RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELAVL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000066044

Ensembl transcript IDs: ENST00000407627.7, ENST00000593807.1, ENST00000595499.1, ENST00000596154.5, ENST00000596459.5

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGGAGGGCCCGCCCAGCATGCAGCCCGTGGCCCCCGGCCCCAGTaGTGGCCCACGCTGGACGGGCCCGCCGCCATTCCCAGGACCACT +
Preference number: 1 (lower is better)
Translates to: SGGPAQHAARGPRPQ*WPTLDGPAAIPRTT
Trigger: AGTGGTCCTGGGAATGGCGGCGGGCCCGTCCAGCGTGGGCCACCACTGGGGCCGGGGGCCACGGGCTGCATGCTGGGCGGGCCCTCCAGA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 90 bp CTTACGAAACACGTTTGTGTCCTTCTCTGGAGGGCCCGCCCAGCATaGAGCCCGTGGCCCCCGGCCCCAGTGGTGGCCCACGCTGGACGG +
Preference number: 1 (lower is better)
Translates to: LTKHVCVLLWRARPA*SPWPPAPVVAHAGR
Trigger: CCGTCCAGCGTGGGCCACCACTGGGGCCGGGGGCCACGGGCTGCATGCTGGGCGGGCCCTCCAGAGAAGGACACAAACGTGTTTCGTAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp GGCAGCTGCCCTTGGCCAGGAAAAGGCTCACCTTCCAGGAGAAGGTaGCGGAACCCACCCAGCACCACCTGCGGGCGGGCCCCCGAGGAA +
Preference number: 1 (lower is better)
Translates to: GSCPWPGKGSPSRRR*RNPPSTTCGRAPEE
Trigger: TTCCTCGGGGGCCCGCCCGCAGGTGGTGCTGGGTGGGTTCCGCCACCTTCTCCTGGAAGGTGAGCCTTTTCCTGGCCAAGGGCAGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp GATCCAGCAGGGACCCCTGGGCTGCCGGCTCCAAAGGGCCGGTCTTaGCTCCCAACAGCAGCACGGTTCAGTCCCTGGAGGCTGGGTCTC +
Preference number: 1 (lower is better)
Translates to: DPAGTPGLPAPKGRS*LPTAARFSPWRLGL
Trigger: GAGACCCAGCCTCCAGGGACTGAACCGTGCTGCTGTTGGGAGCCAAGACCGGCCCTTTGGAGCCGGCAGCCCAGGGGTCCCTGCTGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 90 bp GCCCGCCGCCATTCCCAGGACCACTCGGCAGAGCCCGGGACTGAGTaGGCAGGAGGTGGCAACGGGACCTGCCTGGAAAAGGAACTTCCT +
Preference number: 1 (lower is better)
Translates to: ARRHSQDHSAEPGTE*AGGGNGTCLEKELP
Trigger: AGGAAGTTCCTTTTCCAGGCAGGTCCCGTTGCCACCTCCTGCTCACTCAGTCCCGGGCTCTGCCGAGTGGTCCTGGGAATGGCGGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp TTCCCATTGGTGCCTGGGCTTACGAAACACGTTTGTGTCCTTCTCTaGAGGGCCCGCCCAGCATGCAGCCCGTGGCCCCCGGCCCCAGTG +
Preference number: 1 (lower is better)
Translates to: FPLVPGLTKHVCVLL*RARPACSPWPPAPV
Trigger: CACTGGGGCCGGGGGCCACGGGCTGCATGCTGGGCGGGCCCTCCAGAGAAGGACACAAACGTGTTTCGTAAGCCCAGGCACCAATGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 90 bp GGCTCACCTTCCAGGAGAAGGTGGCGGAACCCACCCAGCACCACCTaGGGGCGGGCCCCCGAGGAAGCCCATGAATTTCAGGATATTCAC +
Preference number: 1 (lower is better)
Translates to: GSPSRRRWRNPPSTT*GRAPEEAHEFQDIH
Trigger: GTGAATATCCTGAAATTCATGGGCTTCCTCGGGGGCCCGCCCGCAGGTGGTGCTGGGTGGGTTCCGCCACCTTCTCCTGGAAGGTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 90 bp GAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCATGTaGTCGACGCCCATGGGGGAGAACCTCCTCAGCCTCCTCAAACCA +
Preference number: 1 (lower is better)
Translates to: EEAFPGTLTPESPLM*STPMGENLLSLLKP
Trigger: TGGTTTGAGGAGGCTGAGGAGGTTCTCCCCCATGGGCGTCGATCACATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593807.1
3UTR GCA 90 bp TCTTCGGGTGCTTCTATTTCTCTGATCCAGCAGGGACCCCTGGGCTaGCGGCTCCAAAGGGCCGGTCTTGGCTCCCAACAGCAGCACGGT +
Preference number: 1 (lower is better)
Translates to: SSGASISLIQQGPLG*RLQRAGLGSQQQHG
Trigger: ACCGTGCTGCTGTTGGGAGCCAAGACCGGCCCTTTGGAGCCGGCAGCCCAGGGGTCCCTGCTGGATCAGAGAAATAGAAGCACCCGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp GCCGGTCTTGGCTCCCAACAGCAGCACGGTTCAGTCCCTGGAGGCTaGGTCTCCAGGACTAAGGCCAAGCGCAGACTCTCAGAGGTTAAG +
Preference number: 1 (lower is better)
Translates to: AGLGSQQQHGSVPGG*VSRTKAKRRLSEVK
Trigger: CTTAACCTCTGAGAGTCTGCGCTTGGCCTTAGTCCTGGAGACCCAGCCTCCAGGGACTGAACCGTGCTGCTGTTGGGAGCCAAGACCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 90 bp GGTCAAGGAATTGCCACTAACCGTCTTCGGGTGCTTCTATTTCTCTaGTCCAGCAGGGACCCCTGGGCTGCCGGCTCCAAAGGGCCGGTC +
Preference number: 1 (lower is better)
Translates to: GQGIATNRLRVLLFL*SSRDPWAAGSKGPV
Trigger: GACCGGCCCTTTGGAGCCGGCAGCCCAGGGGTCCCTGCTGGATCAGAGAAATAGAAGCACCCGAAGACGGTTAGTGGCAATTCCTTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 90 bp GGATGGGCATCCTCAATTGTCCAGGGGCCTCTCGAGACGCTGACCTaGTCTGGGGACGGTGGTGCCTGCCTATTGCTCAATTTCACACTT +
Preference number: 1 (lower is better)
Translates to: GWASSIVQGPLETLT*SGDGGACLLLNFTL
Trigger: AAGTGTGAAATTGAGCAATAGGCAGGCACCACCGTCCCCAGAGCAGGTCAGCGTCTCGAGAGGCCCCTGGACAATTGAGGATGCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp TCGAATCCGGGCAATGGGCCTCGGTTTTGGCTTTTCCTGAGGATCTaGGATTCTGTGGGAGAAAGGAGGTCCTCTCTGGCACCAGGCCGA +
Preference number: 1 (lower is better)
Translates to: SNPGNGPRFWLFLRI*DSVGERRSSLAPGR
Trigger: TCGGCCTGGTGCCAGAGAGGACCTCCTTTCTCCCACAGAATCCCAGATCCTCAGGAAAAGCCAAAACCGAGGCCCATTGCCCGGATTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 90 bp TTGGAAGCAAACCGGGTCAAGGAATTGCCACTAACCGTCTTCGGGTaGTTCTATTTCTCTGATCCAGCAGGGACCCCTGGGCTGCCGGCT +
Preference number: 1 (lower is better)
Translates to: LEANRVKELPLTVFG*FYFSDPAGTPGLPA
Trigger: AGCCGGCAGCCCAGGGGTCCCTGCTGGATCAGAGAAATAGAAGCACCCGAAGACGGTTAGTGGCAATTCCTTGACCCGGTTTGCTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp GGCATCCTCAATTGTCCAGGGGCCTCTCGAGACGCTGACCTGCTCTaGGGACGGTGGTGCCTGCCTATTGCTCAATTTCACACTTCAATA +
Preference number: 1 (lower is better)
Translates to: GILNCPGASRDADLL*GRWCLPIAQFHTSI
Trigger: TATTGAAGTGTGAAATTGAGCAATAGGCAGGCACCACCGTCCCCAGAGCAGGTCAGCGTCTCGAGAGGCCCCTGGACAATTGAGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp CTCTGGCACCAGGCCGACTTTTATGAGACACAGCCTGGGTACGGATaGCAACATCATCAATTTGCAAGGATCGCGCACACAGCCCCTCAG +
Preference number: 1 (lower is better)
Translates to: LWHQADFYETQPGYG*QHHQFARIAHTAPQ
Trigger: CTGAGGGGCTGTGTGCGCGATCCTTGCAAATTGATGATGTTGCCATCCGTACCCAGGCTGTGTCTCATAAAAGTCGGCCTGGTGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp TACTGGAGTTTCCCTGAAACTCTTTGGTCCATTCCCATTGGTGCCTaGGCTTACGAAACACGTTTGTGTCCTTCTCTGGAGGGCCCGCCC +
Preference number: 1 (lower is better)
Translates to: YWSFPETLWSIPIGA*AYETRLCPSLEGPP
Trigger: GGGCGGGCCCTCCAGAGAAGGACACAAACGTGTTTCGTAAGCCCAGGCACCAATGGGAATGGACCAAAGAGTTTCAGGGAAACTCCAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 90 bp TCTGTGGGAGAAAGGAGGTCCTCTCTGGCACCAGGCCGACTTTTATaGGACACAGCCTGGGTACGGATGGCAACATCATCAATTTGCAAG +
Preference number: 1 (lower is better)
Translates to: SVGERRSSLAPGRLL*DTAWVRMATSSICK
Trigger: CTTGCAAATTGATGATGTTGCCATCCGTACCCAGGCTGTGTCTCATAAAAGTCGGCCTGGTGCCAGAGAGGACCTCCTTTCTCCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp GTGAACAACAGTATCCAATGTGTGGGGCGCTGTGCATGCAATGTGTaGACAGAAACTCGGGATGTCAGAGTAGCAACACATCTTCAGGCG +
Preference number: 1 (lower is better)
Translates to: VNNSIQCVGRCACNV*TETRDVRVATHLQA
Trigger: CGCCTGAAGATGTGTTGCTACTCTGACATCCCGAGTTTCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 90 bp AACACGAACCTGATACCTGTAGAAAGAACTGAGTATCGGGACAATTaGGTCGTTGGAACTGTAAGCCACGCCCCAAACCGCATCACTCCG +
Preference number: 1 (lower is better)
Translates to: NTNLIPVERTEYRDN*VVGTVSHAPNRITP
Trigger: CGGAGTGATGCGGTTTGGGGCGTGGCTTACAGTTCCAACGACTCAATTGTCCCGATACTCAGTTCTTTCTACAGGTATCAGGTTCGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 90 bp TGGACAGAAACTCGGGATGTCAGAGTAGCAACACATCTTCAGGCGTaGCTGGAGCTTAGATCTGACTCTGGAATATACTGGAGTTTCCCT +
Preference number: 1 (lower is better)
Translates to: WTETRDVRVATHLQA*LELRSDSGIYWSFP
Trigger: AGGGAAACTCCAGTATATTCCAGAGTCAGATCTAAGCTCCAGGCACGCCTGAAGATGTGTTGCTACTCTGACATCCCGAGTTTCTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 90 bp GGGAGAAATTATCGTGAACAACAGTATCCAATGTGTGGGGCGCTGTaGATGCAATGTGTGGACAGAAACTCGGGATGTCAGAGTAGCAAC +
Preference number: 1 (lower is better)
Translates to: GRNYREQQYPMCGAL*MQCVDRNSGCQSSN
Trigger: GTTGCTACTCTGACATCCCGAGTTTCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACGATAATTTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 90 bp GAACAAGGGAGAATTCATCAGGAAGCAGGTTCACAAATTCGGAGCTaGCTGGGGTCTAACTACCAGAGGAAGTTACACACGGGTCAAAAG +
Preference number: 1 (lower is better)
Translates to: EQGRIHQEAGSQIRS*LGSNYQRKLHTGQK
Trigger: CTTTTGACCCGTGTGTAACTTCCTCTGGTAGTTAGACCCCAGGCAGCTCCGAATTTGTGAACCTGCTTCCTGATGAATTCTCCCTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 90 bp ATCAGTCACAGAGCTGCGACTAGAGGCACAGCCAGCACAGAAAACTaGGGCTTGGCAAATTACACTGAAAACGAAATAATGGCAGAGCCA +
Preference number: 1 (lower is better)
Translates to: ISHRAATRGTASTEN*GLANYTENEIMAEP
Trigger: TGGCTCTGCCATTATTTCGTTTTCAGTGTAATTTGCCAAGCCGCAGTTTTCTGTGCTGGCTGTGCCTCTAGTCGCAGCTCTGTGACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp AAGGGAGAATTCATCAGGAAGCAGGTTCACAAATTCGGAGCTGCCTaGGGTCTAACTACCAGAGGAAGTTACACACGGGTCAAAAGGGAA +
Preference number: 1 (lower is better)
Translates to: KGEFIRKQVHKFGAA*GLTTRGSYTRVKRE
Trigger: TTCCCTTTTGACCCGTGTGTAACTTCCTCTGGTAGTTAGACCCCAGGCAGCTCCGAATTTGTGAACCTGCTTCCTGATGAATTCTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 90 bp CTAGTTATTTATAAACGCCAGATCCCAGTCCTGAGGAGTTTTGGGTaGTCTGGCCCTGCCTATTTCACAGGCTTTCTCTTTCACCCTTCC +
Preference number: 1 (lower is better)
Translates to: LVIYKRQIPVLRSFG*SGPAYFTGFLFHPS
Trigger: GGAAGGGTGAAAGAGAAAGCCTGTGAAATAGGCAGGGCCAGATCACCCAAAACTCCTCAGGACTGGGATCTGGCGTTTATAAATAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp GCAAGTCACTGTAAACGGAACATCACATGGTCATGGTCAAAGAGGTaGCCCCAAACCAACGGAAAAGGCTTCTCTTCTGGTGGAAGAAAA +
Preference number: 1 (lower is better)
Translates to: ASHCKRNITWSWSKR*PQTNGKGFSSGGRK
Trigger: TTTTCTTCCACCAGAAGAGAAGCCTTTTCCGTTGGTTTGGGGCCACCTCTTTGACCATGACCATGTGATGTTCCGTTTACAGTGACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 90 bp GAAATTATCGTGAACAACAGTATCCAATGTGTGGGGCGCTGTGCATaGAATGTGTGGACAGAAACTCGGGATGTCAGAGTAGCAACACAT +
Preference number: 1 (lower is better)
Translates to: EIIVNNSIQCVGRCA*NVWTETRDVRVATH
Trigger: ATGTGTTGCTACTCTGACATCCCGAGTTTCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACGATAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp CAGCTGAGTGATGTCAATTTCGATTTTTCAAGTCCGATGCCGGACTaGGTAAGTCATGTCTTTTCAATGCCTGGTGGACAAATGGCCTTC +
Preference number: 1 (lower is better)
Translates to: QLSDVNFDFSSPMPD*VSHVFSMPGGQMAF
Trigger: GAAGGCCATTTGTCCACCAGGCATTGAAAAGACATGACTTACCCAGTCCGGCATCGGACTTGAAAAATCGAAATTGACATCACTCAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 90 bp CCTCCAAGCTATGTTAAATGCTCTGGAAAACGGGAGAAATTATCGTaGACAACAGTATCCAATGTGTGGGGCGCTGTGCATGCAATGTGT +
Preference number: 1 (lower is better)
Translates to: PPSYVKCSGKREKLS*TTVSNVWGAVHAMC
Trigger: ACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACGATAATTTCTCCCGTTTTCCAGAGCATTTAACATAGCTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 90 bp ATCCAGCCATTAGAGGTCAGGGGAAATCAAAAAGGTTTGGAAATGTaGACCCTGCCTGGGATCCGAGATTCAGATTCTACTGCCATCATT +
Preference number: 1 (lower is better)
Translates to: IQPLEVRGNQKGLEM*TLPGIRDSDSTAII
Trigger: AATGATGGCAGTAGAATCTGAATCTCGGATCCCAGGCAGGGTTCACATTTCCAAACCTTTTTGATTTCCCCTGACCTCTAATGGCTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 90 bp CTTAGATCTGACTCTGGAATATACTGGAGTTTCCCTGAAACTCTTTaGTCCATTCCCATTGGTGCCTGGGCTTACGAAACACGTTTGTGT +
Preference number: 1 (lower is better)
Translates to: LRSDSGIYWSFPETL*SIPIGAWAYETRLC
Trigger: ACACAAACGTGTTTCGTAAGCCCAGGCACCAATGGGAATGGACCAAAGAGTTTCAGGGAAACTCCAGTATATTCCAGAGTCAGATCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 90 bp AGGAAAGAAGCTGAGGTGCTACAAGCCCGTCATCATTTTCACAGTTaGAGCTTAAGACAGAGTTCTCTGTTGAATGCTAGCTATGGGCAT +
Preference number: 1 (lower is better)
Translates to: RKEAEVLQARHHFHS*SLRQSSLLNASYGH
Trigger: ATGCCCATAGCTAGCATTCAACAGAGAACTCTGTCTTAAGCTTCAACTGTGAAAATGATGACGGGCTTGTAGCACCTCAGCTTCTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
3UTR GCA 90 bp GATTGGTCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTaGATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAA +
Preference number: 1 (lower is better)
Translates to: DWSNIVGFQTFEHVG*IPEYKNLLTSHSDK
Trigger: TTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGACCAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
3UTR-3UTR CCA 90 bp GGCCGGGGAGGGGACTCAGCACCCGGGAGGGAATCAGTCACAGAGCTGCGACTAAGTGGTGGCCCACGCTaGACGGGCCCGCCGCCATTC +
Preference number: 2 (lower is better)
Translates to: GRGGDSAPGRESVTELRLSGGPR*TGPPPF
Trigger: GAATGGCGGCGGGCCCGTCCAGCGTGGGCCACCACT...TAGTCGCAGCTCTGTGACTGATTCCCTCCCGGGTGCTGAGTCCCCTCCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CCA 90 bp GGCCGGGGAGGGGACTCAGCACCCGGGAGGGAATCAGTCACAGAGCTGCGACTAGCAACGGGACCTGCCTaGAAAAGGAACTTCCTGTCA +
Preference number: 2 (lower is better)
Translates to: GRGGDSAPGRESVTELRLATGPA*KRNFLS
Trigger: TGACAGGAAGTTCCTTTTCCAGGCAGGTCCCGTTGC...TAGTCGCAGCTCTGTGACTGATTCCCTCCCGGGTGCTGAGTCCCCTCCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 90 bp ACTCTTTGGTCCATTCCCATTGGTGCCTGGGCTTACGAAACACGTTaGTGTCCTTCTCTGGAGGGCCCGCCCAGCATGCAGCCCGTGGCC +
Preference number: 2 (lower is better)
Translates to: TLWSIPIGAWAYETR*CPSLEGPPSMQPVA
Trigger: GGCCACGGGCTGCATGCTGGGCGGGCCCTCCAGAGAAGGACACAAACGTGTTTCGTAAGCCCAGGCACCAATGGGAATGGACCAAAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 90 bp GGACTAAGGCCAAGCGCAGACTCTCAGAGGTTAAGGCAGCTGCCCTaGGCCAGGAAAAGGCTCACCTTCCAGGAGAAGGTGGCGGAACCC +
Preference number: 2 (lower is better)
Translates to: GLRPSADSQRLRQLP*ARKRLTFQEKVAEP
Trigger: GGGTTCCGCCACCTTCTCCTGGAAGGTGAGCCTTTTCCTGGCCAAGGGCAGCTGCCTTAACCTCTGAGAGTCTGCGCTTGGCCTTAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR GCA 90 bp GGCCGGGGAGGGGACTCAGCACCCGGGAGGGAATCAGTCACAGAGCTGCGACTACCACCAGCCTGTAACTaGACATTCTTGCGTCACAGA +
Preference number: 2 (lower is better)
Translates to: GRGGDSAPGRESVTELRLPPACN*TFLRHR
Trigger: TCTGTGACGCAAGAATGTGCAGTTACAGGCTGGTGG...TAGTCGCAGCTCTGTGACTGATTCCCTCCCGGGTGCTGAGTCCCCTCCCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CCA 90 bp GGCCGGGGAGGGGACTCAGCACCCGGGAGGGAATCAGTCACAGAGCTGCGACTAATTCCCATTGGTGCCTaGGCTTACGAAACACGTTTG +
Preference number: 2 (lower is better)
Translates to: GRGGDSAPGRESVTELRLIPIGA*AYETRL
Trigger: CAAACGTGTTTCGTAAGCCCAGGCACCAATGGGAAT...TAGTCGCAGCTCTGTGACTGATTCCCTCCCGGGTGCTGAGTCCCCTCCCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CCA 90 bp CATACAGCGTTTAACACGAACCTGATACCTGTAGAAAGAACTGAGTATCGGGACGCACGGTTCAGTCCCTaGAGGCTGGGTCTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: HTAFNTNLIPVERTEYRDARFSP*RLGLQD
Trigger: GTCCTGGAGACCCAGCCTCCAGGGACTGAACCGTGC...GTCCCGATACTCAGTTCTTTCTACAGGTATCAGGTTCGTGTTAAACGCTGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR GCA 90 bp AAGGAGGTCCTCTCTGGCACCAGGCCGACTTTTATGAGACACAGCCTGGGTACGGTAACTGCACATTCTTaGGTCACAGATTCAGAAATG +
Preference number: 2 (lower is better)
Translates to: KEVLSGTRPTFMRHSLGTVTAHS*VTDSEM
Trigger: CATTTCTGAATCTGTGACGCAAGAATGTGCAGTTAC...CGTACCCAGGCTGTGTCTCATAAAAGTCGGCCTGGTGCCAGAGAGGACCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CCA 90 bp CTTTTGCTTGAGGCAAGGATTGGTTTCTTAAGATCTTACGACTCCTCCCTGAATGTTTGTGTCCTTCTCTaGAGGGCCCGCCCAGCATGC +
Preference number: 2 (lower is better)
Translates to: LLLEARIGFLRSYDSSLNVCVLL*RARPAC
Trigger: GCATGCTGGGCGGGCCCTCCAGAGAAGGACACAAAC...ATTCAGGGAGGAGTCGTAAGATCTTAAGAAACCAATCCTTGCCTCAAGCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 90 bp CTGGAATATACTGGAGTTTCCCTGAAACTCTTTGGTCCATTCCCATaGGTGCCTGGGCTTACGAAACACGTTTGTGTCCTTCTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: LEYTGVSLKLFGPFP*VPGLTKHVCVLLWR
Trigger: CCTCCAGAGAAGGACACAAACGTGTTTCGTAAGCCCAGGCACCAATGGGAATGGACCAAAGAGTTTCAGGGAAACTCCAGTATATTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 90 bp GGTAAGTCATGTCTTTTCAATGCCTGGTGGACAAATGGCCTTCATTaGGAAGCAAACCGGGTCAAGGAATTGCCACTAACCGTCTTCGGG +
Preference number: 2 (lower is better)
Translates to: GKSCLFNAWWTNGLH*EANRVKELPLTVFG
Trigger: CCCGAAGACGGTTAGTGGCAATTCCTTGACCCGGTTTGCTTCCAAATGAAGGCCATTTGTCCACCAGGCATTGAAAAGACATGACTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR TCA 90 bp TCACATGGTCATGGTCAAAGAGGTGGCCCCAAACCAACGGAAAAGGCTTCTCTTGGGATTTCAAACATTTaGACATGTCGGTTGCATCCC +
Preference number: 2 (lower is better)
Translates to: SHGHGQRGGPKPTEKASLGISNI*TCRLHP
Trigger: GGGATGCAACCGACATGTTCAAATGTTTGAAATCCC...AAGAGAAGCCTTTTCCGTTGGTTTGGGGCCACCTCTTTGACCATGACCATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR TCA 90 bp GCAAATTACACTGAAAACGAAATAATGGCAGAGCCAAGGGGGAACAAGGGAGAAAGATGTAATGAACTTTaGGGACACAGGGCCAGCAAC +
