RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF4ENIF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000184708

Ensembl transcript IDs: ENST00000330125.10, ENST00000344710.9, ENST00000397518.5, ENST00000397520.1, ENST00000397523.5, ENST00000397525.5, ENST00000418321.1, ENST00000423097.5, ENST00000441289.1, ENST00000445424.5, ENST00000475437.1, ENST00000487671.1, ENST00000495101.5

Found 707 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTaGTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: DHTRCMGSTKQLHTE*SKVKAHKPTRDEAG
Trigger: CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR GCA 90 bp CTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACACCAGATaGATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTA +
Preference number: 1 (lower is better)
Translates to: LDWLRSFHHNADHTR*MGSTKQLHTECSKV
Trigger: TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR GCA 90 bp TTCTTCACTGGCCTTCTGAGTATCCTCTTTACTGTCACCAAGAGCTaGTTTTCCAGATGCTGGCTCCTCCTTGCTTTTCTCTTTGCTCTC +
Preference number: 1 (lower is better)
Translates to: FFTGLLSILFTVTKS*FSRCWLLLAFLFAL
Trigger: GAGAGCAAAGAGAAAAGCAAGGAGGAGCCAGCATCTGGAAAAGCAGCTCTTGGTGACAGTAAAGAGGATACTCAGAAGGCCAGTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR GCA 90 bp TGTTGTAGGAACTGGGGATGCCAAGGTGGGTGTTTTTCTCCCAGTTaGTTTAGGTCGATAATCTTGTTCTTTGGTGTAACGGTTGGCCTG +
Preference number: 1 (lower is better)
Translates to: CCRNWGCQGGCFSPS*FRSIILFFGVTVGL
Trigger: CAGGCCAACCGTTACACCAAAGAACAAGATTATCGACCTAAAGCAACTGGGAGAAAAACACCCACCTTGGCATCCCCAGTTCCTACAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR GCA 90 bp CTTCTGAGTATCCTCTTTACTGTCACCAAGAGCTGCTTTTCCAGATaGTGGCTCCTCCTTGCTTTTCTCTTTGCTCTCGTACATCTTACG +
Preference number: 1 (lower is better)
Translates to: LLSILFTVTKSCFSR*WLLLAFLFALVHLT
Trigger: CGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGGAGGAGCCAGCATCTGGAAAAGCAGCTCTTGGTGACAGTAAAGAGGATACTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR CCA 90 bp CAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTaGTTAAGATCCTTCCATCATAATGCGGACCACACCAGATGCATG +
Preference number: 1 (lower is better)
Translates to: QHCASCIQTMYTPLD*LRSFHHNADHTRCM
Trigger: CATGCATCTGGTGTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR-3UTR CCA 90 bp GGCCTAACCATAGGGACATGGGGGACAAGGGGAACTTGGTGGACAGGGCGGAGACGGGTGCTGGTGACTTaGTCACTCGCTGTTGCCTGT +
Preference number: 2 (lower is better)
Translates to: GLTIGTWGTRGTWWTGRRRVLVT*SLAVAC
Trigger: ACAGGCAACAGCGAGTGACCAAGTCACCAGCACCCG...TCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR GCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAGGGTCCTGCCCAGTGTaGCACCACAGGTCCGGGCTT +
Preference number: 2 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQGSCPV*HHRSGL
Trigger: AAGCCCGGACCTGTGGTGGCACACTGGGCAGGACCC...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR-3UTR CCA 90 bp CAACCCTGGGTGAAGCTGGTGAGCAGGCCTAACCATAGGGACATGGGGGACAAGGTTGGCCTGGGACAGTaGGGTGGAACACGAAGACCT +
Preference number: 2 (lower is better)
Translates to: QPWVKLVSRPNHRDMGDKVGLGQ*GGTRRP
Trigger: AGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAAC...CTTGTCCCCCATGTCCCTATGGTTAGGCCTGCTCACCAGCTTCACCCAGGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR TCA 90 bp AACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCTCTGTAATGCTGACAATGCACGGGTGCTGGTaGCTTGGTCACTCGCTGTTG +
Preference number: 2 (lower is better)
Translates to: NGWPGTVGWNTKTSVMLTMHGCW*LGHSLL
Trigger: CAACAGCGAGTGACCAAGTCACCAGCACCCGTGCAT...TGTCAGCATTACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR GCA 90 bp CTGGTGAGCAGGCCTAACCATAGGGACATGGGGGACAAGGGGAACTTGGTGGACTTGGTCACTCGCTGTTaGCTGTCAGCTCTGGCCAAA +
Preference number: 2 (lower is better)
Translates to: LVSRPNHRDMGDKGNLVDLVTRC*LSALAK
Trigger: TTTGGCCAGAGCTGACAGGCAACAGCGAGTGACCAA...GTCCACCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAGGCCTGCTCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR GCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTGATGAAGCAGGGTCCTaGCCAGTGTGCCACCACAGG +
Preference number: 2 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSDEAGS*PVCHHR
Trigger: CCTGTGGTGGCACACTGGGCAGGACCCTGCTTCATC...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR-3UTR GCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACGGGTCCTGCCCAGTGTaGCACCACAGGTCCGGGCTT +
Preference number: 2 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHGSCPV*HHRSGL
Trigger: AAGCCCGGACCTGTGGTGGCACACTGGGCAGGACCC...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR-3UTR GCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGATGAAGCAGGGTCCTaGCCAGTGTGCCACCACAGG +
Preference number: 2 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVDEAGS*PVCHHR
Trigger: CCTGTGGTGGCACACTGGGCAGGACCCTGCTTCATC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR-3UTR CCA 90 bp CTGGTGAGCAGGCCTAACCATAGGGACATGGGGGACAAGGGGAACTTGGTGGACCACTGGGTACAGAGCTaGATGACAGGAGGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: LVSRPNHRDMGDKGNLVDHWVQS*MTGGFL
Trigger: AAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTG...GTCCACCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAGGCCTGCTCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR GCA 90 bp CGGCACTGGGTACAGAGCTGGATGACAGGAGGTTTTCTTCACTGGCCTTCTGAGACTGTCACCAAGAGCTaGTTTTCCAGATGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: RHWVQSWMTGGFLHWPSETVTKS*FSRCWL
Trigger: GAGCCAGCATCTGGAAAAGCAGCTCTTGGTGACAGT...CTCAGAAGGCCAGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR TCA 90 bp AGTCTCGATCGGCACTGGGTACAGAGCTGGATGACAGGAGGTTTTCTTCACTGGCATCTTACGAATCACTaGGGTAGGGGTAAAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SLDRHWVQSWMTGGFLHWHLTNH*GRGKGR
Trigger: CCTTCCTTTACCCCTACCTCAGTGATTCGTAAGATG...CCAGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTGCCGATCGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR GCA 90 bp CTGGTGAGCAGGCCTAACCATAGGGACATGGGGGACAAGGGGAACTTGGTGGACCCTTGCTTTTCTCTTTaGTCTCGTACATCTTACGAA +
Preference number: 2 (lower is better)
Translates to: LVSRPNHRDMGDKGNLVDPCFSL*SRTSYE
Trigger: TTCGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGG...GTCCACCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAGGCCTGCTCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR CCA 90 bp AGTCTCGATCGGCACTGGGTACAGAGCTGGATGACAGGAGGTTTTCTTCACTGGTGCTTTTCCAGATGCTaGCTCCTCCTTGCTTTTCTC +
Preference number: 2 (lower is better)
Translates to: SLDRHWVQSWMTGGFLHWCFSRC*LLLAFL
Trigger: GAGAAAAGCAAGGAGGAGCCAGCATCTGGAAAAGCA...CCAGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTGCCGATCGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR CAA 90 bp TGCCAAGGTGGGTGTTTTTCTCCCAGTTGCTTTAGGTCGATAATCTaGTTCTTTGGTGTAACGGTTGGCCTGGGACAGTGGGGTGGAACA +
Preference number: 2 (lower is better)
Translates to: CQGGCFSPSCFRSII*FFGVTVGLGQWGGT
Trigger: TGTTCCACCCCACTGTCCCAGGCCAACCGTTACACCAAAGAACAAGATTATCGACCTAAAGCAACTGGGAGAAAAACACCCACCTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR GCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAGATGAAGCAGGGTCCTaGCCAGTGTGCCACCACAGG +
Preference number: 2 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSDEAGS*PVCHHR
Trigger: CCTGTGGTGGCACACTGGGCAGGACCCTGCTTCATC...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR-3UTR GCA 90 bp TGCCAAGGTGGGTGTTTTTCTCCCAGTTGCTTTAGGTCGATAATCTTGTTCTTTGAGGAATTCCCTCGATaGACGGGTGCTGGTGACTTG +
Preference number: 2 (lower is better)
Translates to: CQGGCFSPSCFRSIILFFEEFPR*TGAGDL
Trigger: CAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTC...AAAGAACAAGATTATCGACCTAAAGCAACTGGGAGAAAAACACCCACCTTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR GCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACACAGCTTCACACAGAGTaGTCCAAAGTAAAAGCCCAT +
Preference number: 2 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTQLHTE*SKVKAH
Trigger: ATGGGCTTTTACTTTGGAGCACTCTGTGTGAAGCTG...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR-3UTR GCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGCAGCTTCACACAGAGTaGTCCAAAGTAAAAGCCCAT +
Preference number: 2 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLQLHTE*SKVKAH
Trigger: ATGGGCTTTTACTTTGGAGCACTCTGTGTGAAGCTG...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR-3UTR GCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAGGATTGACAACATTGTaGATCCTGTATTCAGACAAT +
Preference number: 2 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTGLTTL*ILYSDN
Trigger: ATTGTCTGAATACAGGATGCACAATGTTGTCAATCC...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR TCA 72 bp AGGGGAAGAGGAATTCCCTCGATGCACGGGTGCTGGTaGCTTGGTCACTCGCTGTTGCCTGTCAGCTCTGGC +
Preference number: 3 (lower is better)
Translates to: RGRGIPSMHGCW*LGHSLLPVSSG
Trigger: GCCAGAGCTGACAGGCAACAGCGAGTGACCAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTCTTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR CAA 90 bp CTTGTTCTTTGGTGTAACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCACGGGTGCTGGTGACTaGGTCACTCGCTGTTGCCTG +
Preference number: 3 (lower is better)
Translates to: LVLWCNGWPGTVGWNTKTTGAGD*VTRCCL
Trigger: CAGGCAACAGCGAGTGACCAAGTCACCAGCACCCGT...GGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTTACACCAAAGAACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR CCA 72 bp ATGTACTCCCTGGGCCAGCATCCTCTGTACCAACCCTaGGTGAAGCTGGTGAGCAGGCCTAACCATAGGGAC +
Preference number: 3 (lower is better)
Translates to: MYSLGQHPLYQP*VKLVSRPNHRD
Trigger: GTCCCTATGGTTAGGCCTGCTCACCAGCTTCACCCAGGGTTGGTACAGAGGATGCTGGCCCAGGGAGTACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR CAA 90 bp CTTGTTCTTTGGTGTAACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCCTTGGTCACTCGCTGTaGCCTGTCAGCTCTGGCCAA +
Preference number: 3 (lower is better)
Translates to: LVLWCNGWPGTVGWNTKTLGHSL*PVSSGQ
Trigger: TTGGCCAGAGCTGACAGGCAACAGCGAGTGACCAAG...GGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTTACACCAAAGAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR CAA 90 bp CTTGTTCTTTGGTGTAACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCGATGCTGGCTCCTCCTaGCTTTTCTCTTTGCTCTCG +
Preference number: 3 (lower is better)
Translates to: LVLWCNGWPGTVGWNTKTDAGSS*LFSLLS
Trigger: CGAGAGCAAAGAGAAAAGCAAGGAGGAGCCAGCATC...GGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTTACACCAAAGAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR CCA 72 bp TGGGAGAAGAGTCTCGATCGGCACTGGGTACAGAGCTaGATGACAGGAGGTTTTCTTCACTGGCCTTCTGAG +
Preference number: 3 (lower is better)
Translates to: WEKSLDRHWVQS*MTGGFLHWPSE
Trigger: CTCAGAAGGCCAGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTGCCGATCGAGACTCTTCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR CCA 72 bp TTGGTGGACAGGGCGGAGAAAAGGTGTTGTAGGAACTaGGGATGCCAAGGTGGGTGTTTTTCTCCCAGTTGC +
Preference number: 3 (lower is better)
Translates to: LVDRAEKRCCRN*GCQGGCFSPSC
Trigger: GCAACTGGGAGAAAAACACCCACCTTGGCATCCCCAGTTCCTACAACACCTTTTCTCCGCCCTGTCCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR CCA 72 bp GTTCTTTGGTGTAACGGTTGGCCTGGGACAGTGGGGTaGAACACGAAGACCTCTGTAATGCTGACAGTTTGG +
Preference number: 3 (lower is better)
Translates to: VLWCNGWPGTVG*NTKTSVMLTVW
Trigger: CCAAACTGTCAGCATTACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTTACACCAAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR CAA 90 bp CTTGTTCTTTGGTGTAACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCTCCTTGCTTTTCTCTTaGCTCTCGTACATCTTACGA +
Preference number: 3 (lower is better)
Translates to: LVLWCNGWPGTVGWNTKTSLLFS*LSYILR
Trigger: TCGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGGA...GGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTTACACCAAAGAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR GCA 72 bp GGCCTTCTGAGTATCCTCTTTACTGTCACCAAGAGCTaGTTTTCCAGATGCTGGCTCCTCCTTGCTTTTCTC +
Preference number: 3 (lower is better)
Translates to: GLLSILFTVTKS*FSRCWLLLAFL
Trigger: GAGAAAAGCAAGGAGGAGCCAGCATCTGGAAAAGCAGCTCTTGGTGACAGTAAAGAGGATACTCAGAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR-3UTR CAA 90 bp CTTGTTCTTTGGTGTAACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCTGTAATGCTGACAGTTaGGAATTTGTAGTGGGAGAA +
Preference number: 3 (lower is better)
Translates to: LVLWCNGWPGTVGWNTKTCNADS*EFVVGE
Trigger: TTCTCCCACTACAAATTCCAAACTGTCAGCATTACA...GGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTTACACCAAAGAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
3UTR GCA 72 bp TTAAGATCCTTCCATCATAATGCGGACCACACCAGATaGATGGGTTCCACCAAACAGCTTCACACAGAGTGC +
Preference number: 3 (lower is better)
Translates to: LRSFHHNADHTR*MGSTKQLHTEC
Trigger: GCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAAGGATCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR GCA 72 bp AGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTaGTCCAAAGTAAAAGCCCATAAACCAACCCGAGAT +
Preference number: 3 (lower is better)
Translates to: RCMGSTKQLHTE*SKVKAHKPTRD
Trigger: ATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR CCA 72 bp GCATCCTGTATTCAGACAATGTACACTCCACTCGACTaGTTAAGATCCTTCCATCATAATGCGGACCACACC +
Preference number: 3 (lower is better)
Translates to: ASCIQTMYTPLD*LRSFHHNADHT
Trigger: GGTGTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
3UTR GCA 72 bp AACTGGGGATGCCAAGGTGGGTGTTTTTCTCCCAGTTaGTTTAGGTCGATAATCTTGTTCTTTGGTGTAACG +
Preference number: 3 (lower is better)
Translates to: NWGCQGGCFSPS*FRSIILFFGVT
Trigger: CGTTACACCAAAGAACAAGATTATCGACCTAAAGCAACTGGGAGAAAAACACCCACCTTGGCATCCCCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp GCAGCAGGGGCAGGGGAAGAGGAATTCCCTCGATGCACGGGTGCTGGTGACTTGCGGGTGCTGGTGACTTaGTCACTCGCTGTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: AAGAGEEEFPRCTGAGDLRVLVT*SLAVAC
Trigger: ACAGGCAACAGCGAGTGACCAAGTCACCAGCACCCG...CAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTCTTCCCCTGCCCCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR TCA 90 bp GAGGAATTCCCTCGATGCACGGGTGCTGGTGACTTGGTCACTCGCTGTTGCCTGGGCTCATCTGGGCTGTaGTGGGGCTCATGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: EEFPRCTGAGDLVTRCCLGSSGL*WGSWVC
Trigger: GCAAACCCATGAGCCCCATCACAGCCCAGATGAGCC...CAGGCAACAGCGAGTGACCAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCATGCTCTGCACTCGGTaGCTCCGCCGCTCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCMLCTR*LRRSAA
Trigger: GGCCGCCGAGCGGCGGAGGCACCGAGTGCAGAGCAT...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330125.10
ENST00000344710.9
CDS-3UTR CCA 90 bp GGCCTAACCATAGGGACATGGGGGACAAGGGGAACTTGGTGGACAGGGCGGAGATCCAGCTGGCTCATCTaGGCTGTGATGGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: GLTIGTWGTRGTWWTGRRSSWLI*AVMGLM
Trigger: CATGAGCCCCATCACAGCCCAGATGAGCCAGCTGGA...TCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR TCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTCATGTGGGGCAGGCCTaGCCGGCTGGGCACGTTCTG +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSHVGQA*PAGHVL
Trigger: CAGAACGTGCCCAGCCGGTCAGGCCTGCCCCACATG...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGCATGTGGGGCAGGCCTaGCCGGCTGGGCACGTTCTG +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEHVGQA*PAGHVL
Trigger: CAGAACGTGCCCAGCCGGTCAGGCCTGCCCCACATG...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GCAGCAGGGGCAGGGGAAGAGGAATTCCCTCGATGCACGGGTGCTGGTGACTTGAGTCTCGATCGGCACTaGGTACAGAGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: AAGAGEEEFPRCTGAGDLSLDRH*VQSWMT
Trigger: TGTCATCCAGCTCTGTACCCAGTGCCGATCGAGACT...CAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTCTTCCCCTGCCCCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp GCAGCAGGGGCAGGGGAAGAGGAATTCCCTCGATGCACGGGTGCTGGTGACTTGACAAGGGGAACTTGGTaGACAGGGCGGAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: AAGAGEEEFPRCTGAGDLTRGTW*TGRRKG
Trigger: ACCTTTTCTCCGCCCTGTCCACCAAGTTCCCCTTGT...CAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTCTTCCCCTGCCCCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGCTGCTCCTCTGGCTaGGGCGATGCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQSCSSG*GDAPAG
Trigger: CCCAGCTGGAGCATCGCCCCAGCCAGAGGAGCAGCT...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTACAATGCTCTGCACTaGGGGGCGGCCGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGYNALH*GAAGRR
Trigger: CCTGCGGCCGGCCGCCCCTCAGTGCAGAGCATTGTA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397525.5
CDS-3UTR GCA 90 bp GCAGCAGGGGCAGGGGAAGAGGAATTCCCTCGATGCACGGGTGCTGGTGACTTGACTGTCACCAAGAGCTaGTTTTCCAGATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AAGAGEEEFPRCTGAGDLTVTKS*FSRCWL
Trigger: GAGCCAGCATCTGGAAAAGCAGCTCTTGGTGACAGT...CAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTCTTCCCCTGCCCCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp CAACCCTGGGTGAAGCTGGTGAGCAGGCCTAACCATAGGGACATGGGGGACAAGCCTGGGACAGTGGGGTaGAACACGAAGACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: QPWVKLVSRPNHRDMGDKPGTVG*NTKTSV
Trigger: TACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGG...CTTGTCCCCCATGTCCCTATGGTTAGGCCTGCTCACCAGCTTCACCCAGGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTGGGCGATGCTCCAGCTaGGAGTGCATGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSGRCSS*ECMWGR
Trigger: CCTGCCCCACATGCACTCCCAGCTGGAGCATCGCCC...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGAGCTGCTCCTCTGGCTaGGGCGATGCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTESCSSG*GDAPAG
Trigger: CCCAGCTGGAGCATCGCCCCAGCCAGAGGAGCAGCT...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACGGGGAGCTGCTCCTCTaGCTGGGGCGATGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHGELLL*LGRCSS
Trigger: GCTGGAGCATCGCCCCAGCCAGAGGAGCAGCTCCCC...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGGACAGGGCGGAGAAAAGGTGTTGTAGGAACTGGGGATGCCAAGGTGGGTGTTATGCACGGGTGCTGGTaGCTTGGTCACTCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: WTGRRKGVVGTGDAKVGVMHGCW*LGHSLL
Trigger: CAACAGCGAGTGACCAAGTCACCAGCACCCGTGCAT...AACACCCACCTTGGCATCCCCAGTTCCTACAACACCTTTTCTCCGCCCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAATGCTCTGCACTCGGTaGCTCCGCCGCTCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTMLCTR*LRRSAA
Trigger: GGCCGCCGAGCGGCGGAGGCACCGAGTGCAGAGCAT...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330125.10
ENST00000344710.9
CDS-3UTR GCA 90 bp CAACCCTGGGTGAAGCTGGTGAGCAGGCCTAACCATAGGGACATGGGGGACAAGTGGGGCTCATGGGTTTaGGCATGCCTTGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: QPWVKLVSRPNHRDMGDKWGSWV*ACLGMD
Trigger: ATCCATTCCAAGGCATGCGCAAACCCATGAGCCCCA...CTTGTCCCCCATGTCCCTATGGTTAGGCCTGCTCACCAGCTTCACCCAGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGCTCTGGCTGGGGCGATaGTCCAGCTGGGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTELWLGR*SSWECM
Trigger: CATGCACTCCCAGCTGGAGCATCGCCCCAGCCAGAG...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTCTCTGGCTGGGGCGATaGTCCAGCTGGGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSLWLGR*SSWECM
Trigger: CATGCACTCCCAGCTGGAGCATCGCCCCAGCCAGAG...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGGGGTCCTGCCCAGTGTaGCACCACAGGTCCGGGCTT +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGGSCPV*HHRSGL
Trigger: AAGCCCGGACCTGTGGTGGCACACTGGGCAGGACCC...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CGGCACTGGGTACAGAGCTGGATGACAGGAGGTTTTCTTCACTGGCCTTCTGAGGTTGGCCTGGGACAGTaGGGTGGAACACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: RHWVQSWMTGGFLHWPSEVGLGQ*GGTRRP
Trigger: AGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAAC...CTCAGAAGGCCAGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp TGGACAGGGCGGAGAAAAGGTGTTGTAGGAACTGGGGATGCCAAGGTGGGTGTTCTTTGGTGTAACGGTTaGCCTGGGACAGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WTGRRKGVVGTGDAKVGVLWCNG*PGTVGW
Trigger: CCACCCCACTGTCCCAGGCCAACCGTTACACCAAAG...AACACCCACCTTGGCATCCCCAGTTCCTACAACACCTTTTCTCCGCCCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp AACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCTCTGTAATGCTGACACCTCTGTACCAACCCTaGGTGAAGCTGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: NGWPGTVGWNTKTSVMLTPLYQP*VKLVSR
Trigger: CCTGCTCACCAGCTTCACCCAGGGTTGGTACAGAGG...TGTCAGCATTACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCAGGCCTGACCGGCTaGGCACGTTCTGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSAGLTG*ARSEGL
Trigger: CAACCCCTCAGAACGTGCCCAGCCGGTCAGGCCTGC...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGGGCGATGCTCCAGCTaGGAGTGCATGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTGRCSS*ECMWGR
Trigger: CCTGCCCCACATGCACTCCCAGCTGGAGCATCGCCC...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTCCACCCCGACCGGCTTaGGCTGTCTCTCTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSPPRPA*AVSLQP
Trigger: CGGCTGAAGAGAGACAGCCCAAGCCGGTCGGGGTGG...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330125.10
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTACAGCGGCTGTCACGTaGCAGCCCCCTCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSTAAVT*QPPPKL
Trigger: GAGCTTTGGAGGGGGCTGCCACGTGACAGCCGCTGT...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
3UTR CAA 72 bp GAAGAGGAATTCCCTCGATGCACGGGTGCTGGTGACTaGGTCACTCGCTGTTGCCTGTCAGCTCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: EEEFPRCTGAGD*VTRCCLSALAK
Trigger: TTTGGCCAGAGCTGACAGGCAACAGCGAGTGACCAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR TCA 90 bp GGCCTAACCATAGGGACATGGGGGACAAGGGGAACTTGGTGGACAGGGCGGAGACATCTTACGAATCACTaGGGTAGGGGTAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLTIGTWGTRGTWWTGRRHLTNH*GRGKGR
Trigger: CCTTCCTTTACCCCTACCTCAGTGATTCGTAAGATG...TCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGCCGCAGGCTCCTGTaGAAGGATGACCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQSRRLL*KDDLHF
Trigger: GAAGTGGAGGTCATCCTTGCACAGGAGCCTGCGGCT...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CAACCCTGGGTGAAGCTGGTGAGCAGGCCTAACCATAGGGACATGGGGGACAAGTCTAAAGCTGCCTGTTaGAACTCCAGCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: QPWVKLVSRPNHRDMGDKSKAAC*NSSWLI
Trigger: GATGAGCCAGCTGGAGTTGCAACAGGCAGCTTTAGA...CTTGTCCCCCATGTCCCTATGGTTAGGCCTGCTCACCAGCTTCACCCAGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAACGCTGACAGCTGCTaGATGGGAACCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQNADSC*MGTRAW
Trigger: CCAGGCTCTGGTTCCCATGCAGCAGCTGTCAGCGTT...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCGATGAAGCAGGGTCCTaGCCAGTGTGCCACCACAGG +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCDEAGS*PVCHHR
