RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF4E2 (Homo sapiens)

Ensembl gene IDs: ENSG00000135930

Ensembl transcript IDs: ENST00000409098.5, ENST00000409167.7, ENST00000409495.5, ENST00000409514.5, ENST00000444113.1, ENST00000454501.1, ENST00000459714.1, ENST00000479834.1

Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCAGCGATGCTGGAGGGTGTCTAGCGGAATCCGTCCTCCAGGAATaGGTGCAAAAGGAGAGCGCACGGCTCAGGGACGTCCCTTCAGTG +
Preference number: 1 (lower is better)
Translates to: VSDAGGCLAESVLQE*VQKESARLRDVPSV
Trigger: CACTGAAGGGACGTCCCTGAGCCGTGCGCTCTCCTTTTGCACTCATTCCTGGAGGACGGATTCCGCTAGACACCCTCCAGCATCGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR TCA 90 bp AATGAGTGCAAAAGGAGAGCGCACGGCTCAGGGACGTCCCTTCAGTaGGCAATGGAAGGACTGGCTGGAGGCCTCCCATCCATTTCGGAC +
Preference number: 1 (lower is better)
Translates to: NECKRRAHGSGTSLQ*AMEGLAGGLPSISD
Trigger: GTCCGAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCCTGAGCCGTGCGCTCTCCTTTTGCACTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CCA 90 bp GAGCGCACGGCTCAGGGACGTCCCTTCAGTGAGCAATGGAAGGACTaGCTGGAGGCCTCCCATCCATTTCGGACAAACACACACATACAG +
Preference number: 1 (lower is better)
Translates to: ERTAQGRPFSEQWKD*LEASHPFRTNTHIQ
Trigger: CTGTATGTGTGTGTTTGTCCGAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCCTGAGCCGTGCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CCA 90 bp GCAAAAGGAGAGCGCACGGCTCAGGGACGTCCCTTCAGTGAGCAATaGAAGGACTGGCTGGAGGCCTCCCATCCATTTCGGACAAACACA +
Preference number: 1 (lower is better)
Translates to: AKGERTAQGRPFSEQ*KDWLEASHPFRTNT
Trigger: TGTGTTTGTCCGAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCCTGAGCCGTGCGCTCTCCTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CCA 90 bp GACAAAGAACTGCAGCAAGTAGCCAGAAGCCCTAGAGGGAAGGCCTaGTCTGTCCCTTCTCCACAAGTAAGTCTCCTGTCCGGCCATATT +
Preference number: 1 (lower is better)
Translates to: DKELQQVARSPRGKA*SVPSPQVSLLSGHI
Trigger: AATATGGCCGGACAGGAGACTTACTTGTGGAGAAGGGACAGACCAGGCCTTCCCTCTAGGGCTTCTGGCTACTTGCTGCAGTTCTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
3UTR CCA 90 bp GGATGCACAGACATTCATAATACTGGTAACTCTCATCAACAGCTCTaGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAG +
Preference number: 1 (lower is better)
Translates to: GCTDIHNTGNSHQQL*HVHVATVPFVQHGK
Trigger: CTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTATTATGAATGTCTGTGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CCA 90 bp TTCATAATACTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTaGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGAC +
Preference number: 1 (lower is better)
Translates to: FIILVTLINSSGMYT*PRYPSYNTGREQQD
Trigger: GTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTATTATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CCA 90 bp AAGGCATTCCCTCTAAGCTGCCTCAGTGAAACCAGTGAGAGCCACTaGATTACAATTCTAAGTGCAGCTGTGCCTAAGAAGGAGAGAGTC +
Preference number: 1 (lower is better)
Translates to: KAFPLSCLSETSESH*ITILSAAVPKKERV
Trigger: GACTCTCTCCTTCTTAGGCACAGCTGCACTTAGAATTGTAATCCAGTGGCTCTCACTGGTTTCACTGAGGCAGCTTAGAGGGAATGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR TCA 90 bp AAGCCTAACAGTGATTCTCACTGTGGACAGAGAGCTCTATTTCCCTaGGTCCTAGGGAGATTGCCAAGCTTATTTTCCCTGTGGCCTTCA +
Preference number: 1 (lower is better)
Translates to: KPNSDSHCGQRALFP*VLGRLPSLFSLWPS
Trigger: TGAAGGCCACAGGGAAAATAAGCTTGGCAATCTCCCTAGGACTCAGGGAAATAGAGCTCTCTGTCCACAGTGAGAATCACTGTTAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409167.7
3UTR TCA 90 bp ACACTTTTTCACAATAGCCTGAGCTTACTTCTGACACTCAATCACTaGGGAGCAAGCCTAACAGTGATTCTCACTGTGGACAGAGAGCTC +
Preference number: 1 (lower is better)
Translates to: TLFHNSLSLLLTLNH*GASLTVILTVDREL
Trigger: GAGCTCTCTGTCCACAGTGAGAATCACTGTTAGGCTTGCTCCTCAGTGATTGAGTGTCAGAAGTAAGCTCAGGCTATTGTGAAAAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409167.7
3UTR CCA 90 bp TCATTTTTAAAGCATGCCTGCAGCAGTCTTCAAGAGGTTTCTGCCTaGGCATCACAATCAGCACACATTTGCTCATACACATACCAGGTG +
Preference number: 1 (lower is better)
Translates to: SFLKHACSSLQEVSA*ASQSAHICSYTYQV
Trigger: CACCTGGTATGTGTATGAGCAAATGTGTGCTGATTGTGATGCCCAGGCAGAAACCTCTTGAAGACTGCTGCAGGCATGCTTTAAAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR GCA 90 bp CTAGATTCTGCTCCAGTTCAGTTTACTAAGGCATTCCCTCTAAGCTaGCTCAGTGAAACCAGTGAGAGCCACTGGATTACAATTCTAAGT +
Preference number: 1 (lower is better)
Translates to: LDSAPVQFTKAFPLS*LSETSESHWITILS
Trigger: ACTTAGAATTGTAATCCAGTGGCTCTCACTGGTTTCACTGAGGCAGCTTAGAGGGAATGCCTTAGTAAACTGAACTGGAGCAGAATCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CCA 90 bp GCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCCCCTTCAGTGAGCAATaGAAGGACTGGCTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: ATVPFVQHGKRTTGRPRGPFSEQ*KDWLEA
Trigger: GGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGG...GCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CCA 90 bp CTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCGAGCAATGGAAGGACTaGCTGGAGGCCTCCCATCCA +
Preference number: 2 (lower is better)
Translates to: LRTTREENNRTPKRHLDSEQWKD*LEASHP
Trigger: TGGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTC...GCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CCA 90 bp GTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGCCCTTCAGTGAGCAATaGAAGGACTGGCTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: VPFVQHGKRTTGRPRGIWPFSEQ*KDWLEA
Trigger: GGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGG...CCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CCA 90 bp TCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACAATGGAAGGACTGGCTaGAGGCCTCCCATCCATTTC +
Preference number: 2 (lower is better)
Translates to: SYNTGREQQDAQEASGQHNGRTG*RPPIHF
Trigger: GAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATT...GTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CCA 90 bp CTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCAATGGAAGGACTGGCTaGAGGCCTCCCATCCATTTC +
Preference number: 2 (lower is better)
Translates to: LRTTREENNRTPKRHLDSNGRTG*RPPIHF
Trigger: GAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATT...GCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR TCA 90 bp AGAGTCCTAACTCTTAGCTGGCTAGCTCTCCCTCCAGCTTTGAGACAATCTGACGGCAGGGAGCCTCGCTaGCAAAGAACTGCAGCAAGT +
Preference number: 2 (lower is better)
Translates to: RVLTLSWLALPPALRQSDGREPR*QRTAAS
Trigger: ACTTGCTGCAGTTCTTTGTCAGCGAGGCTCCCTGCC...GTCAGATTGTCTCAAAGCTGGAGGGAGAGCTAGCCAGCTAAGAGTTAGGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
3UTR-3UTR CCA 90 bp GCAAGCCCAGGTAGTACAACTGGGTTTCTGCAGATGGGCTCTCTCTGCTACAAACCTAGAGGGAAGGCCTaGTCTGTCCCTTCTCCACAA +
Preference number: 2 (lower is better)
Translates to: ASPGSTTGFLQMGSLCYKPRGKA*SVPSPQ
Trigger: TTGTGGAGAAGGGACAGACCAGGCCTTCCCTCTAGG...TTTGTAGCAGAGAGAGCCCATCTGCAGAAACCCAGTTGTACTACCTGGGCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
3UTR-3UTR TCA 90 bp CCTGTAGAAATTAAGCAAGCCCAGGTAGTACAACTGGGTTTCTGCAGATGGGCTGGCAGGGAGCCTCGCTaGCAAAGAACTGCAGCAAGT +
Preference number: 2 (lower is better)
Translates to: PVEIKQAQVVQLGFCRWAGREPR*QRTAAS
Trigger: ACTTGCTGCAGTTCTTTGTCAGCGAGGCTCCCTGCC...AGCCCATCTGCAGAAACCCAGTTGTACTACCTGGGCTTGCTTAATTTCTACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
3UTR-3UTR GCA 90 bp TGCCTAACAGGCATAACCCCTTGCTCTAACCAGCCTAGGGCCAGTATGTTTTTGTCCTCCAGGAATGAGTaGAAAAGGAGAGCGCACGGC +
Preference number: 2 (lower is better)
Translates to: CLTGITPCSNQPRASMFLSSRNE*KRRAHG
Trigger: GCCGTGCGCTCTCCTTTTGCACTCATTCCTGGAGGA...CAAAAACATACTGGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGTTAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CCA 90 bp GGTAGTACAACTGGGTTTCTGCAGATGGGCTCTCTCTGCTACAAAGCACCTGGTCCGGCCATATTCCTCTaGGCCCAACTACAGATCTAC +
Preference number: 2 (lower is better)
Translates to: GSTTGFLQMGSLCYKAPGPAIFL*AQLQIY
Trigger: GTAGATCTGTAGTTGGGCCCAGAGGAATATGGCCGG...ACCAGGTGCTTTGTAGCAGAGAGAGCCCATCTGCAGAAACCCAGTTGTACTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
3UTR-3UTR TCA 90 bp CTTCACTCTCCTCACATTCTGGTTACGTTGGCCCTGGTAGACCTTTATCCCTTTTCCGTCCTCCAGGAATaGGTGCAAAAGGAGAGCGCA +
Preference number: 2 (lower is better)
Translates to: LHSPHILVTLALVDLYPFSVLQE*VQKESA
Trigger: TGCGCTCTCCTTTTGCACTCATTCCTGGAGGACGGA...AAAGGGATAAAGGTCTACCAGGGCCAACGTAACCAGAATGTGAGGAGAGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR GCA 90 bp GCAAATAAAGCCATCCAGCAAGGTCACCTTTTCCTCAGATGCCCCAGTTTCAGGCTTGCACACAGGCTCTaGTCATATGGGAAACAGGCC +
Preference number: 2 (lower is better)
Translates to: ANKAIQQGHLFLRCPSFRLAHRL*SYGKQA
Trigger: GGCCTGTTTCCCATATGAGCAGAGCCTGTGTGCAAG...CCTGAAACTGGGGCATCTGAGGAAAAGGTGACCTTGCTGGATGGCTTTATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR TCA 90 bp CATAAGGCAGGGGATGATACAAAATCCTGGACAGTCATCACATCAGTAACACAGGGGACGTCCCTTCAGTaGGCAATGGAAGGACTGGCT +
Preference number: 2 (lower is better)
Translates to: HKAGDDTKSWTVITSVTQGTSLQ*AMEGLA
Trigger: AGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCC...CTGTGTTACTGATGTGATGACTGTCCAGGATTTTGTATCATCCCCTGCCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR TCA 90 bp TACGTTGGCCCTGGTAGACCTTTATCCCTTTGCCTCTGTAACGGTGATACCATAGCTTCCCTTCCTCAATaGGGGACATGCCAGAAACAG +
Preference number: 2 (lower is better)
Translates to: YVGPGRPLSLCLCNGDTIASLPQ*GTCQKQ
Trigger: CTGTTTCTGGCATGTCCCTCATTGAGGAAGGGAAGC...TATGGTATCACCGTTACAGAGGCAAAGGGATAAAGGTCTACCAGGGCCAACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CCA 90 bp GTAGAAATTAAGCAAGCCCAGGTAGTACAACTGGGTTTCTGCAGATGGGCTCTCCCGGCCATATTCCTCTaGGCCCAACTACAGATCTAC +
Preference number: 2 (lower is better)
Translates to: VEIKQAQVVQLGFCRWALPAIFL*AQLQIY
Trigger: GTAGATCTGTAGTTGGGCCCAGAGGAATATGGCCGG...GAGAGCCCATCTGCAGAAACCCAGTTGTACTACCTGGGCTTGCTTAATTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
3UTR CAA 90 bp AACCTAAGAGTCCTAACTCTTAGCTGGCTAGCTCTCCCTCCAGCTTaGAGACAATCTGACAGCCACTCCCCACACTTTTTCACAATAGCC +
Preference number: 2 (lower is better)
Translates to: NLRVLTLSWLALPPA*RQSDSHSPHFFTIA
Trigger: GGCTATTGTGAAAAAGTGTGGGGAGTGGCTGTCAGATTGTCTCAAAGCTGGAGGGAGAGCTAGCCAGCTAAGAGTTAGGACTCTTAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409167.7
3UTR-3UTR GCA 90 bp TATTGCCACTGCCAGTATCATAGGGAACACACACACACACACACACACACACGACAACAGTCAGGTAGATaGCCAAAGGAGGGCAAATCC +
Preference number: 2 (lower is better)
Translates to: YCHCQYHREHTHTHTHTRQQSGR*PKEGKS
Trigger: GGATTTGCCCTCCTTTGGGCATCTACCTGACTGTTG...TCGTGTGTGTGTGTGTGTGTGTGTGTGTTCCCTATGATACTGGCAGTGGCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CCA 90 bp CTTCACTCTCCTCACATTCTGGTTACGTTGGCCCTGGTAGACCTTTATCCCTTTCAAGAGGTTTCTGCCTaGGCATCACAATCAGCACAC +
