RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELAPOR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000164659

Ensembl transcript IDs: ENST00000394714.6, ENST00000398276.6, ENST00000416314.5, ENST00000423294.5, ENST00000425689.1, ENST00000427812.1, ENST00000444627.5, ENST00000450689.7, ENST00000470853.1, ENST00000480216.1

Found 538 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATAGACCTGATGTATGGACAGGTAGGTGTCAGGTGGACATTCCTTaGACTGGTTGGTTTCTTTCTCAATGTAGTGGCCTGGAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: HRPDVWTGRCQVDIP*TGWFLSQCSGLEGR
Trigger: CCTGCCCTCCAGGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGTCCATACATCAGGTCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR GCA 90 bp CCTGATTGTTTTTACTCCCAGGCCCGCATGGAATACAAGCCTCTTTaGCATAGACCTGATGTATGGACAGGTAGGTGTCAGGTGGACATT +
Preference number: 1 (lower is better)
Translates to: PDCFYSQARMEYKPL*HRPDVWTGRCQVDI
Trigger: AATGTCCACCTGACACCTACCTGTCCATACATCAGGTCTATGGCAAAGAGGCTTGTATTCCATGCGGGCCTGGGAGTAAAAACAATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR GCA 90 bp CATGTTGCCAGGAAGGACATTCCACCATTTATATTCAAAGCCAAGTaGAGGCTCCGTTCCTGCTGGACATGGTCTACATTCTTTGGTTCC +
Preference number: 1 (lower is better)
Translates to: HVARKDIPPFIFKAK*RLRSCWTWSTFFGS
Trigger: GGAACCAAAGAATGTAGACCATGTCCAGCAGGAACGGAGCCTGCACTTGGCTTTGAATATAAATGGTGGAATGTCCTTCCTGGCAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR CCA 90 bp TTCCTTCTTCATCACATGGAGTATGGATCTGGAAATAGTCTTTTGTaGTACAGGGAGGGCGCTCTGTACACTCACTGGATCCTTCCTCTG +
Preference number: 1 (lower is better)
Translates to: FLLHHMEYGSGNSLL*YREGALYTHWILPL
Trigger: CAGAGGAAGGATCCAGTGAGTGTACAGAGCGCCCTCCCTGTACCACAAAAGACTATTTCCAGATCCATACTCCATGTGATGAAGAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR TCA 90 bp CCACCTCCCAACCATTCATTCCATCGCACTTTGAATTCCCAACATTaGAGCAGGAAGTTTTCATGTTGCCAGGAAGGACATTCCACCATT +
Preference number: 1 (lower is better)
Translates to: PPPNHSFHRTLNSQH*SRKFSCCQEGHSTI
Trigger: AATGGTGGAATGTCCTTCCTGGCAACATGAAAACTTCCTGCTTCAATGTTGGGAATTCAAAGTGCGATGGAATGAATGGTTGGGAGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR TCA 90 bp CTGGGAGAAAATCCCAATTATCTCTATGGCTTGGAACATACATATTaGACACAGTGGAAGATGAGGAGAAAGGTGACAGGTGGCTGTGGA +
Preference number: 1 (lower is better)
Translates to: LGENPNYLYGLEHTY*TQWKMRRKVTGGCG
Trigger: TCCACAGCCACCTGTCACCTTTCTCCTCATCTTCCACTGTGTTCAATATGTATGTTCCAAGCCATAGAGATAATTGGGATTTTCTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR CCA 90 bp CACCTTCAGACACAAAAGTTACAAGTCATACTTCATTGGAATGCTTaGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCC +
Preference number: 1 (lower is better)
Translates to: HLQTQKLQVILHWNA*GKSFPYIYALPLSA
Trigger: GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCAATGAAGTATGACTTGTAACTTTTGTGTCTGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR TCA 90 bp AGGTTTATGCAAAGTGACTCCCTCCCTGAATCCCAGAGCAAACAATaGCAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACA +
Preference number: 1 (lower is better)
Translates to: RFMQSDSLPESQSKQ*QPHLYSYVQQQRYT
Trigger: TGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTCTGGGATTCAGGGAGGGAGTCACTTTGCATAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR TCA 90 bp AATAACCATGTGCCACAGGAAGTAGTTCTATTGACAGACATCAAGTaGGAGTTGGCAAGATGGGTCTTGAAGAAGCAGTCAATCATGACC +
Preference number: 1 (lower is better)
Translates to: NNHVPQEVVLLTDIK*ELARWVLKKQSIMT
Trigger: GGTCATGATTGACTGCTTCTTCAAGACCCATCTTGCCAACTCTCACTTGATGTCTGTCAATAGAACTACTTCCTGTGGCACATGGTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR GCA 90 bp ACACCACCTTCAGACACAAAAGTTACAAGTCATACTTCATTGGAATaGTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTC +
Preference number: 1 (lower is better)
Translates to: TPPSDTKVTSHTSLE*LGQIISLHICPASL
Trigger: GAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCAATGAAGTATGACTTGTAACTTTTGTGTCTGAAGGTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR CCA 90 bp AATCATGACCCACCTGGGGACCTGGAGACCCCAGATGCTAAAGACTaGACCCAAGTAATTCTTCCACATAATCAATTTAAACAACCTTTT +
Preference number: 1 (lower is better)
Translates to: NHDPPGDLETPDAKD*TQVILPHNQFKQPF
Trigger: AAAAGGTTGTTTAAATTGATTATGTGGAAGAATTACTTGGGTCCAGTCTTTAGCATCTGGGGTCTCCAGGTCCCCAGGTGGGTCATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR GCA 90 bp TATTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTaGTTTCATACTACAATGGCAGAGTTGAGTAAATGCAATAGAGCC +
Preference number: 1 (lower is better)
Translates to: YWNAATPIHLHFVCG*FHTTMAELSKCNRA
Trigger: GGCTCTATTGCATTTACTCAACTCTGCCATTGTAGTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR CCA 90 bp AGGAGAAGAAAGAAGCTACCTGGGAGAAAATCCCAATTATCTCTATaGCTTGGAACATACATATTGAACACAGTGGAAGATGAGGAGAAA +
Preference number: 1 (lower is better)
Translates to: RRRKKLPGRKSQLSL*LGTYILNTVEDEEK
Trigger: TTTCTCCTCATCTTCCACTGTGTTCAATATGTATGTTCCAAGCCATAGAGATAATTGGGATTTTCTCCCAGGTAGCTTCTTTCTTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR TCA 90 bp TCCTGCTCCAGATTTAGTAGGATTACACCTCATTTTCACAGCAGTTaGTCGGCCATTAATACAAGATGTTGTTGCTGTAGAAGACTTATA +
Preference number: 1 (lower is better)
Translates to: SCSRFSRITPHFHSS*SAINTRCCCCRRLI
Trigger: TATAAGTCTTCTACAGCAACAACATCTTGTATTAATGGCCGATCAACTGCTGTGAAAATGAGGTGTAATCCTACTAAATCTGGAGCAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR GCA 90 bp GTAGCAGGTCAGAGCCACCAGCAAAACGGCAGTAAAAGCTCCCACACCGGCTCCTACCTGCTGGGCACTTaGTGGGGACTGAAATCACTC +
Preference number: 2 (lower is better)
Translates to: VAGQSHQQNGSKSSHTGSYLLGT*WGLKSL
Trigger: GAGTGATTTCAGTCCCCAGCAAGTGCCCAGCAGGTA...GGAGCCGGTGTGGGAGCTTTTACTGCCGTTTTGCTGGTGGCTCTGACCTGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR TCA 90 bp GGCAGGGGACACACGATGAACCCGACTGTTCAGAACCGAGGGCACAGGCACGGCCCTTCCTCTGAAAATTaGGAGTCGTCTTTACACCTT +
Preference number: 2 (lower is better)
Translates to: GRGHTMNPTVQNRGHRHGPSSEN*ESSLHL
Trigger: AAGGTGTAAAGACGACTCTCAATTTTCAGAGGAAGG...GCCGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGTTCATCGTGTGTCCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp GTAGCAGGTCAGAGCCACCAGCAAAACGGCAGTAAAAGCTCCCACACCGGCTCCTTTCTGGGACACACCTaGCAGTTGAATGAACCTGGT +
Preference number: 2 (lower is better)
Translates to: VAGQSHQQNGSKSSHTGSFLGHT*QLNEPG
Trigger: ACCAGGTTCATTCAACTGCCAGGTGTGTCCCAGAAA...GGAGCCGGTGTGGGAGCTTTTACTGCCGTTTTGCTGGTGGCTCTGACCTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR GCA 90 bp AAGCTCCCACACCGGCTCCCACCTTCAGCCAAAAGTCAACCGTTTCACAGGTTGATATTCAAAGCCAAGTaGAGGCTCCGTTCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: KLPHRLPPSAKSQPFHRLIFKAK*RLRSCW
Trigger: CCAGCAGGAACGGAGCCTGCACTTGGCTTTGAATAT...CAACCTGTGAAACGGTTGACTTTTGGCTGAAGGTGGGAGCCGGTGTGGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR GCA 90 bp GTAGCAGGTCAGAGCCACCAGCAAAACGGCAGTAAAAGCTCCCACACCGGCTCCAGGAAGTTTTCATGTTaGCAGGAAGGACATTCCACC +
Preference number: 2 (lower is better)
Translates to: VAGQSHQQNGSKSSHTGSRKFSC*QEGHST
Trigger: GGTGGAATGTCCTTCCTGGCAACATGAAAACTTCCT...GGAGCCGGTGTGGGAGCTTTTACTGCCGTTTTGCTGGTGGCTCTGACCTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR GCA 90 bp AAGCTCCCACACCGGCTCCCACCTTCAGCCAAAAGTCAACCGTTTCACAGGTTGCGCCACCCCATCAACTaGATTAGTGGCTGTGATAGA +
Preference number: 2 (lower is better)
Translates to: KLPHRLPPSAKSQPFHRLRHPIN*ISGCDR
Trigger: TCTATCACAGCCACTAATGCAGTTGATGGGGTGGCG...CAACCTGTGAAACGGTTGACTTTTGGCTGAAGGTGGGAGCCGGTGTGGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR GCA 90 bp TCCATGATAGCACAACTGTCTGCAGCCGGGAGTTCACACTCTTTTGAGTTAGTCCCCATCACAGGTACCTaGTGGGCACTTGCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: SMIAQLSAAGSSHSFELVPITGT*WALAGD
Trigger: GTCCCCAGCAAGTGCCCAGCAGGTACCTGTGATGGG...GACTAACTCAAAAGAGTGTGAACTCCCGGCTGCAGACAGTTGTGCTATCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGCAAGGAAAACATTCTaGTGTGTACGCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: SPSLFSGMALLCEITNVTARKTF*CVRHPF
Trigger: GAAGGGGTGGCGTACACATCAGAATGTTTTCCTTGC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp AAGCTCCCACACCGGCTCCCACCTTCAGCCAAAAGTCAACCGTTTCACAGGTTGCGTTCCTGCTGGACATaGTCTACATTCTTTGGTTCC +
Preference number: 2 (lower is better)
Translates to: KLPHRLPPSAKSQPFHRLRSCWT*STFFGS
Trigger: GGAACCAAAGAATGTAGACCATGTCCAGCAGGAACG...CAACCTGTGAAACGGTTGACTTTTGGCTGAAGGTGGGAGCCGGTGTGGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR TCA 90 bp ACATTCCTTGCACTGGTTGGTTTCTTTCTCAATGTAGTGGCCTGGAGGGCAGGGAACCTGGTTTGTTGCTaGATGTGCCTGGCTTGCAAG +
Preference number: 2 (lower is better)
Translates to: TFLALVGFFLNVVAWRAGNLVCC*MCLACK
Trigger: CTTGCAAGCCAGGCACATTCAGCAACAAACCAGGTT...CCCTGCCCTCCAGGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp ACATTCCTTGCACTGGTTGGTTTCTTTCTCAATGTAGTGGCCTGGAGGGCAGGGGGAAATAGTCTTTTGTaGTACAGGGAGGGCGCTCTG +
Preference number: 2 (lower is better)
Translates to: TFLALVGFFLNVVAWRAGGNSLL*YREGAL
Trigger: CAGAGCGCCCTCCCTGTACCACAAAAGACTATTTCC...CCCTGCCCTCCAGGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGAACAAAAGTCCCACTaGCATTTTCTGGAGACCATG +
Preference number: 2 (lower is better)
Translates to: SPSLFSGMALLCEITNVTEQKSH*HFLETM
Trigger: CATGGTCTCCAGAAAATGTCAGTGGGACTTTTGTTC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATTGCCAGGGTTCCTCTaGAAGGGTTCATTTCAAATG +
Preference number: 2 (lower is better)
Translates to: SPSLFSGMALLCEITNVTLPGFL*KGSFQM
Trigger: CATTTGAAATGAACCCTTTCAGAGGAACCCTGGCAA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGAGTATGTTTGTGCCTaGTTTCAGCATTACCTGGTA +
Preference number: 2 (lower is better)
Translates to: SPSLFSGMALLCEITNVTEYVCA*FQHYLV
Trigger: TACCAGGTAATGCTGAAATCAGGCACAAACATACTC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR CAA 90 bp ACCTGGCAGTTGAATGAACCTGGTTTGTTGCTGAATGTGCCTGGCTaGCAAGGAAAACATTCTGATGTGTACGCCACCCCTTCAATTGTG +
Preference number: 2 (lower is better)
Translates to: TWQLNEPGLLLNVPG*QGKHSDVYATPSIV
Trigger: CACAATTGAAGGGGTGGCGTACACATCAGAATGTTTTCCTTGCAAGCCAGGCACATTCAGCAACAAACCAGGTTCATTCAACTGCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp AATCCTCTCTTGCAGGCTCCCTCAATCTCATGGAAGTCATGCTCCGTACACAGATGCACATCTGGTATTTaGCTTGTTGGAACTGGGAAC +
Preference number: 2 (lower is better)
Translates to: NPLLQAPSISWKSCSVHRCTSGI*LVGTGN
Trigger: GTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCA...TCTGTGTACGGAGCATGACTTCCATGAGATTGAGGGAGCCTGCAAGAGAGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR CAA 90 bp TCTTTCCTTCTTCATCACATGGAGTATGGATCTGGAAATAGTCTTTaGTGGTACAGGGAGGGCGCTCTGTACACTCACTGGATCCTTCCT +
Preference number: 2 (lower is better)
Translates to: SFLLHHMEYGSGNSL*WYREGALYTHWILP
Trigger: AGGAAGGATCCAGTGAGTGTACAGAGCGCCCTCCCTGTACCACAAAAGACTATTTCCAGATCCATACTCCATGTGATGAAGAAGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR TCA 90 bp AATCCTCTCTTGCAGGCTCCCTCAATCTCATGGAAGTCATGCTCCGTACACAGACATTCCATCGCACTTTaGATTCCCAACATTGAAGCA +
Preference number: 2 (lower is better)
Translates to: NPLLQAPSISWKSCSVHRHSIAL*IPNIEA
Trigger: TGCTTCAATGTTGGGAATTCAAAGTGCGATGGAATG...TCTGTGTACGGAGCATGACTTCCATGAGATTGAGGGAGCCTGCAAGAGAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR GCA 90 bp TCCATGATAGCACAACTGTCTGCAGCCGGGAGTTCACACTCTTTTGAGTTAGTCCAGGTGGACATTCCTTaGACTGGTTGGTTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: SMIAQLSAAGSSHSFELVQVDIP*TGWFLS
Trigger: AGAAAGAAACCAACCAGTGCAAGGAATGTCCACCTG...GACTAACTCAAAAGAGTGTGAACTCCCGGCTGCAGACAGTTGTGCTATCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR GCA 90 bp AATCCTCTCTTGCAGGCTCCCTCAATCTCATGGAAGTCATGCTCCGTACACAGAGAATACAAGCCTCTTTaGCATAGACCTGATGTATGG +
Preference number: 2 (lower is better)
Translates to: NPLLQAPSISWKSCSVHREYKPL*HRPDVW
Trigger: CCATACATCAGGTCTATGGCAAAGAGGCTTGTATTC...TCTGTGTACGGAGCATGACTTCCATGAGATTGAGGGAGCCTGCAAGAGAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp CACCAGCAAAACGGCAGTAAAAGCTCCCACACCGGCTCCCACCTTCAGCCAAAAATGGTCTACATTCTTTaGTTCCATCTGAAAATGTTC +
Preference number: 2 (lower is better)
Translates to: HQQNGSKSSHTGSHLQPKMVYIL*FHLKMF
Trigger: GAACATTTTCAGATGGAACCAAAGAATGTAGACCAT...TTTTGGCTGAAGGTGGGAGCCGGTGTGGGAGCTTTTACTGCCGTTTTGCTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp GACATTCCTTGCACTGGTTGGTTTCTTTCTCAATGTAGTGGCCTGGAGGGCAGGTCCAGTCATAGATGTTaGTGGTTTAAATCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: DIPCTGWFLSQCSGLEGRSSHRC*WFKSWD
Trigger: ATCCCAGGATTTAAACCACCAACATCTATGACTGGA...CCTGCCCTCCAGGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR CAA 90 bp GAAGGGGGCAATCTAATAGCATCTGTGAGATCCTCCCGGCAGATTTaGGGCTCTATCCACTTGTACATTATCTGTGTCTTTCCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: EGGNLIASVRSSRQI*GSIHLYIICVFPSS
Trigger: TGAAGAAGGAAAGACACAGATAATGTACAAGTGGATAGAGCCCAAAATCTGCCGGGAGGATCTCACAGATGCTATTAGATTGCCCCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp GACCTGATGTATGGACAGGTAGGTGTCAGGTGGACATTCCTTGCACTGGTTGGTACCTTATACATTCTTTaGCTCCTTTCTCAGAATAGG +
Preference number: 2 (lower is better)
Translates to: DLMYGQVGVRWTFLALVGTLYIL*LLSQNR
Trigger: CCTATTCTGAGAAAGGAGCCAAAGAATGTATAAGGT...ACCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGTCCATACATCAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp GACCTGATGTATGGACAGGTAGGTGTCAGGTGGACATTCCTTGCACTGGTTGGTAGTCATAGATGTTGGTaGTTTAAATCCTGGGATATG +
Preference number: 2 (lower is better)
Translates to: DLMYGQVGVRWTFLALVGSHRCW*FKSWDM
Trigger: CATATCCCAGGATTTAAACCACCAACATCTATGACT...ACCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGTCCATACATCAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATTGGCTTGTTGGAACTaGGAACATATCTTCTTTTAT +
Preference number: 2 (lower is better)
Translates to: SPSLFSGMALLCEITNVTLACWN*EHIFFY
Trigger: ATAAAAGAAGATATGTTCCCAGTTCCAACAAGCCAA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR CAA 90 bp CCACCTTCAGACACAAAAGTTACAAGTCATACTTCATTGGAATGCTaGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: PPSDTKVTSHTSLEC*GQIISLHICPASLS
Trigger: GCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCAATGAAGTATGACTTGTAACTTTTGTGTCTGAAGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR TCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCATTTTCTGGAGACCATaGAATTACCCCAGTATTTCA +
Preference number: 2 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAIFWRP*NYPSIS
Trigger: TGAAATACTGGGGTAATTTCATGGTCTCCAGAAAAT...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR TCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACTTGACAGACATCAAGTaGGAGTTGGCAAGATGGGTC +
Preference number: 2 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYLTDIK*ELARWV
Trigger: GACCCATCTTGCCAACTCTCACTTGATGTCTGTCAA...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR GCA 90 bp TTGTTCATTAGTCTCAAGGCTACAGCACTGTCTCTTCATATATTTGGGGATCTTTGCAGGCTCCGTTCCTaGTGGACATGGTCTACATTC +
Preference number: 2 (lower is better)
Translates to: LFISLKATALSLHIFGDLCRLRS*WTWSTF
Trigger: GAATGTAGACCATGTCCAGCAGGAACGGAGCCTGCA...AAGATCCCCAAATATATGAAGAGACAGTGCTGTAGCCTTGAGACTAATGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACGAGAAAGGTGACAGGTaGCTGTGGAAGTTTTCTCAC +
Preference number: 2 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYEKGDR*LWKFSH
Trigger: GTGAGAAAACTTCCACAGCCACCTGTCACCTTTCTC...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR TCA 90 bp TTGTTCATTAGTCTCAAGGCTACAGCACTGTCTCTTCATATATTTGGGGATCTTGACACACCTGGCAGTTaGATGAACCTGGTTTGTTGC +
Preference number: 2 (lower is better)
Translates to: LFISLKATALSLHIFGDLDTPGS*MNLVCC
Trigger: GCAACAAACCAGGTTCATTCAACTGCCAGGTGTGTC...AAGATCCCCAAATATATGAAGAGACAGTGCTGTAGCCTTGAGACTAATGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACACTCAGTTTAGGAGTTaGGCCTGTCAACTGCAATCA +
Preference number: 2 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYTQFRS*ACQLQS
Trigger: TGATTGCAGTTGACAGGCCCAACTCCTAAACTGAGT...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR CAA 90 bp CCATCGCACTTTGAATTCCCAACATTGAAGCAGGAAGTTTTCATGTaGCCAGGAAGGACATTCCACCATTTATATTCAAAGCCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: PSHFEFPTLKQEVFM*PGRTFHHLYSKPSA
Trigger: TGCACTTGGCTTTGAATATAAATGGTGGAATGTCCTTCCTGGCAACATGAAAACTTCCTGCTTCAATGTTGGGAATTCAAAGTGCGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR TCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACATTTGGCAAGGTACTTaGCCATGTGATAAGGCAATC +
Preference number: 2 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYIWQGT*PCDKAI
Trigger: GATTGCCTTATCACATGGTCAAGTACCTTGCCAAAT...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR TCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACAATCTCTTCCTGAGTTaGGCTTCATCTTCAGTTGAG +
Preference number: 2 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYNLFLS*ASSSVE
Trigger: CTCAACTGAAGATGAAGCTCAACTCAGGAAGAGATT...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR GCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACGCATATGCTCACATGTaGCTTCCAAATCACACTTGT +
Preference number: 2 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYAYAHM*LPNHTC
Trigger: ACAAGTGTGATTTGGAAGGCACATGTGAGCATATGC...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR CCA 90 bp CTACAGCACTGTCTCTTCATATATTTGGGGATCTTGAGGTTTTCAGTTGAACAGGTTGCTGAATGTGCCTaGCTTGCAAGGAAAACATTC +
Preference number: 2 (lower is better)
Translates to: LQHCLFIYLGILRFSVEQVAECA*LARKTF
Trigger: GAATGTTTTCCTTGCAAGCCAGGCACATTCAGCAAC...CTGTTCAACTGAAAACCTCAAGATCCCCAAATATATGAAGAGACAGTGCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp TTGTTCATTAGTCTCAAGGCTACAGCACTGTCTCTTCATATATTTGGGGATCTTCATAGACCTGATGTATaGACAGGTAGGTGTCAGGTG +
Preference number: 2 (lower is better)
Translates to: LFISLKATALSLHIFGDLHRPDV*TGRCQV
Trigger: CACCTGACACCTACCTGTCCATACATCAGGTCTATG...AAGATCCCCAAATATATGAAGAGACAGTGCTGTAGCCTTGAGACTAATGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACCTTCATTGGAATGCTTaGGGCAAATCATTTCCCTAC +
Preference number: 2 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYLHWNA*GKSFPY
Trigger: GTAGGGAAATGATTTGCCCCAAGCATTCCAATGAAG...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR TCA 90 bp CTACAGCACTGTCTCTTCATATATTTGGGGATCTTGAGGTTTTCAGTTGAACAGCATTTTCACAGCAGTTaGTCGGCCATTAATACAAGA +
Preference number: 2 (lower is better)