Trigger: CCTGTGGTGGCACACTGGGCAGGACCCTGCTTCATC...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGCCTAACCATAGGGACATGGGGGACAAGGGGAACTTGGTGGACAGGGCGGAGATGCTTTTCCAGATGCTaGCTCCTCCTTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GLTIGTWGTRGTWWTGRRCFSRC*LLLAFL
Trigger: GAGAAAAGCAAGGAGGAGCCAGCATCTGGAAAAGCA...TCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAACCTCTGTACCAACCCTaGGTGAAGCTGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQPLYQP*VKLVSR
Trigger: CCTGCTCACCAGCTTCACCCAGGGTTGGTACAGAGG...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAACAGCGGCTGTCACGTaGCAGCCCCCTCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVTAAVT*QPPPKL
Trigger: GAGCTTTGGAGGGGGCTGCCACGTGACAGCCGCTGT...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAACAGCGGCTGTCACGTaGCAGCCCCCTCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTTAAVT*QPPPKL
Trigger: GAGCTTTGGAGGGGGCTGCCACGTGACAGCCGCTGT...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACATCCCTTGGCACTTCCTaGTCAGCCGCAGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTSLGTS*SAAGSC
Trigger: ACAGGAGCCTGCGGCTGATCAGGAAGTGCCAAGGGA...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp GGGGCAGGGGAAGAGGAATTCCCTCGATGCACGGGTGCTGGTGACTTGGTCACTTCTTCACTGGCCTTCTaGGTATCCTCTTTACTGTCA +
Preference number: 4 (lower is better)
Translates to: GAGEEEFPRCTGAGDLVTSSLAF*VSSLLS
Trigger: TGACAGTAAAGAGGATACTCAGAAGGCCAGTGAAGA...AGTGACCAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTCTTCCCCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR TCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTGGGTTGTCTGAACGCTaGCAGCTGCTGCATGGGAAC +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSGLSER*QLLHGN
Trigger: GTTCCCATGCAGCAGCTGTCAGCGTTCAGACAACCC...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATGTGGGGCAGGCCTaGCCGGCTGGGCACGTTCTG +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFHVGQA*PAGHVL
Trigger: CAGAACGTGCCCAGCCGGTCAGGCCTGCCCCACATG...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACAGGTCCGGGCTTAGTTaGGTCTGCCTGCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHRSGLS*VCLPCS
Trigger: TGAGCAGGGCAGGCAGACTCAACTAAGCCCGGACCT...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTAGGTCCGGGCTTAGTTaGGTCTGCCTGCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSRSGLS*VCLPCS
Trigger: TGAGCAGGGCAGGCAGACTCAACTAAGCCCGGACCT...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACGGCTCATCTGGGCTGTaGTGGGGCTCATGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHGSSGL*WGSWVC
Trigger: GCAAACCCATGAGCCCCATCACAGCCCAGATGAGCC...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGGCTCATCTGGGCTGTaGTGGGGCTCATGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTGSSGL*WGSWVC
Trigger: GCAAACCCATGAGCCCCATCACAGCCCAGATGAGCC...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CTGGTGAGCAGGCCTAACCATAGGGACATGGGGGACAAGGGGAACTTGGTGGACCTGGTAGAAGTTTGCTaGCTGTACAGCAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: LVSRPNHRDMGDKGNLVDLVEVC*LYSKVM
Trigger: CATGACCTTGCTGTACAGGCAGCAAACTTCTACCAG...GTCCACCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAGGCCTGCTCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTCCAGAGCCTGGAGGATaGAGAACTGAGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSPEPGG*RTERCS
Trigger: GCTACAGCGCTCAGTTCTGCATCCTCCAGGCTCTGG...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCCTGAACGCTGACAGCTaGTGCATGGGAACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCLNADS*CMGTRA
Trigger: GGCTCTGGTTCCCATGCAGCAGCTGTCAGCGTTCAG...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACGATGAAGCAGGGTCCTaGCCAGTGTGCCACCACAGG +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHDEAGS*PVCHHR
Trigger: CCTGTGGTGGCACACTGGGCAGGACCCTGCTTCATC...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGATGAAGCAGGGTCCTaGCCAGTGTGCCACCACAGG +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTDEAGS*PVCHHR
Trigger: CCTGTGGTGGCACACTGGGCAGGACCCTGCTTCATC...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAGCGGACCACACCAGATaGATGGGTTCCACCAAACAG +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQADHTR*MGSTKQ
Trigger: CTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGC...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGCTCCTTGGTCTACAATaGTCTGCACTGAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTELLGLQ*SALRGG
Trigger: GCCGCCCCTCAGTGCAGAGCATTGTAGACCAAGGAG...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397525.5
CDS-3UTR GCA 90 bp TGGACAGGGCGGAGAAAAGGTGTTGTAGGAACTGGGGATGCCAAGGTGGGTGTTTTGGTCACTCGCTGTTaGCTGTCAGCTCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: WTGRRKGVVGTGDAKVGVLVTRC*LSALAK
Trigger: TTTGGCCAGAGCTGACAGGCAACAGCGAGTGACCAA...AACACCCACCTTGGCATCCCCAGTTCCTACAACACCTTTTCTCCGCCCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGCGATGGGGGCATTTaGAGGCAGGAGGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQSDGGI*RQEASS
Trigger: TGAAGAAGCCTCCTGCCTCCAAATGCCCCCATCGCT...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCAGGGACAGGCTGGCCTaGAATCTCAGCAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCRDRLA*NLSRGH
Trigger: ATGTCCCCTGCTGAGATTCCAGGCCAGCCTGTCCCT...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397525.5
CDS-3UTR CCA 90 bp CTTTGGTGTAACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCTCTGTAGGTTTGCGCATGCCTTaGAATGGATCTCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LWCNGWPGTVGWNTKTSVGLRMP*NGSPSS
Trigger: GCTACTCGGAGATCCATTCCAAGGCATGCGCAAACC...TACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTTACACCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp CGGCACTGGGTACAGAGCTGGATGACAGGAGGTTTTCTTCACTGGCCTTCTGAGGGTTCTGTCCACCTGTaGTTTGCCAAAACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RHWVQSWMTGGFLHWPSEGSVHL*FAKTRL
Trigger: CAGCCTGGTTTTGGCAAACCACAGGTGGACAGAACC...CTCAGAAGGCCAGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGCGGGTGCTGGTGACTTaGTCACTCGCTGTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTERVLVT*SLAVAC
Trigger: ACAGGCAACAGCGAGTGACCAAGTCACCAGCACCCG...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTGTTGGCCTGGGACAGTaGGGTGGAACACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSVGLGQ*GGTRRP
Trigger: AGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAAC...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp AACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCTCTGTAATGCTGACACTAACCATAGGGACATaGGGGACAAGGGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: NGWPGTVGWNTKTSVMLTLTIGT*GTRGTW
Trigger: CCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAG...TGTCAGCATTACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGCCTCTGTACCAACCCTaGGTGAAGCTGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEPLYQP*VKLVSR
Trigger: CCTGCTCACCAGCTTCACCCAGGGTTGGTACAGAGG...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACGCAGGCCTGACCGGCTaGGCACGTTCTGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHAGLTG*ARSEGL
Trigger: CAACCCCTCAGAACGTGCCCAGCCGGTCAGGCCTGC...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACGGGCGATGCTCCAGCTaGGAGTGCATGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHGRCSS*ECMWGR
Trigger: CCTGCCCCACATGCACTCCCAGCTGGAGCATCGCCC...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGGGGAGCTGCTCCTCTaGCTGGGGCGATGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLGELLL*LGRCSS
Trigger: GCTGGAGCATCGCCCCAGCCAGAGGAGCAGCTCCCC...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGGCTGGATCGGCTTCCTaGTCTGCTCGGGTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEAGSAS*SARVRE
Trigger: TTCTCTAACCCGAGCAGATCAGGAAGCCGATCCAGC...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAGAGGCTGCTCGAGTTTaGAACACCTGTGACAAGGGA +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQEAARV*NTCDKG
Trigger: TCCCTTGTCACAGGTGTTTCAAACTCGAGCAGCCTC...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTATCATCTGCTGGGCTGTaGTGGGGCTCATGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVSSAGL*WGSWVC
Trigger: GCAAACCCATGAGCCCCATCACAGCCCAGCAGATGA...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS-3UTR TCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTATGCACGGGTGCTGGTaGCTTGGTCACTCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSMHGCW*LGHSLL
Trigger: CAACAGCGAGTGACCAAGTCACCAGCACCCGTGCAT...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTCGGCTGACTTTGGGCTaGGAAGGCAAAGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSRLTLG*EGKVPL
Trigger: AAGTGGGACTTTGCCTTCTCAGCCCAAAGTCAGCCG...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330125.10
ENST00000397525.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGAAGTCTCCTGGGGACTaGTCAGGCAAGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEKSPGD*SGKTAS
Trigger: GGATGCTGTCTTGCCTGAGCAGTCCCCAGGAGACTT...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCAAGTCTCCTGGGGACTaGTCAGGCAAGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCKSPGD*SGKTAS
Trigger: GGATGCTGTCTTGCCTGAGCAGTCCCCAGGAGACTT...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGGGAGAGAGGATGGCTTaGTCCAGACCTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEGERMA*SRPASL
Trigger: GAGACTTGCAGGTCTGGAGCAAGCCATCCTCTCTCC...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CTTGTTCTTTGGTGTAACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCTGTCCACCTGTGGTTTaGCAAAACCAGGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LVLWCNGWPGTVGWNTKTCPPVV*QNQAGR
Trigger: TCTACCAGCCTGGTTTTGGCAAACCACAGGTGGACA...GGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTTACACCAAAGAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGGAGGAATTCCCTCGATaGACGGGTGCTGGTGACTTG +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEEEFPR*TGAGDL
Trigger: CAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTC...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTACCAGAGCCTGGAGGATaGAGAACTGAGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVPEPGG*RTERCS
Trigger: GCTACAGCGCTCAGTTCTGCATCCTCCAGGCTCTGG...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACAACGCTGACAGCTGCTaGATGGGAACCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHNADSC*MGTRAW
Trigger: CCAGGCTCTGGTTCCCATGCAGCAGCTGTCAGCGTT...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAAACGCTGACAGCTGCTaGATGGGAACCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVNADSC*MGTRAW
Trigger: CCAGGCTCTGGTTCCCATGCAGCAGCTGTCAGCGTT...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACACTGAACGCTGACAGCTaGTGCATGGGAACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTLNADS*CMGTRA
Trigger: GGCTCTGGTTCCCATGCAGCAGCTGTCAGCGTTCAG...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGCTGAACGCTGACAGCTaGTGCATGGGAACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGLNADS*CMGTRA
Trigger: GGCTCTGGTTCCCATGCAGCAGCTGTCAGCGTTCAG...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGATGGAGGGCAGGGGTTaGTGTAGCACATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEMEGRG*CSTSEP
Trigger: TGGCTCAGATGTGCTACAGCAACCCCTGCCCTCCAT...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGGCGGACCACACCAGATaGATGGGTTCCACCAAACAG +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEADHTR*MGSTKQ
Trigger: CTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGC...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAACTCAGAACCCTTAGGTaGCACCTCTTGGTGAGGACA +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQLRTLR*HLLVRT
Trigger: TGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAG...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGTGGATCTACTATCCTaGGCACCAGGGAAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSVDLLS*APGKAG
Trigger: ACCGGCCTTCCCTGGTGCGCAGGATAGTAGATCCAC...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTCAAGACAGCATCCCTTaGCACTTCCTGATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSQDSIP*HFLISR
Trigger: GCGGCTGATCAGGAAGTGCCAAGGGATGCTGTCTTG...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGGTCCAGGAGAGAGGATaGCTTGCTCCAGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEVQERG*LAPDLQ
Trigger: TTGCAGGTCTGGAGCAAGCCATCCTCTCTCCTGGAC...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAAGCTGGCTCATCTGCTaGGCTGTGATGGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVSWLIC*AVMGLM
Trigger: CATGAGCCCCATCACAGCCCAGCAGATGAGCCAGCT...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACACGGGTGCTGGTGACTTaGTCACTCGCTGTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTRVLVT*SLAVAC
Trigger: ACAGGCAACAGCGAGTGACCAAGTCACCAGCACCCG...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACGTTGGCCTGGGACAGTaGGGTGGAACACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHVGLGQ*GGTRRP
Trigger: AGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAAC...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGTTGGCCTGGGACAGTaGGGTGGAACACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSVGLGQ*GGTRRP
Trigger: AGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAAC...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGCTTTGGTGTAACGGTTaGCCTGGGACAGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGLWCNG*PGTVGW
Trigger: CCACCCCACTGTCCCAGGCCAACCGTTACACCAAAG...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CAACCCTGGGTGAAGCTGGTGAGCAGGCCTAACCATAGGGACATGGGGGACAAGGATAATCTTGTTCTTTaGTGTAACGGTTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QPWVKLVSRPNHRDMGDKDNLVL*CNGWPG
Trigger: CCCAGGCCAACCGTTACACCAAAGAACAAGATTATC...CTTGTCCCCCATGTCCCTATGGTTAGGCCTGCTCACCAGCTTCACCCAGGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAACTGGGGATGCCAAGGTaGGTGTTTTTCTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQLGMPR*VFFSQL
Trigger: CAACTGGGAGAAAAACACCCACCTTGGCATCCCCAG...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp AGTCTCGATCGGCACTGGGTACAGAGCTGGATGACAGGAGGTTTTCTTCACTGGAGGTGTTGTAGGAACTaGGGATGCCAAGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SLDRHWVQSWMTGGFLHWRCCRN*GCQGGC
Trigger: ACACCCACCTTGGCATCCCCAGTTCCTACAACACCT...CCAGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTGCCGATCGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGGGGACAAGGGGAACTTaGTGGACAGGGCGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEGTRGT*WTGRRK
Trigger: TTTTCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCC...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAACTAACCATAGGGACATaGGGGACAAGGGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQLTIGT*GTRGTW
Trigger: CCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAG...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGCCTCTGTACCAACCCTaGGTGAAGCTGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGPLYQP*VKLVSR
Trigger: CCTGCTCACCAGCTTCACCCAGGGTTGGTACAGAGG...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTGTGGATGTACTCCCTaGGCCAGCATCCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSCGCTP*ASILCT
Trigger: GGTACAGAGGATGCTGGCCCAGGGAGTACATCCACA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGAGGGCTGACCCAGGATaGGGCCAGATATTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTERADPG*GQIFPV
Trigger: TACAGGGAATATCTGGCCCCATCCTGGGTCAGCCCT...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCGCAGGCCTGACCGGCTaGGCACGTTCTGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFAGLTG*ARSEGL
Trigger: CAACCCCTCAGAACGTGCCCAGCCGGTCAGGCCTGC...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGCAGGCCTGACCGGCTaGGCACGTTCTGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLAGLTG*ARSEGL
Trigger: CAACCCCTCAGAACGTGCCCAGCCGGTCAGGCCTGC...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAGGGGAGCTGCTCCTCTaGCTGGGGCGATGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSGELLL*LGRCSS
Trigger: GCTGGAGCATCGCCCCAGCCAGAGGAGCAGCTCCCC...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTACTGAGCCAAACCATTTaGCAAGGCCCACAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVLSQTI*QGPQGS
Trigger: GCTCCCCTGTGGGCCTTGCCAAATGGTTTGGCTCAG...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACACTGAGCCAAACCATTTaGCAAGGCCCACAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTLSQTI*QGPQGS
Trigger: GCTCCCCTGTGGGCCTTGCCAAATGGTTTGGCTCAG...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACTCCAGCTGGCTCATCTaGGCTGTGATGGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHSSWLI*AVMGLM
Trigger: CATGAGCCCCATCACAGCCCAGATGAGCCAGCTGGA...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCGCTCCTGTGCAAGGATaGCCTCCACTTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCAPVQG*PPLHPL
Trigger: AAGAGGATGAAGTGGAGGTCATCCTTGCACAGGAGC...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTCCGACTGGCAGAGACTaGCCCTTCTCCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSPTGRD*PFSQNI
Trigger: GATGTTTTGGGAGAAGGGTCAGTCTCTGCCAGTCGG...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACGCTGGATCGGCTTCCTaGTCTGCTCGGGTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHAGSAS*SARVRE
Trigger: TTCTCTAACCCGAGCAGATCAGGAAGCCGATCCAGC...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGCTGGATCGGCTTCCTaGTCTGCTCGGGTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVAGSAS*SARVRE
Trigger: TTCTCTAACCCGAGCAGATCAGGAAGCCGATCCAGC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTGGATCGGCTTCCTaGTCTGCTCGGGTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSAGSAS*SARVRE
Trigger: TTCTCTAACCCGAGCAGATCAGGAAGCCGATCCAGC...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGAGTTTGAAACACCTGTaGCAAGGGAGGAGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTESLKHL*QGRRGC
Trigger: GCACCCTCTCCTCCCTTGTCACAGGTGTTTCAAACT...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGACCCAGAAGTTCGCTaGCTTTGGGCTGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVDPEVR*LWAEKA
Trigger: TGCCTTCTCAGCCCAAAGTCAGCGAACTTCTGGGTC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397523.5
CDS-3UTR GCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACACTCCTTGGTCTACAATaGTCTGCACTCGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTLLGLQ*SALGAS
Trigger: GGAGGCACCGAGTGCAGAGCATTGTAGACCAAGGAG...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330125.10
ENST00000344710.9
CDS-3UTR GCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGAAGTCTCCTGGGGACTaGTCAGGCAAGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGKSPGD*SGKTAS
Trigger: GGATGCTGTCTTGCCTGAGCAGTCCCCAGGAGACTT...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTAAGTCTCCTGGGGACTaGTCAGGCAAGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSKSPGD*SGKTAS
Trigger: GGATGCTGTCTTGCCTGAGCAGTCCCCAGGAGACTT...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGGAGAGAGGATGGCTTaGTCCAGACCTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTGERMA*SRPASL
Trigger: GAGACTTGCAGGTCTGGAGCAAGCCATCCTCTCTCC...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGGAGAGAGGATGGCTTaGTCCAGACCTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSGERMA*SRPASL
Trigger: GAGACTTGCAGGTCTGGAGCAAGCCATCCTCTCTCC...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCGGATCTCCGAGTAGCTaGTGTGGTCCTGGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCGSPSS*CGPGVK
Trigger: TTTCACACCAGGACCACAGCAGCTACTCGGAGATCC...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAATCATGGGTTTGCGCATaGCTTGGAATGGATCTCCGA +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQSWVCA*LGMDLR
Trigger: TCGGAGATCCATTCCAAGGCATGCGCAAACCCATGA...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGGGGCTCATGGGTTTaGGCATGCCTTGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEWGSWV*ACLGMD
Trigger: ATCCATTCCAAGGCATGCGCAAACCCATGAGCCCCA...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGGCTGGTAGAAGTTTaGTGCCTGTACAGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQRLVEV*CLYSKV
Trigger: GACCTTGCTGTACAGGCAGCAAACTTCTACCAGCCT...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp AGTCTCGATCGGCACTGGGTACAGAGCTGGATGACAGGAGGTTTTCTTCACTGGAGGCTGGTAGAAGTTTaGTGCCTGTACAGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: SLDRHWVQSWMTGGFLHWRLVEV*CLYSKV
Trigger: GACCTTGCTGTACAGGCAGCAAACTTCTACCAGCCT...CCAGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTGCCGATCGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp AGGAACTGGGGATGCCAAGGTGGGTGTTTTTCTCCCAGTTGCTTTAGGTCGATAGAGGAATTCCCTCGATaGACGGGTGCTGGTGACTTG +
Preference number: 4 (lower is better)
Translates to: RNWGCQGGCFSPSCFRSIEEFPR*TGAGDL
Trigger: CAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTC...TATCGACCTAAAGCAACTGGGAGAAAAACACCCACCTTGGCATCCCCAGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCTGCACCATTGCCAGATaGAGAGGTGTTCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCCTIAR*RGVPGR
Trigger: TCGTCCTGGAACACCTCTGCATCTGGCAATGGTGCA...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCACTGAGCGCTGTAGCTaGTGTTGCACCATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCTERCS*CCTIAR
Trigger: TCTGGCAATGGTGCAACAGCAGCTACAGCGCTCAGT...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCTCTGGCTGGGGCGATaGTCCAGCTGGGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFLWLGR*SSWECM
Trigger: CATGCACTCCCAGCTGGAGCATCGCCCCAGCCAGAG...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAATGGAGGGCAGGGGTTaGTGTAGCACATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVMEGRG*CSTSEP
Trigger: TGGCTCAGATGTGCTACAGCAACCCCTGCCCTCCAT...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAATTAGTTGAGTCTGCCTaGCCTGCTCACTGTCGGTAT +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQLVESA*PAHCRY
Trigger: ATACCGACAGTGAGCAGGGCAGGCAGACTCAACTAA...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCGGGTCCTGCCCAGTGTaGCACCACAGGTCCGGGCTT +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIGSCPV*HHRSGL
Trigger: AAGCCCGGACCTGTGGTGGCACACTGGGCAGGACCC...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGCAAGACAGCATCCCTTaGCACTTCCTGATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGQDSIP*HFLISR
Trigger: GCGGCTGATCAGGAAGTGCCAAGGGATGCTGTCTTG...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCTTGACCCAAGACTGCTaGATCGGCTTCCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCLTQDC*IGFLIC
Trigger: GCAGATCAGGAAGCCGATCCAGCAGTCTTGGGTCAA...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACGTCCAGGAGAGAGGATaGCTTGCTCCAGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHVQERG*LAPDLQ