Preference number: 2 (lower is better)
Translates to: LHSPHILVTLALVDLYPFQEVSA*ASQSAH
Trigger: GTGTGCTGATTGTGATGCCCAGGCAGAAACCTCTTG...AAAGGGATAAAGGTCTACCAGGGCCAACGTAACCAGAATGTGAGGAGAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR GCA 90 bp ACTTCTGACACTCAATCACTGAGGAGCAAGCCTAACAGTGATTCTCACTGTGGACAGATGGGCTCTCTCTaGTACAAAGCACCTGGTAGT +
Preference number: 2 (lower is better)
Translates to: TSDTQSLRSKPNSDSHCGQMGSL*YKAPGS
Trigger: ACTACCAGGTGCTTTGTAGCAGAGAGAGCCCATCTG...TCCACAGTGAGAATCACTGTTAGGCTTGCTCCTCAGTGATTGAGTGTCAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
3UTR-3UTR GCA 90 bp TCTCCAGTGGCAACCTCACATTCTGGTACTGTGCAAAGCGGAGACCGACTCTTCTATTTGAATCCTAGGTaGTCTTGTGACTTCTCTGAC +
Preference number: 2 (lower is better)
Translates to: SPVATSHSGTVQSGDRLFYLNPR*SCDFSD
Trigger: GTCAGAGAAGTCACAAGAGCACCTAGGATTCAAATA...GAAGAGTCGGTCTCCGCTTTGCACAGTACCAGAATGTGAGGTTGCCACTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR GCA 90 bp GGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGAACAGAAAAGGATTATTaGCAGCTTGTGTACTCTCAC +
Preference number: 2 (lower is better)
Translates to: GREQQDAQEASGQHTANRTEKDY*QLVYSH
Trigger: GTGAGAGTACACAAGCTGGCAATAATCCTTTTCTGT...TCTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409514.5
3UTR-3UTR CCA 90 bp AGGGAGATTGCCAAGCTTATTTTCCCTGTGGCCTTCATGCTTCCCTTTGATTCTCTGGGTTTCTGCAGATaGGCTCTCTCTGCTACAAAG +
Preference number: 2 (lower is better)
Translates to: REIAKLIFPVAFMLPFDSLGFCR*ALSATK
Trigger: CTTTGTAGCAGAGAGAGCCCATCTGCAGAAACCCAG...AGAATCAAAGGGAAGCATGAAGGCCACAGGGAAAATAAGCTTGGCAATCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409167.7
3UTR-3UTR TCA 90 bp TCTCCAGTGGCAACCTCACATTCTGGTACTGTGCAAAGCGGAGACCGACTCTTCCTAGATCTTCTTATCTaGTCTAACTTGCCCTGTAAT +
Preference number: 2 (lower is better)
Translates to: SPVATSHSGTVQSGDRLFLDLLI*SNLPCN
Trigger: ATTACAGGGCAAGTTAGATCAGATAAGAAGATCTAG...GAAGAGTCGGTCTCCGCTTTGCACAGTACCAGAATGTGAGGTTGCCACTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR GCA 90 bp TATTGCCACTGCCAGTATCATAGGGAACACACACACACACACACACACACACGAGCAATAACCAGCTTTTaGTTCCCTTCCTCAATGAGG +
Preference number: 2 (lower is better)
Translates to: YCHCQYHREHTHTHTHTRAITSF*FPSSMR
Trigger: CCTCATTGAGGAAGGGAAGCAAAAGCTGGTTATTGC...TCGTGTGTGTGTGTGTGTGTGTGTGTGTTCCCTATGATACTGGCAGTGGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CCA 90 bp GAGCTTACTTCTGACACTCAATCACTGAGGAGCAAGCCTAACAGTGATTCTCACAGCTTATTTTCCCTGTaGCCTTCATGCTTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: ELTSDTQSLRSKPNSDSHSLFSL*PSCFPL
Trigger: CAAAGGGAAGCATGAAGGCCACAGGGAAAATAAGCT...GTGAGAATCACTGTTAGGCTTGCTCCTCAGTGATTGAGTGTCAGAAGTAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409167.7
3UTR-3UTR CCA 90 bp CCTTTTCCTCAGATGCCCCAGTTTCAGGATGATAGAATTTGCATATTAAGTGTTCACAGCTTCAGAAAGTaGTGGGCTTGGAGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: PFPQMPQFQDDRICILSVHSFRK*WAWRRG
Trigger: TCCCCTCCTCCAAGCCCACCACTTTCTGAAGCTGTG...AACACTTAATATGCAAATTCTATCATCCTGAAACTGGGGCATCTGAGGAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR TCA 90 bp CTGTGGACAGAGAGCTCTATTTCCCTGAGTCCTAGGGAGATTGCCAAGCTTATTATAGTGGTTAGCATATaGAAGACAAGACAGCCTGTA +
Preference number: 2 (lower is better)
Translates to: LWTESSISLSPREIAKLIIVVSI*KTRQPV
Trigger: TACAGGCTGTCTTGTCTTTCATATGCTAACCACTAT...AATAAGCTTGGCAATCTCCCTAGGACTCAGGGAAATAGAGCTCTCTGTCCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
3UTR-3UTR GCA 90 bp ACTGCAGTAGATAATTGCTCTGAAAGTGCAACACTAAATCACTCTTGTCATAGCGCATTCCCTCTAAGCTaGCTCAGTGAAACCAGTGAG +
Preference number: 2 (lower is better)
Translates to: TAVDNCSESATLNHSCHSAFPLS*LSETSE
Trigger: CTCACTGGTTTCACTGAGGCAGCTTAGAGGGAATGC...GCTATGACAAGAGTGATTTAGTGTTGCACTTTCAGAGCAATTATCTACTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CAA 90 bp AGAATTTGCATATTAAGTGTTAATAGGCCTGGCAATAACCAGCTTTaGCTTCCCTTCCTCAATGAGGGACATGCCAGAAACAGACTTGCA +
Preference number: 2 (lower is better)
Translates to: RICILSVNRPGNNQL*LPFLNEGHARNRLA
Trigger: TGCAAGTCTGTTTCTGGCATGTCCCTCATTGAGGAAGGGAAGCAAAAGCTGGTTATTGCCAGGCCTATTAACACTTAATATGCAAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR GCA 90 bp ACAACAACAACAACAACAACAAAACTATGGACAACACACCTAGCCAGGAGGCCTGTCATTTTTAAAGCATaGCTGCAGCAGTCTTCAAGA +
Preference number: 2 (lower is better)
Translates to: TTTTTTTKLWTTHLARRPVIFKA*LQQSSR
Trigger: TCTTGAAGACTGCTGCAGGCATGCTTTAAAAATGAC...AGGCCTCCTGGCTAGGTGTGTTGTCCATAGTTTTGTTGTTGTTGTTGTTGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR TCA 72 bp AAAAGGAGAGCGCACGGCTCAGGGACGTCCCTTCAGTaGGCAATGGAAGGACTGGCTGGAGGCCTCCCATCC +
Preference number: 3 (lower is better)
Translates to: KRRAHGSGTSLQ*AMEGLAGGLPS
Trigger: GGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCCTGAGCCGTGCGCTCTCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR TCA 72 bp GCTGGAGGGTGTCTAGCGGAATCCGTCCTCCAGGAATaGGTGCAAAAGGAGAGCGCACGGCTCAGGGACGTC +
Preference number: 3 (lower is better)
Translates to: AGGCLAESVLQE*VQKESARLRDV
Trigger: GACGTCCCTGAGCCGTGCGCTCTCCTTTTGCACTCATTCCTGGAGGACGGATTCCGCTAGACACCCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CCA 72 bp CTGCAGCAAGTAGCCAGAAGCCCTAGAGGGAAGGCCTaGTCTGTCCCTTCTCCACAAGTAAGTCTCCTGTCC +
Preference number: 3 (lower is better)
Translates to: LQQVARSPRGKA*SVPSPQVSLLS
Trigger: GGACAGGAGACTTACTTGTGGAGAAGGGACAGACCAGGCCTTCCCTCTAGGGCTTCTGGCTACTTGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
3UTR CCA 72 bp GCTCAGGGACGTCCCTTCAGTGAGCAATGGAAGGACTaGCTGGAGGCCTCCCATCCATTTCGGACAAACACA +
Preference number: 3 (lower is better)
Translates to: AQGRPFSEQWKD*LEASHPFRTNT
Trigger: TGTGTTTGTCCGAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CCA 72 bp AGGGACGTCCCTTCAGTGAGCAATGGAAGGACTGGCTaGAGGCCTCCCATCCATTTCGGACAAACACACACA +
Preference number: 3 (lower is better)
Translates to: RDVPSVSNGRTG*RPPIHFGQTHT
Trigger: TGTGTGTGTTTGTCCGAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CAA 90 bp TGCCTAACAGGCATAACCCCTTGCTCTAACCAGCCTAGGGCCAGTATGTTTTTGAGAAGCACCTCCCTTTaGGCCCCTGTACTCCCCGTT +
Preference number: 3 (lower is better)
Translates to: CLTGITPCSNQPRASMFLRSTSL*APVLPV
Trigger: AACGGGGAGTACAGGGGCCAAAAGGGAGGTGCTTCT...CAAAAACATACTGGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGTTAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR GCA 72 bp GGTAGTACAACTGGGTTTCTGCAGATGGGCTCTCTCTaGTACAAAGCACCTGGTAGTATAGGTGGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: GSTTGFLQMGSL*YKAPGSIGGRE
Trigger: CTCCCTGCCACCTATACTACCAGGTGCTTTGTAGCAGAGAGAGCCCATCTGCAGAAACCCAGTTGTACTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
3UTR CCA 72 bp CTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTaGCCACGGTACCCTTCGTACAACACGGGAAGAGAA +
Preference number: 3 (lower is better)
Translates to: LVTLINSSGMYT*PRYPSYNTGRE
Trigger: TTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
3UTR-3UTR CAA 90 bp CTCCACTCTCCAGTGGCAACCTCACATTCTGGTACTGTGCAAAGCGGAGACCGATTGTATTTCGAAAGCTaGAATTGTCCCCTGAGTGTG +
Preference number: 3 (lower is better)
Translates to: LHSPVATSHSGTVQSGDRLYFES*NCPLSV
Trigger: CACACTCAGGGGACAATTCAAGCTTTCGAAATACAA...TCGGTCTCCGCTTTGCACAGTACCAGAATGTGAGGTTGCCACTGGAGAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409514.5
3UTR-3UTR CAA 90 bp CTCCACTCTCCAGTGGCAACCTCACATTCTGGTACTGTGCAAAGCGGAGACCGATACAGAAAAGGATTATaGCCAGCTTGTGTACTCTCA +
Preference number: 3 (lower is better)
Translates to: LHSPVATSHSGTVQSGDRYRKGL*PACVLS
Trigger: TGAGAGTACACAAGCTGGCAATAATCCTTTTCTGTA...TCGGTCTCCGCTTTGCACAGTACCAGAATGTGAGGTTGCCACTGGAGAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409514.5
3UTR GCA 72 bp GAAATTAAGCAAGCCCAGGTAGTACAACTGGGTTTCTaGAGATGGGCTCTCTCTGCTACAAAGCACCTGGTA +
Preference number: 3 (lower is better)
Translates to: EIKQAQVVQLGF*RWALSATKHLV
Trigger: TACCAGGTGCTTTGTAGCAGAGAGAGCCCATCTGCAGAAACCCAGTTGTACTACCTGGGCTTGCTTAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
3UTR GCA 72 bp GCTCCAGTTCAGTTTACTAAGGCATTCCCTCTAAGCTaGCTCAGTGAAACCAGTGAGAGCCACTGGATTACA +
Preference number: 3 (lower is better)
Translates to: APVQFTKAFPLS*LSETSESHWIT
Trigger: TGTAATCCAGTGGCTCTCACTGGTTTCACTGAGGCAGCTTAGAGGGAATGCCTTAGTAAACTGAACTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CCA 72 bp AAGCATGCCTGCAGCAGTCTTCAAGAGGTTTCTGCCTaGGCATCACAATCAGCACACATTTGCTCATACACA +
Preference number: 3 (lower is better)
Translates to: KHACSSLQEVSA*ASQSAHICSYT
Trigger: TGTGTATGAGCAAATGTGTGCTGATTGTGATGCCCAGGCAGAAACCTCTTGAAGACTGCTGCAGGCATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CAA 90 bp CTTCACTCTCCTCACATTCTGGTTACGTTGGCCCTGGTAGACCTTTATCCCTTTGGCAATAACCAGCTTTaGCTTCCCTTCCTCAATGAG +
Preference number: 3 (lower is better)
Translates to: LHSPHILVTLALVDLYPFGNNQL*LPFLNE
Trigger: CTCATTGAGGAAGGGAAGCAAAAGCTGGTTATTGCC...AAAGGGATAAAGGTCTACCAGGGCCAACGTAACCAGAATGTGAGGAGAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR TCA 72 bp AGTGATTCTCACTGTGGACAGAGAGCTCTATTTCCCTaGGTCCTAGGGAGATTGCCAAGCTTATTTTCCCTG +
Preference number: 3 (lower is better)
Translates to: SDSHCGQRALFP*VLGRLPSLFSL
Trigger: CAGGGAAAATAAGCTTGGCAATCTCCCTAGGACTCAGGGAAATAGAGCTCTCTGTCCACAGTGAGAATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409167.7
3UTR TCA 72 bp CACAATAGCCTGAGCTTACTTCTGACACTCAATCACTaGGGAGCAAGCCTAACAGTGATTCTCACTGTGGAC +
Preference number: 3 (lower is better)
Translates to: HNSLSLLLTLNH*GASLTVILTVD
Trigger: GTCCACAGTGAGAATCACTGTTAGGCTTGCTCCTCAGTGATTGAGTGTCAGAAGTAAGCTCAGGCTATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
3UTR CCA 72 bp GACATTCATAATACTGGTAACTCTCATCAACAGCTCTaGCATGTACACGTGGCCACGGTACCCTTCGTACAA +
Preference number: 3 (lower is better)
Translates to: DIHNTGNSHQQL*HVHVATVPFVQ
Trigger: TTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTATTATGAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CCA 72 bp ACCGGAGGGCATAAGGCAGGGGATGATACAAAATCCTaGACAGTCATCACATCAGTAACACAGCTTCAGAAA +
Preference number: 3 (lower is better)
Translates to: TGGHKAGDDTKS*TVITSVTQLQK
Trigger: TTTCTGAAGCTGTGTTACTGATGTGATGACTGTCCAGGATTTTGTATCATCCCCTGCCTTATGCCCTCCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CAA 90 bp TGCCTAACAGGCATAACCCCTTGCTCTAACCAGCCTAGGGCCAGTATGTTTTTGTCTGACGCTATTTATTaGAATCCTAGGTGCTCTTGT +
Preference number: 3 (lower is better)
Translates to: CLTGITPCSNQPRASMFLSDAIY*NPRCSC
Trigger: ACAAGAGCACCTAGGATTCAAATAAATAGCGTCAGA...CAAAAACATACTGGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGTTAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CCA 72 bp ATGAGAGAACTAAACCTAAGAGTCCTAACTCTTAGCTaGCTAGCTCTCCCTCCAGCTTTGAGACAATCTGAC +