Translates to: LQHCLFIYLGILRFSVEQHFHSS*SAINTR
Trigger: TCTTGTATTAATGGCCGATCAACTGCTGTGAAAATG...CTGTTCAACTGAAAACCTCAAGATCCCCAAATATATGAAGAGACAGTGCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR GCA 90 bp TTGTTCATTAGTCTCAAGGCTACAGCACTGTCTCTTCATATATTTGGGGATCTTTATAAAATCCAGGGTTaGAAGGCGGACAATCCTTCT +
Preference number: 2 (lower is better)
Translates to: LFISLKATALSLHIFGDLYKIQG*KADNPS
Trigger: AGAAGGATTGTCCGCCTTGCAACCCTGGATTTTATA...AAGATCCCCAAATATATGAAGAGACAGTGCTGTAGCCTTGAGACTAATGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR GCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACATTAATTATATGGCATaGATCAGCAGTGCATTGGTG +
Preference number: 2 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYINYMA*ISSALV
Trigger: CACCAATGCACTGCTGATGCATGCCATATAATTAAT...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR GCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACCATACTTCATTGGAATaGTTGGGGCAAATCATTTCC +
Preference number: 2 (lower is better)
Translates to: EQTMTTSPILICATAEIYHTSLE*LGQIIS
Trigger: GGAAATGATTTGCCCCAAGCATTCCAATGAAGTATG...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR CCA 90 bp CTACAGCACTGTCTCTTCATATATTTGGGGATCTTGAGGTTTTCAGTTGAACAGAAGCTTGTTTTTCTTTaGTTCCACCCCACGATTCTA +
Preference number: 2 (lower is better)
Translates to: LQHCLFIYLGILRFSVEQKLVFL*FHPTIL
Trigger: TAGAATCGTGGGGTGGAACCAAAGAAAAACAAGCTT...CTGTTCAACTGAAAACCTCAAGATCCCCAAATATATGAAGAGACAGTGCTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACAAGAAAGAAGCTACCTaGGAGAAAATCCCAATTATC +
Preference number: 2 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYKKEAT*EKIPII
Trigger: GATAATTGGGATTTTCTCCCAGGTAGCTTCTTTCTT...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR CAA 90 bp GGACAGACCCTAAAATATGGTCCTGTAAAACTAGAGCAGGTTTCTTaGTTCATTAGTCTCAAGGCTACAGCACTGTCTCTTCATATATTT +
Preference number: 2 (lower is better)
Translates to: GQTLKYGPVKLEQVS*FISLKATALSLHIF
Trigger: AAATATATGAAGAGACAGTGCTGTAGCCTTGAGACTAATGAACAAAGAAACCTGCTCTAGTTTTACAGGACCATATTTTAGGGTCTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR TCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAATAACCTCTGGTGCTTaGCAAAGAACAAAAGTCCCA +
Preference number: 2 (lower is better)
Translates to: TMTTSPILICATAEIYTKITSGA*QRTKVP
Trigger: TGGGACTTTTGTTCTTTGTCAAGCACCAGAGGTTAT...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR GCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACACATCCTCAAAGTCTTaGAGCAGAAAAATAACCATA +
Preference number: 2 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYTSSKS*SRKITI
Trigger: TATGGTTATTTTTCTGCTGCAAGACTTTGAGGATGT...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR CCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACTCCCAATTATCTCTATaGCTTGGAACATACATATTG +
Preference number: 2 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYSQLSL*LGTYIL
Trigger: CAATATGTATGTTCCAAGCCATAGAGATAATTGGGA...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR CCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAACAGCTCCAACGAGGATaGAATTTCAAAGGCAATTAT +
Preference number: 2 (lower is better)
Translates to: TMTTSPILICATAEIYTKQLQRG*NFKGNY
Trigger: ATAATTGCCTTTGAAATTCCATCCTCGTTGGAGCTG...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR CCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACAGGTTTACACGAAATTaGTCAAATCCAACTTCATTC +
Preference number: 2 (lower is better)
Translates to: EQTMTTSPILICATAEIYRFTRN*SNPTSF
Trigger: GAATGAAGTTGGATTTGACCAATTTCGTGTAAACCT...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR GCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAACCATATAACCTCTGGTaGTTGACAAAGAACAAAAGT +
Preference number: 2 (lower is better)
Translates to: TMTTSPILICATAEIYTKPYNLW*LTKNKS
Trigger: ACTTTTGTTCTTTGTCAAGCACCAGAGGTTATATGG...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR TCA 72 bp ACCCGACTGTTCAGAACCGAGGGCACAGGCACGGCATaGGGACGCCACCCCATCAACTGCATTAGTGGCTGT +
Preference number: 3 (lower is better)
Translates to: TRLFRTEGTGTA*GRHPINCISGC
Trigger: ACAGCCACTAATGCAGTTGATGGGGTGGCGTCCTCATGCCGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CAA 90 bp GGACACACGATGAACCCGACTGTTCAGAACCGAGGGCACAGGCACGGCATGAGGTTGAATGAACCTGGTTaGTTGCTGAATGTGCCTGGC +
Preference number: 3 (lower is better)
Translates to: GHTMNPTVQNRGHRHGMRLNEPG*LLNVPG
Trigger: GCCAGGCACATTCAGCAACAAACCAGGTTCATTCAA...CCTCATGCCGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGTTCATCGTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CAA 90 bp GTAGCAGGTCAGAGCCACCAGCAAAACGGCAGTAAAAGCTCCCACACCGGCTCCGGACACACCTGGCAGTaGAATGAACCTGGTTTGTTG +
Preference number: 3 (lower is better)
Translates to: VAGQSHQQNGSKSSHTGSGHTWQ*NEPGLL
Trigger: CAACAAACCAGGTTCATTCAACTGCCAGGTGTGTCC...GGAGCCGGTGTGGGAGCTTTTACTGCCGTTTTGCTGGTGGCTCTGACCTGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR GCA 72 bp CCTCTCTTGCAGGCTCCCTCAATCTCATGGAAGTCATaGTCCGTACACAGAGGGCAAGCTTCAGCACTCTCC +
Preference number: 3 (lower is better)
Translates to: PLLQAPSISWKS*SVHRGQASALS
Trigger: GGAGAGTGCTGAAGCTTGCCCTCTGTGTACGGAGCATGACTTCCATGAGATTGAGGGAGCCTGCAAGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGTACCTGCTGGGCACTaGCTGGGGACTGAAATCACT +
Preference number: 3 (lower is better)
Translates to: SPSLFSGMALLCEITNVTVPAGH*LGTEIT
Trigger: AGTGATTTCAGTCCCCAGCAAGTGCCCAGCAGGTAC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR TCA 72 bp ATCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTaGGATCACCAATGTGACAGGTATGAGGACAGACCC +
Preference number: 3 (lower is better)
Translates to: ISFPFQRHGPPL*DHQCDRYEDRP
Trigger: GGGTCTGTCCTCATACCTGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
3UTR-3UTR CAA 90 bp GTAGCAGGTCAGAGCCACCAGCAAAACGGCAGTAAAAGCTCCCACACCGGCTCCATGCACATCTGGTATTaGGCTTGTTGGAACTGGGAA +
Preference number: 3 (lower is better)
Translates to: VAGQSHQQNGSKSSHTGSMHIWY*ACWNWE
Trigger: TTCCCAGTTCCAACAAGCCAAATACCAGATGTGCAT...GGAGCCGGTGTGGGAGCTTTTACTGCCGTTTTGCTGGTGGCTCTGACCTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR CCA 72 bp ACAGGTAGGTGTCAGGTGGACATTCCTTGCACTGGTTaGTTTCTTTCTCAATGTAGTGGCCTGGAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: TGRCQVDIPCTG*FLSQCSGLEGR
Trigger: CCTGCCCTCCAGGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CAA 90 bp GGACACACGATGAACCCGACTGTTCAGAACCGAGGGCACAGGCACGGCATGAGGATCTTCACCATGTCATaGATGAACCGTCTATTATCT +
Preference number: 3 (lower is better)
Translates to: GHTMNPTVQNRGHRHGMRIFTMS*MNRLLS
Trigger: AGATAATAGACGGTTCATCAATGACATGGTGAAGAT...CCTCATGCCGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGTTCATCGTGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR GCA 72 bp TTTTACTCCCAGGCCCGCATGGAATACAAGCCTCTTTaGCATAGACCTGATGTATGGACAGGTAGGTGTCAG +
Preference number: 3 (lower is better)
Translates to: FYSQARMEYKPL*HRPDVWTGRCQ
Trigger: CTGACACCTACCTGTCCATACATCAGGTCTATGGCAAAGAGGCTTGTATTCCATGCGGGCCTGGGAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACTAGAGCAGGTTTCTTaGTTCATTAGTCTCAAGGCT +
Preference number: 3 (lower is better)
Translates to: SPSLFSGMALLCEITNVTLEQVS*FISLKA
Trigger: AGCCTTGAGACTAATGAACAAAGAAACCTGCTCTAG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
3UTR GCA 72 bp CATTCCACACATACAAGGTTTCCTGAAATCCTCTCTTaGAGGCTCCCTCAATCTCATGGAAGTCATGCTCCG +
Preference number: 3 (lower is better)
Translates to: HSTHTRFPEILS*RLPQSHGSHAP
Trigger: CGGAGCATGACTTCCATGAGATTGAGGGAGCCTGCAAGAGAGGATTTCAGGAAACCTTGTATGTGTGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR CCA 72 bp CTTTTGTGGTACAGGGAGGGCGCTCTGTACACTCACTaGATCCTTCCTCTGAAAATTGAGAGTCGTCTTTAC +
Preference number: 3 (lower is better)
Translates to: LLWYREGALYTH*ILPLKIESRLY
Trigger: GTAAAGACGACTCTCAATTTTCAGAGGAAGGATCCAGTGAGTGTACAGAGCGCCCTCCCTGTACCACAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CAA 90 bp GACCTGATGTATGGACAGGTAGGTGTCAGGTGGACATTCCTTGCACTGGTTGGTGATATGGGTGTAAGCTaGTTTTTCTTTGGTTCCACC +
Preference number: 3 (lower is better)
Translates to: DLMYGQVGVRWTFLALVGDMGVS*FFFGST
Trigger: GGTGGAACCAAAGAAAAACAAGCTTACACCCATATC...ACCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGTCCATACATCAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CAA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCTATAACCTCTGGTGCTaGACAAAGAACAAAAGTCCC +
Preference number: 3 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAYNLWC*TKNKSP
Trigger: GGGACTTTTGTTCTTTGTCAAGCACCAGAGGTTATA...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR CCA 72 bp CCACCTGGGGACCTGGAGACCCCAGATGCTAAAGACTaGACCCAAGTAATTCTTCCACATAATCAATTTAAA +
Preference number: 3 (lower is better)
Translates to: PPGDLETPDAKD*TQVILPHNQFK
Trigger: TTTAAATTGATTATGTGGAAGAATTACTTGGGTCCAGTCTTTAGCATCTGGGGTCTCCAGGTCCCCAGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR CAA 90 bp TCCATGATAGCACAACTGTCTGCAGCCGGGAGTTCACACTCTTTTGAGTTAGTCAAGTCTGTTATATTGTaGGTACAGAGAGCCATCTTC +
Preference number: 3 (lower is better)
Translates to: SMIAQLSAAGSSHSFELVKSVIL*VQRAIF
Trigger: GAAGATGGCTCTCTGTACCAACAATATAACAGACTT...GACTAACTCAAAAGAGTGTGAACTCCCGGCTGCAGACAGTTGTGCTATCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CAA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCGATTTTGCCAGTGATTaGATTGACAAGCTTTCCTAT +
Preference number: 3 (lower is better)
Translates to: WNAWGKSFPYIYALPLSADFASD*IDKLSY
Trigger: ATAGGAAAGCTTGTCAATCAAATCACTGGCAAAATC...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR TCA 72 bp TCCAGCCACCTCCCAACCATTCATTCCATCGCACTTTaGATTCCCAACATTGAAGCAGGAAGTTTTCATGTT +
Preference number: 3 (lower is better)
Translates to: SSHLPTIHSIAL*IPNIEAGSFHV
Trigger: AACATGAAAACTTCCTGCTTCAATGTTGGGAATTCAAAGTGCGATGGAATGAATGGTTGGGAGGTGGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CAA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACTTGGCAAGATGGGTCTaGAAGAAGCAGTCAATCATG +
Preference number: 3 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYLARWV*KKQSIM
Trigger: CATGATTGACTGCTTCTTCAAGACCCATCTTGCCAA...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR GCA 72 bp TGGAAGTTTTCTCACTCTGTCCAGTCTATACAGCTTTaGCAGGGTTCCTCTGAAAGGGTTCATTTCAAATGT +
Preference number: 3 (lower is better)
Translates to: WKFSHSVQSIQL*QGSSERVHFKC
Trigger: ACATTTGAAATGAACCCTTTCAGAGGAACCCTGGCAAAGCTGTATAGACTGGACAGAGTGAGAAAACTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR GCA 72 bp GCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTaGTTTCATACTACAATGGCAGAGTTGAGTAAATGC +
Preference number: 3 (lower is better)
Translates to: AATPIHLHFVCG*FHTTMAELSKC
Trigger: GCATTTACTCAACTCTGCCATTGTAGTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR CAA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACACTTCATTGGAATGCTaGGGGCAAATCATTTCCCTA +
Preference number: 3 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYTSLEC*GQIISL
Trigger: TAGGGAAATGATTTGCCCCAAGCATTCCAATGAAGT...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR CAA 90 bp ACTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATTTTACCAGCACAGGCTaGACCGCCTTAGAACCCATA +
Preference number: 3 (lower is better)
Translates to: TYKRNAHLVFGLLELGTYFTSTG*TALEPI
Trigger: TATGGGTTCTAAGGCGGTCAAGCCTGTGCTGGTAAA...ATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CAA 90 bp CTACAGCACTGTCTCTTCATATATTTGGGGATCTTGAGGTTTTCAGTTGAACAGGAACCGTCTATTATCTaGACCCTGATTAGTTCTCTG +
Preference number: 3 (lower is better)
Translates to: LQHCLFIYLGILRFSVEQEPSII*TLISSL
Trigger: CAGAGAACTAATCAGGGTCAAGATAATAGACGGTTC...CTGTTCAACTGAAAACCTCAAGATCCCCAAATATATGAAGAGACAGTGCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR-3UTR CAA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAGTCATACTTCATaGGAATGCTTGGGGCAAATC +
Preference number: 3 (lower is better)
Translates to: EQTMTTSPILICATAEIYTSHTS*ECLGQI
Trigger: GATTTGCCCCAAGCATTCCAATGAAGTATGACTTGT...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR CAA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACCGAATGAGTCGGGTGTaGAGATTTCTAAAAGTTTAC +
Preference number: 3 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYRMSRV*RFLKVY
Trigger: GTAAACTTTTAGAAATCTCAACACCCGACTCATTCG...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR-3UTR CAA 90 bp CTACAGCACTGTCTCTTCATATATTTGGGGATCTTGAGGTTTTCAGTTGAACAGGTAAAGTCTGTTATATaGTTGGTACAGAGAGCCATC +
Preference number: 3 (lower is better)
Translates to: LQHCLFIYLGILRFSVEQVKSVI*LVQRAI
Trigger: GATGGCTCTCTGTACCAACAATATAACAGACTTTAC...CTGTTCAACTGAAAACCTCAAGATCCCCAAATATATGAAGAGACAGTGCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR GCA 72 bp TCAGACACAAAAGTTACAAGTCATACTTCATTGGAATaGTTGGGGCAAATCATTTCCCTACATATATGCCCT +
Preference number: 3 (lower is better)
Translates to: SDTKVTSHTSLE*LGQIISLHICP
Trigger: AGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCAATGAAGTATGACTTGTAACTTTTGTGTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR CCA 72 bp AAGAAGCTACCTGGGAGAAAATCCCAATTATCTCTATaGCTTGGAACATACATATTGAACACAGTGGAAGAT +
Preference number: 3 (lower is better)
Translates to: KKLPGRKSQLSL*LGTYILNTVED
Trigger: ATCTTCCACTGTGTTCAATATGTATGTTCCAAGCCATAGAGATAATTGGGATTTTCTCCCAGGTAGCTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR TCA 72 bp AGATTTAGTAGGATTACACCTCATTTTCACAGCAGTTaGTCGGCCATTAATACAAGATGTTGTTGCTGTAGA +
Preference number: 3 (lower is better)
Translates to: RFSRITPHFHSS*SAINTRCCCCR
Trigger: TCTACAGCAACAACATCTTGTATTAATGGCCGATCAACTGCTGTGAAAATGAGGTGTAATCCTACTAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR CCA 72 bp CACCTTCAGACACAAAAGTTACAAGTCATACTTCATTaGAATGCTTGGGGCAAATCATTTCCCTACATATAT +
Preference number: 3 (lower is better)
Translates to: HLQTQKLQVILH*NAWGKSFPYIY
Trigger: ATATATGTAGGGAAATGATTTGCCCCAAGCATTCCAATGAAGTATGACTTGTAACTTTTGTGTCTGAAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR GCA 72 bp AGAGCAAACAATGACAACCTCACCTATACTCATATGTaGAACAGCAGAGATATACACAAAACATTCATTCAA +
Preference number: 3 (lower is better)
Translates to: RANNDNLTYTHM*NSRDIHKTFIQ
Trigger: TTGAATGAATGTTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR TCA 72 bp TATCCACAGAAGACATGTTCTCATCCATTGGAAAATTaGTTTAAATACGTTTTGACGAGTGCTAAGAGATGT +
Preference number: 3 (lower is better)
Translates to: YPQKTCSHPLEN*FKYVLTSAKRC
Trigger: ACATCTCTTAGCACTCGTCAAAACGTATTTAAATCAATTTTCCAATGGATGAGAACATGTCTTCTGTGGATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGGGCCGCGACTGCTGTaGGCTCGTCTCGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTGPRLL*ARLAAP
Trigger: CGGAGCGGCGAGACGAGCGCACAGCAGTCGCGGCCC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACTCCCGGGCCGCGACTaGTGTGCGCTCGTCTCGCCG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTLPGRD*CALVSP
Trigger: CGGCGAGACGAGCGCACAGCAGTCGCGGCCCGGGAG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp AAGCTCCCACACCGGCTCCCACCTTCAGCCAAAAGTCAACCGTTTCACAGGTTGGGCACAGGCACGGCATaGGGACGCCACCCCATCAAC +
Preference number: 4 (lower is better)
Translates to: KLPHRLPPSAKSQPFHRLGTGTA*GRHPIN
Trigger: GTTGATGGGGTGGCGTCCTCATGCCGTGCCTGTGCC...CAACCTGTGAAACGGTTGACTTTTGGCTGAAGGTGGGAGCCGGTGTGGGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCCTCCCGGGCCGCGACTaGTGTGCGCTCGTCTCGCCG +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSALPGRD*CALVSP
Trigger: CGGCGAGACGAGCGCACAGCAGTCGCGGCCCGGGAG...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp GGCAGGGGACACACGATGAACCCGACTGTTCAGAACCGAGGGCACAGGCACGGCGCAAGGAAAACATTCTaGTGTGTACGCCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: GRGHTMNPTVQNRGHRHGARKTF*CVRHPF
Trigger: GAAGGGGTGGCGTACACATCAGAATGTTTTCCTTGC...GCCGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGTTCATCGTGTGTCCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGGCACAGGCACGGCATaGGGACGCCACCCCATCAAC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTGTGTA*GRHPIN
Trigger: GTTGATGGGGTGGCGTCCTCATGCCGTGCCTGTGCC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATACAGCCGTCTGGCCTaGTGTCAGAAGGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTYSRLA*CQKGPP
Trigger: TGGTGGGCCCTTCTGACAGCAGGCCAGACGGCTGTA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACCCATCACAGGTACCTaGTGGGCACTTGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTPITGT*WALAGD
Trigger: GTCCCCAGCAAGTGCCCAGCAGGTACCTGTGATGGG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGCCCCACTCTGGATATaGTCTCCAGCCACCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTAPLWI*SPATSQ
Trigger: TTGGGAGGTGGCTGGAGATCATATCCAGAGTGGGGC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GGACACACGATGAACCCGACTGTTCAGAACCGAGGGCACAGGCACGGCATGAGGATCTCATGGAAGTCATaGTCCGTACACAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: GHTMNPTVQNRGHRHGMRISWKS*SVHRGQ
Trigger: TTGCCCTCTGTGTACGGAGCATGACTTCCATGAGAT...CCTCATGCCGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGTTCATCGTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGTTGTTACAGCCGTCTaGCCTGCTGTCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTVVTAV*PAVRRA
Trigger: GGCCCTTCTGACAGCAGGCCAGACGGCTGTAACAAC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACTCAATGTAGTGGCCTaGAGGGCAGGGGACACACGA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTLNVVA*RAGDTR
Trigger: TCGTGTGTCCCCTGCCCTCCAGGCCACTACATTGAG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000450689.7
CDS-3UTR CCA 90 bp AAGCTCCCACACCGGCTCCCACCTTCAGCCAAAAGTCAACCGTTTCACAGGTTGCCCTTTTCAGCGGCATaGCCCTCCTCTGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: KLPHRLPPSAKSQPFHRLPFSAA*PSSVRS
Trigger: TGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGG...CAACCTGTGAAACGGTTGACTTTTGGCTGAAGGTGGGAGCCGGTGTGGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp GACATTCCTTGCACTGGTTGGTTTCTTTCTCAATGTAGTGGCCTGGAGGGCAGGGCAGGGGACACACGATaGACCCGACTGTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: DIPCTGWFLSQCSGLEGRAGDTR*TRLFRT
Trigger: GGTTCTGAACAGTCGGGTTCATCGTGTGTCCCCTGC...CCTGCCCTCCAGGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGCACTTGCTGGGGACTaGAATCACTCCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTALAGD*NHSCSR
