCAGGTG...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGGGAAACCACCTGGGTTaGAAGTGGCTGAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVGNHLG*KWLKMS
Trigger: GCTCATCTTCAGCCACTTCCAACCCAGGTGGTTTCC...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGAGGTACTGAAGATCTaGTTCTCATCCAGGATATCG +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLEVLKI*FSSRIS
Trigger: CGATATCCTGGATGAGAAGCAGATCTTCAGTACCTC...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCAGATGGTGCTGCCTTTaGCATCCTTTGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLRWCCL*HPLISS
Trigger: GGAAGAAATCAAAGGATGGCAAAGGCAGCACCATCT...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTTGGTACACCAGCCTCTaGCCTTCCACTTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: IHITQSHQIIELFPWLTFWYTSL*PSTLAS
Trigger: ACTGGCCAAAGTGGAAGGGCAGAGGCTGGTGTACCA...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCCTGCTGTGGCTTCGCTaGTCTCATCCTCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSLLWLR*SHPHLQ
Trigger: TTGAAGATGAGGATGAGAGCAGCGAAGCCACAGCAG...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCCTGGCCACAAACTTCTaGCTGGCTCAAGGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSLATNF*LAQGFF
Trigger: GAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAG...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACCCAAGGAGGTCTGCTaGAGTCATCACAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKPKEVC*SHHRGR
Trigger: CCTGCCTCTGTGATGACTGCAGCAGACCTCCTTGGG...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAATTGGTGAGCTTGACCTaGCCCTCTGCTGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKLVSLT*PSAGET
Trigger: CGTCTCTCCAGCAGAGGGCCAGGTCAAGCTCACCAA...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTGGAAGTAGGGTTGAATaGGGAGAAAGGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: IHITQSHQIIELFPWLTFGSRVE*GERGWG
Trigger: ACCCCAGCCCCTTTCTCCCCATTCAACCCTACTTCC...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGGTTATGATGCCATTGTaGACGTCGTCCAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVVMMPL*TSSNSS
Trigger: ACTGGAGTTGGACGACGTTCACAATGGCATCATAAC...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACTGCCTTCCAGGATCTaGTCCTGCGTCATGCACAAG +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKLPSRI*SCVMHK
Trigger: CTTGTGCATGACGCAGGATCAGATCCTGGAAGGCAG...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCATCCATCCCGTTGCTTaGGAACTCAAAGATCAGGTC +
Preference number: 4 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSIHPVA*ELKDQV
Trigger: GACCTGATCTTTGAGTTCGCAAGCAACGGGATGGAT...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp CCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGTACATACAGGGATAGTGAGGTACTTCGGTTaGCCTTGGTCTTCCGGATTC +
Preference number: 4 (lower is better)
Translates to: PKETKIQTNKYTQVHTGIVRYFG*PWSSGF
Trigger: GAATCCGGAAGACCAAGGGCAACCGAAGTACCTCAC...TATCCCTGTATGTACTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTGGCATCTCCTTAAACTaGTACACCAGCCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IHITQSHQIIELFPWLTFGISLN*YTSLCP
Trigger: AGGGCAGAGGCTGGTGTACCAGTTTAAGGAGATGCC...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp CCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGTACATACAGGGATAGATTGTGGGAACCCCTaGAAACCACCTGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: PKETKIQTNKYTQVHTGIDCGNP*KPPGLE
Trigger: TTCCAACCCAGGTGGTTTCCAGGGGTTCCCACAATC...TATCCCTGTATGTACTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAGGAGGAGACAAAGTCTaGTTGCCCAGAAGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKGGDKV*LPRRLG
Trigger: TCCGAGCCTTCTGGGCAACCAGACTTTGTCTCCTCC...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
3UTR CAA 72 bp CTGATTCACATTACCCAAAGTCACCAGATAATAGAGTaGTTTCCGTGGCTGACATTTCTTAGCCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LIHITQSHQIIE*FPWLTFLSLAL
Trigger: GAGGGCAAGGCTAAGAAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTTGGGAGACTCCATATTaGGTAAGACTTCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: IHITQSHQIIELFPWLTFWETPY*VRLPRL
Trigger: CAACCGCGGAAGTCTTACTCAATATGGAGTCTCCCA...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAGGGTCACACTTGCCCTaGCCCCTTTGCTTATATGTC +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKGSHLP*PLCLYV
Trigger: GACATATAAGCAAAGGGGTCAGGGCAAGTGTGACCC...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTTCTGATCCTGCGTCATaGACAAGGTCCCGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: IHITQSHQIIELFPWLTFSDPAS*TRSRLL
Trigger: TAACAGACGGGACCTTGTGCATGACGCAGGATCAGA...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTTCAGGCTTGTTTTTCTaGTTCCCCCACAGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: IHITQSHQIIELFPWLTFSGLFF*FPHSLD
Trigger: GTCCAAGCTGTGGGGGAAGCAGAAAAACAAGCCTGA...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAATCGGGGAAGTAGGCTaGGGTGTCAGCAAAGGCTAT +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKIGEVG*GVSKGY
Trigger: ATAGCCTTTGCTGACACCCCAGCCTACTTCCCCGAT...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp TCCAGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGAGGGTGATAGTTGTTaGCTTAACAAAGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SRFGGSNLYPIVSEQLNLEGDSC*LNKEEK
Trigger: CTTCTCTTCTTTGTTAAGCCAACAACTATCACCCTC...GAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp GCCGGACTAGCCGCAGTGATGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAAAAATGAGCCCAAAATaGATGAGATTCTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: AGLAAVMPDSWKMSKSNQKMSPK*MRFLNS
Trigger: GCTGTTCAAGAATCTCATCCATTTTGGGCTCATTTT...TTGATTACTTTTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCTAGTCCGGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR TCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAGATGTTGCTGGGCACTaGAGATGCACTCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKDVAGH*RCTHSF
Trigger: AAAGCTGTGAGTGCATCTTCAGTGCCCAGCAACATC...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp CCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGTACATACAGGGATAAAGGTCCTCAGGCACTaGTTCACATTACCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: PKETKIQTNKYTQVHTGIKVLRH*FTLPKV
Trigger: GACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTT...TATCCCTGTATGTACTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp CCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGTACATACAGGGATATACTTCGGTTGCCCTTaGTCTTCCGGATTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PKETKIQTNKYTQVHTGIYFGCP*SSGFSS
Trigger: AGAAGAGAATCCGGAAGACCAAGGGCAACCGAAGTA...TATCCCTGTATGTACTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACCGGATTCTCTTCTTTaGTTTCCCAGTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKPDSLL*FPSLLG
Trigger: GCCAAGAAGACTGGGAAATCAAAGAAGAGAATCCGG...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR TCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAATGACCTTCCAGCAATaGGTTTCCATGGAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKMTFQQ*VSMELE
Trigger: CTCCAACTCCATGGAAACTCATTGCTGGAAGGTCAT...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR GCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAAATGCTGCTCAATTTTaGCTGGTGGGTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKNAAQF*LVGHTC