Preference number: 3 (lower is better)
Translates to: MRELNLRVLTLS*LALPPALRQSD
Trigger: GTCAGATTGTCTCAAAGCTGGAGGGAGAGCTAGCCAGCTAAGAGTTAGGACTCTTAGGTTTAGTTCTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
3UTR-3UTR CAA 90 bp CATAAGGCAGGGGATGATACAAAATCCTGGACAGTCATCACATCAGTAACACAGGCATTTACAGCTATTTaGGGACTCTCCAACAGAACA +
Preference number: 3 (lower is better)
Translates to: HKAGDDTKSWTVITSVTQAFTAI*GLSNRT
Trigger: TGTTCTGTTGGAGAGTCCCAAAATAGCTGTAAATGC...CTGTGTTACTGATGTGATGACTGTCCAGGATTTTGTATCATCCCCTGCCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR-3UTR CAA 90 bp ACAACAACAACAACAACAACAAAACTATGGACAACACACCTAGCCAGGAGGCCTACAATCAGCACACATTaGCTCATACACATACCAGGT +
Preference number: 3 (lower is better)
Translates to: TTTTTTTKLWTTHLARRPTISTH*LIHIPG
Trigger: ACCTGGTATGTGTATGAGCAAATGTGTGCTGATTGT...AGGCCTCCTGGCTAGGTGTGTTGTCCATAGTTTTGTTGTTGTTGTTGTTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CCA 72 bp AGTTGCAAAGACACTTGTCAAAGGCACATATTGGTATaGGGCCATATGAGAGAACTAAACCTAAGAGTCCTA +
Preference number: 3 (lower is better)
Translates to: SCKDTCQRHILV*GHMRELNLRVL
Trigger: TAGGACTCTTAGGTTTAGTTCTCTCATATGGCCCCATACCAATATGTGCCTTTGACAAGTGTCTTTGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
3UTR-3UTR CAA 90 bp ACTGCAGTAGATAATTGCTCTGAAAGTGCAACACTAAATCACTCTTGTCATAGCAGGGCCAGTATGTTTTaGATGGAAAAGACAACTGTC +
Preference number: 3 (lower is better)
Translates to: TAVDNCSESATLNHSCHSRASMF*MEKTTV
Trigger: GACAGTTGTCTTTTCCATCAAAAACATACTGGCCCT...GCTATGACAAGAGTGATTTAGTGTTGCACTTTCAGAGCAATTATCTACTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp CAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCCTGTTCATAGCTCTGTaGGCTCGTGGGACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QHGKRTTGRPRGIWTAHSLFIAL*ARGTAG
Trigger: CCCGGCCGTCCCACGAGCTCACAGAGCTATGAACAG...GCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp TCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACCTGTTCACCAGGCCATaGAACTCCTCCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SYNTGREQQDAQEASGQHLFTRP*NSSQAL
Trigger: CAGGGCCTGGGAGGAGTTTCATGGCCTGGTGAACAG...GTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444113.1
CDS-3UTR GCA 90 bp ACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACCCGATCAGCGGCCGCTaGTGTTCACCAGGCCATGAA +
Preference number: 4 (lower is better)
Translates to: TGREQQDAQEASGQHTANPISGR*CSPGHE
Trigger: TTCATGGCCTGGTGAACAGCAGCGGCCGCTGATCGG...GTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409514.5
ENST00000444113.1
CDS-3UTR TCA 90 bp ATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAGGGACGTCCCTTCAGTaGGCAATGGAAGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: INSSGMYTWPRYPSYNTGGTSLQ*AMEGLA
Trigger: AGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCC...TCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR TCA 90 bp CTCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGGACGTCCCTTCAGTaGGCAATGGAAGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: LINSSGMYTWPRYPSYNTGTSLQ*AMEGLA
Trigger: AGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCC...CGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR TCA 90 bp TCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACGGGACGTCCCTTCAGTaGGCAATGGAAGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: SYNTGREQQDAQEASGQHGTSLQ*AMEGLA
Trigger: AGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCC...GTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR GCA 90 bp TGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGTCCTCCAGGAATGAGTaGAAAAGGAGAGCGCACGGC +
Preference number: 4 (lower is better)
Translates to: WPRYPSYNTGREQQDAQESSRNE*KRRAHG
Trigger: GCCGTGCGCTCTCCTTTTGCACTCATTCCTGGAGGA...CTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp GGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGCCCTTCAGTGAGCAATaGAAGGACTGGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GKRTTGRPRGIWTAHSKQPFSEQ*KDWLEA
Trigger: GGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGG...CTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp ACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACCCCTTCAGTGAGCAATaGAAGGACTGGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TGREQQDAQEASGQHTANPFSEQ*KDWLEA
Trigger: GGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGG...GTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp CTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCCCCTTCAGTGAGCAATaGAAGGACTGGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LRTTREENNRTPKRHLDSPFSEQ*KDWLEA
Trigger: GGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGG...GCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp GGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGTCTCATCAACAGCTCTaGCATGTACACGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: GHGTLRTTREENNRTPKRSHQQL*HVHVAT
Trigger: CGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGA...CCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp GTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGGCAGCGAGGTCCCACTaGACTTTCCTTTCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: VPFVQHGKRTTGRPRGIWAARSH*TFLSEE
Trigger: CTCCTCGGAAAGGAAAGTCCAGTGGGACCTCGCTGC...CCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444113.1
CDS-3UTR TCA 90 bp ACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACACTCCTCCCAGGCCTTaGTGCTGTCGGTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: TGREQQDAQEASGQHTANTPPRP*CCRCEF
Trigger: AAACTCACACCGACAGCATCAAGGCCTGGGAGGAGT...GTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409514.5
CDS-3UTR TCA 90 bp ATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGATCCGTCCTCCAGGAATaGGTGCAAAAGGAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: INSSGMYTWPRYPSYNTGSVLQE*VQKESA
Trigger: TGCGCTCTCCTTTTGCACTCATTCCTGGAGGACGGA...TCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR GCA 90 bp CTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCTCCTCCAGGAATGAGTaGAAAAGGAGAGCGCACGGC +
Preference number: 4 (lower is better)
Translates to: LRTTREENNRTPKRHLDSSSRNE*KRRAHG
Trigger: GCCGTGCGCTCTCCTTTTGCACTCATTCCTGGAGGA...GCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR GCA 90 bp ACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCACAGGCATAACCCCTTaGTCTAACCAGCCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: TVPFVQHGKRTTGRPRGITGITP*SNQPRA
Trigger: GGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGT...GATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp GCGGAGACCGACTCTTCACTCTCCTCACATTCTGGTTACGTTGGCCCTGGTAGACGCCCAAGAGGCATCTaGACAGCACACAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: AETDSSLSSHSGYVGPGRRPRGI*TAHSKQ
Trigger: CTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCG...TCTACCAGGGCCAACGTAACCAGAATGTGAGGAGAGTGAAGAGTCGGTCTCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp CTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACCGCCCAAGAGGCATCTaGACAGCACACAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: LACTRGHGTLRTTREENNRPRGI*TAHSKQ
Trigger: CTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCG...GTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp ACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACTCTGGCATGTACACGTaGCCACGGTACCCTTCGTAC +
Preference number: 4 (lower is better)
Translates to: TGREQQDAQEASGQHTANSGMYT*PRYPSY
Trigger: GTACGAAGGGTACCGTGGCCACGTGTACATGCCAGA...GTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp CTCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGTCTGGCATGTACACGTaGCCACGGTACCCTTCGTAC +
Preference number: 4 (lower is better)
Translates to: LINSSGMYTWPRYPSYNTSGMYT*PRYPSY
Trigger: GTACGAAGGGTACCGTGGCCACGTGTACATGCCAGA...CGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp CAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGTCTCATCAACAGCTCTaGCATGTACACGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: QQLWHVHVATVPFVQHGKSHQQL*HVHVAT
Trigger: CGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGA...CTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp TCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGAGCTTCAGAAAGTGGTaGGCTTGGAGGAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SSTALACTRGHGTLRTTRSFRKW*AWRRGE
Trigger: CTCTCCCCTCCTCCAAGCCCACCACTTTCTGAAGCT...CCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp TCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAACACAGCTTCAGAAAGTaGTGGGCTTGGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: STALACTRGHGTLRTTREHSFRK*WAWRRG
Trigger: TCCCCTCCTCCAAGCCCACCACTTTCTGAAGCTGTG...TTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp TCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAATCCGTCCTCCAGGAATaGGTGCAAAAGGAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: SGMYTWPRYPSYNTGREQSVLQE*VQKESA
Trigger: TGCGCTCTCCTTTTGCACTCATTCCTGGAGGACGGA...TTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR TCA 90 bp GAAGGCCTGGTCTGTCCCTTCTCCACAAGTAAGTCTCCTGTCCGGCCATATTCCCCCCCAACACGTACTTaGTGCTGTCGGTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: EGLVCPFSTSKSPVRPYSPPTRT*CCRCEF
Trigger: AAACTCACACCGACAGCATCAAGTACGTGTTGGGGG...GGAATATGGCCGGACAGGAGACTTACTTGTGGAGAAGGGACAGACCAGGCCTTC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR TCA 90 bp CTGAGTCCTAGGGAGATTGCCAAGCTTATTTTCCCTGTGGCCTTCATGCTTCCCGGCAGGGAGCCTCGCTaGCAAAGAACTGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LSPREIAKLIFPVAFMLPGREPR*QRTAAS
Trigger: ACTTGCTGCAGTTCTTTGTCAGCGAGGCTCCCTGCC...GGGAAGCATGAAGGCCACAGGGAAAATAAGCTTGGCAATCTCCCTAGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR GCA 90 bp TCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAATCCTCCAGGAATGAGTaGAAAAGGAGAGCGCACGGC +
Preference number: 4 (lower is better)
Translates to: SGMYTWPRYPSYNTGREQSSRNE*KRRAHG
Trigger: GCCGTGCGCTCTCCTTTTGCACTCATTCCTGGAGGA...TTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR GCA 90 bp GAGCAATGGAAGGACTGGCTGGAGGCCTCCCATCCATTTCGGACAAACACACACCTTGCACACAGGCTCTaGTCATATGGGAAACAGGCC +
Preference number: 4 (lower is better)
Translates to: EQWKDWLEASHPFRTNTHLAHRL*SYGKQA
Trigger: GGCCTGTTTCCCATATGAGCAGAGCCTGTGTGCAAG...GTGTGTGTTTGTCCGAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp CTCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGCTGGGCGTAAGATGCTaGCTAACAGGCATAACCCCT +
Preference number: 4 (lower is better)
Translates to: LINSSGMYTWPRYPSYNTLGVRC*LTGITP