Trigger: TCTGGAGCAGGAGTGATTTCAGTCCCCAGCAAGTGC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACATGGCCCTCCTCTGTaGGATCACCAATGTGACAGG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTHGPPL*DHQCDR
Trigger: CCTGTCACATTGGTGATCTCACAGAGGAGGGCCATG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCTACAGCCGTCTGGCCTaGTGTCAGAAGGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAYSRLA*CQKGPP
Trigger: TGGTGGGCCCTTCTGACAGCAGGCCAGACGGCTGTA...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCCCCATCACAGGTACCTaGTGGGCACTTGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAPITGT*WALAGD
Trigger: GTCCCCAGCAAGTGCCCAGCAGGTACCTGTGATGGG...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATTCTTTGCCTCTCACTaGGTCAGGCAGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTFFASH*VRQARA
Trigger: TGCTCTGGCCTGCCTGACCCAGTGAGAGGCAAAGAA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAACTCCCAGGCCCGCATaGAATACAAGCCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTTPRPA*NTSLFA
Trigger: GGCAAAGAGGCTTGTATTCCATGCGGGCCTGGGAGT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACTGCTGGGCACTTGCTaGGGACTGAAATCACTCCTG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTLLGTC*GLKSLL
Trigger: CAGGAGTGATTTCAGTCCCCAGCAAGTGCCCAGCAG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACCCTTTTCAGCGGCATaGCCCTCCTCTGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTPFSAA*PSSVRS
Trigger: TGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp CACCAGCAAAACGGCAGTAAAAGCTCCCACACCGGCTCCCACCTTCAGCCAAAAAAGGAGCTGTCAGAATaGGAGCCCCATTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: HQQNGSKSSHTGSHLQPKKELSE*EPHSPL
Trigger: CAATGGAGAATGGGGCTCTCATTCTGACAGCTCCTT...TTTTGGCTGAAGGTGGGAGCCGGTGTGGGAGCTTTTACTGCCGTTTTGCTGGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATGCAGGCTCCGTTCCTaGTGGACATGGTCTACATTC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTCRLRS*WTWSTF
Trigger: GAATGTAGACCATGTCCAGCAGGAACGGAGCCTGCA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAGGGGACACACGATGAACCCGACTGTTCAGAACCGAGGGCACAGGCACGGCATTAATTATATGGCATaGATCAGCAGTGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: GRGHTMNPTVQNRGHRHGINYMA*ISSALV
Trigger: CACCAATGCACTGCTGATGCATGCCATATAATTAAT...GCCGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGTTCATCGTGTGTCCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAAACCTGGTTTGTTGCTaGATGTGCCTGGCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTNLVCC*MCLACK
Trigger: CTTGCAAGCCAGGCACATTCAGCAACAAACCAGGTT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGACACACCTGGCAGTTaGATGAACCTGGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTDTPGS*MNLVCC
Trigger: GCAACAAACCAGGTTCATTCAACTGCCAGGTGTGTC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGGCACAGGCACGGCATaGGGACGCCACCCCATCAAC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPGTGTA*GRHPIN
Trigger: GTTGATGGGGTGGCGTCCTCATGCCGTGCCTGTGCC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000450689.7
CDS-3UTR TCA 90 bp GGACACACGATGAACCCGACTGTTCAGAACCGAGGGCACAGGCACGGCATGAGGTGGTTGCCAAAGATTTaGGTTTTCCTAGTAGTGACT +
Preference number: 4 (lower is better)
Translates to: GHTMNPTVQNRGHRHGMRWLPKI*VFLVVT
Trigger: AGTCACTACTAGGAAAACTCAAATCTTTGGCAACCA...CCTCATGCCGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGTTCATCGTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACGCCACCCCATCAACTaGATTAGTGGCTGTGATAGA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTRHPIN*ISGCDR
Trigger: TCTATCACAGCCACTAATGCAGTTGATGGGGTGGCG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000450689.7
CDS-3UTR GCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAGGGCCGCGACTGCTGTaGGCTCGTCTCGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKGPRLL*ARLAAP
Trigger: CGGAGCGGCGAGACGAGCGCACAGCAGTCGCGGCCC...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACTGCAGAATTTGGAATaGCAACTCTCCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTLQNLE*QLSTWS
Trigger: GCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCTTCTTTGCCTCTCACTaGGTCAGGCAGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAFFASH*VRQARA
Trigger: TGCTCTGGCCTGCCTGACCCAGTGAGAGGCAAAGAA...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGGAAATAGTCTTTTGTaGTACAGGGAGGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTGNSLL*YREGAL
Trigger: CAGAGCGCCCTCCCTGTACCACAAAAGACTATTTCC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACCAGGAGGACAGGGATaGCAAGAAGATGATCCATTG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTPGGQG*QEDDPL
Trigger: CAATGGATCATCTTCTTGCCATCCCTGTCCTCCTGG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACAGGTAGGTGTCAGGTaGACATTCCTTGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTQVGVR*TFLALV
Trigger: AACCAGTGCAAGGAATGTCCACCTGACACCTACCTG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACAAAACACAGTCAGCTaGACAGAGGGTCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTQNTVS*TEGLKD
Trigger: GTCTTTGAGACCCTCTGTTCAGCTGACTGTGTTTTG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATTGTTCCTTTGGAGGTaGAGCTGGGGCCATTCATTA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTLFLWR*SWGHSL
Trigger: TAATGAATGGCCCCAGCTTCACCTCCAAAGGAACAA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAAGAAAGTGCATTCTTTaGCTCTCACTGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTRKCIL*LSLGQA
Trigger: TGCCTGACCCAGTGAGAGGCAAAGAATGCACTTTCT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGGCATGCATCAGCAGTaGATTGGTGGGCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTGMHQQ*IGGLKL
Trigger: AAGTTTAAGCCCACCAATGCACTGCTGATGCATGCC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACCTACATATATGCCCTaGCTCTCTCAGCCAATCACA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTPTYMP*LSQPIT
Trigger: TGTGATTGGCTGAGAGAGGCAGGGCATATATGTAGG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGTCCACTGCAGAATTTaGAATGGCAACTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTVHCRI*NGNSPP
Trigger: AGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGAC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATTTCTGGGACACACCTaGCAGTTGAATGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTFLGHT*QLNEPG
Trigger: ACCAGGTTCATTCAACTGCCAGGTGTGTCCCAGAAA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACGTTCCTGCTGGACATaGTCTACATTCTTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTRSCWT*STFFGS
Trigger: GGAACCAAAGAATGTAGACCATGTCCAGCAGGAACG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAAGGCTCCGTTCCTGCTaGACATGGTCTACATTCTTT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTRLRSC*TWSTFF
Trigger: AAAGAATGTAGACCATGTCCAGCAGGAACGGAGCCT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACATAGACCTGATGTATaGACAGGTAGGTGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTHRPDV*TGRCQV
Trigger: CACCTGACACCTACCTGTCCATACATCAGGTCTATG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACCCATTCATCAAATTTaGTGCCACTGCCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTPIHQI*CHCPRN
Trigger: ATTCCTTGGGCAGTGGCATCAAATTTGATGAATGGG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATTCAGCATTACAGAATaGGAGCCCCATTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTFSITE*EPHSPL
Trigger: CAATGGAGAATGGGGCTCTCATTCTGTAATGCTGAA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATCCACCTGGAGCCACTaGTATCACATTCCGTATATT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTSTWSH*YHIPYI
Trigger: AATATACGGAATGTGATAGCAGTGGCTCCAGGTGGA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCATATTCAAAGCCAAGTaGAGGCTCCGTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAIFKAK*RLRSCW
Trigger: CCAGCAGGAACGGAGCCTGCACTTGGCTTTGAATAT...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAAGGAAGTTTTCATGTTaGCAGGAAGGACATTCCACC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTRKFSC*QEGHST
Trigger: GGTGGAATGTCCTTCCTGGCAACATGAAAACTTCCT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACAGGTGGACATTCCTTaGACTGGTTGGTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTQVDIP*TGWFLS
Trigger: AGAAAGAAACCAACCAGTGCAAGGAATGTCCACCTG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGCCCATCACAGGTACCTaGTGGGCACTTGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LLTGIQMPLPNLCNHLTLPITGT*WALAGD
Trigger: GTCCCCAGCAAGTGCCCAGCAGGTACCTGTGATGGG...CAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGTTGCTGAATGTGCCTaGCTTGCAAGGAAAACATTC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTVAECA*LARKTF
Trigger: GAATGTTTTCCTTGCAAGCCAGGCACATTCAGCAAC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp CTCTCCAGAAGGGGGCAATCTAATAGCATCTGTGAGATCCTCCCGGCAGATTTTCCTCCCGGCAGATTTTaGGCTCTATCCACTTGTACA +
Preference number: 4 (lower is better)
Translates to: LSRRGQSNSICEILPADFPPGRF*ALSTCT
Trigger: TGTACAAGTGGATAGAGCCCAAAATCTGCCGGGAGG...AAAATCTGCCGGGAGGATCTCACAGATGCTATTAGATTGCCCCCTTCTGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp GACATTCCTTGCACTGGTTGGTTTCTTTCTCAATGTAGTGGCCTGGAGGGCAGGCGTTCCTGCTGGACATaGTCTACATTCTTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: DIPCTGWFLSQCSGLEGRRSCWT*STFFGS
Trigger: GGAACCAAAGAATGTAGACCATGTCCAGCAGGAACG...CCTGCCCTCCAGGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATGCACATCTGGTATTTaGCTTGTTGGAACTGGGAAC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTCTSGI*LVGTGN
Trigger: GTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp CACCAGCAAAACGGCAGTAAAAGCTCCCACACCGGCTCCCACCTTCAGCCAAAAGGGATGGCAAGAAGATaGTCCATTGTTATAAAATCC +
Preference number: 4 (lower is better)
Translates to: HQQNGSKSSHTGSHLQPKGMARR*SIVIKS
Trigger: GGATTTTATAACAATGGATCATCTTCTTGCCATCCC...TTTTGGCTGAAGGTGGGAGCCGGTGTGGGAGCTTTTACTGCCGTTTTGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATTCTTTGGTTCCATCTaGAAATGTTCCAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTFFGSI*KCSRRT
Trigger: TGTCCTCCTGGAACATTTTCAGATGGAACCAAAGAA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACATTCCATCGCACTTTaGATTCCCAACATTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTHSIAL*IPNIEA
Trigger: TGCTTCAATGTTGGGAATTCAAAGTGCGATGGAATG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGCCCCACTCTGGATATaGTCTCCAGCCACCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPAPLWI*SPATSQ
Trigger: TTGGGAGGTGGCTGGAGATCATATCCAGAGTGGGGC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGCAGGGGACACACGATaGACCCGACTGTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPAGDTR*TRLFRT
Trigger: GGTTCTGAACAGTCGGGTTCATCGTGTGTCCCCTGC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAAATCTCTTCCTGAGTTaGGCTTCATCTTCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTNLFLS*ASSSVE
Trigger: CTCAACTGAAGATGAAGCTCAACTCAGGAAGAGATT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATGGTTGTGGTTATTCTaGTGCATCCACACTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTWLWLF*CIHTVL
Trigger: CAAAACAGTGTGGATGCAGCAGAATAACCACAACCA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416314.5
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGATGTTAGAAAATCCTaGCGGCAATTCATCCCATTC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTDVRKS*RQFIPF
Trigger: GAATGGGATGAATTGCCGGCAGGATTTTCTAACATC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATATAAAATCCAGGGTTaGAAGGCGGACAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTYKIQG*KADNPS
Trigger: AGAAGGATTGTCCGCCTTGCAACCCTGGATTTTATA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCCCTGAAATCCTCTCTTaGAGGCTCCCTCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAPEILS*RLPQSH
Trigger: ATGAGATTGAGGGAGCCTGCAAGAGAGGATTTCAGG...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGCATATGCTCACATGTaGCTTCCAAATCACACTTGT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTAYAHM*LPNHTC
Trigger: ACAAGTGTGATTTGGAAGGCACATGTGAGCATATGC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATCAAAATCCTGGTTGTaGTTATTCTGCTGCATCCAC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTSKSWL*LFCCIH
Trigger: GTGGATGCAGCAGAATAACCACAACCAGGATTTTGA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416314.5
CDS-3UTR CCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCGTCCACTGCAGAATTTaGAATGGCAACTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAVHCRI*NGNSPP
Trigger: AGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGAC...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCAGGCTCCGTTCCTGCTaGACATGGTCTACATTCTTT +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSARLRSC*TWSTFF
Trigger: AAAGAATGTAGACCATGTCCAGCAGGAACGGAGCCT...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGGACATTCCTTGCACTaGTTGGTTTCTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTGHSLH*LVSFSM
Trigger: CATTGAGAAAGAAACCAACCAGTGCAAGGAATGTCC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp CTCTCCAGAAGGGGGCAATCTAATAGCATCTGTGAGATCCTCCCGGCAGATTTTCATAGACCTGATGTATaGACAGGTAGGTGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSRRGQSNSICEILPADFHRPDV*TGRCQV
Trigger: CACCTGACACCTACCTGTCCATACATCAGGTCTATG...AAAATCTGCCGGGAGGATCTCACAGATGCTATTAGATTGCCCCCTTCTGGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGGAATAATTGTTGACTaGCATACAAATGCCCCTACC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTGIIVD*HTNAPT
Trigger: GGTAGGGGCATTTGTATGCCAGTCAACAATTATTCC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACCAGATGCTAAAGACTaGACCCAAGTAATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTPDAKD*TQVILP
Trigger: TGGAAGAATTACTTGGGTCCAGTCTTTAGCATCTGG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp GTGGTTTCAACTGTGACTCCTATGAATGTATCTGCCAGAATGATGGATTGTGATGCCCCACTCTGGATATaGTCTCCAGCCACCTCCCAA +
Preference number: 4 (lower is better)
Translates to: VVSTVTPMNVSARMMDCDAPLWI*SPATSQ
Trigger: TTGGGAGGTGGCTGGAGATCATATCCAGAGTGGGGC...ATCACAATCCATCATTCTGGCAGATACATTCATAGGAGTCACAGTTGAAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGCACTTGCTGGGGACTaGAATCACTCCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPALAGD*NHSCSR
Trigger: TCTGGAGCAGGAGTGATTTCAGTCCCCAGCAAGTGC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATGGTTGCCAAAGATTTaGGTTTTCCTAGTAGTGACT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTWLPKI*VFLVVT
Trigger: AGTCACTACTAGGAAAACTCAAATCTTTGGCAACCA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCATGGCCCTCCTCTGTaGGATCACCAATGTGACAGG +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPHGPPL*DHQCDR
Trigger: CCTGTCACATTGGTGATCTCACAGAGGAGGGCCATG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAAGCTTCATCTTCAGTTaGGACCCAAATCATTTGCTT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTSFIFS*DPNHLL
Trigger: AAGCAAATGATTTGGGTCTCAACTGAAGATGAAGCT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCTTGCCAGGGTTCCTCTaGAAGGGTTCATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSALPGFL*KGSFQM
Trigger: CATTTGAAATGAACCCTTTCAGAGGAACCCTGGCAA...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGCATTACCTGGTAATTaGCTTCAAGCATTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTALPGN*LQAFKE
Trigger: CTCCTTAAATGCTTGAAGGCAATTACCAGGTAATGC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCAGGAAGTTTTCATGTTaGCAGGAAGGACATTCCACC +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSARKFSC*QEGHST
Trigger: GGTGGAATGTCCTTCCTGGCAACATGAAAACTTCCT...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCCAGGTGGACATTCCTTaGACTGGTTGGTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAQVDIP*TGWFLS
Trigger: AGAAAGAAACCAACCAGTGCAAGGAATGTCCACCTG...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCCCACTTGTCAGTGGTaGTGTCCATCTCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPPTCQW*CPSPGT
Trigger: AGTGCCAGGAGATGGACACCACCACTGACAAGTGGG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACCCCACTTGTCAGTGGTaGTGTCCATCTCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYPTCQW*CPSPGT
Trigger: AGTGCCAGGAGATGGACACCACCACTGACAAGTGGG...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp AATCCTCTCTTGCAGGCTCCCTCAATCTCATGGAAGTCATGCTCCGTACACAGAGTTGCTGAATGTGCCTaGCTTGCAAGGAAAACATTC +
Preference number: 4 (lower is better)
Translates to: NPLLQAPSISWKSCSVHRVAECA*LARKTF
Trigger: GAATGTTTTCCTTGCAAGCCAGGCACATTCAGCAAC...TCTGTGTACGGAGCATGACTTCCATGAGATTGAGGGAGCCTGCAAGAGAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATCCAGTCATAGATGTTaGTGGTTTAAATCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTSSHRC*WFKSWD
Trigger: ATCCCAGGATTTAAACCACCAACATCTATGACTGGA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAAAGCTTGTTTTTCTTTaGTTCCACCCCACGATTCTA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTKLVFL*FHPTIL
Trigger: TAGAATCGTGGGGTGGAACCAAAGAAAAACAAGCTT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTACTCCCAGGCCCGCATaGAATACAAGCCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPTPRPA*NTSLFA
Trigger: GGCAAAGAGGCTTGTATTCCATGCGGGCCTGGGAGT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp ACATTCCTTGCACTGGTTGGTTTCTTTCTCAATGTAGTGGCCTGGAGGGCAGGGGGAATAATTGTTGACTaGCATACAAATGCCCCTACC +
Preference number: 4 (lower is better)
Translates to: TFLALVGFFLNVVAWRAGGIIVD*HTNAPT
Trigger: GGTAGGGGCATTTGTATGCCAGTCAACAATTATTCC...CCCTGCCCTCCAGGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATGGTATTTGGCTTGTTaGAACTGGGAACATATCTTC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTWYLAC*NWEHIF
Trigger: GAAGATATGTTCCCAGTTCCAACAAGCCAAATACCA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCCCTTTTCAGCGGCATaGCCCTCCTCTGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPPFSAA*PSSVRS
Trigger: TGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACAGCTCCAACGAGGATaGAATTTCAAAGGCAATTAT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTQLQRG*NFKGNY
Trigger: ATAATTGCCTTTGAAATTCCATCCTCGTTGGAGCTG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAATTTGTGTAATCATCTaGCCCTGCCACTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTICVII*PCHYFF
Trigger: AAAGAAATAGTGGCAGGGTCAGATGATTACACAAAT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATATATTTGGGGATCTTaGGGTTTTCAGTTGAACAGA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTYIWGS*GFQLNR
