Pregenerated sensors for EIF4A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000161960Ensembl transcript IDs: ENST00000577731.1, ENST00000577738.5, ENST00000577929.1, ENST00000578476.5, ENST00000579085.5, ENST00000579139.1, ENST00000580461.5, ENST00000580886.5, ENST00000581544.5, ENST00000581770.5, ENST00000582848.5, ENST00000583899.5, ENST00000584054.5, ENST00000584798.1, ENST00000584860.5, ENST00000584901.5
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGCTGGAAGAGAAAACAAATATGCAGCAGACCAGGTAGGCACCTaGGTTCCAGGAACCCTGGCTTCAAGTAGGACACTTCTGACGGGC | + |
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Preference number: 1 (lower is better) Translates to: HAGRENKYAADQVGT*VPGTLASSRTLLTG Trigger: GCCCGTCAGAAGTGTCCTACTTGAAGCCAGGGTTCCTGGAACCCAGGTGCCTACCTGGTCTGCTGCATATTTGTTTTCTCTTCCAGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581544.5 |
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| 3UTR CCA 90 bp | TGTCTTCCTCCCAAGGTGGTGATCAGAGAAGACTTCTCTGGTCCTTaGATTATACTCATCATCCCTAAATCAGCCCTGAAGGAGGGAATA | + |
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Preference number: 1 (lower is better) Translates to: CLPPKVVIREDFSGP*IILIIPKSALKEGI Trigger: TATTCCCTCCTTCAGGGCTGATTTAGGGATGATGAGTATAATCCAAGGACCAGAGAAGTCTTCTCTGATCACCACCTTGGGAGGAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| 3UTR CAA 90 bp | TCAAACTTGCCCAGCCAGCCAGGCTTCACCCAACAGCTTTCCCATTaGACTCAGGAAATGGGTGGAGGAAGCAATGGTTACGTTTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: SNLPSQPGFTQQLSH*TQEMGGGSNGYVWV Trigger: TACCCAAACGTAACCATTGCTTCCTCCACCCATTTCCTGAGTCAAATGGGAAAGCTGTTGGGTGAAGCCTGGCTGGCTGGGCAAGTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| 3UTR-3UTR CCA 90 bp | CTTATTCAGAACACAGTCAAACTTGCCCAGCCAGCCAGGCTTCACCCAACAGCTGACTCAGGAAATGGGTaGAGGAAGCAATGGTTACGT | + |
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Preference number: 2 (lower is better) Translates to: LIQNTVKLAQPARLHPTADSGNG*RKQWLR Trigger: ACGTAACCATTGCTTCCTCCACCCATTTCCTGAGTC...AGCTGTTGGGTGAAGCCTGGCTGGCTGGGCAAGTTTGACTGTGTTCTGAATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| 3UTR-3UTR GCA 90 bp | TTAAGCAAGGGTGAAAAGGACTGTCCATCTGCTCTGACTACTGTAAGATCACCCGAACACAGTCAAACTTaGCCAGCCAGCCAGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LSKGEKDCPSALTTVRSPEHSQT*PASQAS Trigger: TGAAGCCTGGCTGGCTGGGCAAGTTTGACTGTGTTC...GGGTGATCTTACAGTAGTCAGAGCAGATGGACAGTCCTTTTCACCCTTGCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| 3UTR-3UTR CCA 90 bp | CTTATTCAGAACACAGTCAAACTTGCCCAGCCAGCCAGGCTTCACCCAACAGCTGGGTGGAGGAAGCAATaGTTACGTTTGGGTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LIQNTVKLAQPARLHPTAGWRKQ*LRLGKK Trigger: TTTCTTACCCAAACGTAACCATTGCTTCCTCCACCC...AGCTGTTGGGTGAAGCCTGGCTGGCTGGGCAAGTTTGACTGTGTTCTGAATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| 3UTR-3UTR TCA 90 bp | TTAAGCAAGGGTGAAAAGGACTGTCCATCTGCTCTGACTACTGTAAGATCACCCTTCCTCCCAAGGTGGTaGTCAGAGAAGACTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LSKGEKDCPSALTTVRSPFLPRW*SEKTSL Trigger: CAGAGAAGTCTTCTCTGATCACCACCTTGGGAGGAA...GGGTGATCTTACAGTAGTCAGAGCAGATGGACAGTCCTTTTCACCCTTGCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| 3UTR-3UTR CCA 90 bp | TTCACCCAACAGCTTTCCCATTTGACTCAGGAAATGGGTGGAGGAAGCAATGGTGACTTCTCTGGTCCTTaGATTATACTCATCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: FTQQLSHLTQEMGGGSNGDFSGP*IILIIP Trigger: AGGGATGATGAGTATAATCCAAGGACCAGAGAAGTC...ACCATTGCTTCCTCCACCCATTTCCTGAGTCAAATGGGAAAGCTGTTGGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| 3UTR-3UTR CCA 90 bp | TTAAGCAAGGGTGAAAAGGACTGTCCATCTGCTCTGACTACTGTAAGATCACCCCAGAGAAGACTTCTCTaGTCCTTGGATTATACTCAT | + |
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Preference number: 2 (lower is better) Translates to: LSKGEKDCPSALTTVRSPQRRLL*SLDYTH Trigger: ATGAGTATAATCCAAGGACCAGAGAAGTCTTCTCTG...GGGTGATCTTACAGTAGTCAGAGCAGATGGACAGTCCTTTTCACCCTTGCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| 3UTR TCA 72 bp | GGGTTCCAGGAACCCTGGCTTCAAGTAGGACACTTCTaGCGGGCAGACCCACAACAGGCTGGCAGCGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: GFQEPWLQVGHF*RADPQQAGSGQ Trigger: TTGCCCGCTGCCAGCCTGTTGTGGGTCTGCCCGTCAGAAGTGTCCTACTTGAAGCCAGGGTTCCTGGAACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581544.5 |
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| 3UTR GCA 72 bp | GGAGAGGGAATCACCTTGGATCCTCCCTTCTGCCTTTaGTATCAGTTCCCTCTACTCACCAGCAGGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: GEGITLDPPFCL*YQFPLLTSRSV Trigger: CACTGACCTGCTGGTGAGTAGAGGGAACTGATAGCAAAGGCAGAAGGGAGGATCCAAGGTGATTCCCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581544.5 |
