RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELAPOR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000116299

Ensembl transcript IDs: ENST00000369936.2, ENST00000369938.5, ENST00000369939.8, ENST00000457623.6, ENST00000464345.1, ENST00000490758.6, ENST00000526264.5, ENST00000527501.1, ENST00000527996.5, ENST00000529753.5, ENST00000531664.5, ENST00000533147.5, ENST00000533374.1, ENST00000534476.5

Found 803 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTGGCAAAGCCATGGGGCAGCTCATCCCACTCATCAAACCGAATaGCTGTGCCGAGGGAGTAGCGGCCCTCAGCGCATGGCTTACATG +
Preference number: 1 (lower is better)
Translates to: GWQSHGAAHPTHQTE*LCRGSSGPQRMAYM
Trigger: CATGTAAGCCATGCGCTGAGGGCCGCTACTCCCTCGGCACAGGCATTCGGTTTGATGAGTGGGATGAGCTGCCCCATGGCTTTGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 90 bp AGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTaGAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGT +
Preference number: 1 (lower is better)
Translates to: SSGCCRMLAPKSPQA*KGAMQGEEAGEAGS
Trigger: ACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
3UTR CCA 90 bp CTGGCAGGTGCTGTTGTTGGTTTTGAAGAAGCCTGGGTTGCAGGGTaGGCAGTGGGTCTTCACACCAGAGGCAGGCAGCTTCACTGCCCC +
Preference number: 1 (lower is better)
Translates to: LAGAVVGFEEAWVAG*AVGLHTRGRQLHCP
Trigger: GGGGCAGTGAAGCTGCCTGCCTCTGGTGTGAAGACCCACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACCAACAACAGCACCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 90 bp CAAAGCCATGGGGCAGCTCATCCCACTCATCAAACCGAATGCCTGTaGCGAGGGAGTAGCGGCCCTCAGCGCATGGCTTACATGACTGGT +
Preference number: 1 (lower is better)
Translates to: QSHGAAHPTHQTECL*RGSSGPQRMAYMTG
Trigger: ACCAGTCATGTAAGCCATGCGCTGAGGGCCGCTACTCCCTCGGCACAGGCATTCGGTTTGATGAGTGGGATGAGCTGCCCCATGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 90 bp GCACTGTCATCCAGCTCCATGTTGGCTGAGAGGCTGGCAAAGCCATaGGGCAGCTCATCCCACTCATCAAACCGAATGCCTGTGCCGAGG +
Preference number: 1 (lower is better)
Translates to: ALSSSSMLAERLAKP*GSSSHSSNRMPVPR
Trigger: CCTCGGCACAGGCATTCGGTTTGATGAGTGGGATGAGCTGCCCCATGGCTTTGCCAGCCTCTCAGCCAACATGGAGCTGGATGACAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 90 bp GTGCTGTTGTTGGTTTTGAAGAAGCCTGGGTTGCAGGGTGGGCAGTaGGTCTTCACACCAGAGGCAGGCAGCTTCACTGCCCCCTCAAGG +
Preference number: 1 (lower is better)
Translates to: VLLLVLKKPGLQGGQ*VFTPEAGSFTAPSR
Trigger: CCTTGAGGGGGCAGTGAAGCTGCCTGCCTCTGGTGTGAAGACCCACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACCAACAACAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 90 bp ATATGGGCAGGGCTGGCAGGTGCTGTTGTTGGTTTTGAAGAAGCCTaGGTTGCAGGGTGGGCAGTGGGTCTTCACACCAGAGGCAGGCAG +
Preference number: 1 (lower is better)
Translates to: IWAGLAGAVVGFEEA*VAGWAVGLHTRGRQ
Trigger: CTGCCTGCCTCTGGTGTGAAGACCCACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACCAACAACAGCACCTGCCAGCCCTGCCCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 90 bp GTTCCCGGTGGACTCAGCAGCACTGTCATCCAGCTCCATGTTGGCTaGGAGGCTGGCAAAGCCATGGGGCAGCTCATCCCACTCATCAAA +
Preference number: 1 (lower is better)
Translates to: VPGGLSSTVIQLHVG*EAGKAMGQLIPLIK
Trigger: TTTGATGAGTGGGATGAGCTGCCCCATGGCTTTGCCAGCCTCTCAGCCAACATGGAGCTGGATGACAGTGCTGCTGAGTCCACCGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 90 bp TACAGTTCCCGGTGGACTCAGCAGCACTGTCATCCAGCTCCATGTTaGCTGAGAGGCTGGCAAAGCCATGGGGCAGCTCATCCCACTCAT +
Preference number: 1 (lower is better)
Translates to: YSSRWTQQHCHPAPC*LRGWQSHGAAHPTH
Trigger: ATGAGTGGGATGAGCTGCCCCATGGCTTTGCCAGCCTCTCAGCCAACATGGAGCTGGATGACAGTGCTGCTGAGTCCACCGGGAACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 90 bp CTCCCTTTGAGCTGGTTATCCAGGGGAAATGGATCCAGGCTGCTATaGAGATTATCCACCAGGGAACCCCGACACCCTCCTCACCCAGCC +
Preference number: 1 (lower is better)
Translates to: LPLSWLSRGNGSRLL*RLSTREPRHPPHPA
Trigger: GGCTGGGTGAGGAGGGTGTCGGGGTTCCCTGGTGGATAATCTTCATAGCAGCCTGGATCCATTTCCCCTGGATAACCAGCTCAAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CCA 90 bp TGGACTCAGCAGCACTGTCATCCAGCTCCATGTTGGCTGAGAGGCTaGCAAAGCCATGGGGCAGCTCATCCCACTCATCAAACCGAATGC +
Preference number: 1 (lower is better)
Translates to: WTQQHCHPAPCWLRG*QSHGAAHPTHQTEC
Trigger: GCATTCGGTTTGATGAGTGGGATGAGCTGCCCCATGGCTTTGCCAGCCTCTCAGCCAACATGGAGCTGGATGACAGTGCTGCTGAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 90 bp CTGGGCAAAGTTTGCAGAAAGAGGAGCCCTGCTTGTCTGCATACGTaGCAGGTTTGCAGGGGAAGCATTCTGAAGTGTAGGCCACCCCTG +
Preference number: 1 (lower is better)
Translates to: LGKVCRKRSPACLHT*QVCRGSILKCRPPL
Trigger: CAGGGGTGGCCTACACTTCAGAATGCTTCCCCTGCAAACCTGGCACGTATGCAGACAAGCAGGGCTCCTCTTTCTGCAAACTTTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 90 bp AGGTTCCTGAATCTCGGTCAATATAGTAACCAGCAGGACAAGAGGTaGAGGAGGAGCCCACATCAGAGGCTTCTAGGGCACAGGGACGGC +
Preference number: 1 (lower is better)
Translates to: RFLNLGQYSNQQDKR*RRSPHQRLLGHRDG
Trigger: GCCGTCCCTGTGCCCTAGAAGCCTCTGATGTGGGCTCCTCCTGCACCTCTTGTCCTGCTGGTTACTATATTGACCGAGATTCAGGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 90 bp GTCGTCCTCTACATCCTCGCCTTCCATGATGGCGCAGCTGTCAGCTaGTGGCAGGTCACAGTCCTTGAGAGTAGCATTCATCACCAGCTT +
Preference number: 1 (lower is better)
Translates to: VVLYILAFHDGAAVS*WQVTVLESSIHHQL
Trigger: AAGCTGGTGATGAATGCTACTCTCAAGGACTGTGACCTGCCAGCAGCTGACAGCTGCGCCATCATGGAAGGCGAGGATGTAGAGGACGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 90 bp GATGACTGCCTGGCAGACGTAGGCTGTGATAGATTTGGAGAACCCTaGCTCACCCTCAGGAATCCGGAGGTCAGTGACATTGTCGGTGCA +
Preference number: 1 (lower is better)
Translates to: DDCLADVGCDRFGEP*LTLRNPEVSDIVGA
Trigger: TGCACCGACAATGTCACTGACCTCCGGATTCCTGAGGGTGAGTCAGGGTTCTCCAAATCTATCACAGCCTACGTCTGCCAGGCAGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 90 bp AAGGCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTaGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTG +
Preference number: 1 (lower is better)
Translates to: KATMKRFPAVGVAGC*HPNRRRLAKVLCKV
Trigger: CACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
3UTR CCA 90 bp ACAGCAGGTGCCCAAGTATTGCTGAGGCTACAGAAGACTTTAGGCTaGAGCTCAGGAGCTGCGTATCTGCATCCACACTGGGGGAAGTTC +
Preference number: 1 (lower is better)
Translates to: TAGAQVLLRLQKTLG*SSGAAYLHPHWGKF
Trigger: GAACTTCCCCCAGTGTGGATGCAGATACGCAGCTCCTGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACTTGGGCACCTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR TCA 90 bp TCCAGGGACAGTTTTCTGTGGACTGCACCTGACGCGGATGGTGGTTaGTCTCCCAGAACTGCAGGACTGGGTCACATCATTGGACCTATA +
Preference number: 1 (lower is better)
Translates to: SRDSFLWTAPDADGG*SPRTAGLGHIIGPI
Trigger: TATAGGTCCAATGATGTGACCCAGTCCTGCAGTTCTGGGAGATCAACCACCATCCGCGTCAGGTGCAGTCCACAGAAAACTGTCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 90 bp GATAAGGCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATaGTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAG +
Preference number: 1 (lower is better)
Translates to: DKATMKRFPAVGVAG*WHPNRRRLAKVLCK
Trigger: CTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGCCTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
3UTR GCA 90 bp AGTATTGCTGAGGCTACAGAAGACTTTAGGCTGGAGCTCAGGAGCTaGGTATCTGCATCCACACTGGGGGAAGTTCCAACATGGACACAG +
Preference number: 1 (lower is better)
Translates to: SIAEATEDFRLELRS*VSASTLGEVPTWTQ
Trigger: CTGTGTCCATGTTGGAACTTCCCCCAGTGTGGATGCAGATACGCAGCTCCTGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CCA 90 bp TGCCTCGATTTAGCTCCACACTGTGGAATTCCCATCCTTTCTCTGTaGTCTTCATCCACCTGGAGTCATCTGCATTGGGCTGGCACTGGT +
Preference number: 1 (lower is better)
Translates to: CLDLAPHCGIPILSL*SSSTWSHLHWAGTG
Trigger: ACCAGTGCCAGCCCAATGCAGATGACTCCAGGTGGATGAAGACCACAGAGAAAGGATGGGAATTCCACAGTGTGGAGCTAAATCGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 90 bp GTGGGCTTTCAGAATTGTGTTAGTGGGGCAGGAGTGGCAGGTTCCTaGATCTCGGTCAATATAGTAACCAGCAGGACAAGAGGTGCAGGA +
Preference number: 1 (lower is better)
Translates to: VGFQNCVSGAGVAGS*ISVNIVTSRTRGAG
Trigger: TCCTGCACCTCTTGTCCTGCTGGTTACTATATTGACCGAGATTCAGGAACCTGCCACTCCTGCCCCACTAACACAATTCTGAAAGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 90 bp CCCTTTGGAAGTGAAGCTTGGCCCTCCAGCAAGAGTGACAGTGTTTaGCAAAGCGGAGAAGTTGTAGTTGAAAGTCCTGGTCGGAGTGTT +
Preference number: 1 (lower is better)
Translates to: PFGSEAWPSSKSDSV*QSGEVVVESPGRSV
Trigger: AACACTCCGACCAGGACTTTCAACTACAACTTCTCCGCTTTGGCAAACACTGTCACTCTTGCTGGAGGGCCAAGCTTCACTTCCAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 90 bp GATCACGTCCGGTATTCCCAAGGACTCCAGGTGGAAAAGTTCAGCTaGGGAGGTGATTCCATCCAGAGTCATATCTGTTGTCACCCCAAT +
Preference number: 1 (lower is better)
Translates to: DHVRYSQGLQVEKFS*GGDSIQSHICCHPN
Trigger: ATTGGGGTGACAACAGATATGACTCTGGATGGAATCACCTCCCCAGCTGAACTTTTCCACCTGGAGTCCTTGGGAATACCGGACGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 90 bp CAGAGATGCCCACTTTCAGCCAGAAATCTATGGTTTTGCAGATGGTaGCTCTCTGCTCAGGCAGAGAAATGCCACCAGAGCATAGCTTGG +
Preference number: 1 (lower is better)
Translates to: QRCPLSARNLWFCRW*LSAQAEKCHQSIAW
Trigger: CCAAGCTATGCTCTGGTGGCATTTCTCTGCCTGAGCAGAGAGTCACCATCTGCAAAACCATAGATTTCTGGCTGAAAGTGGGCATCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 90 bp AAAGTAGCAGGTCAAGACGGTGAGCAGGATGGCAGTACAGGTGCCTaGAGAGATGCCCACTTTCAGCCAGAAATCTATGGTTTTGCAGAT +
Preference number: 1 (lower is better)
Translates to: KVAGQDGEQDGSTGA*RDAHFQPEIYGFAD
Trigger: ATCTGCAAAACCATAGATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCTGTACTGCCATCCTGCTCACCGTCTTGACCTGCTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 90 bp TGTAGGCCACCCCTGTTATGGCAATGTTTCTCACCAGCACAGGCTTaGGTACTTTGGTCCATACTGAGAAGGCTGTGGTTCTCCAATAGA +
Preference number: 1 (lower is better)
Translates to: CRPPLLWQCFSPAQA*VLWSILRRLWFSNR
Trigger: TCTATTGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGAGAAACATTGCCATAACAGGGGTGGCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 90 bp TCTAAATCCTGGCACAACCAGAGTGAGAATCATGAAGTCATTGTCTaGGGCTCCAGCAGCTGTGTAAATGTGATCACCAGCCACCTCCCA +
Preference number: 1 (lower is better)
Translates to: SKSWHNQSENHEVIV*GSSSCVNVITSHLP
Trigger: TGGGAGGTGGCTGGTGATCACATTTACACAGCTGCTGGAGCCTCAGACAATGACTTCATGATTCTCACTCTGGTTGTGCCAGGATTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 90 bp TCACCAGCACAGGCTTGGGTACTTTGGTCCATACTGAGAAGGCTGTaGTTCTCCAATAGAGGACATTATTGCCTCGATTTAGCTCCACAC +
Preference number: 1 (lower is better)
Translates to: SPAQAWVLWSILRRL*FSNRGHYCLDLAPH
Trigger: GTGTGGAGCTAAATCGAGGCAATAATGTCCTCTATTGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 90 bp GAGGGTAAAGTGATGGAAGTATTTCAGCCCTTTGGAAGTGAAGCTTaGCCCTCCAGCAAGAGTGACAGTGTTTGCCAAAGCGGAGAAGTT +
Preference number: 1 (lower is better)
Translates to: EGKVMEVFQPFGSEA*PSSKSDSVCQSGEV
Trigger: AACTTCTCCGCTTTGGCAAACACTGTCACTCTTGCTGGAGGGCCAAGCTTCACTTCCAAAGGGCTGAAATACTTCCATCACTTTACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 90 bp CAAAGCGGAGAAGTTGTAGTTGAAAGTCCTGGTCGGAGTGTTGCGTaGGAAGGTGCAATCGTTGTAGCACAGAGAGTGGATCTTGTTGTT +
Preference number: 1 (lower is better)
Translates to: QSGEVVVESPGRSVA*EGAIVVAQRVDLVV
Trigger: AACAACAAGATCCACTCTCTGTGCTACAACGATTGCACCTTCTCACGCAACACTCCGACCAGGACTTTCAACTACAACTTCTCCGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 90 bp TTGCAAATGCCATCCCCTTTCTATATCTACCATCTGGTCACCAAATaGTCACTGGAGAAAGGGCACAGGCACAAATCATGGGCAATTGGG +
Preference number: 1 (lower is better)
Translates to: LQMPSPFYIYHLVTK*SLEKGHRHKSWAIG
Trigger: CCCAATTGCCCATGATTTGTGCCTGTGCCCTTTCTCCAGTGACCATTTGGTGACCAGATGGTAGATATAGAAAGGGGATGGCATTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CCA 90 bp CCCCTGTTATGGCAATGTTTCTCACCAGCACAGGCTTGGGTACTTTaGTCCATACTGAGAAGGCTGTGGTTCTCCAATAGAGGACATTAT +
Preference number: 1 (lower is better)
Translates to: PLLWQCFSPAQAWVL*SILRRLWFSNRGHY
Trigger: ATAATGTCCTCTATTGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGAGAAACATTGCCATAACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 90 bp TCTAAGGGCTGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTaGGACAGCAGGTGCCCAAGTATTGCTGAGGCTACAGAAGACTTT +
Preference number: 1 (lower is better)
Translates to: SKGCLWPLSQKKAIQ*DSRCPSIAEATEDF
Trigger: AAAGTCTTCTGTAGCCTCAGCAATACTTGGGCACCTGCTGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR GCA 90 bp GAATTCCCATCCTTTCTCTGTGGTCTTCATCCACCTGGAGTCATCTaGATTGGGCTGGCACTGGTCATTCTGAACGAAAAACTCAAAGAT +
Preference number: 1 (lower is better)
Translates to: EFPSFLCGLHPPGVI*IGLALVILNEKLKD
Trigger: ATCTTTGAGTTTTTCGTTCAGAATGACCAGTGCCAGCCCAATGCAGATGACTCCAGGTGGATGAAGACCACAGAGAAAGGATGGGAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 90 bp GTATTTGTCAGGGTCACACTGGTGGCAAGAAGTTTCTCCTTTATTTaGATAAGAGTTGGCTGGGCAAAGTTTGCAGAAAGAGGAGCCCTG +
Preference number: 1 (lower is better)
Translates to: VFVRVTLVARSFSFI*IRVGWAKFAERGAL
Trigger: CAGGGCTCCTCTTTCTGCAAACTTTGCCCAGCCAACTCTTATTCAAATAAAGGAGAAACTTCTTGCCACCAGTGTGACCCTGACAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 90 bp AAGAAGTTTCTCCTTTATTTGAATAAGAGTTGGCTGGGCAAAGTTTaGAGAAAGAGGAGCCCTGCTTGTCTGCATACGTGCCAGGTTTGC +
Preference number: 1 (lower is better)
Translates to: KKFLLYLNKSWLGKV*RKRSPACLHTCQVC
Trigger: GCAAACCTGGCACGTATGCAGACAAGCAGGGCTCCTCTTTCTGCAAACTTTGCCCAGCCAACTCTTATTCAAATAAAGGAGAAACTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 90 bp AGACTAGTCACTTGCAAATGCCATCCCCTTTCTATATCTACCATCTaGTCACCAAATGGTCACTGGAGAAAGGGCACAGGCACAAATCAT +
Preference number: 1 (lower is better)
Translates to: RLVTCKCHPLSISTI*SPNGHWRKGTGTNH
Trigger: ATGATTTGTGCCTGTGCCCTTTCTCCAGTGACCATTTGGTGACCAGATGGTAGATATAGAAAGGGGATGGCATTTGCAAGTGACTAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CCA 90 bp TCATTCCAAAGCTATAAGAATTATGAGCAGACGAAGCTATGGCTCTaGCGGATGGGCCATTTTGGGAAACAAGATACAAGCAAGGGCATA +
Preference number: 1 (lower is better)
Translates to: SFQSYKNYEQTKLWL*RMGHFGKQDTSKGI
Trigger: TATGCCCTTGCTTGTATCTTGTTTCCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTCATAATTCTTATAGCTTTGGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CCA 90 bp GCACTGGTCATTCTGAACGAAAAACTCAAAGATGATGCTGGAGTCTaGATAGTAGTATTCGAAGTTAACGGTGCCAGATTGCTTCAGGTT +
Preference number: 1 (lower is better)
Translates to: ALVILNEKLKDDAGV*IVVFEVNGARLLQV
Trigger: AACCTGAAGCAATCTGGCACCGTTAACTTCGAATACTACTATCCAGACTCCAGCATCATCTTTGAGTTTTTCGTTCAGAATGACCAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 90 bp ATATTTTCATTCCAAAGCTATAAGAATTATGAGCAGACGAAGCTATaGCTCTGGCGGATGGGCCATTTTGGGAAACAAGATACAAGCAAG +
Preference number: 1 (lower is better)
Translates to: IFSFQSYKNYEQTKL*LWRMGHFGKQDTSK
Trigger: CTTGCTTGTATCTTGTTTCCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTCATAATTCTTATAGCTTTGGAATGAAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CCA 90 bp ATGAGATTTAAACATTTTATCATACTCCCTCTACCAACAACAGCTTaGACAGACCACTTTAGCCCTGGGTCAAGGACTAAAGCCTTTGTT +
Preference number: 1 (lower is better)
Translates to: MRFKHFIILPLPTTA*TDHFSPGSRTKAFV
Trigger: AACAAAGGCTTTAGTCCTTGACCCAGGGCTAAAGTGGTCTGTCCAAGCTGTTGTTGGTAGAGGGAGTATGATAAAATGTTTAAATCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 90 bp GGGCAGGGCTGGCAGGTGCTGTTGTTGGTTTTGAAGAAGCCTGGGTaGCAGGGTGGGCAGTGGGTCTTCACACCAGAGGCAGGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: GQGWQVLLLVLKKPG*QGGQWVFTPEAGSF
Trigger: GAAGCTGCCTGCCTCTGGTGTGAAGACCCACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACCAACAACAGCACCTGCCAGCCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR GCA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCGTGGGTGTTGCAGGATaGTGGCACCCAAATCGCCGC +
Preference number: 2 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCVGVAG*WHPNRR
Trigger: GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
3UTR-3UTR GCA 90 bp CAGGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGCAAACCGAATGCCTGTaGCGAGGGAGTAGCGGCCCT +
Preference number: 2 (lower is better)
Translates to: QAVPLTGPCLGLLRMSSAQTECL*RGSSGP
Trigger: AGGGCCGCTACTCCCTCGGCACAGGCATTCGGTTTG...CGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp CAGGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGGTGTTGCAGGATGCTaGCACCCAAATCGCCGCAGG +
Preference number: 2 (lower is better)
Translates to: QAVPLTGPCLGLLRMSSAGVAGC*HPNRRR
Trigger: CCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC...CGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527501.1
ENST00000527996.5
3UTR-3UTR GCA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTACTTGCAAAGGTGCTATaGAAGGTGAGGAGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLLAKVL*KVRRQV
Trigger: CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAG...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
3UTR-3UTR GCA 90 bp CAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGAAATCGCCGCAGGCTTaGAAAGGTGCTATGCAAGGT +
Preference number: 2 (lower is better)
Translates to: QQWVLQDAGTQIAAGLQRKSPQA*KGAMQG
Trigger: ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT...CCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
3UTR-3UTR GCA 90 bp GATGAGGTCGTCCTCTACATCCTCGCCTTCCATGATGGCGCAGCTGTCAGCTGCCAGAAAGAGGAGCCCTaGTTGTCTGCATACGTGCCA +
Preference number: 2 (lower is better)
Translates to: DEVVLYILAFHDGAAVSCQKEEP*LSAYVP
Trigger: TGGCACGTATGCAGACAAGCAGGGCTCCTCTTTCTG...GCAGCTGACAGCTGCGCCATCATGGAAGGCGAGGATGTAGAGGACGACCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR TCA 90 bp GATGAGGTCGTCCTCTACATCCTCGCCTTCCATGATGGCGCAGCTGTCAGCTGCCATGAAGTCATTGTCTaGGGCTCCAGCAGCTGTGTA +
Preference number: 2 (lower is better)
Translates to: DEVVLYILAFHDGAAVSCHEVIV*GSSSCV
Trigger: TACACAGCTGCTGGAGCCTCAGACAATGACTTCATG...GCAGCTGACAGCTGCGCCATCATGGAAGGCGAGGATGTAGAGGACGACCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR GCA 90 bp GGCAGGAGTGGCAGGTTCCTGAATCTCGGTCAATATAGTAACCAGCAGGACAAGGTGGGTGTTGCAGGATaGTGGCACCCAAATCGCCGC +
Preference number: 2 (lower is better)
Translates to: GRSGRFLNLGQYSNQQDKVGVAG*WHPNRR
Trigger: GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC...CTTGTCCTGCTGGTTACTATATTGACCGAGATTCAGGAACCTGCCACTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp TGCAGCCATCACAGGTCCCATCCGAGCACGTTCCTGGCAGCAGCAAACTTCCAGCAGGCTTGGGTACTTTaGTCCATACTGAGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: CSHHRSHPSTFLAAANFQQAWVL*SILRRL
Trigger: CAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTG...CTGGAAGTTTGCTGCTGCCAGGAACGTGCTCGGATGGGACCTGTGATGGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR TCA 90 bp GGCAGGAGTGGCAGGTTCCTGAATCTCGGTCAATATAGTAACCAGCAGGACAAGGCAGGGGAAGCATTCTaGAGTGTAGGCCACCCCTGT +
Preference number: 2 (lower is better)
Translates to: GRSGRFLNLGQYSNQQDKAGEAF*SVGHPC
Trigger: ACAGGGGTGGCCTACACTTCAGAATGCTTCCCCTGC...CTTGTCCTGCTGGTTACTATATTGACCGAGATTCAGGAACCTGCCACTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp GGTGCTGTTGTTGGTTTTGAAGAAGCCTGGGTTGCAGGGTGGGCAGTGGGTCTTAGAGATTTCCAGCAGTaGGTGTTGCAGGATGCTGGC +
Preference number: 2 (lower is better)
Translates to: GAVVGFEEAWVAGWAVGLRDFQQ*VLQDAG
Trigger: GCCAGCATCCTGCAACACCCACTGCTGGAAATCTCT...AAGACCCACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACCAACAACAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp TGCAGCCATCACAGGTCCCATCCGAGCACGTTCCTGGCAGCAGCAAACTTCCAGCGGAGGTCTAAATCCTaGCACAACCAGAGTGAGAAT +
Preference number: 2 (lower is better)
Translates to: CSHHRSHPSTFLAAANFQRRSKS*HNQSEN
Trigger: ATTCTCACTCTGGTTGTGCCAGGATTTAGACCTCCG...CTGGAAGTTTGCTGCTGCCAGGAACGTGCTCGGATGGGACCTGTGATGGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR TCA 90 bp ATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCTGTCTTCAGCGGCACTaGGTCAAATCCATCAGGAGT +
Preference number: 2 (lower is better)
Translates to: MKRFPAVGVAGCWHPNRRCLQRH*VKSIRS
Trigger: ACTCCTGATGGATTTGACTCAGTGCCGCTGAAGACA...GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527501.1
ENST00000527996.5
3UTR-3UTR TCA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATGAATCCGGAGGTCAGTaGCATTGTCGGTGCACACAG +
Preference number: 2 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNESGGQ*HCRCTQ
Trigger: CTGTGTGCACCGACAATGTCACTGACCTCCGGATTC...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR GCA 90 bp AGCAAGAGTGACAGTGTTTGCCAAAGCGGAGAAGTTGTAGTTGAAAGTCCTGGTGGCAGGCAGCTTCACTaGCCCCTCAAGGTCCTCGCT +
Preference number: 2 (lower is better)
Translates to: SKSDSVCQSGEVVVESPGGRQLH*PLKVLA
Trigger: AGCGAGGACCTTGAGGGGGCAGTGAAGCTGCCTGCC...ACCAGGACTTTCAACTACAACTTCTCCGCTTTGGCAAACACTGTCACTCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp CACCTCCCAGCCTGTCATGCCCTTGTACTCGAAGTTGATCCCACTGAGAACGGTTCACCAGCACAGGCTTaGGTACTTTGGTCCATACTG +
Preference number: 2 (lower is better)
Translates to: HLPACHALVLEVDPTENGSPAQA*VLWSIL
Trigger: CAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGA...ACCGTTCTCAGTGGGATCAACTTCGAGTACAAGGGCATGACAGGCTGGGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CAA 90 bp TTGGAGAACCCTGACTCACCCTCAGGAATCCGGAGGTCAGTGACATaGTCGGTGCACACAGACATTTTCCTACCCTGGTTTCCACAGAGA +
Preference number: 2 (lower is better)
Translates to: LENPDSPSGIRRSVT*SVHTDIFLPWFPQR
Trigger: TCTCTGTGGAAACCAGGGTAGGAAAATGTCTGTGTGCACCGACAATGTCACTGACCTCCGGATTCCTGAGGGTGAGTCAGGGTTCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CAA 90 bp CAGGTGCCTGCAGAGATGCCCACTTTCAGCCAGAAATCTATGGTTTaGCAGATGGTGACTCTCTGCTCAGGCAGAGAAATGCCACCAGAG +
Preference number: 2 (lower is better)
Translates to: QVPAEMPTFSQKSMV*QMVTLCSGREMPPE
Trigger: CTCTGGTGGCATTTCTCTGCCTGAGCAGAGAGTCACCATCTGCAAAACCATAGATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp AGTCTAAGGGCTGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTGAGACAAGCCTCCCGAGTAGCTaGGACTACAGGCACCCGCCA +
Preference number: 2 (lower is better)
Translates to: SLRAVCGLCHKRKLFSETSLPSS*DYRHPP
Trigger: TGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCT...TGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR CCA 90 bp TTTGCCTTTGGAACCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACAGGCTGGCAAAGCCATaGGGCAGCTCATCCCACTCA +
Preference number: 2 (lower is better)
Translates to: FAFGTFPRLHRSVGPRIHRLAKP*GSSSHS
Trigger: TGAGTGGGATGAGCTGCCCCATGGCTTTGCCAGCCT...GTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGGTTCCAAAGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp TCCACACTGTGGAATTCCCATCCTTTCTCTGTGGTCTTCATCCACCTGGAGTCACATCCAGCTCCATGTTaGCTGAGAGGCTGGCAAAGC +
Preference number: 2 (lower is better)
Translates to: STLWNSHPFSVVFIHLESHPAPC*LRGWQS
Trigger: GCTTTGCCAGCCTCTCAGCCAACATGGAGCTGGATG...TGACTCCAGGTGGATGAAGACCACAGAGAAAGGATGGGAATTCCACAGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp CCACTGAGAACGGTCGTTTCCATGTTTGTGGGCAGCGTGTTCCACCATTTGTATCCATATGGGCAGGGCTaGCAGGTGCTGTTGTTGGTT +
Preference number: 2 (lower is better)
Translates to: PLRTVVSMFVGSVFHHLYPYGQG*QVLLLV
Trigger: AACCAACAACAGCACCTGCCAGCCCTGCCCATATGG...ATACAAATGGTGGAACACGCTGCCCACAAACATGGAAACGACCGTTCTCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR GCA 90 bp TTTGCCTTTGGAACCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACGGAGCCCTGCTTGTCTaGATACGTGCCAGGTTTGCA +
Preference number: 2 (lower is better)
Translates to: FAFGTFPRLHRSVGPRIHGALLV*IRARFA
Trigger: TGCAAACCTGGCACGTATGCAGACAAGCAGGGCTCC...GTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGGTTCCAAAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR GCA 90 bp CACCTCCCAGCCTGTCATGCCCTTGTACTCGAAGTTGATCCCACTGAGAACGGTAATAATCTTTGTCTGTaGAAGCTGGGCGCACGTTAC +
Preference number: 2 (lower is better)
Translates to: HLPACHALVLEVDPTENGNNLCL*KLGARY
Trigger: GTAACGTGCGCCCAGCTTGCACAGACAAAGATTATT...ACCGTTCTCAGTGGGATCAACTTCGAGTACAAGGGCATGACAGGCTGGGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp GTCACTTGCAAATGCCATCCCCTTTCTATATCTACCATCTGGTCACCAAATGGTGTCACCCAGGCTGGATaGAGTGCAGTGGCGCGATCT +
Preference number: 2 (lower is better)
Translates to: VTCKCHPLSISTIWSPNGVTQAG*SAVARS
Trigger: AGATCGCGCCACTGCACTCCATCCAGCCTGGGTGAC...ACCATTTGGTGACCAGATGGTAGATATAGAAAGGGGATGGCATTTGCAAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR CCA 90 bp GGCAGGAGTGGCAGGTTCCTGAATCTCGGTCAATATAGTAACCAGCAGGACAAGAGGCCACCCCTGTTATaGCAATGTTTCTCACCAGCA +
Preference number: 2 (lower is better)
Translates to: GRSGRFLNLGQYSNQQDKRPPLL*QCFSPA
Trigger: TGCTGGTGAGAAACATTGCCATAACAGGGGTGGCCT...CTTGTCCTGCTGGTTACTATATTGACCGAGATTCAGGAACCTGCCACTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CAA 90 bp CTGGGCCCAGTGAAAATCTTGTTAAACTCTCCTAGCCTTCCTTCCTaGAAGACTGGTTTGATTCTGGTGCTGGCGTATGGGCCTGGGATT +
Preference number: 2 (lower is better)
Translates to: LGPVKILLNSPSLPS*KTGLILVLAYGPGI
Trigger: AATCCCAGGCCCATACGCCAGCACCAGAATCAAACCAGTCTTCAAGGAAGGAAGGCTAGGAGAGTTTAACAAGATTTTCACTGGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 90 bp TGTCACAAAAGAAAGCTATTCAGTGAGACAGCAGGTGCCCAAGTATaGCTGAGGCTACAGAAGACTTTAGGCTGGAGCTCAGGAGCTGCG +
Preference number: 2 (lower is better)
Translates to: CHKRKLFSETAGAQV*LRLQKTLGWSSGAA
Trigger: CGCAGCTCCTGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACTTGGGCACCTGCTGTCTCACTGAATAGCTTTCTTTTGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 90 bp GATGCTGGAGTCTGGATAGTAGTATTCGAAGTTAACGGTGCCAGATaGCTTCAGGTTGACGGCGTACATCAGTGTGGCTGTGCATTCGTC +
Preference number: 2 (lower is better)
Translates to: DAGVWIVVFEVNGAR*LQVDGVHQCGCAFV
Trigger: GACGAATGCACAGCCACACTGATGTACGCCGTCAACCTGAAGCAATCTGGCACCGTTAACTTCGAATACTACTATCCAGACTCCAGCATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp AATAAGAGACCCCTGTTCCATAATATGGCCCAAACTTCTAGGACGGGGGCACTCTATGGCTCTGGCGGATaGGCCATTTTGGGAAACAAG +
Preference number: 2 (lower is better)
Translates to: NKRPLFHNMAQTSRTGALYGSGG*AILGNK
Trigger: CTTGTTTCCCAAAATGGCCCATCCGCCAGAGCCATA...GAGTGCCCCCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGGGTCTCTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR TCA 90 bp CCACTGAGAACGGTCGTTTCCATGTTTGTGGGCAGCGTGTTCCACCATTTGTATCTGATAAGGCCACAATaGAGAGATTTCCAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: PLRTVVSMFVGSVFHHLYLIRPQ*RDFQQW
Trigger: CCACTGCTGGAAATCTCTTCATTGTGGCCTTATCAG...ATACAAATGGTGGAACACGCTGCCCACAAACATGGAAACGACCGTTCTCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR TCA 90 bp AGACTACCATTTTCACTCCCTTTGAGCTGGTTATCCAGGGGAAATGGATCCAGGGAAGAGATCATGAGCTaGGGGCATGCGAGGAAAACT +
Preference number: 2 (lower is better)
Translates to: RLPFSLPLSWLSRGNGSREEIMS*GHARKT
Trigger: AGTTTTCCTCGCATGCCCTCAGCTCATGATCTCTTC...CCTGGATCCATTTCCCCTGGATAACCAGCTCAAAGGGAGTGAAAATGGTAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR GCA 90 bp TTTGCCTTTGGAACCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACCATACGTGCCAGGTTTaGAGGGGAAGCATTCTGAAG +
Preference number: 2 (lower is better)
Translates to: FAFGTFPRLHRSVGPRIHHTCQV*RGSILK
Trigger: CTTCAGAATGCTTCCCCTGCAAACCTGGCACGTATG...GTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGGTTCCAAAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR GCA 90 bp TTTGCCTTTGGAACCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACTTTATTCTCTGTGTCTaGCATCACCGACTGCGGAGG +
Preference number: 2 (lower is better)
Translates to: FAFGTFPRLHRSVGPRIHFILCV*HHRLRR
Trigger: CCTCCGCAGTCGGTGATGGCAGACACAGAGAATAAA...GTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGGTTCCAAAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp GTCACTTGCAAATGCCATCCCCTTTCTATATCTACCATCTGGTCACCAAATGGTACGAAGCTATGGCTCTaGCGGATGGGCCATTTTGGG +
Preference number: 2 (lower is better)
Translates to: VTCKCHPLSISTIWSPNGTKLWL*RMGHFG
Trigger: CCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGT...ACCATTTGGTGACCAGATGGTAGATATAGAAAGGGGATGGCATTTGCAAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR CCA 90 bp GGTGCTGTTGTTGGTTTTGAAGAAGCCTGGGTTGCAGGGTGGGCAGTGGGTCTTGATGATGCTGGAGTCTaGATAGTAGTATTCGAAGTT +
Preference number: 2 (lower is better)
Translates to: GAVVGFEEAWVAGWAVGLDDAGV*IVVFEV
Trigger: AACTTCGAATACTACTATCCAGACTCCAGCATCATC...AAGACCCACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACCAACAACAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp TTTGCCTTTGGAACCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACTGGTCTTCATCCACCTaGAGTCATCTGCATTGGGCT +
Preference number: 2 (lower is better)
Translates to: FAFGTFPRLHRSVGPRIHWSSST*SHLHWA
Trigger: AGCCCAATGCAGATGACTCCAGGTGGATGAAGACCA...GTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGGTTCCAAAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CAA 90 bp GGCTGCTTGGAGGTAAATGATTTGATCTTCCCAAAGAGTGACTTCTaGCTGGTAAAGATGAGGTCGTCCTCTACATCCTCGCCTTCCATG +
Preference number: 2 (lower is better)
Translates to: GCLEVNDLIFPKSDF*LVKMRSSSTSSPSM
Trigger: CATGGAAGGCGAGGATGTAGAGGACGACCTCATCTTTACCAGCAAGAAGTCACTCTTTGGGAAGATCAAATCATTTACCTCCAAGCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR GCA 90 bp AGTCTAAGGGCTGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTGAGACACTTGCAAAGGTGCTATaGAAGGTGAGGAGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: SLRAVCGLCHKRKLFSETLAKVL*KVRRQV
Trigger: CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAG...TGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR GCA 90 bp AGTCTAAGGGCTGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTGAGACAAGGCCTTGCTCCCCTTaGCCTCAGACTACCATTTTC +
Preference number: 2 (lower is better)
Translates to: SLRAVCGLCHKRKLFSETRPCSP*PQTTIF
