Pregenerated sensors for ELF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000109381Ensembl transcript IDs: ENST00000358635.7, ENST00000379550.5, ENST00000394235.6, ENST00000511006.1, ENST00000511184.5, ENST00000514606.1, ENST00000515489.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGATCACGAGGTCAAGACATCGAGACCATCCTGGCTAACACAGTaGAACCCGGTCTCAGCATTGTCTTCCTTCTGGCTCAATCTGTTT | + |
|
Preference number: 1 (lower is better) Translates to: VDHEVKTSRPSWLTQ*NPVSALSSFWLNLF Trigger: AAACAGATTGAGCCAGAAGGAAGACAATGCTGAGACCGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATGTCTTGACCTCGTGATCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| 3UTR-3UTR GCA 90 bp | AACATAGGCCTTCAGATGAAGCCTAGCCAAAATAATCAGTGCTTCTTGTCTCAAAAAGGAGTCCTTTTGTaGCACAGGGAGGATTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: NIGLQMKPSQNNQCFLSQKGVLL*HREDFC Trigger: ACAGAAATCCTCCCTGTGGCACAAAAGGACTCCTTT...TTGAGACAAGAAGCACTGATTATTTTGGCTAGGCTTCATCTGAAGGCCTATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCTCCTCTTGAACCAAGTTCTTGGTTTCCTCTTCAAAAGAAGTTTTTCATTTCTTCTACCTCCCTGTaGCAACAATATTTTCTAATT | + |
|
Preference number: 2 (lower is better) Translates to: LSPLEPSSWFPLQKKFFISSTSL*QQYFLI Trigger: AATTAGAAAATATTGTTGCCACAGGGAGGTAGAAGA...AATGAAAAACTTCTTTTGAAGAGGAAACCAAGAACTTGGTTCAAGAGGAGAAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| 3UTR TCA 72 bp | GAGGTCAAGACATCGAGACCATCCTGGCTAACACAGTaGAACCCGGTCTCAGCATTGTCTTCCTTCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: EVKTSRPSWLTQ*NPVSALSSFWL Trigger: GAGCCAGAAGGAAGACAATGCTGAGACCGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATGTCTTGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| 3UTR GCA 72 bp | TGGCAACAATATTTTCTAATTAAAGGAGTCCTTTTGTaGCACAGGGAGGATTTCTGTAGTCCCAGCCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: WQQYFLIKGVLL*HREDFCSPSHL Trigger: CAAGTGGCTGGGACTACAGAAATCCTCCCTGTGGCACAAAAGGACTCCTTTAATTAGAAAATATTGTTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAGAACATAGGCCTTCAGATGAAGCCTAGCCAAAATAATCAGTGCTTCTTGAATTTCTTTCTCCTCTaGAACCAAGTTCTTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SQNIGLQMKPSQNNQCFLNFFLL*NQVLGF Trigger: GAAACCAAGAACTTGGTTCAAGAGGAGAAAGAAATT...CAAGAAGCACTGATTATTTTGGCTAGGCTTCATCTGAAGGCCTATGTTCTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| 3UTR GCA 72 bp | ATAGGCCTTCAGATGAAGCCTAGCCAAAATAATCAGTaGTTCTTGTCTCAAGTAAATAACTTGCACCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: IGLQMKPSQNNQ*FLSQVNNLHLI Trigger: TATCAGGTGCAAGTTATTTACTTGAGACAAGAAGCACTGATTATTTTGGCTAGGCTTCATCTGAAGGCCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCCTCTTGAACCAAGTTCTTGGTTTCCTCTTCAAAAGAAGTTTTTCATTACTAGCCGCCGCCGTTaGCCGAGCGTCCGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPLEPSSWFPLQKKFFITSRRR*PSVRRE