RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000120690

Ensembl transcript IDs: ENST00000239882.7, ENST00000405737.2, ENST00000498824.4, ENST00000625359.1, ENST00000635415.1

Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTAGCTGCTTCTCCCTCTGGGACAGCCTGTACTGGCTGTACTACATaGACAGTCCGGAAGAGCTGGGTAGGATATGGAGACTGCGTGGGC +
Preference number: 1 (lower is better)
Translates to: LAASPSGTACTGCTT*TVRKSWVGYGDCVG
Trigger: GCCCACGCAGTCTCCATATCCTACCCAGCTCTTCCGGACTGTTCATGTAGTACAGCCAGTACAGGCTGTCCCAGAGGGAGAAGCAGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CCA 90 bp CATGGTACTGGTTCTAGCTGCTTCTCCCTCTGGGACAGCCTGTACTaGCTGTACTACATGAACAGTCCGGAAGAGCTGGGTAGGATATGG +
Preference number: 1 (lower is better)
Translates to: HGTGSSCFSLWDSLY*LYYMNSPEELGRIW
Trigger: CCATATCCTACCCAGCTCTTCCGGACTGTTCATGTAGTACAGCCAGTACAGGCTGTCCCAGAGGGAGAAGCAGCTAGAACCAGTACCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR GCA 90 bp TCTGGTGATGAGGCTCCCGGTGAGTCTGCATATTTTTCTTGCACCTaGTGTGTTTCCATCACTTCAGGAATCCCATCTAATGTGACGGAC +
Preference number: 1 (lower is better)
Translates to: SGDEAPGESAYFSCT*CVSITSGIPSNVTD
Trigger: GTCCGTCACATTAGATGGGATTCCTGAAGTGATGGAAACACAGCAGGTGCAAGAAAAATATGCAGACTCACCGGGAGCCTCATCACCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR TCA 90 bp CCAAGACAATTGAAGGAGGAGAGCCCGCCTTTTGTGACTGCAGCATaGCATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGG +
Preference number: 1 (lower is better)
Translates to: PRQLKEESPPFVTAA*HFLSVLSWAVMMEW
Trigger: CCATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTCACAAAAGGCGGGCTCTCCTCCTTCAATTGTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CCA 90 bp TGGCTCCTCCTTTTACCCCTGGACTTGAAGATACTCTCGACCGGCTaGTTTGATTCCTATTTGAAGTGGCTGATGAAGATAGCGATGGAT +
Preference number: 1 (lower is better)
Translates to: WLLLLPLDLKILSTG*FDSYLKWLMKIAMD
Trigger: ATCCATCGCTATCTTCATCAGCCACTTCAAATAGGAATCAAACCAGCCGGTCGAGAGTATCTTCAAGTCCAGGGGTAAAAGGAGGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR TCA 90 bp CCTCCTTTTACCCCTGGACTTGAAGATACTCTCGACCGGCTGGTTTaGTTCCTATTTGAAGTGGCTGATGAAGATAGCGATGGATCTGAA +
Preference number: 1 (lower is better)
Translates to: PPFTPGLEDTLDRLV*FLFEVADEDSDGSE
Trigger: TTCAGATCCATCGCTATCTTCATCAGCCACTTCAAATAGGAATCAAACCAGCCGGTCGAGAGTATCTTCAAGTCCAGGGGTAAAAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CCA 90 bp GAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTaGAACTTGGGTTGGAGCCTGTATAGTCCTAATACTCTGAACGGA +
Preference number: 1 (lower is better)
Translates to: ECYCMQLLIPRRHNH*NLGWSLYSPNTLNG
Trigger: TCCGTTCAGAGTATTAGGACTATACAGGCTCCAACCCAAGTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CCA 90 bp GACTTGAAGATACTCTCGACCGGCTGGTTTGATTCCTATTTGAAGTaGCTGATGAAGATAGCGATGGATCTGAAGACTCTATGCTGGAAC +
Preference number: 1 (lower is better)
Translates to: DLKILSTGWFDSYLK*LMKIAMDLKTLCWN
Trigger: GTTCCAGCATAGAGTCTTCAGATCCATCGCTATCTTCATCAGCCACTTCAAATAGGAATCAAACCAGCCGGTCGAGAGTATCTTCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR TCA 90 bp ACTGTCATGGGCTGTGATGATGGAATGGCTTGTAAAATAAACTTCTaGGATCCAGTACCTGCTGATGGATCTGTGCTGGCTATAACTGTT +
Preference number: 1 (lower is better)
Translates to: TVMGCDDGMACKINF*DPVPADGSVLAITV
Trigger: AACAGTTATAGCCAGCACAGATCCATCAGCAGGTACTGGATCTCAGAAGTTTATTTTACAAGCCATTCCATCATCACAGCCCATGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CCA 90 bp AGAAGTAAATCCATTGGAACTGGACACTACCATCACATAAGGCTGTaGCTGCTGCTCCGTTTTCTCAGTGTTCTCTTTCAAATGATCTTC +
Preference number: 1 (lower is better)
Translates to: RSKSIGTGHYHHIRL*LLLRFLSVLFQMIF
Trigger: GAAGATCATTTGAAAGAGAACACTGAGAAAACGGAGCAGCAGCCACAGCCTTATGTGATGGTAGTGTCCAGTTCCAATGGATTTACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR TCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACACTGGCTGTACTACATaGACAGTCCGGAAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNTGCTT*TVRKSW
Trigger: CCAGCTCTTCCGGACTGTTCATGTAGTACAGCCAGT...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR GCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACGGAGACTGCGTGGGCTaGACTGTCCTCAAAACTTCT +
Preference number: 2 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNGDCVG*TVLKTS
Trigger: AGAAGTTTTGAGGACAGTGCAGCCCACGCAGTCTCC...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACGGACACATGGGTGACTaGGGCAACAACCATGTCATC +
Preference number: 2 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNGHMGD*GNNHVI
Trigger: GATGACATGGTTGTTGCCCCAGTCACCCATGTGTCC...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CAA 90 bp CCCCTGGACTTGAAGATACTCTCGACCGGCTGGTTTGATTCCTATTaGAAGTGGCTGATGAAGATAGCGATGGATCTGAAGACTCTATGC +
Preference number: 2 (lower is better)
Translates to: PLDLKILSTGWFDSY*KWLMKIAMDLKTLC
Trigger: GCATAGAGTCTTCAGATCCATCGCTATCTTCATCAGCCACTTCAAATAGGAATCAAACCAGCCGGTCGAGAGTATCTTCAAGTCCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CCA 90 bp ACTGCGTGGGCTGCACTGTCCTCAAAACTTCTGATGGTTGTGCAACTTCCACAGATACTCTCGACCGGCTaGTTTGATTCCTATTTGAAG +
Preference number: 2 (lower is better)
Translates to: TAWAALSSKLLMVVQLPQILSTG*FDSYLK
Trigger: CTTCAAATAGGAATCAAACCAGCCGGTCGAGAGTAT...CTGTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACAGTGCAGCCCACGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACGATATGGAGACTGCGTaGGCTGCACTGTCCTCAAAA +
Preference number: 2 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNDMETA*AALSSK
Trigger: TTTTGAGGACAGTGCAGCCCACGCAGTCTCCATATC...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR TCA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACCAGGGGAATCCATATTaGGGAGTGCCTCAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHQGNPY*GVPQQP
Trigger: AGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTG...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR GCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACTCAGGTTTGTTTTTGTaGTTCCCCCACAACCTGGAC +
Preference number: 2 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNSGLFL*FPHNLD
Trigger: GTCCAGGTTGTGGGGGAAGCACAAAAACAAACCTGA...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACAGTGGCTGGGGAATCTaGTCGTGGTGGTTTAGTTTT +
Preference number: 2 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNSGWGI*SWWFSF
Trigger: AAAACTAAACCACCACGACCAGATTCCCCAGCCACT...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CCA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACATTTGGCGTAGTGGCTaGGGAATCTGGTCGTGGTGG +
Preference number: 2 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHIWRSG*GIWSWW
Trigger: CCACCACGACCAGATTCCCCAGCCACTACGCCAAAT...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR TCA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGATACTATCCTGCTTCTaGAACAGGGTCAGCCATACC +
Preference number: 2 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMILSCF*NRVSHT
Trigger: GGTATGGCTGACCCTGTTTCAGAAGCAGGATAGTAT...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR TCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACTGTCCTCAAAACTTCTaGTGGTTGTGCAACTTCCAC +
Preference number: 2 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNCPQNF*WLCNFH
Trigger: GTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACA...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACCTTCACAGATATATTTaGCGTAGTGGCTGGGGAATC +
Preference number: 2 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNLHRYI*RSGWGI
Trigger: GATTCCCCAGCCACTACGCCAAATATATCTGTGAAG...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CAA 90 bp TACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACTaGGGTTGGAGCCTGTATAGTCCTAATACTCTGAACGGAAGAATT +
Preference number: 2 (lower is better)
Translates to: YCMQLLIPRRHNHWN*GWSLYSPNTLNGRI