Trigger: GCAAGTGTGACCCACCAGGCAAAATTGAGCAGCATT...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR GCA 90 bp ACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACGACCCTTTATCAAGATaGTTACTTTCAACCATCAGG +
Preference number: 4 (lower is better)
Translates to: TDSHYPKSPDNRVVSVADDPLSR*LLSTIR
Trigger: CCTGATGGTTGAAAGTAAGCATCTTGATAAAGGGTC...GTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CCA 90 bp ACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACTTTGCTTATATGTCATaGGGCTCCATCTTAATGAGG +
Preference number: 4 (lower is better)
Translates to: TDSHYPKSPDNRVVSVADFAYMS*GSILMR
Trigger: CCTCATTAAGATGGAGCCCCATGACATATAAGCAAA...GTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACGAGGGTGATAGTTGTTaGCTTAACAAAGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: TDSHYPKSPDNRVVSVADEGDSC*LNKEEK
Trigger: CTTCTCTTCTTTGTTAAGCCAACAACTATCACCCTC...GTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CCA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAGAGAAAGGTTGGGACTaGAGCTCTAGATTTAGGACC +
Preference number: 4 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKEKGWD*SSRFRT
Trigger: GGTCCTAAATCTAGAGCTCCAGTCCCAACCTTTCTC...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS CCA 90 bp AGCAGTAGTACTGGCAGGAGGCCCATTGGTCAGCACCGTGGTCAGTaGGATCGTCTGCAGGGTCAGGGCCGAGCCCGACCCACGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SSSTGRRPIGQHRGQ*DRLQGQGRARPTGA
Trigger: GGCCCCCGTGGGTCGGGCTCGGCCCTGACCCTGCAGACGATCCCACTGACCACGGTGCTGACCAATGGGCCTCCTGCCAGTACTACTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615377.4
CDS CCA 90 bp CTGCAGGGTCAGGGCCGAGCCCGACCCACGGGGGCCACTCCTAGGTaGATGTTGCTGGGCACTGAAGATGCACTCACAGCTTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LQGQGRARPTGATPR*MLLGTEDALTALVS
Trigger: GCTCACCAAAGCTGTGAGTGCATCTTCAGTGCCCAGCAACATCCACCTAGGAGTGGCCCCCGTGGGTCGGGCTCGGCCCTGACCCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615377.4
CDS GCA 90 bp GGGTCAGCCCAACAGTGGGGCGGCTGGGAGGAGACAAAGTCTGGTTaGCCAGAAGGCTCGGATTGTGGGAACCCCTGGAAACCACCTGGG +
Preference number: 5 (lower is better)
Translates to: GSAQQWGGWEETKSG*PEGSDCGNPWKPPG
Trigger: CCCAGGTGGTTTCCAGGGGTTCCCACAATCCGAGCCTTCTGGGCAACCAGACTTTGTCTCCTCCCAGCCGCCCCACTGTTGGGCTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 90 bp AGCCTGAGGAGAGCTCAAGTTCAGCCACTGGGGTCAGCCCAACAGTaGGGCGGCTGGGAGGAGACAAAGTCTGGTTGCCCAGAAGGCTCG +
Preference number: 5 (lower is better)
Translates to: SLRRAQVQPLGSAQQ*GGWEETKSGCPEGS
Trigger: CGAGCCTTCTGGGCAACCAGACTTTGTCTCCTCCCAGCCGCCCCACTGTTGGGCTGACCCCAGTGGCTGAACTTGAGCTCTCCTCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTTGCCACCTGGCTGTCTaGGAAACTGGCGTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: SHEEREVPRELLAADSRLCHLAV*ETGVQG
Trigger: CCCCTGAACGCCAGTTTCCAAGACAGCCAGGTGGCA...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TGGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAATCCTTCAGCAAAGTGGGTGGCGCCGGGTaGGTCGGACGGTTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: WLALRLEGTSSPSKSFSKVGGAG*VGRLAP
Trigger: TGGGGCCAACCGTCCGACCAACCCGGCGCCACCCAC...TTTGCTGAAGGATTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTGGGGTGGGGGATCTaGTCAGAAGGCTCCCAGATG +
Preference number: 5 (lower is better)
Translates to: SHEEREVPRELLAADSRLLGWGI*SEGSQM
Trigger: CATCTGGGAGCCTTCTGACAAGATCCCCCACCCCAG...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 90 bp GCACTTTCCTCTCTGGAGGCCTTCTCCTCCAGAGAATGCCCCTCCTaGTCACTAGTGTCACCCGCCCTGTTCAGGGCATCGGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: ALSSLEAFSSRECPS*SLVSPALFRASGSE
Trigger: CTCTGAGCCCGATGCCCTGAACAGGGCGGGTGACACTAGTGACCAGGAGGGGCATTCTCTGGAGGAGAAGGCCTCCAGAGAGGAAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 90 bp AGAGCTCAAGTTCAGCCACTGGGGTCAGCCCAACAGTGGGGCGGCTaGGAGGAGACAAAGTCTGGTTGCCCAGAAGGCTCGGATTGTGGG +
Preference number: 5 (lower is better)
Translates to: RAQVQPLGSAQQWGG*EETKSGCPEGSDCG
Trigger: CCCACAATCCGAGCCTTCTGGGCAACCAGACTTTGTCTCCTCCCAGCCGCCCCACTGTTGGGCTGACCCCAGTGGCTGAACTTGAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTATGACCACCAGGTCCTaGGGCATCTCCTTAAACTGG +
Preference number: 5 (lower is better)
Translates to: GSHEEREVPRELLAADSRMTTRS*GISLNW
Trigger: CCAGTTTAAGGAGATGCCCAAGGACCTGGTGGTCAT...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTCCAGGAAGAGTACCTaGGTCCAGCCAGTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGSRKST*VQPVRA
Trigger: AGCCCTCACTGGCTGGACCAAGGTACTCTTCCTGGA...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTGGTGAGGTACTTCGGTaGCCCTTGGTCTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: SHEEREVPRELLAADSRLGEVLR*PLVFRI
Trigger: AATCCGGAAGACCAAGGGCAACCGAAGTACCTCACC...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGGGGTTGGTCGGACGGTaGGCCCCAGCCAGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWGLVGR*APARSW
Trigger: CCAACTTCTGGCTGGGGCCAACCGTCCGACCAACCC...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS GCA 90 bp GTCTTCTTGGCACTTTCCTCTCTGGAGGCCTTCTCCTCCAGAGAATaGCCCTCCTGGTCACTAGTGTCACCCGCCCTGTTCAGGGCATCG +
Preference number: 5 (lower is better)
Translates to: VFLALSSLEAFSSRE*PSWSLVSPALFRAS
Trigger: CGATGCCCTGAACAGGGCGGGTGACACTAGTGACCAGGAGGGGCATTCTCTGGAGGAGAAGGCCTCCAGAGAGGAAAGTGCCAAGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 90 bp GCCCAGAAGGCTCGGATTGTGGGAACCCCTGGAAACCACCTGGGTTaGAAGTGGCTGAAGATGAGCCTGATCTCTCAGGAGCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: AQKARIVGTPGNHLG*KWLKMSLISQELPQ
Trigger: CTGAGGGAGCTCCTGAGAGATCAGGCTCATCTTCAGCCACTTCCAACCCAGGTGGTTTCCAGGGGTTCCCACAATCCGAGCCTTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ATCACAGAGGCAGGCTGGTCCGCCTTCGAGGTGAGTTGCAGGCAGGCTGAGCAGGTACTTCGGTTGCCCTaGGTCTTCCGGATTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ITEAGWSAFEVSCRQAEQVLRLP*VFRILF
Trigger: GAAGAGAATCCGGAAGACCAAGGGCAACCGAAGTAC...CTGCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCGTGGGTGGCGCCGGGTaGGTCGGACGGTTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGVGGAG*VGRLAP
Trigger: TGGGGCCAACCGTCCGACCAACCCGGCGCCACCCAC...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAGTGGCCCCTCCTaGACCCTAGGGGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWLSGPS*TLGAAV
Trigger: TACAGCAGCCCCTAGGGTCAAGGAGGGGCCACTGAG...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GGCAAACTCCAGGAAGAGTACCTTGGTCCAGCCAGTGAGGGCTGCTCCCAGAGCGGAGACAAAGTCTGGTaGCCCAGAAGGCTCGGATTG +
Preference number: 5 (lower is better)
Translates to: GKLQEEYLGPASEGCSQSGDKVW*PRRLGL
Trigger: CAATCCGAGCCTTCTGGGCAACCAGACTTTGTCTCC...GCTCTGGGAGCAGCCCTCACTGGCTGGACCAAGGTACTCTTCCTGGAGTTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCGGTAGGTGCCCATGCTaGAGCAGGAATGGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: KRRARARPGEVVRSSGWFGRCPC*SRNGGG
Trigger: TCCACCCCCATTCCTGCTCAAGCATGGGCACCTACC...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTGCCTTGCCCTCAAACTaGGCAGGAGGGAGGCAAGCT +
Preference number: 5 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCALPSN*AGGRQA
Trigger: AGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS TCA 90 bp GTGTCCTTGAAAGTAGAGGCCGCTGGAACACTCTGGAGAACGAGCTaGGTGGGAGCAGTAGTACTGGCAGGAGGCCCATTGGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: VSLKVEAAGTLWRTS*VGAVVLAGGPLVST
Trigger: GGTGCTGACCAATGGGCCTCCTGCCAGTACTACTGCTCCCACTCAGCTCGTTCTCCAGAGTGTTCCAGCGGCCTCTACTTTCAAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS GCA 90 bp AACATAGGAGGAGGACCTCAGTGGCCCCTCCTTGACCCTAGGGGCTaGTGTAGTGCCAGAAGTCCTGATGAAGGCAGCAATGACAGTCCC +