Preference number: 2 (lower is better)
Translates to: ANYTENEIMAEPRGNKGERCNEL*GHRASN
Trigger: GTTGCTGGCCCTGTGTCCTCAAAGTTCATTACATCT...TTCTCCCTTGTTCCCCCTTGGCTCTGCCATTATTTCGTTTTCAGTGTAATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 90 bp CAGCCTGTAACTGCACATTCTTGCGTCACAGATTCAGAAATGCTTTaGCTTGAGGCAAGGATTGGTTTCTTAAGATCTTACGACTCCTCC +
Preference number: 2 (lower is better)
Translates to: QPVTAHSCVTDSEML*LEARIGFLRSYDSS
Trigger: GGAGGAGTCGTAAGATCTTAAGAAACCAATCCTTGCCTCAAGCAAAAGCATTTCTGAATCTGTGACGCAAGAATGTGCAGTTACAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR GCA 90 bp CATACAGCGTTTAACACGAACCTGATACCTGTAGAAAGAACTGAGTATCGGGACCTAACCGTCTTCGGGTaGTTCTATTTCTCTGATCCA +
Preference number: 2 (lower is better)
Translates to: HTAFNTNLIPVERTEYRDLTVFG*FYFSDP
Trigger: TGGATCAGAGAAATAGAAGCACCCGAAGACGGTTAG...GTCCCGATACTCAGTTCTTTCTACAGGTATCAGGTTCGTGTTAAACGCTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CCA 90 bp ACATTATCTACTCTGAACGCTTTTTCATCGAAATTCCCAAATAAAAGCAGAGCACTGCTCTGGGGACGGTaGTGCCTGCCTATTGCTCAA +
Preference number: 2 (lower is better)
Translates to: TLSTLNAFSSKFPNKSRALLWGR*CLPIAQ
Trigger: TTGAGCAATAGGCAGGCACCACCGTCCCCAGAGCAG...TGCTCTGCTTTTATTTGGGAATTTCGATGAAAAAGCGTTCAGAGTAGATAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR TCA 90 bp CTTTTGCTTGAGGCAAGGATTGGTTTCTTAAGATCTTACGACTCCTCCCTGAATAGTCTGTGGAGACATTaGATGAAACGCGTGTTAGAC +
Preference number: 2 (lower is better)
Translates to: LLLEARIGFLRSYDSSLNSLWRH*MKRVLD
Trigger: GTCTAACACGCGTTTCATTCAATGTCTCCACAGACT...ATTCAGGGAGGAGTCGTAAGATCTTAAGAAACCAATCCTTGCCTCAAGCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR TCA 90 bp CATACAGCGTTTAACACGAACCTGATACCTGTAGAAAGAACTGAGTATCGGGACAGGCCTCCTGTCAGCTaGATTCTTATTCTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: HTAFNTNLIPVERTEYRDRPPVS*ILILFH
Trigger: ATGAAAGAGAATAAGAATTCAGCTGACAGGAGGCCT...GTCCCGATACTCAGTTCTTTCTACAGGTATCAGGTTCGTGTTAAACGCTGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR GCA 90 bp CTTTTGCTTGAGGCAAGGATTGGTTTCTTAAGATCTTACGACTCCTCCCTGAATTTAGAGGTTAAAGCATaGTTCAGGTTCACCACCATC +
Preference number: 2 (lower is better)
Translates to: LLLEARIGFLRSYDSSLNLEVKA*FRFTTI
Trigger: GATGGTGGTGAACCTGAAGCATGCTTTAACCTCTAA...ATTCAGGGAGGAGTCGTAAGATCTTAAGAAACCAATCCTTGCCTCAAGCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CCA 90 bp ACATTATCTACTCTGAACGCTTTTTCATCGAAATTCCCAAATAAAAGCAGAGCATCCAGGAAAGCATTCTaGTCCCAGGATGCAGACTGC +
Preference number: 2 (lower is better)
Translates to: TLSTLNAFSSKFPNKSRASRKAF*SQDADC
Trigger: GCAGTCTGCATCCTGGGACCAGAATGCTTTCCTGGA...TGCTCTGCTTTTATTTGGGAATTTCGATGAAAAAGCGTTCAGAGTAGATAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR GCA 90 bp ACATTATCTACTCTGAACGCTTTTTCATCGAAATTCCCAAATAAAAGCAGAGCAACACATCTTCAGGCGTaGCTGGAGCTTAGATCTGAC +
Preference number: 2 (lower is better)
Translates to: TLSTLNAFSSKFPNKSRATHLQA*LELRSD
Trigger: GTCAGATCTAAGCTCCAGGCACGCCTGAAGATGTGT...TGCTCTGCTTTTATTTGGGAATTTCGATGAAAAAGCGTTCAGAGTAGATAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CCA 90 bp ACATTATCTACTCTGAACGCTTTTTCATCGAAATTCCCAAATAAAAGCAGAGCATTGGTCCATTCCCATTaGTGCCTGGGCTTACGAAAC +
Preference number: 2 (lower is better)
Translates to: TLSTLNAFSSKFPNKSRALVHSH*CLGLRN
Trigger: GTTTCGTAAGCCCAGGCACCAATGGGAATGGACCAA...TGCTCTGCTTTTATTTGGGAATTTCGATGAAAAAGCGTTCAGAGTAGATAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR GCA 90 bp CTTTTGCTTGAGGCAAGGATTGGTTTCTTAAGATCTTACGACTCCTCCCTGAATTTTGAACATGTCGGTTaGATCCCAGAGTATAAAAAC +
Preference number: 2 (lower is better)
Translates to: LLLEARIGFLRSYDSSLNFEHVG*IPEYKN
Trigger: GTTTTTATACTCTGGGATGCAACCGACATGTTCAAA...ATTCAGGGAGGAGTCGTAAGATCTTAAGAAACCAATCCTTGCCTCAAGCAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CCA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTAACACTTGTGAAAATTaGCGCAAAATGAGTTGTACA +
Preference number: 2 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFNTCEN*RKMSCT
Trigger: TGTACAACTCATTTTGCGCCAATTTTCACAAGTGTT...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
3UTR-3UTR CCA 90 bp ACATTATCTACTCTGAACGCTTTTTCATCGAAATTCCCAAATAAAAGCAGAGCACTTTTCCTGAGGATCTaGGATTCTGTGGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: TLSTLNAFSSKFPNKSRALFLRI*DSVGER
Trigger: CCTTTCTCCCACAGAATCCCAGATCCTCAGGAAAAG...TGCTCTGCTTTTATTTGGGAATTTCGATGAAAAAGCGTTCAGAGTAGATAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CCA 90 bp TCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAACACTTGTGAAAATTaGCGCAAAATGAGTTGTACA +
Preference number: 2 (lower is better)
Translates to: SNIVGFQTFEHVGCIPEYNTCEN*RKMSCT
Trigger: TGTACAACTCATTTTGCGCCAATTTTCACAAGTGTT...ATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
3UTR CCA 72 bp CAGCCCGTGGCCCCCGGCCCCAGTGGTGGCCCACGCTaGACGGGCCCGCCGCCATTCCCAGGACCACTCGGC +
Preference number: 3 (lower is better)
Translates to: QPVAPGPSGGPR*TGPPPFPGPLG
Trigger: GCCGAGTGGTCCTGGGAATGGCGGCGGGCCCGTCCAGCGTGGGCCACCACTGGGGCCGGGGGCCACGGGCTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 72 bp CACGTTTGTGTCCTTCTCTGGAGGGCCCGCCCAGCATaGAGCCCGTGGCCCCCGGCCCCAGTGGTGGCCCAC +
Preference number: 3 (lower is better)
Translates to: HVCVLLWRARPA*SPWPPAPVVAH
Trigger: GTGGGCCACCACTGGGGCCGGGGGCCACGGGCTGCATGCTGGGCGGGCCCTCCAGAGAAGGACACAAACGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp GGGACCCCTGGGCTGCCGGCTCCAAAGGGCCGGTCTTaGCTCCCAACAGCAGCACGGTTCAGTCCCTGGAGG +
Preference number: 3 (lower is better)
Translates to: GTPGLPAPKGRS*LPTAARFSPWR
Trigger: CCTCCAGGGACTGAACCGTGCTGCTGTTGGGAGCCAAGACCGGCCCTTTGGAGCCGGCAGCCCAGGGGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp CCTTGGCCAGGAAAAGGCTCACCTTCCAGGAGAAGGTaGCGGAACCCACCCAGCACCACCTGCGGGCGGGCC +
Preference number: 3 (lower is better)
Translates to: PWPGKGSPSRRR*RNPPSTTCGRA
Trigger: GGCCCGCCCGCAGGTGGTGCTGGGTGGGTTCCGCCACCTTCTCCTGGAAGGTGAGCCTTTTCCTGGCCAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp GTGCCTGGGCTTACGAAACACGTTTGTGTCCTTCTCTaGAGGGCCCGCCCAGCATGCAGCCCGTGGCCCCCG +
Preference number: 3 (lower is better)
Translates to: VPGLTKHVCVLL*RARPACSPWPP
Trigger: CGGGGGCCACGGGCTGCATGCTGGGCGGGCCCTCCAGAGAAGGACACAAACGTGTTTCGTAAGCCCAGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 72 bp CAGCACCACCTGCGGGCGGGCCCCCGAGGAAGCCCATaGATTTCAGGATATTCACGCAGGATGGTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: QHHLRAGPRGSP*ISGYSRRMVAG
Trigger: CCCGGCCACCATCCTGCGTGAATATCCTGAAATTCATGGGCTTCCTCGGGGGCCCGCCCGCAGGTGGTGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 72 bp GGGCATCCTCAATTGTCCAGGGGCCTCTCGAGACGCTaGCCTGCTCTGGGGACGGTGGTGCCTGCCTATTGC +
Preference number: 3 (lower is better)
Translates to: GHPQLSRGLSRR*PALGTVVPAYC
Trigger: GCAATAGGCAGGCACCACCGTCCCCAGAGCAGGTCAGCGTCTCGAGAGGCCCCTGGACAATTGAGGATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 72 bp TTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCATGTaGTCGACGCCCATGGGGGAGAACCTCCTCAGCCTC +
Preference number: 3 (lower is better)
Translates to: FPGTLTPESPLM*STPMGENLLSL
Trigger: GAGGCTGAGGAGGTTCTCCCCCATGGGCGTCGATCACATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593807.1
3UTR TCA 72 bp AAATGCACCAGCCGGAGGAGGCGTTTCCTGGCACGTTaGCGCCAGAGAGCCCGCTCATGTGATCGACGCCCA +
Preference number: 3 (lower is better)
Translates to: KCTSRRRRFLAR*RQRARSCDRRP
Trigger: TGGGCGTCGATCACATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTGCATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593807.1
3UTR GCA 72 bp GCTTCTATTTCTCTGATCCAGCAGGGACCCCTGGGCTaGCGGCTCCAAAGGGCCGGTCTTGGCTCCCAACAG +
Preference number: 3 (lower is better)
Translates to: ASISLIQQGPLG*RLQRAGLGSQQ
Trigger: CTGTTGGGAGCCAAGACCGGCCCTTTGGAGCCGGCAGCCCAGGGGTCCCTGCTGGATCAGAGAAATAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 72 bp GGATCCCCTCGTCGGCATCCTGCCCCAGGTTGTAGATaGAAATGCACCAGCCGGAGGAGGCGTTTCCTGGCA +
Preference number: 3 (lower is better)
Translates to: GSPRRHPAPGCR*KCTSRRRRFLA
Trigger: TGCCAGGAAACGCCTCCTCCGGCTGGTGCATTTTCATCTACAACCTGGGGCAGGATGCCGACGAGGGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593807.1
3UTR CCA 72 bp GAGGAAGCCCATGAATTTCAGGATATTCACGCAGGATaGTGGCCGGGGAGGGGACTCAGCACCCGGGAGGGA +
Preference number: 3 (lower is better)
Translates to: EEAHEFQDIHAG*WPGRGLSTREG
Trigger: TCCCTCCCGGGTGCTGAGTCCCCTCCCCGGCCACCATCCTGCGTGAATATCCTGAAATTCATGGGCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 72 bp TCCTCAATTGTCCAGGGGCCTCTCGAGACGCTGACCTaGTCTGGGGACGGTGGTGCCTGCCTATTGCTCAAT +
Preference number: 3 (lower is better)
Translates to: SSIVQGPLETLT*SGDGGACLLLN
Trigger: ATTGAGCAATAGGCAGGCACCACCGTCCCCAGAGCAGGTCAGCGTCTCGAGAGGCCCCTGGACAATTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp GAAGCCCATGAATTTCAGGATATTCACGCAGGATGGTaGCCGGGGAGGGGACTCAGCACCCGGGAGGGAATC +
Preference number: 3 (lower is better)
Translates to: EAHEFQDIHAGW*PGRGLSTREGI
Trigger: GATTCCCTCCCGGGTGCTGAGTCCCCTCCCCGGCCACCATCCTGCGTGAATATCCTGAAATTCATGGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CAA 90 bp GGCCGGGGAGGGGACTCAGCACCCGGGAGGGAATCAGTCACAGAGCTGCGACTAAAAGGGATCTCCCCTTaGCAAACAGGCCTTGATAAG +
Preference number: 3 (lower is better)
Translates to: GRGGDSAPGRESVTELRLKGISP*QTGLDK
Trigger: CTTATCAAGGCCTGTTTGCAAAGGGGAGATCCCTTT...TAGTCGCAGCTCTGTGACTGATTCCCTCCCGGGTGCTGAGTCCCCTCCCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CAA 90 bp AACAGCAGCACGGTTCAGTCCCTGGAGGCTGGGTCTCCAGGACTAAGGCCAAGCGCTTACGAAACACGTTaGTGTCCTTCTCTGGAGGGC +
Preference number: 3 (lower is better)
Translates to: NSSTVQSLEAGSPGLRPSAYETR*CPSLEG
Trigger: GCCCTCCAGAGAAGGACACAAACGTGTTTCGTAAGC...GCTTGGCCTTAGTCCTGGAGACCCAGCCTCCAGGGACTGAACCGTGCTGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp AATTGTCCAGGGGCCTCTCGAGACGCTGACCTGCTCTaGGGACGGTGGTGCCTGCCTATTGCTCAATTTCAC +
Preference number: 3 (lower is better)
Translates to: NCPGASRDADLL*GRWCLPIAQFH
Trigger: GTGAAATTGAGCAATAGGCAGGCACCACCGTCCCCAGAGCAGGTCAGCGTCTCGAGAGGCCCCTGGACAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp GTAGATGAAAATGCACCAGCCGGAGGAGGCGTTTCCTaGCACGTTGACGCCAGAGAGCCCGCTCATGTGATC +
Preference number: 3 (lower is better)
Translates to: VDENAPAGGGVS*HVDAREPAHVI
Trigger: GATCACATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTGCATTTTCATCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593807.1
3UTR-3UTR CAA 90 bp TCGGGCAACAGAGCAGGGACCCTCTTTTGTGTCGAATCCGGGCAATGGGCCTCGTTTGGTCCATTCCCATaGGTGCCTGGGCTTACGAAA +
Preference number: 3 (lower is better)
Translates to: SGNRAGTLFCVESGQWASFGPFP*VPGLTK
Trigger: TTTCGTAAGCCCAGGCACCAATGGGAATGGACCAAA...CGAGGCCCATTGCCCGGATTCGACACAAAAGAGGGTCCCTGCTCTGTTGCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp GGGGCCTCTCGAGACGCTGACCTGCTCTGGGGACGGTaGTGCCTGCCTATTGCTCAATTTCACACTTCAATA +
Preference number: 3 (lower is better)
Translates to: GASRDADLLWGR*CLPIAQFHTSI
Trigger: TATTGAAGTGTGAAATTGAGCAATAGGCAGGCACCACCGTCCCCAGAGCAGGTCAGCGTCTCGAGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp GGATCTGGGATTCTGTGGGAGAAAGGAGGTCCTCTCTaGCACCAGGCCGACTTTTATGAGACACAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: GSGILWEKGGPL*HQADFYETQPG
Trigger: CCCAGGCTGTGTCTCATAAAAGTCGGCCTGGTGCCAGAGAGGACCTCCTTTCTCCCACAGAATCCCAGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CAA 90 bp TCGGGCAACAGAGCAGGGACCCTCTTTTGTGTCGAATCCGGGCAATGGGCCTCGGGTGGTGCCTGCCTATaGCTCAATTTCACACTTCAA +
Preference number: 3 (lower is better)
Translates to: SGNRAGTLFCVESGQWASGGACL*LNFTLQ
Trigger: TTGAAGTGTGAAATTGAGCAATAGGCAGGCACCACC...CGAGGCCCATTGCCCGGATTCGACACAAAAGAGGGTCCCTGCTCTGTTGCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 72 bp CGAATCCGGGCAATGGGCCTCGGTTTTGGCTTTTCCTaGGGATCTGGGATTCTGTGGGAGAAAGGAGGTCCT +
Preference number: 3 (lower is better)
Translates to: RIRAMGLGFGFS*GSGILWEKGGP
Trigger: AGGACCTCCTTTCTCCCACAGAATCCCAGATCCTCAGGAAAAGCCAAAACCGAGGCCCATTGCCCGGATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 72 bp AACCGGGTCAAGGAATTGCCACTAACCGTCTTCGGGTaGTTCTATTTCTCTGATCCAGCAGGGACCCCTGGG +
Preference number: 3 (lower is better)
Translates to: NRVKELPLTVFG*FYFSDPAGTPG
Trigger: CCCAGGGGTCCCTGCTGGATCAGAGAAATAGAAGCACCCGAAGACGGTTAGTGGCAATTCCTTGACCCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp GGCAATGGGCCTCGGTTTTGGCTTTTCCTGAGGATCTaGGATTCTGTGGGAGAAAGGAGGTCCTCTCTGGCA +
Preference number: 3 (lower is better)
Translates to: GNGPRFWLFLRI*DSVGERRSSLA
Trigger: TGCCAGAGAGGACCTCCTTTCTCCCACAGAATCCCAGATCCTCAGGAAAAGCCAAAACCGAGGCCCATTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 72 bp GAAAGGAGGTCCTCTCTGGCACCAGGCCGACTTTTATaGGACACAGCCTGGGTACGGATGGCAACATCATCA +
Preference number: 3 (lower is better)
Translates to: ERRSSLAPGRLL*DTAWVRMATSS
Trigger: TGATGATGTTGCCATCCGTACCCAGGCTGTGTCTCATAAAAGTCGGCCTGGTGCCAGAGAGGACCTCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp ACGCCAGATCCCAGTCCTGAGGAGTTTTGGGTGATCTaGCCCTGCCTATTTCACAGGCTTTCTCTTTCACCC +
Preference number: 3 (lower is better)
Translates to: TPDPSPEEFWVI*PCLFHRLSLSP
Trigger: GGGTGAAAGAGAAAGCCTGTGAAATAGGCAGGGCCAGATCACCCAAAACTCCTCAGGACTGGGATCTGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 72 bp GCCTCTCGAGACGCTGACCTGCTCTGGGGACGGTGGTaGCTGCCTATTGCTCAATTTCACACTTCAATAAAT +
Preference number: 3 (lower is better)
Translates to: ASRDADLLWGRW*LPIAQFHTSIN
Trigger: ATTTATTGAAGTGTGAAATTGAGCAATAGGCAGGCACCACCGTCCCCAGAGCAGGTCAGCGTCTCGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CAA 90 bp AGTGAGCAGGAGGTGGCAACGGGACCTGCCTGGAAAAGGAACTTCCTGTCAACCACATCGCTTACAATGTaGAAGCGGTTGAGAAAACGC +
Preference number: 3 (lower is better)
Translates to: SEQEVATGPAWKRNFLSTTSLTM*KRLRKR
Trigger: GCGTTTTCTCAACCGCTTCAACATTGTAAGCGATGT...GGTTGACAGGAAGTTCCTTTTCCAGGCAGGTCCCGTTGCCACCTCCTGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 72 bp GACACAGCCTGGGTACGGATGGCAACATCATCAATTTaGAAGGATCGCGCACACAGCCCCTCAGTAAAAGAT +
Preference number: 3 (lower is better)
Translates to: DTAWVRMATSSI*KDRAHSPSVKD
Trigger: ATCTTTTACTGAGGGGCTGTGTGCGCGATCCTTGCAAATTGATGATGTTGCCATCCGTACCCAGGCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp CAGGCCGACTTTTATGAGACACAGCCTGGGTACGGATaGCAACATCATCAATTTGCAAGGATCGCGCACACA +
Preference number: 3 (lower is better)
Translates to: QADFYETQPGYG*QHHQFARIAHT
Trigger: TGTGTGCGCGATCCTTGCAAATTGATGATGTTGCCATCCGTACCCAGGCTGTGTCTCATAAAAGTCGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp TTCATCAGGAAGCAGGTTCACAAATTCGGAGCTGCCTaGGGTCTAACTACCAGAGGAAGTTACACACGGGTC +
Preference number: 3 (lower is better)
Translates to: FIRKQVHKFGAA*GLTTRGSYTRV
Trigger: GACCCGTGTGTAACTTCCTCTGGTAGTTAGACCCCAGGCAGCTCCGAATTTGTGAACCTGCTTCCTGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 72 bp CTGATACCTGTAGAAAGAACTGAGTATCGGGACAATTaGGTCGTTGGAACTGTAAGCCACGCCCCAAACCGC +
Preference number: 3 (lower is better)
Translates to: LIPVERTEYRDN*VVGTVSHAPNR
Trigger: GCGGTTTGGGGCGTGGCTTACAGTTCCAACGACTCAATTGTCCCGATACTCAGTTCTTTCTACAGGTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 72 bp ACTCGGGATGTCAGAGTAGCAACACATCTTCAGGCGTaGCTGGAGCTTAGATCTGACTCTGGAATATACTGG +
Preference number: 3 (lower is better)
Translates to: TRDVRVATHLQA*LELRSDSGIYW
Trigger: CCAGTATATTCCAGAGTCAGATCTAAGCTCCAGGCACGCCTGAAGATGTGTTGCTACTCTGACATCCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 72 bp GTGAACAACAGTATCCAATGTGTGGGGCGCTGTGCATaGAATGTGTGGACAGAAACTCGGGATGTCAGAGTA +
Preference number: 3 (lower is better)
Translates to: VNNSIQCVGRCA*NVWTETRDVRV
Trigger: TACTCTGACATCCCGAGTTTCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 72 bp TATCGTGAACAACAGTATCCAATGTGTGGGGCGCTGTaGATGCAATGTGTGGACAGAAACTCGGGATGTCAG +
Preference number: 3 (lower is better)
Translates to: YREQQYPMCGAL*MQCVDRNSGCQ
Trigger: CTGACATCCCGAGTTTCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp TTCCCTGAAACTCTTTGGTCCATTCCCATTGGTGCCTaGGCTTACGAAACACGTTTGTGTCCTTCTCTGGAG +
Preference number: 3 (lower is better)
Translates to: FPETLWSIPIGA*AYETRLCPSLE
Trigger: CTCCAGAGAAGGACACAAACGTGTTTCGTAAGCCCAGGCACCAATGGGAATGGACCAAAGAGTTTCAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp AGTATCCAATGTGTGGGGCGCTGTGCATGCAATGTGTaGACAGAAACTCGGGATGTCAGAGTAGCAACACAT +
Preference number: 3 (lower is better)