Trigger: AGGGGTTATGCCTGTTAGGCAGCATCTTACGCCCAG...CGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp GCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCTCTTGTCATAGCCTCTaGTCCGTTTCCACTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ATVPFVQHGKRTTGRPRGSCHSL*SVSTGK
Trigger: TTTGCCAGTGGAAACGGAGCAGAGGCTATGACAAGA...GCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp CTCCACTCTCCAGTGGCAACCTCACATTCTGGTACTGTGCAAAGCGGAGACCGAAATGGAAGGACTGGCTaGAGGCCTCCCATCCATTTC +
Preference number: 4 (lower is better)
Translates to: LHSPVATSHSGTVQSGDRNGRTG*RPPIHF
Trigger: GAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATT...TCGGTCTCCGCTTTGCACAGTACCAGAATGTGAGGTTGCCACTGGAGAGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp CTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAATGGAAGGACTGGCTaGAGGCCTCCCATCCATTTC +
Preference number: 4 (lower is better)
Translates to: LACTRGHGTLRTTREENNNGRTG*RPPIHF
Trigger: GAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATT...GTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp AACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGAAAGGCTGTCTGGCATGTACACGTaGCCACGGTACCCTTCGTAC +
Preference number: 4 (lower is better)
Translates to: NNRTPKRHLDSTQQTERLSGMYT*PRYPSY
Trigger: GTACGAAGGGTACCGTGGCCACGTGTACATGCCAGA...CAGCCTTTCTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp CTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACTCTCATCAACAGCTCTaGCATGTACACGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: LACTRGHGTLRTTREENNSHQQL*HVHVAT
Trigger: CGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGA...GTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp TCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGCAGGCTCTGCTCATATaGGAAACAGGCCTGACACAC +
Preference number: 4 (lower is better)
Translates to: SSTALACTRGHGTLRTTRQALLI*ETGLTH
Trigger: GTGTGTCAGGCCTGTTTCCCATATGAGCAGAGCCTG...CCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp GGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGAACCCAGTAAAGGGCTaGAGAGGAGTAGGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: GKRTTGRPRGIWTAHSKQNPVKG*RGVGAN
Trigger: ATTGGCCCCTACTCCTCTCCAGCCCTTTACTGGGTT...CTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp CAGATGGGCTCTCTCTGCTACAAAGCACCTGGTAGTATAGGTGGCAGGGAGCCTCCGGCCATATTCCTCTaGGCCCAACTACAGATCTAC +
Preference number: 4 (lower is better)
Translates to: QMGSLCYKAPGSIGGREPPAIFL*AQLQIY
Trigger: GTAGATCTGTAGTTGGGCCCAGAGGAATATGGCCGG...AGGCTCCCTGCCACCTATACTACCAGGTGCTTTGTAGCAGAGAGAGCCCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR CCA 90 bp GTCCCTTCTCCACAAGTAAGTCTCCTGTCCGGCCATATTCCTCTGGGCCCAACTGTCCTAACTCTTAGCTaGCTAGCTCTCCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VPSPQVSLLSGHIPLGPTVLTLS*LALPPA
Trigger: AGCTGGAGGGAGAGCTAGCCAGCTAAGAGTTAGGAC...AGTTGGGCCCAGAGGAATATGGCCGGACAGGAGACTTACTTGTGGAGAAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR TCA 90 bp TGCCTAACAGGCATAACCCCTTGCTCTAACCAGCCTAGGGCCAGTATGTTTTTGCTGTTCACCAGGCCATaGAACTCCTCCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CLTGITPCSNQPRASMFLLFTRP*NSSQAL
Trigger: CAAGGCCTGGGAGGAGTTTCATGGCCTGGTGAACAG...CAAAAACATACTGGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGTTAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409514.5
CDS-3UTR TCA 90 bp GAGCGCACGGCTCAGGGACGTCCCTTCAGTGAGCAATGGAAGGACTGGCTGGAGGTTGCTATAGGACTCTaGCGCTATTTATTTGAATCC +
Preference number: 4 (lower is better)
Translates to: ERTAQGRPFSEQWKDWLEVAIGL*RYLFES
Trigger: GGATTCAAATAAATAGCGTCAGAGTCCTATAGCAAC...CTCCAGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCCTGAGCCGTGCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp TCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAACAACAGTCAGGTAGATaGCCAAAGGAGGGCAAATCC +
Preference number: 4 (lower is better)
Translates to: STALACTRGHGTLRTTREQQSGR*PKEGKS
Trigger: GGATTTGCCCTCCTTTGGGCATCTACCTGACTGTTG...TTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp TCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGACACTGGGCGTAAGATaGTGCCTAACAGGCATAACC +
Preference number: 4 (lower is better)
Translates to: SSTALACTRGHGTLRTTRTLGVR*CLTGIT
Trigger: GGTTATGCCTGTTAGGCAGCATCTTACGCCCAGTGT...CCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp TCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAACACATTCTGGTACTGTaGAAAGCGGAGACCGACTCT +
Preference number: 4 (lower is better)
Translates to: STALACTRGHGTLRTTREHILVL*KAETDS
Trigger: AGAGTCGGTCTCCGCTTTGCACAGTACCAGAATGTG...TTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp CGGCTCAGGGACGTCCCTTCAGTGAGCAATGGAAGGACTGGCTGGAGGCCTCCCACTGCAGTAGATAATTaGTCTGAAAGTGCAACACTA +
Preference number: 4 (lower is better)
Translates to: RLRDVPSVSNGRTGWRPPTAVDN*SESATL
Trigger: TAGTGTTGCACTTTCAGAGCAATTATCTACTGCAGT...GGGAGGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCCTGAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp TGGTCTGTCCCTTCTCCACAAGTAAGTCTCCTGTCCGGCCATATTCCTCTGGGCCAGATGGGCTCTCTCTaGTACAAAGCACCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: WSVPSPQVSLLSGHIPLGQMGSL*YKAPGS
Trigger: ACTACCAGGTGCTTTGTAGCAGAGAGAGCCCATCTG...GCCCAGAGGAATATGGCCGGACAGGAGACTTACTTGTGGAGAAGGGACAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR GCA 90 bp GAAGGCCTGGTCTGTCCCTTCTCCACAAGTAAGTCTCCTGTCCGGCCATATTCCGTACAACTGGGTTTCTaGAGATGGGCTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: EGLVCPFSTSKSPVRPYSVQLGF*RWALSA
Trigger: AGCAGAGAGAGCCCATCTGCAGAAACCCAGTTGTAC...GGAATATGGCCGGACAGGAGACTTACTTGTGGAGAAGGGACAGACCAGGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR CCA 90 bp AACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGAAAGGCTGAATGGAAGGACTGGCTaGAGGCCTCCCATCCATTTC +
Preference number: 4 (lower is better)
Translates to: NNRTPKRHLDSTQQTERLNGRTG*RPPIHF
Trigger: GAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATT...CAGCCTTTCTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CCA 90 bp ATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACCAGGCTCTGCTCATATaGGAAACAGGCCTGACACAC +
Preference number: 4 (lower is better)
Translates to: MYTWPRYPSYNTGREQQDQALLI*ETGLTH
Trigger: GTGTGTCAGGCCTGTTTCCCATATGAGCAGAGCCTG...GTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCCAAGAGGTTTCTGCCTaGGCATCACAATCAGCACAC +
Preference number: 4 (lower is better)
Translates to: TVPFVQHGKRTTGRPRGIQEVSA*ASQSAH
Trigger: GTGTGCTGATTGTGATGCCCAGGCAGAAACCTCTTG...GATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp GAAGGCCTGGTCTGTCCCTTCTCCACAAGTAAGTCTCCTGTCCGGCCATATTCCCTGGGTTTCTGCAGATaGGCTCTCTCTGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: EGLVCPFSTSKSPVRPYSLGFCR*ALSATK
Trigger: CTTTGTAGCAGAGAGAGCCCATCTGCAGAAACCCAG...GGAATATGGCCGGACAGGAGACTTACTTGTGGAGAAGGGACAGACCAGGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR TCA 90 bp GCAAATAAAGCCATCCAGCAAGGTCACCTTTTCCTCAGATGCCCCAGTTTCAGGTCCGTCCTCCAGGAATaGGTGCAAAAGGAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: ANKAIQQGHLFLRCPSFRSVLQE*VQKESA
Trigger: TGCGCTCTCCTTTTGCACTCATTCCTGGAGGACGGA...CCTGAAACTGGGGCATCTGAGGAAAAGGTGACCTTGCTGGATGGCTTTATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp ATACTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTGCTTCCCTTCCTCAATaGGGGACATGCCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: ILVTLINSSGMYTWPRYPASLPQ*GTCQKQ
Trigger: CTGTTTCTGGCATGTCCCTCATTGAGGAAGGGAAGC...AGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp TCCACAAGTAAGTCTCCTGTCCGGCCATATTCCTCTGGGCCCAACTACAGATCTCCCCCAACACGTACTTaGTGCTGTCGGTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: STSKSPVRPYSSGPNYRSPPTRT*CCRCEF
Trigger: AAACTCACACCGACAGCATCAAGTACGTGTTGGGGG...AGATCTGTAGTTGGGCCCAGAGGAATATGGCCGGACAGGAGACTTACTTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR TCA 90 bp GTAGAAATTAAGCAAGCCCAGGTAGTACAACTGGGTTTCTGCAGATGGGCTCTCGGCAGGGAGCCTCGCTaGCAAAGAACTGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: VEIKQAQVVQLGFCRWALGREPR*QRTAAS
Trigger: ACTTGCTGCAGTTCTTTGTCAGCGAGGCTCCCTGCC...GAGAGCCCATCTGCAGAAACCCAGTTGTACTACCTGGGCTTGCTTAATTTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR TCA 90 bp GCCCAGGTAGTACAACTGGGTTTCTGCAGATGGGCTCTCTCTGCTACAAAGCACCTGACACTCAATCACTaGGGAGCAAGCCTAACAGTG +
Preference number: 4 (lower is better)
Translates to: AQVVQLGFCRWALSATKHLTLNH*GASLTV
Trigger: CACTGTTAGGCTTGCTCCTCAGTGATTGAGTGTCAG...GTGCTTTGTAGCAGAGAGAGCCCATCTGCAGAAACCCAGTTGTACTACCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR TCA 90 bp GCCCAGGTAGTACAACTGGGTTTCTGCAGATGGGCTCTCTCTGCTACAAAGCACAGCTTTGAGACAATCTaGCAGCCACTCCCCACACTT +
Preference number: 4 (lower is better)
Translates to: AQVVQLGFCRWALSATKHSFETI*QPLPTL
Trigger: AAGTGTGGGGAGTGGCTGTCAGATTGTCTCAAAGCT...GTGCTTTGTAGCAGAGAGAGCCCATCTGCAGAAACCCAGTTGTACTACCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR GCA 90 bp GCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCCTGACACACAGGGTCTaGTCATATGGGAAAATGATT +
Preference number: 4 (lower is better)
Translates to: ATVPFVQHGKRTTGRPRGLTHRV*SYGKMI
Trigger: AATCATTTTCCCATATGAGCAGACCCTGTGTGTCAG...GCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp ATACTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTCTTGCACACAGGCTCTaGTCATATGGGAAACAGGCC +
Preference number: 4 (lower is better)
Translates to: ILVTLINSSGMYTWPRYPLAHRL*SYGKQA
Trigger: GGCCTGTTTCCCATATGAGCAGAGCCTGTGTGCAAG...AGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp GCGGAGACCGACTCTTCACTCTCCTCACATTCTGGTTACGTTGGCCCTGGTAGATCTTCAAGAGGTTTCTaGCTGGGCATCACAATCAGC +
Preference number: 4 (lower is better)
Translates to: AETDSSLSSHSGYVGPGRSSRGF*LGITIS
Trigger: GCTGATTGTGATGCCCAGGCAGAAACCTCTTGAAGA...TCTACCAGGGCCAACGTAACCAGAATGTGAGGAGAGTGAAGAGTCGGTCTCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp TCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAACAGTCAGGTAGATaGCCAAAGGAGGGCAAATCC +
Preference number: 4 (lower is better)
Translates to: SGMYTWPRYPSYNTGREQQQSGR*PKEGKS
Trigger: GGATTTGCCCTCCTTTGGGCATCTACCTGACTGTTG...TTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp TGCCTAACAGGCATAACCCCTTGCTCTAACCAGCCTAGGGCCAGTATGTTTTTGACAGGCATAACCCCTTaGTCTAACCAGCCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: CLTGITPCSNQPRASMFLTGITP*SNQPRA
Trigger: GGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGT...CAAAAACATACTGGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGTTAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp TCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACACATTCTGGTACTGTaGAAAGCGGAGACCGACTCT +
Preference number: 4 (lower is better)
Translates to: SGMYTWPRYPSYNTGREQHILVL*KAETDS
