RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF3L (Homo sapiens)

Ensembl gene IDs: ENSG00000100129

Ensembl transcript IDs: ENST00000381683.10, ENST00000406934.5, ENST00000412331.6, ENST00000414316.5, ENST00000436452.6, ENST00000439997.5, ENST00000476955.5, ENST00000477256.5, ENST00000624234.3, ENST00000652021.1

Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGATCTTTCAGTCAGCTTaGTCCAGCTGTTCTCATAGA +
Preference number: 2 (lower is better)
Translates to: EDSIIANLWSNGFSLGPRIFQSA*SSCSHR
Trigger: TCTATGAGAACAGCTGGACCAAGCTGACTGAAAGAT...CCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436452.6
3UTR-3UTR CCA 90 bp CAGGAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAATCTTTCAGTCAGCTTaGTCCAGCTCATTTGTAGGA +
Preference number: 2 (lower is better)
Translates to: QEDSIIANLWSNGFSLGPIFQSA*SSSFVG
Trigger: TCCTACAAATGAGCTGGACCAAGCTGACTGAAAGAT...TGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439997.5
3UTR-3UTR TCA 90 bp GGAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGCTGGTCAATCAAATCTaGGACAGTTTTGTGGAAATA +
Preference number: 2 (lower is better)
Translates to: GRQHHCQPVEQWLQPRAKLVNQI*DSFVEI
Trigger: TATTTCCACAAAACTGTCTCAGATTTGATTGACCAG...CTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436452.6
3UTR-3UTR CAA 90 bp AGGAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAAAATCTGAGACAGTTTaGTGGAAATACTGGATGAAG +
Preference number: 3 (lower is better)
Translates to: RKTASLPTCGAMASASGQKSETV*WKYWMK
Trigger: CTTCATCCAGTATTTCCACAAAACTGTCTCAGATTT...TTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436452.6
CDS-3UTR GCA 90 bp GGAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGCATGGCTGCCTCGCTTaGGAGCACCGCCGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GRQHHCQPVEQWLQPRAKHGCLA*EHRRKE
Trigger: CTCTTTCCGGCGGTGCTCGCAAGCGAGGCAGCCATG...CTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439997.5
CDS-3UTR GCA 90 bp GAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGGGGATAAGACATGGCTaGCTCGCTTGCGAGCACCGC +
Preference number: 4 (lower is better)
Translates to: EDSIIANLWSNGFSLGPRGIRHG*LACEHR
Trigger: GCGGTGCTCGCAAGCGAGGCAGCCATGTCTTATCCC...CCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR CCA 90 bp GACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGTGTCAGCGGGATAAGACATaGCTGCCTCGCTTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: DSIIANLWSNGFSLGPRCQRDKT*LPRLRA
Trigger: TGCTCGCAAGCGAGGCAGCCATGTCTTATCCCGCTG...ACACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR CCA 90 bp GGAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGCAACCTGTGGAGCAATaGCTTCAGCCTCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GRQHHCQPVEQWLQPRAKQPVEQ*LQPRAK
Trigger: CTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTG...CTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR CCA 90 bp GACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGTGTCAACCTGTGGAGCAATaGCTTCAGCCTCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: DSIIANLWSNGFSLGPRCQPVEQ*LQPRAK
Trigger: CTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTG...ACACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR TCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAACCCGCGCCTGCGTCCTaGGGCCGGAAGTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQPAPAS*GRKFSP
Trigger: GGGGCTGAACTTCCGGCCTCAGGACGCAGGCGCGGG...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS-3UTR CCA 90 bp AGGAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAACAGCGGGATAAGACATaGCTGCCTCGCTTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: RKTASLPTCGAMASASGQQRDKT*LPRLRA
Trigger: TGCTCGCAAGCGAGGCAGCCATGTCTTATCCCGCTG...TTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR TCA 90 bp GGAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGAGGAAGGTCCCCCACTaGCTTTGGCATATATGTGCC +
Preference number: 4 (lower is better)
Translates to: GRQHHCQPVEQWLQPRAKRKVPH*LWHICA