Translates to: SIQCVGRCACNV*TETRDVRVATH
Trigger: ATGTGTTGCTACTCTGACATCCCGAGTTTCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 72 bp TATAAACGCCAGATCCCAGTCCTGAGGAGTTTTGGGTaGTCTGGCCCTGCCTATTTCACAGGCTTTCTCTTT +
Preference number: 3 (lower is better)
Translates to: YKRQIPVLRSFG*SGPAYFTGFLF
Trigger: AAAGAGAAAGCCTGTGAAATAGGCAGGGCCAGATCACCCAAAACTCCTCAGGACTGGGATCTGGCGTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 72 bp AGAATTCATCAGGAAGCAGGTTCACAAATTCGGAGCTaGCTGGGGTCTAACTACCAGAGGAAGTTACACACG +
Preference number: 3 (lower is better)
Translates to: RIHQEAGSQIRS*LGSNYQRKLHT
Trigger: CGTGTGTAACTTCCTCTGGTAGTTAGACCCCAGGCAGCTCCGAATTTGTGAACCTGCTTCCTGATGAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp AAAGCAAGTCACTGTAAACGGAACATCACATGGTCATaGTCAAAGAGGTGGCCCCAAACCAACGGAAAAGGC +
Preference number: 3 (lower is better)
Translates to: KASHCKRNITWS*SKRWPQTNGKG
Trigger: GCCTTTTCCGTTGGTTTGGGGCCACCTCTTTGACCATGACCATGTGATGTTCCGTTTACAGTGACTTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CAA 90 bp TCACATGGTCATGGTCAAAGAGGTGGCCCCAAACCAACGGAAAAGGCTTCTCTTCAGTCTGTGGAGACATaGAATGAAACGCGTGTTAGA +
Preference number: 3 (lower is better)
Translates to: SHGHGQRGGPKPTEKASLQSVET*NETRVR
Trigger: TCTAACACGCGTTTCATTCAATGTCTCCACAGACTG...AAGAGAAGCCTTTTCCGTTGGTTTGGGGCCACCTCTTTGACCATGACCATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 72 bp GCTGAGGTGCTACAAGCCCGTCATCATTTTCACAGTTaGAGCTTAAGACAGAGTTCTCTGTTGAATGCTAGC +
Preference number: 3 (lower is better)
Translates to: AEVLQARHHFHS*SLRQSSLLNAS
Trigger: GCTAGCATTCAACAGAGAACTCTGTCTTAAGCTTCAACTGTGAAAATGATGACGGGCTTGTAGCACCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
3UTR GCA 72 bp TCAGGGGAAATCAAAAAGGTTTGGAAATGTGAACCCTaGCTGGGATCCGAGATTCAGATTCTACTGCCATCA +
Preference number: 3 (lower is better)
Translates to: SGEIKKVWKCEP*LGSEIQILLPS
Trigger: TGATGGCAGTAGAATCTGAATCTCGGATCCCAGGCAGGGTTCACATTTCCAAACCTTTTTGATTTCCCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 72 bp TTAGAGGTCAGGGGAAATCAAAAAGGTTTGGAAATGTaGACCCTGCCTGGGATCCGAGATTCAGATTCTACT +
Preference number: 3 (lower is better)
Translates to: LEVRGNQKGLEM*TLPGIRDSDST
Trigger: AGTAGAATCTGAATCTCGGATCCCAGGCAGGGTTCACATTTCCAAACCTTTTTGATTTCCCCTGACCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp GATGTCAATTTCGATTTTTCAAGTCCGATGCCGGACTaGGTAAGTCATGTCTTTTCAATGCCTGGTGGACAA +
Preference number: 3 (lower is better)
Translates to: DVNFDFSSPMPD*VSHVFSMPGGQ
Trigger: TTGTCCACCAGGCATTGAAAAGACATGACTTACCCAGTCCGGCATCGGACTTGAAAAATCGAAATTGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp GGGAAATCAAAAAGGTTTGGAAATGTGAACCCTGCCTaGGATCCGAGATTCAGATTCTACTGCCATCATTAC +
Preference number: 3 (lower is better)
Translates to: GKSKRFGNVNPA*DPRFRFYCHHY
Trigger: GTAATGATGGCAGTAGAATCTGAATCTCGGATCCCAGGCAGGGTTCACATTTCCAAACCTTTTTGATTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR-3UTR CAA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTTGGGATTTCAAACATTaGAACATGTCGGTTGCATCC +
Preference number: 3 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFWDFKH*NMSVAS
Trigger: GGATGCAACCGACATGTTCAAATGTTTGAAATCCCA...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
3UTR-3UTR CAA 90 bp CATACAGCGTTTAACACGAACCTGATACCTGTAGAAAGAACTGAGTATCGGGACTTGATGGAACAGAGATaGCTTTTCAGGAGTGACAGT +
Preference number: 3 (lower is better)
Translates to: HTAFNTNLIPVERTEYRDLMEQR*LFRSDS
Trigger: ACTGTCACTCCTGAAAAGCAATCTCTGTTCCATCAA...GTCCCGATACTCAGTTCTTTCTACAGGTATCAGGTTCGTGTTAAACGCTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR TCA 72 bp TATGTTAAATGCTCTGGAAAACGGGAGAAATTATCGTaGACAACAGTATCCAATGTGTGGGGCGCTGTGCAT +
Preference number: 3 (lower is better)
Translates to: YVKCSGKREKLS*TTVSNVWGAVH
Trigger: ATGCACAGCGCCCCACACATTGGATACTGTTGTTCACGATAATTTCTCCCGTTTTCCAGAGCATTTAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CCA 72 bp AAAGCATGCTTCAGGTTCACCACCATCCAGAGGGACTaGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTT +
Preference number: 3 (lower is better)
Translates to: KACFRFTTIQRD*LVNAVLLRFLF
Trigger: AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCTGAAGCATGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
3UTR-3UTR CAA 90 bp AAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATAATTTGGGATTTCAAACATTaGAACATGTCGGTTGCATCC +
Preference number: 3 (lower is better)
Translates to: KGSYTSQFLLTCPSIRIIWDFKH*NMSVAS
Trigger: GGATGCAACCGACATGTTCAAATGTTTGAAATCCCA...AATTATTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR GCA 72 bp AACATTGTGGGATTTCAAACATTTGAACATGTCGGTTaGATCCCAGAGTATAAAAACCTTCTCACTTCTCAT +
Preference number: 3 (lower is better)
Translates to: NIVGFQTFEHVG*IPEYKNLLTSH
Trigger: ATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp GGAGAAGGTGGCGGAACCCACCCAGCACCACCTGCGGGCGGGCCCCCGAGGAAGGGCCTCTCGAGACGCTaGCCTGCTCTGGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: GEGGGTHPAPPAGGPPRKGLSRR*PALGTV
Trigger: CACCGTCCCCAGAGCAGGTCAGCGTCTCGAGAGGCC...CTTCCTCGGGGGCCCGCCCGCAGGTGGTGCTGGGTGGGTTCCGCCACCTTCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GGAGAAGGTGGCGGAACCCACCCAGCACCACCTGCGGGCGGGCCCCCGAGGAAGTCCAGCAGGGACCCCTaGGCTGCCGGCTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GEGGGTHPAPPAGGPPRKSSRDP*AAGSKG
Trigger: CCCTTTGGAGCCGGCAGCCCAGGGGTCCCTGCTGGA...CTTCCTCGGGGGCCCGCCCGCAGGTGGTGCTGGGTGGGTTCCGCCACCTTCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GGAGAAGGTGGCGGAACCCACCCAGCACCACCTGCGGGCGGGCCCCCGAGGAAGCCAAAGGGCCGGTCTTaGCTCCCAACAGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GEGGGTHPAPPAGGPPRKPKGRS*LPTAAR
Trigger: CCGTGCTGCTGTTGGGAGCCAAGACCGGCCCTTTGG...CTTCCTCGGGGGCCCGCCCGCAGGTGGTGCTGGGTGGGTTCCGCCACCTTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp AATGCACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGAGCCCGCTGAGAGCCCGCTCATGTaGTCGACGCCCATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: NAPAGGGVSWHVDAREPAESPLM*STPMGE
Trigger: CTCCCCCATGGGCGTCGATCACATGAGCGGGCTCTC...AGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTGCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR TCA 90 bp CCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCATGTGCGTTTCCTGGCACGTTaGCGCCAGAGAGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: PAGGGVSWHVDAREPAHVRFLAR*RQRARS
Trigger: TGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACG...CACATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR CCA 90 bp GGAGAAGGTGGCGGAACCCACCCAGCACCACCTGCGGGCGGGCCCCCGAGGAAGTATTTTTCAAAAATCTaGATGCGGGCGGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: GEGGGTHPAPPAGGPPRKYFSKI*MRAGGP
Trigger: GGGCCCGCCCGCCCGCATCCAGATTTTTGAAAAATA...CTTCCTCGGGGGCCCGCCCGCAGGTGGTGCTGGGTGGGTTCCGCCACCTTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GGCCGGGGAGGGGACTCAGCACCCGGGAGGGAATCAGTCACAGAGCTGCGACTACGTCGCGCTGGCGAGTaGTACAGCTGCGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GRGGDSAPGRESVTELRLRRAGE*YSCERS
Trigger: ACTCCTCTCGCAGCTGTACCACTCGCCAGCGCGACG...TAGTCGCAGCTCTGTGACTGATTCCCTCCCGGGTGCTGAGTCCCCTCCCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp GGCATGTGTGGGAGTGAGACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTCTCTGCGCCTGGTGGTaGACGGGGCCTCCGAACCGT +
Preference number: 4 (lower is better)
Translates to: GMCGSETPGGVSEAGIPPLCAWW*TGPPNR
Trigger: ACGGTTCGGAGGCCCCGTTCACCACCAGGCGCAGAG...AGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTCTCACTCCCACACATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp GGAGAAGGTGGCGGAACCCACCCAGCACCACCTGCGGGCGGGCCCCCGAGGAAGGGTTTTGGCTTTTCCTaGGGATCTGGGATTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GEGGGTHPAPPAGGPPRKGFGFS*GSGILW
Trigger: CCACAGAATCCCAGATCCTCAGGAAAAGCCAAAACC...CTTCCTCGGGGGCCCGCCCGCAGGTGGTGCTGGGTGGGTTCCGCCACCTTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp CCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCATGTGGGAGGAGGCGTTTCCTaGCACGTTGACGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: PAGGGVSWHVDAREPAHVGGGVS*HVDARE
Trigger: CTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCC...CACATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR TCA 90 bp GGCCGGGGAGGGGACTCAGCACCCGGGAGGGAATCAGTCACAGAGCTGCGACTAGCCAGATCCCAGTCCTaGGGAGTTTTGGGTGATCTG +
Preference number: 4 (lower is better)
Translates to: GRGGDSAPGRESVTELRLARSQS*GVLGDL
Trigger: CAGATCACCCAAAACTCCTCAGGACTGGGATCTGGC...TAGTCGCAGCTCTGTGACTGATTCCCTCCCGGGTGCTGAGTCCCCTCCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCATGTGATCTCTTCTACGTCCTTCTaGGTCATGGTCCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: AGGGVSWHVDAREPAHVISSTSF*VMVRGS
Trigger: GCTCCCGCGGACCATGACCCAGAAGGACGTAGAAGA...GATCACATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR TCA 90 bp AACAGCAGCACGGTTCAGTCCCTGGAGGCTGGGTCTCCAGGACTAAGGCCAAGCCTTACGACTCCTCCCTaGATGCTGGGCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: NSSTVQSLEAGSPGLRPSLTTPP*MLGHLH
Trigger: GTGCAGGTGGCCCAGCATTCAGGGAGGAGTCGTAAG...GCTTGGCCTTAGTCCTGGAGACCCAGCCTCCAGGGACTGAACCGTGCTGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp GGAGGCGTTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCATGTGATCGACGCCGGAATAACTGTAGTCTaGTCCACGAGGACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: GGVSWHVDAREPAHVIDAGITVV*STRTRE
Trigger: CTCGCGGGTCCTCGTGGATCAGACTACAGTTATTCC...GGCGTCGATCACATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR GCA 90 bp GACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTCCATCAGAAGGGTGTTCTCGAGACGCTGACCTaGTCTGGGGACGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: DSRGSFRSGNPAFHQKGVLETLT*SGDGGA
Trigger: GGCACCACCGTCCCCAGAGCAGGTCAGCGTCTCGAG...AACACCCTTCTGATGGAAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AGGGGATGGGCATCCTCAATTGTCCAGGGGCCTCTCGAGACGCTGACCTGCTCTGGAGGAGGCGTTTCCTaGCACGTTGACGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: RGWASSIVQGPLETLTCSGGGVS*HVDARE
Trigger: CTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCC...AGAGCAGGTCAGCGTCTCGAGAGGCCCCTGGACAATTGAGGATGCCCATCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GCATGTGTGGGAGTGAGACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTGCACGGTTCAGTCCCTaGAGGCTGGGTCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ACVGVRLQGEFQKRESRLARFSP*RLGLQD
Trigger: GTCCTGGAGACCCAGCCTCCAGGGACTGAACCGTGC...AAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTCTCACTCCCACACATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp AGTGAGCAGGAGGTGGCAACGGGACCTGCCTGGAAAAGGAACTTCCTGTCAACCCGTTTCCTGGCACGTTaGCGCCAGAGAGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: SEQEVATGPAWKRNFLSTRFLAR*RQRARS
Trigger: TGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACG...GGTTGACAGGAAGTTCCTTTTCCAGGCAGGTCCCGTTGCCACCTCCTGCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GGCATGTGTGGGAGTGAGACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTCTTCTACGTCCTTCTaGGTCATGGTCCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GMCGSETPGGVSEAGIPPSSTSF*VMVRGS
Trigger: GCTCCCGCGGACCATGACCCAGAAGGACGTAGAAGA...AGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTCTCACTCCCACACATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CCA 90 bp TCGGGCAACAGAGCAGGGACCCTCTTTTGTGTCGAATCCGGGCAATGGGCCTCGCTGCTCTGGGGACGGTaGTGCCTGCCTATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SGNRAGTLFCVESGQWASLLWGR*CLPIAQ
Trigger: TTGAGCAATAGGCAGGCACCACCGTCCCCAGAGCAG...CGAGGCCCATTGCCCGGATTCGACACAAAAGAGGGTCCCTGCTCTGTTGCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AAGCGCAGACTCTCAGAGGTTAAGGCAGCTGCCCTTGGCCAGGAAAAGGCTCACATTCACGCAGGATGGTaGCCGGGGAGGGGACTCAGC +
Preference number: 4 (lower is better)
Translates to: KRRLSEVKAAALGQEKAHIHAGW*PGRGLS
Trigger: GCTGAGTCCCCTCCCCGGCCACCATCCTGCGTGAAT...GTGAGCCTTTTCCTGGCCAAGGGCAGCTGCCTTAACCTCTGAGAGTCTGCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 72 bp CAGACTGCTCTCGGGCAACAGAGCAGGGACCCTCTTTaGTGTCGAATCCGGGCAATGGGCCTCGGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: QTALGQQSRDPL*CRIRAMGLGFG
Trigger: GCCAAAACCGAGGCCCATTGCCCGGATTCGACACAAAAGAGGGTCCCTGCTCTGTTGCCCGAGAGCAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp GTAGATGAAAATGCACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGATCCGCGGGAGCCCGCTaGTGTACAAGTTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: VDENAPAGGGVSWHVDARSAGAR*CTSWRL
Trigger: AAGACGCCAACTTGTACATCAGCGGGCTCCCGCGGA...TCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTGCATTTTCATCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR TCA 90 bp GACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTCCATCAGAAGGGTGTTCCATGGGGGAGAACCTaGATCTCTGCGCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: DSRGSFRSGNPAFHQKGVPWGRT*ISAPGG
Trigger: ACCACCAGGCGCAGAGATTCAGGTTCTCCCCCATGG...AACACCCTTCTGATGGAAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp CGACGCCCATGGGGGAGAACCTCCTCAGCCTCCTCAAACCAAAGCCAACGTCTTTCCCGATGTCACCCCTaGAGTCTTCGGCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: RRPWGRTSSASSNQSQRLSRCHP*SLRPCG
Trigger: ACCACATGGCCGAAGACTGCAGGGGTGACATCGGGA...AAGACGTTGGCTTTGGTTTGAGGAGGCTGAGGAGGTTCTCCCCCATGGGCGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR CCA 90 bp GTAGATGAAAATGCACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGATGTGATCGACGCCCATaGGGGAGAACCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VDENAPAGGGVSWHVDARCDRRP*GRTSSA
Trigger: GGCTGAGGAGGTTCTCCCCCATGGGCGTCGATCACA...TCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTGCATTTTCATCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR TCA 90 bp GCATGTGTGGGAGTGAGACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTGTCTTTGATCACCTCTaGGCTCGGGCGAGCATACGA +
Preference number: 4 (lower is better)
Translates to: ACVGVRLQGEFQKRESRLVFDHL*ARASIR
Trigger: TCGTATGCTCGCCCGAGCTCAGAGGTGATCAAAGAC...AAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTCTCACTCCCACACATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR TCA 90 bp ATCGACGCCCATGGGGGAGAACCTCCTCAGCCTCCTCAAACCAAAGCCAACGTCGTCTTTGATCACCTCTaGGCTCGGGCGAGCATACGA +
Preference number: 4 (lower is better)
Translates to: IDAHGGEPPQPPQTKANVVFDHL*ARASIR
Trigger: TCGTATGCTCGCCCGAGCTCAGAGGTGATCAAAGAC...GACGTTGGCTTTGGTTTGAGGAGGCTGAGGAGGTTCTCCCCCATGGGCGTCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR TCA 90 bp ATCGACGCCCATGGGGGAGAACCTCCTCAGCCTCCTCAAACCAAAGCCAACGTCACAAGTTGGCGTCTTTaGTCACCTCTGAGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: IDAHGGEPPQPPQTKANVTSWRL*SPLSSG
Trigger: GCCCGAGCTCAGAGGTGATCAAAGACGCCAACTTGT...GACGTTGGCTTTGGTTTGAGGAGGCTGAGGAGGTTCTCCCCCATGGGCGTCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR TCA 90 bp GTAGATGAAAATGCACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGCCCCAGGTTGTAGATaGAAATGCACCAGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: VDENAPAGGGVSWHVDARAPGCR*KCTSRR
Trigger: CCTCCGGCTGGTGCATTTTCATCTACAACCTGGGGC...TCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTGCATTTTCATCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR GCA 90 bp GTAGATGAAAATGCACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGAAACGGCCCAAACATCTaGCAGAGGATCCCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: VDENAPAGGGVSWHVDARNGPNI*QRIPSS
Trigger: CGACGAGGGGATCCTCTGGCAGATGTTTGGGCCGTT...TCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTGCATTTTCATCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR GCA 90 bp TCGGGCAACAGAGCAGGGACCCTCTTTTGTGTCGAATCCGGGCAATGGGCCTCGGAATGCTGGGCCACCTaGACCTTCCCTAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: SGNRAGTLFCVESGQWASECWAT*TFPSQK
Trigger: TTTTTGGCTAGGGAAGGTGCAGGTGGCCCAGCATTC...CGAGGCCCATTGCCCGGATTCGACACAAAAGAGGGTCCCTGCTCTGTTGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp CACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCATGGTCTTCTCATTTTGGTaGTGTCCTCGTTTGCGGAAT +
Preference number: 4 (lower is better)
Translates to: HQPEEAFPGTLTPESPLMVFSFW*CPRLRN
Trigger: ATTCCGCAAACGAGGACAGCACCAAAATGAGAAGAC...CATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR CCA 90 bp GCTAGAAGGCTGTTCAAACAGCGGAGACCACATACAATGAGAATGTTCCTGAACCCAGCATGCAGCCCGTaGCCCCCGGCCCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: ARRLFKQRRPHTMRMFLNPACSP*PPAPVV