Trigger: AGAGTCGGTCTCCGCTTTGCACAGTACCAGAATGTG...TTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp GCCCAGGTAGTACAACTGGGTTTCTGCAGATGGGCTCTCTCTGCTACAAAGCACCAGATGGGCTCTCTCTaGTACAAAGCACCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: AQVVQLGFCRWALSATKHQMGSL*YKAPGS
Trigger: ACTACCAGGTGCTTTGTAGCAGAGAGAGCCCATCTG...GTGCTTTGTAGCAGAGAGAGCCCATCTGCAGAAACCCAGTTGTACTACCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR CCA 90 bp GCAAATAAAGCCATCCAGCAAGGTCACCTTTTCCTCAGATGCCCCAGTTTCAGGAGCTTCAGAAAGTGGTaGGCTTGGAGGAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ANKAIQQGHLFLRCPSFRSFRKW*AWRRGE
Trigger: CTCTCCCCTCCTCCAAGCCCACCACTTTCTGAAGCT...CCTGAAACTGGGGCATCTGAGGAAAAGGTGACCTTGCTGGATGGCTTTATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp CTCCACTCTCCAGTGGCAACCTCACATTCTGGTACTGTGCAAAGCGGAGACCGACCCTTCACAACTGTCTaGACACCAGAATGCACTCTT +
Preference number: 4 (lower is better)
Translates to: LHSPVATSHSGTVQSGDRPFTTV*TPECTL
Trigger: AAGAGTGCATTCTGGTGTCCAGACAGTTGTGAAGGG...TCGGTCTCCGCTTTGCACAGTACCAGAATGTGAGGTTGCCACTGGAGAGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp CAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGAAAGGCTGAAGGCAACCTCACATTCTaGTACTGTGCAAAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: QQDAQEASGQHTANRKAEGNLTF*YCAKRR
Trigger: TCTCCGCTTTGCACAGTACCAGAATGTGAGGTTGCC...TTCAGCCTTTCTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp GCAAGCCCAGGTAGTACAACTGGGTTTCTGCAGATGGGCTCTCTCTGCTACAAACCGGCCATATTCCTCTaGGCCCAACTACAGATCTAC +
Preference number: 4 (lower is better)
Translates to: ASPGSTTGFLQMGSLCYKPAIFL*AQLQIY
Trigger: GTAGATCTGTAGTTGGGCCCAGAGGAATATGGCCGG...TTTGTAGCAGAGAGAGCCCATCTGCAGAAACCCAGTTGTACTACCTGGGCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR CCA 90 bp AGAGTCCTAACTCTTAGCTGGCTAGCTCTCCCTCCAGCTTTGAGACAATCTGACCCTAGAGGGAAGGCCTaGTCTGTCCCTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: RVLTLSWLALPPALRQSDPRGKA*SVPSPQ
Trigger: TTGTGGAGAAGGGACAGACCAGGCCTTCCCTCTAGG...GTCAGATTGTCTCAAAGCTGGAGGGAGAGCTAGCCAGCTAAGAGTTAGGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR TCA 90 bp AACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGAAAGGCTGCTCTTGCTACTGCTCTaGTTCTTGTCTCGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: NNRTPKRHLDSTQQTERLLLLLL*FLSRSV
Trigger: AACGGAACGAGACAAGAATCAGAGCAGTAGCAAGAG...CAGCCTTTCTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp CGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACAAGCTTGAATTGTCCTTaGTGCTGTCGGTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: RTTREENNRTPKRHLDSTSLNCP*CCRCEF
Trigger: AAACTCACACCGACAGCATCAAGGACAATTCAAGCT...TGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409098.5
CDS-3UTR GCA 90 bp CTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCGCCACCATTTTTATTTaGATCATCCTCCCACATGGG +
Preference number: 4 (lower is better)
Translates to: LRTTREENNRTPKRHLDSATIFI*IILPHG
Trigger: CCCATGTGGGAGGATGATGCAAATAAAAATGGTGGC...GCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp TGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGCTGACACACAGGGTCTaGTCATATGGGAAAATGATT +
Preference number: 4 (lower is better)
Translates to: WPRYPSYNTGREQQDAQELTHRV*SYGKMI
Trigger: AATCATTTTCCCATATGAGCAGACCCTGTGTGTCAG...CTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp TCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGCAATAACCAGCTTTTaGTTCCCTTCCTCAATGAGG +
Preference number: 4 (lower is better)
Translates to: SSTALACTRGHGTLRTTRAITSF*FPSSMR
Trigger: CCTCATTGAGGAAGGGAAGCAAAAGCTGGTTATTGC...CCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp TCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACGCAATAACCAGCTTTTaGTTCCCTTCCTCAATGAGG +
Preference number: 4 (lower is better)
Translates to: SYNTGREQQDAQEASGQHAITSF*FPSSMR
Trigger: CCTCATTGAGGAAGGGAAGCAAAAGCTGGTTATTGC...GTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp AACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGAAAGGCTGTCTTCAAGAGGTTTCTaGCTGGGCATCACAATCAGC +
Preference number: 4 (lower is better)
Translates to: NNRTPKRHLDSTQQTERLSSRGF*LGITIS
Trigger: GCTGATTGTGATGCCCAGGCAGAAACCTCTTGAAGA...CAGCCTTTCTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp GGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGTATTTGAATCCTAGGTaGTCTTGTGACTTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: GHGTLRTTREENNRTPKRYLNPR*SCDFSD
Trigger: GTCAGAGAAGTCACAAGAGCACCTAGGATTCAAATA...CCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp TGCCTAACAGGCATAACCCCTTGCTCTAACCAGCCTAGGGCCAGTATGTTTTTGCTGGGCGTAAGATGCTaGCTAACAGGCATAACCCCT +
Preference number: 4 (lower is better)
Translates to: CLTGITPCSNQPRASMFLLGVRC*LTGITP
Trigger: AGGGGTTATGCCTGTTAGGCAGCATCTTACGCCCAG...CAAAAACATACTGGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGTTAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp AACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGAAAGGCTGTCTTGTCATAGCCTCTaGTCCGTTTCCACTGGCAAA +
Preference number: 4 (lower is better)
Translates to: NNRTPKRHLDSTQQTERLSCHSL*SVSTGK
Trigger: TTTGCCAGTGGAAACGGAGCAGAGGCTATGACAAGA...CAGCCTTTCTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp TGCCTAACAGGCATAACCCCTTGCTCTAACCAGCCTAGGGCCAGTATGTTTTTGAACCCAGTAAAGGGCTaGAGAGGAGTAGGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: CLTGITPCSNQPRASMFLNPVKG*RGVGAN
Trigger: ATTGGCCCCTACTCCTCTCCAGCCCTTTACTGGGTT...CAAAAACATACTGGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGTTAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGATTCTTCGAGCATTGTaGACCACAAGCTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TTREENNRTPKRHLDSTQILRAL*TTSFSL
Trigger: CAGAGAGAAGCTTGTGGTCCACAATGCTCGAAGAAT...CTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp AAGTCTCCTGTCCGGCCATATTCCTCTGGGCCCAACTACAGATCTACTTATACTCCTAGAGGGAAGGCCTaGTCTGTCCCTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: KSPVRPYSSGPNYRSTYTPRGKA*SVPSPQ
Trigger: TTGTGGAGAAGGGACAGACCAGGCCTTCCCTCTAGG...AGTATAAGTAGATCTGTAGTTGGGCCCAGAGGAATATGGCCGGACAGGAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
3UTR CAA 72 bp GTCCTAACTCTTAGCTGGCTAGCTCTCCCTCCAGCTTaGAGACAATCTGACAGCCACTCCCCACACTTTTTC +
Preference number: 4 (lower is better)
Translates to: VLTLSWLALPPA*RQSDSHSPHFF
Trigger: GAAAAAGTGTGGGGAGTGGCTGTCAGATTGTCTCAAAGCTGGAGGGAGAGCTAGCCAGCTAAGAGTTAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR TCA 90 bp GAGCAATGGAAGGACTGGCTGGAGGCCTCCCATCCATTTCGGACAAACACACACCTGACGCTATTTATTTaGATCCTAGGTGCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: EQWKDWLEASHPFRTNTHLTLFI*ILGALV
Trigger: CACAAGAGCACCTAGGATTCAAATAAATAGCGTCAG...GTGTGTGTTTGTCCGAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp GTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGCTGACGCTATTTATTTaGATCCTAGGTGCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: VPFVQHGKRTTGRPRGIWLTLFI*ILGALV
Trigger: CACAAGAGCACCTAGGATTCAAATAAATAGCGTCAG...CCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp CTCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGGCCAGTATGTTTTTaGTGGAAAAGACAACTGTCA +
Preference number: 4 (lower is better)
Translates to: LINSSGMYTWPRYPSYNTGPVCF*WKRQLS
Trigger: TGACAGTTGTCTTTTCCATCAAAAACATACTGGCCC...CGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp AAGTCTCCTGTCCGGCCATATTCCTCTGGGCCCAACTACAGATCTACTTATACTCTCTCCCTCCAGCTTTaGGACAATCTGACAGCCACT +
Preference number: 4 (lower is better)
Translates to: KSPVRPYSSGPNYRSTYTLSLQL*DNLTAT
Trigger: AGTGGCTGTCAGATTGTCTCAAAGCTGGAGGGAGAG...AGTATAAGTAGATCTGTAGTTGGGCCCAGAGGAATATGGCCGGACAGGAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR GCA 90 bp TACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCCACCATTTTTATTTaGATCATCCTCCCACATGGG +
Preference number: 4 (lower is better)
Translates to: YNTGREQQDAQEASGQHTATIFI*IILPHG
Trigger: CCCATGTGGGAGGATGATGCAAATAAAAATGGTGGC...TGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp ACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGTCATTTTTAAAGCATaGCTGCAGCAGTCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: TWPRYPSYNTGREQQDAQVIFKA*LQQSSR
Trigger: TCTTGAAGACTGCTGCAGGCATGCTTTAAAAATGAC...TTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp CAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGGAAAATTATTGCCACTaGCAGTATCATAGGGAACAC +
Preference number: 4 (lower is better)
Translates to: QQLWHVHVATVPFVQHGKENYCH*QYHREH
Trigger: GTGTTCCCTATGATACTGGCAGTGGCAATAATTTTC...CTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp GCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCACTGCAGTAGATAATTaGTCTGAAAGTGCAACACTA +
Preference number: 4 (lower is better)
Translates to: ATVPFVQHGKRTTGRPRGTAVDN*SESATL
Trigger: TAGTGTTGCACTTTCAGAGCAATTATCTACTGCAGT...GCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ACAACAACAACAACAACAACAAAACTATGGACAACACACCTAGCCAGGAGGCCTGAGCAATGGAAGGACTaGCTGGAGGCCTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: TTTTTTTKLWTTHLARRPEQWKD*LEASHP
Trigger: TGGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTC...AGGCCTCCTGGCTAGGTGTGTTGTCCATAGTTTTGTTGTTGTTGTTGTTGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGACCAGTGAGAGCCACTaGATTACAATTCTAAGTGCA +
Preference number: 4 (lower is better)
Translates to: TTREENNRTPKRHLDSTQTSESH*ITILSA
Trigger: TGCACTTAGAATTGTAATCCAGTGGCTCTCACTGGT...CTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGACAGGGTCTGCTCATATaGGAAAATGATTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: INSSGMYTWPRYPSYNTGQGLLI*ENDFSH
Trigger: GTGACTGAAATCATTTTCCCATATGAGCAGACCCTG...TCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCCAGGGTCTGCTCATATaGGAAAATGATTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: TVPFVQHGKRTTGRPRGIQGLLI*ENDFSH
Trigger: GTGACTGAAATCATTTTCCCATATGAGCAGACCCTG...GATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp TGCCTAACAGGCATAACCCCTTGCTCTAACCAGCCTAGGGCCAGTATGTTTTTGCAAGAGGTTTCTGCCTaGGCATCACAATCAGCACAC +
Preference number: 4 (lower is better)
Translates to: CLTGITPCSNQPRASMFLQEVSA*ASQSAH
Trigger: GTGTGCTGATTGTGATGCCCAGGCAGAAACCTCTTG...CAAAAACATACTGGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGTTAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCGAGGGTGTTCAGGAATaGAAAAGTAGGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: TVPFVQHGKRTTGRPRGIEGVQE*KSRKSV
Trigger: TACACTCTTCCTACTTTTCCATTCCTGAACACCCTC...GATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ATACTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTCCCTTCACAACTGTCTaGACACCAGAATGCACTCTT +
Preference number: 4 (lower is better)