Trigger: AATTCTTCCGTTCAGAGTATTAGGACTATACAGGCTCCAACCCAAGTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR TCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACGTGCCATTCTTAGGCTaGTGCTTTTATACTATCCTG +
Preference number: 2 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNVPFLG*CFYTIL
Trigger: CAGGATAGTATAAAAGCATCAGCCTAAGAATGGCAC...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR TCA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACTTTTACCCCTGGACTTaGAGATACTCTCGACCGGCT +
Preference number: 2 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHFYPWT*RYSRPA
Trigger: AGCCGGTCGAGAGTATCTTCAAGTCCAGGGGTAAAA...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR GCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACGATCTGAAGACTCTATaGTGGAACTTGGATCCTCAT +
Preference number: 2 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNDLKTL*WNLDPH
Trigger: ATGAGGATCCAAGTTCCAGCATAGAGTCTTCAGATC...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CCA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGCACTGGAACTTGGGTTaGAGCCTGTATAGTCCTAAT +
Preference number: 2 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMHWNLG*SLYSPN
Trigger: ATTAGGACTATACAGGCTCCAACCCAAGTTCCAGTG...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CCA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACACAACCACTGGAACTTaGGTTGGAGCCTGTATAGTC +
Preference number: 2 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHTTTGT*VGACIV
Trigger: GACTATACAGGCTCCAACCCAAGTTCCAGTGGTTGT...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CAA 90 bp TTATTTATTCGTTTTTCATCCAGCATAGGGCCAGGGGAATCCATATaGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCATCC +
Preference number: 2 (lower is better)
Translates to: LFIRFSSSIGPGESI*RSASAASIVSIVSS
Trigger: GGATGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTGGATGAAAAACGAATAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CCA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGGGAATCTGGTCGTGGTaGTTTAGTTTTTCTTCCTTT +
Preference number: 2 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMGIWSW*FSFSSF
Trigger: AAAGGAAGAAAAACTAAACCACCACGACCAGATTCC...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CCA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACCTTTCAGTACTGTCATaGGCTGTGATGATGGAATGG +
Preference number: 2 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHLSVLS*AVMMEW
Trigger: CCATTCCATCATCACAGCCCATGACAGTACTGAAAG...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR TCA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGTGTAAAATAAACTTCTaGGATCCAGTACCTGCTGAT +
Preference number: 2 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMCKINF*DPVPAD
Trigger: ATCAGCAGGTACTGGATCTCAGAAGTTTATTTTACA...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACCTCTATGCTGGAACTTaGATCCTCATCATTTATATA +
Preference number: 2 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNLYAGT*ILIIYI
Trigger: TATATAAATGATGAGGATCCAAGTTCCAGCATAGAG...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTATACTATCCTGCTTCTaGAACAGGGTCAGCCATACC +
Preference number: 2 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFILSCF*NRVSHT
Trigger: GGTATGGCTGACCCTGTTTCAGAAGCAGGATAGTAT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
3UTR-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCAAGTAGCCTTGTCCTaGAGCAGTGCCAGTAAAAAC +
Preference number: 2 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFQVALS*SSASKN
Trigger: GTTTTTACTGGCACTGCTCCAGGACAAGGCTACTTG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR GCA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACTTTAATGTTTCATCCTaGATGGTACTGGTTCTAGCT +
Preference number: 2 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHFNVSS*MVLVLA
Trigger: AGCTAGAACCAGTACCATGCAGGATGAAACATTAAA...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGTGCCATTCTTAGGCTaGTGCTTTTATACTATCCTG +
Preference number: 2 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFVPFLG*CFYTIL
Trigger: CAGGATAGTATAAAAGCATCAGCCTAAGAATGGCAC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
3UTR-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCTGAAGACTCTATGCTaGAACTTGGATCCTCATCAT +
Preference number: 2 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLKTLC*NLDPHH
Trigger: ATGATGAGGATCCAAGTTCCAGCATAGAGTCTTCAG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTACAAAGAGAAACAGTTaGGTTTTCCTCCCTCATCTA +
Preference number: 2 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFTKRNS*VFLPHL
Trigger: TAGATGAGGGAGGAAAACTCAACTGTTTCTCTTTGT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
3UTR CCA 72 bp GGTTCTAGCTGCTTCTCCCTCTGGGACAGCCTGTACTaGCTGTACTACATGAACAGTCCGGAAGAGCTGGGT +
Preference number: 3 (lower is better)
Translates to: GSSCFSLWDSLY*LYYMNSPEELG
Trigger: ACCCAGCTCTTCCGGACTGTTCATGTAGTACAGCCAGTACAGGCTGTCCCAGAGGGAGAAGCAGCTAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR TCA 72 bp TCTCCCTCTGGGACAGCCTGTACTGGCTGTACTACATaGACAGTCCGGAAGAGCTGGGTAGGATATGGAGAC +
Preference number: 3 (lower is better)
Translates to: SPSGTACTGCTT*TVRKSWVGYGD
Trigger: GTCTCCATATCCTACCCAGCTCTTCCGGACTGTTCATGTAGTACAGCCAGTACAGGCTGTCCCAGAGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR TCA 72 bp AGTGATTACAGTGCCAGGTGGGTGAGCAACCAGCTGTaGACTGCGAGGAGAAAAGGTCACCACAGGTGCAGT +
Preference number: 3 (lower is better)
Translates to: SDYSARWVSNQL*TARRKGHHRCS
Trigger: ACTGCACCTGTGGTGACCTTTTCTCCTCGCAGTTCACAGCTGGTTGCTCACCCACCTGGCACTGTAATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR GCA 72 bp CGGAAGAGCTGGGTAGGATATGGAGACTGCGTGGGCTaGACTGTCCTCAAAACTTCTGATGGTTGTGCAACT +
Preference number: 3 (lower is better)
Translates to: RKSWVGYGDCVG*TVLKTSDGCAT
Trigger: AGTTGCACAACCATCAGAAGTTTTGAGGACAGTGCAGCCCACGCAGTCTCCATATCCTACCCAGCTCTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CCA 72 bp ATCCTGCATGGTACTGGTTCTAGCTGCTTCTCCCTCTaGGACAGCCTGTACTGGCTGTACTACATGAACAGT +
Preference number: 3 (lower is better)
Translates to: ILHGTGSSCFSL*DSLYWLYYMNS
Trigger: ACTGTTCATGTAGTACAGCCAGTACAGGCTGTCCCAGAGGGAGAAGCAGCTAGAACCAGTACCATGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR TCA 72 bp TGGAGACTGCGTGGGCTGCACTGTCCTCAAAACTTCTaGTGGTTGTGCAACTTCCACAGGATCTTTGGGTTT +
Preference number: 3 (lower is better)
Translates to: WRLRGLHCPQNF*WLCNFHRIFGF
Trigger: AAACCCAAAGATCCTGTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACAGTGCAGCCCACGCAGTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CAA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACCTTTTACCCCTGGACTaGAAGATACTCTCGACCGGC +
Preference number: 3 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNLLPLD*KILSTG
Trigger: GCCGGTCGAGAGTATCTTCAAGTCCAGGGGTAAAAG...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR TCA 72 bp GTTTTGATAACTGAAGTGATTACAGTGCCAGGTGGGTaGGCAACCAGCTGTGAACTGCGAGGAGAAAAGGTC +
Preference number: 3 (lower is better)
Translates to: VLITEVITVPGG*ATSCELRGEKV
Trigger: GACCTTTTCTCCTCGCAGTTCACAGCTGGTTGCTCACCCACCTGGCACTGTAATCACTTCAGTTATCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CAA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGCACAACCACTGGAACTaGGGTTGGAGCCTGTATAGT +
Preference number: 3 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMHNHWN*GWSLYS
Trigger: ACTATACAGGCTCCAACCCAAGTTCCAGTGGTTGTG...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR TCA 72 bp ACCCCTGGACTTGAAGATACTCTCGACCGGCTGGTTTaGTTCCTATTTGAAGTGGCTGATGAAGATAGCGAT +
Preference number: 3 (lower is better)
Translates to: TPGLEDTLDRLV*FLFEVADEDSD