Trigger: CACCACTGGGGCCGGGGGCCACGGGCTGCATGCTGG...GTTCAGGAACATTCTCATTGTATGTGGTCTCCGCTGTTTGAACAGCCTTCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AACAGCAGCACGGTTCAGTCCCTGGAGGCTGGGTCTCCAGGACTAAGGCCAAGCTCCAGGAAAGCATTCTaGTCCCAGGATGCAGACTGC +
Preference number: 4 (lower is better)
Translates to: NSSTVQSLEAGSPGLRPSSRKAF*SQDADC
Trigger: GCAGTCTGCATCCTGGGACCAGAATGCTTTCCTGGA...GCTTGGCCTTAGTCCTGGAGACCCAGCCTCCAGGGACTGAACCGTGCTGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 72 bp TCCATTCCCATTGGTGCCTGGGCTTACGAAACACGTTaGTGTCCTTCTCTGGAGGGCCCGCCCAGCATGCAG +
Preference number: 4 (lower is better)
Translates to: SIPIGAWAYETR*CPSLEGPPSMQ
Trigger: CTGCATGCTGGGCGGGCCCTCCAGAGAAGGACACAAACGTGTTTCGTAAGCCCAGGCACCAATGGGAATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp AGAGAGCCCGCTCATGTGATCGACGCCCATGGGGGAGAACCTCCTCAGCCTCCTTCTGAGGGAGGTAGTTaGCGATCAAATTCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: REPAHVIDAHGGEPPQPPSEGGS*RSNSFS
Trigger: GGAGAACGAATTTGATCGTCAACTACCTCCCTCAGA...AGGAGGCTGAGGAGGTTCTCCCCCATGGGCGTCGATCACATGAGCGGGCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR TCA 90 bp GACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTCCATCAGAAGGGTGTTACAAGTTGGCGTCTTTaGTCACCTCTGAGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: DSRGSFRSGNPAFHQKGVTSWRL*SPLSSG
Trigger: GCCCGAGCTCAGAGGTGATCAAAGACGCCAACTTGT...AACACCCTTCTGATGGAAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR TCA 90 bp AAGCGCAGACTCTCAGAGGTTAAGGCAGCTGCCCTTGGCCAGGAAAAGGCTCACGTGCTTCTATTTCTCTaGTCCAGCAGGGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: KRRLSEVKAAALGQEKAHVLLFL*SSRDPW
Trigger: CCAGGGGTCCCTGCTGGATCAGAGAAATAGAAGCAC...GTGAGCCTTTTCCTGGCCAAGGGCAGCTGCCTTAACCTCTGAGAGTCTGCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp GCATGTGTGGGAGTGAGACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTGTTGATCGCTCTCTCTaGATCCTTCGCGGTCACGTA +
Preference number: 4 (lower is better)
Translates to: ACVGVRLQGEFQKRESRLVDRSL*ILRGHV
Trigger: TACGTGACCGCGAAGGATGCAGAGAGAGCGATCAAC...AAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTCTCACTCCCACACATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp TCGGGCAACAGAGCAGGGACCCTCTTTTGTGTCGAATCCGGGCAATGGGCCTCGCAGCTGCGAGAGGAGTaGCACGTTTTTGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SGNRAGTLFCVESGQWASQLREE*HVFVLV
Trigger: AACCAGAACAAAAACGTGGCACTCCTCTCGCAGCTG...CGAGGCCCATTGCCCGGATTCGACACAAAAGAGGGTCCCTGCTCTGTTGCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp AGGGGATGGGCATCCTCAATTGTCCAGGGGCCTCTCGAGACGCTGACCTGCTCTACTTCAGGGCTGTCTTaGGAAGTTTGGGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: RGWASSIVQGPLETLTCSTSGLS*EVWGQE
Trigger: TTCCTGTCCCCAAACTTCGCAAGACAGCCCTGAAGT...AGAGCAGGTCAGCGTCTCGAGAGGCCCCTGGACAATTGAGGATGCCCATCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AAGCGCAGACTCTCAGAGGTTAAGGCAGCTGCCCTTGGCCAGGAAAAGGCTCACCTTCCTCCGGGCTCCTaGTTTAAAAGCCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: KRRLSEVKAAALGQEKAHLPPGS*FKSHQP
Trigger: AGGCTGGTGGCTTTTAAACCAGGAGCCCGGAGGAAG...GTGAGCCTTTTCCTGGCCAAGGGCAGCTGCCTTAACCTCTGAGAGTCTGCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AGAGAGCCCGCTCATGTGATCGACGCCCATGGGGGAGAACCTCCTCAGCCTCCTAACGTCTTCTCATTTTaGTGCTGTCCTCGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: REPAHVIDAHGGEPPQPPNVFSF*CCPRLR
Trigger: CCGCAAACGAGGACAGCACCAAAATGAGAAGACGTT...AGGAGGCTGAGGAGGTTCTCCCCCATGGGCGTCGATCACATGAGCGGGCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR GCA 90 bp GTAGATGAAAATGCACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGTTGATCGCTCTCTCTaGATCCTTCGCGGTCACGTA +
Preference number: 4 (lower is better)
Translates to: VDENAPAGGGVSWHVDARVDRSL*ILRGHV
Trigger: TACGTGACCGCGAAGGATGCAGAGAGAGCGATCAAC...TCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTGCATTTTCATCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR GCA 90 bp AGTGAGCAGGAGGTGGCAACGGGACCTGCCTGGAAAAGGAACTTCCTGTCAACCCTGGTTGGGGTTGGCTaGAAACTTCACTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: SEQEVATGPAWKRNFLSTLVGVG*KLHCDG
Trigger: CCCATCACAGTGAAGTTTGCAGCCAACCCCAACCAG...GGTTGACAGGAAGTTCCTTTTCCAGGCAGGTCCCGTTGCCACCTCCTGCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GTAGATGAAAATGCACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGATATTTTTCAAAAATCTaGATGCGGGCGGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: VDENAPAGGGVSWHVDARYFSKI*MRAGGP
Trigger: GGGCCCGCCCGCCCGCATCCAGATTTTTGAAAAATA...TCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTGCATTTTCATCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR TCA 90 bp CAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCGAGAGCCCGCTCATGTaGTCGACGCCCATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QGTFKGSYTSQFLLTCPSESPLM*STPMGE
Trigger: CTCCCCCATGGGCGTCGATCACATGAGCGGGCTCTC...GCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp TCGGGCAACAGAGCAGGGACCCTCTTTTGTGTCGAATCCGGGCAATGGGCCTCGGCTCACGAGAAGGGATaGGAGAAATACAATGCTCAA +
Preference number: 4 (lower is better)
Translates to: SGNRAGTLFCVESGQWASAHEKG*EKYNAQ
Trigger: TTGAGCATTGTATTTCTCGCATCCCTTCTCGTGAGC...CGAGGCCCATTGCCCGGATTCGACACAAAAGAGGGTCCCTGCTCTGTTGCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AAGCGCAGACTCTCAGAGGTTAAGGCAGCTGCCCTTGGCCAGGAAAAGGCTCACGGGCTCAGAGGAACCTaGGGGTTTATGACCATTGAA +
Preference number: 4 (lower is better)
Translates to: KRRLSEVKAAALGQEKAHGLRGT*GFMTIE
Trigger: TTCAATGGTCATAAACCCCCAGGTTCCTCTGAGCCC...GTGAGCCTTTTCCTGGCCAAGGGCAGCTGCCTTAACCTCTGAGAGTCTGCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AAGGAGGTCCTCTCTGGCACCAGGCCGACTTTTATGAGACACAGCCTGGGTACGGCCACGTTTTTGTTCTaGTTGGGGTTGGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: KEVLSGTRPTFMRHSLGTATFLF*LGLAAN
Trigger: GTTTGCAGCCAACCCCAACCAGAACAAAAACGTGGC...CGTACCCAGGCTGTGTCTCATAAAAGTCGGCCTGGTGCCAGAGAGGACCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp GTAGATGAAAATGCACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGACTTCACCAATGCTGCTaGACAGGCTTCGTAACTCAT +
Preference number: 4 (lower is better)
Translates to: VDENAPAGGGVSWHVDARLHQCC*TGFVTH
Trigger: ATGAGTTACGAAGCCTGTTCAGCAGCATTGGTGAAG...TCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTGCATTTTCATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR TCA 90 bp TCAGATAAAAGGGGGCGAGGAAAGAAGCTGAGGTGCTACAAGCCCGTCATCATTTGGGATTCTGTAGTCTaGTCCACGAGGACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: SDKRGRGKKLRCYKPVIIWDSVV*STRTRE
Trigger: CTCGCGGGTCCTCGTGGATCAGACTACAGAATCCCA...AATGATGACGGGCTTGTAGCACCTCAGCTTCTTTCCTCGCCCCCTTTTATCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596154.5
CDS-3UTR GCA 90 bp CGTGAACAACAGTATCCAATGTGTGGGGCGCTGTGCATGCAATGTGTGGACAGAGGTGGCAACGGGACCTaGCTGGAAAAGGAACTTCCT +
Preference number: 4 (lower is better)
Translates to: REQQYPMCGALCMQCVDRGGNGT*LEKELP
Trigger: AGGAAGTTCCTTTTCCAGGCAGGTCCCGTTGCCACC...TCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp GGCATGTGTGGGAGTGAGACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTATCCTTCCACAAGCTTaGAAGCTAAGACTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: GMCGSETPGGVSEAGIPPILPQA*KLRLPN
Trigger: ATTTGGGAGTCTTAGCTTGCAAGCTTGTGGAAGGAT...AGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTCTCACTCCCACACATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CCA 90 bp ATCGACGCCCATGGGGGAGAACCTCCTCAGCCTCCTCAAACCAAAGCCAACGTCTTAATGGTTTTTGACTaGAGCCTCAAGCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: IDAHGGEPPQPPQTKANVLMVFD*SLKPFS
Trigger: GCTGAACGGCTTGAGGCTCCAGTCAAAAACCATTAA...GACGTTGGCTTTGGTTTGAGGAGGCTGAGGAGGTTCTCCCCCATGGGCGTCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR TCA 90 bp GACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTCCATCAGAAGGGTGTTAAAAAGGCAATGGGCTaGTGGAAAACTGATAAGGGC +
Preference number: 4 (lower is better)
Translates to: DSRGSFRSGNPAFHQKGVKKAMG*WKTDKG
Trigger: GCCCTTATCAGTTTTCCATCAGCCCATTGCCTTTTT...AACACCCTTCTGATGGAAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp AAGGAGGTCCTCTCTGGCACCAGGCCGACTTTTATGAGACACAGCCTGGGTACGGTCATGTCTTTTCAATaGCTGGTGGACAAATGGCCT +
Preference number: 4 (lower is better)
Translates to: KEVLSGTRPTFMRHSLGTVMSFQ*LVDKWP
Trigger: AGGCCATTTGTCCACCAGGCATTGAAAAGACATGAC...CGTACCCAGGCTGTGTCTCATAAAAGTCGGCCTGGTGCCAGAGAGGACCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AGTGAGCAGGAGGTGGCAACGGGACCTGCCTGGAAAAGGAACTTCCTGTCAACCCGTTTTTGTTCTGGTTaGGGTTGGCTGCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: SEQEVATGPAWKRNFLSTRFCSG*GWLQTS
Trigger: TGAAGTTTGCAGCCAACCCCAACCAGAACAAAAACG...GGTTGACAGGAAGTTCCTTTTCCAGGCAGGTCCCGTTGCCACCTCCTGCTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AGTGAGCAGGAGGTGGCAACGGGACCTGCCTGGAAAAGGAACTTCCTGTCAACCACCATCCAGAGGGACTaGTTAGTCAATGCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: SEQEVATGPAWKRNFLSTTIQRD*LVNAVL
Trigger: TAGAACTGCATTGACTAACCAGTCCCTCTGGATGGT...GGTTGACAGGAAGTTCCTTTTCCAGGCAGGTCCCGTTGCCACCTCCTGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACAAAAGTGGTGGCCCACGCTaGACGGGCCCGCCGCCATTC +
Preference number: 4 (lower is better)
Translates to: GCIPEYKNLLTSHSDKDKSGGPR*TGPPPF
Trigger: GAATGGCGGCGGGCCCGTCCAGCGTGGGCCACCACT...TTTGTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GTCGGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACGACGCTGACCTGCTCTaGGGACGGTGGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VGCIPEYKNLLTSHSDKDDADLL*GRWCLP
Trigger: AGGCAGGCACCACCGTCCCCAGAGCAGGTCAGCGTC...GTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp CGTGAACAACAGTATCCAATGTGTGGGGCGCTGTGCATGCAATGTGTGGACAGAAAAGGTTTGGAAATGTaGACCCTGCCTGGGATCCGA +
Preference number: 4 (lower is better)
Translates to: REQQYPMCGALCMQCVDRKGLEM*TLPGIR
Trigger: TCGGATCCCAGGCAGGGTTCACATTTCCAAACCTTT...TCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp GACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTCCATCAGAAGGGTGTTTTAGAGGTTAAAGCATaGTTCAGGTTCACCACCATC +
Preference number: 4 (lower is better)
Translates to: DSRGSFRSGNPAFHQKGVLEVKA*FRFTTI
Trigger: GATGGTGGTGAACCTGAAGCATGCTTTAACCTCTAA...AACACCCTTCTGATGGAAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp ACATTATCTACTCTGAACGCTTTTTCATCGAAATTCCCAAATAAAAGCAGAGCACCACCCAGCACCACCTaGGGGCGGGCCCCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: TLSTLNAFSSKFPNKSRAPPSTT*GRAPEE
Trigger: TTCCTCGGGGGCCCGCCCGCAGGTGGTGCTGGGTGG...TGCTCTGCTTTTATTTGGGAATTTCGATGAAAAAGCGTTCAGAGTAGATAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp TATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATAATTGATAGGATTCAGGGACCCCTGGGCTaGCGGCTCCAAAGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: YTSQFLLTCPSIRIIDRIQGPLG*RLQRAG
Trigger: ACCGGCCCTTTGGAGCCGGCAGCCCAGGGGTCCCTG...AATCCTATCAATTATTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp TCGGGCAACAGAGCAGGGACCCTCTTTTGTGTCGAATCCGGGCAATGGGCCTCGAGATTCAGATTCTACTaGCATCATTACACGCCAATT +
Preference number: 4 (lower is better)
Translates to: SGNRAGTLFCVESGQWASRFRFY*HHYTPI
Trigger: AATTGGCGTGTAATGATGGCAGTAGAATCTGAATCT...CGAGGCCCATTGCCCGGATTCGACACAAAAGAGGGTCCCTGCTCTGTTGCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTTCCGAACCGTCGCGCTaGCGAGTGGTACAGCTGCGA +
Preference number: 4 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFSEPSR*RVVQLR
Trigger: TCGCAGCTGTACCACTCGCCAGCGCGACGGTTCGGA...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp CTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAACCTTCCAGGAGAAGGTaGCGGAACCCACCCAGCACC +
Preference number: 4 (lower is better)
Translates to: LSKAHILHSFFSPVPASEPSRRR*RNPPST
Trigger: GGTGCTGGGTGGGTTCCGCCACCTTCTCCTGGAAGG...TTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AAGGAGGTCCTCTCTGGCACCAGGCCGACTTTTATGAGACACAGCCTGGGTACGTGTCTTTTCAATGCCTaGTGGACAAATGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: KEVLSGTRPTFMRHSLGTCLFNA*WTNGLH
Trigger: ATGAAGGCCATTTGTCCACCAGGCATTGAAAAGACA...CGTACCCAGGCTGTGTCTCATAAAAGTCGGCCTGGTGCCAGAGAGGACCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 72 bp AGACACAGCCTGGGTACGGATGGCAACATCATCAATTaGCAAGGATCGCGCACACAGCCCCTCAGTAAAAGA +
Preference number: 4 (lower is better)
Translates to: RHSLGTDGNIIN*QGSRTQPLSKR
Trigger: TCTTTTACTGAGGGGCTGTGTGCGCGATCCTTGCAAATTGATGATGTTGCCATCCGTACCCAGGCTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp CTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATCCGCGGGAGCCCGCTaGTGTACAAGTTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: LSKAHILHSFFSPVPASESAGAR*CTSWRL
Trigger: AAGACGCCAACTTGTACATCAGCGGGCTCCCGCGGA...TTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR TCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAACTCTGCGCCTGGTGGTaGACGGGGCCTCCGAACCGT +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKLCAWW*TGPPNR
Trigger: ACGGTTCGGAGGCCCCGTTCACCACCAGGCGCAGAG...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp TGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAACCTTCGAGAGCCCGCTCATGTaGTCGACGCCCATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: WDFKHLNMSVASQSIKTFESPLM*STPMGE
Trigger: CTCCCCCATGGGCGTCGATCACATGAGCGGGCTCTC...GAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp GACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTCCATCAGAAGGGTGTTAGAATGTTCCTGAACTaGGAAACTTCAGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: DSRGSFRSGNPAFHQKGVRMFLN*ETSGNF
Trigger: AAAGTTCCCTGAAGTTTCTCAGTTCAGGAACATTCT...AACACCCTTCTGATGGAAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR TCA 90 bp GCATGTGTGGGAGTGAGACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTGAGAGCTTTGGAAACTaGATTAAAATGTCTACACAG +
Preference number: 4 (lower is better)
Translates to: ACVGVRLQGEFQKRESRLESFGN*IKMSTQ
Trigger: CTGTGTAGACATTTTAATTCAGTTTCCAAAGCTCTC...AAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTCTCACTCCCACACATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTTGCCCAGTGGACACCTaGGCACTCCTGCCACCACTA +
Preference number: 4 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFCPVDT*ALLPPL
Trigger: TAGTGGTGGCAGGAGTGCTCAGGTGTCCACTGGGCA...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596459.5
CDS-3UTR GCA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTTCCCGATGTCACCCCTaGAGTCTTCGGCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFSRCHP*SLRPCG
Trigger: ACCACATGGCCGAAGACTGCAGGGGTGACATCGGGA...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp CATACAGCGTTTAACACGAACCTGATACCTGTAGAAAGAACTGAGTATCGGGACGGCGAGTGGTACAGCTaGGAGAGGAGTGCCACGTTT +
Preference number: 4 (lower is better)
Translates to: HTAFNTNLIPVERTEYRDGEWYS*ERSATF
Trigger: AAACGTGGCACTCCTCTCGCAGCTGTACCACTCGCC...GTCCCGATACTCAGTTCTTTCTACAGGTATCAGGTTCGTGTTAAACGCTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTAACGGCCCAAACATCTaGCAGAGGATCCCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFNGPNI*QRIPSS
Trigger: CGACGAGGGGATCCTCTGGCAGATGTTTGGGCCGTT...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp CGTGAACAACAGTATCCAATGTGTGGGGCGCTGTGCATGCAATGTGTGGACAGAGCAACATCATCAATTTaGAAGGATCGCGCACACAGC +
Preference number: 4 (lower is better)
Translates to: REQQYPMCGALCMQCVDRATSSI*KDRAHS
Trigger: GCTGTGTGCGCGATCCTTGCAAATTGATGATGTTGC...TCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTTCTTCTACGTCCTTCTaGGTCATGGTCCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFSSTSF*VMVRGS
Trigger: GCTCCCGCGGACCATGACCCAGAAGGACGTAGAAGA...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp CGTGAACAACAGTATCCAATGTGTGGGGCGCTGTGCATGCAATGTGTGGACAGAATTCCCATTGGTGCCTaGGCTTACGAAACACGTTTG +
Preference number: 4 (lower is better)
Translates to: REQQYPMCGALCMQCVDRIPIGA*AYETRL
Trigger: CAAACGTGTTTCGTAAGCCCAGGCACCAATGGGAAT...TCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp CTTTTGCTTGAGGCAAGGATTGGTTTCTTAAGATCTTACGACTCCTCCCTGAATGATATTCACGCAGGATaGTGGCCGGGGAGGGGACTC +
Preference number: 4 (lower is better)
Translates to: LLLEARIGFLRSYDSSLNDIHAG*WPGRGL
Trigger: GAGTCCCCTCCCCGGCCACCATCCTGCGTGAATATC...ATTCAGGGAGGAGTCGTAAGATCTTAAGAAACCAATCCTTGCCTCAAGCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp GTCGGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACGACAAACCTGTAGTCTaGTCCACGAGGACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: VGCIPEYKNLLTSHSDKDDKPVV*STRTRE