Preference number: 5 (lower is better)
Translates to: NIGGGPQWPLLDPRG*CSARSPDEGSNDSP
Trigger: GGGACTGTCATTGCTGCCTTCATCAGGACTTCTGGCACTACAGCAGCCCCTAGGGTCAAGGAGGGGCCACTGAGGTCCTCCTCCTATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 90 bp TTGCTGGGCACTGAAGATGCACTCACAGCTTTGGTGAGCTTGACCTaGCCCTCTGCTGGAGAGACGAGCATGGTGGAGGTAGTGGGGATC +
Preference number: 5 (lower is better)
Translates to: LLGTEDALTALVSLT*PSAGETSMVEVVGI
Trigger: GATCCCCACTACCTCCACCATGCTCGTCTCTCCAGCAGAGGGCCAGGTCAAGCTCACCAAAGCTGTGAGTGCATCTTCAGTGCCCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 90 bp AAGGCTCGGATTGTGGGAACCCCTGGAAACCACCTGGGTTGGAAGTaGCTGAAGATGAGCCTGATCTCTCAGGAGCTCCCTCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: KARIVGTPGNHLGWK*LKMSLISQELPQGL
Trigger: GAGACCCTGAGGGAGCTCCTGAGAGATCAGGCTCATCTTCAGCCACTTCCAACCCAGGTGGTTTCCAGGGGTTCCCACAATCCGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGCTGGGAGACTCCATATaGAGTAAGACTTCCGCGGTT +
Preference number: 5 (lower is better)
Translates to: CHGNSWLPTPVFLVKESGLGDSI*SKTSAV
Trigger: AACCGCGGAAGTCTTACTCAATATGGAGTCTCCCAG...CCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTACAGGTGTTTCTGTCTaGCAGAAGAGCCAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SHEEREVPRELLAADSRLTGVSV*QKSQEE
Trigger: TTCCTCCTGGCTCTTCTGCAAGACAGAAACACCTGT...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTCTTAAAGTGAAGGTGTCCTaGAAAGTAGAGGCCGCTGGA +
Preference number: 5 (lower is better)
Translates to: SHEEREVPRELLAADSRLKVKVS*KVEAAG
Trigger: TCCAGCGGCCTCTACTTTCAAGGACACCTTCACTTT...AAGACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATTGCCACCTGGCTGTCTaGGAAACTGGCGTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNCHLAV*ETGVQG
Trigger: CCCCTGAACGCCAGTTTCCAAGACAGCCAGGTGGCA...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGGGGTTGGTCGGACGGTaGGCCCCAGCCAGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: DCKVTVVANTANSRKSTLGLVGR*APARSW
Trigger: CCAACTTCTGGCTGGGGCCAACCGTCCGACCAACCC...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTCTCAGTGGCCCCTCCTaGACCCTAGGGGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTLSGPS*TLGAAV
Trigger: TACAGCAGCCCCTAGGGTCAAGGAGGGGCCACTGAG...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTGGGGTGGGGGATCTaGTCAGAAGGCTCCCAGATG +
Preference number: 5 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWLGWGI*SEGSQM
Trigger: CATCTGGGAGCCTTCTGACAAGATCCCCCACCCCAG...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGGGTAGGTGCCCATGCTaGAGCAGGAATGGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWGRCPC*SRNGGG
Trigger: TCCACCCCCATTCCTGCTCAAGCATGGGCACCTACC...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS GCA 90 bp GCCACCTGGCTGTCTTGGAAACTGGCGTTCAGGGGGAAAGAGGCCTaGAAAGTGAAGGTGTCCTTGAAAGTAGAGGCCGCTGGAACACTC +
Preference number: 5 (lower is better)
Translates to: ATWLSWKLAFRGKEA*KVKVSLKVEAAGTL
Trigger: GAGTGTTCCAGCGGCCTCTACTTTCAAGGACACCTTCACTTTGCAGGCCTCTTTCCCCCTGAACGCCAGTTTCCAAGACAGCCAGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AAAGAAGGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGGTAAGACTTCCGCGGTaGACATGGTGTGCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: KEGRGEEIQAIGLGVGFEVRLPR*TWCARW
Trigger: CCACCTCGCACACCATGTCAACCGCGGAAGTCTTAC...CTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCCTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGGTAAGACTTCCGCGGTaGACATGGTGTGCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: ALPSNLAGGRQARLKKGEVRLPR*TWCARW
Trigger: CCACCTCGCACACCATGTCAACCGCGGAAGTCTTAC...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAACTCTGCCCTTCCACTTaGGCCAGTATGCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: GRGEEIQAIGLGVGFERELCPST*ASMPLW
Trigger: CCAAAGAGGCATACTGGCCAAAGTGGAAGGGCAGAG...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACACAGCTTTGGTGAGCTaGACCTGGCCCTCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHTALVS*TWPSAG
Trigger: TCCAGCAGAGGGCCAGGTCAAGCTCACCAAAGCTGT...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGACAGCTTTGGTGAGCTaGACCTGGCCCTCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWTALVS*TWPSAG
Trigger: TCCAGCAGAGGGCCAGGTCAAGCTCACCAAAGCTGT...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTGATGCACTCACAGCTTaGGTGAGCTTGACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPDALTA*VSLTWP
Trigger: GGGCCAGGTCAAGCTCACCAAAGCTGTGAGTGCATC...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GTCCCTGAGGAGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTGATGCACTCACAGCTTaGGTGAGCTTGACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: VPEERIFPNVHAHQSVPTDALTA*VSLTWP
Trigger: GGGCCAGGTCAAGCTCACCAAAGCTGTGAGTGCATC...AGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGCCCAGAAGGCTCGGATaGTGGGAACCCCTGGAAACC +
Preference number: 5 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKPRRLG*WEPLET
Trigger: GGTTTCCAGGGGTTCCCACAATCCGAGCCTTCTGGG...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCGCAGGGCCGGGGGACTaGGGGTCAAGTGTATTGACA +
Preference number: 5 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLAGPGD*GSSVLT
Trigger: TGTCAATACACTTGACCCCAAGTCCCCCGGCCCTGC...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGTCCAGGAAGAGTACCTaGGTCCAGCCAGTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: ALPSNLAGGRQARLKKGESRKST*VQPVRA
Trigger: AGCCCTCACTGGCTGGACCAAGGTACTCTTCCTGGA...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TGCAGGAGAGCCCAGCTAGTGTGGGCTCACGGGGGCCCGAGAACTGTGAAGAAGTTGAGAGAGAATAGGTaGACCCTTCCTCGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: CRRAQLVWAHGGPRTVKKLRENR*TLPRKE
Trigger: CTCTTTCCGAGGAAGGGTCAACCTATTCTCTCTCAA...CTTCTTCACAGTTCTCGGGCCCCCGTGAGCCCACACTAGCTGGGCTCTCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CAA 90 bp ATCACAGAGGCAGGCTGGTCCGCCTTCGAGGTGAGTTGCAGGCAGGCTGAGCAGTTGAGAGAGAATAGGTaGACCCTTCCTCGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: ITEAGWSAFEVSCRQAEQLRENR*TLPRKE
Trigger: CTCTTTCCGAGGAAGGGTCAACCTATTCTCTCTCAA...CTGCTCAGCCTGCCTGCAACTCACCTCGAAGGCGGACCAGCCTGCCTCTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GAACTCCTGGCTGCCGACTCCCGTCTTCTTGGTGAAGGAGTCAGGGTTAGGTGTATGTGCCATGGTGGTTaGCTGCACCCATCAACCCGT +
Preference number: 5 (lower is better)
Translates to: ELLAADSRLLGEGVRVRCMCHGG*LHPSTR
Trigger: ACGGGTTGATGGGTGCAGCAAACCACCATGGCACAT...ACACCTAACCCTGACTCCTTCACCAAGAAGACGGGAGTCGGCAGCCAGGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CAA 90 bp GGGAGCCACGAAGAGAGAGAGGTGCCACGGGAACTCCTGGCTGCCGACTCCCGTGCAGAACGTGCAGGTTaGTTACATAGGTATACATGT +
Preference number: 5 (lower is better)
Translates to: GSHEEREVPRELLAADSRAERAG*LHRYTC
Trigger: ACATGTATACCTATGTAACAAACCTGCACGTTCTGC...ACGGGAGTCGGCAGCCAGGAGTTCCCGTGGCACCTCTCTCTCTTCGTGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS GCA 90 bp ACACAGAGGGGTCTTCCAGCTGGTGGATATCATCATCCATCCCGTTaGTTGCGAACTCAAAGATCAGGTCACTGGGCCCCTGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TQRGLPAGGYHHPSR*LRTQRSGHWAPELQ
Trigger: CTGCAGCTCAGGGGCCCAGTGACCTGATCTTTGAGTTCGCAAGCAACGGGATGGATGATGATATCCACCAGCTGGAAGACCCCTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434609.1