Translates to: ILVTLINSSGMYTWPRYPPFTTV*TPECTL
Trigger: AAGAGTGCATTCTGGTGTCCAGACAGTTGTGAAGGG...AGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CAA 72 bp AGACCGACTCTTCACTCTCCTCACATTCTGGTTACGTaGGCCCTGGTAGACCTTTATCCCTTTGCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: RPTLHSPHILVT*ALVDLYPFASV
Trigger: TACAGAGGCAAAGGGATAAAGGTCTACCAGGGCCAACGTAACCAGAATGTGAGGAGAGTGAAGAGTCGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp TCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACGCTCATATGGGAAAATaGTTTCAGTCACAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SYNTGREQQDAQEASGQHAHMGK*FQSQSL
Trigger: TAAGGACTGTGACTGAAATCATTTTCCCATATGAGC...GTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp TCTCCAGTGGCAACCTCACATTCTGGTACTGTGCAAAGCGGAGACCGACTCTTCGGGCCAGTATGTTTTTaGTGGAAAAGACAACTGTCA +
Preference number: 4 (lower is better)
Translates to: SPVATSHSGTVQSGDRLFGPVCF*WKRQLS
Trigger: TGACAGTTGTCTTTTCCATCAAAAACATACTGGCCC...GAAGAGTCGGTCTCCGCTTTGCACAGTACCAGAATGTGAGGTTGCCACTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp ATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGATGTATTTCGAAAGCTTaGATTGTCCTTGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: INSSGMYTWPRYPSYNTGCISKA*IVLDAV
Trigger: GACAGCATCAAGGACAATTCAAGCTTTCGAAATACA...TCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409098.5
CDS-3UTR GCA 90 bp TCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGAAAAGGATTATTaGCAGCTTGTGTACTCTCAC +
Preference number: 4 (lower is better)
Translates to: SYNTGREQQDAQEASGQHTEKDY*QLVYSH
Trigger: GTGAGAGTACACAAGCTGGCAATAATCCTTTTCTGT...GTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR GCA 90 bp GAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGAAAGGCTCAATCAGCACACATTTaGTCATACACATACCAGGTG +
Preference number: 4 (lower is better)
Translates to: EQQDAQEASGQHTANRKAQSAHI*SYTYQV
Trigger: CACCTGGTATGTGTATGAGCAAATGTGTGCTGATTG...AGCCTTTCTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ACAACAACAACAACAACAACAAAACTATGGACAACACACCTAGCCAGGAGGCCTCACAGCTTCAGAAAGTaGTGGGCTTGGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TTTTTTTKLWTTHLARRPHSFRK*WAWRRG
Trigger: TCCCCTCCTCCAAGCCCACCACTTTCTGAAGCTGTG...AGGCCTCCTGGCTAGGTGTGTTGTCCATAGTTTTGTTGTTGTTGTTGTTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp GGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGAGAGGGTGTTCAGGAATaGAAAAGTAGGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: GREQQDAQEASGQHTANREGVQE*KSRKSV
Trigger: TACACTCTTCCTACTTTTCCATTCCTGAACACCCTC...TCTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp CAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGAAAGGCTGAAACAACAACAAAACTATaGACAACACACCTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QQDAQEASGQHTANRKAETTTKL*TTHLAR
Trigger: CCTGGCTAGGTGTGTTGTCCATAGTTTTGTTGTTGT...TTCAGCCTTTCTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp GGGAGATTGCCAAGCTTATTTTCCCTGTGGCCTTCATGCTTCCCTTTGATTCTGCTGGGTTTCTGCAGATaGGCTCTCTCTGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: GRLPSLFSLWPSCFPLILLGFCR*ALSATK
Trigger: CTTTGTAGCAGAGAGAGCCCATCTGCAGAAACCCAG...CAGAATCAAAGGGAAGCATGAAGGCCACAGGGAAAATAAGCTTGGCAATCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR TCA 90 bp CTGTGGACAGAGAGCTCTATTTCCCTGAGTCCTAGGGAGATTGCCAAGCTTATTCTCTTGCTACTGCTCTaGTTCTTGTCTCGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: LWTESSISLSPREIAKLILLLLL*FLSRSV
Trigger: AACGGAACGAGACAAGAATCAGAGCAGTAGCAAGAG...AATAAGCTTGGCAATCTCCCTAGGACTCAGGGAAATAGAGCTCTCTGTCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR TCA 90 bp AAGTCTCCTGTCCGGCCATATTCCTCTGGGCCCAACTACAGATCTACTTATACTCTCTTGCTACTGCTCTaGTTCTTGTCTCGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: KSPVRPYSSGPNYRSTYTLLLLL*FLSRSV
Trigger: AACGGAACGAGACAAGAATCAGAGCAGTAGCAAGAG...AGTATAAGTAGATCTGTAGTTGGGCCCAGAGGAATATGGCCGGACAGGAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR TCA 90 bp ATAATACTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCTCTTGCTACTGCTCTaGTTCTTGTCTCGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: IILVTLINSSGMYTWPRYLLLLL*FLSRSV
Trigger: AACGGAACGAGACAAGAATCAGAGCAGTAGCAAGAG...GTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTATTAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp TCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAAGTTGCTATAGGACTCTaGCGCTATTTATTTGAATCC +
Preference number: 4 (lower is better)
Translates to: SGMYTWPRYPSYNTGREQVAIGL*RYLFES
Trigger: GGATTCAAATAAATAGCGTCAGAGTCCTATAGCAAC...TTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp GAGCAATGGAAGGACTGGCTGGAGGCCTCCCATCCATTTCGGACAAACACACACCTAGATCTTCTTATCTaGTCTAACTTGCCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: EQWKDWLEASHPFRTNTHLDLLI*SNLPCN
Trigger: ATTACAGGGCAAGTTAGATCAGATAAGAAGATCTAG...GTGTGTGTTTGTCCGAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp AGGGAGATTGCCAAGCTTATTTTCCCTGTGGCCTTCATGCTTCCCTTTGATTCTAGAGCTCTATTTCCCTaGGTCCTAGGGAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: REIAKLIFPVAFMLPFDSRALFP*VLGRLP
Trigger: TGGCAATCTCCCTAGGACTCAGGGAAATAGAGCTCT...AGAATCAAAGGGAAGCATGAAGGCCACAGGGAAAATAAGCTTGGCAATCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR GCA 90 bp AGAGTCCTAACTCTTAGCTGGCTAGCTCTCCCTCCAGCTTTGAGACAATCTGACGCCACCATTTTTATTTaGATCATCCTCCCACATGGG +
Preference number: 4 (lower is better)
Translates to: RVLTLSWLALPPALRQSDATIFI*IILPHG
Trigger: CCCATGTGGGAGGATGATGCAAATAAAAATGGTGGC...GTCAGATTGTCTCAAAGCTGGAGGGAGAGCTAGCCAGCTAAGAGTTAGGACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR GCA 90 bp CAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGAAAGGCTGAAACAGAAAAGGATTATTaGCAGCTTGTGTACTCTCAC +
Preference number: 4 (lower is better)
Translates to: QQDAQEASGQHTANRKAETEKDY*QLVYSH
Trigger: GTGAGAGTACACAAGCTGGCAATAATCCTTTTCTGT...TTCAGCCTTTCTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR GCA 90 bp ATTCATAATACTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTGGCCACGGCATTCCCTCTAAGCTaGCTCAGTGAAACCAGTGAG +
Preference number: 4 (lower is better)
Translates to: IHNTGNSHQQLWHVHVATAFPLS*LSETSE
Trigger: CTCACTGGTTTCACTGAGGCAGCTTAGAGGGAATGC...CGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTATTATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp TCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAATATTTGAATCCTAGGTaGTCTTGTGACTTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SGMYTWPRYPSYNTGREQYLNPR*SCDFSD
Trigger: GTCAGAGAAGTCACAAGAGCACCTAGGATTCAAATA...TTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp AGGGAGATTGCCAAGCTTATTTTCCCTGTGGCCTTCATGCTTCCCTTTGATTCTGTACAACTGGGTTTCTaGAGATGGGCTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: REIAKLIFPVAFMLPFDSVQLGF*RWALSA
Trigger: AGCAGAGAGAGCCCATCTGCAGAAACCCAGTTGTAC...AGAATCAAAGGGAAGCATGAAGGCCACAGGGAAAATAAGCTTGGCAATCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR GCA 90 bp CCTGAGCTTACTTCTGACACTCAATCACTGAGGAGCAAGCCTAACAGTGATTCTTCCCTGTGGCCTTCATaGTTCCCTTTGATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PELTSDTQSLRSKPNSDSSLWPS*FPLILL
Trigger: GAGCAGAATCAAAGGGAAGCATGAAGGCCACAGGGA...AGAATCACTGTTAGGCTTGCTCCTCAGTGATTGAGTGTCAGAAGTAAGCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR CCA 90 bp ATTACAAAGTCACGTTTTCCGTTTTTCCGCTTTATAAAGTCAGCGATGCTGGAGGAGCAATGGAAGGACTaGCTGGAGGCCTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: ITKSRFPFFRFIKSAMLEEQWKD*LEASHP
Trigger: TGGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTC...CTCCAGCATCGCTGACTTTATAAAGCGGAAAAACGGAAAACGTGACTTTGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACCATTTACAGCTATTTTaGGACTCTCCAACAGAACAC +
Preference number: 4 (lower is better)
Translates to: MYTWPRYPSYNTGREQQDHLQLF*DSPTEH
Trigger: GTGTTCTGTTGGAGAGTCCCAAAATAGCTGTAAATG...GTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp CGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACAGATGATACAAAATCCTaGACAGTCATCACATCAGTA +
Preference number: 4 (lower is better)
Translates to: RTTREENNRTPKRHLDSTDDTKS*TVITSV
Trigger: TACTGATGTGATGACTGTCCAGGATTTTGTATCATC...TGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp GCAAATAAAGCCATCCAGCAAGGTCACCTTTTCCTCAGATGCCCCAGTTTCAGGATTCTTCGAGCATTGTaGACCACAAGCTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ANKAIQQGHLFLRCPSFRILRAL*TTSFSL
Trigger: CAGAGAGAAGCTTGTGGTCCACAATGCTCGAAGAAT...CCTGAAACTGGGGCATCTGAGGAAAAGGTGACCTTGCTGGATGGCTTTATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp GGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGCAAACAGACCACTGGCAAATACTTaGAAATTCATTCTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: GREQQDAQEASGQHTANRPLANT*KFILRA
Trigger: TGCTCGAAGAATGAATTTCCAAGTATTTGCCAGTGG...TCTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp AGATGCTGCCTAACAGGCATAACCCCTTGCTCTAACCAGCCTAGGGCCAGTATGCCACTGGCAAATACTTaGAAATTCATTCTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: RCCLTGITPCSNQPRASMPLANT*KFILRA
Trigger: TGCTCGAAGAATGAATTTCCAAGTATTTGCCAGTGG...CATACTGGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGTTAGGCAGCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp AGAGTCCTAACTCTTAGCTGGCTAGCTCTCCCTCCAGCTTTGAGACAATCTGACAGCTTATTTTCCCTGTaGCCTTCATGCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: RVLTLSWLALPPALRQSDSLFSL*PSCFPL
Trigger: CAAAGGGAAGCATGAAGGCCACAGGGAAAATAAGCT...GTCAGATTGTCTCAAAGCTGGAGGGAGAGCTAGCCAGCTAAGAGTTAGGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR CCA 90 bp TCCACAAGTAAGTCTCCTGTCCGGCCATATTCCTCTGGGCCCAACTACAGATCTAGGCACATATTGGTATaGGGCCATATGAGAGAACTA +
Preference number: 4 (lower is better)
Translates to: STSKSPVRPYSSGPNYRSRHILV*GHMREL
Trigger: TAGTTCTCTCATATGGCCCCATACCAATATGTGCCT...AGATCTGTAGTTGGGCCCAGAGGAATATGGCCGGACAGGAGACTTACTTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR TCA 90 bp TCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACTAGATCTTCTTATCTaGTCTAACTTGCCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SGMYTWPRYPSYNTGREQLDLLI*SNLPCN
Trigger: ATTACAGGGCAAGTTAGATCAGATAAGAAGATCTAG...TTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp AAGCAAGCCCAGGTAGTACAACTGGGTTTCTGCAGATGGGCTCTCTCTGCTACAATAGTGGTTAGCATATaGAAGACAAGACAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: KQAQVVQLGFCRWALSATIVVSI*KTRQPV
Trigger: TACAGGCTGTCTTGTCTTTCATATGCTAACCACTAT...TGTAGCAGAGAGAGCCCATCTGCAGAAACCCAGTTGTACTACCTGGGCTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR GCA 90 bp AAGTCTCCTGTCCGGCCATATTCCTCTGGGCCCAACTACAGATCTACTTATACTGCCACCATTTTTATTTaGATCATCCTCCCACATGGG +
Preference number: 4 (lower is better)