Trigger: TTGCAGGTCTGGAGCAAGCCATCCTCTCTCCTGGAC...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp AACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCTCTGTAATGCTGACACACTGGGTACAGAGCTaGATGACAGGAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NGWPGTVGWNTKTSVMLTHWVQS*MTGGFL
Trigger: AAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTG...TGTCAGCATTACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACCCTGGGACAGTGGGGTaGAACACGAAGACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHPGTVG*NTKTSV
Trigger: TACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGG...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGCCTGGGACAGTGGGGTaGAACACGAAGACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGPGTVG*NTKTSV
Trigger: TACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGG...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGCTGGGGATGCCAAGGTaGGTGTTTTTCTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTELGMPR*VFFSQL
Trigger: CAACTGGGAGAAAAACACCCACCTTGGCATCCCCAG...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGAGGTGTTGTAGGAACTaGGGATGCCAAGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTERCCRN*GCQGGC
Trigger: ACACCCACCTTGGCATCCCCAGTTCCTACAACACCT...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTACAAGGGGAACTTGGTaGACAGGGCGGAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSTRGTW*TGRRKG
Trigger: ACCTTTTCTCCGCCCTGTCCACCAAGTTCCCCTTGT...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCACAAGGGGAACTTGGTaGACAGGGCGGAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCTRGTW*TGRRKG
Trigger: ACCTTTTCTCCGCCCTGTCCACCAAGTTCCCCTTGT...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGGGACAAGGGGAACTTaGTGGACAGGGCGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVGTRGT*WTGRRK
Trigger: TTTTCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTGTGGATGTACTCCCTaGGCCAGCATCCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGCGCTP*ASILCT
Trigger: GGTACAGAGGATGCTGGCCCAGGGAGTACATCCACA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTATGTGGATGTACTCCCTaGGCCAGCATCCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVCGCTP*ASILCT
Trigger: GGTACAGAGGATGCTGGCCCAGGGAGTACATCCACA...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTACTTGGAAGATGCTGTaGATGTACTCCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSTWKML*MYSLGQ
Trigger: CTGGCCCAGGGAGTACATCCACAGCATCTTCCAAGT...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAGCTGCTCCTCTGGCTaGGGCGATGCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVSCSSG*GDAPAG
Trigger: CCCAGCTGGAGCATCGCCCCAGCCAGAGGAGCAGCT...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGTCCCTTGGCACTTCCTaGTCAGCCGCAGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLSLGTS*SAAGSC
Trigger: ACAGGAGCCTGCGGCTGATCAGGAAGTGCCAAGGGA...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACACTCTTCATGTGGTGTTaGCCCAAGACTGCTGGATCG +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTLFMWC*PKTAGS
Trigger: CGATCCAGCAGTCTTGGGTCAACACCACATGAAGAG...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTACTCTTCATGTGGTGTTaGCCCAAGACTGCTGGATCG +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVLFMWC*PKTAGS
Trigger: CGATCCAGCAGTCTTGGGTCAACACCACATGAAGAG...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGGCGAAGGTAGTCAGCTaGGGCTGCTCGAGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGAKVVS*GCSSLK
Trigger: TTTCAAACTCGAGCAGCCTCAGCTGACTACCTTCGC...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGGACAGGGCGGAGAAAAGGTGTTGTAGGAACTGGGGATGCCAAGGTGGGTGTTTGTGAAACCAATTGGTaGTGGTATTCTTGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: WTGRRKGVVGTGDAKVGVCETNW*WYSWAK
Trigger: CTTCGCCCAAGAATACCATCACCAATTGGTTTCACA...AACACCCACCTTGGCATCCCCAGTTCCTACAACACCTTTTCTCCGCCCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR TCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACGGGTTGTCTGAACGCTaGCAGCTGCTGCATGGGAAC +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHGLSER*QLLHGN
Trigger: GTTCCCATGCAGCAGCTGTCAGCGTTCAGACAACCC...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTTATCGCTAAGACGGTaGTCCTTCTCAAAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTELSLRR*SFSKVR
Trigger: CCGGACCTTTGAGAAGGATCACCGTCTTAGCGATAA...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTTATCGCTAAGACGGTaGTCCTTCTCAAAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSLSLRR*SFSKVR
Trigger: CCGGACCTTTGAGAAGGATCACCGTCTTAGCGATAA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCGATGGTTTCAGACTaGCTTGTGGGTCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGSMVSD*LVGPAE
Trigger: CTCTGCTGGACCCACAAGTCAGTCTGAAACCATCGA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACAGCCGCAGGCTCCTGTaGAAGGATGACCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHSRRLL*KDDLHF
Trigger: GAAGTGGAGGTCATCCTTGCACAGGAGCCTGCGGCT...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGGTGTTGACCCAAGACTaGTGGATCGGCTTCCTGATC +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGVLTQD*WIGFLI
Trigger: GATCAGGAAGCCGATCCAGCAGTCTTGGGTCAACAC...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGTGTTGACCCAAGACTaGTGGATCGGCTTCCTGATC +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVVLTQD*WIGFLI
Trigger: GATCAGGAAGCCGATCCAGCAGTCTTGGGTCAACAC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGTGTTGACCCAAGACTaGTGGATCGGCTTCCTGATC +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSVLTQD*WIGFLI
Trigger: GATCAGGAAGCCGATCCAGCAGTCTTGGGTCAACAC...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp AGGAACTGGGGATGCCAAGGTGGGTGTTTTTCTCCCAGTTGCTTTAGGTCGATAGGATCTCCGAGTAGCTaGTGTGGTCCTGGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: RNWGCQGGCFSPSCFRSIGSPSS*CGPGVK
Trigger: TTTCACACCAGGACCACAGCAGCTACTCGGAGATCC...TATCGACCTAAAGCAACTGGGAGAAAAACACCCACCTTGGCATCCCCAGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTCATGGGTTTGCGCATaGCTTGGAATGGATCTCCGA +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSSWVCA*LGMDLR
Trigger: TCGGAGATCCATTCCAAGGCATGCGCAAACCCATGA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACATGGGGCTCATGGGTTTaGGCATGCCTTGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTWGSWV*ACLGMD
Trigger: ATCCATTCCAAGGCATGCGCAAACCCATGAGCCCCA...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCAGGCTGGTAGAAGTTTaGTGCCTGTACAGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCRLVEV*CLYSKV
Trigger: GACCTTGCTGTACAGGCAGCAAACTTCTACCAGCCT...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGGGCAGGGGAAGAGGAATTCCCTCGATGCACGGGTGCTGGTGACTTGGTCACTTGTTTTTCTCCCAGTTaGTTTAGGTCGATAATCTTG +
Preference number: 4 (lower is better)
Translates to: GAGEEEFPRCTGAGDLVTCFSPS*FRSIIL
Trigger: CAAGATTATCGACCTAAAGCAACTGGGAGAAAAACA...AGTGACCAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTCTTCCCCTGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACACTGCTGTTGCACCATTaGCAGATGCAGAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTLLLHH*QMQRCS
Trigger: GGAACACCTCTGCATCTGGCAATGGTGCAACAGCAG...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTCTGCTGTTGCACCATTaGCAGATGCAGAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSLLLHH*QMQRCS
Trigger: GGAACACCTCTGCATCTGGCAATGGTGCAACAGCAG...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTACGCTGTAGCTGCTGTTaGACCATTGCCAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVRCSCC*TIARCR
Trigger: TCTGCATCTGGCAATGGTGCAACAGCAGCTACAGCG...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAACTGAGCGCTGTAGCTaGTGTTGCACCATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVTERCS*CCTIAR
Trigger: TCTGGCAATGGTGCAACAGCAGCTACAGCGCTCAGT...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAACTGAGCGCTGTAGCTaGTGTTGCACCATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTTERCS*CCTIAR
Trigger: TCTGGCAATGGTGCAACAGCAGCTACAGCGCTCAGT...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTCTGGCTGGGGCGATaGTCCAGCTGGGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKILWLGR*SSWECM
Trigger: CATGCACTCCCAGCTGGAGCATCGCCCCAGCCAGAG...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCTTAGTTGAGTCTGCCTaGCCTGCTCACTGTCGGTAT +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCLVESA*PAHCRY
Trigger: ATACCGACAGTGAGCAGGGCAGGCAGACTCAACTAA...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACCTCAGAACCCTTAGGTaGCACCTCTTGGTGAGGACA +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHLRTLR*HLLVRT
Trigger: TGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAG...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCAAAGTCAAAGTCTCCTaGGGACTGCTCAGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCKVKVS*GLLRQD
Trigger: GTCTTGCCTGAGCAGTCCCCAGGAGACTTTGACTTT...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTATTGACCCAAGACTGCTaGATCGGCTTCCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVLTQDC*IGFLIC
Trigger: GCAGATCAGGAAGCCGATCCAGCAGTCTTGGGTCAA...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACAGGGACAGGCTGGCCTaGAATCTCAGCAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHRDRLA*NLSRGH
Trigger: ATGTCCCCTGCTGAGATTCCAGGCCAGCCTGTCCCT...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397525.5
CDS-3UTR CCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAGGAGAGGGTGCTCTTTaGCCCAGTAAAGATGTTGTA +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQGEGAL*PSKDVV
Trigger: TACAACATCTTTACTGGGCCAAAGAGCACCCTCTCC...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGGTTTGCGCATGCCTTaGAATGGATCTCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTGLRMP*NGSPSS
Trigger: GCTACTCGGAGATCCATTCCAAGGCATGCGCAAACC...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGGTTCTGTCCACCTGTaGTTTGCCAAAACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSGSVHL*FAKTRL
Trigger: CAGCCTGGTTTTGGCAAACCACAGGTGGACAGAACC...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGGTTCTGTCCACCTGTaGTTTGCCAAAACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVGSVHL*FAKTRL
Trigger: CAGCCTGGTTTTGGCAAACCACAGGTGGACAGAACC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CGGCACTGGGTACAGAGCTGGATGACAGGAGGTTTTCTTCACTGGCCTTCTGAGGGAGGTTTTCTTCACTaGCCTTCTGAGTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: RHWVQSWMTGGFLHWPSEGGFLH*PSEYPL
Trigger: AAGAGGATACTCAGAAGGCCAGTGAAGAAAACCTCC...CTCAGAAGGCCAGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAACACTGGGTACAGAGCTaGATGACAGGAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQHWVQS*MTGGFL
Trigger: AAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTG...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAAGTCTCGATCGGCACTaGGTACAGAGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTSLDRH*VQSWMT
Trigger: TGTCATCCAGCTCTGTACCCAGTGCCGATCGAGACT...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTAGTCTCGATCGGCACTaGGTACAGAGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSSLDRH*VQSWMT
Trigger: TGTCATCCAGCTCTGTACCCAGTGCCGATCGAGACT...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACAGTCTCGATCGGCACTaGGTACAGAGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHSLDRH*VQSWMT
Trigger: TGTCATCCAGCTCTGTACCCAGTGCCGATCGAGACT...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACACTTTGGTGTAACGGTTaGCCTGGGACAGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTLWCNG*PGTVGW
Trigger: CCACCCCACTGTCCCAGGCCAACCGTTACACCAAAG...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACACTGGGGATGCCAAGGTaGGTGTTTTTCTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTLGMPR*VFFSQL
Trigger: CAACTGGGAGAAAAACACCCACCTTGGCATCCCCAG...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGCTGGGGATGCCAAGGTaGGTGTTTTTCTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGLGMPR*VFFSQL
Trigger: CAACTGGGAGAAAAACACCCACCTTGGCATCCCCAG...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAAGGTGTTGTAGGAACTaGGGATGCCAAGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTRCCRN*GCQGGC
Trigger: ACACCCACCTTGGCATCCCCAGTTCCTACAACACCT...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTACAAGGGGAACTTGGTaGACAGGGCGGAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSTRGTW*TGRRKG
Trigger: ACCTTTTCTCCGCCCTGTCCACCAAGTTCCCCTTGT...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACTTGGAAGATGCTGTaGATGTACTCCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHTWKML*MYSLGQ
Trigger: CTGGCCCAGGGAGTACATCCACAGCATCTTCCAAGT...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAACTTGGAAGATGCTGTaGATGTACTCCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVTWKML*MYSLGQ
Trigger: CTGGCCCAGGGAGTACATCCACAGCATCTTCCAAGT...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACCTGAGCCAAACCATTTaGCAAGGCCCACAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHLSQTI*QGPQGS
Trigger: GCTCCCCTGTGGGCCTTGCCAAATGGTTTGGCTCAG...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGACCACACCAGATGCATaGGTTCCACCAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTETTPDA*VPPNSF
Trigger: GAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGT...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTTTCACACGCTCTCGTaGATCTACTATCCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSFHTLS*IYYPAH
Trigger: GTGCGCAGGATAGTAGATCCACGAGAGCGTGTGAAA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTGCAGGGGACATCAAATaGCTTTCAAGGTTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSAGDIK*LSRFRL
Trigger: CAGCCGAAACCTTGAAAGCCATTTGATGTCCCCTGC...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330125.10
ENST00000397525.5
CDS-3UTR CCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCGCAGGGGACATCAAATaGCTTTCAAGGTTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCAGDIK*LSRFRL
Trigger: CAGCCGAAACCTTGAAAGCCATTTGATGTCCCCTGC...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330125.10
ENST00000397525.5
CDS-3UTR TCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACCCGACTGGCAGAGACTaGCCCTTCTCCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHPTGRD*PFSQNI
Trigger: GATGTTTTGGGAGAAGGGTCAGTCTCTGCCAGTCGG...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTGCCATGAAGGGAGTTaGATTCTTCACTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSCHEGS*ILHLLV
Trigger: GACCAGCAAGTGAAGAATTCAACTCCCTTCATGGCA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACTGCTCACTAGCTTGTTaGACGCAGTCATGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHCSLAC*TQSCLR
Trigger: ACGGAGACATGACTGCGTTCAACAAGCTAGTGAGCA...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCATGCACGGGTGCTGGTaGCTTGGTCACTCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFMHGCW*LGHSLL
Trigger: CAACAGCGAGTGACCAAGTCACCAGCACCCGTGCAT...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGATGCACGGGTGCTGGTaGCTTGGTCACTCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLMHGCW*LGHSLL
Trigger: CAACAGCGAGTGACCAAGTCACCAGCACCCGTGCAT...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCCATCTTACGAATCACTaGGGTAGGGGTAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCHLTNH*GRGKGR
Trigger: CCTTCCTTTACCCCTACCTCAGTGATTCGTAAGATG...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp AGGAACTGGGGATGCCAAGGTGGGTGTTTTTCTCCCAGTTGCTTTAGGTCGATAGGGTACAGAGCTGGATaGCAGGAGGTTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: RNWGCQGGCFSPSCFRSIGYRAG*QEVFFT
Trigger: AGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCC...TATCGACCTAAAGCAACTGGGAGAAAAACACCCACCTTGGCATCCCCAGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR TCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAGGTCCGGGCTTAGTTaGGTCTGCCTGCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVRSGLS*VCLPCS
Trigger: TGAGCAGGGCAGGCAGACTCAACTAAGCCCGGACCT...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTCCGTCTCTGAGGGCTaGGAACAACATCTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTESVSEG*EQHLSH
Trigger: ATGACTTAGATGTTGTTCTCAGCCCTCAGAGACGGA...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTATCATGGGTTTGCGCATaGCTTGGAATGGATCTCCGA +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVSWVCA*LGMDLR
Trigger: TCGGAGATCCATTCCAAGGCATGCGCAAACCCATGA...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp AGGAACTGGGGATGCCAAGGTGGGTGTTTTTCTCCCAGTTGCTTTAGGTCGATATCATGGGTTTGCGCATaGCTTGGAATGGATCTCCGA +
Preference number: 4 (lower is better)
Translates to: RNWGCQGGCFSPSCFRSISWVCA*LGMDLR
Trigger: TCGGAGATCCATTCCAAGGCATGCGCAAACCCATGA...TATCGACCTAAAGCAACTGGGAGAAAAACACCCACCTTGGCATCCCCAGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCTAAAGCTGCCTGTTaGAACTCCAGCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGSKAAC*NSSWLI
Trigger: GATGAGCCAGCTGGAGTTGCAACAGGCAGCTTTAGA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACATCTAAAGCTGCCTGTTaGAACTCCAGCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTSKAAC*NSSWLI
Trigger: GATGAGCCAGCTGGAGTTGCAACAGGCAGCTTTAGA...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCCTGGTAGAAGTTTGCTaGCTGTACAGCAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCLVEVC*LYSKVM
Trigger: CATGACCTTGCTGTACAGGCAGCAAACTTCTACCAG...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTCTGGTAGAAGTTTGCTaGCTGTACAGCAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSLVEVC*LYSKVM
Trigger: CATGACCTTGCTGTACAGGCAGCAAACTTCTACCAG...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACATGTCCACCTGTGGTTTaGCAAAACCAGGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTCPPVV*QNQAGR
Trigger: TCTACCAGCCTGGTTTTGGCAAACCACAGGTGGACA...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTGTCCACCTGTGGTTTaGCAAAACCAGGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGCPPVV*QNQAGR
Trigger: TCTACCAGCCTGGTTTTGGCAAACCACAGGTGGACA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAGAGGAATTCCCTCGATaGACGGGTGCTGGTGACTTG +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTEEFPR*TGAGDL
Trigger: CAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTC...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACTGTCACCAAGAGCTaGTTTTCCAGATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHTVTKS*FSRCWL
Trigger: GAGCCAGCATCTGGAAAAGCAGCTCTTGGTGACAGT...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGTAGGAACTGGGGATaGCAAGGTGGGTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTECRNWG*QGGCFS
Trigger: AGAAAAACACCCACCTTGGCATCCCCAGTTCCTACA...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTGTAGGAACTGGGGATaGCAAGGTGGGTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSCRNWG*QGGCFS
Trigger: AGAAAAACACCCACCTTGGCATCCCCAGTTCCTACA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGAGCAAACTTGGAAGATaGTGTGGATGTACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTESKLGR*CGCTPW
Trigger: CCAGGGAGTACATCCACAGCATCTTCCAAGTTTGCT...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCCAGAGCCTGGAGGATaGAGAACTGAGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFPEPGG*RTERCS
Trigger: GCTACAGCGCTCAGTTCTGCATCCTCCAGGCTCTGG...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCTGAACGCTGACAGCTaGTGCATGGGAACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFLNADS*CMGTRA
Trigger: GGCTCTGGTTCCCATGCAGCAGCTGTCAGCGTTCAG...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACATGGAGGGCAGGGGTTaGTGTAGCACATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHMEGRG*CSTSEP
Trigger: TGGCTCAGATGTGCTACAGCAACCCCTGCCCTCCAT...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTTTAGTTGAGTCTGCCTaGCCTGCTCACTGTCGGTAT +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSLVESA*PAHCRY
Trigger: ATACCGACAGTGAGCAGGGCAGGCAGACTCAACTAA...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTATTAGTTGAGTCTGCCTaGCCTGCTCACTGTCGGTAT +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVLVESA*PAHCRY
Trigger: ATACCGACAGTGAGCAGGGCAGGCAGACTCAACTAA...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTGATGAAGCAGGGTCCTaGCCAGTGTGCCACCACAGG +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVDEAGS*PVCHHR
Trigger: CCTGTGGTGGCACACTGGGCAGGACCCTGCTTCATC...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAACAGCTTCACACAGAGTaGTCCAAAGTAAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQQLHTE*SKVKAH
Trigger: ATGGGCTTTTACTTTGGAGCACTCTGTGTGAAGCTG...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAGCGGACCACACCAGATaGATGGGTTCCACCAAACAG +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTADHTR*MGSTKQ
Trigger: CTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGC...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACCGGCCACTCCTCCATTaGACTCTACTATACCTTCCT +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHRPLLH*TLLYLP
Trigger: AGGAAGGTATAGTAGAGTGCAATGGAGGAGTGGCCG...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTCGGCCACTCCTCCATTaGACTCTACTATACCTTCCT +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSRPLLH*TLLYLP
Trigger: AGGAAGGTATAGTAGAGTGCAATGGAGGAGTGGCCG...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAAAAGTCAAAGTCTCCTaGGGACTGCTCAGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTKVKVS*GLLRQD
Trigger: GTCTTGCCTGAGCAGTCCCCAGGAGACTTTGACTTT...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAGAATTCTTCACTTGCTaGTCAACCTTCAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQEFFTC*STFKPF
Trigger: GAAGGGCTTGAAGGTTGACCAGCAAGTGAAGAATTC...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAATCAGTTGTCGATTGTTaGTTACGGCACTCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQSVVDC*LRHSRS
Trigger: AGACCTTGAGTGCCGTAACCAACAATCGACAACTGA...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTGCAGGGGACATCAAATaGCTTTCAAGGTTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSAGDIK*LSRFRF
Trigger: GAAGCGAAACCTTGAAAGCCATTTGATGTCCCCTGC...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS-3UTR CCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACATTCTTAGGGACAGGCTaGCCTGGAATCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTFLGTG*PGISAG
Trigger: CCCTGCTGAGATTCCAGGCCAGCCTGTCCCTAAGAA...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397525.5
CDS-3UTR CCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCGGGTGCTGGTGACTTaGTCACTCGCTGTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFRVLVT*SLAVAC
Trigger: ACAGGCAACAGCGAGTGACCAAGTCACCAGCACCCG...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGCGGGTGCTGGTGACTTaGTCACTCGCTGTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLRVLVT*SLAVAC
Trigger: ACAGGCAACAGCGAGTGACCAAGTCACCAGCACCCG...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAGATAATCTTGTTCTTTaGTGTAACGGTTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQDNLVL*CNGWPG