Trigger: ATCGCTATCTTCATCAGCCACTTCAAATAGGAATCAAACCAGCCGGTCGAGAGTATCTTCAAGTCCAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR GCA 72 bp ATCCAGCATAGGGCCAGGGGAATCCATATTGAGGAGTaGCTCAGCAGCCTCAATAGTTTCAATTGTTTCATC +
Preference number: 3 (lower is better)
Translates to: IQHRARGIHIEE*LSSLNSFNCFI
Trigger: GATGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR GCA 72 bp GAGGCTCCCGGTGAGTCTGCATATTTTTCTTGCACCTaGTGTGTTTCCATCACTTCAGGAATCCCATCTAAT +
Preference number: 3 (lower is better)
Translates to: EAPGESAYFSCT*CVSITSGIPSN
Trigger: ATTAGATGGGATTCCTGAAGTGATGGAAACACAGCAGGTGCAAGAAAAATATGCAGACTCACCGGGAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CCA 72 bp CTGATTCCTAGGAGACACAACCACTGGAACTTGGGTTaGAGCCTGTATAGTCCTAATACTCTGAACGGAAGA +
Preference number: 3 (lower is better)
Translates to: LIPRRHNHWNLG*SLYSPNTLNGR
Trigger: TCTTCCGTTCAGAGTATTAGGACTATACAGGCTCCAACCCAAGTTCCAGTGGTTGTGTCTCCTAGGAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CCA 72 bp TCCATTGGAACTGGACACTACCATCACATAAGGCTGTaGCTGCTGCTCCGTTTTCTCAGTGTTCTCTTTCAA +
Preference number: 3 (lower is better)
Translates to: SIGTGHYHHIRL*LLLRFLSVLFQ
Trigger: TTGAAAGAGAACACTGAGAAAACGGAGCAGCAGCCACAGCCTTATGTGATGGTAGTGTCCAGTTCCAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR TCA 72 bp GGCTGTGATGATGGAATGGCTTGTAAAATAAACTTCTaGGATCCAGTACCTGCTGATGGATCTGTGCTGGCT +
Preference number: 3 (lower is better)
Translates to: GCDDGMACKINF*DPVPADGSVLA
Trigger: AGCCAGCACAGATCCATCAGCAGGTACTGGATCTCAGAAGTTTATTTTACAAGCCATTCCATCATCACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CCA 72 bp TGTATGCAACTGCTGATTCCTAGGAGACACAACCACTaGAACTTGGGTTGGAGCCTGTATAGTCCTAATACT +
Preference number: 3 (lower is better)
Translates to: CMQLLIPRRHNH*NLGWSLYSPNT
Trigger: AGTATTAGGACTATACAGGCTCCAACCCAAGTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CCA 72 bp ATACTCTCGACCGGCTGGTTTGATTCCTATTTGAAGTaGCTGATGAAGATAGCGATGGATCTGAAGACTCTA +
Preference number: 3 (lower is better)
Translates to: ILSTGWFDSYLK*LMKIAMDLKTL
Trigger: TAGAGTCTTCAGATCCATCGCTATCTTCATCAGCCACTTCAAATAGGAATCAAACCAGCCGGTCGAGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CCA 72 bp CTTTTACCCCTGGACTTGAAGATACTCTCGACCGGCTaGTTTGATTCCTATTTGAAGTGGCTGATGAAGATA +
Preference number: 3 (lower is better)
Translates to: LLPLDLKILSTG*FDSYLKWLMKI
Trigger: TATCTTCATCAGCCACTTCAAATAGGAATCAAACCAGCCGGTCGAGAGTATCTTCAAGTCCAGGGGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CAA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACTGCCAGAATACCCCTTaGGTAATAGTACCTGAGTGC +
Preference number: 3 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHCQNTP*VIVPEC
Trigger: GCACTCAGGTACTATTACCAAAGGGGTATTCTGGCA...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CAA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGACTTCCACAGGATCTTaGGGTTTTGCAGCTTTAGAA +
Preference number: 3 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMTSTGS*GFAALE
Trigger: TTCTAAAGCTGCAAAACCCAAAGATCCTGTGGAAGT...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CCA 72 bp GTTTTTCTTCTTCACAGATATATTTGGCGTAGTGGCTaGGGAATCTGGTCGTGGTGGTTTAGTTTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: VFLLHRYIWRSG*GIWSWWFSFSS
Trigger: GGAAGAAAAACTAAACCACCACGACCAGATTCCCCAGCCACTACGCCAAATATATCTGTGAAGAAGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR-3UTR CAA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACACTCCCAAAGATAAATaGTGTTTCCCTTTCCATCTT +
Preference number: 3 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHTPKDK*CFPFHL
Trigger: AAGATGGAAAGGGAAACACAATTTATCTTTGGGAGT...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp CAGCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTACAGTGCCAGGTGGGTaGGCAACCAGCTGTGAACTG +
Preference number: 4 (lower is better)
Translates to: QHRARGIHIEECLSSLNSTVPGG*ATSCEL
Trigger: CAGTTCACAGCTGGTTGCTCACCCACCTGGCACTGT...ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp CAGCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTACTGGCTGTACTACATaGACAGTCCGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QHRARGIHIEECLSSLNSTGCTT*TVRKSW
Trigger: CCAGCTCTTCCGGACTGTTCATGTAGTACAGCCAGT...ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp CAGCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTACAGTCCGGAAGAGCTaGGTAGGATATGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: QHRARGIHIEECLSSLNSTVRKS*VGYGDC
Trigger: GCAGTCTCCATATCCTACCCAGCTCTTCCGGACTGT...ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp CAGCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAACAAACCTGGCTaGCGCAGTGGCTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: QHRARGIHIEECLSSLNSFNKPG*RSGSFL
Trigger: CAGGAATGAGCCACTGCGCCAGCCAGGTTTGTTGAA...ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACCTAGTAAGGACCTGCTaGACCTGGGCAGGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNLVRTC*TWAGPK
Trigger: CTTGGGCCCTGCCCAGGTTCAGCAGGTCCTTACTAG...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp ACTGCGTGGGCTGCACTGTCCTCAAAACTTCTGATGGTTGTGCAACTTCCACAGCTCGACCGGCTGGTTTaGTTCCTATTTGAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: TAWAALSSKLLMVVQLPQLDRLV*FLFEVA
Trigger: AGCCACTTCAAATAGGAATCAAACCAGCCGGTCGAG...CTGTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACAGTGCAGCCCACGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACAGGGCCCAAGACAATTaGAGGAGGAGAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNRAQDN*RRRARL
Trigger: AAGGCGGGCTCTCCTCCTTCAATTGTCTTGGGCCCT...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp CAGCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTGGCAGGAAAAATAGCTaGATCACCAAGCTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: QHRARGIHIEECLSSLNSGRKNS*ITKLSF
Trigger: GAACGACAGCTTGGTGATCCAGCTATTTTTCCTGCC...ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp CAGCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTACAACCACTGGAACTTaGGTTGGAGCCTGTATAGTC +
Preference number: 4 (lower is better)
Translates to: QHRARGIHIEECLSSLNSTTTGT*VGACIV
Trigger: GACTATACAGGCTCCAACCCAAGTTCCAGTGGTTGT...ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp CAGCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTGACCGGCATAACTATTaGGAATATCAGCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: QHRARGIHIEECLSSLNSDRHNY*EYQHQE
Trigger: TTCCTGGTGCTGATATTCTCAATAGTTATGCCGGTC...ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp ACTGCGTGGGCTGCACTGTCCTCAAAACTTCTGATGGTTGTGCAACTTCCACAGCCATTGCAAATGGTCTaGACATTGCTAGTAAGGACC +
Preference number: 4 (lower is better)
Translates to: TAWAALSSKLLMVVQLPQPLQMV*TLLVRT
Trigger: GGTCCTTACTAGCAATGTTCAGACCATTTGCAATGG...CTGTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACAGTGCAGCCCACGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACGAGAGGAAGCCACACTaGCGGTTCCATTGCAAATGG +
Preference number: 4 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNERKPH*RFHCKW
Trigger: CCATTTGCAATGGAACCGTCAGTGTGGCTTCCTCTC...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACGGCAAGCAGATTGCTTaGGGTCAGGAGTCTGAGACT +
Preference number: 4 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNGKQIA*GQESET
Trigger: AGTCTCAGACTCCTGACCTCAAGCAATCTGCTTGCC...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR GCA 90 bp ACTGCGTGGGCTGCACTGTCCTCAAAACTTCTGATGGTTGTGCAACTTCCACAGATCCATATTGAGGAGTaGCTCAGCAGCCTCAATAGT +
Preference number: 4 (lower is better)
Translates to: TAWAALSSKLLMVVQLPQIHIEE*LSSLNS
Trigger: ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGAT...CTGTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACAGTGCAGCCCACGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp ACTGCGTGGGCTGCACTGTCCTCAAAACTTCTGATGGTTGTGCAACTTCCACAGCCTCAGCTCTGTCTGTaGAGTAATTGTATACCCAAG +