Trigger: CTCCCTCCGGACGCTCGGCCAACGGCGGCGGCTAGT...AATGAAAAACTTCTTTTGAAGAGGAAACCAAGAACTTGGTTCAAGAGGAGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR CCA 90 bp | CCCGGTCTCAGCATTGTCTTCCTTCTGGCTCAATCTGTTTCACCTTCAGGTAATGAACCAGTAGTTCTTTaGAACTGCTCTCCGCGACGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLSIVFLLAQSVSPSGNEPVVL*NCSPRR Trigger: GCGTCGCGGAGAGCAGTTCCAAAGAACTACTGGTTC...ATTACCTGAAGGTGAAACAGATTGAGCCAGAAGGAAGACAATGCTGAGACCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCCTCTTGAACCAAGTTCTTGGTTTCCTCTTCAAAAGAAGTTTTTCATTGCTCTCCGCGACGCCTaGGAAGACCGCGGCGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSPLEPSSWFPLQKKFFIALRDA*EDRGVL Trigger: AAGGACGCCGCGGTCTTCCCAGGCGTCGCGGAGAGC...AATGAAAAACTTCTTTTGAAGAGGAAACCAAGAACTTGGTTCAAGAGGAGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR TCA 90 bp | TTAAAGGAGTCCTTTTGTGCCACAGGGAGGATTTCTGTAGTCCCAGCCACTTGGTGTAAGACGGTAAACTaGATGCACTGGCTTCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LKESFCATGRISVVPATWCKTVN*MHWLLI Trigger: GATCAGAAGCCAGTGCATTCAGTTTACCGTCTTACA...CCAAGTGGCTGGGACTACAGAAATCCTCCCTGTGGCACAAAAGGACTCCTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR TCA 90 bp | AACATAGGCCTTCAGATGAAGCCTAGCCAAAATAATCAGTGCTTCTTGTCTCAAGCCTGGGTGACAGAGTaGGATTCCACCTGTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NIGLQMKPSQNNQCFLSQAWVTE*DSTCFH Trigger: GTGGAAACAGGTGGAATCTCACTCTGTCACCCAGGC...TTGAGACAAGAAGCACTGATTATTTTGGCTAGGCTTCATCTGAAGGCCTATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR GCA 90 bp | CCCGGTCTCAGCATTGTCTTCCTTCTGGCTCAATCTGTTTCACCTTCAGGTAATTGGCTCCACAATCACTaGTGGATATTCAGAAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGLSIVFLLAQSVSPSGNWLHNH*WIFRNL Trigger: AAGGTTTCTGAATATCCAGCAGTGATTGTGGAGCCA...ATTACCTGAAGGTGAAACAGATTGAGCCAGAAGGAAGACAATGCTGAGACCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR CCA 90 bp | AACATAGGCCTTCAGATGAAGCCTAGCCAAAATAATCAGTGCTTCTTGTCTCAATCTGGCACTTGGAACTaGCTCCACAATCACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NIGLQMKPSQNNQCFLSQSGTWN*LHNHCW Trigger: CCAGCAGTGATTGTGGAGCCAGTTCCAAGTGCCAGA...TTGAGACAAGAAGCACTGATTATTTTGGCTAGGCTTCATCTGAAGGCCTATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR CCA 90 bp | TTAAAGGAGTCCTTTTGTGCCACAGGGAGGATTTCTGTAGTCCCAGCCACTTGGCTTGAACCAAGTTCTTaGTTTCCTCTTCAAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKESFCATGRISVVPATWLEPSS*FPLQKK Trigger: CTTCTTTTGAAGAGGAAACCAAGAACTTGGTTCAAG...CCAAGTGGCTGGGACTACAGAAATCCTCCCTGTGGCACAAAAGGACTCCTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR GCA 90 bp | TCCCAGAACATAGGCCTTCAGATGAAGCCTAGCCAAAATAATCAGTGCTTCTTGAGGTTCACTGATGGTTaGCAGTGTTATAGGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQNIGLQMKPSQNNQCFLRFTDG*QCYRFA Trigger: TGCAAACCTATAACACTGGCAACCATCAGTGAACCT...CAAGAAGCACTGATTATTTTGGCTAGGCTTCATCTGAAGGCCTATGTTCTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGAGTCCTTTTGTGCCACAGGGAGGATTTCTGTAGTCCCAGCCACTTGGAACTTCTTGTTCTTCTaGCACATCTTGCATCATATA | + |