Trigger: GGCACATATATGCCAAAGTCAGTGGGGGACCTTCCT...CTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR TCA 90 bp GACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGTGTAGGAAGGTCCCCCACTaGCTTTGGCATATATGTGCC +
Preference number: 4 (lower is better)
Translates to: DSIIANLWSNGFSLGPRCRKVPH*LWHICA
Trigger: GGCACATATATGCCAAAGTCAGTGGGGGACCTTCCT...ACACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR GCA 90 bp AGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGTGGGAAGACAGCATCATTaGCAACCTGTGGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: RQHHCQPVEQWLQPRAKVGRQHH*QPVEQW
Trigger: CCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCC...CACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR CCA 90 bp GACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGTGTATCATTGCCAACCTGTaGAGCAATGGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DSIIANLWSNGFSLGPRCIIANL*SNGFSL
Trigger: GAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGAT...ACACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR GCA 90 bp AAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGTGGAAGACAGCATCATTaGCAACCTGTGGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: KTASLPTCGAMASASGQGGRQHH*QPVEQW
Trigger: CCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCC...ACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR GCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGCCCCACTCGGGCCTaGCGGGAAACCGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQSPTRA*RETGSL
Trigger: AAGGCTTCCGGTTTCCCGGCAGGCCCGAGTGGGGCT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS-3UTR CCA 90 bp AGGAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAATCATTGCCAACCTGTaGAGCAATGGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RKTASLPTCGAMASASGQIIANL*SNGFSL
Trigger: GAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGAT...TTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR TCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCCCGGAAAGAGCGAAATaGGCGGCCCGCGCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIPERAK*AARACV
Trigger: GACGCAGGCGCGGGCCGCTCATTTCGCTCTTTCCGG...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412331.6
ENST00000624234.3
CDS-3UTR CCA 90 bp AAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGTAGCAAGGTCCTGCTTTaGATCTCCTGTGTGCATATC +
Preference number: 4 (lower is better)
Translates to: KTASLPTCGAMASASGQGSKVLL*ISCVHI
Trigger: GATATGCACACAGGAGATCCAAAGCAGGACCTTGCT...ACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439997.5
CDS-3UTR TCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCGGCAGGAGAGTCGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIGRRVA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCGACTCTCCTGCC...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS-3UTR TCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGGTGGAGCTTGCAGTaGGCCGAGATCGCGCCAGTA +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQRWSLQ*AEIAPV
Trigger: TACTGGCGCGATCTCGGCTCACTGCAAGCTCCACCT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412331.6
ENST00000652021.1
CDS-3UTR GCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAGGGATAAGACATGGCTaGCTCGCTTGCGAGCACCGC +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQGIRHG*LACEHR
Trigger: GCGGTGCTCGCAAGCGAGGCAGCCATGTCTTATCCC...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp AGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGTGATCTTTCAGTCAGCTTaGTCCAGCTGTTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: RQHHCQPVEQWLQPRAKVIFQSA*SSCSHR
Trigger: TCTATGAGAACAGCTGGACCAAGCTGACTGAAAGAT...CACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436452.6
CDS-3UTR CCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCGTAACCCCACCAGTTTaGGAGGCCGAGGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIVTPPV*EAEAGG