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| 3UTR GCA 72 bp | CATAGTGAAGGTGCTTATTCAGAACACAGTCAAACTTaGCCAGCCAGCCAGGCTTCACCCAACAGCTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: HSEGAYSEHSQT*PASQASPNSFP Trigger: GGGAAAGCTGTTGGGTGAAGCCTGGCTGGCTGGGCAAGTTTGACTGTGTTCTGAATAAGCACCTTCACTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| 3UTR TCA 72 bp | CCCAGGCATGAAACAGCTCTGGCTATTAAGCAAGGGTaGAAAGGACTGTCCATCTGCTCTGACTACTGTAAG | + |
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Preference number: 3 (lower is better) Translates to: PRHETALAIKQG*KGLSICSDYCK Trigger: CTTACAGTAGTCAGAGCAGATGGACAGTCCTTTTCACCCTTGCTTAATAGCCAGAGCTGTTTCATGCCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| 3UTR CCA 72 bp | CCCAAGGTGGTGATCAGAGAAGACTTCTCTGGTCCTTaGATTATACTCATCATCCCTAAATCAGCCCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: PKVVIREDFSGP*IILIIPKSALK Trigger: CTTCAGGGCTGATTTAGGGATGATGAGTATAATCCAAGGACCAGAGAAGTCTTCTCTGATCACCACCTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR GCA 90 bp | ATCAGCCCTGAAGGAGGGAATAGAAGCCACTCTTACCTGCTGAGCCAATTCTCGCGGGTGGGCTCCTGGTaGCTCACGCGGCCGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: ISPEGGNRSHSYLLSQFSRVGSW*LTRPLL Trigger: GAGGAGCGGCCGCGTGAGGCACCAGGAGCCCACCCG...CGAGAATTGGCTCAGCAGGTAAGAGTGGCTTCTATTCCCTCCTTCAGGGCTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000579139.1 ENST00000580461.5 |
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| CDS-3UTR GCA 90 bp | GTGAAGGTGCTTATTCAGAACACAGTCAAACTTGCCCAGCCAGCCAGGCTTCACCGGGTGGGCTCCTGGTaGCTCACGCGGCCGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VKVLIQNTVKLAQPARLHRVGSW*LTRPLL Trigger: GAGGAGCGGCCGCGTGAGGCACCAGGAGCCCACCCG...GTGAAGCCTGGCTGGCTGGGCAAGTTTGACTGTGTTCTGAATAAGCACCTTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR CCA 90 bp | ATCAGCCCTGAAGGAGGGAATAGAAGCCACTCTTACCTGCTGAGCCAATTCTCGGCTTGTGCGGCAAAATaGACCCGCCCGCCCGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: ISPEGGNRSHSYLLSQFSACAAK*TRPPGA Trigger: GGCGCCGGGCGGGCGGGTCCATTTTGCCGCACAAGC...CGAGAATTGGCTCAGCAGGTAAGAGTGGCTTCTATTCCCTCCTTCAGGGCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000579139.1 ENST00000580461.5 |
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| CDS-3UTR CCA 90 bp | TTAAGCAAGGGTGAAAAGGACTGTCCATCTGCTCTGACTACTGTAAGATCACCCGCTTGTGCGGCAAAATaGACCCGCCCGCCCGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LSKGEKDCPSALTTVRSPACAAK*TRPPGA Trigger: GGCGCCGGGCGGGCGGGTCCATTTTGCCGCACAAGC...GGGTGATCTTACAGTAGTCAGAGCAGATGGACAGTCCTTTTCACCCTTGCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR CCA 90 bp | CTTGCCCAGCCAGCCAGGCTTCACCCAACAGCTTTCCCATTTGACTCAGGAAATACCCCCGAAGGAAGGTaGACCTGCCCATCCGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: LAQPARLHPTAFPFDSGNTPEGR*TCPSAV Trigger: AACTGCGGATGGGCAGGTCCACCTTCCTTCGGGGGT...ATTTCCTGAGTCAAATGGGAAAGCTGTTGGGTGAAGCCTGGCTGGCTGGGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR CCA 90 bp | AGCCCTGAAGGAGGGAATAGAAGCCACTCTTACCTGCTGAGCCAATTCTCGAGTCGGGGCCATTGTCTCTaGATCTCAGGCCGCTCACCC | + |
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Preference number: 4 (lower is better) Translates to: SPEGGNRSHSYLLSQFSSRGHCL*ISGRSP Trigger: GGGTGAGCGGCCTGAGATCCAGAGACAATGGCCCCG...ACTCGAGAATTGGCTCAGCAGGTAAGAGTGGCTTCTATTCCCTCCTTCAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000579139.1 ENST00000580461.5 |
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| CDS-3UTR CCA 90 bp | AGCCCTGAAGGAGGGAATAGAAGCCACTCTTACCTGCTGAGCCAATTCTCGAGTACCCCCGAAGGAAGGTaGACCTGCCCATCCGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: SPEGGNRSHSYLLSQFSSTPEGR*TCPSAV Trigger: AACTGCGGATGGGCAGGTCCACCTTCCTTCGGGGGT...ACTCGAGAATTGGCTCAGCAGGTAAGAGTGGCTTCTATTCCCTCCTTCAGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000579139.1 ENST00000580461.5 |
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| 3UTR CAA 72 bp | CCCAGCCAGCCAGGCTTCACCCAACAGCTTTCCCATTaGACTCAGGAAATGGGTGGAGGAAGCAATGGTTAC | + |
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Preference number: 4 (lower is better) Translates to: PSQPGFTQQLSH*TQEMGGGSNGY Trigger: GTAACCATTGCTTCCTCCACCCATTTCCTGAGTCAAATGGGAAAGCTGTTGGGTGAAGCCTGGCTGGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR GCA 90 bp | AGCCCTGAAGGAGGGAATAGAAGCCACTCTTACCTGCTGAGCCAATTCTCGAGTGAAGGAAGGTGGACCTaGCCATCCGCAGTTTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SPEGGNRSHSYLLSQFSSEGRWT*PSAVCQ Trigger: TTGGCAAACTGCGGATGGGCAGGTCCACCTTCCTTC...ACTCGAGAATTGGCTCAGCAGGTAAGAGTGGCTTCTATTCCCTCCTTCAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000579139.1 ENST00000580461.5 |