CDS CCA 90 bp GAGACAAAGTCTGGTTGCCCAGAAGGCTCGGATTGTGGGAACCCCTaGAAACCACCTGGGTTGGAAGTGGCTGAAGATGAGCCTGATCTC +
Preference number: 5 (lower is better)
Translates to: ETKSGCPEGSDCGNP*KPPGLEVAEDEPDL
Trigger: GAGATCAGGCTCATCTTCAGCCACTTCCAACCCAGGTGGTTTCCAGGGGTTCCCACAATCCGAGCCTTCTGGGCAACCAGACTTTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTCAATACCCAGGTACTTaGGAGCCTAGAGCCTACCCC +
Preference number: 5 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPQYPGT*EPRAYP
Trigger: GGGGTAGGCTCTAGGCTCCAAAGTACCTGGGTATTG...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS CCA 90 bp GAAAGAGGCCTGCAAAGTGAAGGTGTCCTTGAAAGTAGAGGCCGCTaGAACACTCTGGAGAACGAGCTGAGTGGGAGCAGTAGTACTGGC +
Preference number: 5 (lower is better)
Translates to: ERGLQSEGVLESRGR*NTLENELSGSSSTG
Trigger: GCCAGTACTACTGCTCCCACTCAGCTCGTTCTCCAGAGTGTTCCAGCGGCCTCTACTTTCAAGGACACCTTCACTTTGCAGGCCTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGCAATACCCAGGTACTTaGGAGCCTAGAGCCTACCCC +
Preference number: 5 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKQYPGT*EPRAYP
Trigger: GGGGTAGGCTCTAGGCTCCAAAGTACCTGGGTATTG...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS-3UTR CAA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCAGCTGTGGGGCTTTCTaGATGAAGGGACAATACCCA +
Preference number: 5 (lower is better)
Translates to: KRRARARPGEVVRSSGWFSCGAF*MKGQYP
Trigger: TGGGTATTGTCCCTTCATCAAGAAAGCCCCACAGCT...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAAAGCTTGGACACAGCTTaGGAGTCCACCAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: GRGEEIQAIGLGVGFERESLDTA*ESTSLK
Trigger: CTTCAAACTGGTGGACTCCAAAGCTGTGTCCAAGCT...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGGCAGGCTGAGCAGCAGAAACCATGTGGTAGGTGCCCATGCTTGAGCAGGAATATGACCACCAGGTCCTaGGGCATCTCCTTAAACTGG +
Preference number: 5 (lower is better)
Translates to: RQAEQQKPCGRCPCLSRNMTTRS*GISLNW
Trigger: CCAGTTTAAGGAGATGCCCAAGGACCTGGTGGTCAT...ATTCCTGCTCAAGCATGGGCACCTACCACATGGTTTCTGCTGCTCAGCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AATGTGAGCCAGGAGCTTAAGAGAAAGGTTGGGACTGGAGCTCTAGATTTAGGAGGGTTGGTCGGACGGTaGGCCCCAGCCAGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: NVSQELKRKVGTGALDLGGLVGR*APARSW
Trigger: CCAACTTCTGGCTGGGGCCAACCGTCCGACCAACCC...TCCTAAATCTAGAGCTCCAGTCCCAACCTTTCTCTTAAGCTCCTGGCTCACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CAA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGCTCAGTGGCCCCTCCTaGACCCTAGGGGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLLSGPS*TLGAAV
Trigger: TACAGCAGCCCCTAGGGTCAAGGAGGGGCCACTGAG...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GCCTTGCCCTCAAACTTGGCAGGAGGGAGGCAAGCTCGTTTAAAGAAGGGAGAGTGGAAACCACCTGGGTaGGAAGTGGCTGAAGATGAG +
Preference number: 5 (lower is better)
Translates to: ALPSNLAGGRQARLKKGEWKPPG*EVAEDE
Trigger: CTCATCTTCAGCCACTTCCAACCCAGGTGGTTTCCA...CTCTCCCTTCTTTAAACGAGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACTGGAAACCACCTGGGTaGGAAGTGGCTGAAGATGAG +
Preference number: 5 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHWKPPG*EVAEDE
Trigger: CTCATCTTCAGCCACTTCCAACCCAGGTGGTTTCCA...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTCCCAGAAGGCTCGGATaGTGGGAACCCCTGGAAACC +
Preference number: 5 (lower is better)
Translates to: FPSITKSARYAAKSICPSPRRLG*WEPLET
Trigger: GGTTTCCAGGGGTTCCCACAATCCGAGCCTTCTGGG...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACCTTGCCCTGACCCCTTaGCTTATATGTCATGGGGCT +
Preference number: 5 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHLALTP*LICHGA
Trigger: AGCCCCATGACATATAAGCAAAGGGGTCAGGGCAAG...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACGACATACACACACCCTaGGAGACAAGACCTCACAGC +
Preference number: 5 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHDIHTP*ETRPHS
Trigger: GCTGTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTC...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGACTTCAGCAAAGCACTTaGGGGTGGCCCAAGATTCCA +
Preference number: 5 (lower is better)
Translates to: TKKRRARARPGEVVRSSGLQQST*GWPKIP
Trigger: TGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAAG...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ACAAAGAAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGAGCCGCCAATGGCAAGTaGGAGGGAGAGATGCAAATA +
Preference number: 5 (lower is better)
Translates to: TKKRRARARPGEVVRSSGAANGK*EGEMQI
Trigger: TATTTGCATCTCTCCCTCCAACTTGCCATTGGCGGC...TCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTTCTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335997.11
CDS GCA 90 bp AGAGGGGTCTTCCAGCTGGTGGATATCATCATCCATCCCGTTGCTTaGGAACTCAAAGATCAGGTCACTGGGCCCCTGAGCTGCAGTAAA +
Preference number: 5 (lower is better)
Translates to: RGVFQLVDIIIHPVA*ELKDQVTGPLSCSK
Trigger: TTTACTGCAGCTCAGGGGCCCAGTGACCTGATCTTTGAGTTCGCAAGCAACGGGATGGATGATGATATCCACCAGCTGGAAGACCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434609.1
CDS-3UTR CAA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACAGCTGTGGGGCTTTCTaGATGAAGGGACAATACCCA +
Preference number: 5 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHSCGAF*MKGQYP
Trigger: TGGGTATTGTCCCTTCATCAAGAAAGCCCCACAGCT...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTCATCCATCCCGTTGCTaGCGAACTCAAAGATCAGGT +
Preference number: 5 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPHPSRC*RTQRSG
Trigger: ACCTGATCTTTGAGTTCGCAAGCAACGGGATGGATG...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTGGGAGACTCCATATaGAGTAAGACTTCCGCGGTT +
Preference number: 5 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWLGDSI*SKTSAV
Trigger: AACCGCGGAAGTCTTACTCAATATGGAGTCTCCCAG...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GTCCCTGAGGAGCGCATCTTCCCCAATGTGCATGCGCATCAAAGCGTTCCTACTACAGGTGTTTCTGTCTaGCAGAAGAGCCAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: VPEERIFPNVHAHQSVPTTGVSV*QKSQEE
Trigger: TTCCTCCTGGCTCTTCTGCAAGACAGAAACACCTGT...AGTAGGAACGCTTTGATGCGCATGCACATTGGGGAAGATGCGCTCCTCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAAGTCCACTTGATGTACTaGGGACAGGTGTTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: GRGEEIQAIGLGVGFEREVHLMY*GQVFLS
Trigger: AGACAGAAACACCTGTCCCAAGTACATCAAGTGGAC...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GGGAGAGGGGAGGAGATCCAGGCAATTGGCCTAGGGGTTGGCTTTGAGAGAGAACGACATGCTGAATTTTaGGCTTCTCCCAAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GRGEEIQAIGLGVGFERERHAEF*ASPKKS
Trigger: GCTCTTCTTGGGAGAAGCCAAAAATTCAGCATGTCG...TTCTCTCTCAAAGCCAACCCCTAGGCCAATTGCCTGGATCTCCTCCCCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACTGCCACCTGGCTGTCTaGGAAACTGGCGTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: YQGHSKGPQALIHITQSHCHLAV*ETGVQG
Trigger: CCCCTGAACGCCAGTTTCCAAGACAGCCAGGTGGCA...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGCAGGGCCGGGGGACTaGGGGTCAAGTGTATTGACA +
Preference number: 5 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLAGPGD*GSSVLT
Trigger: TGTCAATACACTTGACCCCAAGTCCCCCGGCCCTGC...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGGCAGGGCCGGGGGACTaGGGGTCAAGTGTATTGACA +
Preference number: 5 (lower is better)
Translates to: GNTHSKYICTTKHSALQGAGPGD*GSSVLT
Trigger: TGTCAATACACTTGACCCCAAGTCCCCCGGCCCTGC...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCGACATACACACACCCTaGGAGACAAGACCTCACAGC +
Preference number: 5 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLDIHTP*ETRPHS