Trigger: GAAAATGGTAGTCTGAGGGCAAGGGGAGCAAGGCCT...TGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR GCA 90 bp TACAGGTGCCTGCAGAGATGCCCACTTTCAGCCAGAAATCTATGGTTTTGCAGATGTTGCGTGAGAAGGTaGAATCGTTGTAGCACAGAG +
Preference number: 2 (lower is better)
Translates to: YRCLQRCPLSARNLWFCRCCVRR*NRCSTE
Trigger: CTCTGTGCTACAACGATTGCACCTTCTCACGCAACA...TCTGCAAAACCATAGATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp AGTCTAAGGGCTGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTGAGACAAGAGATTTCCAGCAGTaGGTGTTGCAGGATGCTGGC +
Preference number: 2 (lower is better)
Translates to: SLRAVCGLCHKRKLFSETRDFQQ*VLQDAG
Trigger: GCCAGCATCCTGCAACACCCACTGCTGGAAATCTCT...TGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR CCA 90 bp AATAAGAGACCCCTGTTCCATAATATGGCCCAAACTTCTAGGACGGGGGCACTCGGTTTGCTATGTCTGTaGGTAAACCCAACAGAGGAT +
Preference number: 2 (lower is better)
Translates to: NKRPLFHNMAQTSRTGALGLLCL*VNPTED
Trigger: ATCCTCTGTTGGGTTTACCCACAGACATAGCAAACC...GAGTGCCCCCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGGGTCTCTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR CCA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATTCTAAGGGCTGTCTGTaGCCTTTGTCACAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNSKGCL*PLSQKK
Trigger: TTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGA...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR CCA 90 bp TACAGGTGCCTGCAGAGATGCCCACTTTCAGCCAGAAATCTATGGTTTTGCAGATTGTCAGGGTCACACTaGTGGCAAGAAGTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: YRCLQRCPLSARNLWFCRLSGSH*WQEVSP
Trigger: AGGAGAAACTTCTTGCCACCAGTGTGACCCTGACAA...TCTGCAAAACCATAGATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp TTTGCCTTTGGAACCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACTCGTTTCCATGTTTGTaGGCAGCGTGTTCCACCATT +
Preference number: 2 (lower is better)
Translates to: FAFGTFPRLHRSVGPRIHSFPCL*AACSTI
Trigger: AATGGTGGAACACGCTGCCCACAAACATGGAAACGA...GTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGGTTCCAAAGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CAA 90 bp TACAAAGCCATTGCCAGGGCAGCAGTGGCTAATCAGATGAGCATTTaGTGGCAGACTAGTCACTTGCAAATGCCATCCCCTTTCTATATC +
Preference number: 2 (lower is better)
Translates to: YKAIARAAVANQMSI*WQTSHLQMPSPFYI
Trigger: GATATAGAAAGGGGATGGCATTTGCAAGTGACTAGTCTGCCACAAAATGCTCATCTGATTAGCCACTGCTGCCCTGGCAATGGCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 90 bp GCAGCAGTGGCTAATCAGATGAGCATTTTGTGGCAGACTAGTCACTaGCAAATGCCATCCCCTTTCTATATCTACCATCTGGTCACCAAA +
Preference number: 2 (lower is better)
Translates to: AAVANQMSILWQTSH*QMPSPFYIYHLVTK
Trigger: TTTGGTGACCAGATGGTAGATATAGAAAGGGGATGGCATTTGCAAGTGACTAGTCTGCCACAAAATGCTCATCTGATTAGCCACTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR CCA 90 bp AGTCTAAGGGCTGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTGAGACATCCTTCCTTGAAGACTaGTTTGATTCTGGTGCTGGC +
Preference number: 2 (lower is better)
Translates to: SLRAVCGLCHKRKLFSETSFLED*FDSGAG
Trigger: GCCAGCACCAGAATCAAACCAGTCTTCAAGGAAGGA...TGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 90 bp AAAATCTTGTTAAACTCTCCTAGCCTTCCTTCCTTGAAGACTGGTTaGATTCTGGTGCTGGCGTATGGGCCTGGGATTCAGTTCCTTTTT +
Preference number: 2 (lower is better)
Translates to: KILLNSPSLPSLKTG*ILVLAYGPGIQFLF
Trigger: AAAAAGGAACTGAATCCCAGGCCCATACGCCAGCACCAGAATCAAACCAGTCTTCAAGGAAGGAAGGCTAGGAGAGTTTAACAAGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 90 bp AGTATTTGTCAGGGTCACACTGGTGGCAAGAAGTTTCTCCTTTATTaGAATAAGAGTTGGCTGGGCAAAGTTTGCAGAAAGAGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: SICQGHTGGKKFLLY*NKSWLGKVCRKRSP
Trigger: AGGGCTCCTCTTTCTGCAAACTTTGCCCAGCCAACTCTTATTCAAATAAAGGAGAAACTTCTTGCCACCAGTGTGACCCTGACAAATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CCA 90 bp CTGCTTGAATACACCACAATCTTCATTTGTATTCCCAGCCAAATACAGATGATGCCCTGTTCCATAATATaGCCCAAACTTCTAGGACGG +
Preference number: 2 (lower is better)
Translates to: LLEYTTIFICIPSQIQMMPCSII*PKLLGR
Trigger: CCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGG...CATCATCTGTATTTGGCTGGGAATACAAATGAAGATTGTGGTGTATTCAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR TCA 90 bp CTGCTTGAATACACCACAATCTTCATTTGTATTCCCAGCCAAATACAGATGATGCGTTTATTCTGTGCCTaGGCAGATGCGTTAAGCTTA +
Preference number: 2 (lower is better)
Translates to: LLEYTTIFICIPSQIQMMRLFCA*ADALSL
Trigger: TAAGCTTAACGCATCTGCTCAGGCACAGAATAAACG...CATCATCTGTATTTGGCTGGGAATACAAATGAAGATTGTGGTGTATTCAAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 90 bp ATTGAACATGTGTTTGCTCTCAAGTGGGCGGACAACTCTGTGAGTTaGCTGAAAACCATTGAATCGTATGTTTTAAAGGTGAATTGTGTA +
Preference number: 2 (lower is better)
Translates to: IEHVFALKWADNSVS*LKTIESYVLKVNCV
Trigger: TACACAATTCACCTTTAAAACATACGATTCAATGGTTTTCAGCAAACTCACAGAGTTGTCCGCCCACTTGAGAGCAAACACATGTTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 90 bp TGTATCCACCAGGGCTTTGGGCATTTTCTTGATGAACTTATTCCTTaGGCTTCAGTGAGAATATCTATCATTTACTTAAGAGAAGGCAAT +
Preference number: 2 (lower is better)
Translates to: CIHQGFGHFLDELIP*ASVRISIIYLREGN
Trigger: ATTGCCTTCTCTTAAGTAAATGATAGATATTCTCACTGAAGCCAAAGGAATAAGTTCATCAAGAAAATGCCCAAAGCCCTGGTGGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR GCA 72 bp GGGGCAGCTCATCCCACTCATCAAACCGAATGCCTGTaGCGAGGGAGTAGCGGCCCTCAGCGCATGGCTTAC +
Preference number: 3 (lower is better)
Translates to: GAAHPTHQTECL*RGSSGPQRMAY
Trigger: GTAAGCCATGCGCTGAGGGCCGCTACTCCCTCGGCACAGGCATTCGGTTTGATGAGTGGGATGAGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 72 bp AGCCATGGGGCAGCTCATCCCACTCATCAAACCGAATaGCTGTGCCGAGGGAGTAGCGGCCCTCAGCGCATG +
Preference number: 3 (lower is better)
Translates to: SHGAAHPTHQTE*LCRGSSGPQRM
Trigger: CATGCGCTGAGGGCCGCTACTCCCTCGGCACAGGCATTCGGTTTGATGAGTGGGATGAGCTGCCCCATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp CGGCGTACATCAGTGTGGCTGTGCATTCGTCCGTGTTaGAGGCGATGTAGTCGCCCCGGGGAACCCACTTGG +
Preference number: 3 (lower is better)
Translates to: RRTSVWLCIRPC*RRCSRPGEPTW
Trigger: CCAAGTGGGTTCCCCGGGGCGACTACATCGCCTCCAACACGGACGAATGCACAGCCACACTGATGTACGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp CGGTGGACTCAGCAGCACTGTCATCCAGCTCCATGTTaGCTGAGAGGCTGGCAAAGCCATGGGGCAGCTCAT +
Preference number: 3 (lower is better)
Translates to: RWTQQHCHPAPC*LRGWQSHGAAH
Trigger: ATGAGCTGCCCCATGGCTTTGCCAGCCTCTCAGCCAACATGGAGCTGGATGACAGTGCTGCTGAGTCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp CCCGGGGAACCCACTTGGACGAAGTACAGTTCCCGGTaGACTCAGCAGCACTGTCATCCAGCTCCATGTTGG +
Preference number: 3 (lower is better)
Translates to: PGEPTWTKYSSR*TQQHCHPAPCW
Trigger: CCAACATGGAGCTGGATGACAGTGCTGCTGAGTCCACCGGGAACTGTACTTCGTCCAAGTGGGTTCCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CAA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGCAAATCGCCGCAGGCTaGCAAAGGTGCTATGCAAGG +
Preference number: 3 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQQIAAG*QRCYAR
Trigger: CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTG...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
3UTR-3UTR CAA 90 bp CAGGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGCAAATCGCCGCAGGCTaGCAAAGGTGCTATGCAAGG +
Preference number: 3 (lower is better)
Translates to: QAVPLTGPCLGLLRMSSAQIAAG*QRCYAR
Trigger: CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTG...CGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527501.1
ENST00000527996.5
3UTR TCA 72 bp CACCCCAATAAGTCGATCAGCAAGGCTGACAGGCTGTaGGGAAACCCCGGCCTTGTAGCCTGTCACCTCTGG +
Preference number: 3 (lower is better)
Translates to: HPNKSISKADRL*GNPGLVACHLW
Trigger: CCAGAGGTGACAGGCTACAAGGCCGGGGTTTCCTCACAGCCTGTCAGCCTTGCTGATCGACTTATTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 72 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTaGAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAG +
Preference number: 3 (lower is better)
Translates to: CCRMLAPKSPQA*KGAMQGEEAGE
Trigger: CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
3UTR CCA 72 bp GGGCTGGCAGGTGCTGTTGTTGGTTTTGAAGAAGCCTaGGTTGCAGGGTGGGCAGTGGGTCTTCACACCAGA +
Preference number: 3 (lower is better)
Translates to: GLAGAVVGFEEA*VAGWAVGLHTR
Trigger: TCTGGTGTGAAGACCCACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACCAACAACAGCACCTGCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CAA 90 bp GATGAGGTCGTCCTCTACATCCTCGCCTTCCATGATGGCGCAGCTGTCAGCTGCGTCTCCACAGGAGTGTaGGTCCTAGAATTCACACCC +
Preference number: 3 (lower is better)
Translates to: DEVVLYILAFHDGAAVSCVSTGV*VLEFTP
Trigger: GGGTGTGAATTCTAGGACCAACACTCCTGTGGAGAC...GCAGCTGACAGCTGCGCCATCATGGAAGGCGAGGATGTAGAGGACGACCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 72 bp AAGAGGAGCCCTGCTTGTCTGCATACGTGCCAGGTTTaGAGGGGAAGCATTCTGAAGTGTAGGCCACCCCTG +
Preference number: 3 (lower is better)
Translates to: KRSPACLHTCQV*RGSILKCRPPL
Trigger: CAGGGGTGGCCTACACTTCAGAATGCTTCCCCTGCAAACCTGGCACGTATGCAGACAAGCAGGGCTCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp CAGCACTGTCATCCAGCTCCATGTTGGCTGAGAGGCTaGCAAAGCCATGGGGCAGCTCATCCCACTCATCAA +
Preference number: 3 (lower is better)
Translates to: QHCHPAPCWLRG*QSHGAAHPTHQ
Trigger: TTGATGAGTGGGATGAGCTGCCCCATGGCTTTGCCAGCCTCTCAGCCAACATGGAGCTGGATGACAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp GCTGTTGTTGGTTTTGAAGAAGCCTGGGTTGCAGGGTaGGCAGTGGGTCTTCACACCAGAGGCAGGCAGCTT +
Preference number: 3 (lower is better)
Translates to: AVVGFEEAWVAG*AVGLHTRGRQL
Trigger: AAGCTGCCTGCCTCTGGTGTGAAGACCCACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACCAACAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 72 bp TCCTCACCCAGCCTCTCTCCTGAAGAGATCATGAGCTaGGGGCATGCGAGGAAAACTCCCAGCTGTTTCTGC +
Preference number: 3 (lower is better)
Translates to: SSPSLSPEEIMS*GHARKTPSCFC
Trigger: GCAGAAACAGCTGGGAGTTTTCCTCGCATGCCCTCAGCTCATGATCTCTTCAGGAGAGAGGCTGGGTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR GCA 72 bp GAGTTGGCTGGGCAAAGTTTGCAGAAAGAGGAGCCCTaGTTGTCTGCATACGTGCCAGGTTTGCAGGGGAAG +
Preference number: 3 (lower is better)
Translates to: ELAGQSLQKEEP*LSAYVPGLQGK
Trigger: CTTCCCCTGCAAACCTGGCACGTATGCAGACAAGCAGGGCTCCTCTTTCTGCAAACTTTGCCCAGCCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CAA 90 bp ATGTCTTCAGCGGCACTGAGTCAAATCCATCAGGAGTCCTCCACCCACACAAAGCCTCCCAGCTCAGAATaGCTCAGTGGGGAACAGCTG +
Preference number: 3 (lower is better)
Translates to: MSSAALSQIHQESSTHTKPPSSE*LSGEQL
Trigger: CAGCTGTTCCCCACTGAGCAATTCTGAGCTGGGAGG...CTTTGTGTGGGTGGAGGACTCCTGATGGATTTGACTCAGTGCCGCTGAAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527501.1
3UTR TCA 72 bp AGCTGGTTATCCAGGGGAAATGGATCCAGGCTGCTATaGAGATTATCCACCAGGGAACCCCGACACCCTCCT +
Preference number: 3 (lower is better)
Translates to: SWLSRGNGSRLL*RLSTREPRHPP
Trigger: AGGAGGGTGTCGGGGTTCCCTGGTGGATAATCTTCATAGCAGCCTGGATCCATTTCCCCTGGATAACCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR GCA 72 bp ACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATaGTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTG +
Preference number: 3 (lower is better)
Translates to: TMKRFPAVGVAG*WHPNRRRLAKV
Trigger: CACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
3UTR GCA 72 bp TACATCCTCGCCTTCCATGATGGCGCAGCTGTCAGCTaGTGGCAGGTCACAGTCCTTGAGAGTAGCATTCAT +
Preference number: 3 (lower is better)
Translates to: YILAFHDGAAVS*WQVTVLESSIH
Trigger: ATGAATGCTACTCTCAAGGACTGTGACCTGCCAGCAGCTGACAGCTGCGCCATCATGGAAGGCGAGGATGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp ATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTaGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTA +
Preference number: 3 (lower is better)
Translates to: MKRFPAVGVAGC*HPNRRRLAKVL
Trigger: TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
3UTR CCA 72 bp GCCCAAGTATTGCTGAGGCTACAGAAGACTTTAGGCTaGAGCTCAGGAGCTGCGTATCTGCATCCACACTGG +
Preference number: 3 (lower is better)
Translates to: AQVLLRLQKTLG*SSGAAYLHPHW
Trigger: CCAGTGTGGATGCAGATACGCAGCTCCTGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACTTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR CAA 90 bp TGCAGCCATCACAGGTCCCATCCGAGCACGTTCCTGGCAGCAGCAAACTTCCAGCTACAGATTTTCGGCTaGGCCCATTTGTACATGAGT +
Preference number: 3 (lower is better)
Translates to: CSHHRSHPSTFLAAANFQLQIFG*AHLYMS
Trigger: ACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAG...CTGGAAGTTTGCTGCTGCCAGGAACGTGCTCGGATGGGACCTGTGATGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 72 bp AGAACCCTGACTCACCCTCAGGAATCCGGAGGTCAGTaGCATTGTCGGTGCACACAGACATTTTCCTACCCT +
Preference number: 3 (lower is better)
Translates to: RTLTHPQESGGQ*HCRCTQTFSYP
Trigger: AGGGTAGGAAAATGTCTGTGTGCACCGACAATGTCACTGACCTCCGGATTCCTGAGGGTGAGTCAGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 72 bp CTGGCAGACGTAGGCTGTGATAGATTTGGAGAACCCTaGCTCACCCTCAGGAATCCGGAGGTCAGTGACATT +
Preference number: 3 (lower is better)
Translates to: LADVGCDRFGEP*LTLRNPEVSDI
Trigger: AATGTCACTGACCTCCGGATTCCTGAGGGTGAGTCAGGGTTCTCCAAATCTATCACAGCCTACGTCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 72 bp AGTTTTCTGTGGACTGCACCTGACGCGGATGGTGGTTaGTCTCCCAGAACTGCAGGACTGGGTCACATCATT +
Preference number: 3 (lower is better)
Translates to: SFLWTAPDADGG*SPRTAGLGHII
Trigger: AATGATGTGACCCAGTCCTGCAGTTCTGGGAGATCAACCACCATCCGCGTCAGGTGCAGTCCACAGAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 72 bp GTTTGCAGAAAGAGGAGCCCTGCTTGTCTGCATACGTaGCAGGTTTGCAGGGGAAGCATTCTGAAGTGTAGG +
Preference number: 3 (lower is better)
Translates to: VCRKRSPACLHT*QVCRGSILKCR
Trigger: CCTACACTTCAGAATGCTTCCCCTGCAAACCTGGCACGTATGCAGACAAGCAGGGCTCCTCTTTCTGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 72 bp AATCTCGGTCAATATAGTAACCAGCAGGACAAGAGGTaGAGGAGGAGCCCACATCAGAGGCTTCTAGGGCAC +
Preference number: 3 (lower is better)
Translates to: NLGQYSNQQDKR*RRSPHQRLLGH
Trigger: GTGCCCTAGAAGCCTCTGATGTGGGCTCCTCCTGCACCTCTTGTCCTGCTGGTTACTATATTGACCGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CAA 90 bp AGACTACCATTTTCACTCCCTTTGAGCTGGTTATCCAGGGGAAATGGATCCAGGCAAATCGCCGCAGGCTaGCAAAGGTGCTATGCAAGG +
Preference number: 3 (lower is better)
Translates to: RLPFSLPLSWLSRGNGSRQIAAG*QRCYAR
Trigger: CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTG...CCTGGATCCATTTCCCCTGGATAACCAGCTCAAAGGGAGTGAAAATGGTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR CAA 90 bp AGCAAGAGTGACAGTGTTTGCCAAAGCGGAGAAGTTGTAGTTGAAAGTCCTGGTTTCCAGCAGTGGGTGTaGCAGGATGCTGGCACCCAA +
Preference number: 3 (lower is better)
Translates to: SKSDSVCQSGEVVVESPGFQQWV*QDAGTQ
Trigger: TTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAA...ACCAGGACTTTCAACTACAACTTCTCCGCTTTGGCAAACACTGTCACTCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CAA 90 bp AGCAAGAGTGACAGTGTTTGCCAAAGCGGAGAAGTTGTAGTTGAAAGTCCTGGTCGGTCGTTTCCATGTTaGTGGGCAGCGTGTTCCACC +
Preference number: 3 (lower is better)
Translates to: SKSDSVCQSGEVVVESPGRSFPC*WAACST
Trigger: GGTGGAACACGCTGCCCACAAACATGGAAACGACCG...ACCAGGACTTTCAACTACAACTTCTCCGCTTTGGCAAACACTGTCACTCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CAA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCACAGAGAGTGGATCTaGTTGTTCTTGGTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNHREWI*LFLVPG
Trigger: TCCAGGGACCAAGAACAACAAGATCCACTCTCTGTG...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp CCCCTGTTATGGCAATGTTTCTCACCAGCACAGGCTTaGGTACTTTGGTCCATACTGAGAAGGCTGTGGTTC +
Preference number: 3 (lower is better)
Translates to: PLLWQCFSPAQA*VLWSILRRLWF
Trigger: GAACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGAGAAACATTGCCATAACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp AAGAAGATCACGTCCGGTATTCCCAAGGACTCCAGGTaGAAAAGTTCAGCTGGGGAGGTGATTCCATCCAGA +
Preference number: 3 (lower is better)
Translates to: KKITSGIPKDSR*KSSAGEVIPSR
Trigger: TCTGGATGGAATCACCTCCCCAGCTGAACTTTTCCACCTGGAGTCCTTGGGAATACCGGACGTGATCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 72 bp CCACTTTCAGCCAGAAATCTATGGTTTTGCAGATGGTaGCTCTCTGCTCAGGCAGAGAAATGCCACCAGAGC +
Preference number: 3 (lower is better)
Translates to: PLSARNLWFCRW*LSAQAEKCHQS
Trigger: GCTCTGGTGGCATTTCTCTGCCTGAGCAGAGAGTCACCATCTGCAAAACCATAGATTTCTGGCTGAAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 72 bp TCAGGCCCATGCCATTGTGGGCTGTATCCCCTAAAGTaGCCCATTAAAATCTTGGCCTCCTTGTGCTCTTTT +
Preference number: 3 (lower is better)
Translates to: SGPCHCGLYPLK*PIKILASLCSF
Trigger: AAAAGAGCACAAGGAGGCCAAGATTTTAATGGGGCACTTTAGGGGATACAGCCCACAATGGCATGGGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR GCA 72 bp AAATGTGATTCTGGCCACCTCTTTATTCTCTGTGTCTaGCATCACCGACTGCGGAGGTCTAAATCCTGGCAC +
Preference number: 3 (lower is better)
Translates to: KCDSGHLFILCV*HHRLRRSKSWH
Trigger: GTGCCAGGATTTAGACCTCCGCAGTCGGTGATGGCAGACACAGAGAATAAAGAGGTGGCCAGAATCACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 72 bp AGTGAAGCTTGGCCCTCCAGCAAGAGTGACAGTGTTTaGCAAAGCGGAGAAGTTGTAGTTGAAAGTCCTGGT +
Preference number: 3 (lower is better)
Translates to: SEAWPSSKSDSV*QSGEVVVESPG
Trigger: ACCAGGACTTTCAACTACAACTTCTCCGCTTTGGCAAACACTGTCACTCTTGCTGGAGGGCCAAGCTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp TTAGCTCCACACTGTGGAATTCCCATCCTTTCTCTGTaGTCTTCATCCACCTGGAGTCATCTGCATTGGGCT +
Preference number: 3 (lower is better)
Translates to: LAPHCGIPILSL*SSSTWSHLHWA
Trigger: AGCCCAATGCAGATGACTCCAGGTGGATGAAGACCACAGAGAAAGGATGGGAATTCCACAGTGTGGAGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp CGGTATTCCCAAGGACTCCAGGTGGAAAAGTTCAGCTaGGGAGGTGATTCCATCCAGAGTCATATCTGTTGT +
Preference number: 3 (lower is better)
Translates to: RYSQGLQVEKFS*GGDSIQSHICC
Trigger: ACAACAGATATGACTCTGGATGGAATCACCTCCCCAGCTGAACTTTTCCACCTGGAGTCCTTGGGAATACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 72 bp ACAAAGCCATTGCCAGGGCAGCAGTGGCTAATCAGATaGGCATTTTGTGGCAGACTAGTCACTTGCAAATGC +
Preference number: 3 (lower is better)
Translates to: TKPLPGQQWLIR*AFCGRLVTCKC
Trigger: GCATTTGCAAGTGACTAGTCTGCCACAAAATGCTCATCTGATTAGCCACTGCTGCCCTGGCAATGGCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR TCA 72 bp TGGCACAACCAGAGTGAGAATCATGAAGTCATTGTCTaGGGCTCCAGCAGCTGTGTAAATGTGATCACCAGC +
Preference number: 3 (lower is better)
Translates to: WHNQSENHEVIV*GSSSCVNVITS
Trigger: GCTGGTGATCACATTTACACAGCTGCTGGAGCCTCAGACAATGACTTCATGATTCTCACTCTGGTTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 72 bp CAGAATTGTGTTAGTGGGGCAGGAGTGGCAGGTTCCTaGATCTCGGTCAATATAGTAACCAGCAGGACAAGA +
Preference number: 3 (lower is better)
Translates to: QNCVSGAGVAGS*ISVNIVTSRTR
Trigger: TCTTGTCCTGCTGGTTACTATATTGACCGAGATTCAGGAACCTGCCACTCCTGCCCCACTAACACAATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR TCA 72 bp GAAGTTGTAGTTGAAAGTCCTGGTCGGAGTGTTGCGTaGGAAGGTGCAATCGTTGTAGCACAGAGAGTGGAT +
Preference number: 3 (lower is better)
Translates to: EVVVESPGRSVA*EGAIVVAQRVD
Trigger: ATCCACTCTCTGTGCTACAACGATTGCACCTTCTCACGCAACACTCCGACCAGGACTTTCAACTACAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR GCA 72 bp TCCTTTCTCTGTGGTCTTCATCCACCTGGAGTCATCTaGATTGGGCTGGCACTGGTCATTCTGAACGAAAAA +
Preference number: 3 (lower is better)
Translates to: SFLCGLHPPGVI*IGLALVILNEK
Trigger: TTTTTCGTTCAGAATGACCAGTGCCAGCCCAATGCAGATGACTCCAGGTGGATGAAGACCACAGAGAAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp AGAATTATGAGCAGACGAAGCTATGGCTCTGGCGGATaGGCCATTTTGGGAAACAAGATACAAGCAAGGGCA +
Preference number: 3 (lower is better)
Translates to: RIMSRRSYGSGG*AILGNKIQARA
Trigger: TGCCCTTGCTTGTATCTTGTTTCCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTCATAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CCA 72 bp ACTTGCAAATGCCATCCCCTTTCTATATCTACCATCTaGTCACCAAATGGTCACTGGAGAAAGGGCACAGGC +
Preference number: 3 (lower is better)
Translates to: TCKCHPLSISTI*SPNGHWRKGTG
Trigger: GCCTGTGCCCTTTCTCCAGTGACCATTTGGTGACCAGATGGTAGATATAGAAAGGGGATGGCATTTGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CCA 72 bp TCTCTGTGGTCTTCATCCACCTGGAGTCATCTGCATTaGGCTGGCACTGGTCATTCTGAACGAAAAACTCAA +
Preference number: 3 (lower is better)
Translates to: SLWSSSTWSHLH*AGTGHSERKTQ
Trigger: TTGAGTTTTTCGTTCAGAATGACCAGTGCCAGCCCAATGCAGATGACTCCAGGTGGATGAAGACCACAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp TGGCAATGTTTCTCACCAGCACAGGCTTGGGTACTTTaGTCCATACTGAGAAGGCTGTGGTTCTCCAATAGA +
Preference number: 3 (lower is better)
Translates to: WQCFSPAQAWVL*SILRRLWFSNR
Trigger: TCTATTGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGAGAAACATTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CAA 90 bp GGTGCCCAAGTATTGCTGAGGCTACAGAAGACTTTAGGCTGGAGCTCAGGAGCTCAAAAACATTCCTTGTaGCCTCTCTTTGTGCTTTTC +
Preference number: 3 (lower is better)
Translates to: GAQVLLRLQKTLGWSSGAQKHSL*PLFVLF
Trigger: GAAAAGCACAAAGAGAGGCAACAAGGAATGTTTTTG...AGCTCCTGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACTTGGGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR TCA 72 bp TGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTaGGACAGCAGGTGCCCAAGTATTGCTGAGGCTACA +
Preference number: 3 (lower is better)
Translates to: CLWPLSQKKAIQ*DSRCPSIAEAT
Trigger: TGTAGCCTCAGCAATACTTGGGCACCTGCTGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR GCA 72 bp CTGAGAAGGCTGTGGTTCTCCAATAGAGGACATTATTaGCTCGATTTAGCTCCACACTGTGGAATTCCCATC +
Preference number: 3 (lower is better)
Translates to: LRRLWFSNRGHY*LDLAPHCGIPI
Trigger: GATGGGAATTCCACAGTGTGGAGCTAAATCGAGGCAATAATGTCCTCTATTGGAGAACCACAGCCTTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp AGCTATAAGAATTATGAGCAGACGAAGCTATGGCTCTaGCGGATGGGCCATTTTGGGAAACAAGATACAAGC +
Preference number: 3 (lower is better)
Translates to: SYKNYEQTKLWL*RMGHFGKQDTS
Trigger: GCTTGTATCTTGTTTCCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTCATAATTCTTATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CCA 72 bp CAGGCTTGGGTACTTTGGTCCATACTGAGAAGGCTGTaGTTCTCCAATAGAGGACATTATTGCCTCGATTTA +
Preference number: 3 (lower is better)
Translates to: QAWVLWSILRRL*FSNRGHYCLDL
Trigger: TAAATCGAGGCAATAATGTCCTCTATTGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR-3UTR CAA 90 bp TTTGCCTTTGGAACCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACAAGTTTCTCCTTTATTaGAATAAGAGTTGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: FAFGTFPRLHRSVGPRIHKFLLY*NKSWLG
Trigger: GCCCAGCCAACTCTTATTCAAATAAAGGAGAAACTT...GTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGGTTCCAAAGGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CCA 72 bp TTCCAAAGCTATAAGAATTATGAGCAGACGAAGCTATaGCTCTGGCGGATGGGCCATTTTGGGAAACAAGAT +
Preference number: 3 (lower is better)
Translates to: FQSYKNYEQTKL*LWRMGHFGKQD
Trigger: ATCTTGTTTCCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTCATAATTCTTATAGCTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR CAA 90 bp CTGCTTGAATACACCACAATCTTCATTTGTATTCCCAGCCAAATACAGATGATGTGGCAGACTAGTCACTaGCAAATGCCATCCCCTTTC +
Preference number: 3 (lower is better)
Translates to: LLEYTTIFICIPSQIQMMWQTSH*QMPSPF
Trigger: GAAAGGGGATGGCATTTGCAAGTGACTAGTCTGCCA...CATCATCTGTATTTGGCTGGGAATACAAATGAAGATTGTGGTGTATTCAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR TCA 72 bp TGTATTCCCAGCCAAATACAGATGATGTCTATAGCATaGCAGTTACTGCATGTTCCAGGACTCAAGGTAACC +
Preference number: 3 (lower is better)
Translates to: CIPSQIQMMSIA*QLLHVPGLKVT
Trigger: GGTTACCTTGAGTCCTGGAACATGCAGTAACTGTCATGCTATAGACATCATCTGTATTTGGCTGGGAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CCA 72 bp AAACATTTTATCATACTCCCTCTACCAACAACAGCTTaGACAGACCACTTTAGCCCTGGGTCAAGGACTAAA +
Preference number: 3 (lower is better)
Translates to: KHFIILPLPTTA*TDHFSPGSRTK
Trigger: TTTAGTCCTTGACCCAGGGCTAAAGTGGTCTGTCCAAGCTGTTGTTGGTAGAGGGAGTATGATAAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR-3UTR CAA 90 bp GTCACTTGCAAATGCCATCCCCTTTCTATATCTACCATCTGGTCACCAAATGGTGCTTTGGGCATTTTCTaGATGAACTTATTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: VTCKCHPLSISTIWSPNGALGIF*MNLFLW
Trigger: CCAAAGGAATAAGTTCATCAAGAAAATGCCCAAAGC...ACCATTTGGTGACCAGATGGTAGATATAGAAAGGGGATGGCATTTGCAAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CCA 72 bp ATTCTGAACGAAAAACTCAAAGATGATGCTGGAGTCTaGATAGTAGTATTCGAAGTTAACGGTGCCAGATTG +
Preference number: 3 (lower is better)
Translates to: ILNEKLKDDAGV*IVVFEVNGARL
Trigger: CAATCTGGCACCGTTAACTTCGAATACTACTATCCAGACTCCAGCATCATCTTTGAGTTTTTCGTTCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCCACAGGCCCGGGGTATaGGGCACGGCGACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCHRPGV*GTATLH
Trigger: GTGGAGGGTCGCCGTGCCGCATACCCCGGGCCTGTG...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR GCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCGCCACAGCCGGGGTATaGGCCTCTCAGTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGATAGV*ASQFFP
Trigger: GGGGAAGAACTGAGAGGCGCATACCCCGGCTGTGGC...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTCACAGGCCCGGGGTATaGGGCACGGCGACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGHRPGV*GTATLH
Trigger: GTGGAGGGTCGCCGTGCCGCATACCCCGGGCCTGTG...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR GCA 90 bp CCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGGGTCAGGCAGGCTGGTaGACAGGCCCGGGGTATGCG +
Preference number: 4 (lower is better)
Translates to: PNRRRLAKVLCKVRRQVRGQAGW*TGPGYA
Trigger: CGCATACCCCGGGCCTGTGCACCAGCCTGCCTGACC...CCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR GCA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCGGTCAGGCAGGCTGGTaGACAGGCCCGGGGTATGCG +
Preference number: 4 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCGQAGW*TGPGYA
Trigger: CGCATACCCCGGGCCTGTGCACCAGCCTGCCTGACC...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR CCA 90 bp CAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGGTTCCCTGGGTCACCTaGAAGGCGGTCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QQWVLQDAGTQIAAGLQRVPWVT*KAVPAQ
Trigger: CTGGGCTGGGACCGCCTTCCAGGTGACCCAGGGAAC...CCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCCGGCGACCCTCCACCTaGAACCCGTGCTGTCACACG +
Preference number: 4 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCRRPST*NPCCHT
Trigger: CGTGTGACAGCACGGGTTCCAGGTGGAGGGTCGCCG...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR TCA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGAGCACTCGGTGCCCTTaGTGGGGTCAGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQSTRCP*WGQAGW
Trigger: CCAGCCTGCCTGACCCCATCAAGGGCACCGAGTGCT...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR GCA 90 bp CAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGGGCAGGCAGCTTCACTaGCCCCTCAAGGTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: QQWVLQDAGTQIAAGLQRGRQLH*PLKVLA
Trigger: AGCGAGGACCTTGAGGGGGCAGTGAAGCTGCCTGCC...CCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR GCA 90 bp CGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGGGTGTTGCAGGATaGTGGCACCCAAATCGCCGC +
Preference number: 4 (lower is better)
Translates to: RRRLAKVLCKVRRQVRQAVGVAG*WHPNRR
Trigger: GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC...TGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCGCCACCTCAGGCCCATaGCATTGTGGGCTGTATCCC +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGATSGP*HCGLYP
Trigger: GGGATACAGCCCACAATGGCATGGGCCTGAGGTGGC...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp TGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGGTTCCCTGGGTCACCTaGAAGGCGGTCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: CWHPNRRRLAKVLCKVRRVPWVT*KAVPAQ
Trigger: CTGGGCTGGGACCGCCTTCCAGGTGACCCAGGGAAC...CCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGTCCGGTCCCGTTCCCTaGGTCACCTGGAAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRSGPVP*VTWKAV
Trigger: GACCGCCTTCCAGGTGACCCAGGGAACGGGACCGGA...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGCGGCGACCCTCCACCTaGAACCCGTGCTGTCACACG +
Preference number: 4 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQRRPST*NPCCHT
Trigger: CGTGTGACAGCACGGGTTCCAGGTGGAGGGTCGCCG...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR TCA 90 bp CATCCCACTCATCAAACCGAATGCCTGTGCCGAGGGAGTAGCGGCCCTCAGCGCGTCGATCAGCAAGGCTaGCAGGCTGTGAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: HPTHQTECLCRGSSGPQRVDQQG*QAVRKP
Trigger: GGGTTTCCTCACAGCCTGTCAGCCTTGCTGATCGAC...GCGCTGAGGGCCGCTACTCCCTCGGCACAGGCATTCGGTTTGATGAGTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGCAGGTCAAGACGGTaGGCAGGATGGCAGTACAGG +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGSRSRR*AGWQYR
Trigger: CCTGTACTGCCATCCTGCTCACCGTCTTGACCTGCT...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGGGCAGGCAGCTTCACTaGCCCCTCAAGGTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: GCCRMLAPKSPQACKGAMGRQLH*PLKVLA
Trigger: AGCGAGGACCTTGAGGGGGCAGTGAAGCTGCCTGCC...CATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGGCAGGCAGCTTCACTaGCCCCTCAAGGTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQGRQLH*PLKVLA
Trigger: AGCGAGGACCTTGAGGGGGCAGTGAAGCTGCCTGCC...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGCGTGGGTGTTGCAGGATaGTGGCACCCAAATCGCCGC +
Preference number: 4 (lower is better)
Translates to: GSASHRSMSRPPEDVFSGVGVAG*WHPNRR
Trigger: GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC...GCCGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527501.1