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| CDS-3UTR GCA 90 bp | TTCAGAACACAGTCAAACTTGCCCAGCCAGCCAGGCTTCACCCAACAGCTTTCCGAACACAGTCAAACTTaGCCAGCCAGCCAGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FRTQSNLPSQPGFTQQLSEHSQT*PASQAS Trigger: TGAAGCCTGGCTGGCTGGGCAAGTTTGACTGTGTTC...GGAAAGCTGTTGGGTGAAGCCTGGCTGGCTGGGCAAGTTTGACTGTGTTCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR TCA 90 bp | TTCAGAACACAGTCAAACTTGCCCAGCCAGCCAGGCTTCACCCAACAGCTTTCCGCTATTAAGCAAGGGTaGAAAGGACTGTCCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: FRTQSNLPSQPGFTQQLSAIKQG*KGLSIC Trigger: GCAGATGGACAGTCCTTTTCACCCTTGCTTAATAGC...GGAAAGCTGTTGGGTGAAGCCTGGCTGGCTGGGCAAGTTTGACTGTGTTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR CCA 90 bp | GCCCATAGTGAAGGTGCTTATTCAGAACACAGTCAAACTTGCCCAGCCAGCCAGGACTCAGGAAATGGGTaGAGGAAGCAATGGTTACGT | + |
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Preference number: 4 (lower is better) Translates to: AHSEGAYSEHSQTCPASQDSGNG*RKQWLR Trigger: ACGTAACCATTGCTTCCTCCACCCATTTCCTGAGTC...CTGGCTGGCTGGGCAAGTTTGACTGTGTTCTGAATAAGCACCTTCACTATGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR TCA 90 bp | TTCACCCAACAGCTTTCCCATTTGACTCAGGAAATGGGTGGAGGAAGCAATGGTTTCCTCCCAAGGTGGTaGTCAGAGAAGACTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: FTQQLSHLTQEMGGGSNGFLPRW*SEKTSL Trigger: CAGAGAAGTCTTCTCTGATCACCACCTTGGGAGGAA...ACCATTGCTTCCTCCACCCATTTCCTGAGTCAAATGGGAAAGCTGTTGGGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR GCA 90 bp | CCATTTGACTCAGGAAATGGGTGGAGGAAGCAATGGTTACGTTTGGGTAAGAAAGAAGGAAGGTGGACCTaGCCATCCGCAGTTTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: PFDSGNGWRKQWLRLGKKEGRWT*PSAVCQ Trigger: TTGGCAAACTGCGGATGGGCAGGTCCACCTTCCTTC...TTTCTTACCCAAACGTAACCATTGCTTCCTCCACCCATTTCCTGAGTCAAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR CCA 90 bp | ATCAGCCCTGAAGGAGGGAATAGAAGCCACTCTTACCTGCTGAGCCAATTCTCGGGGTGGAGGAAGCAATaGTTACGTTTGGGTAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: ISPEGGNRSHSYLLSQFSGWRKQ*LRLGKK Trigger: TTTCTTACCCAAACGTAACCATTGCTTCCTCCACCC...CGAGAATTGGCTCAGCAGGTAAGAGTGGCTTCTATTCCCTCCTTCAGGGCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR CCA 90 bp | CTTATTCAGAACACAGTCAAACTTGCCCAGCCAGCCAGGCTTCACCCAACAGCTCAGAGAAGACTTCTCTaGTCCTTGGATTATACTCAT | + |
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Preference number: 4 (lower is better) Translates to: LIQNTVKLAQPARLHPTAQRRLL*SLDYTH Trigger: ATGAGTATAATCCAAGGACCAGAGAAGTCTTCTCTG...AGCTGTTGGGTGAAGCCTGGCTGGCTGGGCAAGTTTGACTGTGTTCTGAATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR GCA 90 bp | TTCACCCAACAGCTTTCCCATTTGACTCAGGAAATGGGTGGAGGAAGCAATGGTAAAGGACTGTCCATCTaGTCTGACTACTGTAAGATC | + |
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Preference number: 4 (lower is better) Translates to: FTQQLSHLTQEMGGGSNGKGLSI*SDYCKI Trigger: GATCTTACAGTAGTCAGAGCAGATGGACAGTCCTTT...ACCATTGCTTCCTCCACCCATTTCCTGAGTCAAATGGGAAAGCTGTTGGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS-3UTR CCA 90 bp | CCATTTGACTCAGGAAATGGGTGGAGGAAGCAATGGTTACGTTTGGGTAAGAAAGACTTCTCTGGTCCTTaGATTATACTCATCATCCCT | + |
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Preference number: 4 (lower is better) Translates to: PFDSGNGWRKQWLRLGKKDFSGP*IILIIP Trigger: AGGGATGATGAGTATAATCCAAGGACCAGAGAAGTC...TTTCTTACCCAAACGTAACCATTGCTTCCTCCACCCATTTCCTGAGTCAAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS GCA 90 bp | GCCGGCAGGCGTGCCGCCGCGCTCACGGTGCCCAGAGGTGGTGCTTaGCGCCGGGTCCACGTGGGCCCGACCCAGCCGCTTAAAGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: AGRRAAALTVPRGGA*RRVHVGPTQPLKAQ Trigger: TTGGGCTTTAAGCGGCTGGGTCGGGCCCACGTGGACCCGGCGGCAAGCACCACCTCTGGGCACCGTGAGCGCGGCGGCACGCCTGCCGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS GCA 90 bp | TGCGGCAAAATGGACCCGCCCGCCCGGCGCCGGGTGGGCTCCTGGTaGCTCACGCGGCCGCTCCTCGGGGTTAGGCTCAGTCCTGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: CGKMDPPARRRVGSW*LTRPLLGVRLSPGR Trigger: ACGGCCAGGACTGAGCCTAACCCCGAGGAGCGGCCGCGTGAGGCACCAGGAGCCCACCCGGCGCCGGGCGGGCGGGTCCATTTTGCCGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000581770.5 ENST00000584860.5 |
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| CDS CCA 90 bp | AGCCCGGCTTGTGCGGCAAAATGGACCCGCCCGCCCGGCGCCGGGTaGGCTCCTGGTGCCTCACGCGGCCGCTCCTCGGGGTTAGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SPACAAKWTRPPGAG*APGASRGRSSGLGS Trigger: TGAGCCTAACCCCGAGGAGCGGCCGCGTGAGGCACCAGGAGCCCACCCGGCGCCGGGCGGGCGGGTCCATTTTGCCGCACAAGCCGGGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000578476.5 ENST00000579139.1 ENST00000580461.5 ENST00000581770.5 ENST00000584860.5 |