Trigger: TCTGTTCAACTGAAAACCTCAAGATCCCCAAATATA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACAGAAGCAGTCAATCATaGCCCACCTGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYRSSQS*PTWGPG
Trigger: TCCAGGTCCCCAGGTGGGTCATGATTGACTGCTTCT...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp GCTCGGAAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCTGCAGGCTCCGTTCCTaGTGGACATGGTCTACATTC +
Preference number: 4 (lower is better)
Translates to: ARKPLLSEGIIVDWHTNACRLRS*WTWSTF
Trigger: GAATGTAGACCATGTCCAGCAGGAACGGAGCCTGCA...GGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTTCCGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTGCAGGCTCCGTTCCTaGTGGACATGGTCTACATTC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPCRLRS*WTWSTF
Trigger: GAATGTAGACCATGTCCAGCAGGAACGGAGCCTGCA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTACCTGCTGGGCACTTaGTGGGGACTGAAATCACTC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPYLLGT*WGLKSL
Trigger: GAGTGATTTCAGTCCCCAGCAAGTGCCCAGCAGGTA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGGATAGCACAACTGTCTaGAGCCGGGAGTTCACACTC +
Preference number: 4 (lower is better)
Translates to: LLTGIQMPLPNLCNHLTLDSTTV*SREFTL
Trigger: GAGTGTGAACTCCCGGCTGCAGACAGTTGTGCTATC...CAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGATAGCACAACTGTCTaGAGCCGGGAGTTCACACTC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPDSTTV*SREFTL
Trigger: GAGTGTGAACTCCCGGCTGCAGACAGTTGTGCTATC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAATTAATTATATGGCATaGATCAGCAGTGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTINYMA*ISSALV
Trigger: CACCAATGCACTGCTGATGCATGCCATATAATTAAT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp GTGGTTTCAACTGTGACTCCTATGAATGTATCTGCCAGAATGATGGATTGTGATCCCACTTGTCAGTGGTaGTGTCCATCTCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: VVSTVTPMNVSARMMDCDPTCQW*CPSPGT
Trigger: AGTGCCAGGAGATGGACACCACCACTGACAAGTGGG...ATCACAATCCATCATTCTGGCAGATACATTCATAGGAGTCACAGTTGAAACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAACCTTATACATTCTTTaGCTCCTTTCTCAGAATAGG +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTTLYIL*LLSQNR
Trigger: CCTATTCTGAGAAAGGAGCCAAAGAATGTATAAGGT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp ACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGCCACTAGGAAATAGTCTTTTGTaGTACAGGGAGGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: TGIQMPLPNLCNHLTLPLGNSLL*YREGAL
Trigger: CAGAGCGCCCTCCCTGTACCACAAAAGACTATTTCC...TAGTGGCAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATCCTTCTTCATCACATaGAGTATGGATCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTSFFIT*SMDLEI
Trigger: TATTTCCAGATCCATACTCCATGTGATGAAGAAGGA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACCCCTTTTCAGCGGCATaGCCCTCCTCTGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYPFSAA*PSSVRS
Trigger: TGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGG...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR CAA 72 bp TTTCTGGGACACACCTGGCAGTTGAATGAACCTGGTTaGTTGCTGAATGTGCCTGGCTTGCAAGGAAAACAT +
Preference number: 4 (lower is better)
Translates to: FLGHTWQLNEPG*LLNVPGLQGKH
Trigger: ATGTTTTCCTTGCAAGCCAGGCACATTCAGCAACAAACCAGGTTCATTCAACTGCCAGGTGTGTCCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp AAGGCTGCTCGGAAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAGACACACCTGGCAGTTaGATGAACCTGGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: KAARKPLLSEGIIVDWHTDTPGS*MNLVCC
Trigger: GCAACAAACCAGGTTCATTCAACTGCCAGGTGTGTC...TGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTTCCGAGCAGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGACACACCTGGCAGTTaGATGAACCTGGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPDTPGS*MNLVCC
Trigger: GCAACAAACCAGGTTCATTCAACTGCCAGGTGTGTC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAGCCCCACTCTGGATATaGTCTCCAGCCACCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKAPLWI*SPATSQ
Trigger: TTGGGAGGTGGCTGGAGATCATATCCAGAGTGGGGC...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAGCAGGGGACACACGATaGACCCGACTGTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKAGDTR*TRLFRT
Trigger: GGTTCTGAACAGTCGGGTTCATCGTGTGTCCCCTGC...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCTGGTTGCCAAAGATTTaGGTTTTCCTAGTAGTGACT +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAWLPKI*VFLVVT
Trigger: AGTCACTACTAGGAAAACTCAAATCTTTGGCAACCA...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCTTGGAACATACATATTaGACACAGTGGAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSALEHTY*TQWKMR
Trigger: CCTCATCTTCCACTGTGTTCAATATGTATGTTCCAA...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGCCAGAGCAGTCCACTaGAGAATTTGGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPARAVH*RIWNGN
Trigger: GTTGCCATTCCAAATTCTGCAGTGGACTGCTCTGGC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTGCCCAAGGAATAGGTaGCTTCACCACACTTACTGC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPCPRNR*LHHTYC
Trigger: GCAGTAAGTGTGGTGAAGGCACCTATTCCTTGGGCA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTATATTCAAAGCCAAGTaGAGGCTCCGTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPIFKAK*RLRSCW
Trigger: CCAGCAGGAACGGAGCCTGCACTTGGCTTTGAATAT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GTGGTTTCAACTGTGACTCCTATGAATGTATCTGCCAGAATGATGGATTGTGATTACCTGCTGGGCACTTaGTGGGGACTGAAATCACTC +
Preference number: 4 (lower is better)
Translates to: VVSTVTPMNVSARMMDCDYLLGT*WGLKSL
Trigger: GAGTGATTTCAGTCCCCAGCAAGTGCCCAGCAGGTA...ATCACAATCCATCATTCTGGCAGATACATTCATAGGAGTCACAGTTGAAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACGATAGCACAACTGTCTaGAGCCGGGAGTTCACACTC +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYDSTTV*SREFTL
Trigger: GAGTGTGAACTCCCGGCTGCAGACAGTTGTGCTATC...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGAAGAGTGCATTCTTTaGCTCTCACTGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPEECIL*LSLGQA
Trigger: TGCCTGACCCAGTGAGAGGCAAAGAATGCACTCTTC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416314.5
CDS-3UTR GCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAACATCCTCAAAGTCTTaGAGCAGAAAAATAACCATA +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTTSSKS*SRKITI
Trigger: TATGGTTATTTTTCTGCTGCAAGACTTTGAGGATGT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTGGCAACTCTCCACCTaGAGCCACTGCTATCACATT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPWQLST*SHCYHI
Trigger: AATGTGATAGCAGTGGCTCCAGGTGGAGAGTTGCCA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCTGCAGAATTTGGAATaGCAACTCTCCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPLQNLE*QLSTWS
Trigger: GCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACGGAAATAGTCTTTTGTaGTACAGGGAGGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYGNSLL*YREGAL
Trigger: CAGAGCGCCCTCCCTGTACCACAAAAGACTATTTCC...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCCTCCCGGCAGATTTTaGGCTCTATCCACTTGTACA +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPPPGRF*ALSTCT
Trigger: TGTACAAGTGGATAGAGCCCAAAATCTGCCGGGAGG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCCAGGAGGACAGGGATaGCAAGAAGATGATCCATTG +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPPGGQG*QEDDPL
Trigger: CAATGGATCATCTTCTTGCCATCCCTGTCCTCCTGG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAATGGTCTACATTCTTTaGTTCCATCTGAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: SPSLFSGMALLCEITNVTMVYIL*FHLKMF
Trigger: GAACATTTTCAGATGGAACCAAAGAATGTAGACCAT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp CTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATCCTCAATGTAGTGGCCTaGAGGGCAGGGGACACACGA +
Preference number: 4 (lower is better)
Translates to: LIKEMHIWYLACWNWEHILNVVA*RAGDTR
Trigger: TCGTGTGTCCCCTGCCCTCCAGGCCACTACATTGAG...GATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCAGGTAGGTGTCAGGTaGACATTCCTTGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPQVGVR*TFLALV
Trigger: AACCAGTGCAAGGAATGTCCACCTGACACCTACCTG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp ACATTCCTTGCACTGGTTGGTTTCTTTCTCAATGTAGTGGCCTGGAGGGCAGGGAAAGAAATGCACATCTaGTATTTGGCTTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: TFLALVGFFLNVVAWRAGKEMHI*YLACWN
Trigger: GTTCCAACAAGCCAAATACCAGATGTGCATTTCTTT...CCCTGCCCTCCAGGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp CTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGCTGCTGGGCACTTGCTaGGGACTGAAATCACTCCTG +
Preference number: 4 (lower is better)
Translates to: LSEGIIVDWHTNAPTKFVLLGTC*GLKSLL
Trigger: CAGGAGTGATTTCAGTCCCCAGCAAGTGCCCAGCAG...CACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCAAAACACAGTCAGCTaGACAGAGGGTCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPQNTVS*TEGLKD
Trigger: GTCTTTGAGACCCTCTGTTCAGCTGACTGTGTTTTG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGCAAACCGAATGGTCCTaGTTGTTTTTACTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLTGIQMPLPNLCNHLTLQTEWS*LFLLPG
Trigger: GCCTGGGAGTAAAAACAATCAGGACCATTCGGTTTG...CAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCAAACCGAATGGTCCTaGTTGTTTTTACTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPQTEWS*LFLLPG
Trigger: GCCTGGGAGTAAAAACAATCAGGACCATTCGGTTTG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACCAAACCGAATGGTCCTaGTTGTTTTTACTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYQTEWS*LFLLPG
Trigger: GCCTGGGAGTAAAAACAATCAGGACCATTCGGTTTG...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp AATCCTCTCTTGCAGGCTCCCTCAATCTCATGGAAGTCATGCTCCGTACACAGAATTTGTGTAATCATCTaGCCCTGCCACTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: NPLLQAPSISWKSCSVHRICVII*PCHYFF
Trigger: AAAGAAATAGTGGCAGGGTCAGATGATTACACAAAT...TCTGTGTACGGAGCATGACTTCCATGAGATTGAGGGAGCCTGCAAGAGAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAACATGGCCCTCCTCTGTaGGATCACCAATGTGACAGG +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKHGPPL*DHQCDR
Trigger: CCTGTCACATTGGTGATCTCACAGAGGAGGGCCATG...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCGTGCTTGAAATAAAATaGCAAACCACTGGAATCCAA +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAVLEIK*QTTGIQ
Trigger: TTGGATTCCAGTGGTTTGTCATTTTATTTCAAGCAC...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACAGAAAGTGCATTCTTTaGCTCTCACTGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYRKCIL*LSLGQA
Trigger: TGCCTGACCCAGTGAGAGGCAAAGAATGCACTTTCT...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp GTGGTTTCAACTGTGACTCCTATGAATGTATCTGCCAGAATGATGGATTGTGATCGCCACCCCATCAACTaGATTAGTGGCTGTGATAGA +
Preference number: 4 (lower is better)
Translates to: VVSTVTPMNVSARMMDCDRHPIN*ISGCDR
Trigger: TCTATCACAGCCACTAATGCAGTTGATGGGGTGGCG...ATCACAATCCATCATTCTGGCAGATACATTCATAGGAGTCACAGTTGAAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTATCTCATGGAAGTCATaGTCCGTACACAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPISWKS*SVHRGQ
Trigger: TTGCCCTCTGTGTACGGAGCATGACTTCCATGAGAT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GCTCGGAAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTGAAATCCTCTCTTaGAGGCTCCCTCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: ARKPLLSEGIIVDWHTNAPEILS*RLPQSH
Trigger: ATGAGATTGAGGGAGCCTGCAAGAGAGGATTTCAGG...GGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTTCCGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCCTGAAATCCTCTCTTaGAGGCTCCCTCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPPEILS*RLPQSH
Trigger: ATGAGATTGAGGGAGCCTGCAAGAGAGGATTTCAGG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGGCATGCATCAGCAGTaGATTGGTGGGCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPGMHQQ*IGGLKL
Trigger: AAGTTTAAGCCCACCAATGCACTGCTGATGCATGCC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGGGATCCAAGAAGAGTaGATTCTTTGCCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPGIQEE*ILCLSL
Trigger: CAGTGAGAGGCAAAGAATGCACTCTTCTTGGATCCC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416314.5
CDS-3UTR CCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACTGGCAACTCTCCACCTaGAGCCACTGCTATCACATT +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYWQLST*SHCYHI
Trigger: AATGTGATAGCAGTGGCTCCAGGTGGAGAGTTGCCA...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGTCCACTGCAGAATTTaGAATGGCAACTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPVHCRI*NGNSPP
Trigger: AGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGAC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCAGTTGTTACAGCCGTCTaGCCTGCTGTCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSVVTAV*PAVRRA
Trigger: GGCCCTTCTGACAGCAGGCCAGACGGCTGTAACAAC...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp TTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGTTTCTGGGACACACCTaGCAGTTGAATGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: LLTGIQMPLPNLCNHLTLFLGHT*QLNEPG
Trigger: ACCAGGTTCATTCAACTGCCAGGTGTGTCCCAGAAA...CAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTTTCTGGGACACACCTaGCAGTTGAATGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPFLGHT*QLNEPG
Trigger: ACCAGGTTCATTCAACTGCCAGGTGTGTCCCAGAAA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp GACCTGATGTATGGACAGGTAGGTGTCAGGTGGACATTCCTTGCACTGGTTGGTATGGTCTACATTCTTTaGTTCCATCTGAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: DLMYGQVGVRWTFLALVGMVYIL*FHLKMF
Trigger: GAACATTTTCAGATGGAACCAAAGAATGTAGACCAT...ACCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGTCCATACATCAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp AAGGCTGCTCGGAAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAGGCTCCGTTCCTGCTaGACATGGTCTACATTCTTT +
Preference number: 4 (lower is better)
Translates to: KAARKPLLSEGIIVDWHTRLRSC*TWSTFF
Trigger: AAAGAATGTAGACCATGTCCAGCAGGAACGGAGCCT...TGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTTCCGAGCAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTAGGCTCCGTTCCTGCTaGACATGGTCTACATTCTTT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPRLRSC*TWSTFF
Trigger: AAAGAATGTAGACCATGTCCAGCAGGAACGGAGCCT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TCCATGATAGCACAACTGTCTGCAGCCGGGAGTTCACACTCTTTTGAGTTAGTCAAGCTTGTTTTTCTTTaGTTCCACCCCACGATTCTA +
Preference number: 4 (lower is better)
Translates to: SMIAQLSAAGSSHSFELVKLVFL*FHPTIL
Trigger: TAGAATCGTGGGGTGGAACCAAAGAAAAACAAGCTT...GACTAACTCAAAAGAGTGTGAACTCCCGGCTGCAGACAGTTGTGCTATCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACCAGGTAGGTGTCAGGTaGACATTCCTTGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYQVGVR*TFLALV
Trigger: AACCAGTGCAAGGAATGTCCACCTGACACCTACCTG...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCATAGACCTGATGTATaGACAGGTAGGTGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPHRPDV*TGRCQV
Trigger: CACCTGACACCTACCTGTCCATACATCAGGTCTATG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
3UTR CAA 72 bp GTGAGATCCTCCCGGCAGATTTTGGGCTCTATCCACTaGTACATTATCTGTGTCTTTCCTTCTTCATCACAT +
Preference number: 4 (lower is better)
Translates to: VRSSRQILGSIH*YIICVFPSSSH
Trigger: ATGTGATGAAGAAGGAAAGACACAGATAATGTACAAGTGGATAGAGCCCAAAATCTGCCGGGAGGATCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCCCATTCATCAAATTTaGTGCCACTGCCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPPIHQI*CHCPRN
Trigger: ATTCCTTGGGCAGTGGCATCAAATTTGATGAATGGG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp GTGGTTTCAACTGTGACTCCTATGAATGTATCTGCCAGAATGATGGATTGTGATCAAAACACAGTCAGCTaGACAGAGGGTCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: VVSTVTPMNVSARMMDCDQNTVS*TEGLKD
Trigger: GTCTTTGAGACCCTCTGTTCAGCTGACTGTGTTTTG...ATCACAATCCATCATTCTGGCAGATACATTCATAGGAGTCACAGTTGAAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp CTACAGCACTGTCTCTTCATATATTTGGGGATCTTGAGGTTTTCAGTTGAACAGTTGTTCCTTTGGAGGTaGAGCTGGGGCCATTCATTA +
Preference number: 4 (lower is better)
Translates to: LQHCLFIYLGILRFSVEQLFLWR*SWGHSL
Trigger: TAATGAATGGCCCCAGCTTCACCTCCAAAGGAACAA...CTGTTCAACTGAAAACCTCAAGATCCCCAAATATATGAAGAGACAGTGCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACTTGACAGACATCAAGTaGGAGTTGGCAAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYLTDIK*ELARWV
Trigger: GACCCATCTTGCCAACTCTCACTTGATGTCTGTCAA...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCTACAATGGCAGAGTTaGGTAAATGCAATAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPLQWQS*VNAIEP
Trigger: GGGCTCTATTGCATTTACTCAACTCTGCCATTGTAG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTCCACCTGGAGCCACTaGTATCACATTCCGTATATT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPSTWSH*YHIPYI
Trigger: AATATACGGAATGTGATAGCAGTGGCTCCAGGTGGA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTAGGAAGTTTTCATGTTaGCAGGAAGGACATTCCACC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPRKFSC*QEGHST
Trigger: GGTGGAATGTCCTTCCTGGCAACATGAAAACTTCCT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp AAGGCTGCTCGGAAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACACAGGTGGACATTCCTTaGACTGGTTGGTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KAARKPLLSEGIIVDWHTQVDIP*TGWFLS
Trigger: AGAAAGAAACCAACCAGTGCAAGGAATGTCCACCTG...TGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTTCCGAGCAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCAGGTGGACATTCCTTaGACTGGTTGGTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPQVDIP*TGWFLS
Trigger: AGAAAGAAACCAACCAGTGCAAGGAATGTCCACCTG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAATACCTGCTGGGCACTTaGTGGGGACTGAAATCACTC +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKYLLGT*WGLKSL
Trigger: GAGTGATTTCAGTCCCCAGCAAGTGCCCAGCAGGTA...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp AAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCGGCATGCATCAGCAGTaGATTGGTGGGCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: KPLLSEGIIVDWHTNAPTGMHQQ*IGGLKL
Trigger: AAGTTTAAGCCCACCAATGCACTGCTGATGCATGCC...GGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACGGCATGCATCAGCAGTaGATTGGTGGGCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYGMHQQ*IGGLKL
Trigger: AAGTTTAAGCCCACCAATGCACTGCTGATGCATGCC...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACAGAGCCCACATGCCCTaGAAAGCCAAAACTATGTAC +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYRAHMP*KAKTMY