Trigger: TCCGCCCGCCTCGGCCTCCCAAACTGGTGGGGTTAC...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS-3UTR GCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCCATGGCTGCCTCGCTTaGGAGCACCGCCGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIHGCLA*EHRRKE
Trigger: CTCTTTCCGGCGGTGCTCGCAAGCGAGGCAGCCATG...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412331.6
ENST00000624234.3
CDS-3UTR CCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAACAGCGGGATAAGACATaGCTGCCTCGCTTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQQRDKT*LPRLRA
Trigger: TGCTCGCAAGCGAGGCAGCCATGTCTTATCCCGCTG...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAACAACCTGTGGAGCAATaGCTTCAGCCTCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQQPVEQ*LQPRAK
Trigger: CTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTG...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAAAATTGGCCGGGCATaGTGGCGGGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQKIGRA*WRVPVV
Trigger: GACTACAGGCACCCGCCACCATGCCCGGCCAATTTT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000412331.6
ENST00000652021.1
CDS-3UTR TCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCAGGTGGAGCTTGCAGTaGGCCGAGATCGCGCCAGTA +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIRWSLQ*AEIAPV
Trigger: TACTGGCGCGATCTCGGCTCACTGCAAGCTCCACCT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412331.6
ENST00000652021.1
CDS-3UTR GCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCGGGATAAGACATGGCTaGCTCGCTTGCGAGCACCGC +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIGIRHG*LACEHR
Trigger: GCGGTGCTCGCAAGCGAGGCAGCCATGTCTTATCCC...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAGGGCTGAGATACCGCTaGTCCACACGAGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQGLRYR*STRGSS
Trigger: TGAAGAACCTCGTGTGGACCAGCGGTATCTCAGCCC...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR TCA 90 bp AGGAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAACTGGTCAATCAAATCTaGGACAGTTTTGTGGAAATA +
Preference number: 4 (lower is better)
Translates to: RKTASLPTCGAMASASGQLVNQI*DSFVEI
Trigger: TATTTCCACAAAACTGTCTCAGATTTGATTGACCAG...TTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR TCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGGAAGGTCCCCCACTaGCTTTGGCATATATGTGCC +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQRKVPH*LWHICA
Trigger: GGCACATATATGCCAAAGTCAGTGGGGGACCTTCCT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR TCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAGGTTTGAGACCAGCCTaGCCAATATGGAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQGLRPA*PIWRNP
Trigger: GGGGTTTCTCCATATTGGTCAGGCTGGTCTCAAACC...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS-3UTR GCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCCCGAGATCGCGCCATTaGACTCTAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIPRSRH*TLAWAT
Trigger: TGTTGCCCAGGCTAGAGTGCAATGGCGCGATCTCGG...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS-3UTR CCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCCAGCGGGATAAGACATaGCTGCCTCGCTTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIQRDKT*LPRLRA
Trigger: TGCTCGCAAGCGAGGCAGCCATGTCTTATCCCGCTG...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCCAACCTGTGGAGCAATaGCTTCAGCCTCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIQPVEQ*LQPRAK
Trigger: CTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTG...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR TCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAATGTTCTCCAGCACCTTaGTGGCCTGGTAGTAATCTC +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQCSPAP*WPGSNL
Trigger: GAGATTACTACCAGGCCATCAAGGTGCTGGAGAACA...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR TCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCAGGCCTCTGGCCATCTaGGACAGCCATATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIRPLAI*DSHIQK