ENST00000527996.5
CDS-3UTR GCA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCCCCGACCTCATGATCTaGCCGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCPDLMI*PPRPPK
Trigger: TTTGGGAGGCCGAGGCGGGCAGATCATGAGGTCGGG...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp ATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCGCCACAGCCGGGGTATaGGCCTCTCAGTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: ISSSGCCRMLAPKSPQACATAGV*ASQFFP
Trigger: GGGGAAGAACTGAGAGGCGCATACCCCGGCTGTGGC...GCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR GCA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGCAAACCGAATGCCTGTaGCGAGGGAGTAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVQTECL*RGSSGP
Trigger: AGGGCCGCTACTCCCTCGGCACAGGCATTCGGTTTG...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCCTGGGTTGCAGGGTaGGCAGTGGGTCTTCACACC +
Preference number: 4 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQAWVAG*AVGLHT
Trigger: GGTGTGAAGACCCACTGCCCACCCTGCAACCCAGGC...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGTCCGGTCCCGTTCCCTaGGTCACCTGGAAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: RMLAPKSPQACKGAMQGESGPVP*VTWKAV
Trigger: GACCGCCTTCCAGGTGACCCAGGGAACGGGACCGGA...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGGCTGGCAAAGCCATaGGGCAGCTCATCCCACTCA +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGRLAKP*GSSSHS
Trigger: TGAGTGGGATGAGCTGCCCCATGGCTTTGCCAGCCT...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GGCTGTGCATTCGTCCGTGTTGGAGGCGATGTAGTCGCCCCGGGGAACCCACTTTGCATTCGTCCGTGTTaGAGGCGATGTAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: GCAFVRVGGDVVAPGNPLCIRPC*RRCSRP
Trigger: GGGGCGACTACATCGCCTCCAACACGGACGAATGCA...AAGTGGGTTCCCCGGGGCGACTACATCGCCTCCAACACGGACGAATGCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGGTCGATCAGCAAGGCTaGCAGGCTGTGAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVVDQQG*QAVRKP
Trigger: GGGTTTCCTCACAGCCTGTCAGCCTTGCTGATCGAC...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp CAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGGACGCGGATGGTGGTTaGTCTCCCAGAACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QQWVLQDAGTQIAAGLQRDADGG*SPRTAG
Trigger: TCCTGCAGTTCTGGGAGATCAACCACCATCCGCGTC...CCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR TCA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAATGGTAGTCAGCCACTaGGCAGAGCGGGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LAPKSPQACKGAMQGEEAMVVSH*AERASS
Trigger: GCTGCTTGCCCGCTCTGCTCAGTGGCTGACTACCAT...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTACGTCACCAACACTGTTaGTGGCCAGGGACCACAGCC +
Preference number: 4 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLRHQHC*WPGTTA
Trigger: GGCTGTGGTCCCTGGCCATCAACAGTGTTGGTGACG...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCTCTCAGTTCTTCCCCTaGCTCTGGCGGAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGSQFFP*LWRRDG
Trigger: ACCATCTCTCCGCCAGAGTCAGGGGAAGAACTGAGA...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGACTCTTTGCAGGCATaGAGCTCCGGTCCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: LAPKSPQACKGAMQGEEADSLQA*SSGPVP
Trigger: GGGAACGGGACCGGAGCTTCATGCCTGCAAAGAGTC...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR GCA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGAGCAGGTTCAGTCCCTaGAGGGCAGCGGGTACAGTC +
Preference number: 4 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQSRFSP*RAAGTV
Trigger: GACTGTACCCGCTGCCCTGCAGGGACTGAACCTGCT...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGCAGCAGGACAAGAGGTaGAGGAGGAGCCCACATCAG +
Preference number: 4 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVQQDKR*RRSPHQ
Trigger: CTGATGTGGGCTCCTCCTGCACCTCTTGTCCTGCTG...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGGGCGCAGCTGTCAGCTaGTGGCAGGTCACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: AGCWHPNRRRLAKVLCKVGAAVS*WQVTVL
Trigger: AAGGACTGTGACCTGCCAGCAGCTGACAGCTGCGCC...CACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp AAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGCCACAGCCGGGGTATaGGCCTCTCAGTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KSPQACKGAMQGEEAGEAATAGV*ASQFFP
Trigger: GGGGAAGAACTGAGAGGCGCATACCCCGGCTGTGGC...TGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGCAAACCGAATGCCTGTaGCGAGGGAGTAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQQTECL*RGSSGP
Trigger: AGGGCCGCTACTCCCTCGGCACAGGCATTCGGTTTG...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTCCACCTGGAGTCATCTaGATTGGGCTGGCACTGGTC +
Preference number: 4 (lower is better)
Translates to: PQACKGAMQGEEAGEAGSPPGVI*IGLALV
Trigger: GACCAGTGCCAGCCCAATGCAGATGACTCCAGGTGG...ACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCACAGGAGAAGGCTCTTTaGAGGCATGAAGCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: RRRLAKVLCKVRRQVRQAQEKAL*RHEAPV
Trigger: GACCGGAGCTTCATGCCTGCAAAGAGCCTTCTCCTG...TGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp CGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGGTTTTGAAGAAGCCTaGGTTGCAGGGTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RRRLAKVLCKVRRQVRQAGFEEA*VAGWAV
Trigger: CACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACC...TGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGGTAGCCTGTCACCTCTaGGGGGATGATGACTGCCTG +
Preference number: 4 (lower is better)
Translates to: QQWVLQDAGTQIAAGLQRVACHL*GDDDCL
Trigger: CAGGCAGTCATCATCCCCCCAGAGGTGACAGGCTAC...CCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp CCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGCAGCTGTCAGCTGCTaGCAGGTCACAGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: PQACKGAMQGEEAGEAGSAAVSC*QVTVLE
Trigger: CTCAAGGACTGTGACCTGCCAGCAGCTGACAGCTGC...ACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTGGTGTTGCAGGATGCTaGCACCCAAATCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SGCCRMLAPKSPQACKGAGVAGC*HPNRRR
Trigger: CCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTAGGTGTTGCAGGATGCTaGCACCCAAATCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLGVAGC*HPNRRR
Trigger: CCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GATGAGGTCGTCCTCTACATCCTCGCCTTCCATGATGGCGCAGCTGTCAGCTGCACTCTGGCGGAGAGATaGTGGCTGTGCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: DEVVLYILAFHDGAAVSCTLAER*WLCPGS
Trigger: TGAGCCTGGGCACAGCCACCATCTCTCCGCCAGAGT...GCAGCTGACAGCTGCGCCATCATGGAAGGCGAGGATGTAGAGGACGACCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp ATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCGTTCCCTGGGTCACCTaGAAGGCGGTCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: MKRFPAVGVAGCWHPNRRVPWVT*KAVPAQ
Trigger: CTGGGCTGGGACCGCCTTCCAGGTGACCCAGGGAAC...GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
3UTR CAA 72 bp CCATATGGGCAGGGCTGGCAGGTGCTGTTGTTGGTTTaGAAGAAGCCTGGGTTGCAGGGTGGGCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: PYGQGWQVLLLV*KKPGLQGGQWV
Trigger: GACCCACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACCAACAACAGCACCTGCCAGCCCTGCCCATATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCGGTCGGAGTGTTGCGTaGGAAGGTGCAATCGTTGTA +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGGRSVA*EGAIVV
Trigger: TACAACGATTGCACCTTCTCACGCAACACTCCGACC...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGCCCTCCAGCAAGAGTaGCAGTGTTTGCCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: APKSPQACKGAMQGEEAGALQQE*QCLPKR
Trigger: CCGCTTTGGCAAACACTGTCACTCTTGCTGGAGGGC...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGGCCCTCCAGCAAGAGTaGCAGTGTTTGCCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRALQQE*QCLPKR
Trigger: CCGCTTTGGCAAACACTGTCACTCTTGCTGGAGGGC...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp CGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAAGATTTGGAGAACCCTaGCTCACCCTCAGGAATCCG +
Preference number: 4 (lower is better)
Translates to: RRRLAKVLCKVRRQVRQARFGEP*LTLRNP
Trigger: CGGATTCCTGAGGGTGAGTCAGGGTTCTCCAAATCT...TGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGAAGGCTGACAGGCTGTaGGGAAACCCCGGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: GCCRMLAPKSPQACKGAMKADRL*GNPGLV
Trigger: TACAAGGCCGGGGTTTCCTCACAGCCTGTCAGCCTT...CATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTAAGGCTGACAGGCTGTaGGGAAACCCCGGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: SGCCRMLAPKSPQACKGAKADRL*GNPGLV
Trigger: TACAAGGCCGGGGTTTCCTCACAGCCTGTCAGCCTT...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGTCGATCAGCAAGGCTaGCAGGCTGTGAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: APKSPQACKGAMQGEEAGVDQQG*QAVRKP
Trigger: GGGTTTCCTCACAGCCTGTCAGCCTTGCTGATCGAC...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTGACGCGGATGGTGGTTaGTCTCCCAGAACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SGCCRMLAPKSPQACKGADADGG*SPRTAG
Trigger: TCCTGCAGTTCTGGGAGATCAACCACCATCCGCGTC...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCTGGTTTTGCAGATGGTaGCTCTCTGCTCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGWFCRW*LSAQAE
Trigger: CTCTGCCTGAGCAGAGAGTCACCATCTGCAAAACCA...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGAGCAGGTCAAGACGGTaGGCAGGATGGCAGTACAGG +
Preference number: 4 (lower is better)
Translates to: CWHPNRRRLAKVLCKVRRSRSRR*AGWQYR
Trigger: CCTGTACTGCCATCCTGCTCACCGTCTTGACCTGCT...CCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTAGCAGGTCAAGACGGTaGGCAGGATGGCAGTACAGG +
Preference number: 4 (lower is better)
Translates to: SGCCRMLAPKSPQACKGASRSRR*AGWQYR
Trigger: CCTGTACTGCCATCCTGCTCACCGTCTTGACCTGCT...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCACATCCTCGCCTTCCATaGTGGCGCAGCTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VLQDAGTQIAAGLQRCYAHPRLP*WRSCQL
Trigger: CAGCTGACAGCTGCGCCATCATGGAAGGCGAGGATG...TGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATCATCCTCGCCTTCCATaGTGGCGCAGCTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: WVLQDAGTQIAAGLQRCYHPRLP*WRSCQL
Trigger: CAGCTGACAGCTGCGCCATCATGGAAGGCGAGGATG...ATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGCTCTTTGCAGGCATaGAGCTCCGGTCCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQGSLQA*SSGPVP
Trigger: GGGAACGGGACCGGAGCTTCATGCCTGCAAAGAGCC...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp GGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGCTCTGCCATCACCGACTaGGGAGGTCTAAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: GSASHRSMSRPPEDVFSGSAITD*GGLNPG
Trigger: GCCAGGATTTAGACCTCCGCAGTCGGTGATGGCAGA...GCCGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCCAGCAGGACAAGAGGTaGAGGAGGAGCCCACATCAG +
Preference number: 4 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCQQDKR*RRSPHQ
Trigger: CTGATGTGGGCTCCTCCTGCACCTCTTGTCCTGCTG...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCGCTCAGGCAGAGAAATaGCACCAGAGCATAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGAQAEK*HQSIAW
Trigger: CCAAGCTATGCTCTGGTGGCATTTCTCTGCCTGAGC...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAGGCGCAGCTGTCAGCTaGTGGCAGGTCACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: VLQDAGTQIAAGLQRCYAGAAVS*WQVTVL
Trigger: AAGGACTGTGACCTGCCAGCAGCTGACAGCTGCGCC...TGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGTGGGTGTTGCAGGATaGTGGCACCCAAATCGCCGC +
Preference number: 4 (lower is better)
Translates to: RMLAPKSPQACKGAMQGEVGVAG*WHPNRR
Trigger: GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp TGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGTCCACCTGGAACCCGTaGTGTCACACGCCGTGTACT +
Preference number: 4 (lower is better)
Translates to: CWHPNRRRLAKVLCKVRRSTWNP*CHTPCT
Trigger: AGTACACGGCGTGTGACAGCACGGGTTCCAGGTGGA...CCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR GCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGAAACTCCCCGGCGTTaGAGGAGAAGGAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEEETPRR*RRRSTR
Trigger: CCGAGTGCTCCTTCTCCTGCAACGCCGGGGAGTTTC...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR GCA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAAACTCCCCGGCGTTaGAGGAGAAGGAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: RMLAPKSPQACKGAMQGEETPRR*RRRSTR
Trigger: CCGAGTGCTCCTTCTCCTGCAACGCCGGGGAGTTTC...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR GCA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGCCACCTGGAGTCATCTaGATTGGGCTGGCACTGGTC +
Preference number: 4 (lower is better)
Translates to: PKSPQACKGAMQGEEAGEPPGVI*IGLALV
Trigger: GACCAGTGCCAGCCCAATGCAGATGACTCCAGGTGG...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGGAGCCCTGCTTGTCTaGATACGTGCCAGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: PQACKGAMQGEEAGEAGSGALLV*IRARFA
Trigger: TGCAAACCTGGCACGTATGCAGACAAGCAGGGCTCC...ACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp CGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCATTGCCTCATGAAAAGTaGTCCTCTGGAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RRRLAKVLCKVRRQVRQALPHEK*SSGRPR
Trigger: CCTGGGCCTTCCAGAGGACCACTTTTCATGAGGCAA...TGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp ATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCGTTGTTCTTGGTCCCTaGACCACAGGGCACACAGGC +
Preference number: 4 (lower is better)
Translates to: ISSSGCCRMLAPKSPQACVVLGP*TTGHTG
Trigger: GCCTGTGTGCCCTGTGGTCCAGGGACCAAGAACAAC...GCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGGTAGCCTGTCACCTCTaGGGGGATGATGACTGCCTG +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRVACHL*GDDDCL
Trigger: CAGGCAGTCATCATCCCCCCAGAGGTGACAGGCTAC...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTAGCAGCTGTCAGCTGCTaGCAGGTCACAGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLAAVSC*QVTVLE
Trigger: CTCAAGGACTGTGACCTGCCAGCAGCTGACAGCTGC...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGGTGTTGCAGGATGCTaGCACCCAAATCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEEGVAGC*HPNRRR
Trigger: CCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGACTCTGGCGGAGAGATaGTGGCTGTGCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: VAGCWHPNRRRLAKVLCKTLAER*WLCPGS
Trigger: TGAGCCTGGGCACAGCCACCATCTCTCCGCCAGAGT...CTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGAGGCTGGCAAAGCCATaGGGCAGCTCATCCCACTCA +
Preference number: 4 (lower is better)
Translates to: CWHPNRRRLAKVLCKVRRRLAKP*GSSSHS
Trigger: TGAGTGGGATGAGCTGCCCCATGGCTTTGCCAGCCT...CCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGTGTTGGCTGAGAGGCTaGCAAAGCCATGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQCWLRG*QSHGAA
Trigger: AGCTGCCCCATGGCTTTGCCAGCCTCTCAGCCAACA...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTTGTTGGCTGAGAGGCTaGCAAAGCCATGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: APKSPQACKGAMQGEEAGCWLRG*QSHGAA
Trigger: AGCTGCCCCATGGCTTTGCCAGCCTCTCAGCCAACA...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGTGCATTCGTCCGTGTTaGAGGCGATGTAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRCIRPC*RRCSRP
Trigger: GGGGCGACTACATCGCCTCCAACACGGACGAATGCA...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGTTGTGTCTCTCCGTTaGCATCGCAGGCCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: APKSPQACKGAMQGEEAGVVSLR*HRRPCV
Trigger: CACACACGGCCTGCGATGCCAACGGAGAGACACAAC...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGTTGTGTCTCTCCGTTaGCATCGCAGGCCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQVVSLR*HRRPCV
Trigger: CACACACGGCCTGCGATGCCAACGGAGAGACACAAC...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR TCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCTTCCTGCTTGCCTCATaGAAAGTGGTCCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGFLLAS*KVVLWK
Trigger: CTTCCAGAGGACCACTTTTCATGAGGCAAGCAGGAA...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GGCTGTGCATTCGTCCGTGTTGGAGGCGATGTAGTCGCCCCGGGGAACCCACTTCGGAGAAGTTGTAGTTaGAAGTCCTGGTCGGAGTGT +
Preference number: 4 (lower is better)
Translates to: GCAFVRVGGDVVAPGNPLRRSCS*KSWSEC
Trigger: ACACTCCGACCAGGACTTTCAACTACAACTTCTCCG...AAGTGGGTTCCCCGGGGCGACTACATCGCCTCCAACACGGACGAATGCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp ATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCTCAGCCCTTTGGAAGTaGAGCTTGGCCCTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ISSSGCCRMLAPKSPQACSALWK*SLALQQ
Trigger: TTGCTGGAGGGCCAAGCTTCACTTCCAAAGGGCTGA...GCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR TCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGGAATCCGGAGGTCAGTaGCATTGTCGGTGCACACAG +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRESGGQ*HCRCTQ
Trigger: CTGTGTGCACCGACAATGTCACTGACCTCCGGATTC...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGACGCGGATGGTGGTTaGTCTCCCAGAACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RMLAPKSPQACKGAMQGEDADGG*SPRTAG
Trigger: TCCTGCAGTTCTGGGAGATCAACCACCATCCGCGTC...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCGATGGGAGGATAGCTTaGGCCCAAGAGCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCDGRIA*AQELEA
Trigger: AGCCTCAAGCTCTTGGGCTCAAGCTATCCTCCCATC...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGCGGACAGATCACTTaGGCCCAGGAGTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQGGQIT*AQELET
Trigger: GGTCTCCAACTCCTGGGCTCAAGTGATCTGTCCGCC...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCGGTGGGTGGATCACTTaGGTCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCGGWIT*VQEFET
Trigger: GGTCTCAAACTCCTGGACTCAAGTGATCCACCCACC...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GGTGCCCAAGTATTGCTGAGGCTACAGAAGACTTTAGGCTGGAGCTCAGGAGCTGCCATAGCGTTGTCCTaGGTGAGCGGCAGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: GAQVLLRLQKTLGWSSGAAIALS*VSGSSG
Trigger: GCCGCTACTGCCGCTCACTCAGGACAACGCTATGGC...AGCTCCTGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACTTGGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGTCTCAGTTCTTCCCCTaGCTCTGGCGGAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: AGCWHPNRRRLAKVLCKVSQFFP*LWRRDG
Trigger: ACCATCTCTCCGCCAGAGTCAGGGGAAGAACTGAGA...CACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GGTGCTGTTGTTGGTTTTGAAGAAGCCTGGGTTGCAGGGTGGGCAGTGGGTCTTAGCAGGTTCAGTCCCTaGAGGGCAGCGGGTACAGTC +
Preference number: 4 (lower is better)
Translates to: GAVVGFEEAWVAGWAVGLSRFSP*RAAGTV
Trigger: GACTGTACCCGCTGCCCTGCAGGGACTGAACCTGCT...AAGACCCACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACCAACAACAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTTCTGCCATCACCGACTaGGGAGGTCTAAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGCCRMLAPKSPQACKGASAITD*GGLNPG
Trigger: GCCAGGATTTAGACCTCCGCAGTCGGTGATGGCAGA...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGTCCTGGTCGGAGTGTTaGGTGAGAAGGTGCAATCGT +
Preference number: 4 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVSWSEC*VRRCNR
Trigger: ACGATTGCACCTTCTCACGCAACACTCCGACCAGGA...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGGGATGGCAGTACAGGTaGCTGCAGAGATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: HPNRRRLAKVLCKVRRQVGWQYR*LQRCPL
Trigger: AAGTGGGCATCTCTGCAGGCACCTGTACTGCCATCC...CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CACCTCCCAGCCTGTCATGCCCTTGTACTCGAAGTTGATCCCACTGAGAACGGTGGCGCAGCTGTCAGCTaGTGGCAGGTCACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: HLPACHALVLEVDPTENGGAAVS*WQVTVL
Trigger: AAGGACTGTGACCTGCCAGCAGCTGACAGCTGCGCC...ACCGTTCTCAGTGGGATCAACTTCGAGTACAAGGGCATGACAGGCTGGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp CACCTCCCAGCCTGTCATGCCCTTGTACTCGAAGTTGATCCCACTGAGAACGGTGTGGGTGTTGCAGGATaGTGGCACCCAAATCGCCGC +
Preference number: 4 (lower is better)
Translates to: HLPACHALVLEVDPTENGVGVAG*WHPNRR
Trigger: GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC...ACCGTTCTCAGTGGGATCAACTTCGAGTACAAGGGCATGACAGGCTGGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGTCCAGCAGTGGGTGTTaGAGGATGCTGGCACCCAAA +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRSSSGC*RMLAPK
Trigger: TTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGA...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
CDS-3UTR GCA 90 bp CCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGTCCAGCAGTGGGTGTTaGAGGATGCTGGCACCCAAA +
Preference number: 4 (lower is better)
Translates to: PNRRRLAKVLCKVRRQVRSSSGC*RMLAPK
Trigger: TTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGA...CCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
CDS-3UTR GCA 90 bp CAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGAGGCCTTGCTCCCCTTaGCCTCAGACTACCATTTTC +
Preference number: 4 (lower is better)
Translates to: QQWVLQDAGTQIAAGLQRRPCSP*PQTTIF
Trigger: GAAAATGGTAGTCTGAGGGCAAGGGGAGCAAGGCCT...CCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp GGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAGGAGCTGCGTATCTaGATCCACACTGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GCCRMLAPKSPQACKGAMQELRI*IHTGGS
Trigger: ACTTCCCCCAGTGTGGATGCAGATACGCAGCTCCTG...CATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGCTGGAGCTCAGGAGCTaGGTATCTGCATCCACACTG +
Preference number: 4 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQLELRS*VSASTL
Trigger: CAGTGTGGATGCAGATACGCAGCTCCTGAGCTCCAG...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTAGTCACAGGGCAGACCTaGAGAAGTCAGCACGGTAAG +
Preference number: 4 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLVTGQT*RSQHGK
Trigger: CTTACCGTGCTGACTTCTGCAGGTCTGCCCTGTGAC...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp TGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCCAAGATCATGGCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: CWHPNRRRLAKVLCKVRRPRSWH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGCCATGATCTTGG...CCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp GTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCACCAGGATGGGGAGGCTaGAGTGAGCCAAGATCATGG +
Preference number: 4 (lower is better)
Translates to: VLQDAGTQIAAGLQRCYAPGWGG*SEPRSW
Trigger: CCATGATCTTGGCTCACTGCAGCCTCCCCATCCTGG...TGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGTCCACCTGGAACCCGTaGTGTCACACGCCGTGTACT +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEESTWNP*CHTPCT
Trigger: AGTACACGGCGTGTGACAGCACGGGTTCCAGGTGGA...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR GCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAACAAACCGAATGCCTGTaGCGAGGGAGTAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQQTECL*RGSSGP
Trigger: AGGGCCGCTACTCCCTCGGCACAGGCATTCGGTTTG...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGACATCAGTGTGGCTGTaGATTCGTCCGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QQWVLQDAGTQIAAGLQRTSVWL*IRPCWR
Trigger: CCTCCAACACGGACGAATGCACAGCCACACTGATGT...CCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR GCA 90 bp GGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGGCTTGTCTGCATACGTaGCAGGTTTGCAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GCCRMLAPKSPQACKGAMACLHT*QVCRGS
Trigger: GCTTCCCCTGCAAACCTGGCACGTATGCAGACAAGC...CATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR GCA 90 bp TGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGGGAGCCCTGCTTGTCTaGATACGTGCCAGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: CWHPNRRRLAKVLCKVRRGALLV*IRARFA
Trigger: TGCAAACCTGGCACGTATGCAGACAAGCAGGGCTCC...CCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp AATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGGCCTGGGTTGCAGGGTaGGCAGTGGGTCTTCACACC +
Preference number: 4 (lower is better)
Translates to: NEEISSSGCCRMLAPKSPAWVAG*AVGLHT
Trigger: GGTGTGAAGACCCACTGCCCACCCTGCAACCCAGGC...CGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp GGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCCATATGGGCAGGGCTaGCAGGTGCTGTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: GCCRMLAPKSPQACKGAMPYGQG*QVLLLV
Trigger: AACCAACAACAGCACCTGCCAGCCCTGCCCATATGG...CATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGCCATATGGGCAGGGCTaGCAGGTGCTGTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: PKSPQACKGAMQGEEAGEPYGQG*QVLLLV
Trigger: AACCAACAACAGCACCTGCCAGCCCTGCCCATATGG...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp AAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGAGTAGGAACCATATaGGCAGGGCTGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: KSPQACKGAMQGEEAGEAGVGTI*AGLAGA
Trigger: AGCACCTGCCAGCCCTGCCCATATGGTTCCTACTCC...TGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGTTGCCTCATGAAAAGTaGTCCTCTGGAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVLPHEK*SSGRPR
Trigger: CCTGGGCCTTCCAGAGGACCACTTTTCATGAGGCAA...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGTTAGTGGGGCAGGAGTaGCAGGTTCCTGAATCTCGG +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRLVGQE*QVPESR
Trigger: CCGAGATTCAGGAACCTGCCACTCCTGCCCCACTAA...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTTTAGTGGGGCAGGAGTaGCAGGTTCCTGAATCTCGG +
Preference number: 4 (lower is better)
Translates to: APKSPQACKGAMQGEEAGLVGQE*QVPESR
Trigger: CCGAGATTCAGGAACCTGCCACTCCTGCCCCACTAA...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCAGCTTCACTGCCCCCTCAAGGTCCTCGCTACAGATTTTCGGCTTGGCCCATTGTTGTTCTTGGTCCCTaGACCACAGGGCACACAGGC +
Preference number: 4 (lower is better)
Translates to: AASLPPQGPRYRFSAWPIVVLGP*TTGHTG
Trigger: GCCTGTGTGCCCTGTGGTCCAGGGACCAAGAACAAC...AATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGAGGGGGCAGTGAAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp GTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAGTTGTTCTTGGTCCCTaGACCACAGGGCACACAGGC +
Preference number: 4 (lower is better)
Translates to: VLQDAGTQIAAGLQRCYAVVLGP*TTGHTG
Trigger: GCCTGTGTGCCCTGTGGTCCAGGGACCAAGAACAAC...TGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGCCCAAGGACTCCAGGTaGAAAAGTTCAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PKSPQACKGAMQGEEAGEPKDSR*KSSAGE
Trigger: CTCCCCAGCTGAACTTTTCCACCTGGAGTCCTTGGG...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGATCCGAGCACGTTCCTaGCAGCAGCAAACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PNRRRLAKVLCKVRRQVRIRARS*QQQTSR
Trigger: CCTGGAAGTTTGCTGCTGCCAGGAACGTGCTCGGAT...CCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAGCTGTCAGCTGCTaGCAGGTCACAGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: WVLQDAGTQIAAGLQRCYAAVSC*QVTVLE
Trigger: CTCAAGGACTGTGACCTGCCAGCAGCTGACAGCTGC...ATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGGCAGCTGTCAGCTGCTaGCAGGTCACAGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LQDAGTQIAAGLQRCYARAAVSC*QVTVLE
Trigger: CTCAAGGACTGTGACCTGCCAGCAGCTGACAGCTGC...CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGACGAAGCTATGGCTCTaGCGGATGGGCCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: AGCWHPNRRRLAKVLCKVTKLWL*RMGHFG
Trigger: CCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGT...CACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGCAGACGAAGCTATaGCTCTGGCGGATGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RMLAPKSPQACKGAMQGEEQTKL*LWRMGH
Trigger: ATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTC...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCGGGGAAGTTCCAACATaGACACAGGTTCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCGEVPT*TQVLRA
Trigger: GGCTCTCAGAACCTGTGTCCATGTTGGAACTTCCCC...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAACTCTGGCGGAGAGATaGTGGCTGTGCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQTLAER*WLCPGS
Trigger: TGAGCCTGGGCACAGCCACCATCTCTCCGCCAGAGT...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGAGGCTGGCAAAGCCATaGGGCAGCTCATCCCACTCA +
Preference number: 4 (lower is better)
Translates to: RMLAPKSPQACKGAMQGERLAKP*GSSSHS
Trigger: TGAGTGGGATGAGCTGCCCCATGGCTTTGCCAGCCT...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCCATCCAGCTCCATGTTaGCTGAGAGGCTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCHPAPC*LRGWQS
Trigger: GCTTTGCCAGCCTCTCAGCCAACATGGAGCTGGATG...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGCATCCAGCTCCATGTTaGCTGAGAGGCTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQHPAPC*LRGWQS
Trigger: GCTTTGCCAGCCTCTCAGCCAACATGGAGCTGGATG...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGCGGCGTACATCAGTGTaGCTGTGCATTCGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: HPNRRRLAKVLCKVRRQVRRTSV*LCIRPC
Trigger: ACACGGACGAATGCACAGCCACACTGATGTACGCCG...CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCTTTGTCTGTGCAAGCTaGGCGCACGTTACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGFVCAS*AHVTGR
Trigger: TCTTCCTGTAACGTGCGCCCAGCTTGCACAGACAAA...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp TGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATCAGCTCCCAAAGGACTaGACCCAGACACCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: WVLQDAGTQIAAGLQRCYQLPKD*TQTPWR
Trigger: CCTCCAAGGTGTCTGGGTCCAGTCCTTTGGGAGCTG...ATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527501.1
CDS-3UTR TCA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGCATGAAGTCATTGTCTaGGGCTCCAGCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVHEVIV*GSSSCV
