Pregenerated sensors for EIPR1-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000224885Ensembl transcript IDs: ENST00000454977.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGCAGAGGTCAGCATCACGGGCACGCAAGTTCCTCTGTGTCTGCATaGGATTCCGCAATGAGCCTTGCTTTTCAGATGCAGCTTCCGGGA | + |
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Preference number: 5 (lower is better) Translates to: SRGQHHGHASSSVSA*DSAMSLAFQMQLPG Trigger: TCCCGGAAGCTGCATCTGAAAAGCAAGGCTCATTGCGGAATCTCATGCAGACACAGAGGAACTTGCGTGCCCGTGATGCTGACCTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS GCA 90 bp | GACAAGCAGAGGTCAGCATCACGGGCACGCAAGTTCCTCTGTGTCTaGATGAGATTCCGCAATGAGCCTTGCTTTTCAGATGCAGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: DKQRSASRARKFLCV*MRFRNEPCFSDAAS Trigger: GGAAGCTGCATCTGAAAAGCAAGGCTCATTGCGGAATCTCATGCAGACACAGAGGAACTTGCGTGCCCGTGATGCTGACCTCTGCTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS GCA 90 bp | GCACGCAAGTTCCTCTGTGTCTGCATGAGATTCCGCAATGAGCCTTaGTTTTCAGATGCAGCTTCCGGGATGAGTGACTCAGTTCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: ARKFLCVCMRFRNEP*FSDAASGMSDSVPS Trigger: ACTTGGAACTGAGTCACTCATCCCGGAAGCTGCATCTGAAAAGCAAGGCTCATTGCGGAATCTCATGCAGACACAGAGGAACTTGCGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS GCA 90 bp | GTGTGGGAGAGAATCCAAGTCTTGCTAGTGTCAGATTACATCTATTaGTTCCCCTGGACCCATCTTGTCTGTGAACTCCGGACAGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: VWERIQVLLVSDYIY*FPWTHLVCELRTVP Trigger: TGGCACTGTCCGGAGTTCACAGACAAGATGGGTCCAGGGGAAGCAATAGATGTAATCTGACACTAGCAAGACTTGGATTCTCTCCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS CCA 90 bp | AGAATCCAAGTCTTGCTAGTGTCAGATTACATCTATTGCTTCCCCTaGACCCATCTTGTCTGTGAACTCCGGACAGTGCCAATTCCAACA | + |
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Preference number: 5 (lower is better) Translates to: RIQVLLVSDYIYCFP*THLVCELRTVPIPT Trigger: TGTTGGAATTGGCACTGTCCGGAGTTCACAGACAAGATGGGTCCAGGGGAAGCAATAGATGTAATCTGACACTAGCAAGACTTGGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS GCA 72 bp | TCCCCTGGACCCATCTTGTCTGTGAACTCCGGACAGTaGCAATTCCAACAGCACAGGCTTCTGTGTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SPGPILSVNSGQ*QFQQHRLLCVL Trigger: AAGAACACACAGAAGCCTGTGCTGTTGGAATTGGCACTGTCCGGAGTTCACAGACAAGATGGGTCCAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS TCA 72 bp | GCAATGAGCCTTGCTTTTCAGATGCAGCTTCCGGGATaGGTGACTCAGTTCCAAGTGAGATGCAGTAGACGG | + |
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Preference number: 6 (lower is better) Translates to: AMSLAFQMQLPG*VTQFQVRCSRR Trigger: CCGTCTACTGCATCTCACTTGGAACTGAGTCACTCATCCCGGAAGCTGCATCTGAAAAGCAAGGCTCATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS TCA 72 bp | ACGCAAGTTCCTCTGTGTCTGCATGAGATTCCGCAATaGGCCTTGCTTTTCAGATGCAGCTTCCGGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: TQVPLCLHEIPQ*ALLFRCSFRDE Trigger: CTCATCCCGGAAGCTGCATCTGAAAAGCAAGGCTCATTGCGGAATCTCATGCAGACACAGAGGAACTTGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS TCA 72 bp | TTACATCTATTGCTTCCCCTGGACCCATCTTGTCTGTaGACTCCGGACAGTGCCAATTCCAACAGCACAGGC | + |
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Preference number: 6 (lower is better) Translates to: LHLLLPLDPSCL*TPDSANSNSTG Trigger: GCCTGTGCTGTTGGAATTGGCACTGTCCGGAGTTCACAGACAAGATGGGTCCAGGGGAAGCAATAGATGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS GCA 72 bp | AGGTCAGCATCACGGGCACGCAAGTTCCTCTGTGTCTaGATGAGATTCCGCAATGAGCCTTGCTTTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: RSASRARKFLCV*MRFRNEPCFSD Trigger: ATCTGAAAAGCAAGGCTCATTGCGGAATCTCATGCAGACACAGAGGAACTTGCGTGCCCGTGATGCTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS CCA 72 bp | GTCTTGCTAGTGTCAGATTACATCTATTGCTTCCCCTaGACCCATCTTGTCTGTGAACTCCGGACAGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: VLLVSDYIYCFP*THLVCELRTVP Trigger: TGGCACTGTCCGGAGTTCACAGACAAGATGGGTCCAGGGGAAGCAATAGATGTAATCTGACACTAGCAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS CAA 72 bp | TGTCAGATTACATCTATTGCTTCCCCTGGACCCATCTaGTCTGTGAACTCCGGACAGTGCCAATTCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: CQITSIASPGPI*SVNSGQCQFQQ Trigger: CTGTTGGAATTGGCACTGTCCGGAGTTCACAGACAAGATGGGTCCAGGGGAAGCAATAGATGTAATCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS GCA 72 bp | AGAATCCAAGTCTTGCTAGTGTCAGATTACATCTATTaGTTCCCCTGGACCCATCTTGTCTGTGAACTCCGG | + |
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Preference number: 6 (lower is better) Translates to: RIQVLLVSDYIY*FPWTHLVCELR Trigger: CCGGAGTTCACAGACAAGATGGGTCCAGGGGAAGCAATAGATGTAATCTGACACTAGCAAGACTTGGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS CAA 72 bp | ATTGATGGCTGGGTTGTGTGGGAGAGAATCCAAGTCTaGCTAGTGTCAGATTACATCTATTGCTTCCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: IDGWVVWERIQV*LVSDYIYCFPW Trigger: CCAGGGGAAGCAATAGATGTAATCTGACACTAGCAAGACTTGGATTCTCTCCCACACAACCCAGCCATCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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| CDS CCA 72 bp | CCTAGATACTGCCGTTTTATTGATGGCTGGGTTGTGTaGGAGAGAATCCAAGTCTTGCTAGTGTCAGATTAC | + |
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Preference number: 6 (lower is better) Translates to: PRYCRFIDGWVV*ERIQVLLVSDY Trigger: GTAATCTGACACTAGCAAGACTTGGATTCTCTCCCACACAACCCAGCCATCAATAAAACGGCAGTATCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454977.1 |
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