|
Preference number: 4 (lower is better) Translates to: LKESFCATGRISVVPATWNFLFF*HILHHI Trigger: TATATGATGCAAGATGTGGCAGAAGAACAAGAAGTT...CCAAGTGGCTGGGACTACAGAAATCCTCCCTGTGGCACAAAAGGACTCCTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR TCA 90 bp | TCCCAGAACATAGGCCTTCAGATGAAGCCTAGCCAAAATAATCAGTGCTTCTTGGGAAGAGCTAAAATCTaGACCAGTAGTTCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQNIGLQMKPSQNNQCFLGRAKI*TSSSLE Trigger: TTCCAAAGAACTACTGGTTCAGATTTTAGCTCTTCC...CAAGAAGCACTGATTATTTTGGCTAGGCTTCATCTGAAGGCCTATGTTCTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR TCA 90 bp | TCCCAGAACATAGGCCTTCAGATGAAGCCTAGCCAAAATAATCAGTGCTTCTTGATTTCTTTCTCCTCTTaGACCAAGTTCTTGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQNIGLQMKPSQNNQCFLISFSS*TKFLVS Trigger: GGAAACCAAGAACTTGGTTCAAGAGGAGAAAGAAAT...CAAGAAGCACTGATTATTTTGGCTAGGCTTCATCTGAAGGCCTATGTTCTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| 3UTR CAA 72 bp | CTTCAGATGAAGCCTAGCCAAAATAATCAGTGCTTCTaGTCTCAAGTAAATAACTTGCACCTGATAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQMKPSQNNQCF*SQVNNLHLIAS Trigger: GGAGGCTATCAGGTGCAAGTTATTTACTTGAGACAAGAAGCACTGATTATTTTGGCTAGGCTTCATCTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR TCA 90 bp | AACATAGGCCTTCAGATGAAGCCTAGCCAAAATAATCAGTGCTTCTTGTCTCAAGTCATTGTTATTCCCTaGGGAAGCTTCAAACGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: NIGLQMKPSQNNQCFLSQVIVIP*GSFKRY Trigger: ATAGCGTTTGAAGCTTCCTCAGGGAATAACAATGAC...TTGAGACAAGAAGCACTGATTATTTTGGCTAGGCTTCATCTGAAGGCCTATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCCTCTTGAACCAAGTTCTTGGTTTCCTCTTCAAAAGAAGTTTTTCATTACTGTCAACCACTGCTaGTGTCATTGTTATTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPLEPSSWFPLQKKFFITVNHC*CHCYSL Trigger: CAGGGAATAACAATGACATCAGCAGTGGTTGACAGT...AATGAAAAACTTCTTTTGAAGAGGAAACCAAGAACTTGGTTCAAGAGGAGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR TCA 90 bp | AACATAGGCCTTCAGATGAAGCCTAGCCAAAATAATCAGTGCTTCTTGTCTCAAGACACAGGATTTATATaGTCTTACAATAGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NIGLQMKPSQNNQCFLSQDTGFI*SYNSGL Trigger: GAGACCACTATTGTAAGATCATATAAATCCTGTGTC...TTGAGACAAGAAGCACTGATTATTTTGGCTAGGCTTCATCTGAAGGCCTATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCTCTTGAACCAAGTTCTTGGTTTCCTCTTCAAAAGAAGTTTTTCATTAAAGGAGTCCTTTTGTaGCACAGGGAGGATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPLEPSSWFPLQKKFFIKGVLL*HREDFC Trigger: ACAGAAATCCTCCCTGTGGCACAAAAGGACTCCTTT...AATGAAAAACTTCTTTTGAAGAGGAAACCAAGAACTTGGTTCAAGAGGAGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR TCA 90 bp | TTTCTCCTCTTGAACCAAGTTCTTGGTTTCCTCTTCAAAAGAAGTTTTTCATTCTACAATAGTGGTCTCTaGCCTATACAATACTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: FLLLNQVLGFLFKRSFSFYNSGL*PIQYLT Trigger: AGTCAAGTATTGTATAGGTCAGAGACCACTATTGTA...GAATGAAAAACTTCTTTTGAAGAGGAAACCAAGAACTTGGTTCAAGAGGAGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS-3UTR CCA 90 bp | TTTCTCCTCTTGAACCAAGTTCTTGGTTTCCTCTTCAAAAGAAGTTTTTCATTCTCTTCTACCTCCCTGTaGCAACAATATTTTCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: FLLLNQVLGFLFKRSFSFSSTSL*QQYFLI Trigger: AATTAGAAAATATTGTTGCCACAGGGAGGTAGAAGA...GAATGAAAAACTTCTTTTGAAGAGGAAACCAAGAACTTGGTTCAAGAGGAGAAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS CCA 90 bp | ACTTGGGAGGCTACAAGCACAGTAGCGCAAGGCTGCAGTGAGGTATaGTCATGCCACTGCATTCTAGCCCTGTCTGTAAAAATAAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TWEATSTVAQGCSEV*SCHCILALSVKISQ Trigger: TTGACTTATTTTTACAGACAGGGCTAGAATGCAGTGGCATGACCATACCTCACTGCAGCCTTGCGCTACTGTGCTTGTAGCCTCCCAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514606.1 |
||
| CDS CCA 90 bp | TTCCATATGAGTCTGTCCTGGCTGAAGGTATGGTTCAGTCTTGTCTaGATGACGCTTCAGCTTTCTTGTCTGGTCTGTGACTGCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: FHMSLSWLKVWFSLV*MTLQLSCLVCDCHL Trigger: AAGGTGGCAGTCACAGACCAGACAAGAAAGCTGAAGCGTCATCCAGACAAGACTGAACCATACCTTCAGCCAGGACAGACTCATATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515489.1 |
||
| CDS CCA 90 bp | CATCATCATAAACCAGAACCTGGGCTGCATAGCCCTGCTCTAATCTaGCACTTGGAACTGGCTCCACAATCACTGCTGGATATTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HHHKPEPGLHSPALI*HLELAPQSLLDIQK Trigger: TTTCTGAATATCCAGCAGTGATTGTGGAGCCAGTTCCAAGTGCCAGATTAGAGCAGGGCTATGCAGCCCAGGTTCTGGTTTATGATGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379550.5 ENST00000394235.6 ENST00000511184.5 |
||
| CDS TCA 90 bp | CTAAGCATCCTTCACTATTTTCACAACTTGGGAAGAGCTAAAATCTaGACCAGTAGTTCTTTGGAACTGCTCTCCGCGACGCCTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSILHYFHNLGRAKI*TSSSLELLSATPGK Trigger: CTTCCCAGGCGTCGCGGAGAGCAGTTCCAAAGAACTACTGGTTCAGATTTTAGCTCTTCCCAAGTTGTGAAAATAGTGAAGGATGCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000394235.6 ENST00000511006.1 ENST00000511184.5 |
||
| CDS CCA 90 bp | CTCTTTAGAGAGCTTTTCCATATGAGTCTGTCCTGGCTGAAGGTATaGTTCAGTCTTGTCTGGATGACGCTTCAGCTTTCTTGTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LFRELFHMSLSWLKV*FSLVWMTLQLSCLV Trigger: GACCAGACAAGAAAGCTGAAGCGTCATCCAGACAAGACTGAACCATACCTTCAGCCAGGACAGACTCATATGGAAAAGCTCTCTAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515489.1 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGAGTCCTTTTGTGCCACAGGGAGGATTTCTGTAGTCCCAGCCACTTGGAATTTCTTTCTCCTCTaGAACCAAGTTCTTGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKESFCATGRISVVPATWNFFLL*NQVLGF Trigger: GAAACCAAGAACTTGGTTCAAGAGGAGAAAGAAATT...CCAAGTGGCTGGGACTACAGAAATCCTCCCTGTGGCACAAAAGGACTCCTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS TCA 90 bp | ATTGCTGGAAAGCTCCAAAATAGTACCTCCACTGTCAACCACTGCTaGTGTCATTGTTATTCCCTGAGGAAGCTTCAAACGCTATTAATC | + |