Trigger: GCTGTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTC...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAGGTAGGTGCCCATGCTaGAGCAGGAATGGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: GHSKGPQALIHITQSHQIGRCPC*SRNGGG
Trigger: TCCACCCCCATTCCTGCTCAAGCATGGGCACCTACC...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGCCTTGCCCTCAAACTaGGCAGGAGGGAGGCAAGCT +
Preference number: 5 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLALPSN*AGGRQA
Trigger: AGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS TCA 90 bp CTTCCAGGATCTGATCCTGCGTCATGCACAAGGTCCCGTCTGTTATaGTGCCATTGTGAACGTCGTCCAACTCCAGTCCCGAGTACAGAT +
Preference number: 5 (lower is better)
Translates to: LPGSDPASCTRSRLL*CHCERRPTPVPSTD
Trigger: ATCTGTACTCGGGACTGGAGTTGGACGACGTTCACAATGGCATCATAACAGACGGGACCTTGTGCATGACGCAGGATCAGATCCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000434609.1
ENST00000615377.4
CDS CCA 90 bp AAACAGGTAGTTGGGCAGAGTGACAGCTGGTGCAGGGTCCGAGTCTaGAAGCATTTCGGAGGTACTGAAGATCTGCTTCTCATCCAGGAT +
Preference number: 5 (lower is better)
Translates to: KQVVGQSDSWCRVRV*KHFGGTEDLLLIQD
Trigger: ATCCTGGATGAGAAGCAGATCTTCAGTACCTCCGAAATGCTTCCAGACTCGGACCCTGCACCAGCTGTCACTCTGCCCAACTACCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TGGCTAGCTCTGAGGCTGGAGGGCACTTCATCCCCGTCTAAATCCTTCAGCAAACATCCATCCCGTTGCTaGCGAACTCAAAGATCAGGT +
Preference number: 5 (lower is better)
Translates to: WLALRLEGTSSPSKSFSKHPSRC*RTQRSG
Trigger: ACCTGATCTTTGAGTTCGCAAGCAACGGGATGGATG...TTTGCTGAAGGATTTAGACGGGGATGAAGTGCCCTCCAGCCTCAGAGCTAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCCATCCATCCCGTTGCTaGCGAACTCAAAGATCAGGT +
Preference number: 5 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLHPSRC*RTQRSG
Trigger: ACCTGATCTTTGAGTTCGCAAGCAACGGGATGGATG...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGACCTCACTCATCATCCATCCCGTaGCTTGCGAACTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: SLWLIHGDIHTPLETRPHSSSIP*LANSKI
Trigger: GATCTTTGAGTTCGCAAGCAACGGGATGGATGATGA...GTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACGTAAGACTTCCGCGGTaGACATGGTGTGCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: YQGHSKGPQALIHITQSHVRLPR*TWCARW
Trigger: CCACCTCGCACACCATGTCAACCGCGGAAGTCTTAC...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTAGCTTGGACACAGCTTaGGAGTCCACCAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTSLDTA*ESTSLK
Trigger: CTTCAAACTGGTGGACTCCAAAGCTGTGTCCAAGCT...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTCTCTGCCCTTCCACTTaGGCCAGTATGCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: FPSITKSARYAAKSICPSLCPST*ASMPLW
Trigger: CCAAAGAGGCATACTGGCCAAAGTGGAAGGGCAGAG...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TTCCTACTCTGCACTCGTTCCAGCTCTACAACATCTCCAGATTCGGAGGATCAAACAGCTTTGGTGAGCTaGACCTGGCCCTCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: FLLCTRSSSTTSPDSEDQTALVS*TWPSAG
Trigger: TCCAGCAGAGGGCCAGGTCAAGCTCACCAAAGCTGT...TTGATCCTCCGAATCTGGAGATGTTGTAGAGCTGGAACGAGTGCAGAGTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGACTCCTAGGTGGATGTaGCTGGGCACTGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: DCKVTVVANTANSRKSTLTPRWM*LGTEDA
Trigger: TGCATCTTCAGTGCCCAGCAACATCCACCTAGGAGT...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TTCAGCAAAGCACTTTGGGGTGGCCCAAGATTCCAGCCTGACTGCAAGGTGACTAAAGTGAAGGTGTCCTaGAAAGTAGAGGCCGCTGGA +
Preference number: 5 (lower is better)
Translates to: FSKALWGGPRFQPDCKVTKVKVS*KVEAAG
Trigger: TCCAGCGGCCTCTACTTTCAAGGACACCTTCACTTT...AGTCACCTTGCAGTCAGGCTGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGTGGAAACCACCTGGGTaGGAAGTGGCTGAAGATGAG +
Preference number: 5 (lower is better)
Translates to: DCKVTVVANTANSRKSTLWKPPG*EVAEDE
Trigger: CTCATCTTCAGCCACTTCCAACCCAGGTGGTTTCCA...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAGAGGGAGCCCAGGATCGGGGGAGACAAAGTCTGGTaGCCCAGAAGGCTCGGATTG +
Preference number: 5 (lower is better)
Translates to: CLTAGKCQKVIKREPRIGGDKVW*PRRLGL
Trigger: CAATCCGAGCCTTCTGGGCAACCAGACTTTGTCTCC...CCCGATCCTGGGCTCCCTCTTGATTACTTTTTGACATTTTCCAGCTGTCAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGGACATACACACACCCTaGGAGACAAGACCTCACAGC +
Preference number: 5 (lower is better)
Translates to: DCKVTVVANTANSRKSTLDIHTP*ETRPHS
Trigger: GCTGTGAGGTCTTGTCTCCAAGGGTGTGTGTATGTC...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGGGCTCTTCTCACAAAGCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGTTGAGAGAGAATAGGTaGACCCTTCCTCGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: RALLTKLLHKPWPQTSAWLRENR*TLPRKE
Trigger: CTCTTTCCGAGGAAGGGTCAACCTATTCTCTCTCAA...CCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGCTTTGTGAGAAGAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 90 bp TGCCTGGTGGGTCACACTTGCCCTGACCCCTTTGCTTATATGTCATaGGGCTCCATCTTAATGAGGGAAGTAGGGTTGAATGGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: CLVGHTCPDPFAYMS*GSILMREVGLNGEK
Trigger: TTTCTCCCCATTCAACCCTACTTCCCTCATTAAGATGGAGCCCCATGACATATAAGCAAAGGGGTCAGGGCAAGTGTGACCCACCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCTCATCATCCATCCCGTaGCTTGCGAACTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLSSSIP*LANSKI
Trigger: GATCTTTGAGTTCGCAAGCAACGGGATGGATGATGA...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GCTGCTGCACAAACCCTGGCCACAAACTTCTGCCTGGCTCAAGGCTTTTTCCCTTCCGGATTCTCTTCTTaGATTTCCCAGTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: AAAQTLATNFCLAQGFFPSGFSS*ISQSSW
Trigger: CCAAGAAGACTGGGAAATCAAAGAAGAGAATCCGGA...AGGGAAAAAGCCTTGAGCCAGGCAGAAGTTTGTGGCCAGGGTTTGTGCAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGGTGAGGTACTTCGGTaGCCCTTGGTCTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLGEVLR*PLVFRI
Trigger: AATCCGGAAGACCAAGGGCAACCGAAGTACCTCACC...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCGGTGAGGTACTTCGGTaGCCCTTGGTCTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGGEVLR*PLVFRI
Trigger: AATCCGGAAGACCAAGGGCAACCGAAGTACCTCACC...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAGGAAGAGTACCTTGACAGGTGTTTCTGTCTaGCAGAAGAGCCAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: DCKVTVVANTANSRKSTLTGVSV*QKSQEE
Trigger: TTCCTCCTGGCTCTTCTGCAAGACAGAAACACCTGT...CAAGGTACTCTTCCTGGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATACTCTGCCCTTCCACTTaGGCCAGTATGCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: GHSKGPQALIHITQSHQILCPST*ASMPLW
Trigger: CCAAAGAGGCATACTGGCCAAAGTGGAAGGGCAGAG...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGAGACAAGCGACATGCTGAATTTTaGGCTTCTCCCAAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: IPIPVADPRRHTHTLGDKRHAEF*ASPKKS
Trigger: GCTCTTCTTGGGAGAAGCCAAAAATTCAGCATGTCG...CTTGTCTCCAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AATGTGAGCCAGGAGCTTAAGAGAAAGGTTGGGACTGGAGCTCTAGATTTAGGAGATGCACTCACAGCTTaGGTGAGCTTGACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: NVSQELKRKVGTGALDLGDALTA*VSLTWP
Trigger: GGGCCAGGTCAAGCTCACCAAAGCTGTGAGTGCATC...TCCTAAATCTAGAGCTCCAGTCCCAACCTTTCTCTTAAGCTCCTGGCTCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CAA 90 bp CCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCAAATGCTGCTCAATTTaGCCTGGTGGGTCACACTTG +
Preference number: 5 (lower is better)
Translates to: PRFQPDCKVTVVANTANSKCCSI*PGGSHL