Trigger: CTCGCGGGTCCTCGTGGATCAGACTACAGGTTTGTC...GTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp CGTGAACAACAGTATCCAATGTGTGGGGCGCTGTGCATGCAATGTGTGGACAGAGGGATTTCAAACATTTaGACATGTCGGTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: REQQYPMCGALCMQCVDRGISNI*TCRLHP
Trigger: GGGATGCAACCGACATGTTCAAATGTTTGAAATCCC...TCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp CTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAAGGCGAGGAAAGAAGCTaGGGTGCTACAAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: LSKAHILHSFFSPVPASEGEERS*GATSPS
Trigger: TGACGGGCTTGTAGCACCTCAGCTTCTTTCCTCGCC...TTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR TCA 90 bp AAGCGCAGACTCTCAGAGGTTAAGGCAGCTGCCCTTGGCCAGGAAAAGGCTCACCTTGGCAAATTACACTaGAAACGAAATAATGGCAGA +
Preference number: 4 (lower is better)
Translates to: KRRLSEVKAAALGQEKAHLGKLH*KRNNGR
Trigger: TCTGCCATTATTTCGTTTTCAGTGTAATTTGCCAAG...GTGAGCCTTTTCCTGGCCAAGGGCAGCTGCCTTAACCTCTGAGAGTCTGCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp CAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCCCCCGAGGAAGCCCATaGATTTCAGGATATTCACGC +
Preference number: 4 (lower is better)
Translates to: QGTFKGSYTSQFLLTCPSPRGSP*ISGYSR
Trigger: GCGTGAATATCCTGAAATTCATGGGCTTCCTCGGGG...GCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp ATCGACGCCCATGGGGGAGAACCTCCTCAGCCTCCTCAAACCAAAGCCAACGTCATCCCGAATAAGTTTTaGAGATTCAACTTCACCAAT +
Preference number: 4 (lower is better)
Translates to: IDAHGGEPPQPPQTKANVIPNKF*RFNFTN
Trigger: ATTGGTGAAGTTGAATCTGCAAAACTTATTCGGGAT...GACGTTGGCTTTGGTTTGAGGAGGCTGAGGAGGTTCTCCCCCATGGGCGTCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR GCA 90 bp TCAGATAAAAGGGGGCGAGGAAAGAAGCTGAGGTGCTACAAGCCCGTCATCATTATTGAAACTGGTAATTaGCTCTTCTGCCTCCGACCG +
Preference number: 4 (lower is better)
Translates to: SDKRGRGKKLRCYKPVIIIETGN*LFCLRP
Trigger: CGGTCGGAGGCAGAAGAGGCAATTACCAGTTTCAAT...AATGATGACGGGCTTGTAGCACCTCAGCTTCTTTCCTCGCCCCCTTTTATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp AGTGAGCAGGAGGTGGCAACGGGACCTGCCTGGAAAAGGAACTTCCTGTCAACCTTTGAACATGTCGGTTaGATCCCAGAGTATAAAAAC +
Preference number: 4 (lower is better)
Translates to: SEQEVATGPAWKRNFLSTFEHVG*IPEYKN
Trigger: GTTTTTATACTCTGGGATGCAACCGACATGTTCAAA...GGTTGACAGGAAGTTCCTTTTCCAGGCAGGTCCCGTTGCCACCTCCTGCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp CAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCGGGGACGGTGGTGCCTaGCTATTGCTCAATTTCACA +
Preference number: 4 (lower is better)
Translates to: QGTFKGSYTSQFLLTCPSGDGGA*LLLNFT
Trigger: TGTGAAATTGAGCAATAGGCAGGCACCACCGTCCCC...GCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp AGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCAATTCTGGTCCCAGGATaGAGACTGCTCTCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: RELSKAHILHSFFSPVPAILVPG*RLLSGN
Trigger: GTTGCCCGAGAGCAGTCTGCATCCTGGGACCAGAAT...TGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR GCA 90 bp TCAGATAAAAGGGGGCGAGGAAAGAAGCTGAGGTGCTACAAGCCCGTCATCATTGGAAAGAAGCTGAGGTaGTACAAGCCCGTCATCATT +
Preference number: 4 (lower is better)
Translates to: SDKRGRGKKLRCYKPVIIGKKLR*YKPVII
Trigger: AATGATGACGGGCTTGTAGCACCTCAGCTTCTTTCC...AATGATGACGGGCTTGTAGCACCTCAGCTTCTTTCCTCGCCCCCTTTTATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CCA 90 bp GGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACAAACGTCGCGCTGGCGAGTaGTACAGCTGCGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GCIPEYKNLLTSHSDKDKRRAGE*YSCERS
Trigger: ACTCCTCTCGCAGCTGTACCACTCGCCAGCGCGACG...TTTGTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp CATACAGCGTTTAACACGAACCTGATACCTGTAGAAAGAACTGAGTATCGGGACGGAAAGGGGAGGGGATaGGCATCCTCAATTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HTAFNTNLIPVERTEYRDGKGRG*ASSIVQ
Trigger: CTGGACAATTGAGGATGCCCATCCCCTCCCCTTTCC...GTCCCGATACTCAGTTCTTTCTACAGGTATCAGGTTCGTGTTAAACGCTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp TCACATGGTCATGGTCAAAGAGGTGGCCCCAAACCAACGGAAAAGGCTTCTCTTCTTTTCCTGAGGATCTaGGATTCTGTGGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SHGHGQRGGPKPTEKASLLFLRI*DSVGER
Trigger: CCTTTCTCCCACAGAATCCCAGATCCTCAGGAAAAG...AAGAGAAGCCTTTTCCGTTGGTTTGGGGCCACCTCTTTGACCATGACCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GCTAGAAGGCTGTTCAAACAGCGGAGACCACATACAATGAGAATGTTCCTGAACGTCGAATCCGGGCAATaGGCCTCGGTTTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: ARRLFKQRRPHTMRMFLNVESGQ*ASVLAF
Trigger: AAAAGCCAAAACCGAGGCCCATTGCCCGGATTCGAC...GTTCAGGAACATTCTCATTGTATGTGGTCTCCGCTGTTTGAACAGCCTTCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CCA 90 bp CAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCTCCAGGAAAGCATTCTaGTCCCAGGATGCAGACTGC +
Preference number: 4 (lower is better)
Translates to: QGTFKGSYTSQFLLTCPSSRKAF*SQDADC
Trigger: GCAGTCTGCATCCTGGGACCAGAATGCTTTCCTGGA...GCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CCA 90 bp GCAAATTACACTGAAAACGAAATAATGGCAGAGCCAAGGGGGAACAAGGGAGAACTGTCTTGCGAAGTTTaGGGACAGGAACCCCTGACC +
Preference number: 4 (lower is better)
Translates to: ANYTENEIMAEPRGNKGELSCEV*GQEPLT
Trigger: GGTCAGGGGTTCCTGTCCCCAAACTTCGCAAGACAG...TTCTCCCTTGTTCCCCCTTGGCTCTGCCATTATTTCGTTTTCAGTGTAATTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp TCACATGGTCATGGTCAAAGAGGTGGCCCCAAACCAACGGAAAAGGCTTCTCTTAACATCACATGGTCATaGTCAAAGAGGTGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SHGHGQRGGPKPTEKASLNITWS*SKRWPQ
Trigger: TTGGGGCCACCTCTTTGACCATGACCATGTGATGTT...AAGAGAAGCCTTTTCCGTTGGTTTGGGGCCACCTCTTTGACCATGACCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 72 bp ACTGGAGTTTCCCTGAAACTCTTTGGTCCATTCCCATaGGTGCCTGGGCTTACGAAACACGTTTGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: TGVSLKLFGPFP*VPGLTKHVCVL
Trigger: AAGGACACAAACGTGTTTCGTAAGCCCAGGCACCAATGGGAATGGACCAAAGAGTTTCAGGGAAACTCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp TCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATTCCGCGGGAGCCCGCTaGTGTACAAGTTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: SNIVGFQTFEHVGCIPEYSAGAR*CTSWRL
Trigger: AAGACGCCAACTTGTACATCAGCGGGCTCCCGCGGA...ATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp CGTGAACAACAGTATCCAATGTGTGGGGCGCTGTGCATGCAATGTGTGGACAGAGAACCTGGGGGTTTATaGCCATTGAAACTGGTAATT +
Preference number: 4 (lower is better)
Translates to: REQQYPMCGALCMQCVDREPGGL*PLKLVI
Trigger: AATTACCAGTTTCAATGGTCATAAACCCCCAGGTTC...TCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGCAAACTTCACTGTaGTGGGCTCAGAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFLQTSL*WAQRNL
Trigger: CAGGTTCCTCTGAGCCCATCACAGTGAAGTTTGCAG...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp CTTAAGATTGGTCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCACGTTTCCTGGCACGTTaGCGCCAGAGAGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: LKIGLTLWDFKHLNMSVARFLAR*RQRARS
Trigger: TGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACG...TGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGACCAATCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp GCTAGAAGGCTGTTCAAACAGCGGAGACCACATACAATGAGAATGTTCCTGAACACACATCTTCAGGCGTaGCTGGAGCTTAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: ARRLFKQRRPHTMRMFLNTHLQA*LELRSD
Trigger: GTCAGATCTAAGCTCCAGGCACGCCTGAAGATGTGT...GTTCAGGAACATTCTCATTGTATGTGGTCTCCGCTGTTTGAACAGCCTTCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp CTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAAATTCTGGTCCCAGGATaGAGACTGCTCTCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: LSKAHILHSFFSPVPASEILVPG*RLLSGN
Trigger: GTTGCCCGAGAGCAGTCTGCATCCTGGGACCAGAAT...TTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR GCA 90 bp TCACATGGTCATGGTCAAAGAGGTGGCCCCAAACCAACGGAAAAGGCTTCTCTTCTAACCGTCTTCGGGTaGTTCTATTTCTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: SHGHGQRGGPKPTEKASLLTVFG*FYFSDP
Trigger: TGGATCAGAGAAATAGAAGCACCCGAAGACGGTTAG...AAGAGAAGCCTTTTCCGTTGGTTTGGGGCCACCTCTTTGACCATGACCATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAATCCGAACCGTCGCGCTaGCGAGTGGTACAGCTGCGA +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKSEPSR*RVVQLR
Trigger: TCGCAGCTGTACCACTCGCCAGCGCGACGGTTCGGA...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp AAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATAATTGTTTGTGTCCTTCTCTaGAGGGCCCGCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: KGSYTSQFLLTCPSIRIIVCVLL*RARPAC
Trigger: GCATGCTGGGCGGGCCCTCCAGAGAAGGACACAAAC...AATTATTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GCAAATTACACTGAAAACGAAATAATGGCAGAGCCAAGGGGGAACAAGGGAGAAGGACAATTGAGTCGTTaGAACTGTAAGCCACGCCCC +
Preference number: 4 (lower is better)
Translates to: ANYTENEIMAEPRGNKGEGQLSR*NCKPRP
Trigger: GGGGCGTGGCTTACAGTTCCAACGACTCAATTGTCC...TTCTCCCTTGTTCCCCCTTGGCTCTGCCATTATTTCGTTTTCAGTGTAATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp TGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAACCTTCAAGCCCTCTGCCCAGTaGACACCTGAGCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: WDFKHLNMSVASQSIKTFKPSAQ*TPEHSC
Trigger: GCAGGAGTGCTCAGGTGTCCACTGGGCAGAGGGCTT...GAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596459.5
CDS-3UTR TCA 90 bp GCTAGAAGGCTGTTCAAACAGCGGAGACCACATACAATGAGAATGTTCCTGAACCTTCACCAATGCTGCTaGACAGGCTTCGTAACTCAT +
Preference number: 4 (lower is better)
Translates to: ARRLFKQRRPHTMRMFLNLHQCC*TGFVTH
Trigger: ATGAGTTACGAAGCCTGTTCAGCAGCATTGGTGAAG...GTTCAGGAACATTCTCATTGTATGTGGTCTCCGCTGTTTGAACAGCCTTCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp AACTTCAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCGTCTTTGATCACCTCTaGGCTCGGGCGAGCATACGA +
Preference number: 4 (lower is better)
Translates to: NFRELSKAHILHSFFSPVVFDHL*ARASIR
Trigger: TCGTATGCTCGCCCGAGCTCAGAGGTGATCAAAGAC...GACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR TCA 90 bp CAGACAAAGACAAACACTTGTGAAAATTGGCGCAAAATGAGTTGTACACTAACATCCGCGGGAGCCCGCTaGTGTACAAGTTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: QTKTNTCENWRKMSCTLTSAGAR*CTSWRL
Trigger: AAGACGCCAACTTGTACATCAGCGGGCTCCCGCGGA...TGTTAGTGTACAACTCATTTTGCGCCAATTTTCACAAGTGTTTGTCTTTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp TGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAACCTTCGACAAACCTGTAGTCTaGTCCACGAGGACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: WDFKHLNMSVASQSIKTFDKPVV*STRTRE
Trigger: CTCGCGGGTCCTCGTGGATCAGACTACAGGTTTGTC...GAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAACCATGGGGGAGAACCTaGATCTCTGCGCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKPWGRT*ISAPGG
Trigger: ACCACCAGGCGCAGAGATTCAGGTTCTCCCCCATGG...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp TCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATTCCCGATGTCACCCCTaGAGTCTTCGGCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: SNIVGFQTFEHVGCIPEYSRCHP*SLRPCG
Trigger: ACCACATGGCCGAAGACTGCAGGGGTGACATCGGGA...ATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp GTCGGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACGTTGATCGCTCTCTCTaGATCCTTCGCGGTCACGTA +
Preference number: 4 (lower is better)
Translates to: VGCIPEYKNLLTSHSDKDVDRSL*ILRGHV
Trigger: TACGTGACCGCGAAGGATGCAGAGAGAGCGATCAAC...GTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp TCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATGGCGAGTGGTACAGCTaGGAGAGGAGTGCCACGTTT +
Preference number: 4 (lower is better)
Translates to: SNIVGFQTFEHVGCIPEYGEWYS*ERSATF
Trigger: AAACGTGGCACTCCTCTCGCAGCTGTACCACTCGCC...ATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp CGTGAACAACAGTATCCAATGTGTGGGGCGCTGTGCATGCAATGTGTGGACAGAGTAACTGCACATTCTTaGGTCACAGATTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: REQQYPMCGALCMQCVDRVTAHS*VTDSEM
Trigger: CATTTCTGAATCTGTGACGCAAGAATGTGCAGTTAC...TCTGTCCACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp GTCGGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACCTCTGGGGACGGTGGTaGCTGCCTATTGCTCAATTT +
Preference number: 4 (lower is better)
Translates to: VGCIPEYKNLLTSHSDKDLWGRW*LPIAQF
Trigger: AAATTGAGCAATAGGCAGGCACCACCGTCCCCAGAG...GTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp AAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATAATTTCCCAGGATGCAGACTaGTCTCGGGCAACAGAGCAG +
Preference number: 4 (lower is better)
Translates to: KGSYTSQFLLTCPSIRIISQDAD*SRATEQ
Trigger: CTGCTCTGTTGCCCGAGAGCAGTCTGCATCCTGGGA...AATTATTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR GCA 90 bp GTCGGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACATGTTCTCTGAACACTaGGATGTTCCCACCTCCGGG +
Preference number: 4 (lower is better)
Translates to: VGCIPEYKNLLTSHSDKDMFSEH*DVPTSG
Trigger: CCCGGAGGTGGGAACATCGCAGTGTTCAGAGAACAT...GTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596459.5
CDS-3UTR CCA 90 bp GGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACAAATCTTCTACGTCCTTCTaGGTCATGGTCCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GCIPEYKNLLTSHSDKDKSSTSF*VMVRGS
Trigger: GCTCCCGCGGACCATGACCCAGAAGGACGTAGAAGA...TTTGTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTGGGCTCAGAGGAACCTaGGGGTTTATGACCATTGAA +
Preference number: 4 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFGLRGT*GFMTIE
Trigger: TTCAATGGTCATAAACCCCCAGGTTCCTCTGAGCCC...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp CTTAAGATTGGTCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCAGGAGGAGGCGTTTCCTaGCACGTTGACGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LKIGLTLWDFKHLNMSVAGGGVS*HVDARE
Trigger: CTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCC...TGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGACCAATCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTTTGGTCCATTCCCATTaGTGCCTGGGCTTACGAAAC +
Preference number: 4 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFLVHSH*CLGLRN
Trigger: GTTTCGTAAGCCCAGGCACCAATGGGAATGGACCAA...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp CAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCTTCCCTGAAACTCTTTaGTCCATTCCCATTGGTGCC +
Preference number: 4 (lower is better)
Translates to: QGTFKGSYTSQFLLTCPSFPETL*SIPIGA
Trigger: GGCACCAATGGGAATGGACCAAAGAGTTTCAGGGAA...GCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp CTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAAGTCGAATCCGGGCAATaGGCCTCGGTTTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: LSKAHILHSFFSPVPASEVESGQ*ASVLAF
Trigger: AAAAGCCAAAACCGAGGCCCATTGCCCGGATTCGAC...TTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CCA 90 bp GCTAGAAGGCTGTTCAAACAGCGGAGACCACATACAATGAGAATGTTCCTGAACTCATGGTCAAAGAGGTaGCCCCAAACCAACGGAAAA +
Preference number: 4 (lower is better)
Translates to: ARRLFKQRRPHTMRMFLNSWSKR*PQTNGK
Trigger: TTTTCCGTTGGTTTGGGGCCACCTCTTTGACCATGA...GTTCAGGAACATTCTCATTGTATGTGGTCTCCGCTGTTTGAACAGCCTTCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 72 bp AATGGCCTTCATTTGGAAGCAAACCGGGTCAAGGAATaGCCACTAACCGTCTTCGGGTGCTTCTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: NGLHLEANRVKE*PLTVFGCFYFS
Trigger: AGAGAAATAGAAGCACCCGAAGACGGTTAGTGGCAATTCCTTGACCCGGTTTGCTTCCAAATGAAGGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 72 bp TGTCTTTTCAATGCCTGGTGGACAAATGGCCTTCATTaGGAAGCAAACCGGGTCAAGGAATTGCCACTAACC +
Preference number: 4 (lower is better)
Translates to: CLFNAWWTNGLH*EANRVKELPLT
Trigger: GGTTAGTGGCAATTCCTTGACCCGGTTTGCTTCCAAATGAAGGCCATTTGTCCACCAGGCATTGAAAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp TCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATACAAGTTGGCGTCTTTaGTCACCTCTGAGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SNIVGFQTFEHVGCIPEYTSWRL*SPLSSG
Trigger: GCCCGAGCTCAGAGGTGATCAAAGACGCCAACTTGT...ATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAGCCCCAGGTTGTAGATaGAAATGCACCAGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKAPGCR*KCTSRR
Trigger: CCTCCGGCTGGTGCATTTTCATCTACAACCTGGGGC...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp CTTAAGATTGGTCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCAGCCCCAGGTTGTAGATaGAAATGCACCAGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LKIGLTLWDFKHLNMSVAAPGCR*KCTSRR