Trigger: GTACATAGTTTTGGCTTTGCAGGGCATGTGGGCTCT...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp TCCATGATAGCACAACTGTCTGCAGCCGGGAGTTCACACTCTTTTGAGTTAGTCTCCTTCTTCATCACATaGAGTATGGATCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: SMIAQLSAAGSSHSFELVSFFIT*SMDLEI
Trigger: TATTTCCAGATCCATACTCCATGTGATGAAGAAGGA...GACTAACTCAAAAGAGTGTGAACTCCCGGCTGCAGACAGTTGTGCTATCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp CTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGCAGGTAGGTGTCAGGTaGACATTCCTTGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: LSEGIIVDWHTNAPTKFVQVGVR*TFLALV
Trigger: AACCAGTGCAAGGAATGTCCACCTGACACCTACCTG...CACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCAACTCCCAGGCCCGCATaGAATACAAGCCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSTPRPA*NTSLFA
Trigger: GGCAAAGAGGCTTGTATTCCATGCGGGCCTGGGAGT...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTGCACATCTGGTATTTaGCTTGTTGGAACTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPCTSGI*LVGTGN
Trigger: GTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCACTGCTGGGCACTTGCTaGGGACTGAAATCACTCCTG +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSLLGTC*GLKSLL
Trigger: CAGGAGTGATTTCAGTCCCCAGCAAGTGCCCAGCAG...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCAGGTTTACACGAAATTaGTCAAATCCAACTTCATTC +
Preference number: 4 (lower is better)
Translates to: WNAWGKSFPYIYALPLSARFTRN*SNPTSF
Trigger: GAATGAAGTTGGATTTGACCAATTTCGTGTAAACCT...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTACTCAGTTTAGGAGTTaGGCCTGTCAACTGCAATCA +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPTQFRS*ACQLQS
Trigger: TGATTGCAGTTGACAGGCCCAACTCCTAAACTGAGT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAAACCTGGTTTGTTGCTaGATGTGCCTGGCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKNLVCC*MCLACK
Trigger: CTTGCAAGCCAGGCACATTCAGCAACAAACCAGGTT...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCCTTCCTCTGAAAATTaGGAGTCGTCTTTACACCTT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPPSSEN*ESSLHL
Trigger: AAGGTGTAAAGACGACTCTCAATTTTCAGAGGAAGG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTTCTTTGGTTCCATCTaGAAATGTTCCAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPFFGSI*KCSRRT
Trigger: TGTCCTCCTGGAACATTTTCAGATGGAACCAAAGAA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCATTCCATCGCACTTTaGATTCCCAACATTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPHSIAL*IPNIEA
Trigger: TGCTTCAATGTTGGGAATTCAAAGTGCGATGGAATG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTATTTGGCAAGGTACTTaGCCATGTGATAAGGCAATC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPIWQGT*PCDKAI
Trigger: GATTGCCTTATCACATGGTCAAGTACCTTGCCAAAT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp TTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGAATCTCTTCCTGAGTTaGGCTTCATCTTCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: LLTGIQMPLPNLCNHLTLNLFLS*ASSSVE
Trigger: CTCAACTGAAGATGAAGCTCAACTCAGGAAGAGATT...CAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACTTCAGCATTACAGAATaGGAGCCCCATTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYFSITE*EPHSPL
Trigger: CAATGGAGAATGGGGCTCTCATTCTGTAATGCTGAA...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACGAACAAAAGTCCCACTaGCATTTTCTGGAGACCATG +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYEQKSH*HFLETM
Trigger: CATGGTCTCCAGAAAATGTCAGTGGGACTTTTGTTC...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACGAGATTTTAGTCCAGTaGCAGGAGAAGAAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYEILVQ*QEKKEA
Trigger: AGCTTCTTTCTTCTCCTGTCACTGGACTAAAATCTC...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTTGTGGTTATTCTGCTaGATCCACACTGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPLWLFC*IHTVLP
Trigger: AGGCAAAACAGTGTGGATGCAGCAGAATAACCACAA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416314.5
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTATAAAATCCAGGGTTaGAAGGCGGACAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPYKIQG*KADNPS
Trigger: AGAAGGATTGTCCGCCTTGCAACCCTGGATTTTATA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAACGCCACCCCATCAACTaGATTAGTGGCTGTGATAGA +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKRHPIN*ISGCDR
Trigger: TCTATCACAGCCACTAATGCAGTTGATGGGGTGGCG...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGAATACAAGCCTCTTTaGCATAGACCTGATGTATGG +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPEYKPL*HRPDVW
Trigger: CCATACATCAGGTCTATGGCAAAGAGGCTTGTATTC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp AAGGCTGCTCGGAAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAGCATATGCTCACATGTaGCTTCCAAATCACACTTGT +
Preference number: 4 (lower is better)
Translates to: KAARKPLLSEGIIVDWHTAYAHM*LPNHTC
Trigger: ACAAGTGTGATTTGGAAGGCACATGTGAGCATATGC...TGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTTCCGAGCAGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAACCTCCCGGCAGATTTTaGGCTCTATCCACTTGTACA +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKPPGRF*ALSTCT
Trigger: TGTACAAGTGGATAGAGCCCAAAATCTGCCGGGAGG...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGGACATTCCTTGCACTaGTTGGTTTCTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPGHSLH*LVSFSM
Trigger: CATTGAGAAAGAAACCAACCAGTGCAAGGAATGTCC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACGGACATTCCTTGCACTaGTTGGTTTCTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYGHSLH*LVSFSM
Trigger: CATTGAGAAAGAAACCAACCAGTGCAAGGAATGTCC...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGGAATAATTGTTGACTaGCATACAAATGCCCCTACC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPGIIVD*HTNAPT
Trigger: GGTAGGGGCATTTGTATGCCAGTCAACAATTATTCC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
3UTR CAA 72 bp AATCTAATAGCATCTGTGAGATCCTCCCGGCAGATTTaGGGCTCTATCCACTTGTACATTATCTGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: NLIASVRSSRQI*GSIHLYIICVF
Trigger: AAAGACACAGATAATGTACAAGTGGATAGAGCCCAAAATCTGCCGGGAGGATCTCACAGATGCTATTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
3UTR CAA 72 bp GACACAAAAGTTACAAGTCATACTTCATTGGAATGCTaGGGGCAAATCATTTCCCTACATATATGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: DTKVTSHTSLEC*GQIISLHICPA
Trigger: GGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCAATGAAGTATGACTTGTAACTTTTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp CTACAGCACTGTCTCTTCATATATTTGGGGATCTTGAGGTTTTCAGTTGAACAGGAGTATGTTTGTGCCTaGTTTCAGCATTACCTGGTA +
Preference number: 4 (lower is better)
Translates to: LQHCLFIYLGILRFSVEQEYVCA*FQHYLV
Trigger: TACCAGGTAATGCTGAAATCAGGCACAAACATACTC...CTGTTCAACTGAAAACCTCAAGATCCCCAAATATATGAAGAGACAGTGCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp TCGGCCATTAATACAAGATGTTGTTGCTGTAGAAGACTTATAAAAGAAATGCACAACCTGGTTTGTTGCTaGATGTGCCTGGCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: SAINTRCCCCRRLIKEMHNLVCC*MCLACK
Trigger: CTTGCAAGCCAGGCACATTCAGCAACAAACCAGGTT...GTGCATTTCTTTTATAAGTCTTCTACAGCAACAACATCTTGTATTAATGGCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCAGACACACCTGGCAGTTaGATGAACCTGGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSDTPGS*MNLVCC
Trigger: GCAACAAACCAGGTTCATTCAACTGCCAGGTGTGTC...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGGGATGGCAAGAAGATaGTCCATTGTTATAAAATCC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPGMARR*SIVIKS
Trigger: GGATTTTATAACAATGGATCATCTTCTTGCCATCCC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp CTACAGCACTGTCTCTTCATATATTTGGGGATCTTGAGGTTTTCAGTTGAACAGCATTCCATCGCACTTTaGATTCCCAACATTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LQHCLFIYLGILRFSVEQHSIAL*IPNIEA
Trigger: TGCTTCAATGTTGGGAATTCAAAGTGCGATGGAATG...CTGTTCAACTGAAAACCTCAAGATCCCCAAATATATGAAGAGACAGTGCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAATTGTTCCTTTGGAGGTaGAGCTGGGGCCATTCATTA +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKLFLWR*SWGHSL
Trigger: TAATGAATGGCCCCAGCTTCACCTCCAAAGGAACAA...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCATTTTCACAGCAGTTaGTCGGCCATTAATACAAGA +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPHFHSS*SAINTR
Trigger: TCTTGTATTAATGGCCGATCAACTGCTGTGAAAATG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp AAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCATTTGGCAAGGTACTTaGCCATGTGATAAGGCAATC +
Preference number: 4 (lower is better)
Translates to: KPLLSEGIIVDWHTNAPTIWQGT*PCDKAI
Trigger: GATTGCCTTATCACATGGTCAAGTACCTTGCCAAAT...GGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTAGCTTCATCTTCAGTTaGGACCCAAATCATTTGCTT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPSFIFS*DPNHLL
Trigger: AAGCAAATGATTTGGGTCTCAACTGAAGATGAAGCT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp GCTCGGAAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCGGACAAGCTTCCTCTTaGAAGTCTTTTTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ARKPLLSEGIIVDWHTNAGQASS*KSFSSH
Trigger: ATGAGAAGAAAAAGACTTTCAAGAGGAAGCTTGTCC...GGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTTCCGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427812.1
CDS-3UTR TCA 90 bp CTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATCCTTCCCCTTATCAACTaGTATTTGGCCCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: LIKEMHIWYLACWNWEHILPLIN*YLALHV
Trigger: GACATGCAGGGCCAAATATCAGTTGATAAGGGGAAG...GATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427812.1
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCTTCACCACACTTACTaGATACCTGGTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPLHHTY*IPGSSF
Trigger: AAATGAAGAACCAGGTATGCAGTAAGTGTGGTGAAG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTAGTGTCCATGAATGTTaGGATGTTAGAAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPSVHEC*DVRKSC
Trigger: GCAGGATTTTCTAACATCGCAACATTCATGGACACT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp TCGGCCATTAATACAAGATGTTGTTGCTGTAGAAGACTTATAAAAGAAATGCACATATTCAAAGCCAAGTaGAGGCTCCGTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SAINTRCCCCRRLIKEMHIFKAK*RLRSCW
Trigger: CCAGCAGGAACGGAGCCTGCACTTGGCTTTGAATAT...GTGCATTTCTTTTATAAGTCTTCTACAGCAACAACATCTTGTATTAATGGCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACGAATACAAGCCTCTTTaGCATAGACCTGATGTATGG +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYEYKPL*HRPDVW
Trigger: CCATACATCAGGTCTATGGCAAAGAGGCTTGTATTC...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTATCTTCTTCCCCTCATaGCCACATAAACTGATATTG +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPIFFPS*PHKLIL
Trigger: CAATATCAGTTTATGTGGGCATGAGGGGAAGAAGAT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACGCATATGCTCACATGTaGCTTCCAAATCACACTTGT +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYAYAHM*LPNHTC
Trigger: ACAAGTGTGATTTGGAAGGCACATGTGAGCATATGC...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAGCAATAGAGCCCACATaGCCTGCAAAGCCAAAACTA +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKAIEPT*PAKPKL
Trigger: TAGTTTTGGCTTTGCAGGGCATGTGGGCTCTATTGC...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTAAAGTTTTATTGGAATaGAGCCACGCCCATCCATTT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPKVLLE*SHAHPF
Trigger: AAATGGATGGGCGTGGCTGCATTCCAATAAAACTTT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp ACTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATCCAGGAGGACAGGGATaGCAAGAAGATGATCCATTG +
Preference number: 4 (lower is better)
Translates to: TYKRNAHLVFGLLELGTYPGGQG*QEDDPL
Trigger: CAATGGATCATCTTCTTGCCATCCCTGTCCTCCTGG...ATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAACGTTCCTGCTGGACATaGTCTACATTCTTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKRSCWT*STFFGS
Trigger: GGAACCAAAGAATGTAGACCATGTCCAGCAGGAACG...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GTGGTTTCAACTGTGACTCCTATGAATGTATCTGCCAGAATGATGGATTGTGATGGACATTCCTTGCACTaGTTGGTTTCTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: VVSTVTPMNVSARMMDCDGHSLH*LVSFSM
Trigger: CATTGAGAAAGAAACCAACCAGTGCAAGGAATGTCC...ATCACAATCCATCATTCTGGCAGATACATTCATAGGAGTCACAGTTGAAACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp CACCTCATTTTCACAGCAGTTGATCGGCCATTAATACAAGATGTTGTTGCTGTAGGAATAATTGTTGACTaGCATACAAATGCCCCTACC +
Preference number: 4 (lower is better)
Translates to: HLIFTAVDRPLIQDVVAVGIIVD*HTNAPT
Trigger: GGTAGGGGCATTTGTATGCCAGTCAACAATTATTCC...TACAGCAACAACATCTTGTATTAATGGCCGATCAACTGCTGTGAAAATGAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTGGTATTTGGCTTGTTaGAACTGGGAACATATCTTC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPWYLAC*NWEHIF
Trigger: GAAGATATGTTCCCAGTTCCAACAAGCCAAATACCA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACTGGTATTTGGCTTGTTaGAACTGGGAACATATCTTC +
Preference number: 4 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYWYLAC*NWEHIF
Trigger: GAAGATATGTTCCCAGTTCCAACAAGCCAAATACCA...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp TTGTTCATTAGTCTCAAGGCTACAGCACTGTCTCTTCATATATTTGGGGATCTTTGCACATCTGGTATTTaGCTTGTTGGAACTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LFISLKATALSLHIFGDLCTSGI*LVGTGN
Trigger: GTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCA...AAGATCCCCAAATATATGAAGAGACAGTGCTGTAGCCTTGAGACTAATGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACCAAGTCATACTTCATTaGAATGCTTGGGGCAAATCA +
Preference number: 4 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYQVILH*NAWGKS
Trigger: TGATTTGCCCCAAGCATTCCAATGAAGTATGACTTG...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCAGGTGACAGGTGGCTGTaGAAGTTTTCTCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSGDRWL*KFSHSV
Trigger: GACAGAGTGAGAAAACTTCCACAGCCACCTGTCACC...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp TCGGCCATTAATACAAGATGTTGTTGCTGTAGAAGACTTATAAAAGAAATGCACTTGTTCCTTTGGAGGTaGAGCTGGGGCCATTCATTA +
Preference number: 4 (lower is better)
Translates to: SAINTRCCCCRRLIKEMHLFLWR*SWGHSL
Trigger: TAATGAATGGCCCCAGCTTCACCTCCAAAGGAACAA...GTGCATTTCTTTTATAAGTCTTCTACAGCAACAACATCTTGTATTAATGGCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTATTTGTGTAATCATCTaGCCCTGCCACTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPICVII*PCHYFF
Trigger: AAAGAAATAGTGGCAGGGTCAGATGATTACACAAAT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR TCA 90 bp CCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAACATTTTCACAGCAGTTaGTCGGCCATTAATACAAGA +
Preference number: 4 (lower is better)
Translates to: PLLSEGIIVDWHTNAPTKHFHSS*SAINTR
Trigger: TCTTGTATTAATGGCCGATCAACTGCTGTGAAAATG...TTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR TCA 90 bp GTGGTTTCAACTGTGACTCCTATGAATGTATCTGCCAGAATGATGGATTGTGATCATTTTCACAGCAGTTaGTCGGCCATTAATACAAGA +
Preference number: 4 (lower is better)
Translates to: VVSTVTPMNVSARMMDCDHFHSS*SAINTR
Trigger: TCTTGTATTAATGGCCGATCAACTGCTGTGAAAATG...ATCACAATCCATCATTCTGGCAGATACATTCATAGGAGTCACAGTTGAAACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR TCA 90 bp GCTCGGAAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCTATATTTGGGGATCTTaGGGTTTTCAGTTGAACAGA +
Preference number: 4 (lower is better)
Translates to: ARKPLLSEGIIVDWHTNAYIWGS*GFQLNR
Trigger: TCTGTTCAACTGAAAACCTCAAGATCCCCAAATATA...GGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTTCCGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTATATTTGGGGATCTTaGGGTTTTCAGTTGAACAGA +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPYIWGS*GFQLNR
Trigger: TCTGTTCAACTGAAAACCTCAAGATCCCCAAATATA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACCTTCACCACACTTACTaGATACCTGGTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYLHHTY*IPGSSF
Trigger: AAATGAAGAACCAGGTATGCAGTAAGTGTGGTGAAG...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp CTACAGCACTGTCTCTTCATATATTTGGGGATCTTGAGGTTTTCAGTTGAACAGATCTTCTTCCCCTCATaGCCACATAAACTGATATTG +
Preference number: 4 (lower is better)
Translates to: LQHCLFIYLGILRFSVEQIFFPS*PHKLIL
Trigger: CAATATCAGTTTATGTGGGCATGAGGGGAAGAAGAT...CTGTTCAACTGAAAACCTCAAGATCCCCAAATATATGAAGAGACAGTGCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACATCTTCTTCCCCTCATaGCCACATAAACTGATATTG +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYIFFPS*PHKLIL
Trigger: CAATATCAGTTTATGTGGGCATGAGGGGAAGAAGAT...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTATTAATTATATGGCATaGATCAGCAGTGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPINYMA*ISSALV
Trigger: CACCAATGCACTGCTGATGCATGCCATATAATTAAT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR GCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAATTTCCCTACATATATaGCCTGCCTCTCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKISLHI*PASLSQ
Trigger: TTGGCTGAGAGAGGCAGGGCATATATGTAGGGAAAT...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCAGCAGAGTTGAGTAAATaGAATAGAGCCCACATGCCC +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSAELSK*NRAHMP
Trigger: GGGCATGTGGGCTCTATTGCATTTACTCAACTCTGC...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCACTTACTGCATACCTaGTTCTTCATTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPHLLHT*FFISRY
Trigger: GTATCTAGAAATGAAGAACCAGGTATGCAGTAAGTG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACCACTTACTGCATACCTaGTTCTTCATTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYHLLHT*FFISRY
Trigger: GTATCTAGAAATGAAGAACCAGGTATGCAGTAAGTG...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp TTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGACCTTATACATTCTTTaGCTCCTTTCTCAGAATAGG +
Preference number: 4 (lower is better)
Translates to: LLTGIQMPLPNLCNHLTLTLYIL*LLSQNR
Trigger: CCTATTCTGAGAAAGGAGCCAAAGAATGTATAAGGT...CAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTACCTTATACATTCTTTaGCTCCTTTCTCAGAATAGG +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPTLYIL*LLSQNR
Trigger: CCTATTCTGAGAAAGGAGCCAAAGAATGTATAAGGT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTAGTCATAGATGTTGGTaGTTTAAATCCTGGGATATG +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPSHRCW*FKSWDM