Translates to: KSPVRPYSSGPNYRSTYTATIFI*IILPHG
Trigger: CCCATGTGGGAGGATGATGCAAATAAAAATGGTGGC...AGTATAAGTAGATCTGTAGTTGGGCCCAGAGGAATATGGCCGGACAGGAGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR GCA 90 bp ATACTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTTTTTAAAGCATGCCTaGAGCAGTCTTCAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ILVTLINSSGMYTWPRYPFLKHA*SSLQEV
Trigger: AACCTCTTGAAGACTGCTGCAGGCATGCTTTAAAAA...AGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ATTACAAAGTCACGTTTTCCGTTTTTCCGCTTTATAAAGTCAGCGATGCTGGAGCGCCCAAGAGGCATCTaGACAGCACACAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: ITKSRFPFFRFIKSAMLERPRGI*TAHSKQ
Trigger: CTGTTTGCTGTGTGCTGTCCAGATGCCTCTTGGGCG...CTCCAGCATCGCTGACTTTATAAAGCGGAAAAACGGAAAACGTGACTTTGTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp TTTACTAAGGCATTCCCTCTAAGCTGCCTCAGTGAAACCAGTGAGAGCCACTGGAGCTTCTCTGATGAGTaGCTGGTCATTTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: FTKAFPLSCLSETSESHWSFSDE*LVIFKA
Trigger: TGCTTTAAAAATGACCAGTCACTCATCAGAGAAGCT...CCAGTGGCTCTCACTGGTTTCACTGAGGCAGCTTAGAGGGAATGCCTTAGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp TGCCTAACAGGCATAACCCCTTGCTCTAACCAGCCTAGGGCCAGTATGTTTTTGAGCTTCTCTGATGAGTaGCTGGTCATTTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: CLTGITPCSNQPRASMFLSFSDE*LVIFKA
Trigger: TGCTTTAAAAATGACCAGTCACTCATCAGAGAAGCT...CAAAAACATACTGGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGTTAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp GCAAATAAAGCCATCCAGCAAGGTCACCTTTTCCTCAGATGCCCCAGTTTCAGGGTCATTTTTAAAGCATaGCTGCAGCAGTCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: ANKAIQQGHLFLRCPSFRVIFKA*LQQSSR
Trigger: TCTTGAAGACTGCTGCAGGCATGCTTTAAAAATGAC...CCTGAAACTGGGGCATCTGAGGAAAAGGTGACCTTGCTGGATGGCTTTATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp TACGTTGGCCCTGGTAGACCTTTATCCCTTTGCCTCTGTAACGGTGATACCATAACCAGTGAGAGCCACTaGATTACAATTCTAAGTGCA +
Preference number: 4 (lower is better)
Translates to: YVGPGRPLSLCLCNGDTITSESH*ITILSA
Trigger: TGCACTTAGAATTGTAATCCAGTGGCTCTCACTGGT...TATGGTATCACCGTTACAGAGGCAAAGGGATAAAGGTCTACCAGGGCCAACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp TCTCACAATGTGATTTTTGTATTTCGAAAGCTTGAATTGTCCCCTGAGTGTGAGGCTTCCCTTCCTCAATaGGGGACATGCCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: SHNVIFVFRKLELSPECEASLPQ*GTCQKQ
Trigger: CTGTTTCTGGCATGTCCCTCATTGAGGAAGGGAAGC...CTCACACTCAGGGGACAATTCAAGCTTTCGAAATACAAAAATCACATTGTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409514.5
CDS-3UTR TCA 90 bp GTAGAAATTAAGCAAGCCCAGGTAGTACAACTGGGTTTCTGCAGATGGGCTCTCATAGTGGTTAGCATATaGAAGACAAGACAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: VEIKQAQVVQLGFCRWALIVVSI*KTRQPV
Trigger: TACAGGCTGTCTTGTCTTTCATATGCTAACCACTAT...GAGAGCCCATCTGCAGAAACCCAGTTGTACTACCTGGGCTTGCTTAATTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409167.7
ENST00000409495.5
CDS-3UTR GCA 90 bp ATAATACTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACACAGAAAAGGATTATTaGCAGCTTGTGTACTCTCAC +
Preference number: 4 (lower is better)
Translates to: IILVTLINSSGMYTWPRYTEKDY*QLVYSH
Trigger: GTGAGAGTACACAAGCTGGCAATAATCCTTTTCTGT...GTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409098.5
ENST00000409514.5
ENST00000444113.1
CDS-3UTR GCA 90 bp ATTACAAAGTCACGTTTTCCGTTTTTCCGCTTTATAAAGTCAGCGATGCTGGAGGCATTCCCTCTAAGCTaGCTCAGTGAAACCAGTGAG +
Preference number: 4 (lower is better)
Translates to: ITKSRFPFFRFIKSAMLEAFPLS*LSETSE
Trigger: CTCACTGGTTTCACTGAGGCAGCTTAGAGGGAATGC...CTCCAGCATCGCTGACTTTATAAAGCGGAAAAACGGAAAACGTGACTTTGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp CTTCACTCTCCTCACATTCTGGTTACGTTGGCCCTGGTAGACCTTTATCCCTTTTTTTTAAAGCATGCCTaGAGCAGTCTTCAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LHSPHILVTLALVDLYPFFLKHA*SSLQEV
Trigger: AACCTCTTGAAGACTGCTGCAGGCATGCTTTAAAAA...AAAGGGATAAAGGTCTACCAGGGCCAACGTAACCAGAATGTGAGGAGAGTGAAG
44% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR TCA 90 bp ATTCATAATACTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTGGCCACGGCTCATATGGGAAAATaGTTTCAGTCACAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: IHNTGNSHQQLWHVHVATAHMGK*FQSQSL
Trigger: TAAGGACTGTGACTGAAATCATTTTCCCATATGAGC...CGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTATTATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp ACAACAACAACAACAACAACAAAACTATGGACAACACACCTAGCCAGGAGGCCTCAATCAGCACACATTTaGTCATACACATACCAGGTG +
Preference number: 4 (lower is better)
Translates to: TTTTTTTKLWTTHLARRPQSAHI*SYTYQV
Trigger: CACCTGGTATGTGTATGAGCAAATGTGTGCTGATTG...AGGCCTCCTGGCTAGGTGTGTTGTCCATAGTTTTGTTGTTGTTGTTGTTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR GCA 90 bp ACTGCAGTAGATAATTGCTCTGAAAGTGCAACACTAAATCACTCTTGTCATAGCACACTGGGCGTAAGATaGTGCCTAACAGGCATAACC +
Preference number: 4 (lower is better)
Translates to: TAVDNCSESATLNHSCHSTLGVR*CLTGIT
Trigger: GGTTATGCCTGTTAGGCAGCATCTTACGCCCAGTGT...GCTATGACAAGAGTGATTTAGTGTTGCACTTTCAGAGCAATTATCTACTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ACTGCAGTAGATAATTGCTCTGAAAGTGCAACACTAAATCACTCTTGTCATAGCGGCAACCTCACATTCTaGTACTGTGCAAAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: TAVDNCSESATLNHSCHSGNLTF*YCAKRR
Trigger: TCTCCGCTTTGCACAGTACCAGAATGTGAGGTTGCC...GCTATGACAAGAGTGATTTAGTGTTGCACTTTCAGAGCAATTATCTACTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
3UTR CAA 72 bp ATATTAAGTGTTAATAGGCCTGGCAATAACCAGCTTTaGCTTCCCTTCCTCAATGAGGGACATGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: ILSVNRPGNNQL*LPFLNEGHARN
Trigger: GTTTCTGGCATGTCCCTCATTGAGGAAGGGAAGCAAAAGCTGGTTATTGCCAGGCCTATTAACACTTAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ACAACAACAACAACAACAACAAAACTATGGACAACACACCTAGCCAGGAGGCCTGATGATACAAAATCCTaGACAGTCATCACATCAGTA +
Preference number: 4 (lower is better)
Translates to: TTTTTTTKLWTTHLARRPDDTKS*TVITSV
Trigger: TACTGATGTGATGACTGTCCAGGATTTTGTATCATC...AGGCCTCCTGGCTAGGTGTGTTGTCCATAGTTTTGTTGTTGTTGTTGTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp ATTACAAAGTCACGTTTTCCGTTTTTCCGCTTTATAAAGTCAGCGATGCTGGAGCATTTACAGCTATTTTaGGACTCTCCAACAGAACAC +
Preference number: 4 (lower is better)
Translates to: ITKSRFPFFRFIKSAMLEHLQLF*DSPTEH
Trigger: GTGTTCTGTTGGAGAGTCCCAAAATAGCTGTAAATG...CTCCAGCATCGCTGACTTTATAAAGCGGAAAAACGGAAAACGTGACTTTGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CCA 90 bp CCTTTTCCTCAGATGCCCCAGTTTCAGGATGATAGAATTTGCATATTAAGTGTTACAACAACAAAACTATaGACAACACACCTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PFPQMPQFQDDRICILSVTTTKL*TTHLAR
Trigger: CCTGGCTAGGTGTGTTGTCCATAGTTTTGTTGTTGT...AACACTTAATATGCAAATTCTATCATCCTGAAACTGGGGCATCTGAGGAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp GAGCGCACGGCTCAGGGACGTCCCTTCAGTGAGCAATGGAAGGACTGGCTGGAGAGAAGCACCTCCCTTTaGGCCCCTGTACTCCCCGTT +
Preference number: 5 (lower is better)
Translates to: ERTAQGRPFSEQWKDWLERSTSL*APVLPV
Trigger: AACGGGGAGTACAGGGGCCAAAAGGGAGGTGCTTCT...CTCCAGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCCTGAGCCGTGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS GCA 90 bp CCGAGGAGCAGAGCAGCCTACCCTTTCAGGGCCAGCGGGCACTTCTaGTTGCTTCACTTGAGAAGTCTGCCCCTGTTCCCTCAAGGATTT +
Preference number: 5 (lower is better)
Translates to: PRSRAAYPFRASGHF*LLHLRSLPLFPQGF
Trigger: AAATCCTTGAGGGAACAGGGGCAGACTTCTCAAGTGAAGCAAGCAGAAGTGCCCGCTGGCCCTGAAAGGGTAGGCTGCTCTGCTCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459714.1
CDS-3UTR CAA 90 bp CGGCTCAGGGACGTCCCTTCAGTGAGCAATGGAAGGACTGGCTGGAGGCCTCCCTTCATTCTTCGAGCATaGTGGACCACAAGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: RLRDVPSVSNGRTGWRPPFILRA*WTTSFS
Trigger: AGAGAAGCTTGTGGTCCACAATGCTCGAAGAATGAA...GGGAGGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCCTGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp CGGCTCAGGGACGTCCCTTCAGTGAGCAATGGAAGGACTGGCTGGAGGCCTCCCACAATCAGCACACATTaGCTCATACACATACCAGGT +
Preference number: 5 (lower is better)
Translates to: RLRDVPSVSNGRTGWRPPTISTH*LIHIPG
Trigger: ACCTGGTATGTGTATGAGCAAATGTGTGCTGATTGT...GGGAGGCCTCCAGCCAGTCCTTCCATTGCTCACTGAAGGGACGTCCCTGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS GCA 90 bp CTGCTTGCTTCACTTGAGAAGTCTGCCCCTGTTCCCTCAAGGATTTaGACCAGTGTTCCTTCAACAAGGCTCCAGGGGAGGCCAGTAAGG +
Preference number: 5 (lower is better)
Translates to: LLASLEKSAPVPSRI*TSVPSTRLQGRPVR
Trigger: CCTTACTGGCCTCCCCTGGAGCCTTGTTGAAGGAACACTGGTGCAAATCCTTGAGGGAACAGGGGCAGACTTCTCAAGTGAAGCAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459714.1
CDS-3UTR CAA 90 bp CACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATGTAAGACGGTGCTACTaGGAGGTTGCTATAGGACTC +
Preference number: 5 (lower is better)
Translates to: HGTLRTTREENNRTPKRHVRRCY*EVAIGL
Trigger: GAGTCCTATAGCAACCTCCAAGTAGCACCGTCTTAC...ATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp CTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCGTAAGACGGTGCTACTaGGAGGTTGCTATAGGACTC +
Preference number: 5 (lower is better)
Translates to: LRTTREENNRTPKRHLDSVRRCY*EVAIGL
Trigger: GAGTCCTATAGCAACCTCCAAGTAGCACCGTCTTAC...GCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp CAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGTTTCGAAAGCTTGAATaGTCCCCTGAGTGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: QQLWHVHVATVPFVQHGKFRKLE*SPECER
Trigger: TCTCTCACACTCAGGGGACAATTCAAGCTTTCGAAA...CTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CAA 90 bp ACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCGGCAATAACCAGCTTTaGCTTCCCTTCCTCAATGAG +
Preference number: 5 (lower is better)
Translates to: TVPFVQHGKRTTGRPRGIGNNQL*LPFLNE
Trigger: CTCATTGAGGAAGGGAAGCAAAAGCTGGTTATTGCC...GATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp CGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACACATTCTGGTTACGTaGGCCCTGGTAGACCTTTAT +
Preference number: 5 (lower is better)
Translates to: RTTREENNRTPKRHLDSTHILVT*ALVDLY
Trigger: ATAAAGGTCTACCAGGGCCAACGTAACCAGAATGTG...TGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp CTCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGCACATTCTGGTTACGTaGGCCCTGGTAGACCTTTAT +
Preference number: 5 (lower is better)
Translates to: LINSSGMYTWPRYPSYNTHILVT*ALVDLY
Trigger: ATAAAGGTCTACCAGGGCCAACGTAACCAGAATGTG...CGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp ATTCATAATACTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTGGCCACGAGAAGCACCTCCCTTTaGGCCCCTGTACTCCCCGTT +
Preference number: 5 (lower is better)
Translates to: IHNTGNSHQQLWHVHVATRSTSL*APVLPV