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| CDS GCA 90 bp | TGCGGCAAAATGGACCCGCCCGCCCGGCGCCGGGTGGGCTCCTGGTaGCTCACGCGGCCGCTCCTCGGGGTTAGGCTCAGTCCGGGAATC | + |
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Preference number: 5 (lower is better) Translates to: CGKMDPPARRRVGSW*LTRPLLGVRLSPGI Trigger: GATTCCCGGACTGAGCCTAACCCCGAGGAGCGGCCGCGTGAGGCACCAGGAGCCCACCCGGCGCCGGGCGGGCGGGTCCATTTTGCCGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000578476.5 ENST00000579139.1 ENST00000580461.5 |
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| CDS CCA 90 bp | TTGTGCGGCAAAATGGACCCGCCCGCCCGGCGCCGGGTGGGCTCCTaGTGCCTCACGCGGCCGCTCCTCGGGGTTAGGCTCAGTCCGGGA | + |
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Preference number: 5 (lower is better) Translates to: LCGKMDPPARRRVGS*CLTRPLLGVRLSPG Trigger: TCCCGGACTGAGCCTAACCCCGAGGAGCGGCCGCGTGAGGCACCAGGAGCCCACCCGGCGCCGGGCGGGCGGGTCCATTTTGCCGCACAA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000578476.5 ENST00000579139.1 ENST00000580461.5 |
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| CDS CCA 90 bp | TTGTGCGGCAAAATGGACCCGCCCGCCCGGCGCCGGGTGGGCTCCTaGTGCCTCACGCGGCCGCTCCTCGGGGTTAGGCTCAGTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: LCGKMDPPARRRVGS*CLTRPLLGVRLSPG Trigger: GCCAGGACTGAGCCTAACCCCGAGGAGCGGCCGCGTGAGGCACCAGGAGCCCACCCGGCGCCGGGCGGGCGGGTCCATTTTGCCGCACAA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000581770.5 ENST00000584860.5 |
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| CDS CCA 90 bp | CCGCGCTCACGGTGCCCAGAGGTGGTGCTTGCCGCCGGGTCCACGTaGGCCCGACCCAGCCGCTTAAAGCCCAAGCGCGTGCACCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: PRSRCPEVVLAAGST*ARPSRLKPKRVHLP Trigger: TGGGAGGTGCACGCGCTTGGGCTTTAAGCGGCTGGGTCGGGCCCACGTGGACCCGGCGGCAAGCACCACCTCTGGGCACCGTGAGCGCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS TCA 90 bp | CATGCAGGCAGCGGCTCAGGCCAGGCCACCCCCGACATAAGGGGGTaGCCCTTTCTGAAGACAGGCCGGCAGGCGTGCCGCCGCGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: HAGSGSGQATPDIRG*PFLKTGRQACRRAH Trigger: GTGAGCGCGGCGGCACGCCTGCCGGCCTGTCTTCAGAAAGGGTCACCCCCTTATGTCGGGGGTGGCCTGGCCTGAGCCGCTGCCTGCATG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS CCA 90 bp | CTTAAAGCCCAAGCGCGTGCACCTCCCACCGCAGCACCAGCGCGCTaGAAGTCCCGCCCTTCACCTCCCAGATCGGAGGGTAGGACATCC | + |
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Preference number: 5 (lower is better) Translates to: LKAQARAPPTAAPAR*KSRPSPPRSEGRTS Trigger: GGATGTCCTACCCTCCGATCTGGGAGGTGAAGGGCGGGACTTCCAGCGCGCTGGTGCTGCGGTGGGAGGTGCACGCGCTTGGGCTTTAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS TCA 90 bp | CACTCAGAAATCCTGACAGCCGGGCTCTGTCAGGAGTGGCCTGCATaGTGCCATCAATCTGCTGTCCCAGATCCAACTCCCACCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: HSEILTAGLCQEWPA*CHQSAVPDPTPTSS Trigger: GGAGCTGGTGGGAGTTGGATCTGGGACAGCAGATTGATGGCATCATGCAGGCCACTCCTGACAGAGCCCGGCTGTCAGGATTTCTGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS GCA 90 bp | GAAGCACTCAGAAATCCTGACAGCCGGGCTCTGTCAGGAGTGGCCTaGATGATGCCATCAATCTGCTGTCCCAGATCCAACTCCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: EALRNPDSRALSGVA*MMPSICCPRSNSHQ Trigger: CTGGTGGGAGTTGGATCTGGGACAGCAGATTGATGGCATCATGCAGGCCACTCCTGACAGAGCCCGGCTGTCAGGATTTCTGAGTGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS-3UTR CAA 90 bp | ATCAGCCCTGAAGGAGGGAATAGAAGCCACTCTTACCTGCTGAGCCAATTCTCGCTGCCCATCCGCAGTTaGCCAATAGCCCGGCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: ISPEGGNRSHSYLLSQFSLPIRS*PIARLV Trigger: CACAAGCCGGGCTATTGGCAAACTGCGGATGGGCAG...CGAGAATTGGCTCAGCAGGTAAGAGTGGCTTCTATTCCCTCCTTCAGGGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000579139.1 ENST00000580461.5 |
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| CDS TCA 90 bp | AAGCATAAGTTTTGTCCCCTGCCCGACCGAAGCACTCAGAAATCCTaGCAGCCGGGCTCTGTCAGGAGTGGCCTGCATGATGCCATCAAT | + |
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Preference number: 5 (lower is better) Translates to: KHKFCPLPDRSTQKS*QPGSVRSGLHDAIN Trigger: ATTGATGGCATCATGCAGGCCACTCCTGACAGAGCCCGGCTGTCAGGATTTCTGAGTGCTTCGGTCGGGCAGGGGACAAAACTTATGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS TCA 90 bp | CCCCAGAGAGAAACCAGCATCCTTGGGAATGACTCTGGCTTACGCTaGAAGACTGGAAAGCGTGCACAAGAGCAAAGTGACCCAGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: PQRETSILGNDSGLR*KTGKRAQEQSDPGD Trigger: ATCCCCTGGGTCACTTTGCTCTTGTGCACGCTTTCCAGTCTTTCAGCGTAAGCCAGAGTCATTCCCAAGGATGCTGGTTTCTCTCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584901.5 |