Trigger: CATATCCCAGGATTTAAACCACCAACATCTATGACT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp CCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAATCCAGTCATAGATGTTaGTGGTTTAAATCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PLLSEGIIVDWHTNAPTKSSHRC*WFKSWD
Trigger: ATCCCAGGATTTAAACCACCAACATCTATGACTGGA...TTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACAAGCTTGTTTTTCTTTaGTTCCACCCCACGATTCTA +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYKLVFL*FHPTIL
Trigger: TAGAATCGTGGGGTGGAACCAAAGAAAAACAAGCTT...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp ACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGCCACTATTGGCTTGTTGGAACTaGGAACATATCTTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: TGIQMPLPNLCNHLTLPLLACWN*EHIFFY
Trigger: ATAAAAGAAGATATGTTCCCAGTTCCAACAAGCCAA...TAGTGGCAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CCA 90 bp CTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATCTGCACATCTGGTATTTaGCTTGTTGGAACTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LIKEMHIWYLACWNWEHICTSGI*LVGTGN
Trigger: GTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCA...GATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTAAAGAAATGCACATCTaGTATTTGGCTTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPKEMHI*YLACWN
Trigger: GTTCCAACAAGCCAAATACCAGATGTGCATTTCTTT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACAAAGAAATGCACATCTaGTATTTGGCTTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYKEMHI*YLACWN
Trigger: GTTCCAACAAGCCAAATACCAGATGTGCATTTCTTT...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCAGAGAAAGGTGACAGGTaGCTGTGGAAGTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSEKGDR*LWKFSH
Trigger: GTGAGAAAACTTCCACAGCCACCTGTCACCTTTCTC...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAACCTCCTTCCCAAAGATaGGACTGTGCTGACAAAATA +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKPPSQR*DCADKI
Trigger: TATTTTGTCAGCACAGTCCCATCTTTGGGAAGGAGG...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAATTCTTTGGTTCCATCTaGAAATGTTCCAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKFFGSI*KCSRRT
Trigger: TGTCCTCCTGGAACATTTTCAGATGGAACCAAAGAA...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAACATTCCATCGCACTTTaGATTCCCAACATTGAAGCA +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKHSIAL*IPNIEA
Trigger: TGCTTCAATGTTGGGAATTCAAAGTGCGATGGAATG...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAATTTGGCAAGGTACTTaGCCATGTGATAAGGCAATC +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKIWQGT*PCDKAI
Trigger: GATTGCCTTATCACATGGTCAAGTACCTTGCCAAAT...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp CTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGAGCTTCATCTTCAGTTaGGACCCAAATCATTTGCTT +
Preference number: 4 (lower is better)
Translates to: LSEGIIVDWHTNAPTKFVSFIFS*DPNHLL
Trigger: AAGCAAATGATTTGGGTCTCAACTGAAGATGAAGCT...CACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCATCCACCTGGAGCCACTaGTATCACATTCCGTATATT +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSSTWSH*YHIPYI
Trigger: AATATACGGAATGTGATAGCAGTGGCTCCAGGTGGA...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp CTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATCGAATACAAGCCTCTTTaGCATAGACCTGATGTATGG +
Preference number: 4 (lower is better)
Translates to: LIKEMHIWYLACWNWEHIEYKPL*HRPDVW
Trigger: CCATACATCAGGTCTATGGCAAAGAGGCTTGTATTC...GATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACCATTTTGTATGTGGTTaGTTTCATACTACAATGGCA +
Preference number: 4 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYHFVCG*FHTTMA
Trigger: TGCCATTGTAGTATGAAAGCAACCACATACAAAATG...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCAGTTGCTGAATGTGCCTaGCTTGCAAGGAAAACATTC +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSVAECA*LARKTF
Trigger: GAATGTTTTCCTTGCAAGCCAGGCACATTCAGCAAC...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACCTTATACATTCTTTaGCTCCTTTCTCAGAATAGG +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYTLYIL*LLSQNR
Trigger: CCTATTCTGAGAAAGGAGCCAAAGAATGTATAAGGT...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACTCCTTCTTCATCACATaGAGTATGGATCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: EQTMTTSPILICATAEIYSFFIT*SMDLEI
Trigger: TATTTCCAGATCCATACTCCATGTGATGAAGAAGGA...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTATGGTCTACATTCTTTaGTTCCATCTGAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPMVYIL*FHLKMF
Trigger: GAACATTTTCAGATGGAACCAAAGAATGTAGACCAT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCATGCACATCTGGTATTTaGCTTGTTGGAACTGGGAAC +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSCTSGI*LVGTGN
Trigger: GTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCA...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR CAA 72 bp TTAGTCTCAAGGCTACAGCACTGTCTCTTCATATATTaGGGGATCTTGAGGTTTTCAGTTGAACAGATTCAA +
Preference number: 4 (lower is better)
Translates to: LVSRLQHCLFIY*GILRFSVEQIQ
Trigger: TTGAATCTGTTCAACTGAAAACCTCAAGATCCCCAAATATATGAAGAGACAGTGCTGTAGCCTTGAGACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp TCGGCCATTAATACAAGATGTTGTTGCTGTAGAAGACTTATAAAAGAAATGCACCCTTCCTCTGAAAATTaGGAGTCGTCTTTACACCTT +
Preference number: 4 (lower is better)
Translates to: SAINTRCCCCRRLIKEMHPSSEN*ESSLHL
Trigger: AAGGTGTAAAGACGACTCTCAATTTTCAGAGGAAGG...GTGCATTTCTTTTATAAGTCTTCTACAGCAACAACATCTTGTATTAATGGCCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp ACTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATTTCTTTGGTTCCATCTaGAAATGTTCCAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: TYKRNAHLVFGLLELGTYFFGSI*KCSRRT
Trigger: TGTCCTCCTGGAACATTTTCAGATGGAACCAAAGAA...ATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR TCA 90 bp CTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGATTTGTGTAATCATCTaGCCCTGCCACTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSEGIIVDWHTNAPTKFVICVII*PCHYFF
Trigger: AAAGAAATAGTGGCAGGGTCAGATGATTACACAAAT...CACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR TCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAAGCTTCATCTTCAGTTaGGACCCAAATCATTTGCTT +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKSFIFS*DPNHLL
Trigger: AAGCAAATGATTTGGGTCTCAACTGAAGATGAAGCT...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp TCGGCCATTAATACAAGATGTTGTTGCTGTAGAAGACTTATAAAAGAAATGCACTATAAAATCCAGGGTTaGAAGGCGGACAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: SAINTRCCCCRRLIKEMHYKIQG*KADNPS
Trigger: AGAAGGATTGTCCGCCTTGCAACCCTGGATTTTATA...GTGCATTTCTTTTATAAGTCTTCTACAGCAACAACATCTTGTATTAATGGCCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR GCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAACATACTTCATTGGAATaGTTGGGGCAAATCATTTCC +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKHTSLE*LGQIIS
Trigger: GGAAATGATTTGCCCCAAGCATTCCAATGAAGTATG...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GTGGTTTCAACTGTGACTCCTATGAATGTATCTGCCAGAATGATGGATTGTGATTTGGCTTGTTGGAACTaGGAACATATCTTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: VVSTVTPMNVSARMMDCDLACWN*EHIFFY
Trigger: ATAAAAGAAGATATGTTCCCAGTTCCAACAAGCCAA...ATCACAATCCATCATTCTGGCAGATACATTCATAGGAGTCACAGTTGAAACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CCA 90 bp CTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATCTGGTATTTGGCTTGTTaGAACTGGGAACATATCTTC +
Preference number: 4 (lower is better)
Translates to: LIKEMHIWYLACWNWEHIWYLAC*NWEHIF
Trigger: GAAGATATGTTCCCAGTTCCAACAAGCCAAATACCA...GATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCACTTCATTGGAATGCTTaGGGCAAATCATTTCCCTAC +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSLHWNA*GKSFPY
Trigger: GTAGGGAAATGATTTGCCCCAAGCATTCCAATGAAG...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
3UTR CAA 72 bp TTACCCATTAATTATATGGCATGCATCAGCAGTGCATaGGTGGGCTTAAACTTGGTTTTCAGTTATGTGTAT +
Preference number: 4 (lower is better)
Translates to: LPINYMACISSA*VGLNLVFSYVY
Trigger: ATACACATAACTGAAAACCAAGTTTAAGCCCACCAATGCACTGCTGATGCATGCCATATAATTAATGGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
3UTR CAA 72 bp GAATTCCATTTTAGCTTCCAACGAATGAGTCGGGTGTaGAGATTTCTAAAAGTTTACTCCTCTAAGGACATT +
Preference number: 4 (lower is better)
Translates to: EFHFSFQRMSRV*RFLKVYSSKDI
Trigger: AATGTCCTTAGAGGAGTAAACTTTTAGAAATCTCAACACCCGACTCATTCGTTGGAAGCTAAAATGGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAATATATTTGGGGATCTTaGGGTTTTCAGTTGAACAGA +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKYIWGS*GFQLNR
Trigger: TCTGTTCAACTGAAAACCTCAAGATCCCCAAATATA...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAATTTTCTGGAGACCATaGAATTACCCCAGTATTTCA +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKIFWRP*NYPSIS
Trigger: TGAAATACTGGGGTAATTTCATGGTCTCCAGAAAAT...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAATTAATTATATGGCATaGATCAGCAGTGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKINYMA*ISSALV
Trigger: CACCAATGCACTGCTGATGCATGCCATATAATTAAT...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAACCTATACTCATATGTaGAACAGCAGAGATATACAC +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKTYTHM*NSRDIH
Trigger: GTGTATATCTCTGCTGTTGCACATATGAGTATAGGT...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCATCCAGTCATAGATGTTaGTGGTTTAAATCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSSSHRC*WFKSWD
Trigger: ATCCCAGGATTTAAACCACCAACATCTATGACTGGA...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR TCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCAATTTGTGTAATCATCTaGCCCTGCCACTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSICVII*PCHYFF
Trigger: AAAGAAATAGTGGCAGGGTCAGATGATTACACAAAT...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR GCA 90 bp CTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATCGTCTTTTTCTTCTCATaGCCACATAAACTGATATTG +
Preference number: 4 (lower is better)
Translates to: LIKEMHIWYLACWNWEHIVFFFS*PHKLIL
Trigger: CAATATCAGTTTATGTGGGCATGAGAAGAAAAAGAC...GATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427812.1
CDS-3UTR CCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAATGGTCTACATTCTTTaGTTCCATCTGAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKMVYIL*FHLKMF
Trigger: GAACATTTTCAGATGGAACCAAAGAATGTAGACCAT...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAATTGGCTTGTTGGAACTaGGAACATATCTTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKLACWN*EHIFFY
Trigger: ATAAAAGAAGATATGTTCCCAGTTCCAACAAGCCAA...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp ACTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATAAAGAAATGCACATCTaGTATTTGGCTTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: TYKRNAHLVFGLLELGTYKEMHI*YLACWN
Trigger: GTTCCAACAAGCCAAATACCAGATGTGCATTTCTTT...ATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CCA 90 bp ACTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATTTATCAACTGATATTTaGCCCTGCATGTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TYKRNAHLVFGLLELGTYLSTDI*PCMSPF
Trigger: AAAAGGAGACATGCAGGGCCAAATATCAGTTGATAA...ATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427812.1
CDS-3UTR CCA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAATCCCAATTATCTCTATaGCTTGGAACATACATATTG +
Preference number: 4 (lower is better)
Translates to: TMTTSPILICATAEIYTKSQLSL*LGTYIL
Trigger: CAATATGTATGTTCCAAGCCATAGAGATAATTGGGA...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CCA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCAAAGAAAGAAGCTACCTaGGAGAAAATCCCAATTATC +
Preference number: 4 (lower is better)
Translates to: EITPVFHTVICTYRQTFSKKEAT*EKIPII
Trigger: GATAATTGGGATTTTCTCCCAGGTAGCTTCTTTCTT...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS CCA 90 bp GCCTCTCACTGGGTCAGGCAGGCCAGAGCAGTCCACTGCAGAATTTaGAATGGCAACTCTCCACCTGGAGCCACTGCTATCACATTCCGT +
Preference number: 5 (lower is better)
Translates to: ASHWVRQARAVHCRI*NGNSPPGATAITFR
Trigger: ACGGAATGTGATAGCAGTGGCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACTGCTCTGGCCTGCCTGACCCAGTGAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398276.6
ENST00000416314.5
ENST00000425689.1
ENST00000444627.5
ENST00000450689.7
CDS GCA 90 bp GCATTCTTTGCCTCTCACTGGGTCAGGCAGGCCAGAGCAGTCCACTaGAGAATTTGGAATGGCAACTCTCCACCTGGAGCCACTGCTATC +
Preference number: 5 (lower is better)
Translates to: AFFASHWVRQARAVH*RIWNGNSPPGATAI
Trigger: GATAGCAGTGGCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACTGCTCTGGCCTGCCTGACCCAGTGAGAGGCAAAGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398276.6
ENST00000416314.5
ENST00000425689.1
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAGGGGACACACGATGAACCCGACTGTTCAGAACCGAGGGCACAGGCACGGCGAACCGTCTATTATCTaGACCCTGATTAGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: GRGHTMNPTVQNRGHRHGEPSII*TLISSL
Trigger: CAGAGAACTAATCAGGGTCAAGATAATAGACGGTTC...GCCGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGTTCATCGTGTGTCCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGGGATCCAAGAAGAGTaGTTACAGCCGTCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTGIQEE*LQPSGL
Trigger: CAGGCCAGACGGCTGTAACAACTCTTCTTGGATCCC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATCCTCCCGGCAGATTTaGGGCTCTATCCACTTGTAC +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTSSRQI*GSIHLY
Trigger: GTACAAGTGGATAGAGCCCAAAATCTGCCGGGAGGA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAGGGGACACACGATGAACCCGACTGTTCAGAACCGAGGGCACAGGCACGGCATATATTTGGGGATCTaGAGGTTTTCAGTTGAACAG +
Preference number: 5 (lower is better)
Translates to: GRGHTMNPTVQNRGHRHGIYLGI*RFSVEQ
Trigger: CTGTTCAACTGAAAACCTCAAGATCCCCAAATATAT...GCCGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGTTCATCGTGTGTCCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAAGAAGAGTGCATTCTTaGCCTCTCACTGGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTRRVHS*PLTGSG
Trigger: GCCTGACCCAGTGAGAGGCAAAGAATGCACTCTTCT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416314.5
CDS CCA 90 bp TCACTGGGTCAGGCAGGCCAGAGCAGTCCACTGCAGAATTTGGAATaGCAACTCTCCACCTGGAGCCACTGCTATCACATTCCGTATATT +
Preference number: 5 (lower is better)
Translates to: SLGQAGQSSPLQNLE*QLSTWSHCYHIPYI
Trigger: AATATACGGAATGTGATAGCAGTGGCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACTGCTCTGGCCTGCCTGACCCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398276.6
ENST00000416314.5
ENST00000425689.1
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAAGTCCACTGCAGAATTaGGAATGGCAACTCTCCACC +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTSPLQN*EWQLST
Trigger: GGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATTTACCAGCACAGGCTaGACCGCCTTAGAACCCATA +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTFTSTG*TALEPI
Trigger: TATGGGTTCTAAGGCGGTCAAGCCTGTGCTGGTAAA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGGACACACCTGGCAGTaGAATGAACCTGGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTGHTWQ*NEPGLL
Trigger: CAACAAACCAGGTTCATTCAACTGCCAGGTGTGTCC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GGACACACGATGAACCCGACTGTTCAGAACCGAGGGCACAGGCACGGCATGAGGTTGGGCTCTATCCACTaGTACATTATCTGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: GHTMNPTVQNRGHRHGMRLGSIH*YIICVF
Trigger: AAAGACACAGATAATGTACAAGTGGATAGAGCCCAA...CCTCATGCCGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGTTCATCGTGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCGTACCTGCTGGGCACTaGCTGGGGACTGAAATCACT +
Preference number: 5 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAVPAGH*LGTEIT
Trigger: AGTGATTTCAGTCCCCAGCAAGTGCCCAGCAGGTAC...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATGCATCCACACTGTTTaGCCTCCCTCACTGTGTCAA +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTCIHTV*PPSLCQ
Trigger: TTGACACAGTGAGGGAGGCAAAACAGTGTGGATGCA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416314.5
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGTAAGTTTTACCCACTaGTCAGTGGTGGTGTCCATC +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTVSFTH*SVVVSI
Trigger: GATGGACACCACCACTGACAAGTGGGTAAAACTTAC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATTGAATGAACCTGGTTaGTTGCTGAATGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTLNEPG*LLNVPG
Trigger: GCCAGGCACATTCAGCAACAAACCAGGTTCATTCAA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GACCTGATGTATGGACAGGTAGGTGTCAGGTGGACATTCCTTGCACTGGTTGGTGGACACACCTGGCAGTaGAATGAACCTGGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: DLMYGQVGVRWTFLALVGGHTWQ*NEPGLL
Trigger: CAACAAACCAGGTTCATTCAACTGCCAGGTGTGTCC...ACCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGTCCATACATCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATCCCATTCATCAAATTaGATGCCACTGCCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTSHSSN*MPLPKE
Trigger: TTCCTTGGGCAGTGGCATCAAATTTGATGAATGGGA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCTTTACCAGCACAGGCTaGACCGCCTTAGAACCCATA +
Preference number: 5 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAFTSTG*TALEPI
Trigger: TATGGGTTCTAAGGCGGTCAAGCCTGTGCTGGTAAA...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAATGCCCCTACCAAATTaGTGTAATCATCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTMPLPN*CNHLTL
Trigger: CAGGGTCAGATGATTACACAAATTTGGTAGGGGCAT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAATGCACATCTGGTATTaGGCTTGTTGGAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTMHIWY*ACWNWE
Trigger: TTCCCAGTTCCAACAAGCCAAATACCAGATGTGCAT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS GCA 90 bp GCTGATTGTTTTTACTCCCAGGCCCGCATGGAATACAAGCCTCTTTaGCATAGACCTGATGTATGGACAGGTAGGTGTCAGGTGGACATT +
Preference number: 5 (lower is better)
Translates to: ADCFYSQARMEYKPL*HRPDVWTGRCQVDI
Trigger: AATGTCCACCTGACACCTACCTGTCCATACATCAGGTCTATGGCAAAGAGGCTTGTATTCCATGCGGGCCTGGGAGTAAAAACAATCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444627.5
CDS-3UTR CAA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCGTAAGTTTTACCCACTaGTCAGTGGTGGTGTCCATC +
Preference number: 5 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAVSFTH*SVVVSI