Trigger: CTTCTGGATATGGCTGTCTCAGATGGCCAGAGGCCT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS-3UTR GCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAGGAAGACAGCATCATTaGCAACCTGTGGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQGRQHH*QPVEQW
Trigger: CCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCC...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAATCATTGCCAACCTGTaGAGCAATGGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQIIANL*SNGFSL
Trigger: GAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGAT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCGGGCTGAGATACCGCTaGTCCACACGAGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIGLRYR*STRGSS
Trigger: TGAAGAACCTCGTGTGGACCAGCGGTATCTCAGCCC...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCCCTTTCCGAGGCCTCTaGCCATCTGAGACAGCCATA +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIPFRGL*PSETAI
Trigger: TATGGCTGTCTCAGATGGCCAGAGGCCTCGGAAAGG...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS-3UTR CCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAATCCTAGCACATTTTaGGAGGCCAAGGCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQNPSTF*EAKAGE
Trigger: TTCGCCTGCCTTGGCCTCCCAAAATGTGCTAGGATT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412331.6
ENST00000652021.1
CDS-3UTR CCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCAGAATGGCAGGAACCTaGGAGGTGGAGCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIRMAGT*EVELAV
Trigger: CACTGCAAGCTCCACCTCCCAGGTTCCTGCCATTCT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412331.6
ENST00000652021.1
CDS-3UTR TCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCAGGAAGGTCCCCCACTaGCTTTGGCATATATGTGCC +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIRKVPH*LWHICA
Trigger: GGCACATATATGCCAAAGTCAGTGGGGGACCTTCCT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAGCATATCATAGTCGCTaGGATAAGCGTAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQAYHSR*DKRRGH
Trigger: ATGACCCCTACGCTTATCCCAGCGACTATGATATGC...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGCAAGGTCCTGCTTTaGATCTCCTGTGTGCATATC +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQSKVLL*ISCVHI
Trigger: GATATGCACACAGGAGATCCAAAGCAGGACCTTGCT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR TCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAACAACTGATGTATCCTaGAAGCATCAGGACACATGG +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQTTDVS*KHQDTW
Trigger: CCATGTGTCCTGATGCTTTCAGGATACATCAGTTGT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR GCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCGGAAGACAGCATCATTaGCAACCTGTGGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIGRQHH*QPVEQW
Trigger: CCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCC...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCATCATTGCCAACCTGTaGAGCAATGGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIIIANL*SNGFSL
Trigger: GAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGAT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCAATCCTAGCACATTTTaGGAGGCCAAGGCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKINPSTF*EAKAGE
Trigger: TTCGCCTGCCTTGGCCTCCCAAAATGTGCTAGGATT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412331.6
ENST00000652021.1
CDS-3UTR TCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAGTTCCTGAATGTGTGTaGATATCATCAAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQVPECV*ISSRSL
Trigger: CAGAGACCTTGATGATATTCACACACATTCAGGAAC...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCAGCAAGGTCCTGCTTTaGATCTCCTGTGTGCATATC +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKISKVLL*ISCVHI
Trigger: GATATGCACACAGGAGATCCAAAGCAGGACCTTGCT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAATCTTTCAGTCAGCTTaGTCCAGCTGTTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQIFQSA*SSCSHR