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| CDS TCA 90 bp | CACAGAGCAGCTCTTCCCCCAGAGAGAAACCAGCATCCTTGGGAATaGCTCTGGCTTACGCTGAAAGACTGGAAAGCGTGCACAAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: HRAALPPERNQHPWE*LWLTLKDWKACTRA Trigger: TGCTCTTGTGCACGCTTTCCAGTCTTTCAGCGTAAGCCAGAGTCATTCCCAAGGATGCTGGTTTCTCTCTGGGGGAAGAGCTGCTCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000584901.5 |
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| CDS TCA 90 bp | AAAAACAGAGAGGAGCCAAGTAGTCTGCTCTCAGAGTACAAAGACTaGTCCTTTGCCCAGGACCTTCCCGCCAGGCAGACAACAGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: KNREEPSSLLSEYKD*SFAQDLPARQTTAL Trigger: CAGGGCTGTTGTCTGCCTGGCGGGAAGGTCCTGGGCAAAGGATCAGTCTTTGTACTCTGAGAGCAGACTACTTGGCTCCTCTCTGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000584901.5 |
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| CDS-3UTR CAA 90 bp | TTCAGAACACAGTCAAACTTGCCCAGCCAGCCAGGCTTCACCCAACAGCTTTCCCAACAGCTTTCCCATTaGACTCAGGAAATGGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: FRTQSNLPSQPGFTQQLSQQLSH*TQEMGG Trigger: TCCACCCATTTCCTGAGTCAAATGGGAAAGCTGTTG...GGAAAGCTGTTGGGTGAAGCCTGGCTGGCTGGGCAAGTTTGACTGTGTTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580461.5 |
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| CDS CCA 90 bp | ATGGAAAAGGTGGAGCTGAGCTGTAGTCTCCGAGCAAACAGAATCTaGTGCCTACTAACAAAAGCCTCAGAGCTTACAACCCTCCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: MEKVELSCSLRANRI*CLLTKASELTTLLP Trigger: AGGGAGGAGGGTTGTAAGCTCTGAGGCTTTTGTTAGTAGGCACCAGATTCTGTTTGCTCGGAGACTACAGCTCAGCTCCACCTTTTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000580886.5 ENST00000583899.5 |
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| CDS GCA 90 bp | GAAAAGGTGGAGCTGAGCTGTAGTCTCCGAGCAAACAGAATCTGGTaGCTACTAACAAAAGCCTCAGAGCTTACAACCCTCCTCCCTTTA | + |
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Preference number: 5 (lower is better) Translates to: EKVELSCSLRANRIW*LLTKASELTTLLPL Trigger: TAAAGGGAGGAGGGTTGTAAGCTCTGAGGCTTTTGTTAGTAGGCACCAGATTCTGTTTGCTCGGAGACTACAGCTCAGCTCCACCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000580886.5 ENST00000583899.5 |
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| CDS GCA 90 bp | CCCAAGCTACGAGGCATGTTCACTCTGAGAAAACTGAGAGCCAAGTaGCTTAGAATGGAGCTCTGCTGTAACTTCTTACATTATCCACAC | + |
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Preference number: 5 (lower is better) Translates to: PKLRGMFTLRKLRAK*LRMELCCNFLHYPH Trigger: GTGTGGATAATGTAAGAAGTTACAGCAGAGCTCCATTCTAAGGCACTTGGCTCTCAGTTTTCTCAGAGTGAACATGCCTCGTAGCTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584798.1 |
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| CDS GCA 90 bp | AGTTTTATAGAACAGGTGATGCATATCCATGTCCTATTGCACTCCTaGCATAGGACCCAAGCTACGAGGCATGTTCACTCTGAGAAAACT | + |
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Preference number: 5 (lower is better) Translates to: SFIEQVMHIHVLLHS*HRTQATRHVHSEKT Trigger: AGTTTTCTCAGAGTGAACATGCCTCGTAGCTTGGGTCCTATGGCAGGAGTGCAATAGGACATGGATATGCATCACCTGTTCTATAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584798.1 |
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| CDS CCA 90 bp | ACACCAAGCTGGACTAGAAACATGGCTGTAGATGCAAATATAAGCTaGCTACAATACCACCTCTTTAAAGGAAACCTATGTGTCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: TPSWTRNMAVDANIS*LQYHLFKGNLCVQG Trigger: GCCTTGGACACATAGGTTTCCTTTAAAGAGGTGGTATTGTAGCCAGCTTATATTTGCATCTACAGCCATGTTTCTAGTCCAGCTTGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579085.5 ENST00000584054.5 ENST00000584798.1 |
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| CDS TCA 90 bp | TTGGGATATTCAAGTCCTAGGTTAATGAGGTCAATAAGCAACCAATaGACCAAGCATTTCATGGCTCACAAACTACCTTCCCAATCAACA | + |
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Preference number: 5 (lower is better) Translates to: LGYSSPRLMRSISNQ*TKHFMAHKLPSQST Trigger: TGTTGATTGGGAAGGTAGTTTGTGAGCCATGAAATGCTTGGTTCATTGGTTGCTTATTGACCTCATTAACCTAGGACTTGAATATCCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579085.5 ENST00000584054.5 ENST00000584798.1 |
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| CDS CCA 90 bp | TTTCATGGCTCACAAACTACCTTCCCAATCAACACAGTTACACAATaGGAACCAGATCAGAAACAAGGACCAGTTATTAACTCATCTAGT | + |