|
Preference number: 5 (lower is better) Translates to: IAGKLQNSTSTVNHC*CHCYSLRKLQTLLI Trigger: GATTAATAGCGTTTGAAGCTTCCTCAGGGAATAACAATGACATCAGCAGTGGTTGACAGTGGAGGTACTATTTTGGAGCTTTCCAGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000379550.5 ENST00000394235.6 ENST00000511006.1 ENST00000511184.5 |
||
| CDS CCA 90 bp | CCTTTGGACTTTTTCCAAGTCCCTATATCCCCCATGATACAACTATaGTTACAGAATCTCTGTGGTGTAGGAACTGGGCACAGATATTTT | + |
|
Preference number: 5 (lower is better) Translates to: PLDFFQVPISPMIQL*LQNLCGVGTGHRYF Trigger: AAAATATCTGTGCCCAGTTCCTACACCACAGAGATTCTGTAACCATAGTTGTATCATGGGGGATATAGGGACTTGGAAAAAGTCCAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000514606.1 |
||
| CDS TCA 90 bp | AGAAAAGCCCAGCTTGTGGAAATGATTTGTCAGCCAATAGACAATTaGGCACCAGTCGAACATGTTAAACTAAGCATTTATCATGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RKAQLVEMICQPIDN*APVEHVKLSIYHGG Trigger: CCCTCCATGATAAATGCTTAGTTTAACATGTTCGACTGGTGCTCAATTGTCTATTGGCTGACAAATCATTTCCACAAGCTGGGCTTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515489.1 |
||
| CDS GCA 90 bp | TGCTTCCACTGTTTCCACATTCTCGGTCTCAACTTCTTGTTCTTCTaGCACATCTTGCATCATATAAGTCTCATCATCATAAACCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CFHCFHILGLNFLFF*HILHHISLIIINQN Trigger: GTTCTGGTTTATGATGATGAGACTTATATGATGCAAGATGTGGCAGAAGAACAAGAAGTTGAGACCGAGAATGTGGAAACAGTGGAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379550.5 ENST00000394235.6 |
||
| CDS-3UTR CAA 90 bp | TTTCTCCTCTTGAACCAAGTTCTTGGTTTCCTCTTCAAAAGAAGTTTTTCATTCCCACTGCTGATGTCATaGTTATTCCCTGAGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLLLNQVLGFLFKRSFSFPLLMS*LFPEEA Trigger: AGCTTCCTCAGGGAATAACAATGACATCAGCAGTGG...GAATGAAAAACTTCTTTTGAAGAGGAAACCAAGAACTTGGTTCAAGAGGAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS CCA 90 bp | TGGGTAGCTATATATGAGGATGGGTGCTATTATCCTGTAAGTCAATaGTTCTTAAGGAGGATATGTATCAGACATCCTTTGGACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WVAIYEDGCYYPVSQ*FLRRICIRHPLDFF Trigger: GAAAAAGTCCAAAGGATGTCTGATACATATCCTCCTTAAGAACCATTGACTTACAGGATAATAGCACCCATCCTCATATATAGCTACCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514606.1 |
||
| CDS-3UTR CAA 90 bp | TTTCTCCTCTTGAACCAAGTTCTTGGTTTCCTCTTCAAAAGAAGTTTTTCATTCTTCTTCTGCCACATCTaGCATCATATAAGTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: FLLLNQVLGFLFKRSFSFFFCHI*HHISLI Trigger: GATGAGACTTATATGATGCAAGATGTGGCAGAAGAA...GAATGAAAAACTTCTTTTGAAGAGGAAACCAAGAACTTGGTTCAAGAGGAGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511184.5 |