Trigger: CAAGTGTGACCCACCAGGCAAAATTGAGCAGCATTT...GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTCTTCAGCAAAGCACTTaGGGGTGGCCCAAGATTCCA +
Preference number: 5 (lower is better)
Translates to: FPSITKSARYAAKSICPSLQQST*GWPKIP
Trigger: TGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAAG...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AAGAGAAGAGCGAGAGCGCGGCCAGGGGAGGTAGTTAGGTCAAGTGGATGGTTCAAATGGATGAGATTCTaGAACAGCCACGTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: KRRARARPGEVVRSSGWFKWMRF*NSHVGS
Trigger: ACTTCCAACGTGGCTGTTCAAGAATCTCATCCATTT...GAACCATCCACTTGACCTAACTACCTCCCCTGGCCGCGCTCTCGCTCTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CAA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAACTCCTAGGTGGATGTaGCTGGGCACTGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: GHSKGPQALIHITQSHQITPRWM*LGTEDA
Trigger: TGCATCTTCAGTGCCCAGCAACATCCACCTAGGAGT...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTAAAGTGAAGGTGTCCTaGAAAGTAGAGGCCGCTGGA +
Preference number: 5 (lower is better)
Translates to: FPSITKSARYAAKSICPSKVKVS*KVEAAG
Trigger: TCCAGCGGCCTCTACTTTCAAGGACACCTTCACTTT...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACCCCAGAAGGCTCGGATaGTGGGAACCCCTGGAAACC +
Preference number: 5 (lower is better)
Translates to: TDSHYPKSPDNRVVSVADPRRLG*WEPLET
Trigger: GGTTTCCAGGGGTTCCCACAATCCGAGCCTTCTGGG...GTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCCTGGGGTGGGGGATCTaGTCAGAAGGCTCCCAGATG +
Preference number: 5 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSLGWGI*SEGSQM
Trigger: CATCTGGGAGCCTTCTGACAAGATCCCCCACCCCAG...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCCTTGCCCTGACCCCTTaGCTTATATGTCATGGGGCT +
Preference number: 5 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGLALTP*LICHGA
Trigger: AGCCCCATGACATATAAGCAAAGGGGTCAGGGCAAG...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCCTTCAGCAAAGCACTTaGGGGTGGCCCAAGATTCCA +
Preference number: 5 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGLQQST*GWPKIP
Trigger: TGGAATCTTGGGCCACCCCAAAGTGCTTTGCTGAAG...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GCCGGACTAGCCGCAGTGATGCCTGACAGCTGGAAAATGTCAAAAAGTAATCAAAGCTGTGGGGCTTTCTaGATGAAGGGACAATACCCA +
Preference number: 5 (lower is better)
Translates to: AGLAAVMPDSWKMSKSNQSCGAF*MKGQYP
Trigger: TGGGTATTGTCCCTTCATCAAGAAAGCCCCACAGCT...TTGATTACTTTTTGACATTTTCCAGCTGTCAGGCATCACTGCGGCTAGTCCGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TTTCCCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTTCATCATCCATCCCGTaGCTTGCGAACTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: FPSITKSARYAAKSICPSSSSIP*LANSKI
Trigger: GATCTTTGAGTTCGCAAGCAACGGGATGGATGATGA...ACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGCTGGGAGACTCCATATaGAGTAAGACTTCCGCGGTT +
Preference number: 5 (lower is better)
Translates to: GNTHSKYICTTKHSALQGLGDSI*SKTSAV
Trigger: AACCGCGGAAGTCTTACTCAATATGGAGTCTCCCAG...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCCACCAGATAATAGAGTaGTTTCCGTGGCTGACATTT +
Preference number: 5 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLHQIIE*FPWLTF
Trigger: AAATGTCAGCCACGGAAACAACTCTATTATCTGGTG...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp CCAAGATTCCAGCCTGACTGCAAGGTGACTGTGGTTGCTAACACGGCAAACTCCCACCAGATAATAGAGTaGTTTCCGTGGCTGACATTT +
Preference number: 5 (lower is better)
Translates to: PRFQPDCKVTVVANTANSHQIIE*FPWLTF
Trigger: AAATGTCAGCCACGGAAACAACTCTATTATCTGGTG...GGAGTTTGCCGTGTTAGCAACCACAGTCACCTTGCAGTCAGGCTGGAATCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGGTCCACTTGATGTACTaGGGACAGGTGTTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLVHLMY*GQVFLS
Trigger: AGACAGAAACACCTGTCCCAAGTACATCAAGTGGAC...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATACGACATGCTGAATTTTaGGCTTCTCCCAAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GHSKGPQALIHITQSHQIRHAEF*ASPKKS
Trigger: GCTCTTCTTGGGAGAAGCCAAAAATTCAGCATGTCG...TATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGGAGACAAAGTCTGGTaGCCCAGAAGGCTCGGATTG +
Preference number: 5 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSGDKVW*PRRLGL
Trigger: CAATCCGAGCCTTCTGGGCAACCAGACTTTGTCTCC...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TACCAAGGACACAGCAAAGGTCCTCAGGCACTGATTCACATTACCCAAAGTCACAAATGCTGCTCAATTTaGCCTGGTGGGTCACACTTG +
Preference number: 5 (lower is better)
Translates to: YQGHSKGPQALIHITQSHKCCSI*PGGSHL
Trigger: CAAGTGTGACCCACCAGGCAAAATTGAGCAGCATTT...GTGACTTTGGGTAATGTGAATCAGTGCCTGAGGACCTTTGCTGTGTCCTTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp AGATTCGGAGGATCAAACTTGTACCCCATAGTCTCAGAGCAACTGAATCTCGGCTTCGGAGGATCAAACTaGTACCCCATAGTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RFGGSNLYPIVSEQLNLGFGGSN*YPIVSE
Trigger: CTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAA...GCCGAGATTCAGTTGCTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp GGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGCCCTCCAGGGGTCCGGATTCTCTTCTTaGATTTCCCAGTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: GNTHSKYICTTKHSALQGSGFSS*ISQSSW
Trigger: CCAAGAAGACTGGGAAATCAAAGAAGAGAATCCGGA...CCCCTGGAGGGCACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCATGACCACCAGGTCCTaGGGCATCTCCTTAAACTGG +
Preference number: 5 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSMTTRS*GISLNW
Trigger: CCAGTTTAAGGAGATGCCCAAGGACCTGGTGGTCAT...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACACTCCTAGGTGGATGTaGCTGGGCACTGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: TDSHYPKSPDNRVVSVADTPRWM*LGTEDA
Trigger: TGCATCTTCAGTGCCCAGCAACATCCACCTAGGAGT...GTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ACAGCCCTGTCCTCCCCAAAGAAACTAAGATACAGACCAACAAGTACACACAAGTTCGGAGGATCAAACTaGTACCCCATAGTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: TALSSPKKLRYRPTSTHKFGGSN*YPIVSE
Trigger: CTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAA...CTTGTGTGTACTTGTTGGTCTGTATCTTAGTTTCTTTGGGGAGGACAGGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAGCCTTGCCCTCAAACTaGGCAGGAGGGAGGCAAGCT +
Preference number: 5 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKALPSN*AGGRQA
Trigger: AGCTTGCCTCCCTCCTGCCAAGTTTGAGGGCAAGGC...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp CCTCCATCACCAAGTCAGCCCGTTATGCTGCCAAAAGCATATGCCCTAGTGCTCGAACAAACAAAAACATaGTTGATAGAGGGGCTATCT +
Preference number: 5 (lower is better)
Translates to: PPSPSQPVMLPKAYALVLEQTKT*LIEGLS
Trigger: AGATAGCCCCTCTATCAACAATGTTTTTGTTTGTTC...GAGCACTAGGGCATATGCTTTTGGCAGCATAACGGGCTGACTTGGTGATGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CAA 90 bp AAAACAAAATCCCTATCCCTGTGGCTGATCCACGGAGACATACACACACCCTTGTTTAAAAATCCATTGTaGGCCAGCCGTGGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: KTKSLSLWLIHGDIHTPLFKNPL*ASRGCS
Trigger: TGAGCAACCACGGCTGGCCAACAATGGATTTTTAAA...CAAGGGTGTGTGTATGTCTCCGTGGATCAGCCACAGGGATAGGGATTTTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308167.10
CDS-3UTR CAA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTGTACTTCGGTTGCCCTaGGTCTTCCGGATTCTCTTC +
Preference number: 5 (lower is better)
Translates to: IHITQSHQIIELFPWLTFVLRLP*VFRILF
Trigger: GAAGAGAATCCGGAAGACCAAGGGCAACCGAAGTAC...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACAGTGGTCCACTTGATGTACTaGGGACAGGTGTTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: CQLLETRIVNTFAQPNTVVHLMY*GQVFLS