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Preference number: 5 (lower is better) Translates to: FHGSQTTFPINTVTQ*EPDQKQGPVINSSS Trigger: ACTAGATGAGTTAATAACTGGTCCTTGTTTCTGATCTGGTTCCCATTGTGTAACTGTGTTGATTGGGAAGGTAGTTTGTGAGCCATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579085.5 ENST00000584054.5 ENST00000584798.1 |
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| CDS GCA 72 bp | ATGGACCCGCCCGCCCGGCGCCGGGTGGGCTCCTGGTaGCTCACGCGGCCGCTCCTCGGGGTTAGGCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: MDPPARRRVGSW*LTRPLLGVRLS Trigger: ACTGAGCCTAACCCCGAGGAGCGGCCGCGTGAGGCACCAGGAGCCCACCCGGCGCCGGGCGGGCGGGTCCAT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000578476.5 ENST00000579139.1 ENST00000580461.5 ENST00000581770.5 ENST00000584860.5 |
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| CDS GCA 72 bp | GAAGACAGGCCGGCAGGCGTGCCGCCGCGCTCACGGTaGCCAGAGGTGGTGCTTGCCGCCGGGTCCACGTGG | + |
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Preference number: 6 (lower is better) Translates to: EDRPAGVPPRSR*PEVVLAAGSTW Trigger: CCACGTGGACCCGGCGGCAAGCACCACCTCTGGGCACCGTGAGCGCGGCGGCACGCCTGCCGGCCTGTCTTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS CCA 72 bp | AAAATGGACCCGCCCGCCCGGCGCCGGGTGGGCTCCTaGTGCCTCACGCGGCCGCTCCTCGGGGTTAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: KMDPPARRRVGS*CLTRPLLGVRL Trigger: GAGCCTAACCCCGAGGAGCGGCCGCGTGAGGCACCAGGAGCCCACCCGGCGCCGGGCGGGCGGGTCCATTTT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000578476.5 ENST00000579139.1 ENST00000580461.5 ENST00000581770.5 ENST00000584860.5 |
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| CDS CCA 72 bp | CGGTGCCCAGAGGTGGTGCTTGCCGCCGGGTCCACGTaGGCCCGACCCAGCCGCTTAAAGCCCAAGCGCGTG | + |
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Preference number: 6 (lower is better) Translates to: RCPEVVLAAGST*ARPSRLKPKRV Trigger: CACGCGCTTGGGCTTTAAGCGGCTGGGTCGGGCCCACGTGGACCCGGCGGCAAGCACCACCTCTGGGCACCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS TCA 72 bp | AGCGGCTCAGGCCAGGCCACCCCCGACATAAGGGGGTaGCCCTTTCTGAAGACAGGCCGGCAGGCGTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: SGSGQATPDIRG*PFLKTGRQACR Trigger: GCGGCACGCCTGCCGGCCTGTCTTCAGAAAGGGTCACCCCCTTATGTCGGGGGTGGCCTGGCCTGAGCCGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS CCA 72 bp | CAAGCGCGTGCACCTCCCACCGCAGCACCAGCGCGCTaGAAGTCCCGCCCTTCACCTCCCAGATCGGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: QARAPPTAAPAR*KSRPSPPRSEG Trigger: ACCCTCCGATCTGGGAGGTGAAGGGCGGGACTTCCAGCGCGCTGGTGCTGCGGTGGGAGGTGCACGCGCTTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS CAA 90 bp | CAGGCCGCTCACCCCCGAAGGAAGGTGGACCTGCCCATCCGCAGTTaGCCAATAGCCCGGCTTGTGCGGCAAAATGGACCCGCCCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: QAAHPRRKVDLPIRS*PIARLVRQNGPARP Trigger: CGGGCGGGCGGGTCCATTTTGCCGCACAAGCCGGGCTATTGGCAAACTGCGGATGGGCAGGTCCACCTTCCTTCGGGGGTGAGCGGCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000577738.5 ENST00000578476.5 ENST00000579139.1 ENST00000580461.5 ENST00000584860.5 |
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| CDS CAA 90 bp | TTGTCTCTGGATCCCCGAAGGAAGGTGGACCTGCCCATCCGCAGTTaGCCAATAGCCCGGCTTGTGCGGCAAAATGGACCCGCCCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: LSLDPRRKVDLPIRS*PIARLVRQNGPARP Trigger: CGGGCGGGCGGGTCCATTTTGCCGCACAAGCCGGGCTATTGGCAAACTGCGGATGGGCAGGTCCACCTTCCTTCGGGGATCCAGAGACAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581770.5 |
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| CDS CAA 72 bp | CACCCCCGAAGGAAGGTGGACCTGCCCATCCGCAGTTaGCCAATAGCCCGGCTTGTGCGGCAAAATGGACCC | + |
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Preference number: 6 (lower is better) Translates to: HPRRKVDLPIRS*PIARLVRQNGP Trigger: GGGTCCATTTTGCCGCACAAGCCGGGCTATTGGCAAACTGCGGATGGGCAGGTCCACCTTCCTTCGGGGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000577738.5 ENST00000578476.5 ENST00000579139.1 ENST00000580461.5 ENST00000584860.5 |
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| CDS CAA 72 bp | GATCCCCGAAGGAAGGTGGACCTGCCCATCCGCAGTTaGCCAATAGCCCGGCTTGTGCGGCAAAATGGACCC | + |
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Preference number: 6 (lower is better) Translates to: DPRRKVDLPIRS*PIARLVRQNGP Trigger: GGGTCCATTTTGCCGCACAAGCCGGGCTATTGGCAAACTGCGGATGGGCAGGTCCACCTTCCTTCGGGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581770.5 |
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| CDS GCA 72 bp | GGCTATACCCAACAACTCACTACCAGGCCCGCCTCCTaGACTGGGCCCCACCTCTCGTTCCACGTTGATGTA | + |