Trigger: CCTCCGGCTGGTGCATTTTCATCTACAACCTGGGGC...TGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGACCAATCTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAACCAGGCCGACTTTTATaGGACACAGCCTGGGTACGG +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKPGRLL*DTAWVR
Trigger: CCGTACCCAGGCTGTGTCTCATAAAAGTCGGCCTGG...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAGGCGAGGAAAGAAGCTaGGGTGCTACAAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKGEERS*GATSPS
Trigger: TGACGGGCTTGTAGCACCTCAGCTTCTTTCCTCGCC...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp CTTAAGATTGGTCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCAAACGGCCCAAACATCTaGCAGAGGATCCCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: LKIGLTLWDFKHLNMSVANGPNI*QRIPSS
Trigger: CGACGAGGGGATCCTCTGGCAGATGTTTGGGCCGTT...TGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGACCAATCTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp GCAAATTACACTGAAAACGAAATAATGGCAGAGCCAAGGGGGAACAAGGGAGAAGGAAAGAAGCTGAGGTaGTACAAGCCCGTCATCATT +
Preference number: 4 (lower is better)
Translates to: ANYTENEIMAEPRGNKGEGKKLR*YKPVII
Trigger: AATGATGACGGGCTTGTAGCACCTCAGCTTCTTTCC...TTCTCCCTTGTTCCCCCTTGGCTCTGCCATTATTTCGTTTTCAGTGTAATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTTGGAAATGTGAACCCTaGCTGGGATCCGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFWKCEP*LGSEIQ
Trigger: CTGAATCTCGGATCCCAGGCAGGGTTCACATTTCCA...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp GGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACAAAACACCTGAGCACTCCTaGCACCACTACCCATCTCAG +
Preference number: 4 (lower is better)
Translates to: GCIPEYKNLLTSHSDKDKTPEHS*HHYPSQ
Trigger: CTGAGATGGGTAGTGGTGGCAGGAGTGCTCAGGTGT...TTTGTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596459.5
CDS-3UTR CCA 90 bp GTCGGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACACAGTATCCAATGTGTaGGGCGCTGTGCATGCAATG +
Preference number: 4 (lower is better)
Translates to: VGCIPEYKNLLTSHSDKDTVSNV*GAVHAM
Trigger: CATTGCATGCACAGCGCCCCACACATTGGATACTGT...GTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTGAGTTTTGGGTGATCTaGCCCTGCCTATTTCACAGG +
Preference number: 4 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFEFWVI*PCLFHR
Trigger: CCTGTGAAATAGGCAGGGCCAGATCACCCAAAACTC...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTAAAGGAGGTCCTCTCTaGCACCAGGCCGACTTTTAT +
Preference number: 4 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFKGGPL*HQADFY
Trigger: ATAAAAGTCGGCCTGGTGCCAGAGAGGACCTCCTTT...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTAATGGGCCTCGGTTTTaGCTTTTCCTGAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFNGPRF*LFLRIW
Trigger: CCAGATCCTCAGGAAAAGCCAAAACCGAGGCCCATT...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp CTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAAAATGGGCCTCGGTTTTaGCTTTTCCTGAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: LSKAHILHSFFSPVPASENGPRF*LFLRIW
Trigger: CCAGATCCTCAGGAAAAGCCAAAACCGAGGCCCATT...TTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CCA 90 bp AGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCACAAATGGCCTTCATTTaGAAGCAAACCGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: RELSKAHILHSFFSPVPAQMAFI*KQTGSR
Trigger: CCTTGACCCGGTTTGCTTCCAAATGAAGGCCATTTG...TGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTTCTGAGGGAGGTAGTTaGCGATCAAATTCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFSEGGS*RSNSFS
Trigger: GGAGAACGAATTTGATCGTCAACTACCTCCCTCAGA...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAGTCTTTGATCACCTCTaGGCTCGGGCGAGCATACGA +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKVFDHL*ARASIR
Trigger: TCGTATGCTCGCCCGAGCTCAGAGGTGATCAAAGAC...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAACAAGTTGGCGTCTTTaGTCACCTCTGAGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKTSWRL*SPLSSG
Trigger: GCCCGAGCTCAGAGGTGATCAAAGACGCCAACTTGT...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp GTCGGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACGACAGAGTTCTCTGTTaGATGCTAGCTATGGGCATG +
Preference number: 4 (lower is better)
Translates to: VGCIPEYKNLLTSHSDKDDRVLC*MLAMGM
Trigger: CATGCCCATAGCTAGCATTCAACAGAGAACTCTGTC...GTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp CTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAAGACAGAGTTCTCTGTTaGATGCTAGCTATGGGCATG +
Preference number: 4 (lower is better)
Translates to: LSKAHILHSFFSPVPASEDRVLC*MLAMGM
Trigger: CATGCCCATAGCTAGCATTCAACAGAGAACTCTGTC...TTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR GCA 90 bp TGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAACCTTCCTGGTTGGGGTTGGCTaGAAACTTCACTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: WDFKHLNMSVASQSIKTFLVGVG*KLHCDG
Trigger: CCCATCACAGTGAAGTTTGCAGCCAACCCCAACCAG...GAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp TCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATGTGGGGCGCTGTGCATaGAATGTGTGGACAGAAACT +
Preference number: 4 (lower is better)
Translates to: SNIVGFQTFEHVGCIPEYVGRCA*NVWTET
Trigger: AGTTTCTGTCCACACATTGCATGCACAGCGCCCCAC...ATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp ACATTATCTACTCTGAACGCTTTTTCATCGAAATTCCCAAATAAAAGCAGAGCATCCCAGGATGCAGACTaGTCTCGGGCAACAGAGCAG +
Preference number: 4 (lower is better)
Translates to: TLSTLNAFSSKFPNKSRASQDAD*SRATEQ
Trigger: CTGCTCTGTTGCCCGAGAGCAGTCTGCATCCTGGGA...TGCTCTGCTTTTATTTGGGAATTTCGATGAAAAAGCGTTCAGAGTAGATAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACAAAGCAACGGGACCTGCCTaGAAAAGGAACTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: GCIPEYKNLLTSHSDKDKATGPA*KRNFLS
Trigger: TGACAGGAAGTTCCTTTTCCAGGCAGGTCCCGTTGC...TTTGTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGTGTGCATGCAATGTGTaGACAGAAACTCGGGATGTC +
Preference number: 4 (lower is better)
Translates to: NFQRLIYFTVSSHLSQHQCACNV*TETRDV
Trigger: GACATCCCGAGTTTCTGTCCACACATTGCATGCACA...CTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGCAGCCTGGGTACGGATaGCAACATCATCAATTTGCA +
Preference number: 4 (lower is better)
Translates to: NFQRLIYFTVSSHLSQHQQPGYG*QHHQFA
Trigger: TGCAAATTGATGATGTTGCCATCCGTACCCAGGCTG...CTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp CATACAGCGTTTAACACGAACCTGATACCTGTAGAAAGAACTGAGTATCGGGACAAACGGAACATCACATaGTCATGGTCAAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HTAFNTNLIPVERTEYRDKRNIT*SWSKRW
Trigger: CCACCTCTTTGACCATGACCATGTGATGTTCCGTTT...GTCCCGATACTCAGTTCTTTCTACAGGTATCAGGTTCGTGTTAAACGCTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GCTAGAAGGCTGTTCAAACAGCGGAGACCACATACAATGAGAATGTTCCTGAACATCTACTGTACAACATaGGAATCGGTTAAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: ARRLFKQRRPHTMRMFLNIYCTT*ESVKRA
Trigger: GGCTCTCTTAACCGATTCCCATGTTGTACAGTAGAT...GTTCAGGAACATTCTCATTGTATGTGGTCTCCGCTGTTTGAACAGCCTTCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 72 bp ACTTCCTGTCAACCAAAGCATACATCGCTTACAATGTaGAAGCGGTTGAGAAAACGCACACTCAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: TSCQPKHTSLTM*KRLRKRTLSIC
Trigger: ACAGATGCTGAGTGTGCGTTTTCTCAACCGCTTCAACATTGTAAGCGATGTATGCTTTGGTTGACAGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTGGGATTTCAAACATTTaGACATGTCGGTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFGISNI*TCRLHP
Trigger: GGGATGCAACCGACATGTTCAAATGTTTGAAATCCC...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAACTGAGGAGTTTTGGGTaGTCTGGCCCTGCCTATTTC +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKLRSFG*SGPAYF
Trigger: GAAATAGGCAGGGCCAGATCACCCAAAACTCCTCAG...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp TCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATCAGCTGCGAGAGGAGTaGCACGTTTTTGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SNIVGFQTFEHVGCIPEYQLREE*HVFVLV
Trigger: AACCAGAACAAAAACGTGGCACTCCTCTCGCAGCTG...ATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp CTTAAGATTGGTCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCAGTCCATTCCCATTGGTaGCTGGGCTTACGAAACACG +
Preference number: 4 (lower is better)
Translates to: LKIGLTLWDFKHLNMSVAVHSHW*LGLRNT
Trigger: CGTGTTTCGTAAGCCCAGGCACCAATGGGAATGGAC...TGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGACCAATCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp CTTAAGATTGGTCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCAATGTGTGGGGCGCTGTaGATGCAATGTGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: LKIGLTLWDFKHLNMSVAMCGAL*MQCVDR
Trigger: TCTGTCCACACATTGCATGCACAGCGCCCCACACAT...TGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGACCAATCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp GGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACAAATGGGTGATCTGGCCCTaGCTATTTCACAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GCIPEYKNLLTSHSDKDKWVIWP*LFHRLS
Trigger: AGAAAGCCTGTGAAATAGGCAGGGCCAGATCACCCA...TTTGTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp TCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATTCACAAATTCGGAGCTaGCTGGGGTCTAACTACCAG +
Preference number: 4 (lower is better)
Translates to: SNIVGFQTFEHVGCIPEYSQIRS*LGSNYQ
Trigger: CTGGTAGTTAGACCCCAGGCAGCTCCGAATTTGTGA...ATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTCCAACACAGGAAGGCTaGGAAAAGCACATGGAAATA +
Preference number: 4 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFPTQEG*EKHMEI
Trigger: TATTTCCATGTGCTTTTCGCAGCCTTCCTGTGTTGG...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GTCGGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACTTAATGGTTTTTGACTaGAGCCTCAAGCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VGCIPEYKNLLTSHSDKDLMVFD*SLKPFS
Trigger: GCTGAACGGCTTGAGGCTCCAGTCAAAAACCATTAA...GTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp GGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACAAAGCCACGTTTTTGTTCTaGTTGGGGTTGGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: GCIPEYKNLLTSHSDKDKATFLF*LGLAAN
Trigger: GTTTGCAGCCAACCCCAACCAGAACAAAAACGTGGC...TTTGTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp AACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAGTCCTGAGGAGTTTTaGGTGATCTGGCCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: NIVGFQTFEHVGCIPEYKSPEEF*VIWPCL
Trigger: TAGGCAGGGCCAGATCACCCAAAACTCCTCAGGACT...TTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp GCAAATTACACTGAAAACGAAATAATGGCAGAGCCAAGGGGGAACAAGGGAGAACAGAAAACTGCGGCTTaGCAAATTACACTGAAAACG +
Preference number: 4 (lower is better)
Translates to: ANYTENEIMAEPRGNKGEQKTAA*QITLKT
Trigger: CGTTTTCAGTGTAATTTGCCAAGCCGCAGTTTTCTG...TTCTCCCTTGTTCCCCCTTGGCTCTGCCATTATTTCGTTTTCAGTGTAATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AACTTCAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCAATGTGAACCCTGCCTaGGATCCGAGATTCAGATTC +
Preference number: 4 (lower is better)
Translates to: NFRELSKAHILHSFFSPVNVNPA*DPRFRF
Trigger: GAATCTGAATCTCGGATCCCAGGCAGGGTTCACATT...GACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 72 bp CAACCAAAGCATACATCGCTTACAATGTTGAAGCGGTaGAGAAAACGCACACTCAGCATCTGTCTAACATCT +
Preference number: 4 (lower is better)
Translates to: QPKHTSLTMLKR*RKRTLSICLTS
Trigger: AGATGTTAGACAGATGCTGAGTGTGCGTTTTCTCAACCGCTTCAACATTGTAAGCGATGTATGCTTTGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp AACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAGGCCTCCTGTCAGCTaGATTCTTATTCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: NFQRLIYFTVSSHLSQHQRPPVS*ILILFH
Trigger: ATGAAAGAGAATAAGAATTCAGCTGACAGGAGGCCT...CTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp GGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACAAAAAAAGAAAGCACTTGTaGCTTCAGGGCTGTCTTGCG +
Preference number: 4 (lower is better)
Translates to: GCIPEYKNLLTSHSDKDKKRKHL*LQGCLA
Trigger: CGCAAGACAGCCCTGAAGTCACAAGTGCTTTCTTTT...TTTGTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp AACTTCAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCGCCAAGAAAGAAACCTaGACGATGTCACTGAAAGGT +
Preference number: 4 (lower is better)
Translates to: NFRELSKAHILHSFFSPVAKKET*TMSLKG
Trigger: ACCTTTCAGTGACATCGTTCAGGTTTCTTTCTTGGC...GACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp GTCGGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACTTAGAGGTTAAAGCATaGTTCAGGTTCACCACCATC +
Preference number: 4 (lower is better)
Translates to: VGCIPEYKNLLTSHSDKDLEVKA*FRFTTI
Trigger: GATGGTGGTGAACCTGAAGCATGCTTTAACCTCTAA...GTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp AACTTCAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCTTAATGGTTTTTGACTaGAGCCTCAAGCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: NFRELSKAHILHSFFSPVLMVFD*SLKPFS
Trigger: GCTGAACGGCTTGAGGCTCCAGTCAAAAACCATTAA...GACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAAAATTCGGAGCTGCCTaGGGTCTAACTACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKKFGAA*GLTTRG
Trigger: TCCTCTGGTAGTTAGACCCCAGGCAGCTCCGAATTT...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp AACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAACTTCACCAATGCTGCTaGACAGGCTTCGTAACTCAT +
Preference number: 4 (lower is better)
Translates to: NIVGFQTFEHVGCIPEYKLHQCC*TGFVTH
Trigger: ATGAGTTACGAAGCCTGTTCAGCAGCATTGGTGAAG...TTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTGGGACTTGTTGGTTTTaGAGGAAACCTGTAAGATTT +
Preference number: 4 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFGTCWF*RKPVRF
Trigger: AAATCTTACAGGTTTCCTTCAAAACCAACAAGTCCC...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp AGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCACATCATTTTCACAGTTaGAGCTTAAGACAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RELSKAHILHSFFSPVPAHHFHS*SLRQSS
Trigger: AGAACTCTGTCTTAAGCTTCAACTGTGAAAATGATG...TGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR TCA 90 bp AACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAGAATGTTCCTGAACTaGGAAACTTCAGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: NFQRLIYFTVSSHLSQHQRMFLN*ETSGNF
Trigger: AAAGTTCCCTGAAGTTTCTCAGTTCAGGAACATTCT...CTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR TCA 90 bp CTTAAGATTGGTCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCAAGATGTAATGAACTTTaGGGACACAGGGCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LKIGLTLWDFKHLNMSVARCNEL*GHRASN
Trigger: GTTGCTGGCCCTGTGTCCTCAAAGTTCATTACATCT...TGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGACCAATCTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAGAGTATCGGGACAATTaGGTCGTTGGAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKEYRDN*VVGTVS
Trigger: GCTTACAGTTCCAACGACTCAATTGTCCCGATACTC...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp CAGACAAAGACAAACACTTGTGAAAATTGGCGCAAAATGAGTTGTACACTAACAGGTAATTGCCTCTTCTaGCTCCGACCGTTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: QTKTNTCENWRKMSCTLTGNCLF*LRPFVK
Trigger: TTTGACAAACGGTCGGAGGCAGAAGAGGCAATTACC...TGTTAGTGTACAACTCATTTTGCGCCAATTTTCACAAGTGTTTGTCTTTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAGGTAATTGCCTCTTCTaGCTCCGACCGTTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKGNCLF*LRPFVK
Trigger: TTTGACAAACGGTCGGAGGCAGAAGAGGCAATTACC...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp CAGACAAAGACAAACACTTGTGAAAATTGGCGCAAAATGAGTTGTACACTAACAATTGAAACTGGTAATTaGCTCTTCTGCCTCCGACCG +
Preference number: 4 (lower is better)
Translates to: QTKTNTCENWRKMSCTLTIETGN*LFCLRP
Trigger: CGGTCGGAGGCAGAAGAGGCAATTACCAGTTTCAAT...TGTTAGTGTACAACTCATTTTGCGCCAATTTTCACAAGTGTTTGTCTTTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp GGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACAAAACCATCCAGAGGGACTaGTTAGTCAATGCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: GCIPEYKNLLTSHSDKDKTIQRD*LVNAVL
Trigger: TAGAACTGCATTGACTAACCAGTCCCTCTGGATGGT...TTTGTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp ACATTATCTACTCTGAACGCTTTTTCATCGAAATTCCCAAATAAAAGCAGAGCAATCTTCAGGCGTGCCTaGAGCTTAGATCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: TLSTLNAFSSKFPNKSRAIFRRA*SLDLTL