Trigger: TACACAGCTGCTGGAGCCTCAGACAATGACTTCATG...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGCTTCCTGCTTGCCTCATaGAAAGTGGTCCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GSASHRSMSRPPEDVFSGFLLAS*KVVLWK
Trigger: CTTCCAGAGGACCACTTTTCATGAGGCAAGCAGGAA...GCCGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCCGGAGAAGTTGTAGTTaGAAGTCCTGGTCGGAGTGT +
Preference number: 4 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCRRSCS*KSWSEC
Trigger: ACACTCCGACCAGGACTTTCAACTACAACTTCTCCG...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGTCAGCCCTTTGGAAGTaGAGCTTGGCCCTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEESALWK*SLALQQ
Trigger: TTGCTGGAGGGCCAAGCTTCACTTCCAAAGGGCTGA...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp AAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGAATCCGGAGGTCAGTaGCATTGTCGGTGCACACAG +
Preference number: 4 (lower is better)
Translates to: KSPQACKGAMQGEEAGEAESGGQ*HCRCTQ
Trigger: CTGTGTGCACCGACAATGTCACTGACCTCCGGATTC...TGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGGAATCCGGAGGTCAGTaGCATTGTCGGTGCACACAG +
Preference number: 4 (lower is better)
Translates to: LQDAGTQIAAGLQRCYARESGGQ*HCRCTQ
Trigger: CTGTGTGCACCGACAATGTCACTGACCTCCGGATTC...CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAAAGGCTGACAGGCTGTaGGGAAACCCCGGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQKADRL*GNPGLV
Trigger: TACAAGGCCGGGGTTTCCTCACAGCCTGTCAGCCTT...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp CACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGTGGTTTTGCAGATGGTaGCTCTCTGCTCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HPNRRRLAKVLCKVRRQVWFCRW*LSAQAE
Trigger: CTCTGCCTGAGCAGAGAGTCACCATCTGCAAAACCA...CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GGTGCCCAAGTATTGCTGAGGCTACAGAAGACTTTAGGCTGGAGCTCAGGAGCTCATCCTCGCCTTCCATaGTGGCGCAGCTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GAQVLLRLQKTLGWSSGAHPRLP*WRSCQL
Trigger: CAGCTGACAGCTGCGCCATCATGGAAGGCGAGGATG...AGCTCCTGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACTTGGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp AATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCATCCTCGCCTTCCATaGTGGCGCAGCTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: NEEISSSGCCRMLAPKSPHPRLP*WRSCQL
Trigger: CAGCTGACAGCTGCGCCATCATGGAAGGCGAGGATG...CGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
CDS-3UTR TCA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTGTCTTCAGCGGCACTaGGTCAAATCCATCAGGAGT +
Preference number: 4 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCCLQRH*VKSIRS
Trigger: ACTCCTGATGGATTTGACTCAGTGCCGCTGAAGACA...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCCTGATAAGGCCACAATaGAGAGATTTCCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGLIRPQ*RDFQQW
Trigger: CCACTGCTGGAAATCTCTTCATTGTGGCCTTATCAG...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR TCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGCTCCTGAAGAGATCATaGGCTGAGGGCATGCGAGGA +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEELLKRS*AEGMRG
Trigger: TCCTCGCATGCCCTCAGCTCATGATCTCTTCAGGAG...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp CCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGTAGTCCTAGCTACTTaGGAGGTTGAGATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PQACKGAMQGEEAGEAGSVVLAT*EVEMGG
Trigger: TCCTCCCATCTCAACCTCTCAAGTAGCTAGGACTAC...ACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGCAGGTTCTGAGAGCCTaGCTCCTACAAAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RMLAPKSPQACKGAMQGEQVLRA*LLQKEG
Trigger: CCCCTCCTTTTGTAGGAGTCAGGCTCTCAGAACCTG...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp ATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCGCAGGGGAAGCATTCTaGAGTGTAGGCCACCCCTGT +
Preference number: 4 (lower is better)
Translates to: MKRFPAVGVAGCWHPNRRAGEAF*SVGHPC
Trigger: ACAGGGGTGGCCTACACTTCAGAATGCTTCCCCTGC...GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR GCA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTTCTGCCATCACCGACTaGGGAGGTCTAAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGSAITD*GGLNPG
Trigger: GCCAGGATTTAGACCTCCGCAGTCGGTGATGGCAGA...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTTTATTCTCTGTGTCTaGCATCACCGACTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCFILCV*HHRLRR
Trigger: CCTCCGCAGTCGGTGATGGCAGACACAGAGAATAAA...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAACAGCAGGACAAGAGGTaGAGGAGGAGCCCACATCAG +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQQQDKR*RRSPHQ
Trigger: CTGATGTGGGCTCCTCCTGCACCTCTTGTCCTGCTG...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGTCCTGGTCGGAGTGTTaGGTGAGAAGGTGCAATCGT +
Preference number: 4 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQSWSEC*VRRCNR
Trigger: ACGATTGCACCTTCTCACGCAACACTCCGACCAGGA...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTTCCTGGTCGGAGTGTTaGGTGAGAAGGTGCAATCGT +
Preference number: 4 (lower is better)
Translates to: SGCCRMLAPKSPQACKGASWSEC*VRRCNR
Trigger: ACGATTGCACCTTCTCACGCAACACTCCGACCAGGA...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGCAGCTCAGGCAGAGAAATaGCACCAGAGCATAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AVPLTGPCLGLLRMSSAAAQAEK*HQSIAW
Trigger: CCAAGCTATGCTCTGGTGGCATTTCTCTGCCTGAGC...TGCCGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp TTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGGGATGGCAGTACAGGTaGCTGCAGAGATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: LQDAGTQIAAGLQRCYARGWQYR*LQRCPL
Trigger: AAGTGGGCATCTCTGCAGGCACCTGTACTGCCATCC...CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGCACTTGCAAAGGTGCTATaGAAGGTGAGGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AVPLTGPCLGLLRMSSAALAKVL*KVRRQV
Trigger: CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAG...TGCCGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527501.1
ENST00000527996.5
CDS-3UTR GCA 90 bp CAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGCTCAAGCCACCATTCTaGCTTGGGATTACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: QQWVLQDAGTQIAAGLQRLKPPF*LGITGV
Trigger: CACACCTGTAATCCCAAGGCAGAATGGTGGCTTGAG...CCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTACTCATCAAACCGAATaGCTGTGCCGAGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: APKSPQACKGAMQGEEAGTHQTE*LCRGSS
Trigger: GCTACTCCCTCGGCACAGGCATTCGGTTTGATGAGT...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGACTCATCAAACCGAATaGCTGTGCCGAGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PKSPQACKGAMQGEEAGETHQTE*LCRGSS
Trigger: GCTACTCCCTCGGCACAGGCATTCGGTTTGATGAGT...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAACATCAGTGTGGCTGTaGATTCGTCCGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LAPKSPQACKGAMQGEEATSVWL*IRPCWR
Trigger: CCTCCAACACGGACGAATGCACAGCCACACTGATGT...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGCATACGTGCCAGGTTTaGAGGGGAAGCATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: QQWVLQDAGTQIAAGLQRHTCQV*RGSILK
Trigger: CTTCAGAATGCTTCCCCTGCAAACCTGGCACGTATG...CCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR GCA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGCAGAAAGAGGAGCCCTaGTTGTCTGCATACGTGCCA +
Preference number: 4 (lower is better)
Translates to: PKSPQACKGAMQGEEAGEQKEEP*LSAYVP
Trigger: TGGCACGTATGCAGACAAGCAGGGCTCCTCTTTCTG...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp CGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCACGGAGGTCTAAATCCTaGCACAACCAGAGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: RRRLAKVLCKVRRQVRQARRSKS*HNQSEN
Trigger: ATTCTCACTCTGGTTGTGCCAGGATTTAGACCTCCG...TGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCTTGCCTCATGAAAAGTaGTCCTCTGGAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCLPHEK*SSGRPR
Trigger: CCTGGGCCTTCCAGAGGACCACTTTTCATGAGGCAA...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGGATCTTGTTGTTCTTaGTCCCTGGACCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: APKSPQACKGAMQGEEAGGSCCS*SLDHRA
Trigger: TGCCCTGTGGTCCAGGGACCAAGAACAACAAGATCC...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGGATCTTGTTGTTCTTaGTCCCTGGACCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PKSPQACKGAMQGEEAGEGSCCS*SLDHRA
Trigger: TGCCCTGTGGTCCAGGGACCAAGAACAACAAGATCC...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCGACATTTTCCTACCCTaGTTTCCACAGAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGDIFLP*FPQRLR
Trigger: CCTCAGTCTCTGTGGAAACCAGGGTAGGAAAATGTC...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGGTGGAAAAGTTCAGCTaGGGAGGTGATTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVVEKFS*GGDSIQ
Trigger: CTGGATGGAATCACCTCCCCAGCTGAACTTTTCCAC...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGCCCAAGGACTCCAGGTaGAAAAGTTCAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEEPKDSR*KSSAGE
Trigger: CTCCCCAGCTGAACTTTTCCACCTGGAGTCCTTGGG...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATCCCAAGGACTCCAGGTaGAAAAGTTCAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WVLQDAGTQIAAGLQRCYPKDSR*KSSAGE
Trigger: CTCCCCAGCTGAACTTTTCCACCTGGAGTCCTTGGG...ATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CAGGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGAGGGACAGTTTTCTGTaGACTGCACCTGACGCGGAT +
Preference number: 4 (lower is better)
Translates to: QAVPLTGPCLGLLRMSSARDSFL*TAPDAD
Trigger: ATCCGCGTCAGGTGCAGTCCACAGAAAACTGTCCCT...CGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp GCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGCACACCAGAGCATAGCTTaGGTTCTCGCCACACGTAAG +
Preference number: 4 (lower is better)
Translates to: AVPLTGPCLGLLRMSSAAHQSIA*VLATRK
Trigger: CTTACGTGTGGCGAGAACCCAAGCTATGCTCTGGTG...TGCCGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp CCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCACCAGAGCATAGCTTaGGTTCTCGCCACACGTAAG +
Preference number: 4 (lower is better)
Translates to: PNRRRLAKVLCKVRRQVRHQSIA*VLATRK
Trigger: CTTACGTGTGGCGAGAACCCAAGCTATGCTCTGGTG...CCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp AGGATGTCTTCAGCGGCACTGAGTCAAATCCATCAGGAGTCCTCCACCCACACAGGTGTTGCAGGATGCTaGCACCCAAATCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RMSSAALSQIHQESSTHTGVAGC*HPNRRR
Trigger: CCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC...TGTGTGGGTGGAGGACTCCTGATGGATTTGACTCAGTGCCGCTGAAGACATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527501.1
CDS-3UTR CCA 90 bp CGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTTATCCAGGGGAAATaGATCCAGGCTGCTATGAAG +
Preference number: 4 (lower is better)
Translates to: RRRLAKVLCKVRRQVRQAVIQGK*IQAAMK
Trigger: CTTCATAGCAGCCTGGATCCATTTCCCCTGGATAAC...TGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp CCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTTCACCAAATGGTCACTaGAGAAAGGGCACAGGCACA +
Preference number: 4 (lower is better)
Translates to: PQACKGAMQGEEAGEAGSSPNGH*RKGTGT
Trigger: TGTGCCTGTGCCCTTTCTCCAGTGACCATTTGGTGA...ACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp CAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGGTGTTTGCTCTCAAGTaGGCGGACAACTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: QQWVLQDAGTQIAAGLQRVFALK*ADNSVS
Trigger: ACTCACAGAGTTGTCCGCCCACTTGAGAGCAAACAC...CCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp TGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATCATCCAGCTCCATGTTaGCTGAGAGGCTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: WVLQDAGTQIAAGLQRCYHPAPC*LRGWQS
Trigger: GCTTTGCCAGCCTCTCAGCCAACATGGAGCTGGATG...ATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGTGGTCTTCATCCACCTaGAGTCATCTGCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVWSSST*SHLHWA
Trigger: AGCCCAATGCAGATGACTCCAGGTGGATGAAGACCA...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCCAGGCTTGGGTACTTTaGTCCATACTGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCQAWVL*SILRRL
Trigger: CAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTG...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp CCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCATGAAGTCATTGTCTaGGGCTCCAGCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: PNRRRLAKVLCKVRRQVRHEVIV*GSSSCV
Trigger: TACACAGCTGCTGGAGCCTCAGACAATGACTTCATG...CCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGCATGAAGTCATTGTCTaGGGCTCCAGCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRHEVIV*GSSSCV
Trigger: TACACAGCTGCTGGAGCCTCAGACAATGACTTCATG...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGGGTCGGAGTGTTGCGTaGGAAGGTGCAATCGTTGTA +
Preference number: 4 (lower is better)
Translates to: LQDAGTQIAAGLQRCYARGRSVA*EGAIVV
Trigger: TACAACGATTGCACCTTCTCACGCAACACTCCGACC...CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGGTCGGAGTGTTGCGTaGGAAGGTGCAATCGTTGTA +
Preference number: 4 (lower is better)
Translates to: WVLQDAGTQIAAGLQRCYGRSVA*EGAIVV
Trigger: TACAACGATTGCACCTTCTCACGCAACACTCCGACC...ATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp ATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCTCAGCCCTTTGGAAGTaGAGCTTGGCCCTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: MKRFPAVGVAGCWHPNRRSALWK*SLALQQ
Trigger: TTGCTGGAGGGCCAAGCTTCACTTCCAAAGGGCTGA...GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR TCA 90 bp AAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAAGATTTGGAGAACCCTaGCTCACCCTCAGGAATCCG +
Preference number: 4 (lower is better)
Translates to: KSPQACKGAMQGEEAGEARFGEP*LTLRNP
Trigger: CGGATTCCTGAGGGTGAGTCAGGGTTCTCCAAATCT...TGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTGTTCAGCTGGGGAGGTaGTTCCATCCAGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: SGCCRMLAPKSPQACKGAVQLGR*FHPESY
Trigger: ATATGACTCTGGATGGAATCACCTCCCCAGCTGAAC...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGGTTCAGCTGGGGAGGTaGTTCCATCCAGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: CWHPNRRRLAKVLCKVRRVQLGR*FHPESY
Trigger: ATATGACTCTGGATGGAATCACCTCCCCAGCTGAAC...CCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGTGTCTTCAGCGGCACTaGGTCAAATCCATCAGGAGT +
Preference number: 4 (lower is better)
Translates to: CWHPNRRRLAKVLCKVRRCLQRH*VKSIRS
Trigger: ACTCCTGATGGATTTGACTCAGTGCCGCTGAAGACA...CCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGAAGAGATCATGAGCTaGGGGCATGCGAGGAAAACT +
Preference number: 4 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQEEIMS*GHARKT
Trigger: AGTTTTCCTCGCATGCCCTCAGCTCATGATCTCTTC...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGCATGGACACAGGTTCTaGGAGCCTGACTCCTACAAA +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRHGHRF*EPDSYK
Trigger: TTTGTAGGAGTCAGGCTCTCAGAACCTGTGTCCATG...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp CACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGCGCATGGCTTACATaGCTGGTCCTTCATATCCAG +
Preference number: 4 (lower is better)
Translates to: HPNRRRLAKVLCKVRRQVSAWLT*LVLHIQ
Trigger: CTGGATATGAAGGACCAGTCATGTAAGCCATGCGCT...CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTAGCGCATGGCTTACATaGCTGGTCCTTCATATCCAG +
Preference number: 4 (lower is better)
Translates to: SGCCRMLAPKSPQACKGASAWLT*LVLHIQ
Trigger: CTGGATATGAAGGACCAGTCATGTAAGCCATGCGCT...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAGCTCAGGCAGAGAAATaGCACCAGAGCATAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VLQDAGTQIAAGLQRCYAAQAEK*HQSIAW
Trigger: CCAAGCTATGCTCTGGTGGCATTTCTCTGCCTGAGC...TGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGCAGATGGTGACTCTCTaGTCAGGCAGAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: HPNRRRLAKVLCKVRRQVQMVTL*SGREMP
Trigger: TGGCATTTCTCTGCCTGAGCAGAGAGTCACCATCTG...CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTAGGTGCCTGCAGAGATaGCCACTTTCAGCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: APKSPQACKGAMQGEEAGRCLQR*PLSARN
Trigger: ATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCT...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGCTTGCAAAGGTGCTATaGAAGGTGAGGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEELAKVL*KVRRQV
Trigger: CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAG...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAAATCGCCGCAGGCTTaGAAAGGTGCTATGCAAGGT +
Preference number: 4 (lower is better)
Translates to: AGCWHPNRRRLAKVLCKVKSPQA*KGAMQG
Trigger: ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT...CACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCTCAGGTGCTGCGGCTaGTGCTTCTGCTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNLRCCG*CFCWQK
Trigger: CTTCTGCCAGCAGAAGCAGCAGCCGCAGCACCTGAG...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGGTACTCAGACTCTTTaGAGGCATGAAGCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGGTQTL*RHEAPV
Trigger: GACCGGAGCTTCATGCCTGCAAAGAGTCTGAGTACC...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR GCA 90 bp GTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGGTACTCAGACTCTTTaGAGGCATGAAGCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: VAGCWHPNRRRLAKVLCKGTQTL*RHEAPV
Trigger: GACCGGAGCTTCATGCCTGCAAAGAGTCTGAGTACC...CTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR GCA 90 bp TGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATACTCATCAAACCGAATaGCTGTGCCGAGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: WVLQDAGTQIAAGLQRCYTHQTE*LCRGSS
Trigger: GCTACTCCCTCGGCACAGGCATTCGGTTTGATGAGT...ATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGTTAACGGTGCCAGATTaGTTCAGGTTGACGGCGTAC +
Preference number: 4 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQLTVPD*FRLTAY
Trigger: GTACGCCGTCAACCTGAAGCAATCTGGCACCGTTAA...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGTTAACGGTGCCAGATTaGTTCAGGTTGACGGCGTAC +
Preference number: 4 (lower is better)
Translates to: AGCWHPNRRRLAKVLCKVLTVPD*FRLTAY
Trigger: GTACGCCGTCAACCTGAAGCAATCTGGCACCGTTAA...CACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GCAGCTTCACTGCCCCCTCAAGGTCCTCGCTACAGATTTTCGGCTTGGCCCATTCAGAAAGAGGAGCCCTaGTTGTCTGCATACGTGCCA +
Preference number: 4 (lower is better)
Translates to: AASLPPQGPRYRFSAWPIQKEEP*LSAYVP
Trigger: TGGCACGTATGCAGACAAGCAGGGCTCCTCTTTCTG...AATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGAGGGGGCAGTGAAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp GCTGGGGAGGTGATTCCATCCAGAGTCATATCTGTTGTCACCCCAATAAGTCGAGCCTGGGTTGCAGGGTaGGCAGTGGGTCTTCACACC +
Preference number: 4 (lower is better)
Translates to: AGEVIPSRVISVVTPISRAWVAG*AVGLHT
Trigger: GGTGTGAAGACCCACTGCCCACCCTGCAACCCAGGC...TCGACTTATTGGGGTGACAACAGATATGACTCTGGATGGAATCACCTCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGTACAGTCTGAGCCATTaGAGTAGGAACCATATGGGC +
Preference number: 4 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVYSLSH*SRNHMG
Trigger: GCCCATATGGTTCCTACTCCAATGGCTCAGACTGTA...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGGATCTTGTTGTTCTTaGTCCCTGGACCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: VAGCWHPNRRRLAKVLCKGSCCS*SLDHRA
Trigger: TGCCCTGTGGTCCAGGGACCAAGAACAACAAGATCC...CTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATTTGGAAGTGAAGCTTaGCCCTCCAGCAAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLFGSEA*PSSKSD
Trigger: GTCACTCTTGCTGGAGGGCCAAGCTTCACTTCCAAA...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCATTTGGAAGTGAAGCTTaGCCCTCCAGCAAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: LAPKSPQACKGAMQGEEAFGSEA*PSSKSD
Trigger: GTCACTCTTGCTGGAGGGCCAAGCTTCACTTCCAAA...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGGACAGTTTTCTGTaGACTGCACCTGACGCGGAT +
Preference number: 4 (lower is better)
Translates to: VLQDAGTQIAAGLQRCYARDSFL*TAPDAD
Trigger: ATCCGCGTCAGGTGCAGTCCACAGAAAACTGTCCCT...TGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGAGGGACAGTTTTCTGTaGACTGCACCTGACGCGGAT +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEERDSFL*TAPDAD
Trigger: ATCCGCGTCAGGTGCAGTCCACAGAAAACTGTCCCT...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGAGAGATTTCCAGCAGTaGGTGTTGCAGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: LQDAGTQIAAGLQRCYARRDFQQ*VLQDAG
Trigger: GCCAGCATCCTGCAACACCCACTGCTGGAAATCTCT...CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
CDS-3UTR CCA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGCTTGAGAGGTTGAGATaGGAGGATAGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQLERLR*EDSLSP
Trigger: TGGGCTCAAGCTATCCTCCCATCTCAACCTCTCAAG...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCTGGAACATCTGGGTTTaGGGCTTACCTGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGWNIWV*GLPGSF
Trigger: AAAAGAACCAGGTAAGCCCCAAACCCAGATGTTCCA...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGGGGGCACTCAAGGATaGGGAATTTTCCTCACTGAC +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEEGGTQG*GIFLTD
Trigger: GTCAGTGAGGAAAATTCCCCATCCTTGAGTGCCCCC...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp TGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATAGGCCCATGCCATTGTaGGCTGTATCCCCTAAAGTG +
Preference number: 4 (lower is better)
Translates to: WVLQDAGTQIAAGLQRCYRPMPL*AVSPKV
Trigger: CACTTTAGGGGATACAGCCCACAATGGCATGGGCCT...ATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGCAAATCATGGGCAATTaGGGCTTGACCAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQQIMGN*GLTKGR
Trigger: CCTTCCCTTGGTCAAGCCCCAATTGCCCATGATTTG...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTCATCTGGTCACCAAATaGTCACTGGAGAAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: APKSPQACKGAMQGEEAGHLVTK*SLEKGH
Trigger: GTGCCCTTTCTCCAGTGACCATTTGGTGACCAGATG...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp TTTGCCTTTGGAACCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACTCCGGTCCCGTTCCCTaGGTCACCTGGAAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: FAFGTFPRLHRSVGPRIHSGPVP*VTWKAV
Trigger: GACCGCCTTCCAGGTGACCCAGGGAACGGGACCGGA...GTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGGTTCCAAAGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp AGAGACCCCTGTTCCATAATATGGCCCAAACTTCTAGGACGGGGGCACTCAAGGTGTTGGCTGAGAGGCTaGCAAAGCCATGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RDPCSIIWPKLLGRGHSRCWLRG*QSHGAA
Trigger: AGCTGCCCCATGGCTTTGCCAGCCTCTCAGCCAACA...CCTTGAGTGCCCCCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGGGTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp GCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAAGTACAGTTCCCGGTaGACTCAGCAGCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: AGCWHPNRRRLAKVLCKVKYSSR*TQQHCH
Trigger: ATGACAGTGCTGCTGAGTCCACCGGGAACTGTACTT...CACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAAGTACAGTTCCCGGTaGACTCAGCAGCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRKYSSR*TQQHCH
Trigger: ATGACAGTGCTGCTGAGTCCACCGGGAACTGTACTT...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp AGAGACCCCTGTTCCATAATATGGCCCAAACTTCTAGGACGGGGGCACTCAAGGTGCATTCGTCCGTGTTaGAGGCGATGTAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: RDPCSIIWPKLLGRGHSRCIRPC*RRCSRP
Trigger: GGGGCGACTACATCGCCTCCAACACGGACGAATGCA...CCTTGAGTGCCCCCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGGGTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp ATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCCGGCGTACATCAGTGTaGCTGTGCATTCGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: MKRFPAVGVAGCWHPNRRRRTSV*LCIRPC
Trigger: ACACGGACGAATGCACAGCCACACTGATGTACGCCG...GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTTGGAGTCATCTGCATTaGGCTGGCACTGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: SGCCRMLAPKSPQACKGAWSHLH*AGTGHS
Trigger: AGAATGACCAGTGCCAGCCCAATGCAGATGACTCCA...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCATGGAGTCATCTGCATTaGGCTGGCACTGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: LAPKSPQACKGAMQGEEAWSHLH*AGTGHS
Trigger: AGAATGACCAGTGCCAGCCCAATGCAGATGACTCCA...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGTGGTCTTCATCCACCTaGAGTCATCTGCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQWSSST*SHLHWA
Trigger: AGCCCAATGCAGATGACTCCAGGTGGATGAAGACCA...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATCACCAGCACAGGCTTaGGTACTTTGGTCCATACTG +
Preference number: 4 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLSPAQA*VLWSIL
Trigger: CAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGA...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp CCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGAGGCCACCCCTGTTATaGCAATGTTTCTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PNRRRLAKVLCKVRRQVRRPPLL*QCFSPA
Trigger: TGCTGGTGAGAAACATTGCCATAACAGGGGTGGCCT...CCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp CATCCCACTCATCAAACCGAATGCCTGTGCCGAGGGAGTAGCGGCCCTCAGCGCTCAGGGTCACACTGGTaGCAAGAAGTTTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: HPTHQTECLCRGSSGPQRSGSHW*QEVSPL
Trigger: TAAAGGAGAAACTTCTTGCCACCAGTGTGACCCTGA...GCGCTGAGGGCCGCTACTCCCTCGGCACAGGCATTCGGTTTGATGAGTGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTAGTGTCAGCACAGGCTTaGGTACTTTGGTCCATACTG +
Preference number: 4 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLVSAQA*VLWSIL
Trigger: CAGTATGGACCAAAGTACCCAAGCCTGTGCTGACAC...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529753.5
CDS-3UTR TCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGGGAGTGGCAGGTTCCTaGATCTCGGTCAATATAGTA +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRGVAGS*ISVNIV
Trigger: TACTATATTGACCGAGATTCAGGAACCTGCCACTCC...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TCCACACTGTGGAATTCCCATCCTTTCTCTGTGGTCTTCATCCACCTGGAGTCAATGGTAGTCAGCCACTaGGCAGAGCGGGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: STLWNSHPFSVVFIHLESMVVSH*AERASS
Trigger: GCTGCTTGCCCGCTCTGCTCAGTGGCTGACTACCAT...TGACTCCAGGTGGATGAAGACCACAGAGAAAGGATGGGAATTCCACAGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp AAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCATGTCTTCAGCGGCACTaGGTCAAATCCATCAGGAGT +
Preference number: 4 (lower is better)
Translates to: KSPQACKGAMQGEEAGEACLQRH*VKSIRS
Trigger: ACTCCTGATGGATTTGACTCAGTGCCGCTGAAGACA...TGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGTGTCTTCAGCGGCACTaGGTCAAATCCATCAGGAGT +
Preference number: 4 (lower is better)
Translates to: RMLAPKSPQACKGAMQGECLQRH*VKSIRS
Trigger: ACTCCTGATGGATTTGACTCAGTGCCGCTGAAGACA...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCCAGTGGCTAATCAGATaGGCATTTTGTGGCAGACTA +
Preference number: 4 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCQWLIR*AFCGRL
Trigger: TAGTCTGCCACAAAATGCTCATCTGATTAGCCACTG...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGTACTTTGGTCCATACTaGGAAGGCTGTGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GCCRMLAPKSPQACKGAMYFGPY*EGCGSP
Trigger: TGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTA...CATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGTACTTTGGTCCATACTaGGAAGGCTGTGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CWHPNRRRLAKVLCKVRRYFGPY*EGCGSP
Trigger: TGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTA...CCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCTACTTTGGTCCATACTaGGAAGGCTGTGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCYFGPY*EGCGSP
Trigger: TGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTA...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGTGGCCCATTTGTACATaGGTTGTGTCAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: RMLAPKSPQACKGAMQGEWPICT*VVSAQA
Trigger: AGCCTGTGCTGACACAACTCATGTACAAATGGGCCA...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529753.5
CDS-3UTR GCA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTTTTATTCTCTGTGTCTaGCATCACCGACTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGFILCV*HHRLRR
Trigger: CCTCCGCAGTCGGTGATGGCAGACACAGAGAATAAA...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp AAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCATTTATTCTCTGTGTCTaGCATCACCGACTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: KSPQACKGAMQGEEAGEAFILCV*HHRLRR
Trigger: CCTCCGCAGTCGGTGATGGCAGACACAGAGAATAAA...TGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGAGGTATAGGACTGTTTaGCTTTGGAACCTTTCCACG +
Preference number: 4 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVRYRTV*LWNLST
Trigger: CGTGGAAAGGTTCCAAAGGCAAACAGTCCTATACCT...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGGTGTACTTCCTGCTTaGCTCATGAAAAGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: APKSPQACKGAMQGEEAGGVLPA*LMKSGP
Trigger: AGGACCACTTTTCATGAGGCAAGCAGGAAGTACACC...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCATGTTGCGTGAGAAGGTaGAATCGTTGTAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: LAPKSPQACKGAMQGEEACCVRR*NRCSTE
Trigger: CTCTGTGCTACAACGATTGCACCTTCTCACGCAACA...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTTGTTGCGTGAGAAGGTaGAATCGTTGTAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SGCCRMLAPKSPQACKGACCVRR*NRCSTE
Trigger: CTCTGTGCTACAACGATTGCACCTTCTCACGCAACA...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAAGAGTGACAGTGTTTaGCAAAGCGGAGAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGKSDSV*QSGEVV