Trigger: CCCAGGCCAACCGTTACACCAAAGAACAAGATTATC...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGCTGAGCCAAACCATTTaGCAAGGCCCACAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLLSQTI*QGPQGS
Trigger: GCTCCCCTGTGGGCCTTGCCAAATGGTTTGGCTCAG...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACCACACCAGATGCATaGGTTCCACCAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHTTPDA*VPPNSF
Trigger: GAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGT...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGACCACACCAGATGCATaGGTTCCACCAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGTTPDA*VPPNSF
Trigger: GAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGT...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAACCACACCAGATGCATaGGTTCCACCAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVTTPDA*VPPNSF
Trigger: GAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGT...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACATTTCACACGCTCTCGTaGATCTACTATCCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTFHTLS*IYYPAH
Trigger: GTGCGCAGGATAGTAGATCCACGAGAGCGTGTGAAA...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTTTCAGACTGACTTGTaGGTCCAGCAGAGAACCACT +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSFQTDL*VQQRTT
Trigger: AGTGGTTCTCTGCTGGACCCACAAGTCAGTCTGAAA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCTTTCAGACTGACTTGTaGGTCCAGCAGAGAACCACT +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCFQTDL*VQQRTT
Trigger: AGTGGTTCTCTGCTGGACCCACAAGTCAGTCTGAAA...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCCGACTGGCAGAGACTaGCCCTTCTCCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFPTGRD*PFSQNI
Trigger: GATGTTTTGGGAGAAGGGTCAGTCTCTGCCAGTCGG...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACACTCTTCATGTGGTGTTaGCCCAAGACTGCTGGATCG +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTLFMWC*PKTAGS
Trigger: CGATCCAGCAGTCTTGGGTCAACACCACATGAAGAG...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACTGCCATGAAGGGAGTTaGATTCTTCACTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHCHEGS*ILHLLV
Trigger: GACCAGCAAGTGAAGAATTCAACTCCCTTCATGGCA...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACAGTTTGAAACACCTGTaGCAAGGGAGGAGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHSLKHL*QGRRGC
Trigger: GCACCCTCTCCTCCCTTGTCACAGGTGTTTCAAACT...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAGAGGCTGCTCGAGTTTaGAACACCTGTGACAAGGGA +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTEAARV*NTCDKG
Trigger: TCCCTTGTCACAGGTGTTTCAAACTCGAGCAGCCTC...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAGCGAAGGTAGTCAGCTaGGGCTGCTCGAGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTAKVVS*GCSSLK
Trigger: TTTCAAACTCGAGCAGCCTCAGCTGACTACCTTCGC...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGTGAAACCAATTGGTaGTGGTATTCTTGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTECETNW*WYSWAK
Trigger: CTTCGCCCAAGAATACCATCACCAATTGGTTTCACA...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTGTGAAACCAATTGGTaGTGGTATTCTTGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSCETNW*WYSWAK
Trigger: CTTCGCCCAAGAATACCATCACCAATTGGTTTCACA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGCTGTTGCCTGTTTCTaGATCCATCTCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTAVACF*IHLWFC
Trigger: ACAGAACCAGAGATGGATTCAGAAACAGGCAACAGC...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTCATCTTACGAATCACTaGGGTAGGGGTAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSHLTNH*GRGKGR
Trigger: CCTTCCTTTACCCCTACCTCAGTGATTCGTAAGATG...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTGGGTTGTCTGAACGCTaGCAGCTGCTGCATGGGAAC +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVGLSER*QLLHGN
Trigger: GTTCCCATGCAGCAGCTGTCAGCGTTCAGACAACCC...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCGGGTTGTCTGAACGCTaGCAGCTGCTGCATGGGAAC +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIGLSER*QLLHGN
Trigger: GTTCCCATGCAGCAGCTGTCAGCGTTCAGACAACCC...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCGTCTCTGAGGGCTaGGAACAACATCTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGSVSEG*EQHLSH
Trigger: ATGACTTAGATGTTGTTCTCAGCCCTCAGAGACGGA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACACCAAAGCTCCGTCTCTaGGGGCTGAGAACAACATCT +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTPKLRL*GLRTTS
Trigger: AGATGTTGTTCTCAGCCCTCAGAGACGGAGCTTTGG...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCGGCTGACTTTGGGCTaGGAAGGCAAAGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFRLTLG*EGKVPL
Trigger: AAGTGGGACTTTGCCTTCTCAGCCCAAAGTCAGCCG...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330125.10
ENST00000397525.5
CDS-3UTR GCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAGCCGCAGGCTCCTGTaGAAGGATGACCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVSRRLL*KDDLHF
Trigger: GAAGTGGAGGTCATCCTTGCACAGGAGCCTGCGGCT...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCGTTGAATTCTTCACTTaGTGGTCAACCTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCVEFFT*WSTFKP
Trigger: GGGCTTGAAGGTTGACCAGCAAGTGAAGAATTCAAC...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAGGATCTCCGAGTAGCTaGTGTGGTCCTGGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTGSPSS*CGPGVK
Trigger: TTTCACACCAGGACCACAGCAGCTACTCGGAGATCC...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACTGGGGCTCATGGGTTTaGGCATGCCTTGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHWGSWV*ACLGMD
Trigger: ATCCATTCCAAGGCATGCGCAAACCCATGAGCCCCA...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTTGGTCACTCGCTGTTaGCTGTTTCTGAATCCATCT +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSLVTRC*LFLNPS
Trigger: AGATGGATTCAGAAACAGGCAACAGCGAGTGACCAA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTTGGTCACTCGCTGTTaGCTGTTTCTGAATCCATCT +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTELVTRC*LFLNPS
Trigger: AGATGGATTCAGAAACAGGCAACAGCGAGTGACCAA...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTTGTAGGAACTGGGGATaGCAAGGTGGGTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSCRNWG*QGGCFS
Trigger: AGAAAAACACCCACCTTGGCATCCCCAGTTCCTACA...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTAGCAAACTTGGAAGATaGTGTGGATGTACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSSKLGR*CGCTPW
Trigger: CCAGGGAGTACATCCACAGCATCTTCCAAGTTTGCT...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTCCAGAGCCTGGAGGATaGAGAACTGAGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVPEPGG*RTERCS
Trigger: GCTACAGCGCTCAGTTCTGCATCCTCCAGGCTCTGG...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCGTGGATCTACTATCCTaGGCACCAGGGAAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIVDLLS*APGKAG
Trigger: ACCGGCCTTCCCTGGTGCGCAGGATAGTAGATCCAC...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGGGCCTCTGTTTGGAATaGGGGAGTTCTTTTATATCC +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEGLCLE*GSSFIS
Trigger: GGATATAAAAGAACTCCCCCATTCCAAACAGAGGCC...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTCCAGGAGAGAGGATaGCTTGCTCCAGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLVQERG*LAPDLQ
Trigger: TTGCAGGTCTGGAGCAAGCCATCCTCTCTCCTGGAC...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTCAGTTGTCGATTGTTaGTTACGGCACTCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTESVVDC*LRHSRS
Trigger: AGACCTTGAGTGCCGTAACCAACAATCGACAACTGA...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTCAGTTGTCGATTGTTaGTTACGGCACTCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSSVVDC*LRHSRS
Trigger: AGACCTTGAGTGCCGTAACCAACAATCGACAACTGA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCAGGGACAGGCTGGCCTaGAATCTCAGCAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIRDRLA*NLSRGH
Trigger: ATGTCCCCTGCTGAGATTCCAGGCCAGCCTGTCCCT...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397525.5
CDS-3UTR CCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCTTCTTAGGGACAGGCTaGCCTGGAATCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFFLGTG*PGISAG
Trigger: CCCTGCTGAGATTCCAGGCCAGCCTGTCCCTAAGAA...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGGAGAGGGTGCTCTTTaGCCCAGTAAAGATGTTGTA +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVGEGAL*PSKDVV
Trigger: TACAACATCTTTACTGGGCCAAAGAGCACCCTCTCC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGGAGAGGGTGCTCTTTaGCCCAGTAAAGATGTTGTA +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTGEGAL*PSKDVV
Trigger: TACAACATCTTTACTGGGCCAAAGAGCACCCTCTCC...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACGGTTTGCGCATGCCTTaGAATGGATCTCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHGLRMP*NGSPSS
Trigger: GCTACTCGGAGATCCATTCCAAGGCATGCGCAAACC...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACATGCTTTTCCAGATGCTaGCTCCTCCTTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTCFSRC*LLLAFL
Trigger: GAGAAAAGCAAGGAGGAGCCAGCATCTGGAAAAGCA...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACACACTGGGTACAGAGCTaGATGACAGGAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTHWVQS*MTGGFL
Trigger: AAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTG...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTCACTGGGTACAGAGCTaGATGACAGGAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSHWVQS*MTGGFL
Trigger: AAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTG...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGGATAATCTTGTTCTTTaGTGTAACGGTTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEDNLVL*CNGWPG
Trigger: CCCAGGCCAACCGTTACACCAAAGAACAAGATTATC...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCGATAATCTTGTTCTTTaGTGTAACGGTTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCDNLVL*CNGWPG
Trigger: CCCAGGCCAACCGTTACACCAAAGAACAAGATTATC...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACAGGTGTTGTAGGAACTaGGGATGCCAAGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHRCCRN*GCQGGC
Trigger: ACACCCACCTTGGCATCCCCAGTTCCTACAACACCT...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGGGACAAGGGGAACTTaGTGGACAGGGCGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLGTRGT*WTGRRK
Trigger: TTTTCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCC...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TCTTTGCTCTCGTACATCTTACGAATCACTGAGGTAGGGGTAAAGGAAGGAGAAGGGACAAGGGGAACTTaGTGGACAGGGCGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SLLSYILRITEVGVKEGEGTRGT*WTGRRK
Trigger: TTTTCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCC...TTCTCCTTCCTTTACCCCTACCTCAGTGATTCGTAAGATGTACGAGAGCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACACTAACCATAGGGACATaGGGGACAAGGGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTLTIGT*GTRGTW
Trigger: CCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAG...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCACCTCTGTACCAACCCTaGGTGAAGCTGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSPLYQP*VKLVSR
Trigger: CCTGCTCACCAGCTTCACCCAGGGTTGGTACAGAGG...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAATACACTCCACTCGACTaGTTAAGATCCTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQYTPLD*LRSFHH
Trigger: ATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTA...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACATTTCAGACTGACTTGTaGGTCCAGCAGAGAACCACT +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTFQTDL*VQQRTT
Trigger: AGTGGTTCTCTGCTGGACCCACAAGTCAGTCTGAAA...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTAGCCAGTCAGTTCGATaGTTTCAGACTGACTTGTGG +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSSQSVR*FQTDLW
Trigger: CCACAAGTCAGTCTGAAACCATCGAACTGACTGGCT...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAAGCCAGTCAGTTCGATaGTTTCAGACTGACTTGTGG +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVSQSVR*FQTDLW
Trigger: CCACAAGTCAGTCTGAAACCATCGAACTGACTGGCT...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATCCAGCTGGCTCATCTaGGCTGTGATGGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSSSWLI*AVMGLM
Trigger: CATGAGCCCCATCACAGCCCAGATGAGCCAGCTGGA...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCTCCAGCTGGCTCATCTaGGCTGTGATGGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKISSWLI*AVMGLM
Trigger: CATGAGCCCCATCACAGCCCAGATGAGCCAGCTGGA...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTTTTTCAGAAAGGCATaGAGGCCTCTGTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSFFRKA*RPLFGM
Trigger: CATTCCAAACAGAGGCCTTCATGCCTTTCTGAAAAA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGCTCTTCATGTGGTGTTaGCCCAAGACTGCTGGATCG +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLLFMWC*PKTAGS
Trigger: CGATCCAGCAGTCTTGGGTCAACACCACATGAAGAG...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCGCGAAGGTAGTCAGCTaGGGCTGCTCGAGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFAKVVS*GCSSLK
Trigger: TTTCAAACTCGAGCAGCCTCAGCTGACTACCTTCGC...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACTCTTCACTGGCCTTCTaGGTATCCTCTTTACTGTCA +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHSSLAF*VSSLLS
Trigger: TGACAGTAAAGAGGATACTCAGAAGGCCAGTGAAGA...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTATCTTCACTGGCCTTCTaGGTATCCTCTTTACTGTCA +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVSSLAF*VSSLLS
Trigger: TGACAGTAAAGAGGATACTCAGAAGGCCAGTGAAGA...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACATCTTCACTGGCCTTCTaGGTATCCTCTTTACTGTCA +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTSSLAF*VSSLLS
Trigger: TGACAGTAAAGAGGATACTCAGAAGGCCAGTGAAGA...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACGGGTACAGAGCTGGATaGCAGGAGGTTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHGYRAG*QEVFFT
Trigger: AGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCC...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGTCGATGGTTTCAGACTaGCTTGTGGGTCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLSMVSD*LVGPAE
Trigger: CTCTGCTGGACCCACAAGTCAGTCTGAAACCATCGA...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTCTATACCTACTATCCTaGGCACCAGGGAAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVLYLLS*APGKAG
Trigger: ACCGGCCTTCCCTGGTGCGCAGGATAGTAGGTATAG...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS-3UTR GCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACGTTGAATTCTTCACTTaGTGGTCAACCTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHVEFFT*WSTFKP
Trigger: GGGCTTGAAGGTTGACCAGCAAGTGAAGAATTCAAC...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGTTGAATTCTTCACTTaGTGGTCAACCTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTVEFFT*WSTFKP
Trigger: GGGCTTGAAGGTTGACCAGCAAGTGAAGAATTCAAC...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGTTGAATTCTTCACTTaGTGGTCAACCTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVVEFFT*WSTFKP
Trigger: GGGCTTGAAGGTTGACCAGCAAGTGAAGAATTCAAC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCGGATCTCCGAGTAGCTaGTGTGGTCCTGGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFGSPSS*CGPGVK
Trigger: TTTCACACCAGGACCACAGCAGCTACTCGGAGATCC...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGGATCTCCGAGTAGCTaGTGTGGTCCTGGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLGSPSS*CGPGVK
Trigger: TTTCACACCAGGACCACAGCAGCTACTCGGAGATCC...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCTGGGGCTCATGGGTTTaGGCATGCCTTGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFWGSWV*ACLGMD
Trigger: ATCCATTCCAAGGCATGCGCAAACCCATGAGCCCCA...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACATCTAAAGCTGCCTGTTaGAACTCCAGCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTSKAAC*NSSWLI
Trigger: GATGAGCCAGCTGGAGTTGCAACAGGCAGCTTTAGA...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCGAGGAATTCCCTCGATaGACGGGTGCTGGTGACTTG +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIEEFPR*TGAGDL
Trigger: CAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTC...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTGAGGAATTCCCTCGATaGACGGGTGCTGGTGACTTG +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVEEFPR*TGAGDL
Trigger: CAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTC...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp AGTCTCGATCGGCACTGGGTACAGAGCTGGATGACAGGAGGTTTTCTTCACTGGCCTTGCTTTTCTCTTTaGTCTCGTACATCTTACGAA +
Preference number: 4 (lower is better)
Translates to: SLDRHWVQSWMTGGFLHWPCFSL*SRTSYE
Trigger: TTCGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGG...CCAGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTGCCGATCGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACACTGTCACCAAGAGCTaGTTTTCCAGATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHTVTKS*FSRCWL
Trigger: GAGCCAGCATCTGGAAAAGCAGCTCTTGGTGACAGT...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCTGCACCATTGCCAGATaGAGAGGTGTTCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFCTIAR*RGVPGR
Trigger: TCGTCCTGGAACACCTCTGCATCTGGCAATGGTGCA...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGCTGCTGTTGCACCATTaGCAGATGCAGAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLLLLHH*QMQRCS
Trigger: GGAACACCTCTGCATCTGGCAATGGTGCAACAGCAG...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGCGCTGTAGCTGCTGTTaGACCATTGCCAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLRCSCC*TIARCR
Trigger: TCTGCATCTGGCAATGGTGCAACAGCAGCTACAGCG...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGACTGAGCGCTGTAGCTaGTGTTGCACCATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLTERCS*CCTIAR
Trigger: TCTGGCAATGGTGCAACAGCAGCTACAGCGCTCAGT...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTATGGAGGGCAGGGGTTaGTGTAGCACATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVMEGRG*CSTSEP
Trigger: TGGCTCAGATGTGCTACAGCAACCCCTGCCCTCCAT...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGCAGCTTCACACAGAGTaGTCCAAAGTAAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGQLHTE*SKVKAH
Trigger: ATGGGCTTTTACTTTGGAGCACTCTGTGTGAAGCTG...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACACAGCTTCACACAGAGTaGTCCAAAGTAAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTQLHTE*SKVKAH
Trigger: ATGGGCTTTTACTTTGGAGCACTCTGTGTGAAGCTG...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTGCGGACCACACCAGATaGATGGGTTCCACCAAACAG +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVADHTR*MGSTKQ
Trigger: CTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGC...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCTCAGAACCCTTAGGTaGCACCTCTTGGTGAGGACA +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFLRTLR*HLLVRT
Trigger: TGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAG...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTTACTTCTCCTATCCATaGCTCCTTGGTCTACAATGC +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSYFSYP*LLGLQC
Trigger: GCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTA...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGGCCTCTGTTTGGAATaGGGGAGTTCTTTTATATCC +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSGLCLE*GSSFIS
Trigger: GGATATAAAAGAACTCCCCCATTCCAAACAGAGGCC...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGGCCTCTGTTTGGAATaGGGGAGTTCTTTTATATCC +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVGLCLE*GSSFIS
Trigger: GGATATAAAAGAACTCCCCCATTCCAAACAGAGGCC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGATGAAGGCCTCTGTTTaGAATGGGGGAGTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEMKASV*NGGVLL
Trigger: TAAAAGAACTCCCCCATTCCAAACAGAGGCCTTCAT...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCATGAAGGCCTCTGTTTaGAATGGGGGAGTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCMKASV*NGGVLL
Trigger: TAAAAGAACTCCCCCATTCCAAACAGAGGCCTTCAT...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCACAAGACAGCATCCCTTaGCACTTCCTGATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSQDSIP*HFLISR
Trigger: GCGGCTGATCAGGAAGTGCCAAGGGATGCTGTCTTG...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTCAAGACAGCATCCCTTaGCACTTCCTGATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVQDSIP*HFLISR
Trigger: GCGGCTGATCAGGAAGTGCCAAGGGATGCTGTCTTG...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAAAAGTCAAAGTCTCCTaGGGACTGCTCAGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTKVKVS*GLLRQD
Trigger: GTCTTGCCTGAGCAGTCCCCAGGAGACTTTGACTTT...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCTTGACCCAAGACTGCTaGATCGGCTTCCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFLTQDC*IGFLIC
Trigger: GCAGATCAGGAAGCCGATCCAGCAGTCTTGGGTCAA...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACGAATTCTTCACTTGCTaGTCAACCTTCAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHEFFTC*STFKPF
Trigger: GAAGGGCTTGAAGGTTGACCAGCAAGTGAAGAATTC...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAATTCTTCACTTGCTaGTCAACCTTCAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTEFFTC*STFKPF
Trigger: GAAGGGCTTGAAGGTTGACCAGCAAGTGAAGAATTC...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCAGTTGTCGATTGTTaGTTACGGCACTCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGSVVDC*LRHSRS
Trigger: AGACCTTGAGTGCCGTAACCAACAATCGACAACTGA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTTTCTTAGGGACAGGCTaGCCTGGAATCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVFLGTG*PGISAG
Trigger: CCCTGCTGAGATTCCAGGCCAGCCTGTCCCTAAGAA...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397525.5
CDS-3UTR CCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTTGTTGCAACTCCAGCTaGCTCATCTGCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVCCNSS*LICWAV
Trigger: CACAGCCCAGCAGATGAGCCAGCTGGAGTTGCAACA...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS-3UTR CCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCGGTTCTGTCCACCTGTaGTTTGCCAAAACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFGSVHL*FAKTRL
Trigger: CAGCCTGGTTTTGGCAAACCACAGGTGGACAGAACC...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGGAGGTTTTCTTCACTaGCCTTCTGAGTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVGGFLH*PSEYPL
Trigger: AAGAGGATACTCAGAAGGCCAGTGAAGAAAACCTCC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGGGAGGTTTTCTTCACTaGCCTTCTGAGTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGGGFLH*PSEYPL