Preference number: 4 (lower is better)
Translates to: TAWAALSSKLLMVVQLPQPQLCL*SNCIPK
Trigger: CTTGGGTATACAATTACTCCACAGACAGAGCTGAGG...CTGTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACAGTGCAGCCCACGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp ACTGCGTGGGCTGCACTGTCCTCAAAACTTCTGATGGTTGTGCAACTTCCACAGCACTGGAACTTGGGTTaGAGCCTGTATAGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: TAWAALSSKLLMVVQLPQHWNLG*SLYSPN
Trigger: ATTAGGACTATACAGGCTCCAACCCAAGTTCCAGTG...CTGTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACAGTGCAGCCCACGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACTTTTACCCCTGGACTTaGAGATACTCTCGACCGGCT +
Preference number: 4 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNFYPWT*RYSRPA
Trigger: AGCCGGTCGAGAGTATCTTCAAGTCCAGGGGTAAAA...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACAGAGCCCGCCTTTTGTaGCTGCAGCATGACATTTTC +
Preference number: 4 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNRARLL*LQHDIF
Trigger: GAAAATGTCATGCTGCAGTCACAAAAGGCGGGCTCT...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGGTGAGCAACCAGCTGTaGACTGCGAGGAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMVSNQL*TARRKG
Trigger: ACCTTTTCTCCTCGCAGTTCACAGCTGGTTGCTCAC...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp CAGCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTGAGTTTTGATAACTaGAGTGATTACAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QHRARGIHIEECLSSLNSLSFDN*SDYSAR
Trigger: CCTGGCACTGTAATCACTTCAGTTATCAAAACTCAA...ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCATTGAGGTCAGGAGTCTaGGACTGGCCAACATGGAGA +
Preference number: 4 (lower is better)
Translates to: GESILRSASAASIVSIVSLRSGV*DWPTWR
Trigger: TCTCCATGTTGGCCAGTCTCAGACTCCTGACCTCAA...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR GCA 90 bp CAGCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTCTGCATATTTTTCTTaGACCTGCTGTGTTTCCATC +
Preference number: 4 (lower is better)
Translates to: QHRARGIHIEECLSSLNSSAYFS*TCCVSI
Trigger: GATGGAAACACAGCAGGTGCAAGAAAAATATGCAGA...ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCAGGACACATGGGTGACTaGGGCAACAACCATGTCATC +
Preference number: 4 (lower is better)
Translates to: GESILRSASAASIVSIVSGHMGD*GNNHVI
Trigger: GATGACATGGTTGTTGCCCCAGTCACCCATGTGTCC...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGAATGTGACGGACACATaGGTGACTGGGGCAACAACC +
Preference number: 4 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMNVTDT*VTGATT
Trigger: GGTTGTTGCCCCAGTCACCCATGTGTCCGTCACATT...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp ACTGCGTGGGCTGCACTGTCCTCAAAACTTCTGATGGTTGTGCAACTTCCACAGCTGAAGACTCTATGCTaGAACTTGGATCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: TAWAALSSKLLMVVQLPQLKTLC*NLDPHH
Trigger: ATGATGAGGATCCAAGTTCCAGCATAGAGTCTTCAG...CTGTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACAGTGCAGCCCACGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACAGCTGCTTCTCCCTCTaGGACAGCCTGTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHSCFSL*DSLYWL
Trigger: CAGCCAGTACAGGCTGTCCCAGAGGGAGAAGCAGCT...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCAAGGAGACACAACCACTaGAACTTGGGTTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GESILRSASAASIVSIVSRRHNH*NLGWSL
Trigger: CAGGCTCCAACCCAAGTTCCAGTGGTTGTGTCTCCT...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp CAGCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTATAACTGTTGTGAGTaGCACTGTTTGGAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: QHRARGIHIEECLSSLNSYNCCE*HCLECY
Trigger: GTAACACTCCAAACAGTGCCACTCACAACAGTTATA...ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp ACTGCGTGGGCTGCACTGTCCTCAAAACTTCTGATGGTTGTGCAACTTCCACAGCCCCTTAGATCCACATaGGAAAAATTCCAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: TAWAALSSKLLMVVQLPQPLRST*EKFQED
Trigger: ATCTTCTTGGAATTTTTCTCATGTGGATCTAAGGGG...CTGTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACAGTGCAGCCCACGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGAGATCCAGTACCTGCTaGTGGATCTGTGCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMRSSTC*WICAGY
Trigger: ATAGCCAGCACAGATCCATCAGCAGGTACTGGATCT...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp CAGCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTGTAAAATAAACTTCTaGGATCCAGTACCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: QHRARGIHIEECLSSLNSCKINF*DPVPAD
Trigger: ATCAGCAGGTACTGGATCTCAGAAGTTTATTTTACA...ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp ACTGCGTGGGCTGCACTGTCCTCAAAACTTCTGATGGTTGTGCAACTTCCACAGACAAAGAGAAACAGTTaGGTTTTCCTCCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: TAWAALSSKLLMVVQLPQTKRNS*VFLPHL
Trigger: TAGATGAGGGAGGAAAACTCAACTGTTTCTCTTTGT...CTGTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACAGTGCAGCCCACGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp CAGCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTATGCTTTTATAACTaGCTACTCAGCCAGATTAGC +
Preference number: 4 (lower is better)
Translates to: QHRARGIHIEECLSSLNSLCFYN*LLSQIS
Trigger: GCTAATCTGGCTGAGTAGTCAGTTATAAAAGCATAA...ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR GCA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCAAAAGGTCACCACAGGTaGAGTAGCACTGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: GESILRSASAASIVSIVSKGHHR*SSTEGW
Trigger: CCATCCTTCAGTGCTACTGCACCTGTGGTGACCTTT...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCACATCACATAAGGCTGTaGCTGCTGCTCCGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GESILRSASAASIVSIVSHHIRL*LLLRFL
Trigger: GAGAAAACGGAGCAGCAGCCACAGCCTTATGTGATG...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CAA 72 bp CGTTTTTCATCCAGCATAGGGCCAGGGGAATCCATATaGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: RFSSSIGPGESI*RSASAASIVSI
Trigger: AATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTGGATGAAAAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CAA 72 bp CAACTGCTGATTCCTAGGAGACACAACCACTGGAACTaGGGTTGGAGCCTGTATAGTCCTAATACTCTGAAC +
Preference number: 4 (lower is better)
Translates to: QLLIPRRHNHWN*GWSLYSPNTLN
Trigger: GTTCAGAGTATTAGGACTATACAGGCTCCAACCCAAGTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCTAGTAAGGACCTGCTaGACCTGGGCAGGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLVRTC*TWAGPK
Trigger: CTTGGGCCCTGCCCAGGTTCAGCAGGTCCTTACTAG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp ACTGCGTGGGCTGCACTGTCCTCAAAACTTCTGATGGTTGTGCAACTTCCACAGCTTAAGAAAGAGTCTTaGCTCTCTCAAAATAGCAGT +
Preference number: 4 (lower is better)
Translates to: TAWAALSSKLLMVVQLPQLKKES*LSQNSS
Trigger: ACTGCTATTTTGAGAGAGTCAAGACTCTTTCTTAAG...CTGTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACAGTGCAGCCCACGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCATGGGACAGCCTGTACTaGCTGTACTACATGAACAGT +
Preference number: 4 (lower is better)
Translates to: GESILRSASAASIVSIVSWDSLY*LYYMNS
Trigger: ACTGTTCATGTAGTACAGCCAGTACAGGCTGTCCCA...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CAA 72 bp ATCTGTGCTGGCTATAACTGTTGTGAGTGGCACTGTTaGGAGTGTTACTGTATGCAACTGCTGATTCCTAGG +
Preference number: 4 (lower is better)
Translates to: ICAGYNCCEWHC*ECYCMQLLIPR
Trigger: CCTAGGAATCAGCAGTTGCATACAGTAACACTCCAAACAGTGCCACTCACAACAGTTATAGCCAGCACAGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCATGTCCTCAAAACTTCTaGTGGTTGTGCAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: GESILRSASAASIVSIVSCPQNF*WLCNFH
Trigger: GTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACA...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTAGGGCCCAAGACAATTaGAGGAGGAGAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFRAQDN*RRRARL