Trigger: CAGAGTCAGATCTAAGCTCCAGGCACGCCTGAAGAT...TGCTCTGCTTTTATTTGGGAATTTCGATGAAAAAGCGTTCAGAGTAGATAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp TGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAACCTTCCCTAAAGAACCCACGTaGTTCTTTGAACACACGATG +
Preference number: 4 (lower is better)
Translates to: WDFKHLNMSVASQSIKTFPKEPT*FFEHTM
Trigger: CATCGTGTGTTCAAAGAACCACGTGGGTTCTTTAGG...GAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596459.5
CDS-3UTR TCA 90 bp AACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAGTCTGTGGAGACATTaGATGAAACGCGTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: NIVGFQTFEHVGCIPEYKSLWRH*MKRVLD
Trigger: GTCTAACACGCGTTTCATTCAATGTCTCCACAGACT...TTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp GTCGGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACTTTGAACATGTCGGTTaGATCCCAGAGTATAAAAAC +
Preference number: 4 (lower is better)
Translates to: VGCIPEYKNLLTSHSDKDFEHVG*IPEYKN
Trigger: GTTTTTATACTCTGGGATGCAACCGACATGTTCAAA...GTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR GCA 90 bp AACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGATTCAGAAATGCTTTTaGTTGAGGCAAGGATTGGTT +
Preference number: 4 (lower is better)
Translates to: NFQRLIYFTVSSHLSQHQIQKCF*LRQGLV
Trigger: AACCAATCCTTGCCTCAAGCAAAAGCATTTCTGAAT...CTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp AAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATAATTGTGGTGCCTGCCTATTaGTCAATTTCACACTTCAAT +
Preference number: 4 (lower is better)
Translates to: KGSYTSQFLLTCPSIRIIVVPAY*SISHFN
Trigger: ATTGAAGTGTGAAATTGAGCAATAGGCAGGCACCAC...AATTATTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp CAGACAAAGACAAACACTTGTGAAAATTGGCGCAAAATGAGTTGTACACTAACACGTTTTTGTTCTGGTTaGGGTTGGCTGCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: QTKTNTCENWRKMSCTLTRFCSG*GWLQTS
Trigger: TGAAGTTTGCAGCCAACCCCAACCAGAACAAAAACG...TGTTAGTGTACAACTCATTTTGCGCCAATTTTCACAAGTGTTTGTCTTTGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp GCAAATTACACTGAAAACGAAATAATGGCAGAGCCAAGGGGGAACAAGGGAGAAAACACTTGTGAAAATTaGCGCAAAATGAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: ANYTENEIMAEPRGNKGENTCEN*RKMSCT
Trigger: TGTACAACTCATTTTGCGCCAATTTTCACAAGTGTT...TTCTCCCTTGTTCCCCCTTGGCTCTGCCATTATTTCGTTTTCAGTGTAATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp ACATTATCTACTCTGAACGCTTTTTCATCGAAATTCCCAAATAAAAGCAGAGCAAGTCCGATGCCGGACTaGGTAAGTCATGTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: TLSTLNAFSSKFPNKSRASPMPD*VSHVFS
Trigger: TGAAAAGACATGACTTACCCAGTCCGGCATCGGACT...TGCTCTGCTTTTATTTGGGAATTTCGATGAAAAAGCGTTCAGAGTAGATAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp AGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATTTATTGTTGACTTTTaGACACCAGTGTCAGACTTT +
Preference number: 4 (lower is better)
Translates to: RELSKAHILHSFFSPVPAFIVDF*TPVSDF
Trigger: AAAGTCTGACACTGGTGTCCAAAAGTCAACAATAAA...TGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
3UTR CAA 72 bp ACTGCACATTCTTGCGTCACAGATTCAGAAATGCTTTaGCTTGAGGCAAGGATTGGTTTCTTAAGATCTTAC +
Preference number: 4 (lower is better)
Translates to: TAHSCVTDSEML*LEARIGFLRSY
Trigger: GTAAGATCTTAAGAAACCAATCCTTGCCTCAAGCAAAAGCATTTCTGAATCTGTGACGCAAGAATGTGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp AACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAGAACCTGGGGGTTTATaGCCATTGAAACTGGTAATT +
Preference number: 4 (lower is better)
Translates to: NIVGFQTFEHVGCIPEYKEPGGL*PLKLVI
Trigger: AATTACCAGTTTCAATGGTCATAAACCCCCAGGTTC...TTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp TGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAACCTTCGGGACTTGTTGGTTTTaGAGGAAACCTGTAAGATTT +
Preference number: 4 (lower is better)
Translates to: WDFKHLNMSVASQSIKTFGTCWF*RKPVRF
Trigger: AAATCTTACAGGTTTCCTTCAAAACCAACAAGTCCC...GAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR TCA 90 bp AACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAACGGGAGAAATTATCGTaGACAACAGTATCCAATGTG +
Preference number: 4 (lower is better)
Translates to: NIVGFQTFEHVGCIPEYKREKLS*TTVSNV
Trigger: CACATTGGATACTGTTGTTCACGATAATTTCTCCCG...TTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp CAGACAAAGACAAACACTTGTGAAAATTGGCGCAAAATGAGTTGTACACTAACACAGCAACTAGAACCTTaGTGGAACAGAGATTGCTTT +
Preference number: 4 (lower is better)
Translates to: QTKTNTCENWRKMSCTLTQQLEP*WNRDCF
Trigger: AAAGCAATCTCTGTTCCATCAAGGTTCTAGTTGCTG...TGTTAGTGTACAACTCATTTTGCGCCAATTTTCACAAGTGTTTGTCTTTGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAACCTGTAGAAAGAACTaGGTATCGGGACAATTGAGT +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKTCRKN*VSGQLS
Trigger: ACTCAATTGTCCCGATACTCAGTTCTTTCTACAGGT...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp ACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAATCCTTCCACAAGCTTaGAAGCTAAGACTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: TLWDFKHLNMSVASQSIKILPQA*KLRLPN
Trigger: ATTTGGGAGTCTTAGCTTGCAAGCTTGTGGAAGGAT...TTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTAACACTTGTGAAAATTaGCGCAAAATGAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFNTCEN*RKMSCT
Trigger: TGTACAACTCATTTTGCGCCAATTTTCACAAGTGTT...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CCA 90 bp AACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAACTTTTCAATGCCTGGTaGACAAATGGCCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: NIVGFQTFEHVGCIPEYKLFNAW*TNGLHL
Trigger: CAAATGAAGGCCATTTGTCCACCAGGCATTGAAAAG...TTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CCA 90 bp TCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAGGCTTCTCTTCTaGTGGAAGAAAAATCCAGTC +
Preference number: 4 (lower is better)
Translates to: SNIVGFQTFEHVGCIPEYKRLLF*WKKNPV
Trigger: GACTGGATTTTTCTTCCACCAGAAGAGAAGCCTTTT...ATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR TCA 90 bp AAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATAATTCATCATTTTCACAGTTaGAGCTTAAGACAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: KGSYTSQFLLTCPSIRIIHHFHS*SLRQSS
Trigger: AGAACTCTGTCTTAAGCTTCAACTGTGAAAATGATG...AATTATTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR GCA 90 bp AACTTCAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCATCCCGAATAAGTTTTaGAGATTCAACTTCACCAAT +
Preference number: 4 (lower is better)
Translates to: NFRELSKAHILHSFFSPVIPNKF*RFNFTN
Trigger: ATTGGTGAAGTTGAATCTGCAAAACTTATTCGGGAT...GACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTGAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp AACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAACCAAGCTATGTTAAATaGTCTGGAAAACGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NIVGFQTFEHVGCIPEYKPSYVK*SGKREK
Trigger: TTTCTCCCGTTTTCCAGAGCATTTAACATAGCTTGG...TTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR GCA 90 bp CTTAAGATTGGTCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATATTTTTCAAAAATCTaGAGGGTAACAGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LKIGLTLWDFKHLNMSVAYFSKI*RVTAKP
Trigger: GGGCTTGGCTGTTACCCTGCAGATTTTTGAAAAATA...TGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGACCAATCTTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596459.5
CDS-3UTR TCA 90 bp ACATTATCTACTCTGAACGCTTTTTCATCGAAATTCCCAAATAAAAGCAGAGCAGTGAAATGTAACAGCTaGGTGATGTCAATTTCGATT +
Preference number: 4 (lower is better)
Translates to: TLSTLNAFSSKFPNKSRAVKCNS*VMSISI
Trigger: AATCGAAATTGACATCACTCAGCTGTTACATTTCAC...TGCTCTGCTTTTATTTGGGAATTTCGATGAAAAAGCGTTCAGAGTAGATAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp CACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCATGGCGTTTCCTGGCACGTaGACGCCAGAGAGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: HQPEEAFPGTLTPESPLMAFPGT*TPESPL
Trigger: GAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGC...CATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR CAA 90 bp CACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCATGACGAGGACCCGCGAGTaGATGATCCGCCCAAACCGA +
Preference number: 5 (lower is better)
Translates to: HQPEEAFPGTLTPESPLMTRTRE*MIRPNR
Trigger: TCGGTTTGGGCGGATCATCAACTCGCGGGTCCTCGT...CATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS TCA 90 bp GAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCATGTaGTCGACGCCCATGGGGGAGAACCTGAATCTCTGCGCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: EEAFPGTLTPESPLM*STPMGENLNLCAWW
Trigger: CCACCAGGCGCAGAGATTCAGGTTCTCCCCCATGGGCGTCGATCACATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp CACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCATGTGGTGCTGTCCTCGTTaGCGGAATAACTGTAGTCTG +
Preference number: 5 (lower is better)
Translates to: HQPEEAFPGTLTPESPLMWCCPR*RNNCSL
Trigger: CAGACTACAGTTATTCCGCAAACGAGGACAGCACCA...CATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR CAA 90 bp GACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTCCATCAGAAGGGTGTTACGAGGACCCGCGAGTaGATGATCCGCCCAAACCGA +
Preference number: 5 (lower is better)
Translates to: DSRGSFRSGNPAFHQKGVTRTRE*MIRPNR
Trigger: TCGGTTTGGGCGGATCATCAACTCGCGGGTCCTCGT...AACACCCTTCTGATGGAAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CAA 90 bp AATGCACCAGCCGGAGGAGGCGTTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCAACGTCTTCTCATTTaGGTGCTGTCCTCGTTTGCG +
Preference number: 5 (lower is better)
Translates to: NAPAGGGVSWHVDAREPAQRLLI*VLSSFA
Trigger: CGCAAACGAGGACAGCACCAAAATGAGAAGACGTTG...AGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGCCTCCTCCGGCTGGTGCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR CAA 90 bp TCGGGCAACAGAGCAGGGACCCTCTTTTGTGTCGAATCCGGGCAATGGGCCTCGTACAAGTTGGCGTCTTaGATCACCTCTGAGCTCGGG +
Preference number: 5 (lower is better)
Translates to: SGNRAGTLFCVESGQWASYKLAS*ITSELG
Trigger: CCCGAGCTCAGAGGTGATCAAAGACGCCAACTTGTA...CGAGGCCCATTGCCCGGATTCGACACAAAAGAGGGTCCCTGCTCTGTTGCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp ATCGACGCCCATGGGGGAGAACCTCCTCAGCCTCCTCAAACCAAAGCCAACGTCCGGATCACTTTCACATaGGTGACGGCACCAAACGGC +
Preference number: 5 (lower is better)
Translates to: IDAHGGEPPQPPQTKANVRITFT*VTAPNG
Trigger: GCCGTTTGGTGCCGTCACCAATGTGAAAGTGATCCG...GACGTTGGCTTTGGTTTGAGGAGGCTGAGGAGGTTCTCCCCCATGGGCGTCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR CAA 90 bp CGCTCATGTGATCGACGCCCATGGGGGAGAACCTCCTCAGCCTCCTCAAACCAATACAAGTTGGCGTCTTaGATCACCTCTGAGCTCGGG +
Preference number: 5 (lower is better)
Translates to: RSCDRRPWGRTSSASSNQYKLAS*ITSELG
Trigger: CCCGAGCTCAGAGGTGATCAAAGACGCCAACTTGTA...TTGGTTTGAGGAGGCTGAGGAGGTTCTCCCCCATGGGCGTCGATCACATGAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR CAA 90 bp AACAGCAGCACGGTTCAGTCCCTGGAGGCTGGGTCTCCAGGACTAAGGCCAAGCCCGCTGATGTACAAGTaGGCGTCTTTGATCACCTCT +
Preference number: 5 (lower is better)
Translates to: NSSTVQSLEAGSPGLRPSPLMYK*ASLITS
Trigger: AGAGGTGATCAAAGACGCCAACTTGTACATCAGCGG...GCTTGGCCTTAGTCCTGGAGACCCAGCCTCCAGGGACTGAACCGTGCTGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp CAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCGCGTTTCCTGGCACGTaGACGCCAGAGAGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: QGTFKGSYTSQFLLTCPSAFPGT*TPESPL
Trigger: GAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGC...GCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp AACAGCAGCACGGTTCAGTCCCTGGAGGCTGGGTCTCCAGGACTAAGGCCAAGCAGACAGAGTTCTCTGTaGAATGCTAGCTATGGGCAT +
Preference number: 5 (lower is better)
Translates to: NSSTVQSLEAGSPGLRPSRQSSL*NASYGH
Trigger: ATGCCCATAGCTAGCATTCAACAGAGAACTCTGTCT...GCTTGGCCTTAGTCCTGGAGACCCAGCCTCCAGGGACTGAACCGTGCTGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTGCGTTTCCTGGCACGTaGACGCCAGAGAGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFAFPGT*TPESPL
Trigger: GAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAACGC...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp AGGGGATGGGCATCCTCAATTGTCCAGGGGCCTCTCGAGACGCTGACCTGCTCTGATTCAGAAATGCTTTaGCTTGAGGCAAGGATTGGT +
Preference number: 5 (lower is better)
Translates to: RGWASSIVQGPLETLTCSDSEML*LEARIG
Trigger: ACCAATCCTTGCCTCAAGCAAAAGCATTTCTGAATC...AGAGCAGGTCAGCGTCTCGAGAGGCCCCTGGACAATTGAGGATGCCCATCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp GACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTCCATCAGAAGGGTGTTGGTGGTGCCTGCCTATaGCTCAATTTCACACTTCAA +
Preference number: 5 (lower is better)
Translates to: DSRGSFRSGNPAFHQKGVGGACL*LNFTLQ
Trigger: TTGAAGTGTGAAATTGAGCAATAGGCAGGCACCACC...AACACCCTTCTGATGGAAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp GCATGTGTGGGAGTGAGACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTAGACAGAGTTCTCTGTaGAATGCTAGCTATGGGCAT +
Preference number: 5 (lower is better)
Translates to: ACVGVRLQGEFQKRESRLRQSSL*NASYGH
Trigger: ATGCCCATAGCTAGCATTCAACAGAGAACTCTGTCT...AAGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTCTCACTCCCACACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CAA 90 bp GGCATGTGTGGGAGTGAGACTCCAGGGGGAGTTTCAGAAGCGGGAATCCCGCCTTTGATGGAACAGAGATaGCTTTTCAGGAGTGACAGT +
Preference number: 5 (lower is better)
Translates to: GMCGSETPGGVSEAGIPPLMEQR*LFRSDS
Trigger: ACTGTCACTCCTGAAAAGCAATCTCTGTTCCATCAA...AGGCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTCTCACTCCCACACATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS CCA 90 bp TATTTTTCAAAAATCTGCAGGGTAACAGCCAAGCCCTCTGCCCAGTaGACACCTGAGCACTCCTGCCACCACTACCCATCTCAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: YFSKICRVTAKPSAQ*TPEHSCHHYPSQPS
Trigger: AGAAGGCTGAGATGGGTAGTGGTGGCAGGAGTGCTCAGGTGTCCACTGGGCAGAGGGCTTGGCTGTTACCCTGCAGATTTTTGAAAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596459.5
CDS GCA 90 bp GGAACCTGGGGGTTTATGACCATTGAAACTGGTAATTGCCTCTTCTaGCTCCGACCGTTTGTCAAACCGGATAAACGCAACCCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: GTWGFMTIETGNCLF*LRPFVKPDKRNPSG
Trigger: TCCAGAGGGGTTGCGTTTATCCGGTTTGACAAACGGTCGGAGGCAGAAGAGGCAATTACCAGTTTCAATGGTCATAAACCCCCAGGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp TCAGATAAAAGGGGGCGAGGAAAGAAGCTGAGGTGCTACAAGCCCGTCATCATTGCTTACGAAACACGTTaGTGTCCTTCTCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: SDKRGRGKKLRCYKPVIIAYETR*CPSLEG
Trigger: GCCCTCCAGAGAAGGACACAAACGTGTTTCGTAAGC...AATGATGACGGGCTTGTAGCACCTCAGCTTCTTTCCTCGCCCCCTTTTATCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp TCACATGGTCATGGTCAAAGAGGTGGCCCCAAACCAACGGAAAAGGCTTCTCTTCAATGGGCCTCGGTTTaGGCTTTTCCTGAGGATCTG +
Preference number: 5 (lower is better)
Translates to: SHGHGQRGGPKPTEKASLQWASV*AFPEDL
Trigger: CAGATCCTCAGGAAAAGCCAAAACCGAGGCCCATTG...AAGAGAAGCCTTTTCCGTTGGTTTGGGGCCACCTCTTTGACCATGACCATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS CCA 90 bp GAACCTCCTCAGCCTCCTCAAACCAAAGCCAACGTCTTCTCATTTTaGTGCTGTCCTCGTTTGCGGAATAACTGTAGTCTGATCCACGAG +
Preference number: 5 (lower is better)
Translates to: EPPQPPQTKANVFSF*CCPRLRNNCSLIHE
Trigger: CTCGTGGATCAGACTACAGTTATTCCGCAAACGAGGACAGCACCAAAATGAGAAGACGTTGGCTTTGGTTTGAGGAGGCTGAGGAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593807.1
CDS-3UTR CAA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTACGAGGACCCGCGAGTaGATGATCCGCCCAAACCGA +
Preference number: 5 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFTRTRE*MIRPNR
Trigger: TCGGTTTGGGCGGATCATCAACTCGCGGGTCCTCGT...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp GTCGGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACACGAGGACCCGCGAGTaGATGATCCGCCCAAACCGA +
Preference number: 5 (lower is better)
Translates to: VGCIPEYKNLLTSHSDKDTRTRE*MIRPNR
Trigger: TCGGTTTGGGCGGATCATCAACTCGCGGGTCCTCGT...GTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp GCAAATTACACTGAAAACGAAATAATGGCAGAGCCAAGGGGGAACAAGGGAGAAGCTGTCTTGCGAAGTTaGGGGACAGGAACCCCTGAC +
Preference number: 5 (lower is better)
Translates to: ANYTENEIMAEPRGNKGEAVLRS*GTGTPD
Trigger: GTCAGGGGTTCCTGTCCCCAAACTTCGCAAGACAGC...TTCTCCCTTGTTCCCCCTTGGCTCTGCCATTATTTCGTTTTCAGTGTAATTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS CCA 90 bp TTACCTCCTCAGCCTCCTCAAACCAAAGCCAACGTCTTCTCATTTTaGTGCTGTCCTCGTTTGCGGAATAACTGTAGTCTGATCCACGAG +
Preference number: 5 (lower is better)
Translates to: LPPQPPQTKANVFSF*CCPRLRNNCSLIHE
Trigger: CTCGTGGATCAGACTACAGTTATTCCGCAAACGAGGACAGCACCAAAATGAGAAGACGTTGGCTTTGGTTTGAGGAGGCTGAGGAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595499.1