Trigger: TACAACTTCTCCGCTTTGGCAAACACTGTCACTCTT...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGCAGATGGTGACTCTCTaGTCAGGCAGAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: RMLAPKSPQACKGAMQGEQMVTL*SGREMP
Trigger: TGGCATTTCTCTGCCTGAGCAGAGAGTCACCATCTG...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp CACCTCCCAGCCTGTCATGCCCTTGTACTCGAAGTTGATCCCACTGAGAACGGTCTTGCAAAGGTGCTATaGAAGGTGAGGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HLPACHALVLEVDPTENGLAKVL*KVRRQV
Trigger: CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAG...ACCGTTCTCAGTGGGATCAACTTCGAGTACAAGGGCATGACAGGCTGGGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGAAATCGCCGCAGGCTTaGAAAGGTGCTATGCAAGGT +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEEKSPQA*KGAMQG
Trigger: ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp AGAGACCCCTGTTCCATAATATGGCCCAAACTTCTAGGACGGGGGCACTCAAGGGCTTGTCTGCATACGTaGCAGGTTTGCAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RDPCSIIWPKLLGRGHSRACLHT*QVCRGS
Trigger: GCTTCCCCTGCAAACCTGGCACGTATGCAGACAAGC...CCTTGAGTGCCCCCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGGGTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGACAGGAGCTGGCTaGTTGGAGGTAAATGATTTG +
Preference number: 4 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQVTGAG*LEVNDL
Trigger: CAAATCATTTACCTCCAAGCAGCCAGCTCCTGTCAC...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp TCCTGGTCGGAGTGTTGCGTGAGAAGGTGCAATCGTTGTAGCACAGAGAGTGGAGGTTTTGAAGAAGCCTaGGTTGCAGGGTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SWSECCVRRCNRCSTESGGFEEA*VAGWAV
Trigger: CACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACC...TCCACTCTCTGTGCTACAACGATTGCACCTTCTCACGCAACACTCCGACCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGTACAGTCTGAGCCATTaGAGTAGGAACCATATGGGC +
Preference number: 4 (lower is better)
Translates to: PKSPQACKGAMQGEEAGEYSLSH*SRNHMG
Trigger: GCCCATATGGTTCCTACTCCAATGGCTCAGACTGTA...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CAGGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGTCGTTTCCATGTTTGTaGGCAGCGTGTTCCACCATT +
Preference number: 4 (lower is better)
Translates to: QAVPLTGPCLGLLRMSSASFPCL*AACSTI
Trigger: AATGGTGGAACACGCTGCCCACAAACATGGAAACGA...CGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATCGTTTCCATGTTTGTaGGCAGCGTGTTCCACCATT +
Preference number: 4 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLSFPCL*AACSTI
Trigger: AATGGTGGAACACGCTGCCCACAAACATGGAAACGA...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCCGGAGGTCTAAATCCTaGCACAACCAGAGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCRRSKS*HNQSEN
Trigger: ATTCTCACTCTGGTTGTGCCAGGATTTAGACCTCCG...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGCGGAGGTCTAAATCCTaGCACAACCAGAGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: AGCWHPNRRRLAKVLCKVRRSKS*HNQSEN
Trigger: ATTCTCACTCTGGTTGTGCCAGGATTTAGACCTCCG...CACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGCAAGGACTGTTTGCCTTTaGAACCTTTCCACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: AVPLTGPCLGLLRMSSAARTVCL*NLSTSP
Trigger: TGGAGACGTGGAAAGGTTCCAAAGGCAAACAGTCCT...TGCCGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGAGGACTGTTTGCCTTTaGAACCTTTCCACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQRTVCL*NLSTSP
Trigger: TGGAGACGTGGAAAGGTTCCAAAGGCAAACAGTCCT...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TGCAGCCATCACAGGTCCCATCCGAGCACGTTCCTGGCAGCAGCAAACTTCCAGTCTTGGCAACGTCATTaGTGTACTTCCTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: CSHHRSHPSTFLAAANFQSWQRH*CTSCLP
Trigger: AGGCAAGCAGGAAGTACACCAATGACGTTGCCAAGA...CTGGAAGTTTGCTGCTGCCAGGAACGTGCTCGGATGGGACCTGTGATGGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTTCTTGGCAACGTCATTaGTGTACTTCCTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: APKSPQACKGAMQGEEAGSWQRH*CTSCLP
Trigger: AGGCAAGCAGGAAGTACACCAATGACGTTGCCAAGA...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGACATTTTCCTACCCTaGTTTCCACAGAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQDIFLP*FPQRLR
Trigger: CCTCAGTCTCTGTGGAAACCAGGGTAGGAAAATGTC...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGACATTTTCCTACCCTaGTTTCCACAGAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: PKSPQACKGAMQGEEAGEDIFLP*FPQRLR
Trigger: CCTCAGTCTCTGTGGAAACCAGGGTAGGAAAATGTC...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGTGGAAAAGTTCAGCTaGGGAGGTGATTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEEVEKFS*GGDSIQ
Trigger: CTGGATGGAATCACCTCCCCAGCTGAACTTTTCCAC...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGTATGGCTCTGGCGGATaGGCCATTTTGGGAAACAAG +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEEYGSGG*AILGNK
Trigger: CTTGTTTCCCAAAATGGCCCATCCGCCAGAGCCATA...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp AAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCACAGGCTTGGGTACTTTaGTCCATACTGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KSPQACKGAMQGEEAGEAQAWVL*SILRRL
Trigger: CAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTG...TGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCAGCTTCACTGCCCCCTCAAGGTCCTCGCTACAGATTTTCGGCTTGGCCCATTTCACCAGCACAGGCTTaGGTACTTTGGTCCATACTG +
Preference number: 4 (lower is better)
Translates to: AASLPPQGPRYRFSAWPISPAQA*VLWSIL
Trigger: CAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGA...AATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGAGGGGGCAGTGAAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CAA 72 bp GGTGCTGGCGTATGGGCCTGGGATTCAGTTCCTTTTTaGGCCAGCCTAGACGTTTATTCTGTGCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GAGVWAWDSVPF*ASLDVYSVPEQ
Trigger: CTGCTCAGGCACAGAATAAACGTCTAGGCTGGCCAAAAAAGGAACTGAATCCCAGGCCCATACGCCAGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 72 bp TTGGCTGGGCAAAGTTTGCAGAAAGAGGAGCCCTGCTaGTCTGCATACGTGCCAGGTTTGCAGGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LAGQSLQKEEPC*SAYVPGLQGKH
Trigger: ATGCTTCCCCTGCAAACCTGGCACGTATGCAGACAAGCAGGGCTCCTCTTTCTGCAAACTTTGCCCAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CAA 72 bp GCCACCTCCCAGCCTGTCATGCCCTTGTACTCGAAGTaGATCCCACTGAGAACGGTCGTTTCCATGTTTGTG +
Preference number: 4 (lower is better)
Translates to: ATSQPVMPLYSK*IPLRTVVSMFV
Trigger: CACAAACATGGAAACGACCGTTCTCAGTGGGATCAACTTCGAGTACAAGGGCATGACAGGCTGGGAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAAATTCACACCCACCATaGAGTAGAGCTCACAGTTCA +
Preference number: 4 (lower is better)
Translates to: LAPKSPQACKGAMQGEEANSHPP*SRAHSS
Trigger: TGAACTGTGAGCTCTACTTCATGGTGGGTGTGAATT...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAATTCCTGCTTGCCTCATaGAAAGTGGTCCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQFLLAS*KVVLWK
Trigger: CTTCCAGAGGACCACTTTTCATGAGGCAAGCAGGAA...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGGAGTGGCAGGTTCCTaGATCTCGGTCAATATAGTA +
Preference number: 4 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGGVAGS*ISVNIV
Trigger: TACTATATTGACCGAGATTCAGGAACCTGCCACTCC...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GGTGCCCAAGTATTGCTGAGGCTACAGAAGACTTTAGGCTGGAGCTCAGGAGCTTGGTTTTGCAGATGGTaGCTCTCTGCTCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GAQVLLRLQKTLGWSSGAWFCRW*LSAQAE
Trigger: CTCTGCCTGAGCAGAGAGTCACCATCTGCAAAACCA...AGCTCCTGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACTTGGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp TTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGCATTTTCACTCCCTTTaGGCTGGTTATCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LQDAGTQIAAGLQRCYARHFHSL*AGYPGE
Trigger: TTCCCCTGGATAACCAGCTCAAAGGGAGTGAAAATG...CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp TGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGGGAATTTTCCTCACTaGCAGGGTTTGCTATGTCTG +
Preference number: 4 (lower is better)
Translates to: WVLQDAGTQIAAGLQRCYGNFPH*QGLLCL
Trigger: CAGACATAGCAAACCCTGTCAGTGAGGAAAATTCCC...ATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGCGTTTATTCTGTGCCTaGGCAGATGCGTTAAGCTTA +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRRLFCA*ADALSL
Trigger: TAAGCTTAACGCATCTGCTCAGGCACAGAATAAACG...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp ATAAGAATTATGAGCAGACGAAGCTATGGCTCTGGCGGATGGGCCATTTTGGGAGACTCTTTGCAGGCATaGAGCTCCGGTCCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: IRIMSRRSYGSGGWAILGDSLQA*SSGPVP
Trigger: GGGAACGGGACCGGAGCTTCATGCCTGCAAAGAGTC...TCCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTCATAATTCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GTCACTTGCAAATGCCATCCCCTTTCTATATCTACCATCTGGTCACCAAATGGTAGCACTCGGTGCCCTTaGTGGGGTCAGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VTCKCHPLSISTIWSPNGSTRCP*WGQAGW
Trigger: CCAGCCTGCCTGACCCCATCAAGGGCACCGAGTGCT...ACCATTTGGTGACCAGATGGTAGATATAGAAAGGGGATGGCATTTGCAAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAATGGCCCATTTGTACATaGGTTGTGTCTCTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQWPICT*VVSLRW
Trigger: CCAACGGAGAGACACAACTCATGTACAAATGGGCCA...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR TCA 90 bp TGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCTGAGACTGAACTATaGTTCAGCTCCCAAAGGACT +
Preference number: 4 (lower is better)
Translates to: WVLQDAGTQIAAGLQRCYAETEL*FSSQRT
Trigger: AGTCCTTTGGGAGCTGAATCATAGTTCAGTCTCAGC...ATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527501.1
CDS-3UTR GCA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTAGGTATAGGACTGTTTaGCTTTGGAACCTTTCCACG +
Preference number: 4 (lower is better)
Translates to: SGCCRMLAPKSPQACKGARYRTV*LWNLST
Trigger: CGTGGAAAGGTTCCAAAGGCAAACAGTCCTATACCT...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTAAGGTATAGGACTGTTTaGCTTTGGAACCTTTCCACG +
Preference number: 4 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLRYRTV*LWNLST
Trigger: CGTGGAAAGGTTCCAAAGGCAAACAGTCCTATACCT...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp GTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGTTGATCTCCCAGAACTaGAGGACTGGGTCACATCAT +
Preference number: 4 (lower is better)
Translates to: VAGCWHPNRRRLAKVLCKLISQN*RTGSHH
Trigger: ATGATGTGACCCAGTCCTGCAGTTCTGGGAGATCAA...CTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAAAATCGCCGCAGGCTTaGAAAGGTGCTATGCAAGGT +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQKSPQA*KGAMQG
Trigger: ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGCTGTATCCCCTAAAGTaGCCCATTAAAATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQLYPLK*PIKILA
Trigger: GGCCAAGATTTTAATGGGGCACTTTAGGGGATACAG...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp GTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCACTGTGCCTGAGCAGATaGGTTAAGCTTAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLQDAGTQIAAGLQRCYALCLSR*VKLRSR
Trigger: TCTGCTTCTAAGCTTAACGCATCTGCTCAGGCACAG...TGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAATAGAGGACATTATTaGCTCGATTTAGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGNRGHY*LDLAPH
Trigger: GTGTGGAGCTAAATCGAGGCAATAATGTCCTCTATT...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR GCA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGAATAATCTTTGTCTGTaGAAGCTGGGCGCACGTTAC +
Preference number: 4 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQNNLCL*KLGARY
Trigger: GTAACGTGCGCCCAGCTTGCACAGACAAAGATTATT...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR GCA 90 bp GCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGCAAATAATCTTTGTCTGTaGAAGCTGGGCGCACGTTAC +
Preference number: 4 (lower is better)
Translates to: AVPLTGPCLGLLRMSSAANNLCL*KLGARY
Trigger: GTAACGTGCGCCCAGCTTGCACAGACAAAGATTATT...TGCCGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATGAAACTCCCCGGCGTTaGAGGAGAAGGCTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNETPRR*RRRLFA
Trigger: TGCAAAGAGCCTTCTCCTGCAACGCCGGGGAGTTTC...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGTACAGTCTGAGCCATTaGAGTAGGAACCATATGGGC +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEEYSLSH*SRNHMG
Trigger: GCCCATATGGTTCCTACTCCAATGGCTCAGACTGTA...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp AAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCATCGTTTCCATGTTTGTaGGCAGCGTGTTCCACCATT +
Preference number: 4 (lower is better)
Translates to: KSPQACKGAMQGEEAGEASFPCL*AACSTI
Trigger: AATGGTGGAACACGCTGCCCACAAACATGGAAACGA...TGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp ATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCTTTGGAAGTGAAGCTTaGCCCTCCAGCAAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: MKRFPAVGVAGCWHPNRRFGSEA*PSSKSD
Trigger: GTCACTCTTGCTGGAGGGCCAAGCTTCACTTCCAAA...GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp AATAAGAGACCCCTGTTCCATAATATGGCCCAAACTTCTAGGACGGGGGCACTCGTAGCCTGTCACCTCTaGGGGGATGATGACTGCCTG +
Preference number: 4 (lower is better)
Translates to: NKRPLFHNMAQTSRTGALVACHL*GDDDCL
Trigger: CAGGCAGTCATCATCCCCCCAGAGGTGACAGGCTAC...GAGTGCCCCCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGGGTCTCTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp GGCAGGAGTGGCAGGTTCCTGAATCTCGGTCAATATAGTAACCAGCAGGACAAGATCCGAGCACGTTCCTaGCAGCAGCAAACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRSGRFLNLGQYSNQQDKIRARS*QQQTSR
Trigger: CCTGGAAGTTTGCTGCTGCCAGGAACGTGCTCGGAT...CTTGTCCTGCTGGTTACTATATTGACCGAGATTCAGGAACCTGCCACTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp AATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCACCAGAGCATAGCTTaGGTTCTCGCCACACGTAAG +
Preference number: 4 (lower is better)
Translates to: NEEISSSGCCRMLAPKSPHQSIA*VLATRK
Trigger: CTTACGTGTGGCGAGAACCCAAGCTATGCTCTGGTG...CGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCGGATGGGCCATTTTaGGAAACAAGATACAAGCAA +
Preference number: 4 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQADGPF*ETRYKQ
Trigger: TTGCTTGTATCTTGTTTCCCAAAATGGCCCATCCGC...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTTTGCTATGTCTGTaGGTAAACCCAACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LAPKSPQACKGAMQGEEAGLLCL*VNPTED
Trigger: ATCCTCTGTTGGGTTTACCCACAGACATAGCAAACC...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp GTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCATCCTTCCTTGAAGACTaGTTTGATTCTGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VLQDAGTQIAAGLQRCYASFLED*FDSGAG
Trigger: GCCAGCACCAGAATCAAACCAGTCTTCAAGGAAGGA...TGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp AATAAGAGACCCCTGTTCCATAATATGGCCCAAACTTCTAGGACGGGGGCACTCCACTTGAACCCAGGATaGGGAGGCTGCAGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: NKRPLFHNMAQTSRTGALHLNPG*GGCSEP
Trigger: TGGCTCACTGCAGCCTCCCCATCCTGGGTTCAAGTG...GAGTGCCCCCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGGGTCTCTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp GGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGCCATGGCTTACATGACTaGTCCTTCATATCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GSASHRSMSRPPEDVFSGHGLHD*SFISRN
Trigger: GTTTCTGGATATGAAGGACCAGTCATGTAAGCCATG...GCCGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp TGTCTGCATACGTGCCAGGTTTGCAGGGGAAGCATTCTGAAGTGTAGGCCACCCAAGTACAGTTCCCGGTaGACTCAGCAGCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: CLHTCQVCRGSILKCRPPKYSSR*TQQHCH
Trigger: ATGACAGTGCTGCTGAGTCCACCGGGAACTGTACTT...GGGTGGCCTACACTTCAGAATGCTTCCCCTGCAAACCTGGCACGTATGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp ATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCTCAGGGTCACACTGGTaGCAAGAAGTTTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: ISSSGCCRMLAPKSPQACSGSHW*QEVSPL
Trigger: TAAAGGAGAAACTTCTTGCCACCAGTGTGACCCTGA...GCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
3UTR CAA 72 bp CCTGACTCACCCTCAGGAATCCGGAGGTCAGTGACATaGTCGGTGCACACAGACATTTTCCTACCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: PDSPSGIRRSVT*SVHTDIFLPWF
Trigger: AAACCAGGGTAGGAAAATGTCTGTGTGCACCGACAATGTCACTGACCTCCGGATTCCTGAGGGTGAGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp GTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAATTCACACCCACCATaGAGTAGAGCTCACAGTTCA +
Preference number: 4 (lower is better)
Translates to: VLQDAGTQIAAGLQRCYANSHPP*SRAHSS
Trigger: TGAACTGTGAGCTCTACTTCATGGTGGGTGTGAATT...TGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GGTGCTGTTGTTGGTTTTGAAGAAGCCTGGGTTGCAGGGTGGGCAGTGGGTCTTGGAGTGGCAGGTTCCTaGATCTCGGTCAATATAGTA +
Preference number: 4 (lower is better)
Translates to: GAVVGFEEAWVAGWAVGLGVAGS*ISVNIV
Trigger: TACTATATTGACCGAGATTCAGGAACCTGCCACTCC...AAGACCCACTGCCCACCCTGCAACCCAGGCTTCTTCAAAACCAACAACAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp GGCAGGAGTGGCAGGTTCCTGAATCTCGGTCAATATAGTAACCAGCAGGACAAGAGATTTGGAGAACCCTaGCTCACCCTCAGGAATCCG +
Preference number: 4 (lower is better)
Translates to: GRSGRFLNLGQYSNQQDKRFGEP*LTLRNP
Trigger: CGGATTCCTGAGGGTGAGTCAGGGTTCTCCAAATCT...CTTGTCCTGCTGGTTACTATATTGACCGAGATTCAGGAACCTGCCACTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp GGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGGATCTTCCCAAAGAGTaGCTTCTTGCTGGTAAAGAT +
Preference number: 4 (lower is better)
Translates to: GCCRMLAPKSPQACKGAMDLPKE*LLAGKD
Trigger: ATCTTTACCAGCAAGAAGTCACTCTTTGGGAAGATC...CATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCACCTCTTGGAGGTAAATaGTTTGATCTTCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LAPKSPQACKGAMQGEEAPLGGK*FDLPKE
Trigger: CTCTTTGGGAAGATCAAATCATTTACCTCCAAGAGG...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR TCA 90 bp AGAGACCCCTGTTCCATAATATGGCCCAAACTTCTAGGACGGGGGCACTCAAGGGGATCCAGGCTGCTATaGAGATTATCCACCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RDPCSIIWPKLLGRGHSRGSRLL*RLSTRE
Trigger: TTCCCTGGTGGATAATCTTCATAGCAGCCTGGATCC...CCTTGAGTGCCCCCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGGGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp ATAAGAATTATGAGCAGACGAAGCTATGGCTCTGGCGGATGGGCCATTTTGGGATGGGCAATTGGGGCTTaGCCAAGGGAAGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: IRIMSRRSYGSGGWAILGWAIGA*PREGHP
Trigger: AGGGTGACCTTCCCTTGGTCAAGCCCCAATTGCCCA...TCCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTCATAATTCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAAAGAAAGCTATTCAGTaGGACAGCAGGTGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQKKAIQ*DSRCPS
Trigger: ACTTGGGCACCTGCTGTCTCACTGAATAGCTTTCTT...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTACGAAAAACTCAAAGATaGTGCTGGAGTCTGGATAGT +
Preference number: 4 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLRKTQR*CWSLDS
Trigger: ACTATCCAGACTCCAGCATCATCTTTGAGTTTTTCG...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp GCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGCACGAAAAACTCAAAGATaGTGCTGGAGTCTGGATAGT +
Preference number: 4 (lower is better)
Translates to: AVPLTGPCLGLLRMSSAARKTQR*CWSLDS
Trigger: ACTATCCAGACTCCAGCATCATCTTTGAGTTTTTCG...TGCCGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp ATTTTCACTCCCTTTGAGCTGGTTATCCAGGGGAAATGGATCCAGGCTGCTATGGCAGGGGAAGCATTCTaGAGTGTAGGCCACCCCTGT +
Preference number: 4 (lower is better)
Translates to: IFTPFELVIQGKWIQAAMAGEAF*SVGHPC
Trigger: ACAGGGGTGGCCTACACTTCAGAATGCTTCCCCTGC...CATAGCAGCCTGGATCCATTTCCCCTGGATAACCAGCTCAAAGGGAGTGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GGTGCCCAAGTATTGCTGAGGCTACAGAAGACTTTAGGCTGGAGCTCAGGAGCTTGGCCCATTTGTACATaGGTTGTGTCTCTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: GAQVLLRLQKTLGWSSGAWPICT*VVSLRW
Trigger: CCAACGGAGAGACACAACTCATGTACAAATGGGCCA...AGCTCCTGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACTTGGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGCACCTTGGAGGTAAATaGTTTGATCTTCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRHLGGK*FDLPKE
Trigger: CTCTTTGGGAAGATCAAATCATTTACCTCCAAGGTG...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527501.1
CDS-3UTR TCA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCCTGCTTGGAGGTAAATaGTTTGATCTTCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCLLGGK*FDLPKE
Trigger: CTCTTTGGGAAGATCAAATCATTTACCTCCAAGCAG...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp TCCACACTGTGGAATTCCCATCCTTTCTCTGTGGTCTTCATCCACCTGGAGTCACTGAAAGAGAGATGGTaGCAGGAGCTGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: STLWNSHPFSVVFIHLESLKERW*QELAAW
Trigger: CCAAGCAGCCAGCTCCTGTCACCATCTCTCTTTCAG...TGACTCCAGGTGGATGAAGACCACAGAGAAAGGATGGGAATTCCACAGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp ATTCTGAAGTGTAGGCCACCCCTGTTATGGCAATGTTTCTCACCAGCACAGGCTTCCAGCAGTGGGTGTTaGAGGATGCTGGCACCCAAA +
Preference number: 4 (lower is better)
Translates to: ILKCRPPLLWQCFSPAQASSSGC*RMLAPK
Trigger: TTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGA...AGCCTGTGCTGGTGAGAAACATTGCCATAACAGGGGTGGCCTACACTTCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp TACAGGTGCCTGCAGAGATGCCCACTTTCAGCCAGAAATCTATGGTTTTGCAGACCACCTGGAGTCATCTaGATTGGGCTGGCACTGGTC +
Preference number: 4 (lower is better)
Translates to: YRCLQRCPLSARNLWFCRPPGVI*IGLALV
Trigger: GACCAGTGCCAGCCCAATGCAGATGACTCCAGGTGG...TCTGCAAAACCATAGATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp ATAAGAATTATGAGCAGACGAAGCTATGGCTCTGGCGGATGGGCCATTTTGGGAGGAGTAGGAACCATATaGGCAGGGCTGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: IRIMSRRSYGSGGWAILGGVGTI*AGLAGA
Trigger: AGCACCTGCCAGCCCTGCCCATATGGTTCCTACTCC...TCCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTCATAATTCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp ATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCTATCTGCATCCACACTaGGGGAAGTTCCAACATGGA +
Preference number: 4 (lower is better)
Translates to: MKRFPAVGVAGCWHPNRRYLHPH*GKFQHG
Trigger: TCCATGTTGGAACTTCCCCCAGTGTGGATGCAGATA...GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp TGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGTCTAAGGGCTGTCTGTaGCCTTTGTCACAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: CWHPNRRRLAKVLCKVRRSKGCL*PLSQKK
Trigger: TTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGA...CCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp GGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGCGATGATGCTGGAGTCTaGATAGTAGTATTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: GSASHRSMSRPPEDVFSGDDAGV*IVVFEV
Trigger: AACTTCGAATACTACTATCCAGACTCCAGCATCATC...GCCGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGTTTAGCTCCACACTGTaGAATTCCCATCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRFSSTL*NSHPFS
Trigger: AGAGAAAGGATGGGAATTCCACAGTGTGGAGCTAAA...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGATACTGAGAAGGCTGTaGTTCTCCAATAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: PNRRRLAKVLCKVRRQVRILRRL*FSNRGH
Trigger: ATGTCCTCTATTGGAGAACCACAGCCTTCTCAGTAT...CCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTATACTGAGAAGGCTGTaGTTCTCCAATAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: APKSPQACKGAMQGEEAGILRRL*FSNRGH
Trigger: ATGTCCTCTATTGGAGAACCACAGCCTTCTCAGTAT...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCTATTTGAATAAGAGTTaGCTGGGCAAAGTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGYLNKS*LGKVCR
Trigger: TCTGCAAACTTTGCCCAGCCAACTCTTATTCAAATA...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAATTGTCAGGGTCACACTaGTGGCAAGAAGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQLSGSH*WQEVSP
Trigger: AGGAGAAACTTCTTGCCACCAGTGTGACCCTGACAA...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAACTCAGAATTGCTCAGTaGGGAACAGCTGAGACTGAA +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQLRIAQ*GTAETE
Trigger: TTCAGTCTCAGCTGTTCCCCACTGAGCAATTCTGAG...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527501.1
CDS-3UTR TCA 90 bp AGCAAGAGTGACAGTGTTTGCCAAAGCGGAGAAGTTGTAGTTGAAAGTCCTGGTGCCCTCCAGCAAGAGTaGCAGTGTTTGCCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: SKSDSVCQSGEVVVESPGALQQE*QCLPKR
Trigger: CCGCTTTGGCAAACACTGTCACTCTTGCTGGAGGGC...ACCAGGACTTTCAACTACAACTTCTCCGCTTTGGCAAACACTGTCACTCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGATCTTCCCAAAGAGTaGCTTCTTGCTGGTAAAGAT +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEEDLPKE*LLAGKD
Trigger: ATCTTTACCAGCAAGAAGTCACTCTTTGGGAAGATC...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTCCTCTTGGAGGTAAATaGTTTGATCTTCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGPLGGK*FDLPKE
Trigger: CTCTTTGGGAAGATCAAATCATTTACCTCCAAGAGG...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR TCA 90 bp AGACTACCATTTTCACTCCCTTTGAGCTGGTTATCCAGGGGAAATGGATCCAGGTCTCAGTTCTTCCCCTaGCTCTGGCGGAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: RLPFSLPLSWLSRGNGSRSQFFP*LWRRDG
Trigger: ACCATCTCTCCGCCAGAGTCAGGGGAAGAACTGAGA...CCTGGATCCATTTCCCCTGGATAACCAGCTCAAAGGGAGTGAAAATGGTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGCGAAAAACTCAAAGATaGTGCTGGAGTCTGGATAGT +
Preference number: 4 (lower is better)
Translates to: RMLAPKSPQACKGAMQGERKTQR*CWSLDS
Trigger: ACTATCCAGACTCCAGCATCATCTTTGAGTTTTTCG...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR TCA 90 bp ATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAGTTTCTCCTTTATTTaGATAAGAGTTGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ISSSGCCRMLAPKSPQACSFSFI*IRVGWA
Trigger: TGCCCAGCCAACTCTTATTCAAATAAAGGAGAAACT...GCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR TCA 90 bp GCAGGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCAGTTTCTCCTTTATTTaGATAAGAGTTGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: AGSASHRSMSRPPEDVFSSFSFI*IRVGWA
Trigger: TGCCCAGCCAACTCTTATTCAAATAAAGGAGAAACT...GCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp AGTCTAAGGGCTGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTGAGACAGGCGCAGCTGTCAGCTaGTGGCAGGTCACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SLRAVCGLCHKRKLFSETGAAVS*WQVTVL
Trigger: AAGGACTGTGACCTGCCAGCAGCTGACAGCTGCGCC...TGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATAAATCGCCGCAGGCTTaGAAAGGTGCTATGCAAGGT +
Preference number: 4 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNKSPQA*KGAMQG
Trigger: ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR GCA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCGGTAATTTAAAGTCTTaGTCTGGTTTTACCCATTCT +
Preference number: 4 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGGNLKS*SGFTHS
Trigger: AGAATGGGTAAAACCAGAGCAAGACTTTAAATTACC...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp AGACTACCATTTTCACTCCCTTTGAGCTGGTTATCCAGGGGAAATGGATCCAGGCCATATGGGCAGGGCTaGCAGGTGCTGTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: RLPFSLPLSWLSRGNGSRPYGQG*QVLLLV
Trigger: AACCAACAACAGCACCTGCCAGCCCTGCCCATATGG...CCTGGATCCATTTCCCCTGGATAACCAGCTCAAAGGGAGTGAAAATGGTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp AGCAAGAGTGACAGTGTTTGCCAAAGCGGAGAAGTTGTAGTTGAAAGTCCTGGTGGAGTAGGAACCATATaGGCAGGGCTGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SKSDSVCQSGEVVVESPGGVGTI*AGLAGA
Trigger: AGCACCTGCCAGCCCTGCCCATATGGTTCCTACTCC...ACCAGGACTTTCAACTACAACTTCTCCGCTTTGGCAAACACTGTCACTCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp AGAGACCCCTGTTCCATAATATGGCCCAAACTTCTAGGACGGGGGCACTCAAGGTCTTGGCAACGTCATTaGTGTACTTCCTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RDPCSIIWPKLLGRGHSRSWQRH*CTSCLP
Trigger: AGGCAAGCAGGAAGTACACCAATGACGTTGCCAAGA...CCTTGAGTGCCCCCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGGGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCACTGGGTCACATCATTaGACCTATAAAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCTGSHH*TYKRRS
Trigger: TGATCTTCTTTTATAGGTCCAATGATGTGACCCAGT...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGCATTCATCACCAGCTTaGAGTACTTGTACTCTAGTT +
Preference number: 4 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRHSSPA*STCTLV
Trigger: AACTAGAGTACAAGTACTCCAAGCTGGTGATGAATG...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGCATTCATCACCAGCTTaGAGTACTTGTACTCTAGTT +
Preference number: 4 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQHSSPA*STCTLV
Trigger: AACTAGAGTACAAGTACTCCAAGCTGGTGATGAATG...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCTGGGGAGGTGATTCCATCCAGAGTCATATCTGTTGTCACCCCAATAAGTCGAAGAGATTTCCAGCAGTaGGTGTTGCAGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGEVIPSRVISVVTPISRRDFQQ*VLQDAG
Trigger: GCCAGCATCCTGCAACACCCACTGCTGGAAATCTCT...TCGACTTATTGGGGTGACAACAGATATGACTCTGGATGGAATCACCTCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGCATGGCTTACATGACTaGTCCTTCATATCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: RMLAPKSPQACKGAMQGEHGLHD*SFISRN
Trigger: GTTTCTGGATATGAAGGACCAGTCATGTAAGCCATG...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGCATGGCTTACATGACTaGTCCTTCATATCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VAGCWHPNRRRLAKVLCKHGLHD*SFISRN
Trigger: GTTTCTGGATATGAAGGACCAGTCATGTAAGCCATG...CTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp ATAAGAATTATGAGCAGACGAAGCTATGGCTCTGGCGGATGGGCCATTTTGGGACGGCGTACATCAGTGTaGCTGTGCATTCGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: IRIMSRRSYGSGGWAILGRRTSV*LCIRPC