Trigger: AGACAGAAACACCTGTCCCAAGTACATCAAGTGGAC...CACTGTGTTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCGTGGCTGACATTTCTTGCCCTGACCCCTTaGCTTATATGTCATGGGGCT +
Preference number: 5 (lower is better)
Translates to: IHITQSHQIIELFPWLTFLALTP*LICHGA
Trigger: AGCCCCATGACATATAAGCAAAGGGGTCAGGGCAAG...AAATGTCAGCCACGGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCTTCGGAGGATCAAACTaGTACCCCATAGTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSFGGSN*YPIVSE
Trigger: CTCTGAGACTATGGGGTACAAGTTTGATCCTCCGAA...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp TCCTCAGGCACTGATTCACATTACCCAAAGTCACCAGATAATAGAGTTGTTTCCTCCGGATTCTCTTCTTaGATTTCCCAGTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: SSGTDSHYPKSPDNRVVSSGFSS*ISQSSW
Trigger: CCAAGAAGACTGGGAAATCAAAGAAGAGAATCCGGA...GGAAACAACTCTATTATCTGGTGACTTTGGGTAATGTGAATCAGTGCCTGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAGTACTTCGGTTGCCCTaGGTCTTCCGGATTCTCTTC +
Preference number: 5 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKVLRLP*VFRILF
Trigger: GAAGAGAATCCGGAAGACCAAGGGCAACCGAAGTAC...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAAAGCTTGGACACAGCTTaGGAGTCCACCAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKSLDTA*ESTSLK
Trigger: CTTCAAACTGGTGGACTCCAAAGCTGTGTCCAAGCT...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS-3UTR CAA 90 bp ACTTTAATGCCAACTGCTGGAAACACGCATAGTAAATACATTTGCACAACCAAACACCAGATAATAGAGTaGTTTCCGTGGCTGACATTT +
Preference number: 5 (lower is better)
Translates to: TLMPTAGNTHSKYICTTKHQIIE*FPWLTF
Trigger: AAATGTCAGCCACGGAAACAACTCTATTATCTGGTG...TTTGGTTGTGCAAATGTATTTACTATGCGTGTTTCCAGCAGTTGGCATTAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 72 bp GCTGGGCCCTGCTGGTCCAGCCCCTGTGACCGTGGGTaGCGCCGGGTTGGTCGGACGGTTGGCCCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: AGPCWSSPCDRG*RRVGRTVGPSQ
Trigger: CTGGCTGGGGCCAACCGTCCGACCAACCCGGCGCCACCCACGGTCACAGGGGCTGGACCAGCAGGGCCCAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 72 bp GCTGGTCCAGCCCCTGTGACCGTGGGTGGCGCCGGGTaGGTCGGACGGTTGGCCCCAGCCAGAAGTTGGGGG +
Preference number: 6 (lower is better)
Translates to: AGPAPVTVGGAG*VGRLAPARSWG
Trigger: CCCCCAACTTCTGGCTGGGGCCAACCGTCCGACCAACCCGGCGCCACCCACGGTCACAGGGGCTGGACCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS GCA 72 bp AGCAATGACAGTCCCAGGGGGCTGAGAGCTGGGCCCTaGTGGTCCAGCCCCTGTGACCGTGGGTGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: SNDSPRGLRAGP*WSSPCDRGWRR
Trigger: CCGGCGCCACCCACGGTCACAGGGGCTGGACCAGCAGGGCCCAGCTCTCAGCCCCCTGGGACTGTCATTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 72 bp ACTGGCAGGAGGCCCATTGGTCAGCACCGTGGTCAGTaGGATCGTCTGCAGGGTCAGGGCCGAGCCCGACCC +
Preference number: 6 (lower is better)
Translates to: TGRRPIGQHRGQ*DRLQGQGRARP
Trigger: GGGTCGGGCTCGGCCCTGACCCTGCAGACGATCCCACTGACCACGGTGCTGACCAATGGGCCTCCTGCCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 72 bp CAGATCTGGATGAGACCCTGGAGCTGGTTCGCCGGGTaGTACTGGCAGAGGCCACAGAGGCCGTGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: QIWMRPWSWFAG*YWQRPQRPWRP
Trigger: AGGCCTCCACGGCCTCTGTGGCCTCTGCCAGTACCACCCGGCGAACCAGCTCCAGGGTCTCATCCAGATCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS CCA 72 bp GTTCAGCCACTGGGGTCAGCCCAACAGTGGGGCGGCTaGGAGGAGACAAAGTCTGGTTGCCCAGAAGGCTCG +
Preference number: 6 (lower is better)
Translates to: VQPLGSAQQWGG*EETKSGCPEGS
Trigger: CGAGCCTTCTGGGCAACCAGACTTTGTCTCCTCCCAGCCGCCCCACTGTTGGGCTGACCCCAGTGGCTGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 90 bp GTCAGGGCCGAGCCCGACCCCACGGGGGCCACTCCTAGGTGGATGTaGCTGGGCACTGAAGATGCACTCACAGCTTTGGTGAGCTTGACC +
Preference number: 6 (lower is better)
Translates to: VRAEPDPTGATPRWM*LGTEDALTALVSLT
Trigger: GGTCAAGCTCACCAAAGCTGTGAGTGCATCTTCAGTGCCCAGCAACATCCACCTAGGAGTGGCCCCCGTGGGGTCGGGCTCGGCCCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS CAA 90 bp GGTCAGGGCCGAGCCCGACCCACGGGGGCCACTCCTAGGTGGATGTaGCTGGGCACTGAAGATGCACTCACAGCTTTGGTGAGCTTGACC +
Preference number: 6 (lower is better)
Translates to: GQGRARPTGATPRWM*LGTEDALTALVSLT
Trigger: GGTCAAGCTCACCAAAGCTGTGAGTGCATCTTCAGTGCCCAGCAACATCCACCTAGGAGTGGCCCCCGTGGGTCGGGCTCGGCCCTGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615377.4
CDS CCA 72 bp AGCCCAACAGTGGGGCGGCTGGGAGGAGACAAAGTCTaGTTGCCCAGAAGGCTCGGATTGTGGGAACCCCTG +
Preference number: 6 (lower is better)
Translates to: SPTVGRLGGDKV*LPRRLGLWEPL
Trigger: CAGGGGTTCCCACAATCCGAGCCTTCTGGGCAACCAGACTTTGTCTCCTCCCAGCCGCCCCACTGTTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 72 bp GAGCCCGACCCCACGGGGGCCACTCCTAGGTGGATGTaGCTGGGCACTGAAGATGCACTCACAGCTTTGGTG +
Preference number: 6 (lower is better)
Translates to: EPDPTGATPRWM*LGTEDALTALV
Trigger: CACCAAAGCTGTGAGTGCATCTTCAGTGCCCAGCAACATCCACCTAGGAGTGGCCCCCGTGGGGTCGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS CAA 72 bp CGAGCCCGACCCACGGGGGCCACTCCTAGGTGGATGTaGCTGGGCACTGAAGATGCACTCACAGCTTTGGTG +
Preference number: 6 (lower is better)
Translates to: RARPTGATPRWM*LGTEDALTALV
Trigger: CACCAAAGCTGTGAGTGCATCTTCAGTGCCCAGCAACATCCACCTAGGAGTGGCCCCCGTGGGTCGGGCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615377.4
CDS CCA 72 bp CGTCACCATACCCTGAACATAGGAGGAGGACCTCAGTaGCCCCTCCTTGACCCTAGGGGCTGCTGTAGTGCC +
Preference number: 6 (lower is better)
Translates to: RHHTLNIGGGPQ*PLLDPRGCCSA
Trigger: GGCACTACAGCAGCCCCTAGGGTCAAGGAGGGGCCACTGAGGTCCTCCTCCTATGTTCAGGGTATGGTGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 72 bp CCAACAGTGGGGCGGCTGGGAGGAGACAAAGTCTGGTaGCCCAGAAGGCTCGGATTGTGGGAACCCCTGGAA +
Preference number: 6 (lower is better)
Translates to: PTVGRLGGDKVW*PRRLGLWEPLE
Trigger: TTCCAGGGGTTCCCACAATCCGAGCCTTCTGGGCAACCAGACTTTGTCTCCTCCCAGCCGCCCCACTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS GCA 72 bp GCACTTTCCTCTCTGGAGGCCTTCTCCTCCAGAGAATaGCCCTCCTGGTCACTAGTGTCACCCGCCCTGTTC +
Preference number: 6 (lower is better)
Translates to: ALSSLEAFSSRE*PSWSLVSPALF
Trigger: GAACAGGGCGGGTGACACTAGTGACCAGGAGGGGCATTCTCTGGAGGAGAAGGCCTCCAGAGAGGAAAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS GCA 72 bp GGAGGACCTCAGTGGCCCCTCCTTGACCCTAGGGGCTaGTGTAGTGCCAGAAGTCCTGATGAAGGCAGCAAT +
Preference number: 6 (lower is better)
Translates to: GGPQWPLLDPRG*CSARSPDEGSN
Trigger: ATTGCTGCCTTCATCAGGACTTCTGGCACTACAGCAGCCCCTAGGGTCAAGGAGGGGCCACTGAGGTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS GCA 72 bp CAACAGTGGGGCGGCTGGGAGGAGACAAAGTCTGGTTaGCCAGAAGGCTCGGATTGTGGGAACCCCTGGAAA +
Preference number: 6 (lower is better)
Translates to: QQWGGWEETKSG*PEGSDCGNPWK
Trigger: TTTCCAGGGGTTCCCACAATCCGAGCCTTCTGGGCAACCAGACTTTGTCTCCTCCCAGCCGCCCCACTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 90 bp TGCCCAGAAGGCTCGGATTGTGGGAACCCCTGGAAACCACCTGGGTaGGAAGTGGCTGAAGATGAGCCTGATCTCTCAGGAGCTCCCTCA +
Preference number: 6 (lower is better)
Translates to: CPEGSDCGNPWKPPG*EVAEDEPDLSGAPS
Trigger: TGAGGGAGCTCCTGAGAGATCAGGCTCATCTTCAGCCACTTCCAACCCAGGTGGTTTCCAGGGGTTCCCACAATCCGAGCCTTCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS GCA 72 bp TGCACTCACAGCTTTGGTGAGCTTGACCTGGCCCTCTaGTGGAGAGACGAGCATGGTGGAGGTAGTGGGGAT +
Preference number: 6 (lower is better)
Translates to: CTHSFGELDLAL*WRDEHGGGSGD