Trigger: AAGGCGGGCTCTCCTCCTTCAATTGTCTTGGGCCCT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTACAGTGCCAGGTGGGTaGGCAACCAGCTGTGAACTG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFTVPGG*ATSCEL
Trigger: CAGTTCACAGCTGGTTGCTCACCCACCTGGCACTGT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGGTTTCATCCCCGTCATaGCAAGAAGCTTCAACAAAC +
Preference number: 4 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMVSSPS*QEASTN
Trigger: GTTTGTTGAAGCTTCTTGTCATGACGGGGATGAAAC...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR GCA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCACTGACCTTCCACTTTTaGCAGAATACCCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: GESILRSASAASIVSIVSLTFHF*QNTPLV
Trigger: TACCAAAGGGGTATTCTGGCAAAAGTGGAAGGTCAG...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR GCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACAGGATCTTTGGGTTTTaGAGCTTTAGAATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNRIFGF*SFRIPW
Trigger: CCAGGGAATTCTAAAGCTGCAAAACCCAAAGATCCT...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCACTTCACAGATATATTTaGCGTAGTGGCTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: GESILRSASAASIVSIVSLHRYI*RSGWGI
Trigger: GATTCCCCAGCCACTACGCCAAATATATCTGTGAAG...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACGATATGGAGACTGCGTaGGCTGCACTGTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHDMETA*AALSSK
Trigger: TTTTGAGGACAGTGCAGCCCACGCAGTCTCCATATC...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTAGCTGCTTCTCCCTCTaGGACAGCCTGTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFSCFSL*DSLYWL
Trigger: CAGCCAGTACAGGCTGTCCCAGAGGGAGAAGCAGCT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGCTTTCAGTACTGTCATaGGCTGTGATGATGGAATGG +
Preference number: 4 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMLSVLS*AVMMEW
Trigger: CCATTCCATCATCACAGCCCATGACAGTACTGAAAG...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGGACCGCAAAGCACAGTaGCCTAAAGAGTTAGTAAAC +
Preference number: 4 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMDRKAQ*PKELVN
Trigger: GTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTC...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
3UTR CAA 72 bp TTGAAGATACTCTCGACCGGCTGGTTTGATTCCTATTaGAAGTGGCTGATGAAGATAGCGATGGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: LKILSTGWFDSY*KWLMKIAMDLK
Trigger: CTTCAGATCCATCGCTATCTTCATCAGCCACTTCAAATAGGAATCAAACCAGCCGGTCGAGAGTATCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCAGGGGAATCCATATTaGGGAGTGCCTCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFQGNPY*GVPQQP
Trigger: AGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR GCA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCAGATCTGAAGACTCTATaGTGGAACTTGGATCCTCAT +
Preference number: 4 (lower is better)
Translates to: GESILRSASAASIVSIVSDLKTL*WNLDPH
Trigger: ATGAGGATCCAAGTTCCAGCATAGAGTCTTCAGATC...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACGGAATCTGGTCGTGGTaGTTTAGTTTTTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNGIWSW*FSFSSF
Trigger: AAAGGAAGAAAAACTAAACCACCACGACCAGATTCC...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACAGTGGCTGGGGAATCTaGTCGTGGTGGTTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHSGWGI*SWWFSF
Trigger: AAAACTAAACCACCACGACCAGATTCCCCAGCCACT...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTATTTGGCGTAGTGGCTaGGGAATCTGGTCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFIWRSG*GIWSWW
Trigger: CCACCACGACCAGATTCCCCAGCCACTACGCCAAAT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACCATCATCATCGTCTATaGTTTCTTCTTCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNHHHRL*FLLQQH
Trigger: ATGTTGCTGAAGAAGAAATCATAGACGATGATGATG...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTACTGGCTGTACTACATaGACAGTCCGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFTGCTT*TVRKSW
Trigger: CCAGCTCTTCCGGACTGTTCATGTAGTACAGCCAGT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGAGAGGAAGCCACACTaGCGGTTCCATTGCAAATGG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFERKPH*RFHCKW
Trigger: CCATTTGCAATGGAACCGTCAGTGTGGCTTCCTCTC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGTGAGCAACCAGCTGTaGACTGCGAGGAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFVSNQL*TARRKG
Trigger: ACCTTTTCTCCTCGCAGTTCACAGCTGGTTGCTCAC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGGAGACTGCGTGGGCTaGACTGTCCTCAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFGDCVG*TVLKTS
Trigger: AGAAGTTTTGAGGACAGTGCAGCCCACGCAGTCTCC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGGACACATGGGTGACTaGGGCAACAACCATGTCATC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFGHMGD*GNNHVI
Trigger: GATGACATGGTTGTTGCCCCAGTCACCCATGTGTCC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTAATGTGACGGACACATaGGTGACTGGGGCAACAACC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFNVTDT*VTGATT
Trigger: GGTTGTTGCCCCAGTCACCCATGTGTCCGTCACATT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTACAGTCCGGAAGAGCTaGGTAGGATATGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFTVRKS*VGYGDC
Trigger: GCAGTCTCCATATCCTACCCAGCTCTTCCGGACTGT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTAGGAGACACAACCACTaGAACTTGGGTTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFRRHNH*NLGWSL
Trigger: CAGGCTCCAACCCAAGTTCCAGTGGTTGTGTCTCCT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACGTGAGTGGCACTGTTTaGAGTGTTACTGTATGCAAC +
Preference number: 4 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHVSGTV*SVTVCN
Trigger: GTTGCATACAGTAACACTCCAAACAGTGCCACTCAC...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCTCGACCGGCTGGTTTaGTTCCTATTTGAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLDRLV*FLFEVA
Trigger: AGCCACTTCAAATAGGAATCAAACCAGCCGGTCGAG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTTTTACCCCTGGACTTaGAGATACTCTCGACCGGCT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFFYPWT*RYSRPA
Trigger: AGCCGGTCGAGAGTATCTTCAAGTCCAGGGGTAAAA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTAGATCCAGTACCTGCTaGTGGATCTGTGCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFRSSTC*WICAGY
Trigger: ATAGCCAGCACAGATCCATCAGCAGGTACTGGATCT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTAGAGCCCGCCTTTTGTaGCTGCAGCATGACATTTTC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFRARLL*LQHDIF
Trigger: GAAAATGTCATGCTGCAGTCACAAAAGGCGGGCTCT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTAAAGGTCACCACAGGTaGAGTAGCACTGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFKGHHR*SSTEGW
Trigger: CCATCCTTCAGTGCTACTGCACCTGTGGTGACCTTT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCAACCAGCTGTGAACTaGGAGGAGAAAAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFQPAVN*EEKRSP
Trigger: TGGTGACCTTTTCTCCTCGCAGTTCACAGCTGGTTG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACACTAGGTCGTTCTGTTaGACAACAGCAGCCATAATA +
Preference number: 4 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHTRSFC*TTAAII
Trigger: TATTATGGCTGCTGTTGTCCAACAGAACGACCTAGT...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGATATGGAGACTGCGTaGGCTGCACTGTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFDMETA*AALSSK
Trigger: TTTTGAGGACAGTGCAGCCCACGCAGTCTCCATATC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCATCACATAAGGCTGTaGCTGCTGCTCCGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFHHIRL*LLLRFL
Trigger: GAGAAAACGGAGCAGCAGCCACAGCCTTATGTGATG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp CAGTTCGTTTTGTTTCATAGCTACCTGAGAAGTAAATCCATTGGAACTGGACACTTTGTGACTGCAGCATaGCATTTTCTTTCAGTACTG +