Trigger: ACACGGACGAATGCACAGCCACACTGATGTACGCCG...TCCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTCATAATTCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTGATGATGCTGGAGTCTaGATAGTAGTATTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: SGCCRMLAPKSPQACKGADDAGV*IVVFEV
Trigger: AACTTCGAATACTACTATCCAGACTCCAGCATCATC...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
3UTR CAA 72 bp TCAAGGTCCTCGCTACAGATTTTCGGCTTGGCCCATTaGTACATGAGTTGTGTCTCTCCGTTGGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: SRSSLQIFGLAH*YMSCVSPLASQ
Trigger: CTGCGATGCCAACGGAGAGACACAACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp AATAAGAGACCCCTGTTCCATAATATGGCCCAAACTTCTAGGACGGGGGCACTCCGGAGAAGTTGTAGTTaGAAGTCCTGGTCGGAGTGT +
Preference number: 4 (lower is better)
Translates to: NKRPLFHNMAQTSRTGALRRSCS*KSWSEC
Trigger: ACACTCCGACCAGGACTTTCAACTACAACTTCTCCG...GAGTGCCCCCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGGGTCTCTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GGTGCCCAAGTATTGCTGAGGCTACAGAAGACTTTAGGCTGGAGCTCAGGAGCTGGCTCTAGTTCTCATTaGCTCTTACAAAGCCATTGC +
Preference number: 4 (lower is better)
Translates to: GAQVLLRLQKTLGWSSGAGSSSH*LLQSHC
Trigger: GCAATGGCTTTGTAAGAGTCAATGAGAACTAGAGCC...AGCTCCTGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACTTGGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGATGATGTCTATAGCATaGCAGTTACTGCATGTTCCA +
Preference number: 4 (lower is better)
Translates to: MLAPKSPQACKGAMQGEEMMSIA*QLLHVP
Trigger: TGGAACATGCAGTAACTGTCATGCTATAGACATCAT...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGAAAAACCCTACTGCTTaGATACACCACAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: GCCRMLAPKSPQACKGAMKNPTA*IHHNLH
Trigger: ATGAAGATTGTGGTGTATTCAAGCAGTAGGGTTTTT...CATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATTTGATCTCCCAGAACTaGAGGACTGGGTCACATCAT +
Preference number: 4 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNLISQN*RTGSHH
Trigger: ATGATGTGACCCAGTCCTGCAGTTCTGGGAGATCAA...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR GCA 90 bp AGACTACCATTTTCACTCCCTTTGAGCTGGTTATCCAGGGGAAATGGATCCAGGCTTGCAAAGGTGCTATaGAAGGTGAGGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RLPFSLPLSWLSRGNGSRLAKVL*KVRRQV
Trigger: CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAG...CCTGGATCCATTTCCCCTGGATAACCAGCTCAAAGGGAGTGAAAATGGTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp TTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGCTAGTCACTTGCAAATaGCATCCCCTTTCTATATCT +
Preference number: 4 (lower is better)
Translates to: LQDAGTQIAAGLQRCYARLVTCK*HPLSIS
Trigger: AGATATAGAAAGGGGATGGCATTTGCAAGTGACTAG...CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp TACAGGTGCCTGCAGAGATGCCCACTTTCAGCCAGAAATCTATGGTTTTGCAGAACATCAGTGTGGCTGTaGATTCGTCCGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: YRCLQRCPLSARNLWFCRTSVWL*IRPCWR
Trigger: CCTCCAACACGGACGAATGCACAGCCACACTGATGT...TCTGCAAAACCATAGATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp GTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAATAGAGGACATTATTaGCTCGATTTAGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: VLQDAGTQIAAGLQRCYANRGHY*LDLAPH
Trigger: GTGTGGAGCTAAATCGAGGCAATAATGTCCTCTATT...TGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATAGGACTGTTTGCCTTTaGAACCTTTCCACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNRTVCL*NLSTSP
Trigger: TGGAGACGTGGAAAGGTTCCAAAGGCAAACAGTCCT...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp CAGGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGACTGGGTCACATCATTaGACCTATAAAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: QAVPLTGPCLGLLRMSSATGSHH*TYKRRS
Trigger: TGATCTTCTTTTATAGGTCCAATGATGTGACCCAGT...CGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp GTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCACATTCATCACCAGCTTaGAGTACTTGTACTCTAGTT +
Preference number: 4 (lower is better)
Translates to: VLQDAGTQIAAGLQRCYAHSSPA*STCTLV
Trigger: AACTAGAGTACAAGTACTCCAAGCTGGTGATGAATG...TGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCCCTGTTCCATAATATaGCCCAAACTTCTAGGACGG +
Preference number: 4 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNPCSII*PKLLGR
Trigger: CCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGG...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp ATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCTCTATATCTACCATCTaGTCACCAAATGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: MKRFPAVGVAGCWHPNRRSISTI*SPNGHW
Trigger: CCAGTGACCATTTGGTGACCAGATGGTAGATATAGA...GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCTACCAACAACAGCTTaGACAGACCACTTTAGCCCT +
Preference number: 4 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNLPTTA*TDHFSP
Trigger: AGGGCTAAAGTGGTCTGTCCAAGCTGTTGTTGGTAG...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGATGATGCTGGAGTCTaGATAGTAGTATTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGDDAGV*IVVFEV
Trigger: AACTTCGAATACTACTATCCAGACTCCAGCATCATC...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CCA 90 bp CCACTGAGAACGGTCGTTTCCATGTTTGTGGGCAGCGTGTTCCACCATTTGTATTGGAGTCATCTGCATTaGGCTGGCACTGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: PLRTVVSMFVGSVFHHLYWSHLH*AGTGHS
Trigger: AGAATGACCAGTGCCAGCCCAATGCAGATGACTCCA...ATACAAATGGTGGAACACGCTGCCCACAAACATGGAAACGACCGTTCTCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp ATTCTGAAGTGTAGGCCACCCCTGTTATGGCAATGTTTCTCACCAGCACAGGCTTGGTCTTCATCCACCTaGAGTCATCTGCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: ILKCRPPLLWQCFSPAQAWSSST*SHLHWA
Trigger: AGCCCAATGCAGATGACTCCAGGTGGATGAAGACCA...AGCCTGTGCTGGTGAGAAACATTGCCATAACAGGGGTGGCCTACACTTCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp CACCTCCCAGCCTGTCATGCCCTTGTACTCGAAGTTGATCCCACTGAGAACGGTTTTAGCTCCACACTGTaGAATTCCCATCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HLPACHALVLEVDPTENGFSSTL*NSHPFS
Trigger: AGAGAAAGGATGGGAATTCCACAGTGTGGAGCTAAA...ACCGTTCTCAGTGGGATCAACTTCGAGTACAAGGGCATGACAGGCTGGGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CAA 72 bp TTAAACTCTCCTAGCCTTCCTTCCTTGAAGACTGGTTaGATTCTGGTGCTGGCGTATGGGCCTGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: LNSPSLPSLKTG*ILVLAYGPGIQ
Trigger: CTGAATCCCAGGCCCATACGCCAGCACCAGAATCAAACCAGTCTTCAAGGAAGGAAGGCTAGGAGAGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 72 bp ATTGCCAGGGCAGCAGTGGCTAATCAGATGAGCATTTaGTGGCAGACTAGTCACTTGCAAATGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: IARAAVANQMSI*WQTSHLQMPSP
Trigger: AGGGGATGGCATTTGCAAGTGACTAGTCTGCCACAAAATGCTCATCTGATTAGCCACTGCTGCCCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 72 bp ACCCCTGTTATGGCAATGTTTCTCACCAGCACAGGCTaGGGTACTTTGGTCCATACTGAGAAGGCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: TPVMAMFLTSTG*GTLVHTEKAVV
Trigger: AACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGAGAAACATTGCCATAACAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CAA 72 bp GTCGTTTCCATGTTTGTGGGCAGCGTGTTCCACCATTaGTATTCAAATCCCACAGCAGGTTCAGTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VVSMFVGSVFHH*YSNPTAGSVPA
Trigger: TGCAGGGACTGAACCTGCTGTGGGATTTGAATACAAATGGTGGAACACGCTGCCCACAAACATGGAAACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp TTTGCCTTTGGAACCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACGTTCAGCTGGGGAGGTaGTTCCATCCAGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: FAFGTFPRLHRSVGPRIHVQLGR*FHPESY
Trigger: ATATGACTCTGGATGGAATCACCTCCCCAGCTGAAC...GTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGGTTCCAAAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp TACAGGTGCCTGCAGAGATGCCCACTTTCAGCCAGAAATCTATGGTTTTGCAGAAGCGCATGGCTTACATaGCTGGTCCTTCATATCCAG +
Preference number: 4 (lower is better)
Translates to: YRCLQRCPLSARNLWFCRSAWLT*LVLHIQ
Trigger: CTGGATATGAAGGACCAGTCATGTAAGCCATGCGCT...TCTGCAAAACCATAGATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp GCTGGGGAGGTGATTCCATCCAGAGTCATATCTGTTGTCACCCCAATAAGTCGATGTTGCGTGAGAAGGTaGAATCGTTGTAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: AGEVIPSRVISVVTPISRCCVRR*NRCSTE
Trigger: CTCTGTGCTACAACGATTGCACCTTCTCACGCAACA...TCGACTTATTGGGGTGACAACAGATATGACTCTGGATGGAATCACCTCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp TACAGGTGCCTGCAGAGATGCCCACTTTCAGCCAGAAATCTATGGTTTTGCAGAAGGTGCCTGCAGAGATaGCCACTTTCAGCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: YRCLQRCPLSARNLWFCRRCLQR*PLSARN
Trigger: ATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCT...TCTGCAAAACCATAGATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGAAAAACATTCCTTGTTaGCTCTCTTTGTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PKSPQACKGAMQGEEAGEKNIPC*LSLCFS
Trigger: AGAAAAGCACAAAGAGAGGCAACAAGGAATGTTTTT...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp TGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATAAGCAAAAACCCTACTaGTTGAATACACCACAATCT +
Preference number: 4 (lower is better)
Translates to: WVLQDAGTQIAAGLQRCYKQKPY*LNTPQS
Trigger: AGATTGTGGTGTATTCAAGCAGTAGGGTTTTTGCTT...ATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp TTTGCCTTTGGAACCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACTTAACGGTGCCAGATTaGTTCAGGTTGACGGCGTAC +
Preference number: 4 (lower is better)
Translates to: FAFGTFPRLHRSVGPRIHLTVPD*FRLTAY
Trigger: GTACGCCGTCAACCTGAAGCAATCTGGCACCGTTAA...GTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGGTTCCAAAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp ATTTTCACTCCCTTTGAGCTGGTTATCCAGGGGAAATGGATCCAGGCTGCTATGCATACGTGCCAGGTTTaGAGGGGAAGCATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: IFTPFELVIQGKWIQAAMHTCQV*RGSILK
Trigger: CTTCAGAATGCTTCCCCTGCAAACCTGGCACGTATG...CATAGCAGCCTGGATCCATTTCCCCTGGATAACCAGCTCAAAGGGAGTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp GTCACTTGCAAATGCCATCCCCTTTCTATATCTACCATCTGGTCACCAAATGGTATCCGAGCACGTTCCTaGCAGCAGCAAACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VTCKCHPLSISTIWSPNGIRARS*QQQTSR
Trigger: CCTGGAAGTTTGCTGCTGCCAGGAACGTGCTCGGAT...ACCATTTGGTGACCAGATGGTAGATATAGAAAGGGGATGGCATTTGCAAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp AATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGTTTAGCTCCACACTGTaGAATTCCCATCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NEEISSSGCCRMLAPKSPFSSTL*NSHPFS
Trigger: AGAGAAAGGATGGGAATTCCACAGTGTGGAGCTAAA...CGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp ATTTTCACTCCCTTTGAGCTGGTTATCCAGGGGAAATGGATCCAGGCTGCTATGCAGGCTTGGGTACTTTaGTCCATACTGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: IFTPFELVIQGKWIQAAMQAWVL*SILRRL
Trigger: CAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTG...CATAGCAGCCTGGATCCATTTCCCCTGGATAACCAGCTCAAAGGGAGTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp TTTGCCTTTGGAACCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACTTTGTCTGTGCAAGCTaGGCGCACGTTACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FAFGTFPRLHRSVGPRIHFVCAS*AHVTGR
Trigger: TCTTCCTGTAACGTGCGCCCAGCTTGCACAGACAAA...GTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGGTTCCAAAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
3UTR CAA 72 bp AGAAAGCTATTCAGTGAGACAGCAGGTGCCCAAGTATaGCTGAGGCTACAGAAGACTTTAGGCTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RKLFSETAGAQV*LRLQKTLGWSS
Trigger: TGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACTTGGGCACCTGCTGTCTCACTGAATAGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 72 bp GTCTGGATAGTAGTATTCGAAGTTAACGGTGCCAGATaGCTTCAGGTTGACGGCGTACATCAGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VWIVVFEVNGAR*LQVDGVHQCGC
Trigger: ACAGCCACACTGATGTACGCCGTCAACCTGAAGCAATCTGGCACCGTTAACTTCGAATACTACTATCCAGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR TCA 90 bp TGTGTAAATGTGATCACCAGCCACCTCCCAGCCTGTCATGCCCTTGTACTCGAAGATCTTCCCAAAGAGTaGCTTCTTGCTGGTAAAGAT +
Preference number: 4 (lower is better)
Translates to: CVNVITSHLPACHALVLEDLPKE*LLAGKD
Trigger: ATCTTTACCAGCAAGAAGTCACTCTTTGGGAAGATC...TTCGAGTACAAGGGCATGACAGGCTGGGAGGTGGCTGGTGATCACATTTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp ATAAGAATTATGAGCAGACGAAGCTATGGCTCTGGCGGATGGGCCATTTTGGGAGGTGTACTTCCTGCTTaGCTCATGAAAAGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: IRIMSRRSYGSGGWAILGGVLPA*LMKSGP
Trigger: AGGACCACTTTTCATGAGGCAAGCAGGAAGTACACC...TCCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTCATAATTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp TACAGGTGCCTGCAGAGATGCCCACTTTCAGCCAGAAATCTATGGTTTTGCAGAGGTGTACTTCCTGCTTaGCTCATGAAAAGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: YRCLQRCPLSARNLWFCRGVLPA*LMKSGP
Trigger: AGGACCACTTTTCATGAGGCAAGCAGGAAGTACACC...TCTGCAAAACCATAGATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp TGTGGAATTCCCATCCTTTCTCTGTGGTCTTCATCCACCTGGAGTCATCTGCATTTGATCTCCCAGAACTaGAGGACTGGGTCACATCAT +
Preference number: 4 (lower is better)
Translates to: CGIPILSLWSSSTWSHLHLISQN*RTGSHH
Trigger: ATGATGTGACCCAGTCCTGCAGTTCTGGGAGATCAA...ATGCAGATGACTCCAGGTGGATGAAGACCACAGAGAAAGGATGGGAATTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp AGCAAGAGTGACAGTGTTTGCCAAAGCGGAGAAGTTGTAGTTGAAAGTCCTGGTGTGGAAAAGTTCAGCTaGGGAGGTGATTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: SKSDSVCQSGEVVVESPGVEKFS*GGDSIQ
Trigger: CTGGATGGAATCACCTCCCCAGCTGAACTTTTCCAC...ACCAGGACTTTCAACTACAACTTCTCCGCTTTGGCAAACACTGTCACTCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CCA 90 bp GTCACTTGCAAATGCCATCCCCTTTCTATATCTACCATCTGGTCACCAAATGGTAGAGATTTCCAGCAGTaGGTGTTGCAGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: VTCKCHPLSISTIWSPNGRDFQQ*VLQDAG
Trigger: GCCAGCATCCTGCAACACCCACTGCTGGAAATCTCT...ACCATTTGGTGACCAGATGGTAGATATAGAAAGGGGATGGCATTTGCAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp TTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTTTACAAACAAAGTGTaGGTATATTTGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LQDAGTQIAAGLQRCYARFTNKV*VYLAGL
Trigger: CAAACCTGCCAAATATACCCACACTTTGTTTGTAAA...CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp CTGCTTGAATACACCACAATCTTCATTTGTATTCCCAGCCAAATACAGATGATGGTCACCCAGGCTGGATaGAGTGCAGTGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: LLEYTTIFICIPSQIQMMVTQAG*SAVARS
Trigger: AGATCGCGCCACTGCACTCCATCCAGCCTGGGTGAC...CATCATCTGTATTTGGCTGGGAATACAAATGAAGATTGTGGTGTATTCAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp TCCACACTGTGGAATTCCCATCCTTTCTCTGTGGTCTTCATCCACCTGGAGTCAAAGAGTGACAGTGTTTaGCAAAGCGGAGAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: STLWNSHPFSVVFIHLESKSDSV*QSGEVV
Trigger: TACAACTTCTCCGCTTTGGCAAACACTGTCACTCTT...TGACTCCAGGTGGATGAAGACCACAGAGAAAGGATGGGAATTCCACAGTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp AGTCTAAGGGCTGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTGAGACAAGGTGCCTGCAGAGATaGCCACTTTCAGCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SLRAVCGLCHKRKLFSETRCLQR*PLSARN
Trigger: ATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCT...TGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp GGTGCCCAAGTATTGCTGAGGCTACAGAAGACTTTAGGCTGGAGCTCAGGAGCTACTGGGTCACATCATTaGACCTATAAAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: GAQVLLRLQKTLGWSSGATGSHH*TYKRRS
Trigger: TGATCTTCTTTTATAGGTCCAATGATGTGACCCAGT...AGCTCCTGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACTTGGGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCATTCATCACCAGCTTaGAGTACTTGTACTCTAGTT +
Preference number: 4 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNHSSPA*STCTLV
Trigger: AACTAGAGTACAAGTACTCCAAGCTGGTGATGAATG...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAATTTACAAACAAAGTGTaGGTATATTTGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQFTNKV*VYLAGL
Trigger: CAAACCTGCCAAATATACCCACACTTTGTTTGTAAA...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CCA 90 bp AGCAAGAGTGACAGTGTTTGCCAAAGCGGAGAAGTTGTAGTTGAAAGTCCTGGTTTGTCAGGGTCACACTaGTGGCAAGAAGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SKSDSVCQSGEVVVESPGLSGSH*WQEVSP
Trigger: AGGAGAAACTTCTTGCCACCAGTGTGACCCTGACAA...ACCAGGACTTTCAACTACAACTTCTCCGCTTTGGCAAACACTGTCACTCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp CTGCTTGAATACACCACAATCTTCATTTGTATTCCCAGCCAAATACAGATGATGGGATGGCAGTACAGGTaGCTGCAGAGATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: LLEYTTIFICIPSQIQMMGWQYR*LQRCPL
Trigger: AAGTGGGCATCTCTGCAGGCACCTGTACTGCCATCC...CATCATCTGTATTTGGCTGGGAATACAAATGAAGATTGTGGTGTATTCAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp AGTCTAAGGGCTGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTGAGACAGGCAGACTAGTCACTTaGAAATGCCATCCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLRAVCGLCHKRKLFSETGRLVT*KCHPLS
Trigger: AGAAAGGGGATGGCATTTGCAAGTGACTAGTCTGCC...TGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp CTGCTTGAATACACCACAATCTTCATTTGTATTCCCAGCCAAATACAGATGATGTTAGTGGGGCAGGAGTaGCAGGTTCCTGAATCTCGG +
Preference number: 4 (lower is better)
Translates to: LLEYTTIFICIPSQIQMMLVGQE*QVPESR
Trigger: CCGAGATTCAGGAACCTGCCACTCCTGCCCCACTAA...CATCATCTGTATTTGGCTGGGAATACAAATGAAGATTGTGGTGTATTCAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 72 bp GTGAAAATCTTGTTAAACTCTCCTAGCCTTCCTTCCTaGAAGACTGGTTTGATTCTGGTGCTGGCGTATGGG +
Preference number: 4 (lower is better)
Translates to: VKILLNSPSLPS*KTGLILVLAYG
Trigger: CCCATACGCCAGCACCAGAATCAAACCAGTCTTCAAGGAAGGAAGGCTAGGAGAGTTTAACAAGATTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 72 bp ATGGTGACAGGAGCTGGCTGCTTGGAGGTAAATGATTaGATCTTCCCAAAGAGTGACTTCTTGCTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: MVTGAGCLEVND*IFPKSDFLLVK
Trigger: CTTTACCAGCAAGAAGTCACTCTTTGGGAAGATCAAATCATTTACCTCCAAGCAGCCAGCTCCTGTCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR GCA 90 bp AGACTACCATTTTCACTCCCTTTGAGCTGGTTATCCAGGGGAAATGGATCCAGGAATAGAGGACATTATTaGCTCGATTTAGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: RLPFSLPLSWLSRGNGSRNRGHY*LDLAPH
Trigger: GTGTGGAGCTAAATCGAGGCAATAATGTCCTCTATT...CCTGGATCCATTTCCCCTGGATAACCAGCTCAAAGGGAGTGAAAATGGTAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR TCA 90 bp GTCACTTGCAAATGCCATCCCCTTTCTATATCTACCATCTGGTCACCAAATGGTGATCTTCCCAAAGAGTaGCTTCTTGCTGGTAAAGAT +
Preference number: 4 (lower is better)
Translates to: VTCKCHPLSISTIWSPNGDLPKE*LLAGKD
Trigger: ATCTTTACCAGCAAGAAGTCACTCTTTGGGAAGATC...ACCATTTGGTGACCAGATGGTAGATATAGAAAGGGGATGGCATTTGCAAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp GTCACTTGCAAATGCCATCCCCTTTCTATATCTACCATCTGGTCACCAAATGGTGAAATGGATCCAGGCTaGTATGAAGATTATCCACCA +
Preference number: 4 (lower is better)
Translates to: VTCKCHPLSISTIWSPNGEMDPG*YEDYPP
Trigger: TGGTGGATAATCTTCATAGCAGCCTGGATCCATTTC...ACCATTTGGTGACCAGATGGTAGATATAGAAAGGGGATGGCATTTGCAAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp CTGCTTGAATACACCACAATCTTCATTTGTATTCCCAGCCAAATACAGATGATGCAGAAGACTTTAGGCTaGAGCTCAGGAGCTGCGTAT +
Preference number: 4 (lower is better)
Translates to: LLEYTTIFICIPSQIQMMQKTLG*SSGAAY
Trigger: ATACGCAGCTCCTGAGCTCCAGCCTAAAGTCTTCTG...CATCATCTGTATTTGGCTGGGAATACAAATGAAGATTGTGGTGTATTCAAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 72 bp GCTAATCAGATGAGCATTTTGTGGCAGACTAGTCACTaGCAAATGCCATCCCCTTTCTATATCTACCATCTG +
Preference number: 4 (lower is better)
Translates to: ANQMSILWQTSH*QMPSPFYIYHL
Trigger: CAGATGGTAGATATAGAAAGGGGATGGCATTTGCAAGTGACTAGTCTGCCACAAAATGCTCATCTGATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
3UTR CAA 72 bp GTGTTTGCTCTCAAGTGGGCGGACAACTCTGTGAGTTaGCTGAAAACCATTGAATCGTATGTTTTAAAGGTG +
Preference number: 4 (lower is better)
Translates to: VFALKWADNSVS*LKTIESYVLKV
Trigger: CACCTTTAAAACATACGATTCAATGGTTTTCAGCAAACTCACAGAGTTGTCCGCCCACTTGAGAGCAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR GCA 90 bp AAACTCCCAGCTGTTTCTGCCCTTAAGTTAGAGGACAGAGGAAATAGTTTCTATAAGAGTGACAGTGTTTaGCAAAGCGGAGAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: KLPAVSALKLEDRGNSFYKSDSV*QSGEVV
Trigger: TACAACTTCTCCGCTTTGGCAAACACTGTCACTCTT...ATAGAAACTATTTCCTCTGTCCTCTAACTTAAGGGCAGAAACAGCTGGGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp AAACTCCCAGCTGTTTCTGCCCTTAAGTTAGAGGACAGAGGAAATAGTTTCTATCAGATGAGCATTTTGTaGCAGACTAGTCACTTGCAA +
Preference number: 4 (lower is better)
Translates to: KLPAVSALKLEDRGNSFYQMSIL*QTSHLQ
Trigger: TTGCAAGTGACTAGTCTGCCACAAAATGCTCATCTG...ATAGAAACTATTTCCTCTGTCCTCTAACTTAAGGGCAGAAACAGCTGGGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CCA 90 bp CTGCTTGAATACACCACAATCTTCATTTGTATTCCCAGCCAAATACAGATGATGTATTTGAATAAGAGTTaGCTGGGCAAAGTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLEYTTIFICIPSQIQMMYLNKS*LGKVCR
Trigger: TCTGCAAACTTTGCCCAGCCAACTCTTATTCAAATA...CATCATCTGTATTTGGCTGGGAATACAAATGAAGATTGTGGTGTATTCAAGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS CCA 90 bp TTCTGCGGGTCGCCATGGCAGCCGCCGCCGCTGGTGCGCGCGGCGTaGGCGCGGGAGAGCGCGCGCCCGGGGTGCGCAACCGGCCCAACA +
Preference number: 5 (lower is better)
Translates to: FCGSPWQPPPLVRAA*ARESARPGCATGPT
Trigger: TGTTGGGCCGGTTGCGCACCCCGGGCGCGCGCTCTCCCGCGCCCACGCCGCGCGCACCAGCGGCGGCGGCTGCCATGGCGACCCGCAGAA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533147.5
CDS TCA 90 bp GGCAGTAGCGGCTCAGGTGCTGCGGCTGCTGCTTCCACGTCGCCTTaGCAACCGCCTCCTCTCTGGCTCCGCGCGGGTGGGGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: GSSGSGAAAAASTSP*QPPPLWLRAGGAGT
Trigger: GGTCCCTGCCCCACCCGCGCGGAGCCAGAGAGGAGGCGGTTGTCAAGGCGACGTGGAAGCAGCAGCCGCAGCACCTGAGCCGCTACTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531664.5
CDS TCA 90 bp GCGGAGAGATGGTGGCTGTGCCCAGGCTCAGCCATAGCGTTGTCCTaGGTGAGCGGCAGTAGCGGCTCAGGTGCTGCGGCTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: AERWWLCPGSAIALS*VSGSSGSGAAAAAS
Trigger: GGAAGCAGCAGCCGCAGCACCTGAGCCGCTACTGCCGCTCACTCAGGACAACGCTATGGCTGAGCCTGGGCACAGCCACCATCTCTCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531664.5
CDS CCA 90 bp GGCTGGTGCACAGGCCCGGGGTATGCGGCACGGCGACCCTCCACCTaGAACCCGTGCTGTCACACGCCGTGTACTCATAGTGGTACTCAG +
Preference number: 5 (lower is better)
Translates to: GWCTGPGYAARRPST*NPCCHTPCTHSGTQ
Trigger: CTGAGTACCACTATGAGTACACGGCGTGTGACAGCACGGGTTCCAGGTGGAGGGTCGCCGTGCCGCATACCCCGGGCCTGTGCACCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369939.8
ENST00000457623.6
ENST00000526264.5
ENST00000529753.5
ENST00000531664.5
ENST00000533147.5
ENST00000533374.1
ENST00000534476.5
CDS TCA 90 bp GCGGAGAGATGGTGGCTGTGCCCAGGCTCAGCCATAGCGTTGTCCTaGGTGAGCGGCAGTAGCGGCTCAGGTGCTGCGGCTGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: AERWWLCPGSAIALS*VSGSSGSGAAAAAS
Trigger: AGAAGCAGCAGCCGCAGCACCTGAGCCGCTACTGCCGCTCACTCAGGACAACGCTATGGCTGAGCCTGGGCACAGCCACCATCTCTCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000457623.6
ENST00000526264.5
ENST00000533147.5
CDS TCA 90 bp GCGGAGAGATGGTGGCTGTGCCCAGGCTCAGCCATAGCGTTGTCCTaGGTGAGCGGCAGTAGCGGCTCAGGTGCTGCGGCTGCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: AERWWLCPGSAIALS*VSGSSGSGAAAAAC
Trigger: ACAAGCAGCAGCCGCAGCACCTGAGCCGCTACTGCCGCTCACTCAGGACAACGCTATGGCTGAGCCTGGGCACAGCCACCATCTCTCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534476.5
CDS GCA 90 bp ACAGGCCCGGGGTATGCGGCACGGCGACCCTCCACCTGGAACCCGTaGTGTCACACGCCGTGTACTCATAGTGGTACTCAGACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: TGPGYAARRPSTWNP*CHTPCTHSGTQTAG
Trigger: CCCTGCAGTCTGAGTACCACTATGAGTACACGGCGTGTGACAGCACGGGTTCCAGGTGGAGGGTCGCCGTGCCGCATACCCCGGGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533374.1
CDS TCA 90 bp CAGGCCAAGGCAGACACCCGGGCTTTCAGGCAGCAAGCACGGTACTaGCCCAGAAGGCCTTGGCGTGAGCCCAGGGAGGGAAGAGAATGG +
Preference number: 5 (lower is better)
Translates to: QAKADTRAFRQQARY*PRRPWREPREGREW
Trigger: CCATTCTCTTCCCTCCCTGGGCTCACGCCAAGGCCTTCTGGGTCAGTACCGTGCTTGCTGCCTGAAAGCCCGGGTGTCTGCCTTGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS TCA 90 bp GCCCGGGGTGCGCAACCGGCCCAACAGGCAGGCCCGGGGCTCGTGTaGAGAACACAGTGGAAGCATCCTCCAAGCCAGCCAACAAATTTC +
Preference number: 5 (lower is better)
Translates to: ARGAQPAQQAGPGLV*RTQWKHPPSQPTNF
Trigger: GAAATTTGTTGGCTGGCTTGGAGGATGCTTCCACTGTGTTCTTCACACGAGCCCCGGGCCTGCCTGTTGGGCCGGTTGCGCACCCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533147.5
CDS CCA 90 bp ACCCAGGACAGACAAGTGAAGCGGGTGCGATGGCCAGAGGGGAAGTaGGTGCCCATGTGGCTGCCATCCCAGGTGCCATCACGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: TQDRQVKRVRWPEGK*VPMWLPSQVPSRLV
Trigger: CACCAACCGTGATGGCACCTGGGATGGCAGCCACATGGGCACCCACTTCCCCTCTGGCCATCGCACCCGCTTCACTTGTCTGTCCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464345.1
CDS GCA 90 bp ACAGGCCCGGGGTATGCGGCACGGCGACCCTCCACCTGGAACCCGTaGTGTCACACGCCGTGTACTCATAGTGGTACTCAGACTCTTTGC +
Preference number: 5 (lower is better)
Translates to: TGPGYAARRPSTWNP*CHTPCTHSGTQTLC
Trigger: GCAAAGAGTCTGAGTACCACTATGAGTACACGGCGTGTGACAGCACGGGTTCCAGGTGGAGGGTCGCCGTGCCGCATACCCCGGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369939.8
ENST00000457623.6
ENST00000526264.5
ENST00000529753.5
ENST00000531664.5
ENST00000533147.5
ENST00000534476.5
CDS CCA 90 bp TCTGAGCTGGGCCTTGGCTGTGCTGCAAGGCGGGAACACAGGCTTTaGTCTGACCCAGCATCTAAAGGCCCCGGCAGTGGTCAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SELGLGCAARREHRL*SDPASKGPGSGQAK
Trigger: CTTGGCCTGACCACTGCCGGGGCCTTTAGATGCTGGGTCAGACCAAAGCCTGTGTTCCCGCCTTGCAGCACAGCCAAGGCCCAGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS-3UTR CAA 90 bp GGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGGAGCACTCGGTGCCCTaGATGGGGTCAGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GCCRMLAPKSPQACKGAMEHSVP*MGSGRL
Trigger: CAGCCTGCCTGACCCCATCAAGGGCACCGAGTGCTC...CATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR CAA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGAAACTCCCCGGCGTaGCAGGAGAAGGAGCACTCG +
Preference number: 5 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGRNSPA*QEKEHS
Trigger: CGAGTGCTCCTTCTCCTGCAACGCCGGGGAGTTTCT...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS CCA 90 bp CAAGTGAAGCGGGTGCGATGGCCAGAGGGGAAGTGGGTGCCCATGTaGCTGCCATCCCAGGTGCCATCACGGTTGGTGAGACCCTTGTTA +
Preference number: 5 (lower is better)
Translates to: QVKRVRWPEGKWVPM*LPSQVPSRLVRPLL
Trigger: TAACAAGGGTCTCACCAACCGTGATGGCACCTGGGATGGCAGCCACATGGGCACCCACTTCCCCTCTGGCCATCGCACCCGCTTCACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464345.1
CDS-3UTR CAA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCCGGTCGTTTCCATGTTaGTGGGCAGCGTGTTCCACC +
Preference number: 5 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGRSFPC*WAACST
Trigger: GGTGGAACACGCTGCCCACAAACATGGAAACGACCG...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCAGAAACTCCCCGGCGTaGCAGGAGAAGGAGCACTCG +
Preference number: 5 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCRNSPA*QEKEHS
Trigger: CGAGTGCTCCTTCTCCTGCAACGCCGGGGAGTTTCT...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR CAA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCGTCCTGGTCGGAGTGTaGCGTGAGAAGGTGCAATCG +
Preference number: 5 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCVLVGV*REKVQS
Trigger: CGATTGCACCTTCTCACGCAACACTCCGACCAGGAC...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTTTCCAGCAGTGGGTGTaGCAGGATGCTGGCACCCAA +
Preference number: 5 (lower is better)
Translates to: PQACKGAMQGEEAGEAGSFQQWV*QDAGTQ
Trigger: TTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAA...ACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
CDS-3UTR CAA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGTTTCTTACCCAGGCCTaGCTCCCCTTGCCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVFLTQA*LPLPSD
Trigger: GTCTGAGGGCAAGGGGAGCAAGGCCTGGGTAAGAAA...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp ATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCGAGCACTCGGTGCCCTaGATGGGGTCAGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: MKRFPAVGVAGCWHPNRREHSVP*MGSGRL
Trigger: CAGCCTGCCTGACCCCATCAAGGGCACCGAGTGCTC...GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp CCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTAGAAACTCCCCGGCGTaGCAGGAGAAGGCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: PQACKGAMQGEEAGEAGSRNSPA*QEKALC
Trigger: GCAAAGAGCCTTCTCCTGCAACGCCGGGGAGTTTCT...ACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS CCA 90 bp GAGAGGAGAGTCCTAGGAGCTGGCAAACTGTCTCGGGCCAGCTCTTaGAGCAGCACATTCACTGACCCCAATGGATGGGCCATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: ERRVLGAGKLSRASS*SSTFTDPNGWAILV
Trigger: GACCAGGATGGCCCATCCATTGGGGTCAGTGAATGTGCTGCTCCAAGAGCTGGCCCGAGACAGTTTGCCAGCTCCTAGGACTCTCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS-3UTR CAA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTCGGTCGTTTCCATGTTaGTGGGCAGCGTGTTCCACC +
Preference number: 5 (lower is better)
Translates to: APKSPQACKGAMQGEEAGRSFPC*WAACST
Trigger: GGTGGAACACGCTGCCCACAAACATGGAAACGACCG...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCACAGCCTGTCATGCCCTaGTACTCGAAGTTGATCCCA +
Preference number: 5 (lower is better)
Translates to: RRRLAKVLCKVRRQVRQAQPVMP*YSKLIP
Trigger: TGGGATCAACTTCGAGTACAAGGGCATGACAGGCTG...TGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCGTCTCCACAGGAGTGTaGGTCCTAGAATTCACACCC +
Preference number: 5 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGVSTGV*VLEFTP