Trigger: GATGGACACCACCACTGACAAGTGGGTAAAACTTAC...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCTTGAATGAACCTGGTTaGTTGCTGAATGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: WNAWGKSFPYIYALPLSALNEPG*LLNVPG
Trigger: GCCAGGCACATTCAGCAACAAACCAGGTTCATTCAA...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGATATGGGTGTAAGCTaGTTTTTCTTTGGTTCCACC +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTDMGVS*FFFGST
Trigger: GGTGGAACCAAAGAAAAACAAGCTTACACCCATATC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp CACCAGCAAAACGGCAGTAAAAGCTCCCACACCGGCTCCCACCTTCAGCCAAAAAAGTCTGTTATATTGTaGGTACAGAGAGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: HQQNGSKSSHTGSHLQPKKSVIL*VQRAIF
Trigger: GAAGATGGCTCTCTGTACCAACAATATAACAGACTT...TTTTGGCTGAAGGTGGGAGCCGGTGTGGGAGCTTTTACTGCCGTTTTGCTGGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACTGGTATTTGGCTTGTaGGAACTGGGAACATATCTT +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTLVFGL*ELGTYL
Trigger: AAGATATGTTCCCAGTTCCAACAAGCCAAATACCAG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACATCTGGTATTTGGCTaGTTGGAACTGGGAACATAT +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTHLVFG*LELGTY
Trigger: ATATGTTCCCAGTTCCAACAAGCCAAATACCAGATG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCCAACCGTTTCACAGGTaGCCAACTTTTTCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAQPFHR*PTFSQA
Trigger: TGCCTGAGAAAAAGTTGGCAACCTGTGAAACGGTTG...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAGAGCTTCATCTTCAGTaGAGACCCAAATCATTTGCT +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTELHLQ*RPKSFA
Trigger: AGCAAATGATTTGGGTCTCAACTGAAGATGAAGCTC...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATATAACCTCTGGTGCTaGACAAAGAACAAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTYNLWC*TKNKSP
Trigger: GGGACTTTTGTTCTTTGTCAAGCACCAGAGGTTATA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS GCA 90 bp CATAGACCTGATGTATGGACAGGTAGGTGTCAGGTGGACATTCCTTaGACTGGTTGGTTTCTTTCTCAATGTAGTGGCATCTTGACCCTG +
Preference number: 5 (lower is better)
Translates to: HRPDVWTGRCQVDIP*TGWFLSQCSGILTL
Trigger: CAGGGTCAAGATGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGTCCATACATCAGGTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444627.5
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGGGATCCAAGAAGAGTaGTTACAGCCGTCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPGIQEE*LQPSGL
Trigger: CAGGCCAGACGGCTGTAACAACTCTTCTTGGATCCC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATCAAAGAAGATGTTGTaGTCGACATACTGGTACTCA +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTSKKML*STYWYS
Trigger: TGAGTACCAGTATGTCGACAACAACATCTTCTTTGA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAAACTCAAAGAAGATGTaGTTGTCGACATACTGGTAC +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTNSKKM*LSTYWY
Trigger: GTACCAGTATGTCGACAACAACATCTTCTTTGAGTT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATCCAGTAGAGTATGTTaGTGCCTGATTTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTSSRVC*CLISAL
Trigger: TAATGCTGAAATCAGGCACAAACATACTCTACTGGA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATTGGGCTCTATCCACTaGTACATTATCTGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTLGSIH*YIICVF
Trigger: AAAGACACAGATAATGTACAAGTGGATAGAGCCCAA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GACATTCCTTGCACTGGTTGGTTTCTTTCTCAATGTAGTGGCCTGGAGGGCAGGGATATGGGTGTAAGCTaGTTTTTCTTTGGTTCCACC +
Preference number: 5 (lower is better)
Translates to: DIPCTGWFLSQCSGLEGRDMGVS*FFFGST
Trigger: GGTGGAACCAAAGAAAAACAAGCTTACACCCATATC...CCTGCCCTCCAGGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAAAGTCTGTTATATTGTaGGTACAGAGAGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTKSVIL*VQRAIF
Trigger: GAAGATGGCTCTCTGTACCAACAATATAACAGACTT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGGTACCTGCTGGGCACTaGCTGGGGACTGAAATCACT +
Preference number: 5 (lower is better)
Translates to: LLTGIQMPLPNLCNHLTLVPAGH*LGTEIT
Trigger: AGTGATTTCAGTCCCCAGCAAGTGCCCAGCAGGTAC...CAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACATGGTCTTCTTTTTCCTaGGTTGCCAAAGATTTGAGT +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTWSSFS*VAKDLS
Trigger: ACTCAAATCTTTGGCAACCAAGGAAAAAGAAGACCA...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS CCA 90 bp GGCCAGAGCAGTCCACTGCAGAATTTGGAATGGCAACTCTCCACCTaGAGCCACTGCTATCACATTCCGTATATTCAAAGTGATAATCTT +
Preference number: 5 (lower is better)
Translates to: GQSSPLQNLEWQLST*SHCYHIPYIQSDNL
Trigger: AAGATTATCACTTTGAATATACGGAATGTGATAGCAGTGGCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACTGCTCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398276.6
ENST00000416314.5
ENST00000425689.1
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGAGAAAGTGCATTCTTaGCCTCTCACTGGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPEKVHS*PLTGSG
Trigger: GCCTGACCCAGTGAGAGGCAAAGAATGCACTTTCTC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACGAGAAAGTGCATTCTTaGCCTCTCACTGGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYEKVHS*PLTGSG
Trigger: GCCTGACCCAGTGAGAGGCAAAGAATGCACTTTCTC...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTCCTCCCGGCAGATTTaGGGCTCTATCCACTTGTAC +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPSSRQI*GSIHLY
Trigger: GTACAAGTGGATAGAGCCCAAAATCTGCCGGGAGGA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACACATGGTCTACATTCTTaGGTTCCATCTGAAAATGTT +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTHGLHS*VPSENV
Trigger: AACATTTTCAGATGGAACCAAAGAATGTAGACCATG...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TCTCCTTCCCTTTTCAGCGGCATGGCCCTCCTCTGTGAGATCACCAATGTGACAATCTTCACCATGTCATaGATGAACCGTCTATTATCT +
Preference number: 5 (lower is better)
Translates to: SPSLFSGMALLCEITNVTIFTMS*MNRLLS
Trigger: AGATAATAGACGGTTCATCAATGACATGGTGAAGAT...TGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000450689.7
CDS-3UTR CAA 90 bp CTCTCCAGAAGGGGGCAATCTAATAGCATCTGTGAGATCCTCCCGGCAGATTTTCATCTGGTATTTGGCTaGTTGGAACTGGGAACATAT +
Preference number: 5 (lower is better)
Translates to: LSRRGQSNSICEILPADFHLVFG*LELGTY
Trigger: ATATGTTCCCAGTTCCAACAAGCCAAATACCAGATG...AAAATCTGCCGGGAGGATCTCACAGATGCTATTAGATTGCCCCCTTCTGGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS TCA 90 bp TTATTCTGCTGCATCCACACTGTTTTGCCTCCCTCACTGTGTCAATaGCAAGTGAGAATAGAAACATCAAGCCACATCACCATGCGGACA +
Preference number: 5 (lower is better)
Translates to: LFCCIHTVLPPSLCQ*QVRIETSSHITMRT
Trigger: TGTCCGCATGGTGATGTGGCTTGATGTTTCTATTCTCACTTGTCATTGACACAGTGAGGGAGGCAAAACAGTGTGGATGCAGCAGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425689.1
CDS GCA 90 bp AGTCCACTGCAGAATTTGGAATGGCAACTCTCCACCTGGAGCCACTaGTATCACATTCCGTATATTCAAAGTGATAATCTTTCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SPLQNLEWQLSTWSH*YHIPYIQSDNLSPG
Trigger: GCCAGGAGAAAGATTATCACTTTGAATATACGGAATGTGATAGCAGTGGCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444627.5
ENST00000450689.7
CDS CCA 90 bp GATGTATGGACAGGTAGGTGTCAGGTGGACATTCCTTGCACTGGTTaGTTTCTTTCTCAATGTAGTGGCATCTTGACCCTGATTAGTTCT +
Preference number: 5 (lower is better)
Translates to: DVWTGRCQVDIPCTG*FLSQCSGILTLISS
Trigger: AGAACTAATCAGGGTCAAGATGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGTCCATACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444627.5
CDS-3UTR CAA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACAGTCCACTGCAGAATTaGGAATGGCAACTCTCCACC +
Preference number: 5 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYSPLQN*EWQLST
Trigger: GGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACT...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACGGACACACCTGGCAGTaGAATGAACCTGGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYGHTWQ*NEPGLL
Trigger: CAACAAACCAGGTTCATTCAACTGCCAGGTGTGTCC...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp AAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCTCCTCCCGGCAGATTTaGGGCTCTATCCACTTGTAC +
Preference number: 5 (lower is better)
Translates to: KPLLSEGIIVDWHTNAPTSSRQI*GSIHLY
Trigger: GTACAAGTGGATAGAGCCCAAAATCTGCCGGGAGGA...GGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACTCCTCCCGGCAGATTTaGGGCTCTATCCACTTGTAC +
Preference number: 5 (lower is better)
Translates to: EQTMTTSPILICATAEIYSSRQI*GSIHLY
Trigger: GTACAAGTGGATAGAGCCCAAAATCTGCCGGGAGGA...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GACCTGATGTATGGACAGGTAGGTGTCAGGTGGACATTCCTTGCACTGGTTGGTCATGGTCTACATTCTTaGGTTCCATCTGAAAATGTT +
Preference number: 5 (lower is better)
Translates to: DLMYGQVGVRWTFLALVGHGLHS*VPSENV
Trigger: AACATTTTCAGATGGAACCAAAGAATGTAGACCATG...ACCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGTCCATACATCAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp GACCTGATGTATGGACAGGTAGGTGTCAGGTGGACATTCCTTGCACTGGTTGGTATCTTCACCATGTCATaGATGAACCGTCTATTATCT +
Preference number: 5 (lower is better)
Translates to: DLMYGQVGVRWTFLALVGIFTMS*MNRLLS
Trigger: AGATAATAGACGGTTCATCAATGACATGGTGAAGAT...ACCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGTCCATACATCAGGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp TGGAATGCTTGGGGCAAATCATTTCCCTACATATATGCCCTGCCTCTCTCAGCCGTAAAGTCTGTTATATaGTTGGTACAGAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: WNAWGKSFPYIYALPLSAVKSVI*LVQRAI
Trigger: GATGGCTCTCTGTACCAACAATATAACAGACTTTAC...GGCTGAGAGAGGCAGGGCATATATGTAGGGAAATGATTTGCCCCAAGCATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS TCA 90 bp GAAGATGTTGTTGTCGACATACTGGTACTCAAAGAAGACATAGCCTaGCTTCTTAAGGTGCACAGCATAGATCAAAGACACCGTGCAGTC +
Preference number: 5 (lower is better)
Translates to: EDVVVDILVLKEDIA*LLKVHSIDQRHRAV
Trigger: GACTGCACGGTGTCTTTGATCTATGCTGTGCACCTTAAGAAGTCAGGCTATGTCTTCTTTGAGTACCAGTATGTCGACAACAACATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394714.6
ENST00000398276.6
ENST00000416314.5
ENST00000423294.5
ENST00000444627.5
ENST00000450689.7
CDS TCA 90 bp TCCAAGCTTCAGGTTTCAACTGACTGCATAAGTGATTTGATACACTaGGAACCAGACAAGGTTGCCCCTGGTGGAGAAATCTGCCAATAT +
Preference number: 5 (lower is better)
Translates to: SKLQVSTDCISDLIH*EPDKVAPGGEICQY
Trigger: ATATTGGCAGATTTCTCCACCAGGGGCAACCTTGTCTGGTTCTCAGTGTATCAAATCACTTATGCAGTCAGTTGAAACCTGAAGCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470853.1
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGAGCCCCATTCTCCATaGTCTGTAAGTTTTACCCAC +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPEPHSP*SVSFTH
Trigger: GTGGGTAAAACTTACAGACAATGGAGAATGGGGCTC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTCAGGTGGACATTCCTaGCACTGGTTGGTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPSGGHS*HWLVSF
Trigger: GAAAGAAACCAACCAGTGCAAGGAATGTCCACCTGA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACTCAGGTGGACATTCCTaGCACTGGTTGGTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYSGGHS*HWLVSF
Trigger: GAAAGAAACCAACCAGTGCAAGGAATGTCCACCTGA...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCAACCGTTTCACAGGTaGCCAACTTTTTCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPQPFHR*PTFSQA
Trigger: TGCCTGAGAAAAAGTTGGCAACCTGTGAAACGGTTG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTGCATCAGCAGTGCATaGGTGGGCTTAAACTTGGTT +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPCISSA*VGLNLV
Trigger: AACCAAGTTTAAGCCCACCAATGCACTGCTGATGCA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS TCA 90 bp ACCCATAAGGATGCCTGTAGTTCTCCAGTAGAGTATGTTTGTGCCTaGTTTCAGCATTACCTGGTAATTGCCTTCAAGCATTTAAGGAGC +
Preference number: 5 (lower is better)
Translates to: THKDACSSPVEYVCA*FQHYLVIAFKHLRS
Trigger: GCTCCTTAAATGCTTGAAGGCAATTACCAGGTAATGCTGAAATCAGGCACAAACATACTCTACTGGAGAACTACAGGCATCCTTATGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp CTACAGCACTGTCTCTTCATATATTTGGGGATCTTGAGGTTTTCAGTTGAACAGGAGCCCCATTCTCCATaGTCTGTAAGTTTTACCCAC +
Preference number: 5 (lower is better)
Translates to: LQHCLFIYLGILRFSVEQEPHSP*SVSFTH
Trigger: GTGGGTAAAACTTACAGACAATGGAGAATGGGGCTC...CTGTTCAACTGAAAACCTCAAGATCCCCAAATATATGAAGAGACAGTGCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp CTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGTTTACCAGCACAGGCTaGACCGCCTTAGAACCCATA +
Preference number: 5 (lower is better)
Translates to: LSEGIIVDWHTNAPTKFVFTSTG*TALEPI
Trigger: TATGGGTTCTAAGGCGGTCAAGCCTGTGCTGGTAAA...CACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp CCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAATCAGGTGGACATTCCTaGCACTGGTTGGTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: PLLSEGIIVDWHTNAPTKSGGHS*HWLVSF
Trigger: GAAAGAAACCAACCAGTGCAAGGAATGTCCACCTGA...TTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp TTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGATGCCCCTACCAAATTaGTGTAATCATCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: LLTGIQMPLPNLCNHLTLMPLPN*CNHLTL
Trigger: CAGGGTCAGATGATTACACAAATTTGGTAGGGGCAT...CAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTATGCACATCTGGTATTaGGCTTGTTGGAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPMHIWY*ACWNWE
Trigger: TTCCCAGTTCCAACAAGCCAAATACCAGATGTGCAT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGATGCACATCTGGTATTaGGCTTGTTGGAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: LLTGIQMPLPNLCNHLTLMHIWY*ACWNWE
Trigger: TTCCCAGTTCCAACAAGCCAAATACCAGATGTGCAT...CAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCAATGTAGTGGCATCTaGACCCTGATTAGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPQCSGI*TLISSL
Trigger: CAGAGAACTAATCAGGGTCAAGATGCCACTACATTG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444627.5
CDS-3UTR CAA 90 bp TTGTTCATTAGTCTCAAGGCTACAGCACTGTCTCTTCATATATTTGGGGATCTTGTAAGTTTTACCCACTaGTCAGTGGTGGTGTCCATC +
Preference number: 5 (lower is better)
Translates to: LFISLKATALSLHIFGDLVSFTH*SVVVSI
Trigger: GATGGACACCACCACTGACAAGTGGGTAAAACTTAC...AAGATCCCCAAATATATGAAGAGACAGTGCTGTAGCCTTGAGACTAATGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGATATGGGTGTAAGCTaGTTTTTCTTTGGTTCCACC +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPDMGVS*FFFGST
Trigger: GGTGGAACCAAAGAAAAACAAGCTTACACCCATATC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGAACCGTCTATTATCTaGACCCTGATTAGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPEPSII*TLISSL
Trigger: CAGAGAACTAATCAGGGTCAAGATAATAGACGGTTC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACGAACCGTCTATTATCTaGACCCTGATTAGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYEPSII*TLISSL
Trigger: CAGAGAACTAATCAGGGTCAAGATAATAGACGGTTC...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCTGGTATTTGGCTTGTaGGAACTGGGAACATATCTT +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPLVFGL*ELGTYL
Trigger: AAGATATGTTCCCAGTTCCAACAAGCCAAATACCAG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACCATCTGGTATTTGGCTaGTTGGAACTGGGAACATAT +
Preference number: 5 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYHLVFG*LELGTY
Trigger: ATATGTTCCCAGTTCCAACAAGCCAAATACCAGATG...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp CACCTCATTTTCACAGCAGTTGATCGGCCATTAATACAAGATGTTGTTGCTGTAATGCACATCTGGTATTaGGCTTGTTGGAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: HLIFTAVDRPLIQDVVAVMHIWY*ACWNWE
Trigger: TTCCCAGTTCCAACAAGCCAAATACCAGATGTGCAT...TACAGCAACAACATCTTGTATTAATGGCCGATCAACTGCTGTGAAAATGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CAA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACATGCACATCTGGTATTaGGCTTGTTGGAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: EQTMTTSPILICATAEIYMHIWY*ACWNWE
Trigger: TTCCCAGTTCCAACAAGCCAAATACCAGATGTGCAT...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCTAGAGCAGGTTTCTTaGTTCATTAGTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPLEQVS*FISLKA
Trigger: AGCCTTGAGACTAATGAACAAAGAAACCTGCTCTAG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGAGCTTCATCTTCAGTaGAGACCCAAATCATTTGCT +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPELHLQ*RPKSFA
Trigger: AGCAAATGATTTGGGTCTCAACTGAAGATGAAGCTC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp ACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGCCACTATGGACAAGCTTCCTCTaGAAAGTCTTTTTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: TGIQMPLPNLCNHLTLPLWTSFL*KVFFFS
Trigger: TGAGAAGAAAAAGACTTTCAAGAGGAAGCTTGTCCA...TAGTGGCAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427812.1
CDS-3UTR CAA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACACTACAATGGCAGAGTaGAGTAAATGCAATAGAGCC +
Preference number: 5 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYTTMAE*SKCNRA
Trigger: GGCTCTATTGCATTTACTCAACTCTGCCATTGTAGT...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS GCA 90 bp AGTCCACTGCAGAATTTGGAATGGCAACTCTCCACCTGGAGCCACTaGTATCACATTCCGTATATTCAAAGTGATAATCTTTTTATTCAG +
Preference number: 5 (lower is better)
Translates to: SPLQNLEWQLSTWSH*YHIPYIQSDNLFIQ
Trigger: CTGAATAAAAAGATTATCACTTTGAATATACGGAATGTGATAGCAGTGGCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425689.1
CDS-3UTR CAA 90 bp TTGGAATGCAGCCACGCCCATCCATTTACATTTTGTATGTGGTTGCTTTCATACTCAAAGAAGATGTTGTaGTCGACATACTGGTACTCA +
Preference number: 5 (lower is better)
Translates to: LECSHAHPFTFCMWLLSYSKKML*STYWYS
Trigger: TGAGTACCAGTATGTCGACAACAACATCTTCTTTGA...GTATGAAAGCAACCACATACAAAATGTAAATGGATGGGCGTGGCTGCATTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTAACTCAAAGAAGATGTaGTTGTCGACATACTGGTAC +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPNSKKM*LSTYWY
Trigger: GTACCAGTATGTCGACAACAACATCTTCTTTGAGTT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTTGGGCTCTATCCACTaGTACATTATCTGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPLGSIH*YIICVF
Trigger: AAAGACACAGATAATGTACAAGTGGATAGAGCCCAA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTAAGTCTGTTATATTGTaGGTACAGAGAGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPKSVIL*VQRAIF
Trigger: GAAGATGGCTCTCTGTACCAACAATATAACAGACTT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp AAGGCTGCTCGGAAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAGTAAAGTCTGTTATATaGTTGGTACAGAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: KAARKPLLSEGIIVDWHTVKSVI*LVQRAI