Preference number: 4 (lower is better)
Translates to: QFVLFHSYLRSKSIGTGHFVTAA*HFLSVL
Trigger: CAGTACTGAAAGAAAATGTCATGCTGCAGTCACAAA...GTGTCCAGTTCCAATGGATTTACTTCTCAGGTAGCTATGAAACAAAACGAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTCAGGTTTGTTTTTGTaGTTCCCCCACAACCTGGAC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFSGLFL*FPHNLD
Trigger: GTCCAGGTTGTGGGGGAAGCACAAAAACAAACCTGA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGGCAGGAAAAATAGCTaGATCACCAAGCTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFGRKNS*ITKLSF
Trigger: GAACGACAGCTTGGTGATCCAGCTATTTTTCCTGCC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTAGTGGCTGGGGAATCTaGTCGTGGTGGTTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFSGWGI*SWWFSF
Trigger: AAAACTAAACCACCACGACCAGATTCCCCAGCCACT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTGGGACAGCCTGTACTaGCTGTACTACATGAACAGT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFWDSLY*LYYMNS
Trigger: ACTGTTCATGTAGTACAGCCAGTACAGGCTGTCCCA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTACAACCACTGGAACTTaGGTTGGAGCCTGTATAGTC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFTTTGT*VGACIV
Trigger: GACTATACAGGCTCCAACCCAAGTTCCAGTGGTTGT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGACCGGCATAACTATTaGGAATATCAGCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFDRHNY*EYQHQE
Trigger: TTCCTGGTGCTGATATTCTCAATAGTTATGCCGGTC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGTTTCATCCCCGTCATaGCAAGAAGCTTCAACTGTA +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFVSSPS*QEASTV
Trigger: TACAGTTGAAGCTTCTTGTCATGACGGGGATGAAAC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239882.7
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTGTCCTCAAAACTTCTaGTGGTTGTGCAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFCPQNF*WLCNFH
Trigger: GTGGAAGTTGCACAACCATCAGAAGTTTTGAGGACA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCCATTGCAAATGGTCTaGACATTGCTAGTAAGGACC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFPLQMV*TLLVRT
Trigger: GGTCCTTACTAGCAATGTTCAGACCATTTGCAATGG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTATCCATATTGAGGAGTaGCTCAGCAGCCTCAATAGT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFIHIEE*LSSLNS
Trigger: ACTATTGAGGCTGCTGAGGCACTCCTCAATATGGAT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCTGACCTTCCACTTTTaGCAGAATACCCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLTFHF*QNTPLV
Trigger: TACCAAAGGGGTATTCTGGCAAAAGTGGAAGGTCAG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCCTCAGCTCTGTCTGTaGAGTAATTGTATACCCAAG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFPQLCL*SNCIPK
Trigger: CTTGGGTATACAATTACTCCACAGACAGAGCTGAGG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCTTCACAGATATATTTaGCGTAGTGGCTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLHRYI*RSGWGI
Trigger: GATTCCCCAGCCACTACGCCAAATATATCTGTGAAG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCACTGGAACTTGGGTTaGAGCCTGTATAGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFHWNLG*SLYSPN
Trigger: ATTAGGACTATACAGGCTCCAACCCAAGTTCCAGTG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGTGAGTGGCACTGTTTaGAGTGTTACTGTATGCAAC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFVSGTV*SVTVCN
Trigger: GTTGCATACAGTAACACTCCAAACAGTGCCACTCAC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCTTTCAGTACTGTCATaGGCTGTGATGATGGAATGG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLSVLS*AVMMEW
Trigger: CCATTCCATCATCACAGCCCATGACAGTACTGAAAG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGACCGCAAAGCACAGTaGCCTAAAGAGTTAGTAAAC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFDRKAQ*PKELVN
Trigger: GTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTTCAGCAACATCCAGTaGACTCTCAGTAATCATGTC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFFSNIQ*TLSNHV
Trigger: GACATGATTACTGAGAGTTCACTGGATGTTGCTGAA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCCACAACCTGGACACTaGTTTAGAATCCACCAATTT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFPQPGH*FRIHQF
Trigger: AAATTGGTGGATTCTAAAGCAGTGTCCAGGTTGTGG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGTAATAGTACCTGAGTaGTCTTCCCATGGTCTCATA +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFVIVPE*SSHGLI
Trigger: TATGAGACCATGGGAAGAGCACTCAGGTACTATTAC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGATCTGAAGACTCTATaGTGGAACTTGGATCCTCAT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFDLKTL*WNLDPH
Trigger: ATGAGGATCCAAGTTCCAGCATAGAGTCTTCAGATC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTAGGATCTTTGGGTTTTaGAGCTTTAGAATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFRIFGF*SFRIPW
Trigger: CCAGGGAATTCTAAAGCTGCAAAACCCAAAGATCCT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTACTAGGTCGTTCTGTTaGACAACAGCAGCCATAATA +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFTRSFC*TTAAII
Trigger: TATTATGGCTGCTGTTGTCCAACAGAACGACCTAGT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTATACTCTCGACCGGCTaGTTTGATTCCTATTTGAAG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFILSTG*FDSYLK
Trigger: CTTCAAATAGGAATCAAACCAGCCGGTCGAGAGTAT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCCCCTTAGATCCACATaGGAAAAATTCCAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFPLRST*EKFQED
Trigger: ATCTTCTTGGAATTTTTCTCATGTGGATCTAAGGGG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTTTGTGACTGCAGCATaGCATTTTCTTTCAGTACTG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFFVTAA*HFLSVL
Trigger: CAGTACTGAAAGAAAATGTCATGCTGCAGTCACAAA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTTGAGTTTTGATAACTaGAGTGATTACAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLSFDN*SDYSAR
Trigger: CCTGGCACTGTAATCACTTCAGTTATCAAAACTCAA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTCTGCATATTTTTCTTaGACCTGCTGTGTTTCCATC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFSAYFS*TCCVSI
Trigger: GATGGAAACACAGCAGGTGCAAGAAAAATATGCAGA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTGGAATCTGGTCGTGGTaGTTTAGTTTTTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFGIWSW*FSFSSF
Trigger: AAAGGAAGAAAAACTAAACCACCACGACCAGATTCC...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTATAACTGTTGTGAGTaGCACTGTTTGGAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFYNCCE*HCLECY
Trigger: GTAACACTCCAAACAGTGCCACTCACAACAGTTATA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCATCATCATCGTCTATaGTTTCTTCTTCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFHHHRL*FLLQQH
Trigger: ATGTTGCTGAAGAAGAAATCATAGACGATGATGATG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTGTAAAATAAACTTCTaGGATCCAGTACCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFCKINF*DPVPAD
Trigger: ATCAGCAGGTACTGGATCTCAGAAGTTTATTTTACA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCTTAAGAAAGAGTCTTaGCTCTCTCAAAATAGCAGT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLKKES*LSQNSS
Trigger: ACTGCTATTTTGAGAGAGTCAAGACTCTTTCTTAAG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR TCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTTATGCTTTTATAACTaGCTACTCAGCCAGATTAGC +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLCFYN*LLSQIS
Trigger: GCTAATCTGGCTGAGTAGTCAGTTATAAAAGCATAA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTTTAATGTTTCATCCTaGATGGTACTGGTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFFNVSS*MVLVLA
Trigger: AGCTAGAACCAGTACCATGCAGGATGAAACATTAAA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTTCTCTCAAGCTTCTTaGCCTTCAAGTATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFFSQAS*PSSILS