Trigger: AACGGGGAGTACAGGGGCCAAAAGGGAGGTGCTTCT...CGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTATTATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp ACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACACAGTTCATTCTTCGAGCATaGTGGACCACAAGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TTREENNRTPKRHLDSTQFILRA*WTTSFS
Trigger: AGAGAAGCTTGTGGTCCACAATGCTCGAAGAATGAA...CTGTGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp CGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACATTGTATTTCGAAAGCTaGAATTGTCCCCTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: RTTREENNRTPKRHLDSTLYFES*NCPLSV
Trigger: CACACTCAGGGGACAATTCAAGCTTTCGAAATACAA...TGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CAA 90 bp ACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTTGTATTTCGAAAGCTaGAATTGTCCCCTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: TVPFVQHGKRTTGRPRGILYFES*NCPLSV
Trigger: CACACTCAGGGGACAATTCAAGCTTTCGAAATACAA...GATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409514.5
ENST00000444113.1
CDS-3UTR CAA 90 bp ATCAACAGCTCTGGCATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAGCATTTACAGCTATTTaGGGACTCTCCAACAGAACA +
Preference number: 5 (lower is better)
Translates to: INSSGMYTWPRYPSYNTGAFTAI*GLSNRT
Trigger: TGTTCTGTTGGAGAGTCCCAAAATAGCTGTAAATGC...TCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACATGCCAGAGCTGTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp CTCCACTCTCCAGTGGCAACCTCACATTCTGGTACTGTGCAAAGCGGAGACCGAGCATTTACAGCTATTTaGGGACTCTCCAACAGAACA +
Preference number: 5 (lower is better)
Translates to: LHSPVATSHSGTVQSGDRAFTAI*GLSNRT
Trigger: TGTTCTGTTGGAGAGTCCCAAAATAGCTGTAAATGC...TCGGTCTCCGCTTTGCACAGTACCAGAATGTGAGGTTGCCACTGGAGAGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp CGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCACAACAATCAGCACACATTaGCTCATACACATACCAGGT +
Preference number: 5 (lower is better)
Translates to: RTTREENNRTPKRHLDSTTISTH*LIHIPG
Trigger: ACCTGGTATGTGTATGAGCAAATGTGTGCTGATTGT...TGTGCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp CTTCGTACAACACGGGAAGAGAACAACAGGACGCCCAAGAGGCATCTGGACAGCAGGGCCAGTATGTTTTaGATGGAAAAGACAACTGTC +
Preference number: 5 (lower is better)
Translates to: LRTTREENNRTPKRHLDSRASMF*MEKTTV
Trigger: GACAGTTGTCTTTTCCATCAAAAACATACTGGCCCT...GCTGTCCAGATGCCTCTTGGGCGTCCTGTTGTTCTCTTCCCGTGTTGTACGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp GAGCTTACTTCTGACACTCAATCACTGAGGAGCAAGCCTAACAGTGATTCTCACGCTCTCCCTCCAGCTTaGAGACAATCTGACAGCCAC +
Preference number: 5 (lower is better)
Translates to: ELTSDTQSLRSKPNSDSHALPPA*RQSDSH
Trigger: GTGGCTGTCAGATTGTCTCAAAGCTGGAGGGAGAGC...GTGAGAATCACTGTTAGGCTTGCTCCTCAGTGATTGAGTGTCAGAAGTAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR CAA 90 bp GAGCAATGGAAGGACTGGCTGGAGGCCTCCCATCCATTTCGGACAAACACACACTCTGACGCTATTTATTaGAATCCTAGGTGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: EQWKDWLEASHPFRTNTHSDAIY*NPRCSC
Trigger: ACAAGAGCACCTAGGATTCAAATAAATAGCGTCAGA...GTGTGTGTTTGTCCGAAATGGATGGGAGGCCTCCAGCCAGTCCTTCCATTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp ATGTACACGTGGCCACGGTACCCTTCGTACAACACGGGAAGAGAACAACAGGACAGGGCCAGTATGTTTTaGATGGAAAAGACAACTGTC +
Preference number: 5 (lower is better)
Translates to: MYTWPRYPSYNTGREQQDRASMF*MEKTTV
Trigger: GACAGTTGTCTTTTCCATCAAAAACATACTGGCCCT...GTCCTGTTGTTCTCTTCCCGTGTTGTACGAAGGGTACCGTGGCCACGTGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp CAGATGGGCTCTCTCTGCTACAAAGCACCTGGTAGTATAGGTGGCAGGGAGCCTAAGTTGCAAAGACACTaGTCAAAGGCACATATTGGT +
Preference number: 5 (lower is better)
Translates to: QMGSLCYKAPGSIGGREPKLQRH*SKAHIG
Trigger: ACCAATATGTGCCTTTGACAAGTGTCTTTGCAACTT...AGGCTCCCTGCCACCTATACTACCAGGTGCTTTGTAGCAGAGAGAGCCCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409167.7
CDS-3UTR CAA 90 bp AGATGCTGCCTAACAGGCATAACCCCTTGCTCTAACCAGCCTAGGGCCAGTATGTACAGAAAAGGATTATaGCCAGCTTGTGTACTCTCA +
Preference number: 5 (lower is better)
Translates to: RCCLTGITPCSNQPRASMYRKGL*PACVLS
Trigger: TGAGAGTACACAAGCTGGCAATAATCCTTTTCTGTA...CATACTGGCCCTAGGCTGGTTAGAGCAAGGGGTTATGCCTGTTAGGCAGCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS-3UTR CAA 90 bp ATAATACTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTGGCCACGGTACGGCAATAACCAGCTTTaGCTTCCCTTCCTCAATGAG +
Preference number: 5 (lower is better)
Translates to: IILVTLINSSGMYTWPRYGNNQL*LPFLNE
Trigger: CTCATTGAGGAAGGGAAGCAAAAGCTGGTTATTGCC...GTACCGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS GCA 90 bp CCAATTTACAGTGGCACTCCCTGTACTTTCTGCCTTGCCTATGTGTaGACAGGTGGTAGAAACAATTTTTCTTCATCAGGCCTCACTGAG +
Preference number: 5 (lower is better)
Translates to: PIYSGTPCTFCLAYV*TGGRNNFSSSGLTE
Trigger: CTCAGTGAGGCCTGATGAAGAAAAATTGTTTCTACCACCTGTGCACACATAGGCAAGGCAGAAAGTACAGGGAGTGCCACTGTAAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459714.1
CDS TCA 90 bp GTATCTTATCTCAGCATATGCCCAGTCCAAGCACTGCCTCCTCTATaGGATTCATCACTGTCAAGTTACTTAACCTGTTTGTGCCTCATC +
Preference number: 5 (lower is better)
Translates to: VSYLSICPVQALPPL*DSSLSSYLTCLCLI
Trigger: GATGAGGCACAAACAGGTTAAGTAACTTGACAGTGATGAATCTCATAGAGGAGGCAGTGCTTGGACTGGGCATATGCTGAGATAAGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479834.1
CDS-3UTR CAA 90 bp ATTCATAATACTGGTAACTCTCATCAACAGCTCTGGCATGTACACGTGGCCACGTCTGACGCTATTTATTaGAATCCTAGGTGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: IHNTGNSHQQLWHVHVATSDAIY*NPRCSC
Trigger: ACAAGAGCACCTAGGATTCAAATAAATAGCGTCAGA...CGTGGCCACGTGTACATGCCAGAGCTGTTGATGAGAGTTACCAGTATTATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409098.5
ENST00000409514.5
CDS TCA 90 bp TCATCAGGCCTCACTGAGGGTAAAGGCCAGTTTCCAACAGCATTATaGTGTCTAAAGATGCAAGGAGGAAAGTATACACTTTCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SSGLTEGKGQFPTAL*CLKMQGGKYTLSLF
Trigger: AAACAGAGAAAGTGTATACTTTCCTCCTTGCATCTTTAGACATCATAATGCTGTTGGAAACTGGCCTTTACCCTCAGTGAGGCCTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459714.1
CDS GCA 90 bp TCACCAAAAACACTTCCAATTTACAGTGGCACTCCCTGTACTTTCTaGCTTGCCTATGTGTGCACAGGTGGTAGAAACAATTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SPKTLPIYSGTPCTF*LAYVCTGGRNNFSS
Trigger: TGAAGAAAAATTGTTTCTACCACCTGTGCACACATAGGCAAGGCAGAAAGTACAGGGAGTGCCACTGTAAATTGGAAGTGTTTTTGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000459714.1
CDS TCA 90 bp CACATACAGAAAAGGATTATTGCCAGCTTGTGTACTCTCACAATGTaGTTTTTGTATTTCGAAAGCTTGAATTGTCCCTGGGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: HIQKRIIASLCTLTM*FLYFESLNCPWEQS
Trigger: GCTCTGCTCCCAGGGACAATTCAAGCTTTCGAAATACAAAAATCACATTGTGAGAGTACACAAGCTGGCAATAATCCTTTTCTGTATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459714.1
CDS-3UTR CAA 90 bp CCTTTTCCTCAGATGCCCCAGTTTCAGGATGATAGAATTTGCATATTAAGTGTTTTTCGAAAGCTTGAATaGTCCTTGATGCTGTCGGTG +
Preference number: 5 (lower is better)
Translates to: PFPQMPQFQDDRICILSVFRKLE*SLMLSV
Trigger: CACCGACAGCATCAAGGACAATTCAAGCTTTCGAAA...AACACTTAATATGCAAATTCTATCATCCTGAAACTGGGGCATCTGAGGAAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409098.5
CDS-3UTR CAA 90 bp TTTGTCTATTACAAAGTCACGTTTTCCGTTTTTCCGCTTTATAAAGTCAGCGATTTTCGAAAGCTTGAATaGTCCCCTGAGTGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: FVYYKVTFSVFPLYKVSDFRKLE*SPECER
Trigger: TCTCTCACACTCAGGGGACAATTCAAGCTTTCGAAA...ATCGCTGACTTTATAAAGCGGAAAAACGGAAAACGTGACTTTGTAATAGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409514.5
CDS GCA 72 bp GGAGTGTGTGGGGAAAGCTGGATTCAGAGGCAGCGCTaGCAGACTGCGGAAACACCCAAACCGCCGAGGTCC +
Preference number: 6 (lower is better)
Translates to: GVCGESWIQRQR*QTAETPKPPRS
Trigger: GGACCTCGGCGGTTTGGGTGTTTCCGCAGTCTGGCAGCGCTGCCTCTGAATCCAGCTTTCCCCACACACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454501.1
ENST00000479834.1
CDS CAA 90 bp AGGAGCAGAGCAGCCTACCCTTTCAGGGCCAGCGGGCACTTCTGCTaGCTTCACTTGAGAAGTCTGCCCCTGTTCCCTCAAGGATTTGCA +
Preference number: 6 (lower is better)
Translates to: RSRAAYPFRASGHFC*LHLRSLPLFPQGFA
Trigger: TGCAAATCCTTGAGGGAACAGGGGCAGACTTCTCAAGTGAAGCAAGCAGAAGTGCCCGCTGGCCCTGAAAGGGTAGGCTGCTCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459714.1
CDS TCA 72 bp CTTTCAGGGCCAGCGGGCACTTCTGCTTGCTTCACTTaGGAAGTCTGCCCCTGTTCCCTCAAGGATTTGCAC +
Preference number: 6 (lower is better)
Translates to: LSGPAGTSACFT*EVCPCSLKDLH
Trigger: GTGCAAATCCTTGAGGGAACAGGGGCAGACTTCTCAAGTGAAGCAAGCAGAAGTGCCCGCTGGCCCTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459714.1
CDS CAA 72 bp CCTTTCAGGGCCAGCGGGCACTTCTGCTTGCTTCACTaGAGAAGTCTGCCCCTGTTCCCTCAAGGATTTGCA +
Preference number: 6 (lower is better)
Translates to: PFRASGHFCLLH*RSLPLFPQGFA
Trigger: TGCAAATCCTTGAGGGAACAGGGGCAGACTTCTCAAGTGAAGCAAGCAGAAGTGCCCGCTGGCCCTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459714.1
CDS GCA 72 bp TCACTTGAGAAGTCTGCCCCTGTTCCCTCAAGGATTTaGACCAGTGTTCCTTCAACAAGGCTCCAGGGGAGG +
Preference number: 6 (lower is better)
Translates to: SLEKSAPVPSRI*TSVPSTRLQGR
Trigger: CCTCCCCTGGAGCCTTGTTGAAGGAACACTGGTGCAAATCCTTGAGGGAACAGGGGCAGACTTCTCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459714.1
CDS TCA 72 bp CTCAGCATATGCCCAGTCCAAGCACTGCCTCCTCTATaGGATTCATCACTGTCAAGTTACTTAACCTGTTTG +
Preference number: 6 (lower is better)
Translates to: LSICPVQALPPL*DSSLSSYLTCL
Trigger: CAAACAGGTTAAGTAACTTGACAGTGATGAATCTCATAGAGGAGGCAGTGCTTGGACTGGGCATATGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479834.1
CDS CCA 72 bp TGCTCAACTGTCACCAAAAACACTTCCAATTTACAGTaGCACTCCCTGTACTTTCTGCCTTGCCTATGTGTG +
Preference number: 6 (lower is better)
Translates to: CSTVTKNTSNLQ*HSLYFLPCLCV
Trigger: CACACATAGGCAAGGCAGAAAGTACAGGGAGTGCCACTGTAAATTGGAAGTGTTTTTGGTGACAGTTGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459714.1
CDS GCA 72 bp TTGTATCTTATCTCAGCATATGCCCAGTCCAAGCACTaGCTCCTCTATGAGATTCATCACTGTCAAGTTACT +
Preference number: 6 (lower is better)
Translates to: LYLISAYAQSKH*LLYEIHHCQVT
Trigger: AGTAACTTGACAGTGATGAATCTCATAGAGGAGGCAGTGCTTGGACTGGGCATATGCTGAGATAAGATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479834.1
CDS CAA 90 bp CAAAAACACTTCCAATTTACAGTGGCACTCCCTGTACTTTCTGCCTaGCCTATGTGTGCACAGGTGGTAGAAACAATTTTTCTTCATCAG +
Preference number: 6 (lower is better)
Translates to: QKHFQFTVALPVLSA*PMCAQVVETIFLHQ
Trigger: CTGATGAAGAAAAATTGTTTCTACCACCTGTGCACACATAGGCAAGGCAGAAAGTACAGGGAGTGCCACTGTAAATTGGAAGTGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000459714.1
CDS TCA 72 bp CTCACTGAGGGTAAAGGCCAGTTTCCAACAGCATTATaGTGTCTAAAGATGCAAGGAGGAAAGTATACACTT +
Preference number: 6 (lower is better)
Translates to: LTEGKGQFPTAL*CLKMQGGKYTL
Trigger: AAGTGTATACTTTCCTCCTTGCATCTTTAGACATCATAATGCTGTTGGAAACTGGCCTTTACCCTCAGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459714.1