Pregenerated sensors for EIF4EBP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000243056Ensembl transcript IDs: ENST00000310331.3
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGTTAAGGGCTTGGCAAGTTGCCCACTCCTATCCCTGGTCTAGCTaGCTCAGAACTAAAGGAGGCCTGGAACTAACAAGTCACTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: ELRAWQVAHSYPWSS*LRTKGGLELTSHSL Trigger: AAGGGAGTGACTTGTTAGTTCCAGGCCTCCTTTAGTTCTGAGGCAGCTAGACCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTTAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| 3UTR CCA 90 bp | GAGGAAGTAGAGTTAAGGGCTTGGCAAGTTGCCCACTCCTATCCCTaGTCTAGCTGCCTCAGAACTAAAGGAGGCCTGGAACTAACAAGT | + |
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Preference number: 1 (lower is better) Translates to: EEVELRAWQVAHSYP*SSCLRTKGGLELTS Trigger: ACTTGTTAGTTCCAGGCCTCCTTTAGTTCTGAGGCAGCTAGACCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| 3UTR-3UTR GCA 90 bp | TCCCCAGTTCCAGCCCCTGAGCATAGAGGGTTTAGGGTTAGGAGGAGTACCACAAAGGGCTTGGCAAGTTaGCCACTCCTATCCCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: SPVPAPEHRGFRVRRSTTKGLAS*PLLSLV Trigger: GACCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTT...TGTGGTACTCCTCCTAACCCTAAACCCTCTATGCTCAGGGGCTGGAACTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| 3UTR-3UTR GCA 90 bp | CCCCAGTTCCAGCCCCTGAGCATAGAGGGTTTAGGGTTAGGAGGAGTACCACAGTATCCCTGGTCTAGCTaGCTCAGAACTAAAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: PQFQPLSIEGLGLGGVPQYPWSS*LRTKGG Trigger: GCCTCCTTTAGTTCTGAGGCAGCTAGACCAGGGATA...CTGTGGTACTCCTCCTAACCCTAAACCCTCTATGCTCAGGGGCTGGAACTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCCTGAGCATAGAGGGTTTAGGGTTAGGAGGAGTACCACAGACTGAAGAGTTAGATGAGGCCAGCTaGCCTTTGGATGCCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QPLSIEGLGLGGVPQTEELDEAS*PLDAPG Trigger: TCCTGGGGCATCCAAAGGCCAGCTGGCCTCATCTAA...CTCTTCAGTCTGTGGTACTCCTCCTAACCCTAAACCCTCTATGCTCAGGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGAAGAGGAAGTAGAGTTAAGGGCTTGGCAAGTTGCCCACTCCTATCCCTGGCCCTTCCAGATTAGATaGGGCCAGCTGGCCTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: TEEEVELRAWQVAHSYPWPFQIR*GQLAFG Trigger: TCCAAAGGCCAGCTGGCCTCATCTAATCTGGAAGGG...CCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACTTCCTCTTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| 3UTR-3UTR CCA 90 bp | CCACAGACTGAAGAGGAAGTAGAGTTAAGGGCTTGGCAAGTTGCCCACTCCTATAGGTGGTGGCAGCAGTaGCATGAGGGATCCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: PQTEEEVELRAWQVAHSYRWWQQ*HEGSLC Trigger: ACAGAGGGATCCCTCATGCCACTGCTGCCACCACCT...ATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACTTCCTCTTCAGTCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAACTAACAAGTCACTCCCTTCCAGATTAGATGAGGCCAGCTGGCCTTTGCTCTGTAACTCCACATaGCAGGTCATCTGCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: PGTNKSLPSRLDEASWPLLCNST*QVICTG Trigger: TCCAGTGCAGATGACCTGGCATGTGGAGTTACAGAG...CAAAGGCCAGCTGGCCTCATCTAATCTGGAAGGGAGTGACTTGTTAGTTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| 3UTR CCA 72 bp | GAGTTAAGGGCTTGGCAAGTTGCCCACTCCTATCCCTaGTCTAGCTGCCTCAGAACTAAAGGAGGCCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: ELRAWQVAHSYP*SSCLRTKGGLE Trigger: TTCCAGGCCTCCTTTAGTTCTGAGGCAGCTAGACCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTTAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| 3UTR GCA 72 bp | GCTTGGCAAGTTGCCCACTCCTATCCCTGGTCTAGCTaGCTCAGAACTAAAGGAGGCCTGGAACTAACAAGT | + |