Trigger: AGAAAGAATACTTGAAGGCCAAGAAGCTTGAGAGAA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239882.7
CDS-3UTR GCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTCTTTAAGAAACTTTTaGCTGAAAACAGACACTGAG +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFSLRNF*LKTDTE
Trigger: CTCAGTGTCTGTTTTCAGGCAAAAGTTTCTTAAAGA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239882.7
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCTCTATGCTGGAACTTaGATCCTCATCATTTATATA +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLYAGT*ILIIYI
Trigger: TATATAAATGATGAGGATCCAAGTTCCAGCATAGAG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CCA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTTAACTAAAAAGAGTTaGGTTCCAGCAGTTCGTTTT +
Preference number: 4 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLTKKS*VPAVRF
Trigger: AAAACGAACTGCTGGAACCCAACTCTTTTTAGTTAA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS GCA 90 bp TGCTGCTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTGCTaGCCACACGCTCCCGAGCTAGGGAACAAGCCCCATCCGAGCGCG +
Preference number: 5 (lower is better)
Translates to: CCCRRRRRRRRRRCC*PHAPELGNKPHPSA
Trigger: CGCGCTCGGATGGGGCTTGTTCCCTAGCTCGGGAGCGTGTGGGCAGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS GCA 90 bp AGCTGCTGCTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTaGTGCCCACACGCTCCCGAGCTAGGGAACAAGCCCCATCCGAGC +
Preference number: 5 (lower is better)
Translates to: SCCCRRRRRRRRRRC*CPHAPELGNKPHPS
Trigger: GCTCGGATGGGGCTTGTTCCCTAGCTCGGGAGCGTGTGGGCAGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS GCA 90 bp GGACCCCGACCCACAGGTCCCGGTTGCTCCGCTGGTCAAAGTGCGTaGGGAGTAGTTGGCAAAGTTGAGAGCGGAGACGTCTCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: GPRPTGPGCSAGQSA*GVVGKVESGDVSGN
Trigger: GTTCCCAGAGACGTCTCCGCTCTCAACTTTGCCAACTACTCCGCACGCACTTTGACCAGCGGAGCAACCGGGACCTGTGGGTCGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS TCA 90 bp CGGTTGCTCCGCTGGTCAAAGTGCGTGCGGAGTAGTTGGCAAAGTTaGGAGCGGAGACGTCTCTGGGAACAGCTGTTTGCGTTCCGGGCG +
Preference number: 5 (lower is better)
Translates to: RLLRWSKCVRSSWQS*ERRRLWEQLFAFRA
Trigger: CGCCCGGAACGCAAACAGCTGTTCCCAGAGACGTCTCCGCTCTCAACTTTGCCAACTACTCCGCACGCACTTTGACCAGCGGAGCAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS-3UTR CAA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACCAGGGCCCAAGACAATaGAAGGAGGAGAGCCCGCCT +
Preference number: 5 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNQGPRQ*KEESPP
Trigger: AGGCGGGCTCTCCTCCTTCAATTGTCTTGGGCCCTG...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS TCA 90 bp AGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCATCCCCGTCATaGCAAGAAGCTTCAACAAACCTGGCTGGCGCAGTGGCTCATTCC +
Preference number: 5 (lower is better)
Translates to: SASAASIVSIVSSPS*QEASTNLAGAVAHS
Trigger: GGAATGAGCCACTGCGCCAGCCAGGTTTGTTGAAGCTTCTTGTCATGACGGGGATGAAACAATTGAAACTATTGAGGCTGCTGAGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CAA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCACCAGGGGAATCCATATaGAGGAGTGCCTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: GESILRSASAASIVSIVSPGESI*RSASAA
Trigger: GGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGG...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CAA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGTTAGGACAAGTAGCCTaGTCCTGGAGCAGTGCCAGT +
Preference number: 5 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMLGQVA*SWSSAS
Trigger: ACTGGCACTGCTCCAGGACAAGGCTACTTGTCCTAA...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CAA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCACTTTTACCCCTGGACTaGAAGATACTCTCGACCGGC +
Preference number: 5 (lower is better)
Translates to: GESILRSASAASIVSIVSLLPLD*KILSTG
Trigger: GCCGGTCGAGAGTATCTTCAAGTCCAGGGGTAAAAG...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CAA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACAGCCCAAGGCTCAAGTaGCTTTCTTGGCCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNSPRLK*LSWPLR
Trigger: TCTTAAGGGCCAAGAAAGCAACTTGAGCCTTGGGCT...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS TCA 90 bp TCATGTCATTGGGCTCTTCCACACAGGCTAGACCGGCATAACTATTaGGAATATCAGCACCAGGAACATGTTCCACAATTACGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: SCHWALPHRLDRHNY*EYQHQEHVPQLRQE
Trigger: TTCCTGCCGTAATTGTGGAACATGTTCCTGGTGCTGATATTCTCAATAGTTATGCCGGTCTAGCCTGTGTGGAAGAGCCCAATGACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000239882.7
ENST00000498824.4
ENST00000625359.1
ENST00000635415.1
CDS-3UTR CAA 90 bp GACTGCAGCATGACATTTTCTTTCAGTACTGTCATGGGCTGTGATGATGGAATGTGCCAGAATACCCCTTaGGTAATAGTACCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: DCSMTFSFSTVMGCDDGMCQNTP*VIVPEC
Trigger: GCACTCAGGTACTATTACCAAAGGGGTATTCTGGCA...CATTCCATCATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CAA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACTGTGAGTGGCACTGTTaGGAGTGTTACTGTATGCAA +
Preference number: 5 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNCEWHC*ECYCMQ
Trigger: TTGCATACAGTAACACTCCAAACAGTGCCACTCACA...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCAGGGCCCAAGACAATaGAAGGAGGAGAGCCCGCCT +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFQGPRQ*KEESPP
Trigger: AGGCGGGCTCTCCTCCTTCAATTGTCTTGGGCCCTG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS TCA 90 bp AGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCATCCCCGTCATaGCAAGAAGCTTCAACTGTAAGGGTGATGTCATCATCATCATCG +
Preference number: 5 (lower is better)
Translates to: SASAASIVSIVSSPS*QEASTVRVMSSSSS
Trigger: CGATGATGATGATGACATCACCCTTACAGTTGAAGCTTCTTGTCATGACGGGGATGAAACAATTGAAACTATTGAGGCTGCTGAGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239882.7
ENST00000625359.1
ENST00000635415.1
CDS GCA 90 bp TCTGGTGATGAGGCTCCCGGTGAGTCTGCATATTTTTCTTGCACCTaGTGTGTTTCCATCACTTCAGGAATCCCATTTATTCGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: SGDEAPGESAYFSCT*CVSITSGIPFIRFS
Trigger: TGAAAAACGAATAAATGGGATTCCTGAAGTGATGGAAACACAGCAGGTGCAAGAAAAATATGCAGACTCACCGGGAGCCTCATCACCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625359.1
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCCAGGGGAATCCATATaGAGGAGTGCCTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFPGESI*RSASAA
Trigger: GGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CAA 90 bp TTGGAGTGTTACTGTATGCAACTGCTGATTCCTAGGAGACACAACCACTGGAACACTTCCACAGGATCTTaGGGTTTTGCAGCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: LECYCMQLLIPRRHNHWNTSTGS*GFAALE
Trigger: TTCTAAAGCTGCAAAACCCAAAGATCCTGTGGAAGT...GTTCCAGTGGTTGTGTCTCCTAGGAATCAGCAGTTGCATACAGTAACACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTTAGGACAAGTAGCCTaGTCCTGGAGCAGTGCCAGT +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLGQVA*SWSSAS
Trigger: ACTGGCACTGCTCCAGGACAAGGCTACTTGTCCTAA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCTTTTACCCCTGGACTaGAAGATACTCTCGACCGGC +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLLPLD*KILSTG
Trigger: GCCGGTCGAGAGTATCTTCAAGTCCAGGGGTAAAAG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CAA 90 bp GGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCAACTCTATGCTGGAACTaGGATCCTCATCATTTATAT +
Preference number: 5 (lower is better)
Translates to: GESILRSASAASIVSIVSTLCWN*DPHHLY
Trigger: ATATAAATGATGAGGATCCAAGTTCCAGCATAGAGT...TGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCACAACCACTGGAACTaGGGTTGGAGCCTGTATAGT +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFHNHWN*GWSLYS