Trigger: AAGAGGATACTCAGAAGGCCAGTGAAGAAAACCTCC...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCAGTCTCGATCGGCACTaGGTACAGAGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFSLDRH*VQSWMT
Trigger: TGTCATCCAGCTCTGTACCCAGTGCCGATCGAGACT...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCCTGGGACAGTGGGGTaGAACACGAAGACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIPGTVG*NTKTSV
Trigger: TACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGG...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTCCTGGGACAGTGGGGTaGAACACGAAGACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVPGTVG*NTKTSV
Trigger: TACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGG...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCAGGTGTTGTAGGAACTaGGGATGCCAAGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFRCCRN*GCQGGC
Trigger: ACACCCACCTTGGCATCCCCAGTTCCTACAACACCT...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAGGGACAAGGGGAACTTaGTGGACAGGGCGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSGTRGT*WTGRRK
Trigger: TTTTCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCC...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTTGTGGATGTACTCCCTaGGCCAGCATCCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVCGCTP*ASILCT
Trigger: GGTACAGAGGATGCTGGCCCAGGGAGTACATCCACA...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGACTTGGAAGATGCTGTaGATGTACTCCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLTWKML*MYSLGQ
Trigger: CTGGCCCAGGGAGTACATCCACAGCATCTTCCAAGT...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAAGGGCTGACCCAGGATaGGGCCAGATATTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSRADPG*GQIFPV
Trigger: TACAGGGAATATCTGGCCCCATCCTGGGTCAGCCCT...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCAGGGCTGACCCAGGATaGGGCCAGATATTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIRADPG*GQIFPV
Trigger: TACAGGGAATATCTGGCCCCATCCTGGGTCAGCCCT...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTTTTTCAGAAAGGCATaGAGGCCTCTGTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGFFRKA*RPLFGM
Trigger: CATTCCAAACAGAGGCCTTCATGCCTTTCTGAAAAA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCTGCTCACTAGCTTGTTaGACGCAGTCATGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFCSLAC*TQSCLR
Trigger: ACGGAGACATGACTGCGTTCAACAAGCTAGTGAGCA...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAGTTTGAAACACCTGTaGCAAGGGAGGAGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVSLKHL*QGRRGC
Trigger: GCACCCTCTCCTCCCTTGTCACAGGTGTTTCAAACT...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAGAGGCTGCTCGAGTTTaGAACACCTGTGACAAGGGA +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSEAARV*NTCDKG
Trigger: TCCCTTGTCACAGGTGTTTCAAACTCGAGCAGCCTC...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTGCGAAGGTAGTCAGCTaGGGCTGCTCGAGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVAKVVS*GCSSLK
Trigger: TTTCAAACTCGAGCAGCCTCAGCTGACTACCTTCGC...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAGCTGTTGCCTGTTTCTaGATCCATCTCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTAVACF*IHLWFC
Trigger: ACAGAACCAGAGATGGATTCAGAAACAGGCAACAGC...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACGCTGTTGCCTGTTTCTaGATCCATCTCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHAVACF*IHLWFC
Trigger: ACAGAACCAGAGATGGATTCAGAAACAGGCAACAGC...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACCATCTTACGAATCACTaGGGTAGGGGTAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHHLTNH*GRGKGR
Trigger: CCTTCCTTTACCCCTACCTCAGTGATTCGTAAGATG...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCGGGTACAGAGCTGGATaGCAGGAGGTTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFGYRAG*QEVFFT
Trigger: AGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCC...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCCAAAGCTCCGTCTCTaGGGGCTGAGAACAACATCT +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIPKLRL*GLRTTS
Trigger: AGATGTTGTTCTCAGCCCTCAGAGACGGAGCTTTGG...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATCGATGGTTTCAGACTaGCTTGTGGGTCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSSMVSD*LVGPAE
Trigger: CTCTGCTGGACCCACAAGTCAGTCTGAAACCATCGA...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTTCGCTGACTTTGGGCTaGGAAGGCAAAGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVSLTLG*EGKVPL
Trigger: AAGTGGGACTTTGCCTTCTCAGCCCAAAGTCAGCGA...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397523.5
CDS-3UTR GCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACCGGCCACTCCTCCATTaGACTCTACTATACCTACTA +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHRPLLH*TLLYLL
Trigger: TAGTAGGTATAGTAGAGTGCAATGGAGGAGTGGCCG...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS-3UTR GCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGAGGCTGGTAGAAGTTTaGTGCCTGTACAGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLRLVEV*CLYSKV
Trigger: GACCTTGCTGTACAGGCAGCAAACTTCTACCAGCCT...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGTGTCCACCTGTGGTTTaGCAAAACCAGGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLCPPVV*QNQAGR
Trigger: TCTACCAGCCTGGTTTTGGCAAACCACAGGTGGACA...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCTGTCCACCTGTGGTTTaGCAAAACCAGGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFCPPVV*QNQAGR
Trigger: TCTACCAGCCTGGTTTTGGCAAACCACAGGTGGACA...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGCCTTGCTTTTCTCTTTaGTCTCGTACATCTTACGAA +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEPCFSL*SRTSYE
Trigger: TTCGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGG...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTCCTTGCTTTTCTCTTTaGTCTCGTACATCTTACGAA +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSPCFSL*SRTSYE
Trigger: TTCGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGG...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACAGCAAACTTGGAAGATaGTGTGGATGTACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHSKLGR*CGCTPW
Trigger: CCAGGGAGTACATCCACAGCATCTTCCAAGTTTGCT...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATGCACCATTGCCAGATaGAGAGGTGTTCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSCTIAR*RGVPGR
Trigger: TCGTCCTGGAACACCTCTGCATCTGGCAATGGTGCA...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTCGCTGTAGCTGCTGTTaGACCATTGCCAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVRCSCC*TIARCR
Trigger: TCTGCATCTGGCAATGGTGCAACAGCAGCTACAGCG...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCGCTGTAGCTGCTGTTaGACCATTGCCAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIRCSCC*TIARCR
Trigger: TCTGCATCTGGCAATGGTGCAACAGCAGCTACAGCG...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCACTCAGAACCCTTAGGTaGCACCTCTTGGTGAGGACA +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSLRTLR*HLLVRT
Trigger: TGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAG...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCGGCCACTCCTCCATTaGACTCTACTATACCTTCCT +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFRPLLH*TLLYLP
Trigger: AGGAAGGTATAGTAGAGTGCAATGGAGGAGTGGCCG...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTACATCGAAGCCAAGCATaGCACCTTATCAAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVHRSQA*HLIKVK
Trigger: TTTAACCTTGATAAGGTGCCATGCTTGGCTTCGATG...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTCATCGAAGCCAAGCATaGCACCTTATCAAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSHRSQA*HLIKVK
Trigger: TTTAACCTTGATAAGGTGCCATGCTTGGCTTCGATG...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTTTGACCCAAGACTGCTaGATCGGCTTCCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVLTQDC*IGFLIC
Trigger: GCAGATCAGGAAGCCGATCCAGCAGTCTTGGGTCAA...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGCATGGTCTTCCAATaGTATAGGAGCAAAGTAATT +
Preference number: 4 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQSMVFQ*YRSKVI
Trigger: AATTACTTTGCTCCTATACCATTGGAAGACCATGCT...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTGGTTTGCGCATGCCTTaGAATGGATCTCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVGLRMP*NGSPSS
Trigger: GCTACTCGGAGATCCATTCCAAGGCATGCGCAAACC...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTGGTTCTGTCCACCTGTaGTTTGCCAAAACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVGSVHL*FAKTRL
Trigger: CAGCCTGGTTTTGGCAAACCACAGGTGGACAGAACC...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACATGCTTTTCCAGATGCTaGCTCCTCCTTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTCFSRC*LLLAFL
Trigger: GAGAAAAGCAAGGAGGAGCCAGCATCTGGAAAAGCA...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TGCCAAGGTGGGTGTTTTTCTCCCAGTTGCTTTAGGTCGATAATCTTGTTCTTTCTGGGGATGCCAAGGTaGGTGTTTTTCTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: CQGGCFSPSCFRSIILFFLGMPR*VFFSQL
Trigger: CAACTGGGAGAAAAACACCCACCTTGGCATCCCCAG...AAAGAACAAGATTATCGACCTAAAGCAACTGGGAGAAAAACACCCACCTTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCACTAACCATAGGGACATaGGGGACAAGGGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSLTIGT*GTRGTW
Trigger: CCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAG...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACTACACTCCACTCGACTaGTTAAGATCCTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHYTPLD*LRSFHH
Trigger: ATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTA...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTATACACTCCACTCGACTaGTTAAGATCCTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVYTPLD*LRSFHH
Trigger: ATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTA...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTACACTCCACTCGACTaGTTAAGATCCTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGYTPLD*LRSFHH
Trigger: ATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGTTTCACACGCTCTCGTaGATCTACTATCCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLFHTLS*IYYPAH
Trigger: GTGCGCAGGATAGTAGATCCACGAGAGCGTGTGAAA...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTTGCTCACTAGCTTGTTaGACGCAGTCATGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVCSLAC*TQSCLR
Trigger: ACGGAGACATGACTGCGTTCAACAAGCTAGTGAGCA...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACTGTGAAACCAATTGGTaGTGGTATTCTTGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHCETNW*WYSWAK
Trigger: CTTCGCCCAAGAATACCATCACCAATTGGTTTCACA...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCTTACGAATCACTaGGGTAGGGGTAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFHLTNH*GRGKGR
Trigger: CCTTCCTTTACCCCTACCTCAGTGATTCGTAAGATG...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAGGGTACAGAGCTGGATaGCAGGAGGTTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSGYRAG*QEVFFT
Trigger: AGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCC...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTGGGTACAGAGCTGGATaGCAGGAGGTTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVGYRAG*QEVFFT
Trigger: AGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCC...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCTCCGTCTCTGAGGGCTaGGAACAACATCTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFSVSEG*EQHLSH
Trigger: ATGACTTAGATGTTGTTCTCAGCCCTCAGAGACGGA...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATTATCGCTAAGACGGTaGTCCTTCTCAAAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSLSLRR*SFSKVR
Trigger: CCGGACCTTTGAGAAGGATCACCGTCTTAGCGATAA...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTTCATGGGTTTGCGCATaGCTTGGAATGGATCTCCGA +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVSWVCA*LGMDLR
Trigger: TCGGAGATCCATTCCAAGGCATGCGCAAACCCATGA...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGCTGGTAGAAGTTTGCTaGCTGTACAGCAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLLVEVC*LYSKVM
Trigger: CATGACCTTGCTGTACAGGCAGCAAACTTCTACCAG...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGCCTTGCTTTTCTCTTTaGTCTCGTACATCTTACGAA +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGPCFSL*SRTSYE
Trigger: TTCGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGG...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACCCTTGCTTTTCTCTTTaGTCTCGTACATCTTACGAA +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHPCFSL*SRTSYE
Trigger: TTCGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGG...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAACTGTCACCAAGAGCTaGTTTTCCAGATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSTVTKS*FSRCWL
Trigger: GAGCCAGCATCTGGAAAAGCAGCTCTTGGTGACAGT...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCTGTTTTTCTCCCAGTTaGTTTAGGTCGATAATCTTG +
Preference number: 4 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCCFSPS*FRSIIL
Trigger: CAAGATTATCGACCTAAAGCAACTGGGAGAAAAACA...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGGGATTGACAACATTGTaGATCCTGTATTCAGACAAT +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEGLTTL*ILYSDN
Trigger: ATTGTCTGAATACAGGATGCACAATGTTGTCAATCC...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGAGATTATCCTCCCACTaGCAATCCTACGTCCACCAA +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLRLSSH*QSYVHQ
Trigger: TTGGTGGACGTAGGATTGGCAGTGGGAGGATAATCT...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACTACTTCTCCTATCCATaGCTCCTTGGTCTACAATGC +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHYFSYP*LLGLQC
Trigger: GCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTA...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACATACTTCTCCTATCCATaGCTCCTTGGTCTACAATGC +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTYFSYP*LLGLQC
Trigger: GCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTA...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAAAAGTCAAAGTCTCCTaGGGACTGCTCAGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSKVKVS*GLLRQD
Trigger: GTCTTGCCTGAGCAGTCCCCAGGAGACTTTGACTTT...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGAGCATGGTCTTCCAATaGTATAGGAGCAAAGTAATT +
Preference number: 4 (lower is better)
Translates to: HNADHTRCMGSTKQLHTESMVFQ*YRSKVI
Trigger: AATTACTTTGCTCCTATACCATTGGAAGACCATGCT...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACGAATTCTTCACTTGCTaGTCAACCTTCAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHEFFTC*STFKPF
Trigger: GAAGGGCTTGAAGGTTGACCAGCAAGTGAAGAATTC...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCTGCTTTTCCAGATGCTaGCTCCTCCTTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFCFSRC*LLLAFL
Trigger: GAGAAAAGCAAGGAGGAGCCAGCATCTGGAAAAGCA...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGAGCCAGTCAGTTCGATaGTTTCAGACTGACTTGTGG +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLSQSVR*FQTDLW
Trigger: CCACAAGTCAGTCTGAAACCATCGAACTGACTGGCT...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCTGCCATGAAGGGAGTTaGATTCTTCACTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKICHEGS*ILHLLV
Trigger: GACCAGCAAGTGAAGAATTCAACTCCCTTCATGGCA...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGCTAGGTGTTCTGCCATaGAGGGAGTTGAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLLGVLP*RELNSS
Trigger: TGAAGAATTCAACTCCCTTCATGGCAGAACACCTAG...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCTAGGTGTTCTGCCATaGAGGGAGTTGAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFLGVLP*RELNSS
Trigger: TGAAGAATTCAACTCCCTTCATGGCAGAACACCTAG...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCTGTGAAACCAATTGGTaGTGGTATTCTTGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFCETNW*WYSWAK
Trigger: CTTCGCCCAAGAATACCATCACCAATTGGTTTCACA...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCGCTGTTGCCTGTTTCTaGATCCATCTCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIAVACF*IHLWFC
Trigger: ACAGAACCAGAGATGGATTCAGAAACAGGCAACAGC...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCTCTTCACTGGCCTTCTaGGTATCCTCTTTACTGTCA +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFSSLAF*VSSLLS
Trigger: TGACAGTAAAGAGGATACTCAGAAGGCCAGTGAAGA...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTCTGGTAGAAGTTTGCTaGCTGTACAGCAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVLVEVC*LYSKVM
Trigger: CATGACCTTGCTGTACAGGCAGCAAACTTCTACCAG...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTGTTTTTCTCCCAGTTaGTTTAGGTCGATAATCTTG +
Preference number: 4 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGCFSPS*FRSIIL
Trigger: CAAGATTATCGACCTAAAGCAACTGGGAGAAAAACA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTTGTTTTTCTCCCAGTTaGTTTAGGTCGATAATCTTG +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSCFSPS*FRSIIL
Trigger: CAAGATTATCGACCTAAAGCAACTGGGAGAAAAACA...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TGCCAAGGTGGGTGTTTTTCTCCCAGTTGCTTTAGGTCGATAATCTTGTTCTTTTGTAGGAACTGGGGATaGCAAGGTGGGTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: CQGGCFSPSCFRSIILFFCRNWG*QGGCFS
Trigger: AGAAAAACACCCACCTTGGCATCCCCAGTTCCTACA...AAAGAACAAGATTATCGACCTAAAGCAACTGGGAGAAAAACACCCACCTTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR GCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAAGCAAACTTGGAAGATaGTGTGGATGTACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSSKLGR*CGCTPW
Trigger: CCAGGGAGTACATCCACAGCATCTTCCAAGTTTGCT...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGGATTGACAACATTGTaGATCCTGTATTCAGACAAT +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSGLTTL*ILYSDN
Trigger: ATTGTCTGAATACAGGATGCACAATGTTGTCAATCC...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCAGATTATCCTCCCACTaGCAATCCTACGTCCACCAA +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIRLSSH*QSYVHQ
Trigger: TTGGTGGACGTAGGATTGGCAGTGGGAGGATAATCT...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAATGAAGGCCTCTGTTTaGAATGGGGGAGTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTMKASV*NGGVLL
Trigger: TAAAAGAACTCCCCCATTCCAAACAGAGGCCTTCAT...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTACTTTATTTTCAGCATaGTCTTCCAATGGTATAGGA +
Preference number: 4 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSTLFSA*SSNGIG
Trigger: TCCTATACCATTGGAAGACCATGCTGAAAATAAAGT...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAGGAGAGGGTGCTCTTTaGCCCAGTAAAGATGTTGTA +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSGEGAL*PSKDVV
Trigger: TACAACATCTTTACTGGGCCAAAGAGCACCCTCTCC...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTTGCTTTTCCAGATGCTaGCTCCTCCTTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVCFSRC*LLLAFL
Trigger: GAGAAAAGCAAGGAGGAGCCAGCATCTGGAAAAGCA...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCACACTGGGTACAGAGCTaGATGACAGGAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSHWVQS*MTGGFL
Trigger: AAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTG...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTCTAGGTGTTCTGCCATaGAGGGAGTTGAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVLGVLP*RELNSS
Trigger: TGAAGAATTCAACTCCCTTCATGGCAGAACACCTAG...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCTTGGTCACTCGCTGTTaGCTGTTTCTGAATCCATCT +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKILVTRC*LFLNPS
Trigger: AGATGGATTCAGAAACAGGCAACAGCGAGTGACCAA...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTCAGCTTCACACAGAGTaGTCCAAAGTAAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVQLHTE*SKVKAH
Trigger: ATGGGCTTTTACTTTGGAGCACTCTGTGTGAAGCTG...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCTACTTCTCCTATCCATaGCTCCTTGGTCTACAATGC +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIYFSYP*LLGLQC
Trigger: GCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTA...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCGGCCTCTGTTTGGAATaGGGGAGTTCTTTTATATCC +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIGLCLE*GSSFIS
Trigger: GGATATAAAAGAACTCCCCCATTCCAAACAGAGGCC...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTACTTTATTTTCAGCATaGTCTTCCAATGGTATAGGA +
Preference number: 4 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSTLFSA*SSNGIG
Trigger: TCCTATACCATTGGAAGACCATGCTGAAAATAAAGT...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACTTTATTTTCAGCATaGTCTTCCAATGGTATAGGA +
Preference number: 4 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHTLFSA*SSNGIG
Trigger: TCCTATACCATTGGAAGACCATGCTGAAAATAAAGT...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAACTTTATTTTCAGCATaGTCTTCCAATGGTATAGGA +
Preference number: 4 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVTLFSA*SSNGIG
Trigger: TCCTATACCATTGGAAGACCATGCTGAAAATAAAGT...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTGGAGGTTTTCTTCACTaGCCTTCTGAGTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVGGFLH*PSEYPL
Trigger: AAGAGGATACTCAGAAGGCCAGTGAAGAAAACCTCC...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAGGAGGTTTTCTTCACTaGCCTTCTGAGTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSGGFLH*PSEYPL
Trigger: AAGAGGATACTCAGAAGGCCAGTGAAGAAAACCTCC...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCGATAATCTTGTTCTTTaGTGTAACGGTTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIDNLVL*CNGWPG
Trigger: CCCAGGCCAACCGTTACACCAAAGAACAAGATTATC...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCTTTTTCAGAAAGGCATaGAGGCCTCTGTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIFFRKA*RPLFGM
Trigger: CATTCCAAACAGAGGCCTTCATGCCTTTCTGAAAAA...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR TCA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATTTTTCAGAAAGGCATaGAGGCCTCTGTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSFFRKA*RPLFGM
Trigger: CATTCCAAACAGAGGCCTTCATGCCTTTCTGAAAAA...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCATCGAAGCCAAGCATaGCACCTTATCAAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIHRSQA*HLIKVK
Trigger: TTTAACCTTGATAAGGTGCCATGCTTGGCTTCGATG...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CCA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACAGCATGGTCTTCCAATaGTATAGGAGCAAAGTAATT +
Preference number: 4 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHSMVFQ*YRSKVI
Trigger: AATTACTTTGCTCCTATACCATTGGAAGACCATGCT...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCTGTTTTTCTCCCAGTTaGTTTAGGTCGATAATCTTG +
Preference number: 4 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFCFSPS*FRSIIL
Trigger: CAAGATTATCGACCTAAAGCAACTGGGAGAAAAACA...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGGATTGACAACATTGTaGATCCTGTATTCAGACAAT +
Preference number: 4 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLGLTTL*ILYSDN