||
| CDS GCA 72 bp | CTCACGCACTCGCACACACTCCGACGCCCGGATCCTTaGGCGTCCTCCGACAGGAAGCCGAGGCCGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LTHSHTLRRPDP*ASSDRKPRPAR Trigger: GCGGGCCGGCCTCGGCTTCCTGTCGGAGGACGCGCAAGGATCCGGGCGTCGGAGTGTGTGCGAGTGCGTGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358635.7 |
||
| CDS TCA 72 bp | TTGGGAGGCTACAAGCACAGTAGCGCAAGGCTGCAGTaGGGTATGGTCATGCCACTGCATTCTAGCCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGGYKHSSARLQ*GMVMPLHSSPV Trigger: GACAGGGCTAGAATGCAGTGGCATGACCATACCTCACTGCAGCCTTGCGCTACTGTGCTTGTAGCCTCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514606.1 |
||
| CDS CAA 72 bp | GAACCTGGGCTGCATAGCCCTGCTCTAATCTGGCACTaGGAACTGGCTCCACAATCACTGCTGGATATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EPGLHSPALIWH*ELAPQSLLDIQ Trigger: CTGAATATCCAGCAGTGATTGTGGAGCCAGTTCCAAGTGCCAGATTAGAGCAGGGCTATGCAGCCCAGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379550.5 ENST00000394235.6 ENST00000511184.5 |
||
| CDS CCA 72 bp | AGTCTGTCCTGGCTGAAGGTATGGTTCAGTCTTGTCTaGATGACGCTTCAGCTTTCTTGTCTGGTCTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLSWLKVWFSLV*MTLQLSCLVCD Trigger: GTCACAGACCAGACAAGAAAGCTGAAGCGTCATCCAGACAAGACTGAACCATACCTTCAGCCAGGACAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515489.1 |
||
| CDS GCA 72 bp | AGCACAGTAGCGCAAGGCTGCAGTGAGGTATGGTCATaGCACTGCATTCTAGCCCTGTCTGTAAAAATAAGT | + |
|
Preference number: 6 (lower is better) Translates to: STVAQGCSEVWS*HCILALSVKIS Trigger: ACTTATTTTTACAGACAGGGCTAGAATGCAGTGGCATGACCATACCTCACTGCAGCCTTGCGCTACTGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514606.1 |
||
| CDS CAA 90 bp | CATAAACCAGAACCTGGGCTGCATAGCCCTGCTCTAATCTGGCACTaGGAACTGGCTCCACAATCACTGCTGGATATTCAGAAACCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HKPEPGLHSPALIWH*ELAPQSLLDIQKPF Trigger: AAAAGGTTTCTGAATATCCAGCAGTGATTGTGGAGCCAGTTCCAAGTGCCAGATTAGAGCAGGGCTATGCAGCCCAGGTTCTGGTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379550.5 ENST00000394235.6 ENST00000511184.5 |
||
| CDS CCA 72 bp | GAGCTTTTCCATATGAGTCTGTCCTGGCTGAAGGTATaGTTCAGTCTTGTCTGGATGACGCTTCAGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ELFHMSLSWLKV*FSLVWMTLQLS Trigger: AGAAAGCTGAAGCGTCATCCAGACAAGACTGAACCATACCTTCAGCCAGGACAGACTCATATGGAAAAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515489.1 |
||
| CDS CCA 72 bp | TTTTTCCAAGTCCCTATATCCCCCATGATACAACTATaGTTACAGAATCTCTGTGGTGTAGGAACTGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FFQVPISPMIQL*LQNLCGVGTGH Trigger: GTGCCCAGTTCCTACACCACAGAGATTCTGTAACCATAGTTGTATCATGGGGGATATAGGGACTTGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000514606.1 |
||