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Preference number: 6 (lower is better) Translates to: GYTQQLTTRPAS*TGPHLSFHVDV Trigger: TACATCAACGTGGAACGAGAGGTGGGGCCCAGTGCAGGAGGCGGGCCTGGTAGTGAGTTGTTGGGTATAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577731.1 |
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| CDS TCA 72 bp | ATCCTGACAGCCGGGCTCTGTCAGGAGTGGCCTGCATaGTGCCATCAATCTGCTGTCCCAGATCCAACTCCC | + |
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Preference number: 6 (lower is better) Translates to: ILTAGLCQEWPA*CHQSAVPDPTP Trigger: GGGAGTTGGATCTGGGACAGCAGATTGATGGCATCATGCAGGCCACTCCTGACAGAGCCCGGCTGTCAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS TCA 72 bp | TTTTGTCCCCTGCCCGACCGAAGCACTCAGAAATCCTaGCAGCCGGGCTCTGTCAGGAGTGGCCTGCATGAT | + |
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Preference number: 6 (lower is better) Translates to: FCPLPDRSTQKS*QPGSVRSGLHD Trigger: ATCATGCAGGCCACTCCTGACAGAGCCCGGCTGTCAGGATTTCTGAGTGCTTCGGTCGGGCAGGGGACAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS CAA 90 bp | GAGAGGAGCCAAGTAGTCTGCTCTCAGAGTACAAAGACTGATCCTTaGCCCAGGACCTTCCCGCCAGGCAGACAACAGCCCTGGGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: ERSQVVCSQSTKTDP*PRTFPPGRQQPWEV Trigger: TACTTCCCAGGGCTGTTGTCTGCCTGGCGGGAAGGTCCTGGGCAAAGGATCAGTCTTTGTACTCTGAGAGCAGACTACTTGGCTCCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584901.5 |
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| CDS TCA 72 bp | CTGCAACCTCCACCTCCTGGGTTAAATTCTCCTGCCTaGGCTTCCCGAGTAGCTGGGATAAAAGGCACACGC | + |
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Preference number: 6 (lower is better) Translates to: LQPPPPGLNSPA*ASRVAGIKGTR Trigger: GCGTGTGCCTTTTATCCCAGCTACTCGGGAAGCTCAGGCAGGAGAATTTAACCCAGGAGGTGGAGGTTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584798.1 |
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| CDS TCA 72 bp | GAGGAGCCAAGTAGTCTGCTCTCAGAGTACAAAGACTaGTCCTTTGCCCAGGACCTTCCCGCCAGGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: EEPSSLLSEYKD*SFAQDLPARQT Trigger: TGTCTGCCTGGCGGGAAGGTCCTGGGCAAAGGATCAGTCTTTGTACTCTGAGAGCAGACTACTTGGCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584901.5 |
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| CDS CAA 72 bp | ATACCCAAAGGAGGAGTTTCTATAAAACTGAGGCATTaGCCCCATGCAGGCAGCGGCTCAGGCCAGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: IPKGGVSIKLRH*PHAGSGSGQAT Trigger: GGTGGCCTGGCCTGAGCCGCTGCCTGCATGGGGCAAATGCCTCAGTTTTATAGAAACTCCTCCTTTGGGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577929.1 |
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| CDS CAA 72 bp | CAAGTAGTCTGCTCTCAGAGTACAAAGACTGATCCTTaGCCCAGGACCTTCCCGCCAGGCAGACAACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: QVVCSQSTKTDP*PRTFPPGRQQP Trigger: GGGCTGTTGTCTGCCTGGCGGGAAGGTCCTGGGCAAAGGATCAGTCTTTGTACTCTGAGAGCAGACTACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584901.5 |
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| CDS GCA 72 bp | CTCACTGCAACCTCCACCTCCTGGGTTAAATTCTCCTaGCTGAGCTTCCCGAGTAGCTGGGATAAAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LTATSTSWVKFS*LSFPSSWDKRH Trigger: GTGCCTTTTATCCCAGCTACTCGGGAAGCTCAGGCAGGAGAATTTAACCCAGGAGGTGGAGGTTGCAGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584798.1 |
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| CDS CAA 72 bp | CAGAGCAGCTCTTCCCCCAGAGAGAAACCAGCATCCTaGGGAATGACTCTGGCTTACGCTGAAAGACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: QSSSSPREKPAS*GMTLAYAERLE Trigger: TTCCAGTCTTTCAGCGTAAGCCAGAGTCATTCCCAAGGATGCTGGTTTCTCTCTGGGGGAAGAGCTGCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000584901.5 |
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| CDS CCA 72 bp | GGAAAGCGTGCACAAGAGCAAAGTGACCCAGGGGATTaGAGAACCGAATTACTCACACAGGTATCTCCGGTT | + |
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Preference number: 6 (lower is better) Translates to: GKRAQEQSDPGD*RTELLTQVSPV Trigger: AACCGGAGATACCTGTGTGAGTAATTCGGTTCTCCAATCCCCTGGGTCACTTTGCTCTTGTGCACGCTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582848.5 ENST00000584901.5 |
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| CDS TCA 72 bp | GAAACCAGCATCCTTGGGAATGACTCTGGCTTACGCTaGAAGACTGGAAAGCGTGCACAAGAGCAAAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: ETSILGNDSGLR*KTGKRAQEQSD Trigger: GTCACTTTGCTCTTGTGCACGCTTTCCAGTCTTTCAGCGTAAGCCAGAGTCATTCCCAAGGATGCTGGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584901.5 |
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| CDS GCA 72 bp | GAACAGGTGATGCATATCCATGTCCTATTGCACTCCTaGCATAGGACCCAAGCTACGAGGCATGTTCACTCT | + |
