Pregenerated sensors for EIF4E (Homo sapiens)
Ensembl gene IDs: ENSG00000151247Ensembl transcript IDs: ENST00000280892.10, ENST00000450253.7, ENST00000504472.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTGCTACCTACAGTTTGGCTTATCCTTTGGTCTGATAGCCATACTTCATCTCACCTACCAATCAAATGGTaGTGCATCAGATCCCAATTC | + |
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Preference number: 2 (lower is better) Translates to: LLPTVWLILWSDSHTSSHLPIKW*CIRSQF Trigger: GAATTGGGATCTGATGCATCACCATTTGATTGGTAG...GTGAGATGAAGTATGGCTATCAGACCAAAGGATAAGCCAAACTGTAGGTAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450253.7 |
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| 3UTR-3UTR GCA 90 bp | CTGCTACCTACAGTTTGGCTTATCCTTTGGTCTGATAGCCATACTTCATCTCACTTTTACAACCACTGTTaGTACCAATCAAATGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: LLPTVWLILWSDSHTSSHFYNHC*YQSNGD Trigger: ATCACCATTTGATTGGTAGCAACAGTGGTTGTAAAA...GTGAGATGAAGTATGGCTATCAGACCAAAGGATAAGCCAAACTGTAGGTAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450253.7 |
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| 3UTR CCA 72 bp | ATTTCCATTCTGCTACCTACAGTTTGGCTTATCCTTTaGTCTGATAGCCATACTTCATCTCACAGGACTATA | + |
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Preference number: 3 (lower is better) Translates to: ISILLPTVWLIL*SDSHTSSHRTI Trigger: TATAGTCCTGTGAGATGAAGTATGGCTATCAGACCAAAGGATAAGCCAAACTGTAGGTAGCAGAATGGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450253.7 |
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| CDS-3UTR TCA 90 bp | GCAACCAAGTTTTACAACCACTGTTGCTACCAATCAAATGGTGATGCATCAGATCTACCAATCAAATGGTaGTGCATCAGATCCCAATTC | + |
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Preference number: 4 (lower is better) Translates to: ATKFYNHCCYQSNGDASDLPIKW*CIRSQF Trigger: GAATTGGGATCTGATGCATCACCATTTGATTGGTAG...ATCTGATGCATCACCATTTGATTGGTAGCAACAGTGGTTGTAAAACTTGGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450253.7 |
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| CDS-3UTR CCA 90 bp | TCCATTCTGCTACCTACAGTTTGGCTTATCCTTTGGTCTGATAGCCATACTTCAGTTTGGCTTATCCTTTaGTCTGATAGCCATACTTCA | + |
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Preference number: 4 (lower is better) Translates to: SILLPTVWLILWSDSHTSVWLIL*SDSHTS Trigger: TGAAGTATGGCTATCAGACCAAAGGATAAGCCAAAC...TGAAGTATGGCTATCAGACCAAAGGATAAGCCAAACTGTAGGTAGCAGAATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450253.7 |
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| CDS-3UTR CCA 90 bp | TTAGATTGCAACACTAACAAGATTCTTAATGCATATGTCCCCACCACCTGTACTCTGCTACCTACAGTTTaGCTTATCCTTTGGTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LDCNTNKILNAYVPTTCTLLPTV*LILWSD Trigger: ATCAGACCAAAGGATAAGCCAAACTGTAGGTAGCAG...AGTACAGGTGGTGGGGACATATGCATTAAGAATCTTGTTAGTGTTGCAATCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450253.7 |
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| CDS-3UTR GCA 90 bp | ATATGTCCCCACCACCTGTACTTTCCCTACACTATCATTTTGACACTTAACATATTTTACAACCACTGTTaGTACCAATCAAATGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: ICPHHLYFPYTIILTLNIFYNHC*YQSNGD Trigger: ATCACCATTTGATTGGTAGCAACAGTGGTTGTAAAA...TATGTTAAGTGTCAAAATGATAGTGTAGGGAAAGTACAGGTGGTGGGGACATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000450253.7 |
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| CDS CCA 90 bp | AAATGTGACACAGAGACACCAAGTGAGCACATGCCATTGGAAACATaGCATCAACAGAACTGCTTGACACAGGATTTCCACAAACCTTCA | + |
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Preference number: 5 (lower is better) Translates to: KCDTETPSEHMPLET*HQQNCLTQDFHKPS Trigger: TGAAGGTTTGTGGAAATCCTGTGTCAAGCAGTTCTGTTGATGCCATGTTTCCAATGGCATGTGCTCACTTGGTGTCTCTGTGTCACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504472.1 |
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| CDS GCA 90 bp | ACACCAAGTGAGCACATGCCATTGGAAACATGGCATCAACAGAACTaGTTGACACAGGATTTCCACAAACCTTCAATTTATAGAAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: TPSEHMPLETWHQQN*LTQDFHKPSIYRKG Trigger: GCCTTTTCTATAAATTGAAGGTTTGTGGAAATCCTGTGTCAAGCAGTTCTGTTGATGCCATGTTTCCAATGGCATGTGCTCACTTGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504472.1 |
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| CDS CAA 72 bp | ACACGCCGCCTCGGCCATCCTCCGGGACGTCCCCACTaGTCCGCGGGAGGTCAGGTCCAACATGAAGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: TRRLGHPPGRPH*SAGGQVQHEGE Trigger: TTCCCCTTCATGTTGGACCTGACCTCCCGCGGACAAGTGGGGACGTCCCGGAGGATGGCCGAGGCGGCGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280892.10 |
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| CDS CCA 72 bp | ACAGAGACACCAAGTGAGCACATGCCATTGGAAACATaGCATCAACAGAACTGCTTGACACAGGATTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: TETPSEHMPLET*HQQNCLTQDFH Trigger: GTGGAAATCCTGTGTCAAGCAGTTCTGTTGATGCCATGTTTCCAATGGCATGTGCTCACTTGGTGTCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504472.1 |
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| CDS CAA 72 bp | AAATGTGACACAGAGACACCAAGTGAGCACATGCCATaGGAAACATGGCATCAACAGAACTGCTTGACACAG | + |
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Preference number: 6 (lower is better) Translates to: KCDTETPSEHMP*ETWHQQNCLTQ Trigger: CTGTGTCAAGCAGTTCTGTTGATGCCATGTTTCCAATGGCATGTGCTCACTTGGTGTCTCTGTGTCACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504472.1 |
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| CDS TCA 72 bp | ACATGCCATTGGAAACATGGCATCAACAGAACTGCTTaGCACAGGATTTCCACAAACCTTCAATTTATAGAA | + |
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Preference number: 6 (lower is better) Translates to: TCHWKHGINRTA*HRISTNLQFIE Trigger: TTCTATAAATTGAAGGTTTGTGGAAATCCTGTGTCAAGCAGTTCTGTTGATGCCATGTTTCCAATGGCATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504472.1 |
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