Trigger: TCTATGAGAACAGCTGGACCAAGCTGACTGAAAGAT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAAGCATCAGGACACATaGGAAATGTATTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQKHQDT*EMYYCH
Trigger: GTGGCAGTAATACATTTCCCATGTGTCCTGATGCTT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR TCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAGGGTTACAAGTAGCCTaGATTTTCCTCTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQGLQVA*IFLSSN
Trigger: ATTTGAAGAGAGGAAAATTCAGGCTACTTGTAACCC...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS-3UTR CCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAATGAGACGACAAATCTaGCTCCAAAGATCCTTTACT +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQMRRQI*LQRSFT
Trigger: AGTAAAGGATCTTTGGAGCCAGATTTGTCGTCTCAT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR TCA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAACTGGTCAATCAAATCTaGGACAGTTTTGTGGAAATA +
Preference number: 4 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQLVNQI*DSFVEI
Trigger: TATTTCCACAAAACTGTCTCAGATTTGATTGACCAG...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR TCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCGTTCCTGAATGTGTGTaGATATCATCAAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIVPECV*ISSRSL
Trigger: CAGAGACCTTGATGATATTCACACACATTCAGGAAC...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCATAAGGACACGTATTTaGCGTAAAGGAGAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIIRTRI*RKGEAK
Trigger: CTTTGCCTCTCCTTTACGCCAAATACGTGTCCTTAT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS-3UTR CCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCAAGCATCAGGACACATaGGAAATGTATTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKIKHQDT*EMYYCH
Trigger: GTGGCAGTAATACATTTCCCATGTGTCCTGATGCTT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR TCA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCCTGGTCAATCAAATCTaGGACAGTTTTGTGGAAATA +
Preference number: 4 (lower is better)
Translates to: NPQILSYNNETTNLAPKILVNQI*DSFVEI
Trigger: TATTTCCACAAAACTGTCTCAGATTTGATTGACCAG...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS GCA 90 bp AGGGCCGGGCGGGAGGTCGGCCGGAGCTGGCCGCGACCCGGAAGCTaGCTCGCGCCGGGACCCACATCCAGTGGTCCCAGAGATCACCCC +
Preference number: 5 (lower is better)
Translates to: RAGREVGRSWPRPGS*LAPGPTSSGPRDHP
Trigger: GGGGTGATCTCTGGGACCACTGGATGTGGGTCCCGGCGCGAGGCAGCTTCCGGGTCGCGGCCAGCTCCGGCCGACCTCCCGCCCGGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406934.5
CDS CCA 90 bp AACTGTGGGAGCAGCCTGAGGGCCGGGCGGGAGGTCGGCCGGAGCTaGCCGCGACCCGGAAGCTGCCTCGCGCCGGGACCCACATCCAGT +
Preference number: 5 (lower is better)
Translates to: NCGSSLRAGREVGRS*PRPGSCLAPGPTSS
Trigger: ACTGGATGTGGGTCCCGGCGCGAGGCAGCTTCCGGGTCGCGGCCAGCTCCGGCCGACCTCCCGCCCGGCCCTCAGGCTGCTCCCACAGTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406934.5
CDS CCA 90 bp CTGGCCGCGACCCGGAAGCTGCCTCGCGCCGGGACCCACATCCAGTaGTCCCAGAGATCACCCCGTCGTGGAGCCCACCGCGCCCTTACG +
Preference number: 5 (lower is better)
Translates to: LAATRKLPRAGTHIQ*SQRSPRRGAHRALT
Trigger: CGTAAGGGCGCGGTGGGCTCCACGACGGGGTGATCTCTGGGACCACTGGATGTGGGTCCCGGCGCGAGGCAGCTTCCGGGTCGCGGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406934.5
CDS TCA 90 bp GAGCACCGCCGGAAAGAGCGAAATGAGCGGCCCGCGCCTGCGTCCTaGGGCCGGAAGTTCAGCCCCACTCGGGCCTGCCGGGAAACCGGA +
Preference number: 5 (lower is better)
Translates to: EHRRKERNERPAPAS*GRKFSPTRACRETG
Trigger: TCCGGTTTCCCGGCAGGCCCGAGTGGGGCTGAACTTCCGGCCTCAGGACGCAGGCGCGGGCCGCTCATTTCGCTCTTTCCGGCGGTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS TCA 90 bp GGGCCTGCCGGGAAACCGGAAGCCTTTCCGAGGCCTCTGGCCATCTaGGACAGCCATATCCAGAAGGAAGAGGAGCCGCGTTCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: GPAGKPEAFPRPLAI*DSHIQKEEEPRSVA
Trigger: AGCCACGGAACGCGGCTCCTCTTCCTTCTGGATATGGCTGTCTCAGATGGCCAGAGGCCTCGGAAAGGCTTCCGGTTTCCCGGCAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS-3UTR CAA 90 bp GACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGTGTACATGGCTGCCTCGCTaGCGAGCACCGCCGGAAAGA +