Trigger: ACTATACAGGCTCCAACCCAAGTTCCAGTGGTTGTG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTAGCCCAAGGCTCAAGTaGCTTTCTTGGCCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFSPRLK*LSWPLR
Trigger: TCTTAAGGGCCAAGAAAGCAACTTGAGCCTTGGGCT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTCAGTAATCATGTCATaGGGCTCTTCCACACAGGCT +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFSVIMS*GSSTQA
Trigger: AGCCTGTGTGGAAGAGCCCAATGACATGATTACTGA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTGCCAGAATACCCCTTaGGTAATAGTACCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFCQNTP*VIVPEC
Trigger: GCACTCAGGTACTATTACCAAAGGGGTATTCTGGCA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTGTGAGTGGCACTGTTaGGAGTGTTACTGTATGCAA +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFCEWHC*ECYCMQ
Trigger: TTGCATACAGTAACACTCCAAACAGTGCCACTCACA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTCTTCTCTCAAGCTTCTaGGCCTTCAAGTATTCTTTC +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFLLSSF*AFKYSF
Trigger: GAAAGAATACTTGAAGGCCAAGAAGCTTGAGAGAAG...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239882.7
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTACTTCCACAGGATCTTaGGGTTTTGCAGCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFTSTGS*GFAALE
Trigger: TTCTAAAGCTGCAAAACCCAAAGATCCTGTGGAAGT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTTTCCAGCAGTTCGTTTaGTTTCATAGCTACCTGAGA +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFFQQFV*FHSYLR
Trigger: TCTCAGGTAGCTATGAAACAAAACGAACTGCTGGAA...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTACTCCCAAAGATAAATaGTGTTTCCCTTTCCATCTT +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFTPKDK*CFPFHL
Trigger: AAGATGGAAAGGGAAACACAATTTATCTTTGGGAGT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS-3UTR CAA 90 bp TTACTAATGGACCGCAAAGCACAGTGGCCTAAAGAGTTAGTAAACAAATTATTTACTCTATGCTGGAACTaGGATCCTCATCATTTATAT +
Preference number: 5 (lower is better)
Translates to: LLMDRKAQWPKELVNKLFTLCWN*DPHHLY
Trigger: ATATAAATGATGAGGATCCAAGTTCCAGCATAGAGT...AAATAATTTGTTTACTAACTCTTTAGGCCACTGTGCTTTGCGGTCCATTAGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239882.7
ENST00000498824.4
CDS GCA 72 bp CGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTGCTaGCCACACGCTCCCGAGCTAGGGAACAAGCCCCAT +
Preference number: 6 (lower is better)
Translates to: RRRRRRRRRRCC*PHAPELGNKPH
Trigger: ATGGGGCTTGTTCCCTAGCTCGGGAGCGTGTGGGCAGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS GCA 72 bp TGCTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTaGTGCTGCCCACACGCTCCCGAGCTAGGGAACAAG +
Preference number: 6 (lower is better)
Translates to: CCRRRRRRRRRR*CCPHAPELGNK
Trigger: CTTGTTCCCTAGCTCGGGAGCGTGTGGGCAGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS CAA 72 bp AGGAGGGGCGGGGCCGCTCCGCTGCAACAGCAAAGTTaGAGGCGAAGCCTAGCGACTCGCAGCGCCGGTCCC +
Preference number: 6 (lower is better)
Translates to: RRGGAAPLQQQS*RRSLATRSAGP
Trigger: GGGACCGGCGCTGCGAGTCGCTAGGCTTCGCCTCAAACTTTGCTGTTGCAGCGGAGCGGCCCCGCCCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS TCA 72 bp CACAGAGACGGCGGGATGGCGCAGGGACTTGAGGCTTaGGATCCCGTCCTTCAGCTCAGGTCCCGTCGCGCT +
Preference number: 6 (lower is better)
Translates to: HRDGGMAQGLEA*DPVLQLRSRRA
Trigger: AGCGCGACGGGACCTGAGCTGAAGGACGGGATCTCAAGCCTCAAGTCCCTGCGCCATCCCGCCGTCTCTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS TCA 72 bp GGGAGGACACAGAGACGGCGGGATGGCGCAGGGACTTaGGGCTTGAGATCCCGTCCTTCAGCTCAGGTCCCG +
Preference number: 6 (lower is better)
Translates to: GRTQRRRDGAGT*GLRSRPSAQVP
Trigger: CGGGACCTGAGCTGAAGGACGGGATCTCAAGCCTCAAGTCCCTGCGCCATCCCGCCGTCTCTGTGTCCTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS CAA 72 bp GGGGAGGACACAGAGACGGCGGGATGGCGCAGGGACTaGAGGCTTGAGATCCCGTCCTTCAGCTCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: GEDTETAGWRRD*RLEIPSFSSGP
Trigger: GGGACCTGAGCTGAAGGACGGGATCTCAAGCCTCAAGTCCCTGCGCCATCCCGCCGTCTCTGTGTCCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS GCA 72 bp AAGTTGAGAGCGGAGACGTCTCTGGGAACAGCTGTTTaGGTTCCGGGCGGAGGCGGCGCGCTGAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: KLRAETSLGTAV*VPGGGGALSSL
Trigger: CAAGGAGCTCAGCGCGCCGCCTCCGCCCGGAACGCAAACAGCTGTTCCCAGAGACGTCTCCGCTCTCAACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS CAA 90 bp GTAGTTGGCAAAGTTGAGAGCGGAGACGTCTCTGGGAACAGCTGTTaGCGTTCCGGGCGGAGGCGGCGCGCTGAGCTCCTTGGCCTTGAG +
Preference number: 6 (lower is better)
Translates to: VVGKVESGDVSGNSC*RSGRRRRAELLGLE
Trigger: CTCAAGGCCAAGGAGCTCAGCGCGCCGCCTCCGCCCGGAACGCAAACAGCTGTTCCCAGAGACGTCTCCGCTCTCAACTTTGCCAACTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS CAA 72 bp AAAGTTGAGAGCGGAGACGTCTCTGGGAACAGCTGTTaGCGTTCCGGGCGGAGGCGGCGCGCTGAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: KVESGDVSGNSC*RSGRRRRAELL
Trigger: AAGGAGCTCAGCGCGCCGCCTCCGCCCGGAACGCAAACAGCTGTTCCCAGAGACGTCTCCGCTCTCAACTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS GCA 72 bp CCCACAGGTCCCGGTTGCTCCGCTGGTCAAAGTGCGTaGGGAGTAGTTGGCAAAGTTGAGAGCGGAGACGTC +
Preference number: 6 (lower is better)
Translates to: PTGPGCSAGQSA*GVVGKVESGDV
Trigger: GACGTCTCCGCTCTCAACTTTGCCAACTACTCCGCACGCACTTTGACCAGCGGAGCAACCGGGACCTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS TCA 72 bp CGCTGGTCAAAGTGCGTGCGGAGTAGTTGGCAAAGTTaGGAGCGGAGACGTCTCTGGGAACAGCTGTTTGCG +
Preference number: 6 (lower is better)
Translates to: RWSKCVRSSWQS*ERRRLWEQLFA
Trigger: CGCAAACAGCTGTTCCCAGAGACGTCTCCGCTCTCAACTTTGCCAACTACTCCGCACGCACTTTGACCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405737.2
CDS TCA 72 bp GCAGCCTCAATAGTTTCAATTGTTTCATCCCCGTCATaGCAAGAAGCTTCAACAAACCTGGCTGGCGCAGTG +
Preference number: 6 (lower is better)
Translates to: AASIVSIVSSPS*QEASTNLAGAV
Trigger: CACTGCGCCAGCCAGGTTTGTTGAAGCTTCTTGTCATGACGGGGATGAAACAATTGAAACTATTGAGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498824.4
CDS TCA 72 bp TGGGCTCTTCCACACAGGCTAGACCGGCATAACTATTaGGAATATCAGCACCAGGAACATGTTCCACAATTA +
Preference number: 6 (lower is better)
Translates to: WALPHRLDRHNY*EYQHQEHVPQL
Trigger: TAATTGTGGAACATGTTCCTGGTGCTGATATTCTCAATAGTTATGCCGGTCTAGCCTGTGTGGAAGAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000239882.7
ENST00000498824.4
ENST00000625359.1
ENST00000635415.1
CDS GCA 72 bp GAGGCTCCCGGTGAGTCTGCATATTTTTCTTGCACCTaGTGTGTTTCCATCACTTCAGGAATCCCATTTATT +
Preference number: 6 (lower is better)
Translates to: EAPGESAYFSCT*CVSITSGIPFI
Trigger: AATAAATGGGATTCCTGAAGTGATGGAAACACAGCAGGTGCAAGAAAAATATGCAGACTCACCGGGAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625359.1
CDS CCA 72 bp AGGAACATGTTCCACAATTACGGCAGGAAAAATAGCTaGATCACCAAGCTGTCGTTCATCCTCCATGACGTT +
Preference number: 6 (lower is better)
Translates to: RNMFHNYGRKNS*ITKLSFILHDV
Trigger: AACGTCATGGAGGATGAACGACAGCTTGGTGATCCAGCTATTTTTCCTGCCGTAATTGTGGAACATGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000239882.7
ENST00000498824.4
ENST00000625359.1
ENST00000635415.1
CDS CAA 90 bp CCATTTATTCGTTTTTCATCCAGCATAGGGCCAGGGGAATCCATATaGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCATCC +
Preference number: 6 (lower is better)
Translates to: PFIRFSSSIGPGESI*RSASAASIVSIVSS
Trigger: GGATGAAACAATTGAAACTATTGAGGCTGCTGAGGCACTCCTCAATATGGATTCCCCTGGCCCTATGCTGGATGAAAAACGAATAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625359.1
CDS TCA 72 bp GCAGCCTCAATAGTTTCAATTGTTTCATCCCCGTCATaGCAAGAAGCTTCAACTGTAAGGGTGATGTCATCA +
Preference number: 6 (lower is better)
Translates to: AASIVSIVSSPS*QEASTVRVMSS
Trigger: TGATGACATCACCCTTACAGTTGAAGCTTCTTGTCATGACGGGGATGAAACAATTGAAACTATTGAGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239882.7
ENST00000625359.1
ENST00000635415.1