CDS-3UTR CAA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCGGATCACTTTCACATaGGTGACGGCACCAAACGGC +
Preference number: 5 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFRITFT*VTAPNG
Trigger: GCCGTTTGGTGCCGTCACCAATGTGAAAGTGATCCG...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp GCTAGAAGGCTGTTCAAACAGCGGAGACCACATACAATGAGAATGTTCCTGAACCAATGGGCCTCGGTTTaGGCTTTTCCTGAGGATCTG +
Preference number: 5 (lower is better)
Translates to: ARRLFKQRRPHTMRMFLNQWASV*AFPEDL
Trigger: CAGATCCTCAGGAAAAGCCAAAACCGAGGCCCATTG...GTTCAGGAACATTCTCATTGTATGTGGTCTCCGCTGTTTGAACAGCCTTCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CAA 90 bp AGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCAAGCAGGGACCCTCTTTaGTGTCGAATCCGGGCAATG +
Preference number: 5 (lower is better)
Translates to: RELSKAHILHSFFSPVPASRDPL*CRIRAM
Trigger: CATTGCCCGGATTCGACACAAAAGAGGGTCCCTGCT...TGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CAA 90 bp CATACAGCGTTTAACACGAACCTGATACCTGTAGAAAGAACTGAGTATCGGGACGACTTCAGGGCTGTCTaGCGAAGTTTGGGGACAGGA +
Preference number: 5 (lower is better)
Translates to: HTAFNTNLIPVERTEYRDDFRAV*RSLGTG
Trigger: TCCTGTCCCCAAACTTCGCAAGACAGCCCTGAAGTC...GTCCCGATACTCAGTTCTTTCTACAGGTATCAGGTTCGTGTTAAACGCTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTTACAAGTTGGCGTCTTaGATCACCTCTGAGCTCGGG +
Preference number: 5 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFYKLAS*ITSELG
Trigger: CCCGAGCTCAGAGGTGATCAAAGACGCCAACTTGTA...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTTCTGCCTCCGACCGTTaGTCAAACCGGATAAACGCA +
Preference number: 5 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFSASDR*SNRINA
Trigger: TGCGTTTATCCGGTTTGACAAACGGTCGGAGGCAGA...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp AACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGCGGATCACTTTCACATaGGTGACGGCACCAAACGGC +
Preference number: 5 (lower is better)
Translates to: NFQRLIYFTVSSHLSQHQRITFT*VTAPNG
Trigger: GCCGTTTGGTGCCGTCACCAATGTGAAAGTGATCCG...CTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp TCACATGGTCATGGTCAAAGAGGTGGCCCCAAACCAACGGAAAAGGCTTCTCTTACATCGCTTACAATGTaGAAGCGGTTGAGAAAACGC +
Preference number: 5 (lower is better)
Translates to: SHGHGQRGGPKPTEKASLTSLTM*KRLRKR
Trigger: GCGTTTTCTCAACCGCTTCAACATTGTAAGCGATGT...AAGAGAAGCCTTTTCCGTTGGTTTGGGGCCACCTCTTTGACCATGACCATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp AACTTCAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCGATGGGCATCCTCAATaGTCCAGGGGCCTCTCGAGA +
Preference number: 5 (lower is better)
Translates to: NFRELSKAHILHSFFSPVDGHPQ*SRGLSR
Trigger: TCTCGAGAGGCCCCTGGACAATTGAGGATGCCCATC...GACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp CAGACAAAGACAAACACTTGTGAAAATTGGCGCAAAATGAGTTGTACACTAACATCCAAAGGGCCGGTCTaGGCTCCCAACAGCAGCACG +
Preference number: 5 (lower is better)
Translates to: QTKTNTCENWRKMSCTLTSKGPV*APNSST
Trigger: CGTGCTGCTGTTGGGAGCCAAGACCGGCCCTTTGGA...TGTTAGTGTACAACTCATTTTGCGCCAATTTTCACAAGTGTTTGTCTTTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp CAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCAAAGGGATCTCCCCTTaGCAAACAGGCCTTGATAAG +
Preference number: 5 (lower is better)
Translates to: QGTFKGSYTSQFLLTCPSKGISP*QTGLDK
Trigger: CTTATCAAGGCCTGTTTGCAAAGGGGAGATCCCTTT...GCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp ACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTCTGTTTTTGTTCTGGTTGGGGTaGGCTGCAAACTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: TTIQRDWLVNAVLLRFLFLFWLG*AANFTV
Trigger: CACAGTGAAGTTTGCAGCCAACCCCAACCAGAACAA...AAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp AGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCAACAATGTTGAAGCGGTaGAGAAAACGCACACTCAGC +
Preference number: 5 (lower is better)
Translates to: RELSKAHILHSFFSPVPATMLKR*RKRTLS
Trigger: GCTGAGTGTGCGTTTTCTCAACCGCTTCAACATTGT...TGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp TCACATGGTCATGGTCAAAGAGGTGGCCCCAAACCAACGGAAAAGGCTTCTCTTTCAATCAAAGCCTCTTaGGTATTTCCCAAACCAGAT +
Preference number: 5 (lower is better)
Translates to: SHGHGQRGGPKPTEKASLSIKAS*VFPKPD
Trigger: ATCTGGTTTGGGAAATACCAAAGAGGCTTTGATTGA...AAGAGAAGCCTTTTCCGTTGGTTTGGGGCCACCTCTTTGACCATGACCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp TGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAACCTTCAGGAGTGCCACGTTTTaGTTCTGGTTGGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: WDFKHLNMSVASQSIKTFRSATF*FWLGLA
Trigger: AGCCAACCCCAACCAGAACAAAAACGTGGCACTCCT...GAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp GCAAATTACACTGAAAACGAAATAATGGCAGAGCCAAGGGGGAACAAGGGAGAACAGTCTGTGGAGACATaGAATGAAACGCGTGTTAGA +
Preference number: 5 (lower is better)
Translates to: ANYTENEIMAEPRGNKGEQSVET*NETRVR
Trigger: TCTAACACGCGTTTCATTCAATGTCTCCACAGACTG...TTCTCCCTTGTTCCCCCTTGGCTCTGCCATTATTTCGTTTTCAGTGTAATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp AATTATCGTGAACAACAGTATCCAATGTGTGGGGCGCTGTGCATGCAATGTGTGCAGAAATGCTTTTGCTaGAGGCAAGGATTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: NYREQQYPMCGALCMQCVQKCFC*RQGLVS
Trigger: AGAAACCAATCCTTGCCTCAAGCAAAAGCATTTCTG...CACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACGATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp AATTATCGTGAACAACAGTATCCAATGTGTGGGGCGCTGTGCATGCAATGTGTGACAGAAAACTGCGGCTaGGCAAATTACACTGAAAAC +
Preference number: 5 (lower is better)
Translates to: NYREQQYPMCGALCMQCVTENCG*ANYTEN
Trigger: GTTTTCAGTGTAATTTGCCAAGCCGCAGTTTTCTGT...CACACATTGCATGCACAGCGCCCCACACATTGGATACTGTTGTTCACGATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp TATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATAATTGATAGGATTTACAAGTTGGCGTCTTaGATCACCTCTGAGCTCGGG +
Preference number: 5 (lower is better)
Translates to: YTSQFLLTCPSIRIIDRIYKLAS*ITSELG
Trigger: CCCGAGCTCAGAGGTGATCAAAGACGCCAACTTGTA...AATCCTATCAATTATTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CAA 90 bp AACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAATCTGCCTCCGACCGTTaGTCAAACCGGATAAACGCA +
Preference number: 5 (lower is better)
Translates to: NIVGFQTFEHVGCIPEYKSASDR*SNRINA
Trigger: TGCGTTTATCCGGTTTGACAAACGGTCGGAGGCAGA...TTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp CAGACAAAGACAAACACTTGTGAAAATTGGCGCAAAATGAGTTGTACACTAACAAGGAGTGCCACGTTTTaGTTCTGGTTGGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: QTKTNTCENWRKMSCTLTRSATF*FWLGLA
Trigger: AGCCAACCCCAACCAGAACAAAAACGTGGCACTCCT...TGTTAGTGTACAACTCATTTTGCGCCAATTTTCACAAGTGTTTGTCTTTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp AACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATCCTTCCACAAGCTaGCAAGCTAAGACTCCCAAA +
Preference number: 5 (lower is better)
Translates to: NFQRLIYFTVSSHLSQHQNPSTS*QAKTPK
Trigger: TTTGGGAGTCTTAGCTTGCAAGCTTGTGGAAGGATT...CTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CAA 90 bp CAGACAAAGACAAACACTTGTGAAAATTGGCGCAAAATGAGTTGTACACTAACACCCATCTCAGCCTTCTaGTCCCTAAAGAACCCACGT +
Preference number: 5 (lower is better)
Translates to: QTKTNTCENWRKMSCTLTPISAF*SLKNPR
Trigger: ACGTGGGTTCTTTAGGGACAAGAAGGCTGAGATGGG...TGTTAGTGTACAACTCATTTTGCGCCAATTTTCACAAGTGTTTGTCTTTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596459.5
CDS-3UTR CAA 90 bp CAGACAAAGACAAACACTTGTGAAAATTGGCGCAAAATGAGTTGTACACTAACATTGTTCTGGTTGGGGTaGGCTGCAAACTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: QTKTNTCENWRKMSCTLTLFWLG*AANFTV
Trigger: CACAGTGAAGTTTGCAGCCAACCCCAACCAGAACAA...TGTTAGTGTACAACTCATTTTGCGCCAATTTTCACAAGTGTTTGTCTTTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp GTCGGTTGCATCCCAGAGTATAAAAACCTTCTCACTTCTCATTCAGACAAAGACTGGGATTTCAAACATTaGAACATGTCGGTTGCATCC +
Preference number: 5 (lower is better)
Translates to: VGCIPEYKNLLTSHSDKDWDFKH*NMSVAS
Trigger: GGATGCAACCGACATGTTCAAATGTTTGAAATCCCA...GTCTTTGTCTGAATGAGAAGTGAGAAGGTTTTTATACTCTGGGATGCAACCGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp TATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATAATTGATAGGATTTTTGGTCCATTCCCATaGGTGCCTGGGCTTACGAAA +
Preference number: 5 (lower is better)
Translates to: YTSQFLLTCPSIRIIDRIFGPFP*VPGLTK
Trigger: TTTCGTAAGCCCAGGCACCAATGGGAATGGACCAAA...AATCCTATCAATTATTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp AACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATAAAGGCAACATCATCAATTaGCAAGGATCGCGCACACAG +
Preference number: 5 (lower is better)
Translates to: NIVGFQTFEHVGCIPEYKGNIIN*QGSRTQ
Trigger: CTGTGTGCGCGATCCTTGCAAATTGATGATGTTGCC...TTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp CAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCTCATCATTTTCACAGTaGAAGCTTAAGACAGAGTTC +
Preference number: 5 (lower is better)
Translates to: QGTFKGSYTSQFLLTCPSSSFSQ*KLKTEF
Trigger: GAACTCTGTCTTAAGCTTCAACTGTGAAAATGATGA...GCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CAA 90 bp AACTTCAGGGAACTTTCAAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCAATCCTTCCACAAGCTaGCAAGCTAAGACTCCCAAA +
Preference number: 5 (lower is better)
Translates to: NFRELSKAHILHSFFSPVNPSTS*QAKTPK
Trigger: TTTGGGAGTCTTAGCTTGCAAGCTTGTGGAAGGATT...GACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTTGAAAGTTCCCTGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596154.5
CDS-3UTR CAA 90 bp AGGTTCACCACCATCCAGAGGGACTGGTTAGTCAATGCAGTTCTACTTAGATTTTCATCATTTTCACAGTaGAAGCTTAAGACAGAGTTC +
Preference number: 5 (lower is better)
Translates to: RFTTIQRDWLVNAVLLRFSSFSQ*KLKTEF
Trigger: GAACTCTGTCTTAAGCTTCAACTGTGAAAATGATGA...AAATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATGGTGGTGAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp TATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATAATTGATAGGATTACAAATGGCCTTCATTaGGAAGCAAACCGGGTCAAG +
Preference number: 5 (lower is better)
Translates to: YTSQFLLTCPSIRIIDRITNGLH*EANRVK
Trigger: CTTGACCCGGTTTGCTTCCAAATGAAGGCCATTTGT...AATCCTATCAATTATTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp CAGACAAAGACAAACACTTGTGAAAATTGGCGCAAAATGAGTTGTACACTAACAAACCCACGTGGTTCTTaGAACACACGATGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: QTKTNTCENWRKMSCTLTNPRGS*NTRCSL
Trigger: CAGAGAACATCGTGTGTTCAAAGAACCACGTGGGTT...TGTTAGTGTACAACTCATTTTGCGCCAATTTTCACAAGTGTTTGTCTTTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596459.5
CDS-3UTR CAA 90 bp CTTAAGATTGGTCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATGGGATTTCAAACATTaGAACATGTCGGTTGCATCC +
Preference number: 5 (lower is better)
Translates to: LKIGLTLWDFKHLNMSVAWDFKH*NMSVAS
Trigger: GGATGCAACCGACATGTTCAAATGTTTGAAATCCCA...TGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGACCAATCTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS-3UTR CAA 90 bp AAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATAATTTGTAACTGCACATTCTaGCGTCACAGATTCAGAAAT +
Preference number: 5 (lower is better)
Translates to: KGSYTSQFLLTCPSIRIICNCTF*RHRFRN
Trigger: ATTTCTGAATCTGTGACGCAAGAATGTGCAGTTACA...AATTATTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp TCTAACATTGTGGGATTTCAAACATTTGAACATGTCGGTTGCATCCCAGAGTATATCATTACACGCCAATaGCCAATGCCACTTAAAAGA +
Preference number: 5 (lower is better)
Translates to: SNIVGFQTFEHVGCIPEYIITRQ*PMPLKR
Trigger: TCTTTTAAGTGGCATTGGCAATTGGCGTGTAATGAT...ATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS-3UTR CAA 90 bp AAAGGCTCATATACTTCACAGTTTCTTCTCACCTGTCCCAGCATCAGAATAATTCTTTGCAAACAGGCCTaGATAAGATGTAATGAACTT +
Preference number: 5 (lower is better)
Translates to: KGSYTSQFLLTCPSIRIILCKQA*IRCNEL
Trigger: AAGTTCATTACATCTTATCAAGGCCTGTTTGCAAAG...AATTATTCTGATGCTGGGACAGGTGAGAAGAAACTGTGAAGTATATGAGCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407627.7
CDS TCA 72 bp CCCATGGGGGAGAACCTGAATCTCTGCGCCTGGTGGTaGACGGGGCCTCCGAACCGTCGCGCTGGCGAGTGG +
Preference number: 6 (lower is better)
Translates to: PMGENLNLCAWW*TGPPNRRAGEW
Trigger: CCACTCGCCAGCGCGACGGTTCGGAGGCCCCGTTCACCACCAGGCGCAGAGATTCAGGTTCTCCCCCATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS CCA 72 bp CGCCTGGTGGTGAACGGGGCCTCCGAACCGTCGCGCTaGCGAGTGGTACAGCTGCGAGAGGAGTGCCACGTT +
Preference number: 6 (lower is better)
Translates to: RLVVNGASEPSR*RVVQLREECHV
Trigger: AACGTGGCACTCCTCTCGCAGCTGTACCACTCGCCAGCGCGACGGTTCGGAGGCCCCGTTCACCACCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS GCA 72 bp GGGCCTCCGAACCGTCGCGCTGGCGAGTGGTACAGCTaGGAGAGGAGTGCCACGTTTTTGTTCTGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: GPPNRRAGEWYS*ERSATFLFWLG
Trigger: CCCCAACCAGAACAAAAACGTGGCACTCCTCTCGCAGCTGTACCACTCGCCAGCGCGACGGTTCGGAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS TCA 72 bp TTTCCTGGCACGTTGACGCCAGAGAGCCCGCTCATGTaGTCGACGCCCATGGGGGAGAACCTGAATCTCTGC +
Preference number: 6 (lower is better)
Translates to: FPGTLTPESPLM*STPMGENLNLC
Trigger: GCAGAGATTCAGGTTCTCCCCCATGGGCGTCGATCACATGAGCGGGCTCTCTGGCGTCAACGTGCCAGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS GCA 72 bp CCGTCGCGCTGGCGAGTGGTACAGCTGCGAGAGGAGTaGCACGTTTTTGTTCTGGTTGGGGTTGGCTGCAAA +
Preference number: 6 (lower is better)
Translates to: PSRWRVVQLREE*HVFVLVGVGCK
Trigger: TTTGCAGCCAACCCCAACCAGAACAAAAACGTGGCACTCCTCTCGCAGCTGTACCACTCGCCAGCGCGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS CAA 90 bp GCAGGGACCCTCTTTTGTGTCGAATCCGGGCAATGGGCCTCGGTTTaGGCTTTTCCTGAGGATCTGGGATTCTGTAGTCTGATCCACGAG +
Preference number: 6 (lower is better)
Translates to: AGTLFCVESGQWASV*AFPEDLGFCSLIHE
Trigger: CTCGTGGATCAGACTACAGAATCCCAGATCCTCAGGAAAAGCCAAAACCGAGGCCCATTGCCCGGATTCGACACAAAAGAGGGTCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596154.5
CDS GCA 72 bp GAGGAGTGCCACGTTTTTGTTCTGGTTGGGGTTGGCTaGAAACTTCACTGTGATGGGCTCAGAGGAACCTGG +
Preference number: 6 (lower is better)
Translates to: EECHVFVLVGVG*KLHCDGLRGTW
Trigger: CCAGGTTCCTCTGAGCCCATCACAGTGAAGTTTGCAGCCAACCCCAACCAGAACAAAAACGTGGCACTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS CCA 72 bp CTCGGGCGAGCATACGACACCTTAATGGTTTTTGACTaGAGCCTCAAGCCGTTCAGCGTGTTGATCGCTCTC +
Preference number: 6 (lower is better)
Translates to: LGRAYDTLMVFD*SLKPFSVLIAL
Trigger: GAGAGCGATCAACACGCTGAACGGCTTGAGGCTCCAGTCAAAAACCATTAAGGTGTCGTATGCTCGCCCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407627.7
ENST00000593807.1
ENST00000596459.5
CDS GCA 72 bp TTCACCCCATTCATGGGCAAGGCCAGCACATTTGGGTaGCTGAGGGAAGGTGCTAGAATCTCTTGGCGTTTT +
Preference number: 6 (lower is better)
Translates to: FTPFMGKASTFG*LREGARISWRF
Trigger: AAAACGCCAAGAGATTCTAGCACCTTCCCTCAGGCACCCAAATGTGCTGGCCTTGCCCATGAATGGGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595499.1
CDS TCA 72 bp CCCGCTGATGTACAAGTTGGCGTCTTTGATCACCTCTaGGCTCGGGCGAGCATACGACACCTTAATGGTTTT +
Preference number: 6 (lower is better)
Translates to: PADVQVGVFDHL*ARASIRHLNGF
Trigger: AAAACCATTAAGGTGTCGTATGCTCGCCCGAGCTCAGAGGTGATCAAAGACGCCAACTTGTACATCAGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407627.7
ENST00000593807.1
ENST00000596154.5
ENST00000596459.5
CDS GCA 72 bp GGAACCTGGGGGTTTATGACCATTGAAACTGGTAATTaGCTCTTCTGCCTCCGACCGTTTGTCAAACCGGAT +
Preference number: 6 (lower is better)
Translates to: GTWGFMTIETGN*LFCLRPFVKPD
Trigger: ATCCGGTTTGACAAACGGTCGGAGGCAGAAGAGGCAATTACCAGTTTCAATGGTCATAAACCCCCAGGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS GCA 72 bp GGGTTTATGACCATTGAAACTGGTAATTGCCTCTTCTaGCTCCGACCGTTTGTCAAACCGGATAAACGCAAC +
Preference number: 6 (lower is better)
Translates to: GFMTIETGNCLF*LRPFVKPDKRN
Trigger: GTTGCGTTTATCCGGTTTGACAAACGGTCGGAGGCAGAAGAGGCAATTACCAGTTTCAATGGTCATAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407627.7
ENST00000596459.5
CDS CAA 72 bp TCAGCCTTCTTGTCCCTAAAGAACCCACGTGGTTCTTaGAACACACGATGTTCTCTGAACACTGCGATGTTC +
Preference number: 6 (lower is better)
Translates to: SAFLSLKNPRGS*NTRCSLNTAMF
Trigger: GAACATCGCAGTGTTCAGAGAACATCGTGTGTTCAAAGAACCACGTGGGTTCTTTAGGGACAAGAAGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596459.5
CDS GCA 72 bp CAAGCTGTGTCCTGCTACTTTATCCCGAATAAGTTTTaGAGATTCAACTTCACCAATGCTGCTGAACAGGCT +
Preference number: 6 (lower is better)
Translates to: QAVSCYFIPNKF*RFNFTNAAEQA
Trigger: AGCCTGTTCAGCAGCATTGGTGAAGTTGAATCTGCAAAACTTATTCGGGATAAAGTAGCAGGACACAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407627.7
ENST00000593807.1
ENST00000596459.5