| CDS CAA 90 bp | TGTTTCCACATTCTCGGTCTCAACTTCTTGTTCTTCTGCCACATCTaGCATCATATAAGTCTCATCATCATAAACCAGAACCTGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CFHILGLNFLFFCHI*HHISLIIINQNLGC Trigger: GCAGCCCAGGTTCTGGTTTATGATGATGAGACTTATATGATGCAAGATGTGGCAGAAGAACAAGAAGTTGAGACCGAGAATGTGGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379550.5 ENST00000394235.6 ENST00000511184.5 |
||
| CDS CAA 90 bp | CCTGTAAGTCAATGGTTCTTAAGGAGGATATGTATCAGACATCCTTaGGACTTTTTCCAAGTCCCTATATCCCCCATGATACAACTATGG | + |
|
Preference number: 6 (lower is better) Translates to: PVSQWFLRRICIRHP*DFFQVPISPMIQLW Trigger: CCATAGTTGTATCATGGGGGATATAGGGACTTGGAAAAAGTCCAAAGGATGTCTGATACATATCCTCCTTAAGAACCATTGACTTACAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000514606.1 |
||
| CDS GCA 72 bp | TGTTTCCACATTCTCGGTCTCAACTTCTTGTTCTTCTaGCACATCTTGCATCATATAAGTCTCATCATCATA | + |
|
Preference number: 6 (lower is better) Translates to: CFHILGLNFLFF*HILHHISLIII Trigger: TATGATGATGAGACTTATATGATGCAAGATGTGGCAGAAGAACAAGAAGTTGAGACCGAGAATGTGGAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379550.5 ENST00000394235.6 ENST00000511184.5 |
||
| CDS CAA 72 bp | ATTCTCGGTCTCAACTTCTTGTTCTTCTGCCACATCTaGCATCATATAAGTCTCATCATCATAAACCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ILGLNFLFFCHI*HHISLIIINQN Trigger: GTTCTGGTTTATGATGATGAGACTTATATGATGCAAGATGTGGCAGAAGAACAAGAAGTTGAGACCGAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379550.5 ENST00000394235.6 ENST00000511184.5 |
||
| CDS CCA 72 bp | ATATATGAGGATGGGTGCTATTATCCTGTAAGTCAATaGTTCTTAAGGAGGATATGTATCAGACATCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IYEDGCYYPVSQ*FLRRICIRHPL Trigger: CAAAGGATGTCTGATACATATCCTCCTTAAGAACCATTGACTTACAGGATAATAGCACCCATCCTCATATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514606.1 |
||
| CDS CAA 72 bp | GTTCCAACAATTCACGTAAGCCCTGCAATACCTTCCTaGACCTTCTATTACCTAAATTATATAAGGATACAC | + |
|
Preference number: 6 (lower is better) Translates to: VPTIHVSPAIPS*TFYYLNYIRIH Trigger: GTGTATCCTTATATAATTTAGGTAATAGAAGGTCAAGGAAGGTATTGCAGGGCTTACGTGAATTGTTGGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511006.1 |
||
| CDS CAA 90 bp | TATATGTATGTTCCAACAATTCACGTAAGCCCTGCAATACCTTCCTaGACCTTCTATTACCTAAATTATATAAGGATACACGACATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: YMYVPTIHVSPAIPS*TFYYLNYIRIHDMY Trigger: GTACATGTCGTGTATCCTTATATAATTTAGGTAATAGAAGGTCAAGGAAGGTATTGCAGGGCTTACGTGAATTGTTGGAACATACATATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511006.1 |
||
| CDS CCA 72 bp | CTTATTCATGAAAGTGATAAATTTTCGGTTATCAGATaGGCAGACAGAACACATCTAAAACCACTACTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LIHESDKFSVIR*ADRTHLKPLLK Trigger: TTTCAGTAGTGGTTTTAGATGTGTTCTGTCTGCCCATCTGATAACCGAAAATTTATCACTTTCATGAATAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514606.1 |
||