Trigger: GGGTGTGAATTCTAGGACCAACACTCCTGTGGAGAC...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTCCTGGTCGGAGTGTaGCGTGAGAAGGTGCAATCG +
Preference number: 5 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQVLVGV*REKVQS
Trigger: CGATTGCACCTTCTCACGCAACACTCCGACCAGGAC...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCCACAGGAAGTGGAAGTaGCAGCCATCACAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCHRKWK*QPSQVP
Trigger: TGGGACCTGTGATGGCTGCAACTTCCACTTCCTGTG...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCCAAATCGCCGCAGGCTaGCAAAGGTGCTATGCAAGG +
Preference number: 5 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCQIAAG*QRCYAR
Trigger: CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTG...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTCTCAGGCCCATGCCATaGTGGGCTGTATCCCCTAAA +
Preference number: 5 (lower is better)
Translates to: PQACKGAMQGEEAGEAGSLRPMP*WAVSPK
Trigger: TTTAGGGGATACAGCCCACAATGGCATGGGCCTGAG...ACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTAATGGGCAATTGGGGCTaGACCAAGGGAAGGTCACCC +
Preference number: 5 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLMGNWG*TKGRSP
Trigger: GGGTGACCTTCCCTTGGTCAAGCCCCAATTGCCCAT...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp CGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCACCAGATTGCTTCAGGTaGACGGCGTACATCAGTGTG +
Preference number: 5 (lower is better)
Translates to: RRRLAKVLCKVRRQVRQAPDCFR*TAYISV
Trigger: CACACTGATGTACGCCGTCAACCTGAAGCAATCTGG...TGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCGTTAACGGTGCCAGATaGCTTCAGGTTGACGGCGTA +
Preference number: 5 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGVNGAR*LQVDGV
Trigger: TACGCCGTCAACCTGAAGCAATCTGGCACCGTTAAC...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGTTGTGTCTCTCCGTaGGCATCGCAGGCCGTGTGT +
Preference number: 5 (lower is better)
Translates to: HPNRRRLAKVLCKVRRQVSCVSP*ASQAVC
Trigger: ACACACGGCCTGCGATGCCAACGGAGAGACACAACT...CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGAGTTGTGTCTCTCCGTaGGCATCGCAGGCCGTGTGT +
Preference number: 5 (lower is better)
Translates to: PKSPQACKGAMQGEEAGESCVSP*ASQAVC
Trigger: ACACACGGCCTGCGATGCCAACGGAGAGACACAACT...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGCCTCCCAGCTCAGAATaGCTCAGTGGGGAACAGCTG +
Preference number: 5 (lower is better)
Translates to: PKSPQACKGAMQGEEAGEPPSSE*LSGEQL
Trigger: CAGCTGTTCCCCACTGAGCAATTCTGAGCTGGGAGG...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527501.1
CDS TCA 90 bp AATGCCTGTGCCGAGGGAGTAGCGGCCCTCAGCGCATGGCTTACATaGCTGGTCCTTCATATCCAGAAACTCCCCGGCGTTGCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: NACAEGVAALSAWLT*LVLHIQKLPGVAGE
Trigger: TTCTCCTGCAACGCCGGGGAGTTTCTGGATATGAAGGACCAGTCATGTAAGCCATGCGCTGAGGGCCGCTACTCCCTCGGCACAGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000369939.8
ENST00000457623.6
ENST00000490758.6
ENST00000526264.5
ENST00000527996.5
ENST00000529753.5
ENST00000531664.5
ENST00000533374.1
ENST00000534476.5
CDS TCA 90 bp CCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACACCCTaGACCCAGGACAGACAAGTGAAGCGGGTGCGATGGCCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: PFHVSTGVLVLEFTP*TQDRQVKRVRWPEG
Trigger: CCCCTCTGGCCATCGCACCCGCTTCACTTGTCTGTCCTGGGTTCAGGGTGTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464345.1
CDS CCA 90 bp GATTCTGGGCCAGGTAAGAGCTCCTCTGGGGTGGGGAACTTTGTGTaGCTCACGGATGTATCCCAAGCACCTAGCCCAGTGCCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: DSGPGKSSSGVGNFV*LTDVSQAPSPVPES
Trigger: TGACTCAGGCACTGGGCTAGGTGCTTGGGATACATCCGTGAGCCACACAAAGTTCCCCACCCCAGAGGAGCTCTTACCTGGCCCAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369936.2
CDS-3UTR CAA 90 bp CGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAATCTTGGCAACGTCATaGGTGTACTTCCTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: RRRLAKVLCKVRRQVRQAILATS*VYFLLA
Trigger: GGCAAGCAGGAAGTACACCAATGACGTTGCCAAGAT...TGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCATGGATCTTGTTGTTCTaGGTCCCTGGACCACAGGGC +
Preference number: 5 (lower is better)
Translates to: LAPKSPQACKGAMQGEEAWILLF*VPGPQG
Trigger: GCCCTGTGGTCCAGGGACCAAGAACAACAAGATCCA...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGGATCTTGTTGTTCTaGGTCCCTGGACCACAGGGC +
Preference number: 5 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLWILLF*VPGPQG
Trigger: GCCCTGTGGTCCAGGGACCAAGAACAACAAGATCCA...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCACACAGAGAGTGGATCTaGTTGTTCTTGGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: RRRLAKVLCKVRRQVRQAHREWI*LFLVPG
Trigger: TCCAGGGACCAAGAACAACAAGATCCACTCTCTGTG...TGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCCGGAGGTCAGTGACATaGTCGGTGCACACAGACATT +
Preference number: 5 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCRRSVT*SVHTDI
Trigger: AATGTCTGTGTGCACCGACAATGTCACTGACCTCCG...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCGGCAGGTCACAGTCCTaGAGAGTAGCATTCATCACC +
Preference number: 5 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCGRSQS*RVAFIT
Trigger: GGTGATGAATGCTACTCTCAAGGACTGTGACCTGCC...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGGCACAAATCGCCGCAGGCTaGCAAAGGTGCTATGCAAGG +
Preference number: 5 (lower is better)
Translates to: AVPLTGPCLGLLRMSSAAQIAAG*QRCYAR
Trigger: CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTG...TGCCGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527501.1
ENST00000527996.5
CDS-3UTR CAA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTACAAATCGCCGCAGGCTaGCAAAGGTGCTATGCAAGG +
Preference number: 5 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLQIAAG*QRCYAR
Trigger: CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTG...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGAAGCAGAAGGATCACTaGAACCCAGGATGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: PNRRRLAKVLCKVRRQVRKQKDH*NPGWGG
Trigger: GCCTCCCCATCCTGGGTTCAAGTGATCCTTCTGCTT...CCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp CCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCTGGAGTCATCTGCATaGGGCTGGCACTGGTCATTC +
Preference number: 5 (lower is better)
Translates to: PNRRRLAKVLCKVRRQVRLESSA*GWHWSF
Trigger: GAATGACCAGTGCCAGCCCAATGCAGATGACTCCAG...CCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGAAAGAGGAGCCCTGCTaGTCTGCATACGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: CWHPNRRRLAKVLCKVRRKEEPC*SAYVPG
Trigger: ACCTGGCACGTATGCAGACAAGCAGGGCTCCTCTTT...CCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCTTGGCTGGGCAAAGTTaGCAGAAAGAGGAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCLAGQS*QKEEPC
Trigger: GCAGGGCTCCTCTTTCTGCAAACTTTGCCCAGCCAA...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCTGTGTCAGCACAGGCTaGGGTACTTTGGTCCATACT +
Preference number: 5 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGCVSTG*GTLVHT
Trigger: AGTATGGACCAAAGTACCCAAGCCTGTGCTGACACA...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529753.5
CDS TCA 90 bp AAGTCTGCAAGGAACAGCTGGGGAATGCATGTTCATGCGCACTCCTaGAAGCACACGCTTCAGTGCTCCTCCTCTGAGCTGGGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: KSARNSWGMHVHAHS*KHTLQCSSSELGLG
Trigger: GCCAAGGCCCAGCTCAGAGGAGGAGCACTGAAGCGTGTGCTTTCAGGAGTGCGCATGAACATGCATTCCCCAGCTGTTCCTTGCAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS CCA 90 bp CCCAGCACCATGGCTACTGATGCTCATCCTCTCAGAAATGGGCCCTaGGACCCCGGGCAGGGAGCTGATGATTATGAACCGAGTACAAGA +
Preference number: 5 (lower is better)
Translates to: PSTMATDAHPLRNGP*DPGQGADDYEPSTR
Trigger: TCTTGTACTCGGTTCATAATCATCAGCTCCCTGCCCGGGGTCCCAGGGCCCATTTCTGAGAGGATGAGCATCAGTAGCCATGGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533374.1
CDS-3UTR CAA 90 bp GGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGTGGCAGGTGCTGTTGTaGGTTTTGAAGAAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GCCRMLAPKSPQACKGAMWQVLL*VLKKPG
Trigger: CCCAGGCTTCTTCAAAACCAACAACAGCACCTGCCA...CATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGGGCTGGCAGGTGCTGTaGTTGGTTTTGAAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: AGCWHPNRRRLAKVLCKVGWQVL*LVLKKP
Trigger: AGGCTTCTTCAAAACCAACAACAGCACCTGCCAGCC...CACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TGGCAGCAGCAAACTTCCAGGGACAGTTTTCTGTGGACTGCACCTGACGCGGATCGGTCGTTTCCATGTTaGTGGGCAGCGTGTTCCACC +
Preference number: 5 (lower is better)
Translates to: WQQQTSRDSFLWTAPDADRSFPC*WAACST
Trigger: GGTGGAACACGCTGCCCACAAACATGGAAACGACCG...ATCCGCGTCAGGTGCAGTCCACAGAAAACTGTCCCTGGAAGTTTGCTGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CAA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGCCCTTGTACTCGAAGTaGATCCCACTGAGAACGGTC +
Preference number: 5 (lower is better)
Translates to: PKSPQACKGAMQGEEAGEPLYSK*IPLRTV
Trigger: GACCGTTCTCAGTGGGATCAACTTCGAGTACAAGGG...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGCAGCCTGTCATGCCCTaGTACTCGAAGTTGATCCCA +
Preference number: 5 (lower is better)
Translates to: PKSPQACKGAMQGEEAGEQPVMP*YSKLIP
Trigger: TGGGATCAACTTCGAGTACAAGGGCATGACAGGCTG...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGGTCTCCACAGGAGTGTaGGTCCTAGAATTCACACCC +
Preference number: 5 (lower is better)
Translates to: GCWHPNRRRLAKVLCKVRVSTGV*VLEFTP
Trigger: GGGTGTGAATTCTAGGACCAACACTCCTGTGGAGAC...CCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTAGTCTCCACAGGAGTGTaGGTCCTAGAATTCACACCC +
Preference number: 5 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLVSTGV*VLEFTP
Trigger: GGGTGTGAATTCTAGGACCAACACTCCTGTGGAGAC...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTCGGAGGTCAGTGACATaGTCGGTGCACACAGACATT +
Preference number: 5 (lower is better)
Translates to: APKSPQACKGAMQGEEAGRRSVT*SVHTDI
Trigger: AATGTCTGTGTGCACCGACAATGTCACTGACCTCCG...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTCACAGGAAGTGGAAGTaGCAGCCATCACAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGHRKWK*QPSQVP
Trigger: TGGGACCTGTGATGGCTGCAACTTCCACTTCCTGTG...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGCACAGGAAGTGGAAGTaGCAGCCATCACAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: RMLAPKSPQACKGAMQGEHRKWK*QPSQVP
Trigger: TGGGACCTGTGATGGCTGCAACTTCCACTTCCTGTG...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTGGCAGGTCACAGTCCTaGAGAGTAGCATTCATCACC +
Preference number: 5 (lower is better)
Translates to: SGCCRMLAPKSPQACKGAGRSQS*RVAFIT
Trigger: GGTGATGAATGCTACTCTCAAGGACTGTGACCTGCC...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGCAGGTCACAGTCCTaGAGAGTAGCATTCATCACC +
Preference number: 5 (lower is better)
Translates to: LAPKSPQACKGAMQGEEAGRSQS*RVAFIT
Trigger: GGTGATGAATGCTACTCTCAAGGACTGTGACCTGCC...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp ATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCTTCCAGCAGTGGGTGTaGCAGGATGCTGGCACCCAA +
Preference number: 5 (lower is better)
Translates to: MKRFPAVGVAGCWHPNRRFQQWV*QDAGTQ
Trigger: TTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAA...GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
CDS-3UTR CAA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCGCAGGTGCCCAAGTATaGCTGAGGCTACAGAAGACT +
Preference number: 5 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCAGAQV*LRLQKT
Trigger: AGTCTTCTGTAGCCTCAGCAATACTTGGGCACCTGC...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp AAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCACTGGAGTCATCTGCATaGGGCTGGCACTGGTCATTC +
Preference number: 5 (lower is better)
Translates to: KSPQACKGAMQGEEAGEALESSA*GWHWSF
Trigger: GAATGACCAGTGCCAGCCCAATGCAGATGACTCCAG...TGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCACTCACCAGCACAGGCTaGGGTACTTTGGTCCATACT +
Preference number: 5 (lower is better)
Translates to: LAPKSPQACKGAMQGEEALTSTG*GTLVHT
Trigger: AGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGAG...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp GTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGTTGGCTGGGCAAAGTTaGCAGAAAGAGGAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: VAGCWHPNRRRLAKVLCKLAGQS*QKEEPC
Trigger: GCAGGGCTCCTCTTTCTGCAAACTTTGCCCAGCCAA...CTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCTTCGGCTTGGCCCATTaGTACATGAGTTGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGFGLAH*YMSCVS
Trigger: AGAGACACAACTCATGTACAAATGGGCCAAGCCGAA...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS TCA 90 bp GCCATCCCAGGTGCCATCACGGTTGGTGAGACCCTTGTTAAACTGTaGAGTCCCTGCTGGTCAGTCTGGGCCTTTCCTCTGTGGAATCAC +
Preference number: 5 (lower is better)
Translates to: AIPGAITVGETLVKL*SPCWSVWAFPLWNH
Trigger: GTGATTCCACAGAGGAAAGGCCCAGACTGACCAGCAGGGACTTCACAGTTTAACAAGGGTCTCACCAACCGTGATGGCACCTGGGATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464345.1
CDS-3UTR CAA 90 bp TTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGGCAGGTGCTGTTGTaGGTTTTGAAGAAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: LQDAGTQIAAGLQRCYARWQVLL*VLKKPG
Trigger: CCCAGGCTTCTTCAAAACCAACAACAGCACCTGCCA...CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGAGAATCATGAAGTCATaGTCTGAGGCTCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVRIMKS*SEAPAA
Trigger: AGCTGCTGGAGCCTCAGACAATGACTTCATGATTCT...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGTGGTGTACTTCCTGCTaGCCTCATGAAAAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: AGCWHPNRRRLAKVLCKVWCTSC*PHEKWS
Trigger: GGACCACTTTTCATGAGGCAAGCAGGAAGTACACCA...CACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGATCTTGGCAACGTCATaGGTGTACTTCCTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: CWHPNRRRLAKVLCKVRRILATS*VYFLLA
Trigger: GGCAAGCAGGAAGTACACCAATGACGTTGCCAAGAT...CCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCATCTTGGCAACGTCATaGGTGTACTTCCTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCILATS*VYFLLA
Trigger: GGCAAGCAGGAAGTACACCAATGACGTTGCCAAGAT...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGAGAGAGTGGATCTTGTaGTTCTTGGTCCCTGGACCA +
Preference number: 5 (lower is better)
Translates to: PNRRRLAKVLCKVRRQVRREWIL*FLVPGP
Trigger: TGGTCCAGGGACCAAGAACAACAAGATCCACTCTCT...CCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGAGAGAGTGGATCTTGTaGTTCTTGGTCCCTGGACCA +
Preference number: 5 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQREWIL*FLVPGP
Trigger: TGGTCCAGGGACCAAGAACAACAAGATCCACTCTCT...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCACACAGAGAGTGGATCTaGTTGTTCTTGGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: LAPKSPQACKGAMQGEEAHREWI*LFLVPG
Trigger: TCCAGGGACCAAGAACAACAAGATCCACTCTCTGTG...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCAAGTATTTCAGCCCTTaGGAAGTGAAGCTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCKYFSP*EVKLGP
Trigger: AGGGCCAAGCTTCACTTCCAAAGGGCTGAAATACTT...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCGCATTCATCACCAGCTaGGAGTACTTGTACTCTAGT +
Preference number: 5 (lower is better)
Translates to: SPQACKGAMQGEEAGEAGAFITS*EYLYSS
Trigger: ACTAGAGTACAAGTACTCCAAGCTGGTGATGAATGC...GCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGCCAAAGAGTGACTTCTaGCTGGTAAAGATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVPKSDF*LVKMRS
Trigger: CGACCTCATCTTTACCAGCAAGAAGTCACTCTTTGG...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTCTGGAACATCTGGGTTaGGGGCTTACCTGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: APKSPQACKGAMQGEEAGLEHLG*GLTWFF
Trigger: AAAGAACCAGGTAAGCCCCAAACCCAGATGTTCCAG...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp GCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTTGGCAGACTAGTCACTaGCAAATGCCATCCCCTTTC +
Preference number: 5 (lower is better)
Translates to: APKSPQACKGAMQGEEAGWQTSH*QMPSPF
Trigger: GAAAGGGGATGGCATTTGCAAGTGACTAGTCTGCCA...ACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTCCAGATTGCTTCAGGTaGACGGCGTACATCAGTGTG +
Preference number: 5 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGPDCFR*TAYISV
Trigger: CACACTGATGTACGCCGTCAACCTGAAGCAATCTGG...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGCCAGATTGCTTCAGGTaGACGGCGTACATCAGTGTG +
Preference number: 5 (lower is better)
Translates to: VAGCWHPNRRRLAKVLCKPDCFR*TAYISV
Trigger: CACACTGATGTACGCCGTCAACCTGAAGCAATCTGG...CTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp AAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGTTAACGGTGCCAGATaGCTTCAGGTTGACGGCGTA +
Preference number: 5 (lower is better)
Translates to: KSPQACKGAMQGEEAGEAVNGAR*LQVDGV
Trigger: TACGCCGTCAACCTGAAGCAATCTGGCACCGTTAAC...TGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGTTAACGGTGCCAGATaGCTTCAGGTTGACGGCGTA +
Preference number: 5 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGVNGAR*LQVDGV
Trigger: TACGCCGTCAACCTGAAGCAATCTGGCACCGTTAAC...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CAGGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCGACAGGCTTGGGTACTTaGGTCCATACTGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: QAVPLTGPCLGLLRMSSATGLGT*VHTEKA
Trigger: AGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGT...CGCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CAA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCACAGGCTTGGGTACTTaGGTCCATACTGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCTGLGT*VHTEKA
Trigger: AGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGT...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGCTCACCAGCACAGGCTaGGGTACTTTGGTCCATACT +
Preference number: 5 (lower is better)
Translates to: LQDAGTQIAAGLQRCYARLTSTG*GTLVHT
Trigger: AGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGAG...CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAAAAGAGGAGCCCTGCTaGTCTGCATACGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQKEEPC*SAYVPG
Trigger: ACCTGGCACGTATGCAGACAAGCAGGGCTCCTCTTT...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp CAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGCCATTTGTACATGAGTaGTGTCTCTCCGTTGGCATC +
Preference number: 5 (lower is better)
Translates to: QQWVLQDAGTQIAAGLQRPFVHE*CLSVGI
Trigger: GATGCCAACGGAGAGACACAACTCATGTACAAATGG...CCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp TGTCTGCATACGTGCCAGGTTTGCAGGGGAAGCATTCTGAAGTGTAGGCCACCCCCCTTGTACTCGAAGTaGATCCCACTGAGAACGGTC +
Preference number: 5 (lower is better)
Translates to: CLHTCQVCRGSILKCRPPPLYSK*IPLRTV
Trigger: GACCGTTCTCAGTGGGATCAACTTCGAGTACAAGGG...GGGTGGCCTACACTTCAGAATGCTTCCCCTGCAAACCTGGCACGTATGCAGACA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CAA 90 bp CCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGAGAATCATGAAGTCATaGTCTGAGGCTCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PNRRRLAKVLCKVRRQVRRIMKS*SEAPAA
Trigger: AGCTGCTGGAGCCTCAGACAATGACTTCATGATTCT...CCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGAGAGAGTGGATCTTGTaGTTCTTGGTCCCTGGACCA +
Preference number: 5 (lower is better)
Translates to: MLAPKSPQACKGAMQGEEREWIL*FLVPGP
Trigger: TGGTCCAGGGACCAAGAACAACAAGATCCACTCTCT...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp AAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCACACAGAGAGTGGATCTaGTTGTTCTTGGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: KSPQACKGAMQGEEAGEAHREWI*LFLVPG
Trigger: TCCAGGGACCAAGAACAACAAGATCCACTCTCTGTG...TGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGCCAAAGAGTGACTTCTaGCTGGTAAAGATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: WHPNRRRLAKVLCKVRRQPKSDF*LVKMRS
Trigger: CGACCTCATCTTTACCAGCAAGAAGTCACTCTTTGG...CTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GCAGGCAGTGCCTCTCACAGGTCCATGTCTAGGCCTCCTGAGGATGTCTTCAGCCCAAAGAGTGACTTCTaGCTGGTAAAGATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: AGSASHRSMSRPPEDVFSPKSDF*LVKMRS
Trigger: CGACCTCATCTTTACCAGCAAGAAGTCACTCTTTGG...GCTGAAGACATCCTCAGGAGGCCTAGACATGGACCTGTGAGAGGCACTGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527501.1
ENST00000527996.5
CDS-3UTR CAA 90 bp GGCAGGAGTGGCAGGTTCCTGAATCTCGGTCAATATAGTAACCAGCAGGACAAGTTCCAGCAGTGGGTGTaGCAGGATGCTGGCACCCAA +
Preference number: 5 (lower is better)
Translates to: GRSGRFLNLGQYSNQQDKFQQWV*QDAGTQ
Trigger: TTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAA...CTTGTCCTGCTGGTTACTATATTGACCGAGATTCAGGAACCTGCCACTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CAA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCAAAGTGTGGGTATATTaGGCAGGTTTGAGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCKVWVY*AGLRQA
Trigger: TGCTTGCCTCAAACCTGCCAAATATACCCACACTTT...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp GCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGTCCTTGAAGACTGGTTaGATTCTGGTGCTGGCGTAT +
Preference number: 5 (lower is better)
Translates to: AGCWHPNRRRLAKVLCKVSLKTG*ILVLAY
Trigger: ATACGCCAGCACCAGAATCAAACCAGTCTTCAAGGA...CACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTTTCGGCTTGGCCCATTaGTACATGAGTTGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: SGCCRMLAPKSPQACKGAFGLAH*YMSCVS
Trigger: AGAGACACAACTCATGTACAAATGGGCCAAGCCGAA...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp ATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGCCATTTGTACATGAGTaGTGTCAGCACAGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: MLAPKSPQACKGAMQGEEPFVHE*CQHRLG
Trigger: CCCAAGCCTGTGCTGACACAACTCATGTACAAATGG...CTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529753.5
CDS-3UTR CAA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCCTACAGATTTTCGGCTaGGCCCATTTGTACATGAGT +
Preference number: 5 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCLQIFG*AHLYMS
Trigger: ACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAG...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTAGCGTGTTCCACCATTaGTATTCAAATCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: SGCCRMLAPKSPQACKGASVFHH*YSNPTA
Trigger: TGCTGTGGGATTTGAATACAAATGGTGGAACACGCT...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp AGAGACCCCTGTTCCATAATATGGCCCAAACTTCTAGGACGGGGGCACTCAAGGCAGCCTGTCATGCCCTaGTACTCGAAGTTGATCCCA +
Preference number: 5 (lower is better)
Translates to: RDPCSIIWPKLLGRGHSRQPVMP*YSKLIP
Trigger: TGGGATCAACTTCGAGTACAAGGGCATGACAGGCTG...CCTTGAGTGCCCCCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGGGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp TGGCAGCAGCAAACTTCCAGGGACAGTTTTCTGTGGACTGCACCTGACGCGGATTGGTGTACTTCCTGCTaGCCTCATGAAAAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: WQQQTSRDSFLWTAPDADWCTSC*PHEKWS
Trigger: GGACCACTTTTCATGAGGCAAGCAGGAAGTACACCA...ATCCGCGTCAGGTGCAGTCCACAGAAAACTGTCCCTGGAAGTTTGCTGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CAA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAATGGTGTACTTCCTGCTaGCCTCATGAAAAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQWCTSC*PHEKWS
Trigger: GGACCACTTTTCATGAGGCAAGCAGGAAGTACACCA...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAAGTATTTCAGCCCTTaGGAAGTGAAGCTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: VLQDAGTQIAAGLQRCYAKYFSP*EVKLGP
Trigger: AGGGCCAAGCTTCACTTCCAAAGGGCTGAAATACTT...TGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCATTCATCACCAGCTaGGAGTACTTGTACTCTAGT +
Preference number: 5 (lower is better)
Translates to: PKSPQACKGAMQGEEAGEAFITS*EYLYSS
Trigger: ACTAGAGTACAAGTACTCCAAGCTGGTGATGAATGC...CTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGCATTCATCACCAGCTaGGAGTACTTGTACTCTAGT +
Preference number: 5 (lower is better)
Translates to: LAPKSPQACKGAMQGEEAAFITS*EYLYSS
Trigger: ACTAGAGTACAAGTACTCCAAGCTGGTGATGAATGC...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTCCAAAGAGTGACTTCTaGCTGGTAAAGATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGPKSDF*LVKMRS
Trigger: CGACCTCATCTTTACCAGCAAGAAGTCACTCTTTGG...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp AATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGCCATCAGGAGTCCTCTaGGAGGTAAATGATTTGATC +
Preference number: 5 (lower is better)
Translates to: NRRRLAKVLCKVRRQVRQPSGVL*EVNDLI
Trigger: GATCAAATCATTTACCTCCAAGAGGACTCCTGATGG...CTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR CAA 90 bp CACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGCCATCAGGAGTCCTCTaGGAGGTAAATGATTTGATC +
Preference number: 5 (lower is better)
Translates to: HPNRRRLAKVLCKVRRQVPSGVL*EVNDLI
Trigger: GATCAAATCATTTACCTCCAAGAGGACTCCTGATGG...CACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000529753.5
CDS-3UTR CAA 90 bp GATGTCTTCAGCGGCACTGAGTCAAATCCATCAGGAGTCCTCCACCCACACAAACAAATCGCCGCAGGCTaGCAAAGGTGCTATGCAAGG +
Preference number: 5 (lower is better)
Translates to: DVFSGTESNPSGVLHPHKQIAAG*QRCYAR
Trigger: CCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTG...TTTGTGTGGGTGGAGGACTCCTGATGGATTTGACTCAGTGCCGCTGAAGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527501.1
CDS-3UTR CAA 90 bp ATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCTGCCCCATTAAAATCTaGGCCTCCTTGTGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: ISSSGCCRMLAPKSPQACCPIKI*ASLCSF
Trigger: AAAAGAGCACAAGGAGGCCAAGATTTTAATGGGGCA...GCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp AGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTGGCCCAGTGAAAATCTaGTTAAACTCTCCTAGCCTT +
Preference number: 5 (lower is better)
Translates to: SGCCRMLAPKSPQACKGAGPVKI*LNSPSL
Trigger: AAGGCTAGGAGAGTTTAACAAGATTTTCACTGGGCC...AGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp GGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCTTTCAGAAGGGATGTaGCCAGAAATTGGACCAGAA +
Preference number: 5 (lower is better)
Translates to: GCCRMLAPKSPQACKGAMLSEGM*PEIGPE
Trigger: TTCTGGTCCAATTTCTGGCAACATCCCTTCTGAAAG...CATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAATTGAACATGTGTTaGCTCTCAAGTGGGCGGACA +
Preference number: 5 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCKLNMC*LSSGRT
Trigger: TGTCCGCCCACTTGAGAGCAAACACATGTTCAATTT...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp AGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGCCATTTGTACATGAGTaGTGTCTCTCCGTTGGCATC +
Preference number: 5 (lower is better)
Translates to: RMLAPKSPQACKGAMQGEPFVHE*CLSVGI
Trigger: GATGCCAACGGAGAGACACAACTCATGTACAAATGG...CTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTCTACAGATTTTCGGCTaGGCCCATTTGTACATGAGT +
Preference number: 5 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGLQIFG*AHLYMS
Trigger: ACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAG...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369939.8
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATGGCTGGCAGGTGCTGTaGTTGGTTTTGAAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNGWQVL*LVLKKP
Trigger: AGGCTTCTTCAAAACCAACAACAGCACCTGCCAGCC...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp TGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGCATTCATCACCAGCTaGGAGTACTTGTACTCTAGT +
Preference number: 5 (lower is better)
Translates to: CRMLAPKSPQACKGAMQGAFITS*EYLYSS
Trigger: ACTAGAGTACAAGTACTCCAAGCTGGTGATGAATGC...ACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGGCAGTGTTGGAGGTAAATGATTaGATCTTCCCAAAGAGTGAC +
Preference number: 5 (lower is better)
Translates to: RRLAKVLCKVRRQVRQAVLEVND*IFPKSD
Trigger: GTCACTCTTTGGGAAGATCAAATCATTTACCTCCAA...CACTGCCTGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp CAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTTGGAGGTAAATGATTaGATCTTCCCAAAGAGTGAC +
Preference number: 5 (lower is better)
Translates to: QWVLQDAGTQIAAGLQRCLEVND*IFPKSD
Trigger: GTCACTCTTTGGGAAGATCAAATCATTTACCTCCAA...GCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369939.8
ENST00000527501.1
ENST00000527996.5
ENST00000529753.5
CDS-3UTR CAA 90 bp GCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAATCAGATGAGCATTTaGTGGCAGACTAGTCACTTG +
Preference number: 5 (lower is better)
Translates to: AGCWHPNRRRLAKVLCKVNQMSI*WQTSHL
Trigger: CAAGTGACTAGTCTGCCACAAAATGCTCATCTGATT...CACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp GGTGCCCAAGTATTGCTGAGGCTACAGAAGACTTTAGGCTGGAGCTCAGGAGCTTATGACATGCCTAACTaGCTAGGGGAGCAACAGGTG +
Preference number: 5 (lower is better)
Translates to: GAQVLLRLQKTLGWSSGAYDMPN*LGEQQV
Trigger: CACCTGTTGCTCCCCTAGCAAGTTAGGCATGTCATA...AGCTCCTGAGCTCCAGCCTAAAGTCTTCTGTAGCCTCAGCAATACTTGGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp CAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGCAAAAACCCTACTGCTaGAATACACCACAATCTTCA +
Preference number: 5 (lower is better)
Translates to: QQWVLQDAGTQIAAGLQRQKPYC*NTPQSS
Trigger: TGAAGATTGTGGTGTATTCAAGCAGTAGGGTTTTTG...CCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp ATTCTGAAGTGTAGGCCACCCCTGTTATGGCAATGTTTCTCACCAGCACAGGCTCTGGAGTCATCTGCATaGGGCTGGCACTGGTCATTC +
Preference number: 5 (lower is better)
Translates to: ILKCRPPLLWQCFSPAQALESSA*GWHWSF
Trigger: GAATGACCAGTGCCAGCCCAATGCAGATGACTCCAG...AGCCTGTGCTGGTGAGAAACATTGCCATAACAGGGGTGGCCTACACTTCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS TCA 90 bp TCCCAGCTCAGAATTGCTCAGTGGGGAACAGCTGAGACTGAACTATaGTTCAGCTCCCAAAGGACTGGACCCAGACACCTTGGAGGTAAA +
Preference number: 5 (lower is better)
Translates to: SQLRIAQWGTAETEL*FSSQRTGPRHLGGK