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Preference number: 6 (lower is better) Translates to: EQVMHIHVLLHS*HRTQATRHVHS Trigger: AGAGTGAACATGCCTCGTAGCTTGGGTCCTATGGCAGGAGTGCAATAGGACATGGATATGCATCACCTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584798.1 |
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| CDS GCA 72 bp | GAGCTGAGCTGTAGTCTCCGAGCAAACAGAATCTGGTaGCTACTAACAAAAGCCTCAGAGCTTACAACCCTC | + |
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Preference number: 6 (lower is better) Translates to: ELSCSLRANRIW*LLTKASELTTL Trigger: GAGGGTTGTAAGCTCTGAGGCTTTTGTTAGTAGGCACCAGATTCTGTTTGCTCGGAGACTACAGCTCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000580886.5 ENST00000583899.5 |
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| CDS CCA 72 bp | GTGGAGCTGAGCTGTAGTCTCCGAGCAAACAGAATCTaGTGCCTACTAACAAAAGCCTCAGAGCTTACAACC | + |
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Preference number: 6 (lower is better) Translates to: VELSCSLRANRI*CLLTKASELTT Trigger: GGTTGTAAGCTCTGAGGCTTTTGTTAGTAGGCACCAGATTCTGTTTGCTCGGAGACTACAGCTCAGCTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000580886.5 ENST00000583899.5 |
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| CDS CAA 90 bp | CCAGCAACCAGTTTTATAGAACAGGTGATGCATATCCATGTCCTATaGCACTCCTGCCATAGGACCCAAGCTACGAGGCATGTTCACTCT | + |
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Preference number: 6 (lower is better) Translates to: PATSFIEQVMHIHVL*HSCHRTQATRHVHS Trigger: AGAGTGAACATGCCTCGTAGCTTGGGTCCTATGGCAGGAGTGCAATAGGACATGGATATGCATCACCTGTTCTATAAAACTGGTTGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584798.1 |
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| CDS TCA 72 bp | AAGAAATTAAAGCTTGAGTCATGGAAAAGGTGGAGCTaGGCTGTAGTCTCCGAGCAAACAGAATCTGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: KKLKLESWKRWS*AVVSEQTESGA Trigger: GGCACCAGATTCTGTTTGCTCGGAGACTACAGCTCAGCTCCACCTTTTCCATGACTCAAGCTTTAATTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000580886.5 ENST00000583899.5 |
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| CDS GCA 72 bp | CGAGGCATGTTCACTCTGAGAAAACTGAGAGCCAAGTaGCTTAGAATGGAGCTCTGCTGTAACTTCTTACAT | + |
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Preference number: 6 (lower is better) Translates to: RGMFTLRKLRAK*LRMELCCNFLH Trigger: ATGTAAGAAGTTACAGCAGAGCTCCATTCTAAGGCACTTGGCTCTCAGTTTTCTCAGAGTGAACATGCCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584798.1 |
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| CDS CAA 72 bp | AGTTTTATAGAACAGGTGATGCATATCCATGTCCTATaGCACTCCTGCCATAGGACCCAAGCTACGAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SFIEQVMHIHVL*HSCHRTQATRH Trigger: ATGCCTCGTAGCTTGGGTCCTATGGCAGGAGTGCAATAGGACATGGATATGCATCACCTGTTCTATAAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584798.1 |
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| CDS TCA 72 bp | TCCAGTTACTCTAGGGGATGCAAAGAAATTAAAGCTTaGGTCATGGAAAAGGTGGAGCTGAGCTGTAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSYSRGCKEIKA*VMEKVELSCSL Trigger: GAGACTACAGCTCAGCTCCACCTTTTCCATGACTCAAGCTTTAATTTCTTTGCATCCCCTAGAGTAACTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000580886.5 ENST00000583899.5 |
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| CDS TCA 72 bp | TCAAGTCCTAGGTTAATGAGGTCAATAAGCAACCAATaGACCAAGCATTTCATGGCTCACAAACTACCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSPRLMRSISNQ*TKHFMAHKLPS Trigger: GGAAGGTAGTTTGTGAGCCATGAAATGCTTGGTTCATTGGTTGCTTATTGACCTCATTAACCTAGGACTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579085.5 ENST00000584054.5 ENST00000584798.1 |
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| CDS TCA 72 bp | CATTTAAAAACATGCTCTGACATCAGTGTTGCAGCATaGCCCAGGAAAAAGTCCAGCATTAGAATTGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HLKTCSDISVAA*PRKKSSIRIVC Trigger: ACACACAATTCTAATGCTGGACTTTTTCCTGGGTCATGCTGCAACACTGATGTCAGAGCATGTTTTTAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000584798.1 |
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| CDS CCA 72 bp | TCACAAACTACCTTCCCAATCAACACAGTTACACAATaGGAACCAGATCAGAAACAAGGACCAGTTATTAAC | + |
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Preference number: 6 (lower is better) Translates to: SQTTFPINTVTQ*EPDQKQGPVIN Trigger: GTTAATAACTGGTCCTTGTTTCTGATCTGGTTCCCATTGTGTAACTGTGTTGATTGGGAAGGTAGTTTGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579085.5 ENST00000584054.5 ENST00000584798.1 |
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