Trigger: ATCCCCACTACCTCCACCATGCTCGTCTCTCCAGCAGAGGGCCAGGTCAAGCTCACCAAAGCTGTGAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 72 bp ACTCACAGCTTTGGTGAGCTTGACCTGGCCCTCTGCTaGAGAGACGAGCATGGTGGAGGTAGTGGGGATCTC +
Preference number: 6 (lower is better)
Translates to: THSFGELDLALC*RDEHGGGSGDL
Trigger: GAGATCCCCACTACCTCCACCATGCTCGTCTCTCCAGCAGAGGGCCAGGTCAAGCTCACCAAAGCTGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 72 bp CTGGGCACTGAAGATGCACTCACAGCTTTGGTGAGCTaGACCTGGCCCTCTGCTGGAGAGACGAGCATGGTG +
Preference number: 6 (lower is better)
Translates to: LGTEDALTALVS*TWPSAGETSMV
Trigger: CACCATGCTCGTCTCTCCAGCAGAGGGCCAGGTCAAGCTCACCAAAGCTGTGAGTGCATCTTCAGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS TCA 72 bp AAAGTAGAGGCCGCTGGAACACTCTGGAGAACGAGCTaGGTGGGAGCAGTAGTACTGGCAGGAGGCCCATTG +
Preference number: 6 (lower is better)
Translates to: KVEAAGTLWRTS*VGAVVLAGGPL
Trigger: CAATGGGCCTCCTGCCAGTACTACTGCTCCCACTCAGCTCGTTCTCCAGAGTGTTCCAGCGGCCTCTACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS GCA 72 bp GGCAGGAAACAGGTAGTTGGGCAGAGTGACAGCTGGTaGAGGGTCCGAGTCTGGAAGCATTTCGGAGGTACT +
Preference number: 6 (lower is better)
Translates to: GRKQVVGQSDSW*RVRVWKHFGGT
Trigger: AGTACCTCCGAAATGCTTCCAGACTCGGACCCTGCACCAGCTGTCACTCTGCCCAACTACCTGTTTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 72 bp ACTCGCAGATGGCTGGAGACCGACATGCTGAATTTTTaGCTTCTCCCAAGAAGAGCTGCCCTTGCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: TRRWLETDMLNF*LLPRRAALALG
Trigger: CCCCAGGGCAAGGGCAGCTCTTCTTGGGAGAAGCCAAAAATTCAGCATGTCGGTCTCCAGCCATCTGCGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 72 bp GTTGGGCAGAGTGACAGCTGGTGCAGGGTCCGAGTCTaGAAGCATTTCGGAGGTACTGAAGATCTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: VGQSDSWCRVRV*KHFGGTEDLLL
Trigger: GAGAAGCAGATCTTCAGTACCTCCGAAATGCTTCCAGACTCGGACCCTGCACCAGCTGTCACTCTGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CCA 72 bp ACTGAAGATGCACTCACAGCTTTGGTGAGCTTGACCTaGCCCTCTGCTGGAGAGACGAGCATGGTGGAGGTA +
Preference number: 6 (lower is better)
Translates to: TEDALTALVSLT*PSAGETSMVEV
Trigger: TACCTCCACCATGCTCGTCTCTCCAGCAGAGGGCCAGGTCAAGCTCACCAAAGCTGTGAGTGCATCTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 72 bp GGGTCTTCCAGCTGGTGGATATCATCATCCATCCCGTaGCTTGCGAACTCAAAGATCAGGTCACTGGGCCCC +
Preference number: 6 (lower is better)
Translates to: GSSSWWISSSIP*LANSKIRSLGP
Trigger: GGGGCCCAGTGACCTGATCTTTGAGTTCGCAAGCAACGGGATGGATGATGATATCCACCAGCTGGAAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434609.1
CDS TCA 72 bp TCTGATCCTGCGTCATGCACAAGGTCCCGTCTGTTATaGTGCCATTGTGAACGTCGTCCAACTCCAGTCCCG +
Preference number: 6 (lower is better)
Translates to: SDPASCTRSRLL*CHCERRPTPVP
Trigger: CGGGACTGGAGTTGGACGACGTTCACAATGGCATCATAACAGACGGGACCTTGTGCATGACGCAGGATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000434609.1
ENST00000615377.4
CDS GCA 72 bp TTCCAGCTGGTGGATATCATCATCCATCCCGTTGCTTaGGAACTCAAAGATCAGGTCACTGGGCCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: FQLVDIIIHPVA*ELKDQVTGPLS
Trigger: GCTCAGGGGCCCAGTGACCTGATCTTTGAGTTCGCAAGCAACGGGATGGATGATGATATCCACCAGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434609.1
CDS GCA 72 bp GGTCTTCCAGCTGGTGGATATCATCATCCATCCCGTTaGTTGCGAACTCAAAGATCAGGTCACTGGGCCCCT +
Preference number: 6 (lower is better)
Translates to: GLPAGGYHHPSR*LRTQRSGHWAP
Trigger: AGGGGCCCAGTGACCTGATCTTTGAGTTCGCAAGCAACGGGATGGATGATGATATCCACCAGCTGGAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434609.1
CDS CCA 72 bp CTGCAAAGTGAAGGTGTCCTTGAAAGTAGAGGCCGCTaGAACACTCTGGAGAACGAGCTGAGTGGGAGCAGT +
Preference number: 6 (lower is better)
Translates to: LQSEGVLESRGR*NTLENELSGSS
Trigger: ACTGCTCCCACTCAGCTCGTTCTCCAGAGTGTTCCAGCGGCCTCTACTTTCAAGGACACCTTCACTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 72 bp CTTCCAGCTGGTGGATATCATCATCCATCCCGTTGCTaGCGAACTCAAAGATCAGGTCACTGGGCCCCTGAG +
Preference number: 6 (lower is better)
Translates to: LPAGGYHHPSRC*RTQRSGHWAPE
Trigger: CTCAGGGGCCCAGTGACCTGATCTTTGAGTTCGCAAGCAACGGGATGGATGATGATATCCACCAGCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434609.1
CDS CAA 90 bp GCTGACAACGGGATTATCAGAGCCCTCCAGAGCTGTGGGGCTTTCTaGATGAAGGGACAATACCCAGGTACTTTGGAGCCTAGAGCCTAC +
Preference number: 6 (lower is better)
Translates to: ADNGIIRALQSCGAF*MKGQYPGTLEPRAY
Trigger: GTAGGCTCTAGGCTCCAAAGTACCTGGGTATTGTCCCTTCATCAAGAAAGCCCCACAGCTCTGGAGGGCTCTGATAATCCCGTTGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS TCA 72 bp GTCATGCACAAGGTCCCGTCTGTTATGATGCCATTGTaGACGTCGTCCAACTCCAGTCCCGAGTACAGATGC +
Preference number: 6 (lower is better)
Translates to: VMHKVPSVMMPL*TSSNSSPEYRC
Trigger: GCATCTGTACTCGGGACTGGAGTTGGACGACGTTCACAATGGCATCATAACAGACGGGACCTTGTGCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000434609.1
ENST00000615377.4
CDS TCA 72 bp GCTTCTCATCCAGGATATCGCTGGGAGACTCCATATTaGGTAAGACTTCCGCGGTTGACATGGTGTGCGAGG +
Preference number: 6 (lower is better)
Translates to: ASHPGYRWETPY*VRLPRLTWCAR
Trigger: CCTCGCACACCATGTCAACCGCGGAAGTCTTACTCAATATGGAGTCTCCCAGCGATATCCTGGATGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 72 bp GGGGCTTTCTTGATGAAGGGACAATACCCAGGTACTTaGGAGCCTAGAGCCTACCCCCTGAGCTGCAGTAAA +
Preference number: 6 (lower is better)
Translates to: GAFLMKGQYPGT*EPRAYPLSCSK
Trigger: TTTACTGCAGCTCAGGGGGTAGGCTCTAGGCTCCAAAGTACCTGGGTATTGTCCCTTCATCAAGAAAGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308167.10
ENST00000335997.11
CDS CAA 72 bp CTGGGGTCAGTGACAGGTGAGGTACTTCGGTTGCCCTaGGTCTTCCGGATTCTCTTCTTTGATTTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: LGSVTGEVLRLP*VFRILFFDFPV
Trigger: GACTGGGAAATCAAAGAAGAGAATCCGGAAGACCAAGGGCAACCGAAGTACCTCACCTGTCACTGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 72 bp GGGATGCTGGGGTCAGTGACAGGTGAGGTACTTCGGTaGCCCTTGGTCTTCCGGATTCTCTTCTTTGATTTC +
Preference number: 6 (lower is better)
Translates to: GMLGSVTGEVLR*PLVFRILFFDF
Trigger: GAAATCAAAGAAGAGAATCCGGAAGACCAAGGGCAACCGAAGTACCTCACCTGTCACTGACCCCAGCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 90 bp CTGAAGATCTGCTTCTCATCCAGGATATCGCTGGGAGACTCCATATaGAGTAAGACTTCCGCGGTTGACATGGTGTGCGAGGTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: LKICFSSRISLGDSI*SKTSAVDMVCEVAS
Trigger: TGAGGCCACCTCGCACACCATGTCAACCGCGGAAGTCTTACTCAATATGGAGTCTCCCAGCGATATCCTGGATGAGAAGCAGATCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS GCA 72 bp GGTCTTCCAGCTGGTGGATATCATCATCCATCCCGTTaGTTGCGAACTCAAAGATCAGGTCACTGGGCTGTA +
Preference number: 6 (lower is better)
Translates to: GLPAGGYHHPSR*LRTQRSGHWAV
Trigger: TACAGCCCAGTGACCTGATCTTTGAGTTCGCAAGCAACGGGATGGATGATGATATCCACCAGCTGGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 72 bp TGCTTCTCATCCAGGATATCGCTGGGAGACTCCATATaGAGTAAGACTTCCGCGGTTGACATGGTGTGCGAG +
Preference number: 6 (lower is better)
Translates to: CFSSRISLGDSI*SKTSAVDMVCE
Trigger: CTCGCACACCATGTCAACCGCGGAAGTCTTACTCAATATGGAGTCTCCCAGCGATATCCTGGATGAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4
CDS CAA 90 bp AACACAGAGGGGTCTTCCAGCTGGTGGATATCATCATCCATCCCGTaGCTTGCGAACTCAAAGATCAGGTCACTGGGCTGTAGGGTAATA +
Preference number: 6 (lower is better)
Translates to: NTEGSSSWWISSSIP*LANSKIRSLGCRVI
Trigger: TATTACCCTACAGCCCAGTGACCTGATCTTTGAGTTCGCAAGCAACGGGATGGATGATGATATCCACCAGCTGGAAGACCCCTCTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308167.10
ENST00000335997.11
ENST00000615377.4