Trigger: ATTGTCTGAATACAGGATGCACAATGTTGTCAATCC...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR GCA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTGGATTGACAACATTGTaGATCCTGTATTCAGACAAT +
Preference number: 4 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVGLTTL*ILYSDN
Trigger: ATTGTCTGAATACAGGATGCACAATGTTGTCAATCC...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS CCA 90 bp AGCCAAACCATTTGGCAAGGCCCACAGGGGAGCTGCTCCTCTGGCTaGGGCGATGCTCCAGCTGGGAGTGCATGTGGGGCAGGCCTGACC +
Preference number: 5 (lower is better)
Translates to: SQTIWQGPQGSCSSG*GDAPAGSACGAGLT
Trigger: GGTCAGGCCTGCCCCACATGCACTCCCAGCTGGAGCATCGCCCCAGCCAGAGGAGCAGCTCCCCTGTGGGCCTTGCCAAATGGTTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS GCA 90 bp GGGGGCCTTGGGACCTCTCCCCTCCAAGTGCAAGTTGTAGCAACCTaGCGGGTCCACGCATGGGCGGGTCATACTCCACGGGTTCCGGTT +
Preference number: 5 (lower is better)
Translates to: GGLGTSPLQVQVVAT*RVHAWAGHTPRVPV
Trigger: AACCGGAACCCGTGGAGTATGACCCGCCCATGCGTGGACCCGGCAGGTTGCTACAACTTGCACTTGGAGGGGAGAGGTCCCAAGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397520.1
CDS GCA 90 bp GTAGCACATCTGAGCCAAACCATTTGGCAAGGCCCACAGGGGAGCTaGTCCTCTGGCTGGGGCGATGCTCCAGCTGGGAGTGCATGTGGG +
Preference number: 5 (lower is better)
Translates to: VAHLSQTIWQGPQGS*SSGWGDAPAGSACG
Trigger: CCCACATGCACTCCCAGCTGGAGCATCGCCCCAGCCAGAGGAGCAGCTCCCCTGTGGGCCTTGCCAAATGGTTTGGCTCAGATGTGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS-3UTR CAA 90 bp GGGGCAGGGGAAGAGGAATTCCCTCGATGCACGGGTGCTGGTGACTTGGTCACTGGGGACAAGGGGAACTaGGTGGACAGGGCGGAGAAA +
Preference number: 5 (lower is better)
Translates to: GAGEEEFPRCTGAGDLVTGDKGN*VDRAEK
Trigger: TTTCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCCC...AGTGACCAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTCTTCCCCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS CCA 90 bp TCTCCCCTCCAAGTGCAAGTTGTAGCAACCTGCCGGGTCCACGCATaGGCGGGTCATACTCCACGGGTTCCGGTTTCCACTCCCTGTGAA +
Preference number: 5 (lower is better)
Translates to: SPLQVQVVATCRVHA*AGHTPRVPVSTPCE
Trigger: TTCACAGGGAGTGGAAACCGGAACCCGTGGAGTATGACCCGCCCATGCGTGGACCCGGCAGGTTGCTACAACTTGCACTTGGAGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397520.1
CDS-3UTR CAA 90 bp CTGGTGAGCAGGCCTAACCATAGGGACATGGGGGACAAGGGGAACTTGGTGGACACGGGTGCTGGTGACTaGGTCACTCGCTGTTGCCTG +
Preference number: 5 (lower is better)
Translates to: LVSRPNHRDMGDKGNLVDTGAGD*VTRCCL
Trigger: CAGGCAACAGCGAGTGACCAAGTCACCAGCACCCGT...GTCCACCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAGGCCTGCTCACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS CCA 90 bp ATGCTGTGGATGTACTCCCTGGGCCAGCATCCTCTGTACCAACCCTaGGTGAAGCTGGTGAGCAGGCCTAACCATAGGGACATGGGGGAC +
Preference number: 5 (lower is better)
Translates to: MLWMYSLGQHPLYQP*VKLVSRPNHRDMGD
Trigger: GTCCCCCATGTCCCTATGGTTAGGCCTGCTCACCAGCTTCACCCAGGGTTGGTACAGAGGATGCTGGCCCAGGGAGTACATCCACAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS TCA 90 bp GAAGCAGGGTCCTGCCCAGTGTGCCACCACAGGTCCGGGCTTAGTTaGGTCTGCCTGCCCTGCTCACTGTCGGTATTCCAATTCATCTAC +
Preference number: 5 (lower is better)
Translates to: EAGSCPVCHHRSGLS*VCLPCSLSVFQFIY
Trigger: GTAGATGAATTGGAATACCGACAGTGAGCAGGGCAGGCAGACTCAACTAAGCCCGGACCTGTGGTGGCACACTGGGCAGGACCCTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000441289.1
ENST00000495101.5
CDS GCA 90 bp ACAGCAAGGTCATGTGGCAAGGCCAGCCCTTCTAAAGCTGCCTGTTaGAACTCCAGCTGGCTCATCTGCTGGGCTGTGATGGGGCTCATG +
Preference number: 5 (lower is better)
Translates to: TARSCGKASPSKAAC*NSSWLICWAVMGLM
Trigger: CATGAGCCCCATCACAGCCCAGCAGATGAGCCAGCTGGAGTTGCAACAGGCAGCTTTAGAAGGGCTGGCCTTGCCACATGACCTTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344710.9
ENST00000487671.1
ENST00000495101.5
CDS-3UTR CAA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTACCCACCCCGACCGGCTaGGGCTGTCTCTCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVPTPTG*GCLSSA
Trigger: GGCTGAAGAGAGACAGCCCAAGCCGGTCGGGGTGGG...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330125.10
CDS TCA 90 bp CATCCCTTGGCACTTCCTGATCAGCCGCAGGCTCCTGTGCAAGGATaGCCTCCACTTCATCCTCTTCGGCCACTCCTCCATTGCACTCTA +
Preference number: 5 (lower is better)
Translates to: HPLALPDQPQAPVQG*PPLHPLRPLLHCTL
Trigger: TAGAGTGCAATGGAGGAGTGGCCGAAGAGGATGAAGTGGAGGTCATCCTTGCACAGGAGCCTGCGGCTGATCAGGAAGTGCCAAGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS GCA 90 bp CAAGACAGCATCCCTTGGCACTTCCTGATCAGCCGCAGGCTCCTGTaGAAGGATGACCTCCACTTCATCCTCTTCGGCCACTCCTCCATT +
Preference number: 5 (lower is better)
Translates to: QDSIPWHFLISRRLL*KDDLHFILFGHSSI
Trigger: AATGGAGGAGTGGCCGAAGAGGATGAAGTGGAGGTCATCCTTGCACAGGAGCCTGCGGCTGATCAGGAAGTGCCAAGGGATGCTGTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS CCA 90 bp CTCATCTGCTGGGCTGTGATGGGGCTCATGGGTTTGCGCATGCCTTaGAATGGATCTCCGAGTAGCTGCTGTGGTCCTGGTGTGAAACCA +
Preference number: 5 (lower is better)
Translates to: LICWAVMGLMGLRMP*NGSPSSCCGPGVKP
Trigger: TGGTTTCACACCAGGACCACAGCAGCTACTCGGAGATCCATTCCAAGGCATGCGCAAACCCATGAGCCCCATCACAGCCCAGCAGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344710.9
ENST00000487671.1
ENST00000495101.5
CDS CCA 90 bp CCCAGGAGGAAGCACACCAGTTTGGAGCAAACTTGGAAGATGCTGTaGATGTACTCCCTGGGCCAGCATCCTCTGTACCAACCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: PRRKHTSLEQTWKML*MYSLGQHPLYQPWV
Trigger: CACCCAGGGTTGGTACAGAGGATGCTGGCCCAGGGAGTACATCCACAGCATCTTCCAAGTTTGCTCCAAACTGGTGTGCTTCCTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS CCA 90 bp TGGCTCATCTGGGCTGTGATGGGGCTCATGGGTTTGCGCATGCCTTaGAATGGATCTCCGAGTAGCTGCTGTGGTCCTGGTGTGAAACCA +
Preference number: 5 (lower is better)
Translates to: WLIWAVMGLMGLRMP*NGSPSSCCGPGVKP
Trigger: TGGTTTCACACCAGGACCACAGCAGCTACTCGGAGATCCATTCCAAGGCATGCGCAAACCCATGAGCCCCATCACAGCCCAGATGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
ENST00000445424.5
CDS CCA 90 bp GGAAAGCATCTCCACTTTCTGTTTCACCCATACTTCTCCTATCCATaGCTCCTTGGTCTACAATGCTCTGCACCCTGGCCCCGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: GKHLHFLFHPYFSYP*LLGLQCSAPWPRRR
Trigger: GCGGCGCCGGGGCCAGGGTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTATGGGTGAAACAGAAAGTGGAGATGCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397518.5
CDS-3UTR CAA 90 bp CTGGTGAGCAGGCCTAACCATAGGGACATGGGGGACAAGGGGAACTTGGTGGACCAGGCTGGTAGAAGTTaGCTGCCTGTACAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: LVSRPNHRDMGDKGNLVDQAGRS*LPVQQG
Trigger: ACCTTGCTGTACAGGCAGCAAACTTCTACCAGCCTG...GTCCACCAAGTTCCCCTTGTCCCCCATGTCCCTATGGTTAGGCCTGCTCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS TCA 90 bp CGGCTGTCACGTGGCAGCCCCCTCCAAAGCTCCGTCTCTGAGGGCTaGGAACAACATCTAAGTCATCTTCTTTCACACGCTCTCGTGGAT +
Preference number: 5 (lower is better)
Translates to: RLSRGSPLQSSVSEG*EQHLSHLLSHALVD
Trigger: ATCCACGAGAGCGTGTGAAAGAAGATGACTTAGATGTTGTTCTCAGCCCTCAGAGACGGAGCTTTGGAGGGGGCTGCCACGTGACAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000423097.5
CDS TCA 90 bp CGGTCTCTGTCTCTCAAGTCCCGCAGGTCCTTATCGCTAAGACGGTaGTCCTTCTCAAAGGTCCGGGCAGAGATTATCCTCCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: RSLSLKSRRSLSLRR*SFSKVRAEIILPLP
Trigger: TGGCAGTGGGAGGATAATCTCTGCCCGGACCTTTGAGAAGGATCACCGTCTTAGCGATAAGGACCTGCGGGACTTGAGAGACAGAGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000423097.5
CDS-3UTR CAA 90 bp CGGCACTGGGTACAGAGCTGGATGACAGGAGGTTTTCTTCACTGGCCTTCTGAGATGGGGCTCATGGGTTaGCGCATGCCTTGGAATGGA +
Preference number: 5 (lower is better)
Translates to: RHWVQSWMTGGFLHWPSEMGLMG*RMPWNG
Trigger: TCCATTCCAAGGCATGCGCAAACCCATGAGCCCCAT...CTCAGAAGGCCAGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CAA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGACGGGTGCTGGTGACTaGGTCACTCGCTGTTGCCTG +
Preference number: 5 (lower is better)
Translates to: HNADHTRCMGSTKQLHTETGAGD*VTRCCL
Trigger: CAGGCAACAGCGAGTGACCAAGTCACCAGCACCCGT...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS TCA 90 bp CTAACAGCGGCTGTCACGTGGCAGCCCCCTCCAAAGCTCCGTCTCTaGGGGCTGAGAACAACATCTAAGTCATCTTCTTTCACACGCTCT +
Preference number: 5 (lower is better)
Translates to: LTAAVTWQPPPKLRL*GLRTTSKSSSFTRS
Trigger: AGAGCGTGTGAAAGAAGATGACTTAGATGTTGTTCTCAGCCCTCAGAGACGGAGCTTTGGAGGGGGCTGCCACGTGACAGCCGCTGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000423097.5
CDS GCA 90 bp CCTGCCCAGTGTGCCACCACAGGTCCGGGCTTAGTTGAGTCTGCCTaGCCTGCTCACTGTCGGTATTCCAATTCATCTACACTGATAACT +
Preference number: 5 (lower is better)
Translates to: PAQCATTGPGLVESA*PAHCRYSNSSTLIT
Trigger: AGTTATCAGTGTAGATGAATTGGAATACCGACAGTGAGCAGGGCAGGCAGACTCAACTAAGCCCGGACCTGTGGTGGCACACTGGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS CCA 90 bp AAAGGTGGAACTGGATTCAGGTGTCTGTGTTCTGCCATTGACACTTaGGACTGCGTTCCAGCTTCCACCCGAGATGAAGCAGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: KGGTGFRCLCSAIDT*DCVPASTRDEAGSC
Trigger: GCAGGACCCTGCTTCATCTCGGGTGGAAGCTGGAACGCAGTCCCAAGTGTCAATGGCAGAACACAGACACCTGAATCCAGTTCCACCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441289.1
CDS-3UTR CAA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAATGGGGCTCATGGGTTaGCGCATGCCTTGGAATGGA +
Preference number: 5 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQMGLMG*RMPWNG
Trigger: TCCATTCCAAGGCATGCGCAAACCCATGAGCCCCAT...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGGGGACAAGGGGAACTaGGTGGACAGGGCGGAGAAA +
Preference number: 5 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVGDKGN*VDRAEK
Trigger: TTTCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCCC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGGGGACAAGGGGAACTaGGTGGACAGGGCGGAGAAA +
Preference number: 5 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSGDKGN*VDRAEK
Trigger: TTTCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCCC...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCTCTGAGCCAAACCATTaGGCAAGGCCCACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCSEPNH*ARPTGE
Trigger: CTCCCCTGTGGGCCTTGCCAAATGGTTTGGCTCAGA...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTCTGAGCCAAACCATTaGGCAAGGCCCACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSSEPNH*ARPTGE
Trigger: CTCCCCTGTGGGCCTTGCCAAATGGTTTGGCTCAGA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS GCA 90 bp AATTCATCTACACTGATAACTTTGGCGGGCATGGAGGGCAGGGGTTaGTGTAGCACATCTGAGCCAAACCATTTGGCAAGGCCCACAGGG +
Preference number: 5 (lower is better)
Translates to: NSSTLITLAGMEGRG*CSTSEPNHLARPTG
Trigger: CCCTGTGGGCCTTGCCAAATGGTTTGGCTCAGATGTGCTACAGCAACCCCTGCCCTCCATGCCCGCCAAAGTTATCAGTGTAGATGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS GCA 90 bp GACGGTGATCCTTCTCAAAGGTCCGGGCAGAGATTATCCTCCCACTaGCAATCCTACGTCCACCAAGCAGACGAAGCCCATCACTATCTT +
Preference number: 5 (lower is better)
Translates to: DGDPSQRSGQRLSSH*QSYVHQADEAHHYL
Trigger: AAGATAGTGATGGGCTTCGTCTGCTTGGTGGACGTAGGATTGGCAGTGGGAGGATAATCTCTGCCCGGACCTTTGAGAAGGATCACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000423097.5
CDS CCA 90 bp GGAAAGCATCTCCACTTTCTGTTTCACCCATACTTCTCCTATCCATaGCTCCTTGGTCTACAATGCTCTGCACTCGGTGCCTCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: GKHLHFLFHPYFSYP*LLGLQCSALGASAA
Trigger: AGCGGCGGAGGCACCGAGTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTATGGGTGAAACAGAAAGTGGAGATGCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330125.10
ENST00000344710.9
CDS-3UTR CAA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAACTGAAACGCTTGTCCTaGAAGTCCCTCTCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQLKRLS*KSLSRS
Trigger: AGACCGAGAGAGGGACTTCAAGGACAAGCGTTTCAG...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS CCA 90 bp TTGACCCAGAAGTTCCTGCAGGATGTTCTTAGGGACAGGCTGGCCTaGAATCTCAGCAGGGGACATCAAATGGCTTTCAAGGTTTCGGCT +
Preference number: 5 (lower is better)
Translates to: LTQKFLQDVLRDRLA*NLSRGHQMAFKVSA
Trigger: AGCCGAAACCTTGAAAGCCATTTGATGTCCCCTGCTGAGATTCCAGGCCAGCCTGTCCCTAAGAACATCCTGCAGGAACTTCTGGGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330125.10
ENST00000397525.5
CDS CCA 90 bp GGAAAGCATCTCCACTTTCTGTTTCACCCATACTTCTCCTATCCATaGCTCCTTGGTCTACAATGCTCTGCACCAATGGACGGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GKHLHFLFHPYFSYP*LLGLQCSAPMDGAS
Trigger: GCTGGCGCCGTCCATTGGTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTATGGGTGAAACAGAAAGTGGAGATGCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423097.5
CDS-3UTR CAA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAATGGGGCTCATGGGTTaGCGCATGCCTTGGAATGGA +
Preference number: 5 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTMGLMG*RMPWNG
Trigger: TCCATTCCAAGGCATGCGCAAACCCATGAGCCCCAT...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACATGGGGCTCATGGGTTaGCGCATGCCTTGGAATGGA +
Preference number: 5 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHMGLMG*RMPWNG
Trigger: TCCATTCCAAGGCATGCGCAAACCCATGAGCCCCAT...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCCAGGCTGGTAGAAGTTaGCTGCCTGTACAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCQAGRS*LPVQQG
Trigger: ACCTTGCTGTACAGGCAGCAAACTTCTACCAGCCTG...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAACTTGGTCACTCGCTGTaGCCTGTTTCTGAATCCATC +
Preference number: 5 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQLGHSL*PVSESI
Trigger: GATGGATTCAGAAACAGGCAACAGCGAGTGACCAAG...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAACGGGTGCTGGTGACTaGGTCACTCGCTGTTGCCTG +
Preference number: 5 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTTGAGD*VTRCCL
Trigger: CAGGCAACAGCGAGTGACCAAGTCACCAGCACCCGT...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACACGGGTGCTGGTGACTaGGTCACTCGCTGTTGCCTG +
Preference number: 5 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHTGAGD*VTRCCL
Trigger: CAGGCAACAGCGAGTGACCAAGTCACCAGCACCCGT...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTGATGCTGGCTCCTCCTaGCTTTTCTCTTTGCTCTCG +
Preference number: 5 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSDAGSS*LFSLLS
Trigger: CGAGAGCAAAGAGAAAAGCAAGGAGGAGCCAGCATC...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAGGGGACAAGGGGAACTaGGTGGACAGGGCGGAGAAA +
Preference number: 5 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTGDKGN*VDRAEK
Trigger: TTTCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCCC...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGCTGCTGTTGCACCATaGCCAGATGCAGAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVAAVAP*PDAEVF
Trigger: GAACACCTCTGCATCTGGCAATGGTGCAACAGCAGC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGCTGCTGTTGCACCATaGCCAGATGCAGAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTAAVAP*PDAEVF
Trigger: GAACACCTCTGCATCTGGCAATGGTGCAACAGCAGC...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCTACACTGATAACTTaGGCGGGCATGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGSTLIT*AGMEGR
Trigger: CCTGCCCTCCATGCCCGCCAAAGTTATCAGTGTAGA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGCTGAAACGCTTGTCCTaGAAGTCCCTCTCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: HNADHTRCMGSTKQLHTELKRLS*KSLSRS
Trigger: AGACCGAGAGAGGGACTTCAAGGACAAGCGTTTCAG...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS TCA 90 bp TCTGCTCGGGTTAGAGAACCACCTACTGAACCGACTGGCAGAGACTaGCCCTTCTCCCAAAACATCTTCTATCATCGAAGCCAAGCATGG +
Preference number: 5 (lower is better)
Translates to: SARVREPPTEPTGRD*PFSQNIFYHRSQAW
Trigger: CCATGCTTGGCTTCGATGATAGAAGATGTTTTGGGAGAAGGGTCAGTCTCTGCCAGTCGGTTCAGTAGGTGGTTCTCTAACCCGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS CCA 90 bp TTGACCCAGAAGTTCCTGCAGGATGTTCTTAGGGACAGGCTGGCCTaGAATCTCAGCAGGGGACATCAAATGGCTTTCAAGGTTTCGCTT +
Preference number: 5 (lower is better)
Translates to: LTQKFLQDVLRDRLA*NLSRGHQMAFKVSL
Trigger: AAGCGAAACCTTGAAAGCCATTTGATGTCCCCTGCTGAGATTCCAGGCCAGCCTGTCCCTAAGAACATCCTGCAGGAACTTCTGGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS CCA 90 bp TCGCTGTTGCCTGTTTCTGAATCCATCTCTGGTTCTGTCCACCTGTaGTTTGCCAAAACCAGGCTGGTAGAAGTTTGCTGCCTGTACAGC +
Preference number: 5 (lower is better)
Translates to: SLLPVSESISGSVHL*FAKTRLVEVCCLYS
Trigger: GCTGTACAGGCAGCAAACTTCTACCAGCCTGGTTTTGGCAAACCACAGGTGGACAGAACCAGAGATGGATTCAGAAACAGGCAACAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
ENST00000487671.1
ENST00000495101.5
CDS CCA 90 bp CCAACGTGTTCCGCTCTCATCACACAGGTCTCAAAGATCTGGGGATaGAAAGACCGTTCACATGTACATGCAAAGTCCCCTCAGAGATCC +
Preference number: 5 (lower is better)
Translates to: PTCSALITQVSKIWG*KDRSHVHAKSPQRS
Trigger: GGATCTCTGAGGGGACTTTGCATGTACATGTGAACGGTCTTTCCATCCCCAGATCTTTGAGACCTGTGTGATGAGAGCGGAACACGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495101.5
CDS CCA 90 bp TTGACCCAGAAGTTCCTGCAGGATGTTCTTAGGGACAGGCTGGCCTaGAATCTCAGCAGGGGACATCAAATGGCTTTCAAGGTTTCGCTA +
Preference number: 5 (lower is better)
Translates to: LTQKFLQDVLRDRLA*NLSRGHQMAFKVSL
Trigger: TAGCGAAACCTTGAAAGCCATTTGATGTCCCCTGCTGAGATTCCAGGCCAGCCTGTCCCTAAGAACATCCTGCAGGAACTTCTGGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495101.5
CDS-3UTR CAA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTACCTATCCATGGCTCCTaGGTCTACAATGCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVPIHGS*VYNALH
Trigger: GTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGG...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGCCTATCCATGGCTCCTaGGTCTACAATGCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGPIHGS*VYNALH
Trigger: GTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGG...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTCCTATCCATGGCTCCTaGGTCTACAATGCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSPIHGS*VYNALH
Trigger: GTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGG...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGCTCTTCATGTGGTGTaGACCCAAGACTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTALHVV*TQDCWI
Trigger: GATCCAGCAGTCTTGGGTCAACACCACATGAAGAGC...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCTTCATGTGGTGTaGACCCAAGACTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSALHVV*TQDCWI
Trigger: GATCCAGCAGTCTTGGGTCAACACCACATGAAGAGC...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACGCTCTTCATGTGGTGTaGACCCAAGACTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHALHVV*TQDCWI
Trigger: GATCCAGCAGTCTTGGGTCAACACCACATGAAGAGC...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACGTGCTCACTAGCTTGTaGAACGCAGTCATGTCTCCG +
Preference number: 5 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHVLTSL*NAVMSP
Trigger: CGGAGACATGACTGCGTTCAACAAGCTAGTGAGCAC...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGTGCTCACTAGCTTGTaGAACGCAGTCATGTCTCCG +
Preference number: 5 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTVLTSL*NAVMSP
Trigger: CGGAGACATGACTGCGTTCAACAAGCTAGTGAGCAC...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGGTGCTCACTAGCTTGTaGAACGCAGTCATGTCTCCG +
Preference number: 5 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGVLTSL*NAVMSP
Trigger: CGGAGACATGACTGCGTTCAACAAGCTAGTGAGCAC...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTACAGGCTGGTAGAAGTTaGCTGCCTGTACAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVQAGRS*LPVQQG
Trigger: ACCTTGCTGTACAGGCAGCAAACTTCTACCAGCCTG...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAGATGCTGGCTCCTCCTaGCTTTTCTCTTTGCTCTCG +
Preference number: 5 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVDAGSS*LFSLLS
Trigger: CGAGAGCAAAGAGAAAAGCAAGGAGGAGCCAGCATC...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGGGGACAAGGGGAACTaGGTGGACAGGGCGGAGAAA +
Preference number: 5 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLGDKGN*VDRAEK
Trigger: TTTCTCCGCCCTGTCCACCAAGTTCCCCTTGTCCCC...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACTCTGAGCCAAACCATTaGGCAAGGCCCACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHSEPNH*ARPTGE
Trigger: CTCCCCTGTGGGCCTTGCCAAATGGTTTGGCTCAGA...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTTGGTTTCAGACTGACTaGTGGGTCCAGCAGAGAACC +
Preference number: 5 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSWFQTD*WVQQRT
Trigger: GGTTCTCTGCTGGACCCACAAGTCAGTCTGAAACCA...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACTCGGCCACTCCTCCATaGCACTCTACTATACCTTCC +
Preference number: 5 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHSATPP*HSTIPS
Trigger: GGAAGGTATAGTAGAGTGCAATGGAGGAGTGGCCGA...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAAGGTCTCTGAACTGGTaGACCCAGAAGTTCGCTGAC +
Preference number: 5 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTRSLNW*TQKFAD
Trigger: GTCAGCGAACTTCTGGGTCAACCAGTTCAGAGACCT...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397523.5
CDS GCA 90 bp GTCTCTTCTAGGTGTTCTGCCATGAAGGGAGTTGAATTCTTCACTTaGTGGTCAACCTTCAAGCCCTTCAGACCTGCTTCTACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VSSRCSAMKGVEFFT*WSTFKPFRPASTSS
Trigger: GGAGGAGGTAGAAGCAGGTCTGAAGGGCTTGAAGGTTGACCAGCAAGTGAAGAATTCAACTCCCTTCATGGCAGAACACCTAGAAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS CCA 90 bp CCTATGCAGCCTCTGCGTCACAGATTTCCCAGCCTGGGATTAGGCTaGCAAGAGAAAGAACATGGCCAGAAATATAACTTGGAGCAACAG +
Preference number: 5 (lower is better)
Translates to: PMQPLRHRFPSLGLG*QEKEHGQKYNLEQQ
Trigger: CTGTTGCTCCAAGTTATATTTCTGGCCATGTTCTTTCTCTTGCCAGCCTAATCCCAGGCTGGGAAATCTGTGACGCAGAGGCTGCATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475437.1
CDS CCA 90 bp CTTAGACCAACGTGTTCCGCTCTCATCACACAGGTCTCAAAGATCTaGGGATGGAAAGACCGTTCACATGTACATGCAAAGTCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: LRPTCSALITQVSKI*GWKDRSHVHAKSPQ
Trigger: CTGAGGGGACTTTGCATGTACATGTGAACGGTCTTTCCATCCCCAGATCTTTGAGACCTGTGTGATGAGAGCGGAACACGTTGGTCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495101.5
CDS-3UTR CAA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCGGCCACTCCTCCATaGCACTCTACTATACCTACT +
Preference number: 5 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGSATPP*HSTIPT
Trigger: AGTAGGTATAGTAGAGTGCAATGGAGGAGTGGCCGA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS-3UTR CAA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGCAAGACAGCATCCCTaGGCACTTCCTGATCAGCCG +
Preference number: 5 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLARQHP*ALPDQP
Trigger: CGGCTGATCAGGAAGTGCCAAGGGATGCTGTCTTGC...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCGCAAGACAGCATCCCTaGGCACTTCCTGATCAGCCG +
Preference number: 5 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFARQHP*ALPDQP