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Preference number: 3 (lower is better) Translates to: AWQVAHSYPWSS*LRTKGGLELTS Trigger: ACTTGTTAGTTCCAGGCCTCCTTTAGTTCTGAGGCAGCTAGACCAGGGATAGGAGTGGGCAACTTGCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| 3UTR CCA 72 bp | GTACCACAGACTGAAGAGGAAGTAGAGTTAAGGGCTTaGCAAGTTGCCCACTCCTATCCCTGGTCTAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: VPQTEEEVELRA*QVAHSYPWSSC Trigger: GCAGCTAGACCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACTTCCTCTTCAGTCTGTGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR TCA 90 bp | GGTGGCAGCAGTGGCATGAGGGATCCCTCTGTAACTCCACATGCCAGGTCATCTTGTCCGGGCAATGGGTaGGTTCTTGCACTCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GGSSGMRDPSVTPHARSSCPGNG*VLALQQ Trigger: CTGCTGGAGTGCAAGAACTCACCCATTGCCCGGACA...AGATGACCTGGCATGTGGAGTTACAGAGGGATCCCTCATGCCACTGCTGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR CCA 90 bp | GAAGTAGAGTTAAGGGCTTGGCAAGTTGCCCACTCCTATCCCTGGTCTAGCTGCGGAGAGAGGGGCTGTTaGAGGAGTTGTGACCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: EVELRAWQVAHSYPWSSCGERGC*RSCDPG Trigger: CCCGGGGTCACAACTCCTCCAACAGCCCCTCTCTCC...GCAGCTAGACCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR CCA 90 bp | GGTGGCAGCAGTGGCATGAGGGATCCCTCTGTAACTCCACATGCCAGGTCATCTAGGTGGTGGCAGCAGTaGCATGAGGGATCCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GGSSGMRDPSVTPHARSSRWWQQ*HEGSLC Trigger: ACAGAGGGATCCCTCATGCCACTGCTGCCACCACCT...AGATGACCTGGCATGTGGAGTTACAGAGGGATCCCTCATGCCACTGCTGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR TCA 90 bp | TCTAGCTGCCTCAGAACTAAAGGAGGCCTGGAACTAACAAGTCACTCCCTTCCAGTAACCGCCTGGCGTTaGGGTCGAGGAGCGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SSCLRTKGGLELTSHSLPVTAWR*GRGAQL Trigger: GAGCTGCGCTCCTCGACCTCAACGCCAGGCGGTTAC...TGGAAGGGAGTGACTTGTTAGTTCCAGGCCTCCTTTAGTTCTGAGGCAGCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR TCA 90 bp | GAAGTAGAGTTAAGGGCTTGGCAAGTTGCCCACTCCTATCCCTGGTCTAGCTGCGCAGCTAGTGGACGTTaGCATAGCGAGCGGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: EVELRAWQVAHSYPWSSCAASGR*HSEREE Trigger: CTCCTCCCGCTCGCTATGTCAACGTCCACTAGCTGC...GCAGCTAGACCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR CCA 90 bp | CCAGTTCCAGCCCCTGAGCATAGAGGGTTTAGGGTTAGGAGGAGTACCACAGACGGGGTGTCCGGGCAATaGGTGAGTTCTTGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: PVPAPEHRGFRVRRSTTDGVSGQ*VSSCTP Trigger: TGGAGTGCAAGAACTCACCCATTGCCCGGACACCCC...GTCTGTGGTACTCCTCCTAACCCTAAACCCTCTATGCTCAGGGGCTGGAACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR TCA 90 bp | ACTGAAGAGGAAGTAGAGTTAAGGGCTTGGCAAGTTGCCCACTCCTATCCCTGGACTTTCGGTCGTAGATaGTCCTGGTGCCTCCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: TEEEVELRAWQVAHSYPWTFGRR*SWCLRG Trigger: CCCCCGGAGGCACCAGGATCATCTACGACCGAAAGT...CCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACTTCCTCTTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR CCA 90 bp | AACAAGTCACTCCCTTCCAGATTAGATGAGGCCAGCTGGCCTTTGGATGCCCCATCAGCTCCTCCAGCTTaGAGAGAGGGGCTGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NKSLPSRLDEASWPLDAPSAPPA*REGLLE Trigger: CTCCAACAGCCCCTCTCTCCAAGCTGGAGGAGCTGA...TGGGGCATCCAAAGGCCAGCTGGCCTCATCTAATCTGGAAGGGAGTGACTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR TCA 90 bp | CCTGGAACTAACAAGTCACTCCCTTCCAGATTAGATGAGGCCAGCTGGCCTTTGCTGTTGGAGGAGTTGTaGCCCCGGGAATCTGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PGTNKSLPSRLDEASWPLLLEEL*PRESEG Trigger: TCCCTCAGATTCCCGGGGTCACAACTCCTCCAACAG...CAAAGGCCAGCTGGCCTCATCTAATCTGGAAGGGAGTGACTTGTTAGTTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR CCA 90 bp | GAAGTAGAGTTAAGGGCTTGGCAAGTTGCCCACTCCTATCCCTGGTCTAGCTGCTTAGATGAGGCCAGCTaGCCTTTGGATGCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: EVELRAWQVAHSYPWSSCLDEAS*PLDAPG Trigger: TCCTGGGGCATCCAAAGGCCAGCTGGCCTCATCTAA...GCAGCTAGACCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR CCA 90 bp | GAAGTAGAGTTAAGGGCTTGGCAAGTTGCCCACTCCTATCCCTGGTCTAGCTGCGCCCACTCCTATCCCTaGTCTAGCTGCCTCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: EVELRAWQVAHSYPWSSCAHSYP*SSCLRT Trigger: AGTTCTGAGGCAGCTAGACCAGGGATAGGAGTGGGC...GCAGCTAGACCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR TCA 90 bp | CCTGGAACTAACAAGTCACTCCCTTCCAGATTAGATGAGGCCAGCTGGCCTTTGCCCTTCCAGATTAGATaGGGCCAGCTGGCCTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: PGTNKSLPSRLDEASWPLPFQIR*GQLAFG Trigger: TCCAAAGGCCAGCTGGCCTCATCTAATCTGGAAGGG...CAAAGGCCAGCTGGCCTCATCTAATCTGGAAGGGAGTGACTTGTTAGTTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR GCA 90 bp | TCCCCAGTTCCAGCCCCTGAGCATAGAGGGTTTAGGGTTAGGAGGAGTACCACACTCTGTAACTCCACATaGCAGGTCATCTGCACTGGA | + |
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Preference number: 4 (lower is better) Translates to: SPVPAPEHRGFRVRRSTTLCNST*QVICTG Trigger: TCCAGTGCAGATGACCTGGCATGTGGAGTTACAGAG...TGTGGTACTCCTCCTAACCCTAAACCCTCTATGCTCAGGGGCTGGAACTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR GCA 90 bp | TCCCCAGTTCCAGCCCCTGAGCATAGAGGGTTTAGGGTTAGGAGGAGTACCACACAATGGGTGAGTTCTTaGACTCCAGCAGGAACTTTC | + |
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Preference number: 4 (lower is better) Translates to: SPVPAPEHRGFRVRRSTTQWVSS*TPAGTF Trigger: GAAAGTTCCTGCTGGAGTGCAAGAACTCACCCATTG...TGTGGTACTCCTCCTAACCCTAAACCCTCTATGCTCAGGGGCTGGAACTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR GCA 90 bp | ATTCCCCAGTTCCAGCCCCTGAGCATAGAGGGTTTAGGGTTAGGAGGAGTACCATATCCCTGGTCTAGCTaGCTCAGAACTAAAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: IPQFQPLSIEGLGLGGVPYPWSS*LRTKGG Trigger: GCCTCCTTTAGTTCTGAGGCAGCTAGACCAGGGATA...TGGTACTCCTCCTAACCCTAAACCCTCTATGCTCAGGGGCTGGAACTGGGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR GCA 90 bp | CCACAGACTGAAGAGGAAGTAGAGTTAAGGGCTTGGCAAGTTGCCCACTCCTATAAGGGCTTGGCAAGTTaGCCACTCCTATCCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: PQTEEEVELRAWQVAHSYKGLAS*PLLSLV Trigger: GACCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTT...ATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACTTCCTCTTCAGTCTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR CCA 90 bp | CCAGTTCCAGCCCCTGAGCATAGAGGGTTTAGGGTTAGGAGGAGTACCACAGACGTAGAGTTAAGGGCTTaGCAAGTTGCCCACTCCTAT | + |
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Preference number: 4 (lower is better) Translates to: PVPAPEHRGFRVRRSTTDVELRA*QVAHSY Trigger: ATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTAC...GTCTGTGGTACTCCTCCTAACCCTAAACCCTCTATGCTCAGGGGCTGGAACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR TCA 90 bp | TCCCCAGTTCCAGCCCCTGAGCATAGAGGGTTTAGGGTTAGGAGGAGTACCACAAGGAGTACCACAGACTaGAGAGGAAGTAGAGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: SPVPAPEHRGFRVRRSTTRSTTD*RGSRVK Trigger: CTTAACTCTACTTCCTCTTCAGTCTGTGGTACTCCT...TGTGGTACTCCTCCTAACCCTAAACCCTCTATGCTCAGGGGCTGGAACTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR GCA 90 bp | CCAGTTCCAGCCCCTGAGCATAGAGGGTTTAGGGTTAGGAGGAGTACCACAGACGTCCATTTCAAATTGTaGGTCATCGGGTATCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PVPAPEHRGFRVRRSTTDVHFKL*VIGYLF Trigger: GAAGAGATACCCGATGACGCACAATTTGAAATGGAC...GTCTGTGGTACTCCTCCTAACCCTAAACCCTCTATGCTCAGGGGCTGGAACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS TCA 90 bp | GGGCAGCTGGTCCCGGCCCCCGGGAATCGGGCAGCTAGTGGACGTTaGCATAGCGAGCGGGAGGAGCAGCAAAGTAACCGCCTGGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: GQLVPAPGNRAASGR*HSEREEQQSNRLAL Trigger: CAACGCCAGGCGGTTACTTTGCTGCTCCTCCCGCTCGCTATGTCAACGTCCACTAGCTGCCCGATTCCCGGGGGCCGGGACCAGCTGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR CAA 90 bp | TCCCCAGTTCCAGCCCCTGAGCATAGAGGGTTTAGGGTTAGGAGGAGTACCACAAGTAACCGCCTGGCGTaGAGGTCGAGGAGCGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SPVPAPEHRGFRVRRSTTSNRLA*RSRSAA Trigger: AGCTGCGCTCCTCGACCTCAACGCCAGGCGGTTACT...TGTGGTACTCCTCCTAACCCTAAACCCTCTATGCTCAGGGGCTGGAACTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR CAA 90 bp | GGTGGCAGCAGTGGCATGAGGGATCCCTCTGTAACTCCACATGCCAGGTCATCTGATGTCCATTTCAAATaGTGCGTCATCGGGTATCTC | + |
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Preference number: 5 (lower is better) Translates to: GGSSGMRDPSVTPHARSSDVHFK*CVIGYL Trigger: GAGATACCCGATGACGCACAATTTGAAATGGACATC...AGATGACCTGGCATGTGGAGTTACAGAGGGATCCCTCATGCCACTGCTGCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS-3UTR CAA 90 bp | GAAGTAGAGTTAAGGGCTTGGCAAGTTGCCCACTCCTATCCCTGGTCTAGCTGCAGTAGAGTTAAGGGCTaGGCAAGTTGCCCACTCCTA | + |
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Preference number: 5 (lower is better) Translates to: EVELRAWQVAHSYPWSSCSRVKG*ASCPLL Trigger: TAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACT...GCAGCTAGACCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS GCA 90 bp | AGGTGGTGGCAGCAGTGGCATGAGGGATCCCTCTGTAACTCCACATaGCAGGTCATCTGCACTGGATTAGATGTCCATTTCAAATTGTGC | + |
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Preference number: 5 (lower is better) Translates to: RWWQQWHEGSLCNST*QVICTGLDVHFKLC Trigger: GCACAATTTGAAATGGACATCTAATCCAGTGCAGATGACCTGGCATGTGGAGTTACAGAGGGATCCCTCATGCCACTGCTGCCACCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS GCA 90 bp | CAGTGGCATGAGGGATCCCTCTGTAACTCCACATGCCAGGTCATCTaGACTGGATTAGATGTCCATTTCAAATTGTGCGTCATCGGGTAT | + |
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Preference number: 5 (lower is better) Translates to: QWHEGSLCNSTCQVI*TGLDVHFKLCVIGY Trigger: ATACCCGATGACGCACAATTTGAAATGGACATCTAATCCAGTGCAGATGACCTGGCATGTGGAGTTACAGAGGGATCCCTCATGCCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS TCA 72 bp | GTCCCGGCCCCCGGGAATCGGGCAGCTAGTGGACGTTaGCATAGCGAGCGGGAGGAGCAGCAAAGTAACCGC | + |
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Preference number: 6 (lower is better) Translates to: VPAPGNRAASGR*HSEREEQQSNR Trigger: GCGGTTACTTTGCTGCTCCTCCCGCTCGCTATGTCAACGTCCACTAGCTGCCCGATTCCCGGGGGCCGGGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS CAA 72 bp | AGCGAGCGGGAGGAGCAGCAAAGTAACCGCCTGGCGTaGAGGTCGAGGAGCGCAGCTCTGAGTCTGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SEREEQQSNRLA*RSRSAALSLRR Trigger: CCGCCTCAGACTCAGAGCTGCGCTCCTCGACCTCAACGCCAGGCGGTTACTTTGCTGCTCCTCCCGCTCGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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| CDS GCA 72 bp | GAGGGATCCCTCTGTAACTCCACATGCCAGGTCATCTaGACTGGATTAGATGTCCATTTCAAATTGTGCGTC | + |
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Preference number: 6 (lower is better) Translates to: EGSLCNSTCQVI*TGLDVHFKLCV Trigger: GACGCACAATTTGAAATGGACATCTAATCCAGTGCAGATGACCTGGCATGTGGAGTTACAGAGGGATCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310331.3 |
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