Trigger: TTTACCTCCAAGGTGTCTGGGTCCAGTCCTTTGGGAGCTGAATCATAGTTCAGTCTCAGCTGTTCCCCACTGAGCAATTCTGAGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527501.1
CDS-3UTR CAA 90 bp CCACTGAGAACGGTCGTTTCCATGTTTGTGGGCAGCGTGTTCCACCATTTGTATGGCTGGCAGGTGCTGTaGTTGGTTTTGAAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: PLRTVVSMFVGSVFHHLYGWQVL*LVLKKP
Trigger: AGGCTTCTTCAAAACCAACAACAGCACCTGCCAGCC...ATACAAATGGTGGAACACGCTGCCCACAAACATGGAAACGACCGTTCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CAA 90 bp ATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGCGTGTTCCACCATTaGTATTCAAATCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: MKRFPAVGVAGCWHPNRRSVFHH*YSNPTA
Trigger: TGCTGTGGGATTTGAATACAAATGGTGGAACACGCT...GCGGCGATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp ATAAGAATTATGAGCAGACGAAGCTATGGCTCTGGCGGATGGGCCATTTTGGGATGGATCTTGTTGTTCTaGGTCCCTGGACCACAGGGC +
Preference number: 5 (lower is better)
Translates to: IRIMSRRSYGSGGWAILGWILLF*VPGPQG
Trigger: GCCCTGTGGTCCAGGGACCAAGAACAACAAGATCCA...TCCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTCATAATTCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp AGAGACCCCTGTTCCATAATATGGCCCAAACTTCTAGGACGGGGGCACTCAAGGAAGTATTTCAGCCCTTaGGAAGTGAAGCTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: RDPCSIIWPKLLGRGHSRKYFSP*EVKLGP
Trigger: AGGGCCAAGCTTCACTTCCAAAGGGCTGAAATACTT...CCTTGAGTGCCCCCGTCCTAGAAGTTTGGGCCATATTATGGAACAGGGGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAAAAGTGTGGGTATATTaGGCAGGTTTGAGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQKVWVY*AGLRQA
Trigger: TGCTTGCCTCAAACCTGCCAAATATACCCACACTTT...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTACAAAAACATTCCTTGTaGCCTCTCTTTGTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLQKHSL*PLFVLF
Trigger: GAAAAGCACAAAGAGAGGCAACAAGGAATGTTTTTG...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp GGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCGCTTTGGGCATTTTCTaGATGAACTTATTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: GVAGCWHPNRRRLAKVLCALGIF*MNLFLW
Trigger: CCAAAGGAATAAGTTCATCAAGAAAATGCCCAAAGC...GCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp AAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAGGTGAGGCAGAGAAGTATCCCAGCTaGGTGAACACCTTGTTTATT +
Preference number: 5 (lower is better)
Translates to: KSPQACKGAMQGEEAGEAEKYPS*VNTLFI
Trigger: AATAAACAAGGTGTTCACCAAGCTGGGATACTTCTC...TGCCTCACCTGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp GTGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTACACCACAATCTTCATTaGTATTCCCAGCCAAATACA +
Preference number: 5 (lower is better)
Translates to: VGVAGCWHPNRRRLAKVLHHNLH*YSQPNT
Trigger: TGTATTTGGCTGGGAATACAAATGAAGATTGTGGTG...TAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp CTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGGTGAGGAGGCAAAGTTTCTCCTTTATTaGAATAAGAGTTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LAPKSPQACKGAMQGEEAKFLLY*NKSWLG
Trigger: GCCCAGCCAACTCTTATTCAAATAAAGGAGAAACTT...TGCCTCCTCACCTTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS TCA 90 bp CCTCAAGGTCCTCGCTACAGATTTTCGGCTTGGCCCATTTGTACATaGGTTGTGTCTGGTGTCTCAGAGATGAATGAAACATGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: PQGPRYRFSAWPICT*VVSGVSEMNETWPL
Trigger: CAGGGGCCATGTTTCATTCATCTCTGAGACACCAGACACAACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS-3UTR CAA 90 bp TTTGCCTTTGGAACCTTTCCACGTCTCCACAGGAGTGTTGGTCCTAGAATTCACCGGAGGTCAGTGACATaGTCGGTGCACACAGACATT +
Preference number: 5 (lower is better)
Translates to: FAFGTFPRLHRSVGPRIHRRSVT*SVHTDI
Trigger: AATGTCTGTGTGCACCGACAATGTCACTGACCTCCG...GTGAATTCTAGGACCAACACTCCTGTGGAGACGTGGAAAGGTTCCAAAGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CAA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATCCTAGCCTTCCTTCCTaGAAGACTGGTTTGATTCTG +
Preference number: 5 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNPSLPS*KTGLIL
Trigger: CAGAATCAAACCAGTCTTCAAGGAAGGAAGGCTAGG...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp AGACTACCATTTTCACTCCCTTTGAGCTGGTTATCCAGGGGAAATGGATCCAGGGCATACGTGCCAGGTTaGCAGGGGAAGCATTCTGAA +
Preference number: 5 (lower is better)
Translates to: RLPFSLPLSWLSRGNGSRAYVPG*QGKHSE
Trigger: TTCAGAATGCTTCCCCTGCAAACCTGGCACGTATGC...CCTGGATCCATTTCCCCTGGATAACCAGCTCAAAGGGAGTGAAAATGGTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp TACAGGTGCCTGCAGAGATGCCCACTTTCAGCCAGAAATCTATGGTTTTGCAGAGCATACGTGCCAGGTTaGCAGGGGAAGCATTCTGAA +
Preference number: 5 (lower is better)
Translates to: YRCLQRCPLSARNLWFCRAYVPG*QGKHSE
Trigger: TTCAGAATGCTTCCCCTGCAAACCTGGCACGTATGC...TCTGCAAAACCATAGATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CAA 90 bp TGGGTGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATAAGTTTCTCCTTTATTaGAATAAGAGTTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: WVLQDAGTQIAAGLQRCYKFLLY*NKSWLG
Trigger: GCCCAGCCAACTCTTATTCAAATAAAGGAGAAACTT...ATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS CCA 90 bp GTGTCAGCACAGGCTTGGGTACTTTGGTCCATACTGAGAAGGCTGTaGTTCTCCAATAGAGGACATTATTGCCTCGATTTAGCTCCACAC +
Preference number: 5 (lower is better)
Translates to: VSAQAWVLWSILRRL*FSNRGHYCLDLAPH
Trigger: GTGTGGAGCTAAATCGAGGCAATAATGTCCTCTATTGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529753.5
CDS-3UTR CAA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATAGCGTGTTCCACCATTaGTATTCAAATCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNSVFHH*YSNPTA
Trigger: TGCTGTGGGATTTGAATACAAATGGTGGAACACGCT...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369939.8
ENST00000527996.5
CDS-3UTR CAA 90 bp CACCTCCCAGCCTGTCATGCCCTTGTACTCGAAGTTGATCCCACTGAGAACGGTTTGGAGGTAAATGATTaGATCTTCCCAAAGAGTGAC +
Preference number: 5 (lower is better)
Translates to: HLPACHALVLEVDPTENGLEVND*IFPKSD
Trigger: GTCACTCTTTGGGAAGATCAAATCATTTACCTCCAA...ACCGTTCTCAGTGGGATCAACTTCGAGTACAAGGGCATGACAGGCTGGGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CAA 90 bp AGTCTAAGGGCTGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTGAGACACCCTTGTACTCGAAGTaGATCCCACTGAGAACGGTC +
Preference number: 5 (lower is better)
Translates to: SLRAVCGLCHKRKLFSETPLYSK*IPLRTV
Trigger: GACCGTTCTCAGTGGGATCAACTTCGAGTACAAGGG...TGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp TGTTGCAGGATGCTGGCACCCAAATCGCCGCAGGCTTGCAAAGGTGCTATGCAAGATGAACTTATTCCTTaGGCTTCAGTGAGAATATCT +
Preference number: 5 (lower is better)
Translates to: CCRMLAPKSPQACKGAMQDELIP*ASVRIS
Trigger: AGATATTCTCACTGAAGCCAAAGGAATAAGTTCATC...TTGCATAGCACCTTTGCAAGCCTGCGGCGATTTGGGTGCCAGCATCCTGCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp GCCACAATGAAGAGATTTCCAGCAGTGGGTGTTGCAGGATGCTGGCACCCAAATGATTCAGTTCCTTTTTaGGCCAGCCTAGACGTTTAT +
Preference number: 5 (lower is better)
Translates to: ATMKRFPAVGVAGCWHPNDSVPF*ASLDVY
Trigger: ATAAACGTCTAGGCTGGCCAAAAAAGGAACTGAATC...ATTTGGGTGCCAGCATCCTGCAACACCCACTGCTGGAAATCTCTTCATTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS TCA 90 bp GTGGCCCTCAGATCGAGTCACAGACAAAAACGTGCCCTTATAGGTTaGACTGAGGGGTTGATGAACATGATCTGTGCAGATACCATACAT +
Preference number: 5 (lower is better)
Translates to: VALRSSHRQKRALIG*TEGLMNMICADTIH
Trigger: ATGTATGGTATCTGCACAGATCATGTTCATCAACCCCTCAGTTCAACCTATAAGGGCACGTTTTTGTCTGTGACTCGATCTGAGGGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS TCA 90 bp GTACATGAGTTGTGTCAGCACAGGCTTGGGTACTTTGGTCCATACTaGGAAGGCTGTGGTTCTCCAATAGAGGACATTATTGCCTCGATT +
Preference number: 5 (lower is better)
Translates to: VHELCQHRLGYFGPY*EGCGSPIEDIIASI
Trigger: AATCGAGGCAATAATGTCCTCTATTGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGACACAACTCATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529753.5
CDS CCA 90 bp ATCGCAGGCCGTGTGTGTGTAGAAATAATCTTTGTCTGTGCAAGCTaGGCGCACGTTACAGGAAGAAGATCCTTTCTCTGTTATGGCAAT +
Preference number: 5 (lower is better)
Translates to: IAGRVCVEIIFVCAS*AHVTGRRSFLCYGN
Trigger: ATTGCCATAACAGAGAAAGGATCTTCTTCCTGTAACGTGCGCCCAGCTTGCACAGACAAAGATTATTTCTACACACACACGGCCTGCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457623.6
CDS-3UTR CAA 90 bp TACAGGTGCCTGCAGAGATGCCCACTTTCAGCCAGAAATCTATGGTTTTGCAGACTACAGATTTTCGGCTaGGCCCATTTGTACATGAGT +
Preference number: 5 (lower is better)
Translates to: YRCLQRCPLSARNLWFCRLQIFG*AHLYMS
Trigger: ACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAG...TCTGCAAAACCATAGATTTCTGGCTGAAAGTGGGCATCTCTGCAGGCACCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527996.5
CDS-3UTR CAA 90 bp AGTCTAAGGGCTGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTGAGACAACAGGCTTGGGTACTTaGGTCCATACTGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: SLRAVCGLCHKRKLFSETTGLGT*VHTEKA
Trigger: AGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGT...TGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS TCA 90 bp ATGAGTTGTGTCTGCAGAAATGGATTAAGCACAACTCAGCCTGTGTaGGATTTAGGACATCTTTGGGACTCTACCTTGAGGATAGGGGCT +
Preference number: 5 (lower is better)
Translates to: MSCVCRNGLSTTQPV*DLGHLWDSTLRIGA
Trigger: AGCCCCTATCCTCAAGGTAGAGTCCCAAAGATGTCCTAAATCTCACACAGGCTGAGTTGTGCTTAATCCATTTCTGCAGACACAACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369936.2
CDS CCA 90 bp TCTCTGTTATGGCAATGTTTCTCACCAGCACAGGCTTGGGTACTTTaGTCCATACTGAGAAGGCTGTGGTTCTCCAATAGAGGACATTAT +
Preference number: 5 (lower is better)
Translates to: SLLWQCFSPAQAWVL*SILRRLWFSNRGHY
Trigger: ATAATGTCCTCTATTGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGAGAAACATTGCCATAACAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457623.6
CDS CCA 90 bp AAGATCCTTTCTCTGTTATGGCAATGTTTCTCACCAGCACAGGCTTaGGTACTTTGGTCCATACTGAGAAGGCTGTGGTTCTCCAATAGA +
Preference number: 5 (lower is better)
Translates to: KILSLLWQCFSPAQA*VLWSILRRLWFSNR
Trigger: TCTATTGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGAGAAACATTGCCATAACAGAGAAAGGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457623.6
CDS-3UTR CAA 90 bp AAACTCCCAGCTGTTTCTGCCCTTAAGTTAGAGGACAGAGGAAATAGTTTCTATCCATTTTCACTCCCTTaGAGCTGGTTATCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: KLPAVSALKLEDRGNSFYPFSLP*SWLSRG
Trigger: TCCCCTGGATAACCAGCTCAAAGGGAGTGAAAATGG...ATAGAAACTATTTCCTCTGTCCTCTAACTTAAGGGCAGAAACAGCTGGGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS TCA 90 bp CCTCAGATCGAGTCACAGACAAAAACGTGCCCTTATAGGTTGAACTaGGGGGTTGATGAACATGATCTGTGCAGATACCATACATATGAA +
Preference number: 5 (lower is better)
Translates to: PQIESQTKTCPYRLN*GVDEHDLCRYHTYE
Trigger: TTCATATGTATGGTATCTGCACAGATCATGTTCATCAACCCCTCAGTTCAACCTATAAGGGCACGTTTTTGTCTGTGACTCGATCTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS CCA 90 bp GATTTTCGGCTTGGCCCATTTGTACATGAGTTGTGTCTGCAGAAATaGATTAAGCACAACTCAGCCTGTGTGAGATTTAGGACATCTTTG +
Preference number: 5 (lower is better)
Translates to: DFRLGPFVHELCLQK*IKHNSACVRFRTSL
Trigger: CAAAGATGTCCTAAATCTCACACAGGCTGAGTTGTGCTTAATCCATTTCTGCAGACACAACTCATGTACAAATGGGCCAAGCCGAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369936.2
CDS-3UTR CAA 90 bp ATAAGAATTATGAGCAGACGAAGCTATGGCTCTGGCGGATGGGCCATTTTGGGAAAACAAAAACATTCCTaGTTGCCTCTCTTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: IRIMSRRSYGSGGWAILGKQKHS*LPLFVL
Trigger: AAGCACAAAGAGAGGCAACAAGGAATGTTTTTGTTT...TCCCAAAATGGCCCATCCGCCAGAGCCATAGCTTCGTCTGCTCATAATTCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS-3UTR CAA 90 bp AGTCTAAGGGCTGTCTGTGGCCTTTGTCACAAAAGAAAGCTATTCAGTGAGACATTGGAGGTAAATGATTaGATCTTCCCAAAGAGTGAC +
Preference number: 5 (lower is better)
Translates to: SLRAVCGLCHKRKLFSETLEVND*IFPKSD
Trigger: GTCACTCTTTGGGAAGATCAAATCATTTACCTCCAA...TGTCTCACTGAATAGCTTTCTTTTGTGACAAAGGCCACAGACAGCCCTTAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369939.8
CDS CCA 72 bp CTCAGGTGCTGCGGCTGCTGCTTCTGCGGGTCGCCATaGCAGCCGCCGCCGCTGGTGCGCGCGGCGTGGGCG +
Preference number: 6 (lower is better)
Translates to: LRCCGCCFCGSP*QPPPLVRAAWA
Trigger: CGCCCACGCCGCGCGCACCAGCGGCGGCGGCTGCCATGGCGACCCGCAGAAGCAGCAGCCGCAGCACCTGAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533147.5
CDS GCA 72 bp CCCCTGCTCAGCTCGGCCCTCTTCCCTGCGGAGGGCTaGGACAGCCAGAGCCCCAGGCTTGAACCTCACCTG +
Preference number: 6 (lower is better)
Translates to: PLLSSALFPAEG*DSQSPRLEPHL
Trigger: CAGGTGAGGTTCAAGCCTGGGGCTCTGGCTGTCGCAGCCCTCCGCAGGGAAGAGGGCCGAGCTGAGCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS CAA 72 bp GTAGCGGCTCAGGTGCTGCGGCTGCTGCTTGTCGCCTaGACAACCGCCTCCTCTCTGGCTCCGCGCGGGTGG +
Preference number: 6 (lower is better)
Translates to: VAAQVLRLLLVA*TTASSLAPRGW
Trigger: CCACCCGCGCGGAGCCAGAGAGGAGGCGGTTGTCAAGGCGACAAGCAGCAGCCGCAGCACCTGAGCCGCTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534476.5
CDS TCA 72 bp TGGTGGCTGTGCCCAGGCTCAGCCATAGCGTTGTCCTaGGTGAGCGGCAGTAGCGGCTCAGGTGCTGCGGCT +
Preference number: 6 (lower is better)
Translates to: WWLCPGSAIALS*VSGSSGSGAAA
Trigger: AGCCGCAGCACCTGAGCCGCTACTGCCGCTCACTCAGGACAACGCTATGGCTGAGCCTGGGCACAGCCACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369939.8
ENST00000457623.6
ENST00000526264.5
ENST00000531664.5
ENST00000533147.5
ENST00000534476.5
CDS TCA 72 bp GCAGACACCCGGGCTTTCAGGCAGCAAGCACGGTACTaGCCCAGAAGGCCTTGGCGTGAGCCCAGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: ADTRAFRQQARY*PRRPWREPREG
Trigger: TCCCTCCCTGGGCTCACGCCAAGGCCTTCTGGGTCAGTACCGTGCTTGCTGCCTGAAAGCCCGGGTGTCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS TCA 72 bp GCGCAACCGGCCCAACAGGCAGGCCCGGGGCTCGTGTaGAGAACACAGTGGAAGCATCCTCCAAGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: AQPAQQAGPGLV*RTQWKHPPSQP
Trigger: TGGCTGGCTTGGAGGATGCTTCCACTGTGTTCTTCACACGAGCCCCGGGCCTGCCTGTTGGGCCGGTTGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533147.5
CDS CCA 72 bp ACAGGCCCGGGGTATGCGGCACGGCGACCCTCCACCTaGAACCCGTGCTGTCACACGCCGTGTACTCATAGT +
Preference number: 6 (lower is better)
Translates to: TGPGYAARRPST*NPCCHTPCTHS
Trigger: ACTATGAGTACACGGCGTGTGACAGCACGGGTTCCAGGTGGAGGGTCGCCGTGCCGCATACCCCGGGCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369939.8
ENST00000457623.6
ENST00000526264.5
ENST00000529753.5
ENST00000531664.5
ENST00000533147.5
ENST00000533374.1
ENST00000534476.5
CDS CCA 72 bp CGGGTGCGATGGCCAGAGGGGAAGTGGGTGCCCATGTaGCTGCCATCCCAGGTGCCATCACGGTTGGTGAGA +
Preference number: 6 (lower is better)
Translates to: RVRWPEGKWVPM*LPSQVPSRLVR
Trigger: TCTCACCAACCGTGATGGCACCTGGGATGGCAGCCACATGGGCACCCACTTCCCCTCTGGCCATCGCACCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464345.1
CDS GCA 72 bp GGGTATGCGGCACGGCGACCCTCCACCTGGAACCCGTaGTGTCACACGCCGTGTACTCATAGTGGTACTCAG +
Preference number: 6 (lower is better)
Translates to: GYAARRPSTWNP*CHTPCTHSGTQ
Trigger: CTGAGTACCACTATGAGTACACGGCGTGTGACAGCACGGGTTCCAGGTGGAGGGTCGCCGTGCCGCATACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369939.8
ENST00000457623.6
ENST00000526264.5
ENST00000529753.5
ENST00000531664.5
ENST00000533147.5
ENST00000533374.1
ENST00000534476.5
CDS CCA 72 bp GGCCTTGGCTGTGCTGCAAGGCGGGAACACAGGCTTTaGTCTGACCCAGCATCTAAAGGCCCCGGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: GLGCAARREHRL*SDPASKGPGSG
Trigger: ACCACTGCCGGGGCCTTTAGATGCTGGGTCAGACCAAAGCCTGTGTTCCCGCCTTGCAGCACAGCCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS CCA 72 bp AGACAAGTGAAGCGGGTGCGATGGCCAGAGGGGAAGTaGGTGCCCATGTGGCTGCCATCCCAGGTGCCATCA +
Preference number: 6 (lower is better)
Translates to: RQVKRVRWPEGK*VPMWLPSQVPS
Trigger: TGATGGCACCTGGGATGGCAGCCACATGGGCACCCACTTCCCCTCTGGCCATCGCACCCGCTTCACTTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464345.1
CDS CAA 90 bp ACTCCTGAAAGCACACGCTTCAGTGCTCCTCCTCTGAGCTGGGCCTaGGCTGTGCTGCAAGGCGGGAACACAGGCTTTGGTCTGACCCAG +
Preference number: 6 (lower is better)
Translates to: TPESTRFSAPPLSWA*AVLQGGNTGFGLTQ
Trigger: CTGGGTCAGACCAAAGCCTGTGTTCCCGCCTTGCAGCACAGCCAAGGCCCAGCTCAGAGGAGGAGCACTGAAGCGTGTGCTTTCAGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS TCA 72 bp GCCGAGGGAGTAGCGGCCCTCAGCGCATGGCTTACATaGCTGGTCCTTCATATCCAGAAACTCCCCGGCGTT +
Preference number: 6 (lower is better)
Translates to: AEGVAALSAWLT*LVLHIQKLPGV
Trigger: AACGCCGGGGAGTTTCTGGATATGAAGGACCAGTCATGTAAGCCATGCGCTGAGGGCCGCTACTCCCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000369939.8
ENST00000457623.6
ENST00000490758.6
ENST00000526264.5
ENST00000527996.5
ENST00000529753.5
ENST00000531664.5
ENST00000533374.1
ENST00000534476.5
CDS CCA 72 bp GTCCTAGGAGCTGGCAAACTGTCTCGGGCCAGCTCTTaGAGCAGCACATTCACTGACCCCAATGGATGGGCC +
Preference number: 6 (lower is better)
Translates to: VLGAGKLSRASS*SSTFTDPNGWA
Trigger: GGCCCATCCATTGGGGTCAGTGAATGTGCTGCTCCAAGAGCTGGCCCGAGACAGTTTGCCAGCTCCTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS CAA 90 bp ATCCAGATTCTGGGCCAGGTAAGAGCTCCTCTGGGGTGGGGAACTTaGTGTGGCTCACGGATGTATCCCAAGCACCTAGCCCAGTGCCTG +
Preference number: 6 (lower is better)
Translates to: IQILGQVRAPLGWGT*CGSRMYPKHLAQCL
Trigger: CAGGCACTGGGCTAGGTGCTTGGGATACATCCGTGAGCCACACAAAGTTCCCCACCCCAGAGGAGCTCTTACCTGGCCCAGAATCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369936.2
CDS CAA 90 bp CCCATGTGGCTGCCATCCCAGGTGCCATCACGGTTGGTGAGACCCTaGTTAAACTGTGAAGTCCCTGCTGGTCAGTCTGGGCCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: PMWLPSQVPSRLVRP*LNCEVPAGQSGPFL
Trigger: GAGGAAAGGCCCAGACTGACCAGCAGGGACTTCACAGTTTAACAAGGGTCTCACCAACCGTGATGGCACCTGGGATGGCAGCCACATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464345.1
CDS CAA 90 bp GGGAAGTGGGTGCCCATGTGGCTGCCATCCCAGGTGCCATCACGGTaGGTGAGACCCTTGTTAAACTGTGAAGTCCCTGCTGGTCAGTCT +
Preference number: 6 (lower is better)
Translates to: GKWVPMWLPSQVPSR*VRPLLNCEVPAGQS
Trigger: AGACTGACCAGCAGGGACTTCACAGTTTAACAAGGGTCTCACCAACCGTGATGGCACCTGGGATGGCAGCCACATGGGCACCCACTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464345.1
CDS CAA 72 bp CTGCCATCCCAGGTGCCATCACGGTTGGTGAGACCCTaGTTAAACTGTGAAGTCCCTGCTGGTCAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: LPSQVPSRLVRP*LNCEVPAGQSG
Trigger: CCCAGACTGACCAGCAGGGACTTCACAGTTTAACAAGGGTCTCACCAACCGTGATGGCACCTGGGATGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464345.1
CDS CAA 72 bp GTGCCCATGTGGCTGCCATCCCAGGTGCCATCACGGTaGGTGAGACCCTTGTTAAACTGTGAAGTCCCTGCT +
Preference number: 6 (lower is better)
Translates to: VPMWLPSQVPSR*VRPLLNCEVPA
Trigger: AGCAGGGACTTCACAGTTTAACAAGGGTCTCACCAACCGTGATGGCACCTGGGATGGCAGCCACATGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464345.1
CDS TCA 72 bp AGGAACAGCTGGGGAATGCATGTTCATGCGCACTCCTaGAAGCACACGCTTCAGTGCTCCTCCTCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: RNSWGMHVHAHS*KHTLQCSSSEL
Trigger: CAGCTCAGAGGAGGAGCACTGAAGCGTGTGCTTTCAGGAGTGCGCATGAACATGCATTCCCCAGCTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS TCA 72 bp GGTGCCATCACGGTTGGTGAGACCCTTGTTAAACTGTaGAGTCCCTGCTGGTCAGTCTGGGCCTTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: GAITVGETLVKL*SPCWSVWAFPL
Trigger: CAGAGGAAAGGCCCAGACTGACCAGCAGGGACTTCACAGTTTAACAAGGGTCTCACCAACCGTGATGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464345.1
CDS TCA 72 bp GTCTCCACAGGAGTGTTGGTCCTAGAATTCACACCCTaGACCCAGGACAGACAAGTGAAGCGGGTGCGATGG +
Preference number: 6 (lower is better)
Translates to: VSTGVLVLEFTP*TQDRQVKRVRW
Trigger: CCATCGCACCCGCTTCACTTGTCTGTCCTGGGTTCAGGGTGTGAATTCTAGGACCAACACTCCTGTGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464345.1
CDS CAA 90 bp GGCAGCTTCACTGCCCCCTCAAGGTCCTCGCTACAGATTTTCGGCTaGGCCCATTTGTACATGAGTTGTGTCAGCACAGGCTTGGGTACT +
Preference number: 6 (lower is better)
Translates to: GSFTAPSRSSLQIFG*AHLYMSCVSTGLGT
Trigger: AGTACCCAAGCCTGTGCTGACACAACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGAGGGGGCAGTGAAGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529753.5
CDS CAA 72 bp ACTGCCCCCTCAAGGTCCTCGCTACAGATTTTCGGCTaGGCCCATTTGTACATGAGTTGTGTCAGCACAGGC +
Preference number: 6 (lower is better)
Translates to: TAPSRSSLQIFG*AHLYMSCVSTG
Trigger: GCCTGTGCTGACACAACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGAGGGGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529753.5
CDS GCA 72 bp GCACAAAGCAGAAGTCTGCAAGGAACAGCTGGGGAATaGATGTTCATGCGCACTCCTGAAAGCACACGCTTC +
Preference number: 6 (lower is better)
Translates to: AQSRSLQGTAGE*MFMRTPESTRF
Trigger: GAAGCGTGTGCTTTCAGGAGTGCGCATGAACATGCATTCCCCAGCTGTTCCTTGCAGACTTCTGCTTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS CAA 72 bp AAGCACAACTCAGCCTGTGTGAGATTTAGGACATCTTaGGGACTCTACCTTGAGGATAGGGGCTGGGGGCAG +
Preference number: 6 (lower is better)
Translates to: KHNSACVRFRTS*GLYLEDRGWGQ
Trigger: CTGCCCCCAGCCCCTATCCTCAAGGTAGAGTCCCAAAGATGTCCTAAATCTCACACAGGCTGAGTTGTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369936.2
CDS CAA 72 bp ACTGCCCCCTCAAGGTCCTCGCTACAGATTTTCGGCTaGGCCCATTTGTACATGAGTTGTGTCTGGTGTCTC +
Preference number: 6 (lower is better)
Translates to: TAPSRSSLQIFG*AHLYMSCVWCL
Trigger: GAGACACCAGACACAACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGAGGGGGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS CAA 90 bp GGCAGCTTCACTGCCCCCTCAAGGTCCTCGCTACAGATTTTCGGCTaGGCCCATTTGTACATGAGTTGTGTCTGGTGTCTCAGAGATGAA +
Preference number: 6 (lower is better)
Translates to: GSFTAPSRSSLQIFG*AHLYMSCVWCLRDE
Trigger: TTCATCTCTGAGACACCAGACACAACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGAGGGGGCAGTGAAGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS CAA 90 bp GGCAGCTTCACTGCCCCCTCAAGGTCCTCGCTACAGATTTTCGGCTaGGCCCATTTGTACATGAGTTGTGTCTGCAGAAATGGATTAAGC +
Preference number: 6 (lower is better)
Translates to: GSFTAPSRSSLQIFG*AHLYMSCVCRNGLS
Trigger: GCTTAATCCATTTCTGCAGACACAACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGAGGGGGCAGTGAAGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369936.2
CDS TCA 72 bp ATACCAGACACCACAGAACTGAGTCTAAGGTGCAACTaGCAAGACACAGCCATTCTCTCTTGGCTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: IPDTTELSLRCN*QDTAILSWLLE
Trigger: CTCCAGCAGCCAAGAGAGAATGGCTGTGTCTTGTCAGTTGCACCTTAGACTCAGTTCTGTGGTGTCTGGTAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS TCA 72 bp CCCTCTAGCGGGCAAAGAAAGGAAAACGTACCACCATaGAGTAGAGCTCACAGTTCACAGAACAGAGGGTCT +
Preference number: 6 (lower is better)
Translates to: PSSGQRKENVPP*SRAHSSQNRGS
Trigger: AGACCCTCTGTTCTGTGAACTGTGAGCTCTACTTCATGGTGGTACGTTTTCCTTTCTTTGCCCGCTAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464345.1
ENST00000490758.6
CDS TCA 72 bp AGAATTGCTCAGTGGGGAACAGCTGAGACTGAACTATaGTTCAGCTCCCAAAGGACTGGACCCAGACACCTT +
Preference number: 6 (lower is better)
Translates to: RIAQWGTAETEL*FSSQRTGPRHL
Trigger: AAGGTGTCTGGGTCCAGTCCTTTGGGAGCTGAATCATAGTTCAGTCTCAGCTGTTCCCCACTGAGCAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527501.1
CDS CAA 72 bp ACTGCCCCCTCAAGGTCCTCGCTACAGATTTTCGGCTaGGCCCATTTGTACATGAGTTGTGTCTGCAGAAAT +
Preference number: 6 (lower is better)
Translates to: TAPSRSSLQIFG*AHLYMSCVCRN
Trigger: ATTTCTGCAGACACAACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGAGGGGGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369936.2
CDS CAA 72 bp TCAAGGTCCTCGCTACAGATTTTCGGCTTGGCCCATTaGTACATGAGTTGTGTCAGCACAGGCTTGGGTACT +
Preference number: 6 (lower is better)
Translates to: SRSSLQIFGLAH*YMSCVSTGLGT
Trigger: AGTACCCAAGCCTGTGCTGACACAACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529753.5
CDS CAA 90 bp AAATGGATTAAGCACAACTCAGCCTGTGTGAGATTTAGGACATCTTaGGGACTCTACCTTGAGGATAGGGGCTGGGGGCAGAGATCCAGA +
Preference number: 6 (lower is better)
Translates to: KWIKHNSACVRFRTS*GLYLEDRGWGQRSR
Trigger: TCTGGATCTCTGCCCCCAGCCCCTATCCTCAAGGTAGAGTCCCAAAGATGTCCTAAATCTCACACAGGCTGAGTTGTGCTTAATCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369936.2
CDS CAA 90 bp ACTGCCCCCTCAAGGTCCTCGCTACAGATTTTCGGCTTGGCCCATTaGTACATGAGTTGTGTCTGCAGAAATGGATTAAGCACAACTCAG +
Preference number: 6 (lower is better)
Translates to: TAPSRSSLQIFGLAH*YMSCVCRNGLSTTQ
Trigger: CTGAGTTGTGCTTAATCCATTTCTGCAGACACAACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGAGGGGGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369936.2
CDS GCA 72 bp ACTCAGACTGCAGGGGAGAGAACAGTGGGCGAAATGTaGATTAGCAGTGATCAAACATTAACAGCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: TQTAGERTVGEM*ISSDQTLTASH
Trigger: GTGGGAAGCTGTTAATGTTTGATCACTGCTAATGCACATTTCGCCCACTGTTCTCTCCCCTGCAGTCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533374.1
CDS CCA 72 bp TCTCTGTTATGGCAATGTTTCTCACCAGCACAGGCTTaGGTACTTTGGTCCATACTGAGAAGGCTGTGGTTC +
Preference number: 6 (lower is better)
Translates to: SLLWQCFSPAQA*VLWSILRRLWF
Trigger: GAACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGAGAAACATTGCCATAACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457623.6
CDS CAA 90 bp GTCCTCTTGGAGGTAAATGATTTGATCTTCCCAAAGAGTGACTTCTaGCTGGTAAAGATGAGGTCGTCCTCTACATCCTCGCCTTCCATG +
Preference number: 6 (lower is better)
Translates to: VLLEVNDLIFPKSDF*LVKMRSSSTSSPSM
Trigger: CATGGAAGGCGAGGATGTAGAGGACGACCTCATCTTTACCAGCAAGAAGTCACTCTTTGGGAAGATCAAATCATTTACCTCCAAGAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369936.2
ENST00000369938.5
ENST00000369939.8
ENST00000529753.5
CDS CAA 90 bp GACACCTTGGAGGTAAATGATTTGATCTTCCCAAAGAGTGACTTCTaGCTGGTAAAGATGAGGTCGTCCTCTACATCCTCGCCTTCCATG +
Preference number: 6 (lower is better)
Translates to: DTLEVNDLIFPKSDF*LVKMRSSSTSSPSM
Trigger: CATGGAAGGCGAGGATGTAGAGGACGACCTCATCTTTACCAGCAAGAAGTCACTCTTTGGGAAGATCAAATCATTTACCTCCAAGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527501.1
CDS TCA 72 bp TTGTACATGAGTTGTGTCTGGTGTCTCAGAGATGAATaGAACATGGCCCCTGCATTGGGTACAGAAGTGGAG +
Preference number: 6 (lower is better)
Translates to: LYMSCVWCLRDE*NMAPALGTEVE
Trigger: CTCCACTTCTGTACCCAATGCAGGGGCCATGTTTCATTCATCTCTGAGACACCAGACACAACTCATGTACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS CAA 72 bp TCAAGGTCCTCGCTACAGATTTTCGGCTTGGCCCATTaGTACATGAGTTGTGTCTGGTGTCTCAGAGATGAA +
Preference number: 6 (lower is better)
Translates to: SRSSLQIFGLAH*YMSCVWCLRDE
Trigger: TTCATCTCTGAGACACCAGACACAACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAGCGAGGACCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS CAA 72 bp TTCTCTGTTATGGCAATGTTTCTCACCAGCACAGGCTaGGGTACTTTGGTCCATACTGAGAAGGCTGTGGTT +
Preference number: 6 (lower is better)
Translates to: FSVMAMFLTSTG*GTLVHTEKAVV
Trigger: AACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGGTGAGAAACATTGCCATAACAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457623.6
CDS TCA 72 bp GTCTGCAGAAATGGATTAAGCACAACTCAGCCTGTGTaGGATTTAGGACATCTTTGGGACTCTACCTTGAGG +
Preference number: 6 (lower is better)
Translates to: VCRNGLSTTQPV*DLGHLWDSTLR
Trigger: CCTCAAGGTAGAGTCCCAAAGATGTCCTAAATCTCACACAGGCTGAGTTGTGCTTAATCCATTTCTGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369936.2
CDS TCA 72 bp CCATTTGTACATGAGTTGTGTCTGGTGTCTCAGAGATaGATGAAACATGGCCCCTGCATTGGGTACAGAAGT +
Preference number: 6 (lower is better)
Translates to: PFVHELCLVSQR*MKHGPCIGYRS
Trigger: ACTTCTGTACCCAATGCAGGGGCCATGTTTCATTCATCTCTGAGACACCAGACACAACTCATGTACAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS TCA 72 bp CCTCGCTACAGATTTTCGGCTTGGCCCATTTGTACATaGGTTGTGTCTGGTGTCTCAGAGATGAATGAAACA +
Preference number: 6 (lower is better)
Translates to: PRYRFSAWPICT*VVSGVSEMNET
Trigger: TGTTTCATTCATCTCTGAGACACCAGACACAACTCATGTACAAATGGGCCAAGCCGAAAATCTGTAGCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS TCA 72 bp TTGTGTCAGCACAGGCTTGGGTACTTTGGTCCATACTaGGAAGGCTGTGGTTCTCCAATAGAGGACATTATT +
Preference number: 6 (lower is better)
Translates to: LCQHRLGYFGPY*EGCGSPIEDII
Trigger: AATAATGTCCTCTATTGGAGAACCACAGCCTTCTCAGTATGGACCAAAGTACCCAAGCCTGTGCTGACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529753.5
CDS TCA 72 bp GAGTCACAGACAAAAACGTGCCCTTATAGGTTGAACTaGGGGGTTGATGAACATGATCTGTGCAGATACCAT +
Preference number: 6 (lower is better)
Translates to: ESQTKTCPYRLN*GVDEHDLCRYH
Trigger: ATGGTATCTGCACAGATCATGTTCATCAACCCCTCAGTTCAACCTATAAGGGCACGTTTTTGTCTGTGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS TCA 72 bp AGATCGAGTCACAGACAAAAACGTGCCCTTATAGGTTaGACTGAGGGGTTGATGAACATGATCTGTGCAGAT +
Preference number: 6 (lower is better)
Translates to: RSSHRQKRALIG*TEGLMNMICAD
Trigger: ATCTGCACAGATCATGTTCATCAACCCCTCAGTTCAACCTATAAGGGCACGTTTTTGTCTGTGACTCGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369938.5
CDS TCA 72 bp GAGCTGATGATTATGAACCGAGTACAAGAACTACAATaGTTTGGATCATTCCCTTCCACCCAGCCATGGTCT +
Preference number: 6 (lower is better)
Translates to: ELMIMNRVQELQ*FGSFPSTQPWS
Trigger: AGACCATGGCTGGGTGGAAGGGAATGATCCAAATCATTGTAGTTCTTGTACTCGGTTCATAATCATCAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533374.1
CDS CCA 72 bp CTTGGCCCATTTGTACATGAGTTGTGTCTGCAGAAATaGATTAAGCACAACTCAGCCTGTGTGAGATTTAGG +
Preference number: 6 (lower is better)
Translates to: LGPFVHELCLQK*IKHNSACVRFR
Trigger: CCTAAATCTCACACAGGCTGAGTTGTGCTTAATCCATTTCTGCAGACACAACTCATGTACAAATGGGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369936.2
CDS CAA 72 bp TCAAATCCATCAGGAGTCCTCTTGGAGGTAAATGATTaGATCTTCCCAAAGAGTGACTTCTTGCTGGTAAAG +
Preference number: 6 (lower is better)
Translates to: SNPSGVLLEVND*IFPKSDFLLVK
Trigger: CTTTACCAGCAAGAAGTCACTCTTTGGGAAGATCAAATCATTTACCTCCAAGAGGACTCCTGATGGATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369936.2
ENST00000369938.5
ENST00000369939.8
ENST00000529753.5