Trigger: GATGGCTCTCTGTACCAACAATATAACAGACTTTAC...TGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTTCCGAGCAGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTGTAAAGTCTGTTATATaGTTGGTACAGAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPVKSVI*LVQRAI
Trigger: GATGGCTCTCTGTACCAACAATATAACAGACTTTAC...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp CCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAACTGGTATTTGGCTTGTaGGAACTGGGAACATATCTT +
Preference number: 5 (lower is better)
Translates to: PLLSEGIIVDWHTNAPTKLVFGL*ELGTYL
Trigger: AAGATATGTTCCCAGTTCCAACAAGCCAAATACCAG...TTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CAA 90 bp TTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGTAATCATCTGACCCTGTGGTCTTCTTTTTCCTaGGTTGCCAAAGATTTGAGT +
Preference number: 5 (lower is better)
Translates to: LLTGIQMPLPNLCNHLTLWSSFS*VAKDLS
Trigger: ACTCAAATCTTTGGCAACCAAGGAAAAAGAAGACCA...CAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTGGTCTTCTTTTTCCTaGGTTGCCAAAGATTTGAGT +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPWSSFS*VAKDLS
Trigger: ACTCAAATCTTTGGCAACCAAGGAAAAAGAAGACCA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp AAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCCTAGAGCAGGTTTCTTaGTTCATTAGTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: KPLLSEGIIVDWHTNAPTLEQVS*FISLKA
Trigger: AGCCTTGAGACTAATGAACAAAGAAACCTGCTCTAG...GGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACTTCATTGGAATGCTaGGGGCAAATCATTTCCCTA +
Preference number: 5 (lower is better)
Translates to: EQTMTTSPILICATAEIYTSLEC*GQIISL
Trigger: TAGGGAAATGATTTGCCCCAAGCATTCCAATGAAGT...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTCATGGTCTACATTCTTaGGTTCCATCTGAAAATGTT +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPHGLHS*VPSENV
Trigger: AACATTTTCAGATGGAACCAAAGAATGTAGACCATG...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTATCTTCACCATGTCATaGATGAACCGTCTATTATCT +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPIFTMS*MNRLLS
Trigger: AGATAATAGACGGTTCATCAATGACATGGTGAAGAT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000450689.7
CDS-3UTR CAA 90 bp AAACCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAGTCTGTTATATTGTaGGTACAGAGAGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: KPLLSEGIIVDWHTNAPTKSVIL*VQRAIF
Trigger: GAAGATGGCTCTCTGTACCAACAATATAACAGACTT...GGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CAA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACAAGTCTGTTATATTGTaGGTACAGAGAGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: EQTMTTSPILICATAEIYKSVIL*VQRAIF
Trigger: GAAGATGGCTCTCTGTACCAACAATATAACAGACTT...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp CACCTCATTTTCACAGCAGTTGATCGGCCATTAATACAAGATGTTGTTGCTGTAGTAAAGTCTGTTATATaGTTGGTACAGAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: HLIFTAVDRPLIQDVVAVVKSVI*LVQRAI
Trigger: GATGGCTCTCTGTACCAACAATATAACAGACTTTAC...TACAGCAACAACATCTTGTATTAATGGCCGATCAACTGCTGTGAAAATGAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CAA 90 bp GAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATCTTCTTTTATATGCCCCTACCAAATTaGTGTAATCATCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: EMHIWYLACWNWEHIFFYMPLPN*CNHLTL
Trigger: CAGGGTCAGATGATTACACAAATTTGGTAGGGGCAT...ATAAAAGAAGATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CAA 90 bp CTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGCTGGTATTTGGCTTGTaGGAACTGGGAACATATCTT +
Preference number: 5 (lower is better)
Translates to: LSEGIIVDWHTNAPTKFVLVFGL*ELGTYL
Trigger: AAGATATGTTCCCAGTTCCAACAAGCCAAATACCAG...CACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CAA 90 bp CTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGCATCTGGTATTTGGCTaGTTGGAACTGGGAACATAT +
Preference number: 5 (lower is better)
Translates to: LSEGIIVDWHTNAPTKFVHLVFG*LELGTY
Trigger: ATATGTTCCCAGTTCCAACAAGCCAAATACCAGATG...CACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394714.6
ENST00000427812.1
CDS-3UTR CAA 90 bp TCGGCCATTAATACAAGATGTTGTTGCTGTAGAAGACTTATAAAAGAAATGCACCAACCGTTTCACAGGTaGCCAACTTTTTCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: SAINTRCCCCRRLIKEMHQPFHR*PTFSQA
Trigger: TGCCTGAGAAAAAGTTGGCAACCTGTGAAACGGTTG...GTGCATTTCTTTTATAAGTCTTCTACAGCAACAACATCTTGTATTAATGGCCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACTGGTCTTCTTTTTCCTaGGTTGCCAAAGATTTGAGT +
Preference number: 5 (lower is better)
Translates to: EQTMTTSPILICATAEIYWSSFS*VAKDLS
Trigger: ACTCAAATCTTTGGCAACCAAGGAAAAAGAAGACCA...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTATATATTTGGGGATCTaGAGGTTTTCAGTTGAACAG +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPIYLGI*RFSVEQ
Trigger: CTGTTCAACTGAAAACCTCAAGATCCCCAAATATAT...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp GGCAAGGTACTTGACCATGTGATAAGGCAATCAAATGTTTCAATCTCCTTCCCTTGTCTCTTCATATATTaGGGGATCTTGAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: GKVLDHVIRQSNVSISFPCLFIY*GILRFS
Trigger: TGAAAACCTCAAGATCCCCAAATATATGAAGAGACA...AGGGAAGGAGATTGAAACATTTGATTGCCTTATCACATGGTCAAGTACCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394714.6
ENST00000416314.5
ENST00000444627.5
ENST00000450689.7
CDS-3UTR CAA 90 bp ACTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATTGCATCAGCAGTGCATaGGTGGGCTTAAACTTGGTT +
Preference number: 5 (lower is better)
Translates to: TYKRNAHLVFGLLELGTYCISSA*VGLNLV
Trigger: AACCAAGTTTAAGCCCACCAATGCACTGCTGATGCA...ATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCATGCATCAGCAGTGCATaGGTGGGCTTAAACTTGGTT +
Preference number: 5 (lower is better)
Translates to: EITPVFHTVICTYRQTFSCISSA*VGLNLV
Trigger: AACCAAGTTTAAGCCCACCAATGCACTGCTGATGCA...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACCGAATGAGTCGGGTGTaGAGATTTCTAAAAGTTTAC +
Preference number: 5 (lower is better)
Translates to: EQTMTTSPILICATAEIYRMSRV*RFLKVY
Trigger: GTAAACTTTTAGAAATCTCAACACCCGACTCATTCG...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp TTGTTCATTAGTCTCAAGGCTACAGCACTGTCTCTTCATATATTTGGGGATCTTTCAAAGAAGATGTTGTaGTCGACATACTGGTACTCA +
Preference number: 5 (lower is better)
Translates to: LFISLKATALSLHIFGDLSKKML*STYWYS
Trigger: TGAGTACCAGTATGTCGACAACAACATCTTCTTTGA...AAGATCCCCAAATATATGAAGAGACAGTGCTGTAGCCTTGAGACTAATGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp CTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAATTTGTGAACTCAAAGAAGATGTaGTTGTCGACATACTGGTAC +
Preference number: 5 (lower is better)
Translates to: LSEGIIVDWHTNAPTKFVNSKKM*LSTYWY
Trigger: GTACCAGTATGTCGACAACAACATCTTCTTTGAGTT...CACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAGATATGGGTGTAAGCTaGTTTTTCTTTGGTTCCACC +
Preference number: 5 (lower is better)
Translates to: TMTTSPILICATAEIYTKDMGVS*FFFGST
Trigger: GGTGGAACCAAAGAAAAACAAGCTTACACCCATATC...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACATATATTTGGGGATCTaGAGGTTTTCAGTTGAACAG +
Preference number: 5 (lower is better)
Translates to: EQTMTTSPILICATAEIYIYLGI*RFSVEQ
Trigger: CTGTTCAACTGAAAACCTCAAGATCCCCAAATATAT...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACTGTCTCTTCATATATTaGGGGATCTTGAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: EQTMTTSPILICATAEIYCLFIY*GILRFS
Trigger: TGAAAACCTCAAGATCCCCAAATATATGAAGAGACA...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAACTAGAGCAGGTTTCTTaGTTCATTAGTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: TMTTSPILICATAEIYTKLEQVS*FISLKA
Trigger: AGCCTTGAGACTAATGAACAAAGAAACCTGCTCTAG...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp CCCTTACTTTCAGAAGGAATAATTGTTGACTGGCATACAAATGCCCCTACCAAATGTCTCCTTTTTATTTaGGACAAGCTTCCTCTTGAA +
Preference number: 5 (lower is better)
Translates to: PLLSEGIIVDWHTNAPTKCLLFI*DKLPLE
Trigger: TTCAAGAGGAAGCTTGTCCAAAATAAAAAGGAGACA...TTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427812.1
CDS-3UTR CAA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACGATTTTGCCAGTGATTaGATTGACAAGCTTTCCTAT +
Preference number: 5 (lower is better)
Translates to: EQTMTTSPILICATAEIYDFASD*IDKLSY
Trigger: ATAGGAAAGCTTGTCAATCAAATCACTGGCAAAATC...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAAACAAGTCATACTTCATaGGAATGCTTGGGGCAAATC +
Preference number: 5 (lower is better)
Translates to: TMTTSPILICATAEIYTKTSHTS*ECLGQI
Trigger: GATTTGCCCCAAGCATTCCAATGAAGTATGACTTGT...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCATTGGCAAGATGGGTCTaGAAGAAGCAGTCAATCATG +
Preference number: 5 (lower is better)
Translates to: EITPVFHTVICTYRQTFSLARWV*KKQSIM
Trigger: CATGATTGACTGCTTCTTCAAGACCCATCTTGCCAA...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GAGCAAACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACATAAATAAAGTTTTATaGGAATGCAGCCACGCCCAT +
Preference number: 5 (lower is better)
Translates to: EQTMTTSPILICATAEIYINKVL*ECSHAH
Trigger: ATGGGCGTGGCTGCATTCCAATAAAACTTTATTTAT...GTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp ACAATGACAACCTCACCTATACTCATATGTGCAACAGCAGAGATATACACAAAATCCAGTAGAGTATGTTaGTGCCTGATTTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: TMTTSPILICATAEIYTKSSRVC*CLISAL
Trigger: TAATGCTGAAATCAGGCACAAACATACTCTACTGGA...TTTTGTGTATATCTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp TTGTTCATTAGTCTCAAGGCTACAGCACTGTCTCTTCATATATTTGGGGATCTTTGTCTCTTCATATATTaGGGGATCTTGAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LFISLKATALSLHIFGDLCLFIY*GILRFS
Trigger: TGAAAACCTCAAGATCCCCAAATATATGAAGAGACA...AAGATCCCCAAATATATGAAGAGACAGTGCTGTAGCCTTGAGACTAATGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS-3UTR CAA 90 bp ACTTATAAAAGAAATGCACATCTGGTATTTGGCTTGTTGGAACTGGGAACATATGAGCTTCATCTTCAGTaGAGACCCAAATCATTTGCT +
Preference number: 5 (lower is better)
Translates to: TYKRNAHLVFGLLELGTYELHLQ*RPKSFA
Trigger: AGCAAATGATTTGGGTCTCAACTGAAGATGAAGCTC...ATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS TCA 90 bp ATTCTAGGCAGCAATAGAGGATCTAAGCAATCAAACCTCAGTTTCTaGCACTTGGTTGATATCCATAGAGAATTTATTGGTCCATTAACA +
Preference number: 5 (lower is better)
Translates to: ILGSNRGSKQSNLSF*HLVDIHREFIGPLT
Trigger: TGTTAATGGACCAATAAATTCTCTATGGATATCAACCAAGTGTCAGAAACTGAGGTTTGATTGCTTAGATCCTCTATTGCTGCCTAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470853.1
CDS-3UTR CAA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCAAACTCAAAGAAGATGTaGTTGTCGACATACTGGTAC +
Preference number: 5 (lower is better)
Translates to: EITPVFHTVICTYRQTFSNSKKM*LSTYWY
Trigger: GTACCAGTATGTCGACAACAACATCTTCTTTGAGTT...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS-3UTR CAA 90 bp GAAATTACCCCAGTATTTCATACAGTCATCTGTACTTATAGACAAACCTTCTCACTAAGGACATTTTCTTaGGGCAAACTCAGTTTAGGA +
Preference number: 5 (lower is better)
Translates to: EITPVFHTVICTYRQTFSLRTFS*GKLSLG
Trigger: TCCTAAACTGAGTTTGCCCAAAGAAAATGTCCTTAG...TGAGAAGGTTTGTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450689.7
CDS GCA 72 bp GCCTCTCACTGGGTCAGGCAGGCCAGAGCAGTCCACTaGAGAATTTGGAATGGCAACTCTCCACCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: ASHWVRQARAVH*RIWNGNSPPGA
Trigger: GGCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACTGCTCTGGCCTGCCTGACCCAGTGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398276.6
ENST00000416314.5
ENST00000425689.1
ENST00000444627.5
ENST00000450689.7
CDS CAA 90 bp TGCCTCTCACTGGGTCAGGCAGGCCAGAGCAGTCCACTGCAGAATTaGGAATGGCAACTCTCCACCTGGAGCCACTGCTATCACATTCCG +
Preference number: 6 (lower is better)
Translates to: CLSLGQAGQSSPLQN*EWQLSTWSHCYHIP
Trigger: CGGAATGTGATAGCAGTGGCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACTGCTCTGGCCTGCCTGACCCAGTGAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398276.6
ENST00000416314.5
ENST00000425689.1
ENST00000444627.5
ENST00000450689.7
CDS CCA 72 bp TGGGTCAGGCAGGCCAGAGCAGTCCACTGCAGAATTTaGAATGGCAACTCTCCACCTGGAGCCACTGCTATC +
Preference number: 6 (lower is better)
Translates to: WVRQARAVHCRI*NGNSPPGATAI
Trigger: GATAGCAGTGGCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACTGCTCTGGCCTGCCTGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398276.6
ENST00000416314.5
ENST00000425689.1
ENST00000444627.5
ENST00000450689.7
CDS CCA 72 bp CAGGCAGGCCAGAGCAGTCCACTGCAGAATTTGGAATaGCAACTCTCCACCTGGAGCCACTGCTATCACATT +
Preference number: 6 (lower is better)
Translates to: QAGQSSPLQNLE*QLSTWSHCYHI
Trigger: AATGTGATAGCAGTGGCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACTGCTCTGGCCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398276.6
ENST00000416314.5
ENST00000425689.1
ENST00000444627.5
ENST00000450689.7
CDS CCA 72 bp GAGGGATCCAAGAAGAGTGCATTCTTTGCCTCTCACTaGGTCAGGCAGGCCAGAGCAGTCCACTGCAGAATT +
Preference number: 6 (lower is better)
Translates to: EGSKKSAFFASH*VRQARAVHCRI
Trigger: AATTCTGCAGTGGACTGCTCTGGCCTGCCTGACCCAGTGAGAGGCAAAGAATGCACTCTTCTTGGATCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416314.5
CDS CCA 72 bp AGAAGCACAGGAGAAAGTGCATTCTTTGCCTCTCACTaGGTCAGGCAGGCCAGAGCAGTCCACTGCAGAATT +
Preference number: 6 (lower is better)
Translates to: RSTGESAFFASH*VRQARAVHCRI
Trigger: AATTCTGCAGTGGACTGCTCTGGCCTGCCTGACCCAGTGAGAGGCAAAGAATGCACTTTCTCCTGTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398276.6
ENST00000425689.1
ENST00000444627.5
ENST00000450689.7
CDS CCA 72 bp ACAGGTAGGTGTCAGGTGGACATTCCTTGCACTGGTTaGTTTCTTTCTCAATGTAGTGGCATCTTGACCCTG +
Preference number: 6 (lower is better)
Translates to: TGRCQVDIPCTG*FLSQCSGILTL
Trigger: CAGGGTCAAGATGCCACTACATTGAGAAAGAAACCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444627.5
CDS TCA 72 bp AAAATCCTGCCGGCAATTCATCCCATTCATCAAATTTaGTGCCACTGCCCAAGGAATAGGTGCCTTCACCAC +
Preference number: 6 (lower is better)
Translates to: KILPAIHPIHQI*CHCPRNRCLHH
Trigger: GTGGTGAAGGCACCTATTCCTTGGGCAGTGGCATCAAATTTGATGAATGGGATGAATTGCCGGCAGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398276.6
ENST00000423294.5
ENST00000425689.1
ENST00000444627.5
ENST00000450689.7
CDS TCA 72 bp TGCATCCACACTGTTTTGCCTCCCTCACTGTGTCAATaGCAAGTGAGAATAGAAACATCAAGCCACATCACC +
Preference number: 6 (lower is better)
Translates to: CIHTVLPPSLCQ*QVRIETSSHIT
Trigger: GGTGATGTGGCTTGATGTTTCTATTCTCACTTGTCATTGACACAGTGAGGGAGGCAAAACAGTGTGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425689.1
CDS TCA 72 bp CAGGTTTCAACTGACTGCATAAGTGATTTGATACACTaGGAACCAGACAAGGTTGCCCCTGGTGGAGAAATC +
Preference number: 6 (lower is better)
Translates to: QVSTDCISDLIH*EPDKVAPGGEI
Trigger: GATTTCTCCACCAGGGGCAACCTTGTCTGGTTCTCAGTGTATCAAATCACTTATGCAGTCAGTTGAAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470853.1
CDS CCA 72 bp AGTCCACTGCAGAATTTGGAATGGCAACTCTCCACCTaGAGCCACTGCTATCACATTCCGTATATTCAAAGT +
Preference number: 6 (lower is better)
Translates to: SPLQNLEWQLST*SHCYHIPYIQS
Trigger: ACTTTGAATATACGGAATGTGATAGCAGTGGCTCCAGGTGGAGAGTTGCCATTCCAAATTCTGCAGTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398276.6
ENST00000416314.5
ENST00000425689.1
ENST00000444627.5
ENST00000450689.7
CDS TCA 72 bp GTTGTCGACATACTGGTACTCAAAGAAGACATAGCCTaGCTTCTTAAGGTGCACAGCATAGATCAAAGACAC +
Preference number: 6 (lower is better)
Translates to: VVDILVLKEDIA*LLKVHSIDQRH
Trigger: GTGTCTTTGATCTATGCTGTGCACCTTAAGAAGTCAGGCTATGTCTTCTTTGAGTACCAGTATGTCGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394714.6
ENST00000398276.6
ENST00000416314.5
ENST00000423294.5
ENST00000444627.5
ENST00000450689.7
CDS TCA 72 bp GATGCCTGTAGTTCTCCAGTAGAGTATGTTTGTGCCTaGTTTCAGCATTACCTGGTAATTGCCTTCAAGCAT +
Preference number: 6 (lower is better)
Translates to: DACSSPVEYVCA*FQHYLVIAFKH
Trigger: ATGCTTGAAGGCAATTACCAGGTAATGCTGAAATCAGGCACAAACATACTCTACTGGAGAACTACAGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394714.6
CDS GCA 72 bp TACTTATTCAGTTCAAAATCCTGGTTGTGGTTATTCTaGTGCATCCACACTGTTTTGCCTCCCTCACTGTGT +
Preference number: 6 (lower is better)
Translates to: YLFSSKSWLWLF*CIHTVLPPSLC
Trigger: ACACAGTGAGGGAGGCAAAACAGTGTGGATGCAGCAGAATAACCACAACCAGGATTTTGAACTGAATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398276.6
ENST00000416314.5
CDS GCA 72 bp TTATTCAGTTCAAAATCCTGGTTGTGGTTATTCTGCTaGATCCACACTGTTTTGCCTCCCTCACTGTGTCAA +
Preference number: 6 (lower is better)
Translates to: LFSSKSWLWLFC*IHTVLPPSLCQ
Trigger: TTGACACAGTGAGGGAGGCAAAACAGTGTGGATGCAGCAGAATAACCACAACCAGGATTTTGAACTGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416314.5
ENST00000425689.1
CDS GCA 72 bp CAGAATTTGGAATGGCAACTCTCCACCTGGAGCCACTaGTATCACATTCCGTATATTCAAAGTGATAATCTT +
Preference number: 6 (lower is better)
Translates to: QNLEWQLSTWSH*YHIPYIQSDNL
Trigger: AAGATTATCACTTTGAATATACGGAATGTGATAGCAGTGGCTCCAGGTGGAGAGTTGCCATTCCAAATTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398276.6
ENST00000416314.5
ENST00000425689.1
ENST00000444627.5
ENST00000450689.7
CDS CAA 90 bp ATTCAAAGTGATAATCTTTCTTACTTATTCAGTTCAAAATCCTGGTaGTGGTTATTCTGCTGCATCCACACTGTTTTGCCTCCCTCACTG +
Preference number: 6 (lower is better)
Translates to: IQSDNLSYLFSSKSW*WLFCCIHTVLPPSL
Trigger: CAGTGAGGGAGGCAAAACAGTGTGGATGCAGCAGAATAACCACAACCAGGATTTTGAACTGAATAAGTAAGAAAGATTATCACTTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398276.6
ENST00000416314.5
CDS TCA 72 bp AGCAATAGAGGATCTAAGCAATCAAACCTCAGTTTCTaGCACTTGGTTGATATCCATAGAGAATTTATTGGT +
Preference number: 6 (lower is better)
Translates to: SNRGSKQSNLSF*HLVDIHREFIG
Trigger: ACCAATAAATTCTCTATGGATATCAACCAAGTGTCAGAAACTGAGGTTTGATTGCTTAGATCCTCTATTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470853.1
CDS TCA 72 bp TTAACAGCTGCAGAGTTGCATAGTATTCTATCACTTTaGCAGATGAAAATATCTAACTCCTTACTGATGATG +
Preference number: 6 (lower is better)
Translates to: LTAAELHSILSL*QMKISNSLLMM
Trigger: CATCATCAGTAAGGAGTTAGATATTTTCATCTGTCAAAGTGATAGAATACTATGCAACTCTGCAGCTGTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480216.1
CDS GCA 72 bp TCCTTACTGATGATGTTTGACAACCAACGAAAACAATaGTGCAGTGAATATTATTGTATCTATATCATGTGC +
Preference number: 6 (lower is better)
Translates to: SLLMMFDNQRKQ*CSEYYCIYIMC
Trigger: GCACATGATATAGATACAATAATATTCACTGCAGCATTGTTTTCGTTGGTTGTCAAACATCATCAGTAAGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480216.1