Trigger: CGGCTGATCAGGAAGTGCCAAGGGATGCTGTCTTGC...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCTCCGTCTTTCTTCAGTaGTCGATTGTTGGTTACGGC +
Preference number: 5 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCSVFLQ*SIVGYG
Trigger: GCCGTAACCAACAATCGACAACTGAAGAAAGACGGA...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAATTGTGCTCACTAGCTaGTTGAACGCAGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQIVLTS*LNAVMS
Trigger: AGACATGACTGCGTTCAACAAGCTAGTGAGCACAAT...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACATTGGTGATGGTATTCTaGGGCGAAGGTAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: HHNADHTRCMGSTKQLHTLVMVF*GEGSQL
Trigger: CAGCTGACTACCTTCGCCCAAGAATACCATCACCAA...TGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGCTTGGTCACTCGCTGTaGCCTGTTTCTGAATCCATC +
Preference number: 5 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGLGHSL*PVSESI
Trigger: GATGGATTCAGAAACAGGCAACAGCGAGTGACCAAG...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTACGGGTGCTGGTGACTaGGTCACTCGCTGTTGCCTG +
Preference number: 5 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVTGAGD*VTRCCL
Trigger: CAGGCAACAGCGAGTGACCAAGTCACCAGCACCCGT...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp AACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCTCTGTAATGCTGACATCCTTGCTTTTCTCTTaGCTCTCGTACATCTTACGA +
Preference number: 5 (lower is better)
Translates to: NGWPGTVGWNTKTSVMLTSLLFS*LSYILR
Trigger: TCGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGGA...TGTCAGCATTACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CAA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTATCTCTCCTGAAACGCTaGTCCTTGAAGTCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVSLLKR*SLKSLS
Trigger: AGAGAGGGACTTCAAGGACAAGCGTTTCAGGAGAGA...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGAAGGCAAAGTCCCACTaGCCTTCATTGTGCTCACTA +
Preference number: 5 (lower is better)
Translates to: HNADHTRCMGSTKQLHTEKAKSH*PSLCSL
Trigger: TAGTGAGCACAATGAAGGCAAGTGGGACTTTGCCTT...CTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS CCA 90 bp TCTTCTAGGTGTTCTGCCATGAAGGGAGTTGAATTCTTCACTTGCTaGTCAACCTTCAAGCCCTTCAGACCTGCTTCTACCTCCTCCACT +
Preference number: 5 (lower is better)
Translates to: SSRCSAMKGVEFFTC*STFKPFRPASTSST
Trigger: AGTGGAGGAGGTAGAAGCAGGTCTGAAGGGCTTGAAGGTTGACCAGCAAGTGAAGAATTCAACTCCCTTCATGGCAGAACACCTAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS-3UTR CAA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACCCTATCCATGGCTCCTaGGTCTACAATGCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHPIHGS*VYNALH
Trigger: GTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGG...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAGCAAGACAGCATCCCTaGGCACTTCCTGATCAGCCG +
Preference number: 5 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSARQHP*ALPDQP
Trigger: CGGCTGATCAGGAAGTGCCAAGGGATGCTGTCTTGC...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACTTCAGTTGTCGATTGTaGGTTACGGCACTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHFSCRL*VTALKV
Trigger: GACCTTGAGTGCCGTAACCAACAATCGACAACTGAA...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACTCCGTCTTTCTTCAGTaGTCGATTGTTGGTTACGGC +
Preference number: 5 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHSVFLQ*SIVGYG
Trigger: GCCGTAACCAACAATCGACAACTGAAGAAAGACGGA...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CACACAGAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCGTCTTTCTTCAGTaGTCGATTGTTGGTTACGGC +
Preference number: 5 (lower is better)
Translates to: HTECSKVKAHKPTRDEAGSVFLQ*SIVGYG
Trigger: GCCGTAACCAACAATCGACAACTGAAGAAAGACGGA...CCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAATCCTTGCTTTTCTCTTaGCTCTCGTACATCTTACGA +
Preference number: 5 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQSLLFS*LSYILR
Trigger: TCGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGGA...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACGATGCTGGCTCCTCCTaGCTTTTCTCTTTGCTCTCG +
Preference number: 5 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHDAGSS*LFSLLS
Trigger: CGAGAGCAAAGAGAAAAGCAAGGAGGAGCCAGCATC...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CGGCACTGGGTACAGAGCTGGATGACAGGAGGTTTTCTTCACTGGCCTTCTGAGTGTAATGCTGACAGTTaGGAATTTGTAGTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: RHWVQSWMTGGFLHWPSECNADS*EFVVGE
Trigger: TTCTCCCACTACAAATTCCAAACTGTCAGCATTACA...CTCAGAAGGCCAGTGAAGAAAACCTCCTGTCATCCAGCTCTGTACCCAGTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CAA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTAGGAAGCACACCAGTTaGGAGCAAACTTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSRKHTS*EQTWKM
Trigger: CATCTTCCAAGTTTGCTCCAAACTGGTGTGCTTCCT...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCGCTGCTGTTGCACCATaGCCAGATGCAGAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFAAVAP*PDAEVF
Trigger: GAACACCTCTGCATCTGGCAATGGTGCAACAGCAGC...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCTCTGAGCCAAACCATTaGGCAAGGCCCACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: TLCILYSDNVHSTRLVKISEPNH*ARPTGE
Trigger: CTCCCCTGTGGGCCTTGCCAAATGGTTTGGCTCAGA...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGTCTACACTGATAACTTaGGCGGGCATGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLSTLIT*AGMEGR
Trigger: CCTGCCCTCCATGCCCGCCAAAGTTATCAGTGTAGA...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTAAAGGCAAAGTCCCACTaGCCTTCATTGTGCTCACTA +
Preference number: 5 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVKAKSH*PSLCSL
Trigger: TAGTGAGCACAATGAAGGCAAGTGGGACTTTGCCTT...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TGCCAAGGTGGGTGTTTTTCTCCCAGTTGCTTTAGGTCGATAATCTTGTTCTTTCTTGGTCACTCGCTGTaGCCTGTCAGCTCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: CQGGCFSPSCFRSIILFFLGHSL*PVSSGQ
Trigger: TTGGCCAGAGCTGACAGGCAACAGCGAGTGACCAAG...AAAGAACAAGATTATCGACCTAAAGCAACTGGGAGAAAAACACCCACCTTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS TCA 90 bp GATTGTTGGTTACGGCACTCAAGGTCTCTTCTAGGTGTTCTGCCATaGAGGGAGTTGAATTCTTCACTTGCTGGTCAACCTTCAAGCCCT +
Preference number: 5 (lower is better)
Translates to: DCWLRHSRSLLGVLP*RELNSSLAGQPSSP
Trigger: AGGGCTTGAAGGTTGACCAGCAAGTGAAGAATTCAACTCCCTTCATGGCAGAACACCTAGAAGAGACCTTGAGTGCCGTAACCAACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS TCA 90 bp GAGAAGGCAAAGTCCCACTTGCCTTCATTGTGCTCACTAGCTTGTTaGACGCAGTCATGTCTCCGTCTTTCTTCAGTTGTCGATTGTTGG +
Preference number: 5 (lower is better)
Translates to: EKAKSHLPSLCSLAC*TQSCLRLSSVVDCW
Trigger: CCAACAATCGACAACTGAAGAAAGACGGAGACATGACTGCGTTCAACAAGCTAGTGAGCACAATGAAGGCAAGTGGGACTTTGCCTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS-3UTR CAA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACCCAAGAGTTCTTCTTTaGTATAGCGATGGGGGCATT +
Preference number: 5 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHPRVLL*YSDGGI
Trigger: AATGCCCCCATCGCTATACAAAAGAAGAACTCTTGG...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGCTCTTCATGTGGTGTaGACCCAAGACTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLALHVV*TQDCWI
Trigger: GATCCAGCAGTCTTGGGTCAACACCACATGAAGAGC...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAGGTTTCAAATCCACTTaGGCTTTCTGTAGCATTTCT +
Preference number: 5 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQGFKST*AFCSIS
Trigger: AGAAATGCTACAGAAAGCCAAAGTGGATTTGAAACC...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTTTCTTCAGTTGTCGATaGTTGGTTACGGCACTCAAG +
Preference number: 5 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSFFSCR*LVTALK
Trigger: CTTGAGTGCCGTAACCAACAATCGACAACTGAAGAA...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACATTGTGCTCACTAGCTaGTTGAACGCAGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHIVLTS*LNAVMS
Trigger: AGACATGACTGCGTTCAACAAGCTAGTGAGCACAAT...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACTTGGTGATGGTATTCTaGGGCGAAGGTAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHLVMVF*GEGSQL
Trigger: CAGCTGACTACCTTCGCCCAAGAATACCATCACCAA...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCAGGCTGGTAGAAGTTaGCTGCCTGTACAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: CASCIQTMYTPLDWLRSFQAGRS*LPVQQG
Trigger: ACCTTGCTGTACAGGCAGCAAACTTCTACCAGCCTG...GAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTTCCTTGCTTTTCTCTTaGCTCTCGTACATCTTACGA +
Preference number: 5 (lower is better)
Translates to: PHQMHGFHQTASHRVLQSSLLFS*LSYILR
Trigger: TCGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGGA...ACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TCTTTGCTCTCGTACATCTTACGAATCACTGAGGTAGGGGTAAAGGAAGGAGAAGATGCTGGCTCCTCCTaGCTTTTCTCTTTGCTCTCG +
Preference number: 5 (lower is better)
Translates to: SLLSYILRITEVGVKEGEDAGSS*LFSLLS
Trigger: CGAGAGCAAAGAGAAAAGCAAGGAGGAGCCAGCATC...TTCTCCTTCCTTTACCCCTACCTCAGTGATTCGTAAGATGTACGAGAGCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CAA 90 bp GGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAATGTAATGCTGACAGTTaGGAATTTGTAGTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: GPHQMHGFHQTASHRVLQCNADS*EFVVGE
Trigger: TTCTCCCACTACAAATTCCAAACTGTCAGCATTACA...TTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CTTTGGTGTAACGGTTGGCCTGGGACAGTGGGGTGGAACACGAAGACCTCTGTATTTAGGTCGATAATCTaGTTCTTTGGTGTAACGGTT +
Preference number: 5 (lower is better)
Translates to: LWCNGWPGTVGWNTKTSVFRSII*FFGVTV
Trigger: AACCGTTACACCAAAGAACAAGATTATCGACCTAAA...TACAGAGGTCTTCGTGTTCCACCCCACTGTCCCAGGCCAACCGTTACACCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445424.5
CDS-3UTR CAA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAGCTGCTGTTGCACCATaGCCAGATGCAGAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSAAVAP*PDAEVF
Trigger: GAACACCTCTGCATCTGGCAATGGTGCAACAGCAGC...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTTCTACACTGATAACTTaGGCGGGCATGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVSTLIT*AGMEGR
Trigger: CCTGCCCTCCATGCCCGCCAAAGTTATCAGTGTAGA...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATCTACACTGATAACTTaGGCGGGCATGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSSTLIT*AGMEGR
Trigger: CCTGCCCTCCATGCCCGCCAAAGTTATCAGTGTAGA...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGTGGTTTCAGACTGACTaGTGGGTCCAGCAGAGAACC +
Preference number: 5 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLWFQTD*WVQQRT
Trigger: GGTTCTCTGCTGGACCCACAAGTCAGTCTGAAACCA...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGTCGGCCACTCCTCCATaGCACTCTACTATACCTTCC +
Preference number: 5 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLSATPP*HSTIPS
Trigger: GGAAGGTATAGTAGAGTGCAATGGAGGAGTGGCCGA...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS GCA 90 bp ACAGGTCTCAAAGATCTGGGGATGGAAAGACCGTTCACATGTACATaGAAAGTCCCCTCAGAGATCCTCACTATGCTAATCCTAAGTCCA +
Preference number: 5 (lower is better)
Translates to: TGLKDLGMERPFTCT*KVPSEILTMLILSP
Trigger: TGGACTTAGGATTAGCATAGTGAGGATCTCTGAGGGGACTTTGCATGTACATGTGAACGGTCTTTCCATCCCCAGATCTTTGAGACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495101.5
CDS-3UTR CAA 90 bp GAGTGCTCCAAAGTAAAAGCCCATAAACCAACCCGAGATGAAGCAGGGTCCTGCGGTTTCAAATCCACTTaGGCTTTCTGTAGCATTTCT +
Preference number: 5 (lower is better)
Translates to: ECSKVKAHKPTRDEAGSCGFKST*AFCSIS
Trigger: AGAAATGCTACAGAAAGCCAAAGTGGATTTGAAACC...GCAGGACCCTGCTTCATCTCGGGTTGGTTTATGGGCTTTTACTTTGGAGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACTTCAGTTGTCGATTGTaGGTTACGGCACTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHFSCRL*VTALKV
Trigger: GACCTTGAGTGCCGTAACCAACAATCGACAACTGAA...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACATCCGTCTTTCTTCAGTaGTCGATTGTTGGTTACGGC +
Preference number: 5 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTSVFLQ*SIVGYG
Trigger: GCCGTAACCAACAATCGACAACTGAAGAAAGACGGA...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCGTGCTCACTAGCTTGTaGAACGCAGTCATGTCTCCG +
Preference number: 5 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIVLTSL*NAVMSP
Trigger: CGGAGACATGACTGCGTTCAACAAGCTAGTGAGCAC...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGTTGGTGATGGTATTCTaGGGCGAAGGTAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLLVMVF*GEGSQL
Trigger: CAGCTGACTACCTTCGCCCAAGAATACCATCACCAA...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCAGGCTGGTAGAAGTTaGCTGCCTGTACAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIQAGRS*LPVQQG
Trigger: ACCTTGCTGTACAGGCAGCAAACTTCTACCAGCCTG...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGCTTGGTCACTCGCTGTaGCCTGTTTCTGAATCCATC +
Preference number: 5 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLLGHSL*PVSESI
Trigger: GATGGATTCAGAAACAGGCAACAGCGAGTGACCAAG...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTTCCTTGCTTTTCTCTTaGCTCTCGTACATCTTACGA +
Preference number: 5 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSSLLFS*LSYILR
Trigger: TCGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGGA...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAAGGAAGCACACCAGTTaGGAGCAAACTTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTRKHTS*EQTWKM
Trigger: CATCTTCCAAGTTTGCTCCAAACTGGTGTGCTTCCT...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCACTGAAACGCTTGTCCTaGAAGTCCCTCTCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSLKRLS*KSLSRS
Trigger: AGACCGAGAGAGGGACTTCAAGGACAAGCGTTTCAG...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATCGGCCACTCCTCCATaGCACTCTACTATACCTTCC +
Preference number: 5 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSSATPP*HSTIPS
Trigger: GGAAGGTATAGTAGAGTGCAATGGAGGAGTGGCCGA...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACAAAGGCAAAGTCCCACTaGCCTTCATTGTGCTCACTA +
Preference number: 5 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTKAKSH*PSLCSL
Trigger: TAGTGAGCACAATGAAGGCAAGTGGGACTTTGCCTT...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TTCCATCATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACGGTTTCAAATCCACTTaGGCTTTCTGTAGCATTTCT +
Preference number: 5 (lower is better)
Translates to: FHHNADHTRCMGSTKQLHGFKST*AFCSIS
Trigger: AGAAATGCTACAGAAAGCCAAAGTGGATTTGAAACC...GTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTATGATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACATTCTTCAGTTGTCGATaGTTGGTTACGGCACTCAAG +
Preference number: 5 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTFFSCR*LVTALK
Trigger: CTTGAGTGCCGTAACCAACAATCGACAACTGAAGAA...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACATTGTGCTCACTAGCTaGTTGAACGCAGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHIVLTS*LNAVMS
Trigger: AGACATGACTGCGTTCAACAAGCTAGTGAGCACAAT...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCACTTGGTCACTCGCTGTaGCCTGTTTCTGAATCCATC +
Preference number: 5 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSLGHSL*PVSESI
Trigger: GATGGATTCAGAAACAGGCAACAGCGAGTGACCAAG...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTTGTAATGCTGACAGTTaGGAATTTGTAGTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSCNADS*EFVVGE
Trigger: TTCTCCCACTACAAATTCCAAACTGTCAGCATTACA...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp CACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTGCTCCAAAGTATGTAATGCTGACAGTTaGGAATTTGTAGTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: HTRCMGSTKQLHTECSKVCNADS*EFVVGE
Trigger: TTCTCCCACTACAAATTCCAAACTGTCAGCATTACA...TACTTTGGAGCACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTTCTCTCCTGAAACGCTaGTCCTTGAAGTCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVSLLKR*SLKSLS
Trigger: AGAGAGGGACTTCAAGGACAAGCGTTTCAGGAGAGA...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS TCA 90 bp TCAAATGGCTTTCAAGGTTTCGCTTCATTGTGCTCACTAGCTTGTTaGACGCAGTCATGTCTCCGTCTTTCTTCAGTTGTCGATTGTTGG +
Preference number: 5 (lower is better)
Translates to: SNGFQGFASLCSLAC*TQSCLRLSSVVDCW
Trigger: CCAACAATCGACAACTGAAGAAAGACGGAGACATGACTGCGTTCAACAAGCTAGTGAGCACAATGAAGCGAAACCTTGAAAGCCATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS TCA 90 bp TGTGAACTCATCTCGTGCCTTGCACCTATTAACGTTGGTTCAACATaGAGGGGAAGTAAGATAAGTGGAAGAGGATACACAGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: CELISCLAPINVGST*RGSKISGRGYTGKV
Trigger: CACCTTTCCTGTGTATCCTCTTCCACTTATCTTACTTCCCCTTCATGTTGAACCAACGTTAATAGGTGCAAGGCACGAGATGAGTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441289.1
CDS CCA 90 bp TGTGATCTTCTTCTAGTATCTTATCATCAAAGCCAGTCAGTTCGATaGTTTCAGACTGACTTGTGGGTCCAGCAGAGAACCACTCTGGTT +
Preference number: 5 (lower is better)
Translates to: CDLLLVSYHQSQSVR*FQTDLWVQQRTTLV
Trigger: AACCAGAGTGGTTCTCTGCTGGACCCACAAGTCAGTCTGAAACCATCGAACTGACTGGCTTTGATGATAAGATACTAGAAGAAGATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCTTCAGTTGTCGATTGTaGGTTACGGCACTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIFSCRL*VTALKV
Trigger: GACCTTGAGTGCCGTAACCAACAATCGACAACTGAA...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATAATGCGGACCACACCAGATGCATGGGTTCCACCAAACAGCTTCACACAGAGTTTTAGGTCGATAATCTaGTTCTTTGGTGTAACGGTT +
Preference number: 5 (lower is better)
Translates to: IMRTTPDAWVPPNSFTQSFRSII*FFGVTV
Trigger: AACCGTTACACCAAAGAACAAGATTATCGACCTAAA...ACTCTGTGTGAAGCTGTTTGGTGGAACCCATGCATCTGGTGTGGTCCGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCAAGGAAGCACACCAGTTaGGAGCAAACTTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSRKHTS*EQTWKM
Trigger: CATCTTCCAAGTTTGCTCCAAACTGGTGTGCTTCCT...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCAGGAAGCACACCAGTTaGGAGCAAACTTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIRKHTS*EQTWKM
Trigger: CATCTTCCAAGTTTGCTCCAAACTGGTGTGCTTCCT...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS CCA 90 bp GGAAAGCATCTCCACTTTCTGTTTCACCCATACTTCTCCTATCCATaGCTCCTTGGTCTACAATGCTCTGCACATTTTAAAATGAAGGGT +
Preference number: 5 (lower is better)
Translates to: GKHLHFLFHPYFSYP*LLGLQCSAHFKMKG
Trigger: ACCCTTCATTTTAAAATGTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTATGGGTGAAACAGAAAGTGGAGATGCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397520.1
CDS-3UTR CAA 90 bp TTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTTTCTTCAGTTGTCGATaGTTGGTTACGGCACTCAAG +
Preference number: 5 (lower is better)
Translates to: LTTLCILYSDNVHSTRLVFFSCR*LVTALK
Trigger: CTTGAGTGCCGTAACCAACAATCGACAACTGAAGAA...AACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATTCTTCAGTTGTCGATaGTTGGTTACGGCACTCAAG +
Preference number: 5 (lower is better)
Translates to: ILYSDNVHSTRLVKILPSFFSCR*LVTALK
Trigger: CTTGAGTGCCGTAACCAACAATCGACAACTGAAGAA...TGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp GGATTGACAACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGTCCTTGCTTTTCTCTTaGCTCTCGTACATCTTACGA +
Preference number: 5 (lower is better)
Translates to: GLTTLCILYSDNVHSTRLSLLFS*LSYILR
Trigger: TCGTAAGATGTACGAGAGCAAAGAGAAAAGCAAGGA...CAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGTTGTCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACAATGTACACTCCACTCGACTGGTTAAGATCCTTCCATCATAATGCGGACCACTTTAGGTCGATAATCTaGTTCTTTGGTGTAACGGTT +
Preference number: 5 (lower is better)
Translates to: TMYTPLDWLRSFHHNADHFRSII*FFGVTV
Trigger: AACCGTTACACCAAAGAACAAGATTATCGACCTAAA...GTGGTCCGCATTATGATGGAAGGATCTTAACCAGTCGAGTGGAGTGTACATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp TACATTTATTTCCTCAGAACCCTTAGGTGCCACCTCTTGGTGAGGACACCAACATTTAGGTCGATAATCTaGTTCTTTGGTGTAACGGTT +
Preference number: 5 (lower is better)
Translates to: YIYFLRTLRCHLLVRTPTFRSII*FFGVTV
Trigger: AACCGTTACACCAAAGAACAAGATTATCGACCTAAA...TGTTGGTGTCCTCACCAAGAGGTGGCACCTAAGGGTTCTGAGGAAATAAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCTGTAATGCTGACAGTTaGGAATTTGTAGTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: TLCILYSDNVHSTRLVKICNADS*EFVVGE
Trigger: TTCTCCCACTACAAATTCCAAACTGTCAGCATTACA...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS-3UTR CAA 90 bp ACATTGTGCATCCTGTATTCAGACAATGTACACTCCACTCGACTGGTTAAGATCTTTAGGTCGATAATCTaGTTCTTTGGTGTAACGGTT +
Preference number: 5 (lower is better)
Translates to: TLCILYSDNVHSTRLVKIFRSII*FFGVTV
Trigger: AACCGTTACACCAAAGAACAAGATTATCGACCTAAA...GATCTTAACCAGTCGAGTGGAGTGTACATTGTCTGAATACAGGATGCACAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS TCA 72 bp GCGATGCTCCAGCTGGGAGTGCATGTGGGGCAGGCCTaGCCGGCTGGGCACGTTCTGAGGGGTTGTCTGAAC +
Preference number: 6 (lower is better)
Translates to: AMLQLGVHVGQA*PAGHVLRGCLN
Trigger: GTTCAGACAACCCCTCAGAACGTGCCCAGCCGGTCAGGCCTGCCCCACATGCACTCCCAGCTGGAGCATCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS CCA 72 bp ATTTGGCAAGGCCCACAGGGGAGCTGCTCCTCTGGCTaGGGCGATGCTCCAGCTGGGAGTGCATGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: IWQGPQGSCSSG*GDAPAGSACGA
Trigger: TGCCCCACATGCACTCCCAGCTGGAGCATCGCCCCAGCCAGAGGAGCAGCTCCCCTGTGGGCCTTGCCAAAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS GCA 72 bp CTGAGCCAAACCATTTGGCAAGGCCCACAGGGGAGCTaGTCCTCTGGCTGGGGCGATGCTCCAGCTGGGAGT +
Preference number: 6 (lower is better)
Translates to: LSQTIWQGPQGS*SSGWGDAPAGS
Trigger: ACTCCCAGCTGGAGCATCGCCCCAGCCAGAGGAGCAGCTCCCCTGTGGGCCTTGCCAAATGGTTTGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS GCA 72 bp GGGACCTCTCCCCTCCAAGTGCAAGTTGTAGCAACCTaGCGGGTCCACGCATGGGCGGGTCATACTCCACGG +
Preference number: 6 (lower is better)
Translates to: GTSPLQVQVVAT*RVHAWAGHTPR
Trigger: CCGTGGAGTATGACCCGCCCATGCGTGGACCCGGCAGGTTGCTACAACTTGCACTTGGAGGGGAGAGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397520.1
CDS GCA 72 bp GGTCTACAATGCTCTGCACCAATGGACGGCGCCAGCTaGCCCTTGTTATCCGGCGATCAGGGACTGGGGACG +
Preference number: 6 (lower is better)
Translates to: GLQCSAPMDGAS*PLLSGDQGLGT
Trigger: CGTCCCCAGTCCCTGATCGCCGGATAACAAGGGGCAGCTGGCGCCGTCCATTGGTGCAGAGCATTGTAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423097.5
CDS TCA 72 bp TCCTGCCCAGTGTGCCACCACAGGTCCGGGCTTAGTTaGGTCTGCCTGCCCTGCTCACTGTCGGTATTCCAA +
Preference number: 6 (lower is better)
Translates to: SCPVCHHRSGLS*VCLPCSLSVFQ
Trigger: TTGGAATACCGACAGTGAGCAGGGCAGGCAGACTCAACTAAGCCCGGACCTGTGGTGGCACACTGGGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000441289.1
ENST00000495101.5
CDS GCA 72 bp GGGCACGTTCTGAGGGGTTGTCTGAACGCTGACAGCTaGTGCATGGGAACCAGAGCCTGGAGGATGCAGAAC +
Preference number: 6 (lower is better)
Translates to: GHVLRGCLNADS*CMGTRAWRMQN
Trigger: GTTCTGCATCCTCCAGGCTCTGGTTCCCATGCAGCAGCTGTCAGCGTTCAGACAACCCCTCAGAACGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS CCA 72 bp CAAGTGCAAGTTGTAGCAACCTGCCGGGTCCACGCATaGGCGGGTCATACTCCACGGGTTCCGGTTTCCACT +
Preference number: 6 (lower is better)
Translates to: QVQVVATCRVHA*AGHTPRVPVST
Trigger: AGTGGAAACCGGAACCCGTGGAGTATGACCCGCCCATGCGTGGACCCGGCAGGTTGCTACAACTTGCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397520.1
CDS CAA 90 bp AACTCCAGCTGGCTCATCTGCTGGGCTGTGATGGGGCTCATGGGTTaGCGCATGCCTTGGAATGGATCTCCGAGTAGCTGCTGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: NSSWLICWAVMGLMG*RMPWNGSPSSCCGP
Trigger: AGGACCACAGCAGCTACTCGGAGATCCATTCCAAGGCATGCGCAAACCCATGAGCCCCATCACAGCCCAGCAGATGAGCCAGCTGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344710.9
ENST00000487671.1
ENST00000495101.5
CDS CAA 90 bp TGCAACTCCAGCTGGCTCATCTGGGCTGTGATGGGGCTCATGGGTTaGCGCATGCCTTGGAATGGATCTCCGAGTAGCTGCTGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: CNSSWLIWAVMGLMG*RMPWNGSPSSCCGP
Trigger: AGGACCACAGCAGCTACTCGGAGATCCATTCCAAGGCATGCGCAAACCCATGAGCCCCATCACAGCCCAGATGAGCCAGCTGGAGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
ENST00000445424.5
CDS TCA 72 bp GCACTTCCTGATCAGCCGCAGGCTCCTGTGCAAGGATaGCCTCCACTTCATCCTCTTCGGCCACTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: ALPDQPQAPVQG*PPLHPLRPLLH
Trigger: ATGGAGGAGTGGCCGAAGAGGATGAAGTGGAGGTCATCCTTGCACAGGAGCCTGCGGCTGATCAGGAAGTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS GCA 72 bp ATCCCTTGGCACTTCCTGATCAGCCGCAGGCTCCTGTaGAAGGATGACCTCCACTTCATCCTCTTCGGCCAC +
Preference number: 6 (lower is better)
Translates to: IPWHFLISRRLL*KDDLHFILFGH
Trigger: GTGGCCGAAGAGGATGAAGTGGAGGTCATCCTTGCACAGGAGCCTGCGGCTGATCAGGAAGTGCCAAGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS CCA 72 bp TGGGCTGTGATGGGGCTCATGGGTTTGCGCATGCCTTaGAATGGATCTCCGAGTAGCTGCTGTGGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: WAVMGLMGLRMP*NGSPSSCCGPG
Trigger: ACCAGGACCACAGCAGCTACTCGGAGATCCATTCCAAGGCATGCGCAAACCCATGAGCCCCATCACAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
ENST00000445424.5
ENST00000487671.1
ENST00000495101.5
CDS CCA 72 bp TCTGTTTCACCCATACTTCTCCTATCCATGGCTCCTTaGTCTACAATGCTCTGCACCCTGGCCCCGGCGCCG +
Preference number: 6 (lower is better)
Translates to: SVSPILLLSMAP*STMLCTLAPAP
Trigger: CGGCGCCGGGGCCAGGGTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTATGGGTGAAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397518.5
CDS CAA 72 bp TGGCTCATCTGCTGGGCTGTGATGGGGCTCATGGGTTaGCGCATGCCTTGGAATGGATCTCCGAGTAGCTGC +
Preference number: 6 (lower is better)
Translates to: WLICWAVMGLMG*RMPWNGSPSSC
Trigger: GCAGCTACTCGGAGATCCATTCCAAGGCATGCGCAAACCCATGAGCCCCATCACAGCCCAGCAGATGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344710.9
ENST00000487671.1
ENST00000495101.5
CDS CAA 72 bp AGCTGGCTCATCTGGGCTGTGATGGGGCTCATGGGTTaGCGCATGCCTTGGAATGGATCTCCGAGTAGCTGC +
Preference number: 6 (lower is better)
Translates to: SWLIWAVMGLMG*RMPWNGSPSSC
Trigger: GCAGCTACTCGGAGATCCATTCCAAGGCATGCGCAAACCCATGAGCCCCATCACAGCCCAGATGAGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
ENST00000445424.5
CDS GCA 72 bp TCATGTGGCAAGGCCAGCCCTTCTAAAGCTGCCTGTTaGAACTCCAGCTGGCTCATCTGCTGGGCTGTGATG +
Preference number: 6 (lower is better)
Translates to: SCGKASPSKAAC*NSSWLICWAVM
Trigger: CATCACAGCCCAGCAGATGAGCCAGCTGGAGTTGCAACAGGCAGCTTTAGAAGGGCTGGCCTTGCCACATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344710.9
ENST00000487671.1
ENST00000495101.5
CDS GCA 72 bp CCTGGAGGATGCAGAACTGAGCGCTGTAGCTGCTGTTaGACCATTGCCAGATGCAGAGGTGTTCCAGGACGA +
Preference number: 6 (lower is better)
Translates to: PGGCRTERCSCC*TIARCRGVPGR
Trigger: TCGTCCTGGAACACCTCTGCATCTGGCAATGGTGCAACAGCAGCTACAGCGCTCAGTTCTGCATCCTCCAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS CAA 90 bp AGCCTGGAGGATGCAGAACTGAGCGCTGTAGCTGCTGTTGCACCATaGCCAGATGCAGAGGTGTTCCAGGACGAGGGTTTAAGAGAGGGT +
Preference number: 6 (lower is better)
Translates to: SLEDAELSAVAAVAP*PDAEVFQDEGLREG
Trigger: ACCCTCTCTTAAACCCTCGTCCTGGAACACCTCTGCATCTGGCAATGGTGCAACAGCAGCTACAGCGCTCAGTTCTGCATCCTCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS TCA 72 bp AGGGGAAGAGGAATTCCCTCGATGCACGGGTGCTGGTaGCTTGGTCACTCGCTGTTGCCTGTTTCTGAATCC +
Preference number: 6 (lower is better)
Translates to: RGRGIPSMHGCW*LGHSLLPVSES
Trigger: GGATTCAGAAACAGGCAACAGCGAGTGACCAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTCTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
ENST00000487671.1
ENST00000495101.5
CDS GCA 72 bp ACTGAGCGCTGTAGCTGCTGTTGCACCATTGCCAGATaGAGAGGTGTTCCAGGACGAGGGTTTAAGAGAGGG +
Preference number: 6 (lower is better)
Translates to: TERCSCCCTIAR*RGVPGRGFKRG
Trigger: CCCTCTCTTAAACCCTCGTCCTGGAACACCTCTGCATCTGGCAATGGTGCAACAGCAGCTACAGCGCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS GCA 72 bp CCTTCTCAAAGGTCCGGGCAGAGATTATCCTCCCACTaGCAATCCTACGTCCACCAAGCAGACGAAGCCCAT +
Preference number: 6 (lower is better)
Translates to: PSQRSGQRLSSH*QSYVHQADEAH
Trigger: ATGGGCTTCGTCTGCTTGGTGGACGTAGGATTGGCAGTGGGAGGATAATCTCTGCCCGGACCTTTGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000423097.5
CDS CCA 72 bp TCTGTTTCACCCATACTTCTCCTATCCATGGCTCCTTaGTCTACAATGCTCTGCACTCGGTGCCTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: SVSPILLLSMAP*STMLCTRCLRR
Trigger: GCGGCGGAGGCACCGAGTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTATGGGTGAAACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330125.10
ENST00000344710.9
CDS TCA 72 bp CGTGGCAGCCCCCTCCAAAGCTCCGTCTCTGAGGGCTaGGAACAACATCTAAGTCATCTTCTTTCACACGCT +
Preference number: 6 (lower is better)
Translates to: RGSPLQSSVSEG*EQHLSHLLSHA
Trigger: AGCGTGTGAAAGAAGATGACTTAGATGTTGTTCTCAGCCCTCAGAGACGGAGCTTTGGAGGGGGCTGCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000423097.5
CDS TCA 72 bp GCTGTCACGTGGCAGCCCCCTCCAAAGCTCCGTCTCTaGGGGCTGAGAACAACATCTAAGTCATCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: AVTWQPPPKLRL*GLRTTSKSSSF
Trigger: GAAAGAAGATGACTTAGATGTTGTTCTCAGCCCTCAGAGACGGAGCTTTGGAGGGGGCTGCCACGTGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000423097.5
CDS GCA 72 bp ACACTGATAACTTTGGCGGGCATGGAGGGCAGGGGTTaGTGTAGCACATCTGAGCCAAACCATTTGGCAAGG +
Preference number: 6 (lower is better)
Translates to: TLITLAGMEGRG*CSTSEPNHLAR
Trigger: CCTTGCCAAATGGTTTGGCTCAGATGTGCTACAGCAACCCCTGCCCTCCATGCCCGCCAAAGTTATCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS GCA 72 bp TGTGCCACCACAGGTCCGGGCTTAGTTGAGTCTGCCTaGCCTGCTCACTGTCGGTATTCCAATTCATCTACA +
Preference number: 6 (lower is better)
Translates to: CATTGPGLVESA*PAHCRYSNSST
Trigger: TGTAGATGAATTGGAATACCGACAGTGAGCAGGGCAGGCAGACTCAACTAAGCCCGGACCTGTGGTGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000441289.1
ENST00000495101.5
CDS CAA 72 bp CCAGACCTGCAAGTCTCTCTAGCTCTTCATGTGGTGTaGACCCAAGACTGCTGGATCGGCTTCCTGATCTGC +
Preference number: 6 (lower is better)
Translates to: PDLQVSLALHVV*TQDCWIGFLIC
Trigger: GCAGATCAGGAAGCCGATCCAGCAGTCTTGGGTCAACACCACATGAAGAGCTAGAGAGACTTGCAGGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS CAA 72 bp GATGCAGAACTGAGCGCTGTAGCTGCTGTTGCACCATaGCCAGATGCAGAGGTGTTCCAGGACGAGGGTTTA +
Preference number: 6 (lower is better)
Translates to: DAELSAVAAVAP*PDAEVFQDEGL
Trigger: TAAACCCTCGTCCTGGAACACCTCTGCATCTGGCAATGGTGCAACAGCAGCTACAGCGCTCAGTTCTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS CAA 72 bp AAGGTGGAACTGGATTCAGGTGTCTGTGTTCTGCCATaGACACTTGGGACTGCGTTCCAGCTTCCACCCGAG +
Preference number: 6 (lower is better)
Translates to: KVELDSGVCVLP*TLGTAFQLPPE
Trigger: CTCGGGTGGAAGCTGGAACGCAGTCCCAAGTGTCAATGGCAGAACACAGACACCTGAATCCAGTTCCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441289.1
CDS CAA 90 bp TGGTTCTGTCCACCTGTGGTTTGCCAAAACCAGGCTGGTAGAAGTTaGCTGCCTGTACAGCAAGGTCATGTGGCAAGGCCAGCCCTTCTA +
Preference number: 6 (lower is better)
Translates to: WFCPPVVCQNQAGRS*LPVQQGHVARPALL
Trigger: TAGAAGGGCTGGCCTTGCCACATGACCTTGCTGTACAGGCAGCAAACTTCTACCAGCCTGGTTTTGGCAAACCACAGGTGGACAGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
ENST00000445424.5
ENST00000487671.1
ENST00000495101.5
CDS CAA 90 bp TGCCCTGCTCACTGTCGGTATTCCAATTCATCTACACTGATAACTTaGGCGGGCATGGAGGGCAGGGGTTGCTGTAGCACATCTGAGCCA +
Preference number: 6 (lower is better)
Translates to: CPAHCRYSNSSTLIT*AGMEGRGCCSTSEP
Trigger: TGGCTCAGATGTGCTACAGCAACCCCTGCCCTCCATGCCCGCCAAAGTTATCAGTGTAGATGAATTGGAATACCGACAGTGAGCAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS GCA 72 bp GGTTTGCGCATGCCTTGGAATGGATCTCCGAGTAGCTaGTGTGGTCCTGGTGTGAAACCAATTGGTGATGGT +
Preference number: 6 (lower is better)
Translates to: GLRMPWNGSPSS*CGPGVKPIGDG
Trigger: ACCATCACCAATTGGTTTCACACCAGGACCACAGCAGCTACTCGGAGATCCATTCCAAGGCATGCGCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
ENST00000445424.5
ENST00000487671.1
ENST00000495101.5
CDS CCA 72 bp AAAGAGATGAGCCTGGCATTTCTAATTCGGGGGCCTTaGGACCTCTCCCCTCCAAGTGCAAGTTGTAGCAAC +
Preference number: 6 (lower is better)
Translates to: KEMSLAFLIRGP*DLSPPSASCSN
Trigger: GTTGCTACAACTTGCACTTGGAGGGGAGAGGTCCCAAGGCCCCCGAATTAGAAATGCCAGGCTCATCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397520.1
CDS CCA 72 bp CTCCACTTTCTGTTTCACCCATACTTCTCCTATCCATaGCTCCTTGGTCTACAATGCTCTGCACCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: LHFLFHPYFSYP*LLGLQCSAPWP
Trigger: GGGCCAGGGTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTATGGGTGAAACAGAAAGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397518.5
CDS CCA 72 bp TCTGTTTCACCCATACTTCTCCTATCCATGGCTCCTTaGTCTACAATGCTCTGCACCAATGGACGGCGCCAG +
Preference number: 6 (lower is better)
Translates to: SVSPILLLSMAP*STMLCTNGRRQ
Trigger: CTGGCGCCGTCCATTGGTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTATGGGTGAAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423097.5
CDS CCA 72 bp ACTGGATTCAGGTGTCTGTGTTCTGCCATTGACACTTaGGACTGCGTTCCAGCTTCCACCCGAGATGAAGCA +
Preference number: 6 (lower is better)
Translates to: TGFRCLCSAIDT*DCVPASTRDEA
Trigger: TGCTTCATCTCGGGTGGAAGCTGGAACGCAGTCCCAAGTGTCAATGGCAGAACACAGACACCTGAATCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441289.1
CDS CAA 72 bp ATGACCTCCACTTCATCCTCTTCGGCCACTCCTCCATaGCACTCTACTATACCTACTATCCTGCGCACCAGG +
Preference number: 6 (lower is better)
Translates to: MTSTSSSSATPP*HSTIPTILRTR
Trigger: CCTGGTGCGCAGGATAGTAGGTATAGTAGAGTGCAATGGAGGAGTGGCCGAAGAGGATGAAGTGGAGGTCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS CAA 72 bp GAAGAGGAATTCCCTCGATGCACGGGTGCTGGTGACTaGGTCACTCGCTGTTGCCTGTTTCTGAATCCATCT +
Preference number: 6 (lower is better)
Translates to: EEEFPRCTGAGD*VTRCCLFLNPS
Trigger: AGATGGATTCAGAAACAGGCAACAGCGAGTGACCAAGTCACCAGCACCCGTGCATCGAGGGAATTCCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
ENST00000487671.1
ENST00000495101.5
CDS CAA 90 bp TACACAGGAAAGGTGGAACTGGATTCAGGTGTCTGTGTTCTGCCATaGACACTTGGGACTGCGTTCCAGCTTCCACCCGAGATGAAGCAG +
Preference number: 6 (lower is better)
Translates to: YTGKVELDSGVCVLP*TLGTAFQLPPEMKQ
Trigger: CTGCTTCATCTCGGGTGGAAGCTGGAACGCAGTCCCAAGTGTCAATGGCAGAACACAGACACCTGAATCCAGTTCCACCTTTCCTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441289.1
CDS GCA 72 bp CTTGCTTACAACTGTGTGATAATGGGGACATGCCTATaGAGCCTCTGCGTCACAGATTTCCCAGCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: LAYNCVIMGTCL*SLCVTDFPAWD
Trigger: ATCCCAGGCTGGGAAATCTGTGACGCAGAGGCTGCATAGGCATGTCCCCATTATCACACAGTTGTAAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475437.1
CDS CCA 72 bp CTCCACTTTCTGTTTCACCCATACTTCTCCTATCCATaGCTCCTTGGTCTACAATGCTCTGCACTCGGTGCC +
Preference number: 6 (lower is better)
Translates to: LHFLFHPYFSYP*LLGLQCSALGA
Trigger: GGCACCGAGTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTATGGGTGAAACAGAAAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330125.10
ENST00000344710.9
CDS CCA 72 bp CAAAGTAATTCCCCGAGTTCTGTCCAGGAGAGAGGATaGCTTGCTCCAGACCTGCAAGTCTCTCTAGCTCTT +
Preference number: 6 (lower is better)
Translates to: QSNSPSSVQERG*LAPDLQVSLAL
Trigger: AAGAGCTAGAGAGACTTGCAGGTCTGGAGCAAGCCATCCTCTCTCCTGGACAGAACTCGGGGAATTACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS CCA 72 bp ACAGGCTGGCCTGGAATCTCAGCAGGGGACATCAAATaGCTTTCAAGGTTTCGCTTCATTGTGCTCACTAGC +
Preference number: 6 (lower is better)
Translates to: TGWPGISAGDIK*LSRFRFIVLTS
Trigger: GCTAGTGAGCACAATGAAGCGAAACCTTGAAAGCCATTTGATGTCCCCTGCTGAGATTCCAGGCCAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS CAA 72 bp CACTGTCGGTATTCCAATTCATCTACACTGATAACTTaGGCGGGCATGGAGGGCAGGGGTTGCTGTAGCACA +
Preference number: 6 (lower is better)
Translates to: HCRYSNSSTLIT*AGMEGRGCCST
Trigger: TGTGCTACAGCAACCCCTGCCCTCCATGCCCGCCAAAGTTATCAGTGTAGATGAATTGGAATACCGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000495101.5
CDS CAA 72 bp ATGACCTCCACTTCATCCTCTTCGGCCACTCCTCCATaGCACTCTACTATACCTTCCTTCACAGAGGCTGTC +
Preference number: 6 (lower is better)
Translates to: MTSTSSSSATPP*HSTIPSFTEAV
Trigger: GACAGCCTCTGTGAAGGAAGGTATAGTAGAGTGCAATGGAGGAGTGGCCGAAGAGGATGAAGTGGAGGTCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS GCA 72 bp TTATCCCTTGCTTACAACTGTGTGATAATGGGGACATaGCTATGCAGCCTCTGCGTCACAGATTTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: LSLAYNCVIMGT*LCSLCVTDFPA
Trigger: GGCTGGGAAATCTGTGACGCAGAGGCTGCATAGGCATGTCCCCATTATCACACAGTTGTAAGCAAGGGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475437.1
CDS CCA 72 bp CAAAGCCAGTCAGTTCGATGGTTTCAGACTGACTTGTaGGTCCAGCAGAGAACCACTCTGGTTCTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: QSQSVRWFQTDL*VQQRTTLVLLL
Trigger: CAGAAGAAGAACCAGAGTGGTTCTCTGCTGGACCCACAAGTCAGTCTGAAACCATCGAACTGACTGGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS CCA 72 bp TCCGCTCTCATCACACAGGTCTCAAAGATCTGGGGATaGAAAGACCGTTCACATGTACATGCAAAGTCCCCT +
Preference number: 6 (lower is better)
Translates to: SALITQVSKIWG*KDRSHVHAKSP
Trigger: AGGGGACTTTGCATGTACATGTGAACGGTCTTTCCATCCCCAGATCTTTGAGACCTGTGTGATGAGAGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495101.5
CDS CAA 72 bp ACTCAGAAGATTGGAAGAAGCAGGTCTCTGAACTGGTaGACCCAGAAGTTCGCTGACTTTGGGCTGAGAAGG +
Preference number: 6 (lower is better)
Translates to: TQKIGRSRSLNW*TQKFADFGLRR
Trigger: CCTTCTCAGCCCAAAGTCAGCGAACTTCTGGGTCAACCAGTTCAGAGACCTGCTTCTTCCAATCTTCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397523.5
CDS TCA 72 bp GTTAGAGAACCACCTACTGAACCGACTGGCAGAGACTaGCCCTTCTCCCAAAACATCTTCTATCATCGAAGC +
Preference number: 6 (lower is better)
Translates to: VREPPTEPTGRD*PFSQNIFYHRS
Trigger: GCTTCGATGATAGAAGATGTTTTGGGAGAAGGGTCAGTCTCTGCCAGTCGGTTCAGTAGGTGGTTCTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS TCA 72 bp ATCAAATGGCTTTCAAGGTTTCGGCTGACTTTGGGCTaGGAAGGCAAAGTCCCACTTGCCTTCATTGTGCTC +
Preference number: 6 (lower is better)
Translates to: IKWLSRFRLTLG*EGKVPLAFIVL
Trigger: GAGCACAATGAAGGCAAGTGGGACTTTGCCTTCTCAGCCCAAAGTCAGCCGAAACCTTGAAAGCCATTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397525.5
ENST00000418321.1
CDS GCA 72 bp AGGTGTTCTGCCATGAAGGGAGTTGAATTCTTCACTTaGTGGTCAACCTTCAAGCCCTTCAGACCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: RCSAMKGVEFFT*WSTFKPFRPAS
Trigger: AGAAGCAGGTCTGAAGGGCTTGAAGGTTGACCAGCAAGTGAAGAATTCAACTCCCTTCATGGCAGAACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS CCA 72 bp CCAAGAGTTCTTCTTTTGTATAGCGATGGGGGCATTTaGAGGCAGGAGGCTTCTTCAGGTCAAGGAAAGCAT +
Preference number: 6 (lower is better)
Translates to: PRVLLLYSDGGI*RQEASSGQGKH
Trigger: ATGCTTTCCTTGACCTGAAGAAGCCTCCTGCCTCCAAATGCCCCCATCGCTATACAAAAGAAGAACTCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397518.5
ENST00000397520.1
ENST00000397523.5
ENST00000397525.5
ENST00000423097.5
CDS CCA 72 bp TGTTCTGCCATGAAGGGAGTTGAATTCTTCACTTGCTaGTCAACCTTCAAGCCCTTCAGACCTGCTTCTACC +
Preference number: 6 (lower is better)
Translates to: CSAMKGVEFFTC*STFKPFRPAST
Trigger: GGTAGAAGCAGGTCTGAAGGGCTTGAAGGTTGACCAGCAAGTGAAGAATTCAACTCCCTTCATGGCAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS CCA 72 bp CCTCTGCGTCACAGATTTCCCAGCCTGGGATTAGGCTaGCAAGAGAAAGAACATGGCCAGAAATATAACTTG +
Preference number: 6 (lower is better)
Translates to: PLRHRFPSLGLG*QEKEHGQKYNL
Trigger: CAAGTTATATTTCTGGCCATGTTCTTTCTCTTGCCAGCCTAATCCCAGGCTGGGAAATCTGTGACGCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475437.1
CDS CAA 72 bp CATCAAAGCCAGTCAGTTCGATGGTTTCAGACTGACTaGTGGGTCCAGCAGAGAACCACTCTGGTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: HQSQSVRWFQTD*WVQQRTTLVLL
Trigger: AAGAAGAACCAGAGTGGTTCTCTGCTGGACCCACAAGTCAGTCTGAAACCATCGAACTGACTGGCTTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS CAA 72 bp GGCAAAGTCCCACTTGCCTTCATTGTGCTCACTAGCTaGTTGAACGCAGTCATGTCTCCGTCTTTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: GKVPLAFIVLTS*LNAVMSPSFFS
Trigger: ACTGAAGAAAGACGGAGACATGACTGCGTTCAACAAGCTAGTGAGCACAATGAAGGCAAGTGGGACTTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS CAA 90 bp AGCTTGTTGAACGCAGTCATGTCTCCGTCTTTCTTCAGTTGTCGATaGTTGGTTACGGCACTCAAGGTCTCTTCTAGGTGTTCTGCCATG +
Preference number: 6 (lower is better)
Translates to: SLLNAVMSPSFFSCR*LVTALKVSSRCSAM
Trigger: CATGGCAGAACACCTAGAAGAGACCTTGAGTGCCGTAACCAACAATCGACAACTGAAGAAAGACGGAGACATGACTGCGTTCAACAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS CAA 90 bp TTGTTGAACGCAGTCATGTCTCCGTCTTTCTTCAGTTGTCGATTGTaGGTTACGGCACTCAAGGTCTCTTCTAGGTGTTCTGCCATGAAG +
Preference number: 6 (lower is better)
Translates to: LLNAVMSPSFFSCRL*VTALKVSSRCSAMK
Trigger: CTTCATGGCAGAACACCTAGAAGAGACCTTGAGTGCCGTAACCAACAATCGACAACTGAAGAAAGACGGAGACATGACTGCGTTCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS TCA 72 bp TTACGGCACTCAAGGTCTCTTCTAGGTGTTCTGCCATaGAGGGAGTTGAATTCTTCACTTGCTGGTCAACCT +
Preference number: 6 (lower is better)
Translates to: LRHSRSLLGVLP*RELNSSLAGQP
Trigger: AGGTTGACCAGCAAGTGAAGAATTCAACTCCCTTCATGGCAGAACACCTAGAAGAGACCTTGAGTGCCGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS TCA 72 bp AAGTCCCACTTGCCTTCATTGTGCTCACTAGCTTGTTaGACGCAGTCATGTCTCCGTCTTTCTTCAGTTGTC +
Preference number: 6 (lower is better)
Translates to: KSHLPSLCSLAC*TQSCLRLSSVV
Trigger: GACAACTGAAGAAAGACGGAGACATGACTGCGTTCAACAAGCTAGTGAGCACAATGAAGGCAAGTGGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS CCA 72 bp ATCAAGGTTAAAGAACTCATTAAAGTCAAAGTCTCCTaGGGACTGCTCAGGCAAGACAGCATCCCTTGGCAC +
Preference number: 6 (lower is better)
Translates to: IKVKELIKVKVS*GLLRQDSIPWH
Trigger: GTGCCAAGGGATGCTGTCTTGCCTGAGCAGTCCCCAGGAGACTTTGACTTTAATGAGTTCTTTAACCTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
CDS CCA 72 bp CAGTCATGTCTCCGTCTTTCTTCAGTTGTCGATTGTTaGTTACGGCACTCAAGGTCTCTTCTAGGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: QSCLRLSSVVDC*LRHSRSLLGVL
Trigger: CAGAACACCTAGAAGAGACCTTGAGTGCCGTAACCAACAATCGACAACTGAAGAAAGACGGAGACATGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS CAA 72 bp GCAGTCATGTCTCCGTCTTTCTTCAGTTGTCGATTGTaGGTTACGGCACTCAAGGTCTCTTCTAGGTGTTCT +
Preference number: 6 (lower is better)
Translates to: AVMSPSFFSCRL*VTALKVSSRCS
Trigger: AGAACACCTAGAAGAGACCTTGAGTGCCGTAACCAACAATCGACAACTGAAGAAAGACGGAGACATGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS CAA 72 bp AACGCAGTCATGTCTCCGTCTTTCTTCAGTTGTCGATaGTTGGTTACGGCACTCAAGGTCTCTTCTAGGTGT +
Preference number: 6 (lower is better)
Translates to: NAVMSPSFFSCR*LVTALKVSSRC
Trigger: ACACCTAGAAGAGACCTTGAGTGCCGTAACCAACAATCGACAACTGAAGAAAGACGGAGACATGACTGCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS CAA 72 bp CTTGTTGAACGCAGTCATGTCTCCGTCTTTCTTCAGTaGTCGATTGTTGGTTACGGCACTCAAGGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: LVERSHVSVFLQ*SIVGYGTQGLF
Trigger: GAAGAGACCTTGAGTGCCGTAACCAACAATCGACAACTGAAGAAAGACGGAGACATGACTGCGTTCAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330125.10
ENST00000344710.9
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS GCA 72 bp AAAGATCTGGGGATGGAAAGACCGTTCACATGTACATaGAAAGTCCCCTCAGAGATCCTCACTATGCTAATC +
Preference number: 6 (lower is better)
Translates to: KDLGMERPFTCT*KVPSEILTMLI
Trigger: GATTAGCATAGTGAGGATCTCTGAGGGGACTTTGCATGTACATGTGAACGGTCTTTCCATCCCCAGATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495101.5
CDS CCA 72 bp CTTCTAGTATCTTATCATCAAAGCCAGTCAGTTCGATaGTTTCAGACTGACTTGTGGGTCCAGCAGAGAACC +
Preference number: 6 (lower is better)
Translates to: LLVSYHQSQSVR*FQTDLWVQQRT
Trigger: GGTTCTCTGCTGGACCCACAAGTCAGTCTGAAACCATCGAACTGACTGGCTTTGATGATAAGATACTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
CDS CAA 72 bp TGGCTTTCAAGGTTTCGCTTCATTGTGCTCACTAGCTaGTTGAACGCAGTCATGTCTCCGTCTTTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: WLSRFRFIVLTS*LNAVMSPSFFS
Trigger: ACTGAAGAAAGACGGAGACATGACTGCGTTCAACAAGCTAGTGAGCACAATGAAGCGAAACCTTGAAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS CAA 72 bp AAAGTCCCACTTGCCTTCATTGTGCTCACTAGCTTGTaGAACGCAGTCATGTCTCCGTCTTTCTTCAGTTGT +
Preference number: 6 (lower is better)
Translates to: KVPLAFIVLTSL*NAVMSPSFFSC
Trigger: ACAACTGAAGAAAGACGGAGACATGACTGCGTTCAACAAGCTAGTGAGCACAATGAAGGCAAGTGGGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330125.10
ENST00000397523.5
ENST00000397525.5
ENST00000418321.1
CDS TCA 72 bp TTTCAAGGTTTCGCTTCATTGTGCTCACTAGCTTGTTaGACGCAGTCATGTCTCCGTCTTTCTTCAGTTGTC +
Preference number: 6 (lower is better)
Translates to: FQGFASLCSLAC*TQSCLRLSSVV
Trigger: GACAACTGAAGAAAGACGGAGACATGACTGCGTTCAACAAGCTAGTGAGCACAATGAAGCGAAACCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS CAA 72 bp CTTTCAAGGTTTCGCTTCATTGTGCTCACTAGCTTGTaGAACGCAGTCATGTCTCCGTCTTTCTTCAGTTGT +
Preference number: 6 (lower is better)
Translates to: LSRFRFIVLTSL*NAVMSPSFFSC
Trigger: ACAACTGAAGAAAGACGGAGACATGACTGCGTTCAACAAGCTAGTGAGCACAATGAAGCGAAACCTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344710.9
CDS TCA 72 bp ATCTCGTGCCTTGCACCTATTAACGTTGGTTCAACATaGAGGGGAAGTAAGATAAGTGGAAGAGGATACACA +
Preference number: 6 (lower is better)
Translates to: ISCLAPINVGST*RGSKISGRGYT
Trigger: TGTGTATCCTCTTCCACTTATCTTACTTCCCCTTCATGTTGAACCAACGTTAATAGGTGCAAGGCACGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441289.1
CDS CCA 72 bp CTCCACTTTCTGTTTCACCCATACTTCTCCTATCCATaGCTCCTTGGTCTACAATGCTCTGCACATTTTAAA +
Preference number: 6 (lower is better)
Translates to: LHFLFHPYFSYP*LLGLQCSAHFK
Trigger: TTTAAAATGTGCAGAGCATTGTAGACCAAGGAGCCATGGATAGGAGAAGTATGGGTGAAACAGAAAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397520.1
CDS CAA 90 bp CTTTCAGGATGCCTTCTATATCCTCAGCTTCTCTTAACTTTTATTTaGCACATCCTTCCAGCACTGATTGCTTGTGAACTCATCTCGTGC +
Preference number: 6 (lower is better)
Translates to: LSGCLLYPQLLLTFI*HILPALIACELISC
Trigger: GCACGAGATGAGTTCACAAGCAATCAGTGCTGGAAGGATGTGCAAAATAAAAGTTAAGAGAAGCTGAGGATATAGAAGGCATCCTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441289.1