Preference number: 5 (lower is better)
Translates to: DSIIANLWSNGFSLGPRCTWLPR*RAPPER
Trigger: TCTTTCCGGCGGTGCTCGCAAGCGAGGCAGCCATGT...ACACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439997.5
CDS-3UTR CAA 90 bp GGAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGAGGAAGACAGCATCATaGCCAACCTGTGGAGCAATG +
Preference number: 5 (lower is better)
Translates to: GRQHHCQPVEQWLQPRAKRKTAS*PTCGAM
Trigger: CATTGCTCCACAGGTTGGCAATGATGCTGTCTTCCT...CTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR CAA 90 bp GAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGAGGAAGACAGCATCATaGCCAACCTGTGGAGCAATG +
Preference number: 5 (lower is better)
Translates to: EDSIIANLWSNGFSLGPRRKTAS*PTCGAM
Trigger: CATTGCTCCACAGGTTGGCAATGATGCTGTCTTCCT...CCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR CAA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAATGTAACCCCACCAGTTaGGGAGGCCGAGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQCNPTS*GGRGGR
Trigger: CCGCCCGCCTCGGCCTCCCAAACTGGTGGGGTTACA...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS-3UTR CAA 90 bp GAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGAAGCAAGGTCCTGCTTaGGATCTCCTGTGTGCATAT +
Preference number: 5 (lower is better)
Translates to: EDSIIANLWSNGFSLGPRKQGPA*DLLCAY
Trigger: ATATGCACACAGGAGATCCAAAGCAGGACCTTGCTT...CCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439997.5
CDS-3UTR CAA 90 bp GACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGTGTAAGCAAGGTCCTGCTTaGGATCTCCTCAGACTCATA +
Preference number: 5 (lower is better)
Translates to: DSIIANLWSNGFSLGPRCKQGPA*DLLRLI
Trigger: TATGAGTCTGAGGAGATCCAAAGCAGGACCTTGCTT...ACACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436452.6
CDS-3UTR CAA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAACATGGCTGCCTCGCTaGCGAGCACCGCCGGAAAGA +
Preference number: 5 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQTWLPR*RAPPER
Trigger: TCTTTCCGGCGGTGCTCGCAAGCGAGGCAGCCATGT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412331.6
ENST00000624234.3
CDS-3UTR CAA 90 bp GAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGTACTGGATGAAGTTTTaGATCACCTCAGGGATCACC +
Preference number: 5 (lower is better)
Translates to: EDSIIANLWSNGFSLGPRYWMKF*ITSGIT
Trigger: GGTGATCCCTGAGGTGATCAAAAACTTCATCCAGTA...CCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR CAA 90 bp CAGGAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCATACTGGATGAAGTTTTaGATCACCTCAGGGATCACC +
Preference number: 5 (lower is better)
Translates to: QEDSIIANLWSNGFSLGPYWMKF*ITSGIT
Trigger: GGTGATCCCTGAGGTGATCAAAAACTTCATCCAGTA...TGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR CAA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAGCCGAGATCGCGCCATaGCACTCTAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQAEIAP*HSSLGN
Trigger: GTTGCCCAGGCTAGAGTGCAATGGCGCGATCTCGGC...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS GCA 90 bp GATGCCAAGCAGAGAGCTAAGGATACAGAGGCGAATAAGACACTGTaGCTGCCTTTGAGGAACTCACACGCCTTAGAGAAAAGGGACAGT +
Preference number: 5 (lower is better)
Translates to: DAKQRAKDTEANKTL*LPLRNSHALEKRDS
Trigger: ACTGTCCCTTTTCTCTAAGGCGTGTGAGTTCCTCAAAGGCAGGCACAGTGTCTTATTCGCCTCTGTATCCTTAGCTCTCTGCTTGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406934.5
CDS-3UTR CAA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCACATGGCTGCCTCGCTaGCGAGCACCGCCGGAAAGA +
Preference number: 5 (lower is better)
Translates to: NPQILSYNNETTNLAPKITWLPR*RAPPER
Trigger: TCTTTCCGGCGGTGCTCGCAAGCGAGGCAGCCATGT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412331.6
ENST00000624234.3
CDS-3UTR CAA 90 bp CAGGAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAAATCTGAGACAGTTTaGTGGAAATACTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: QEDSIIANLWSNGFSLGPKSETV*WKYWMK
Trigger: CTTCATCCAGTATTTCCACAAAACTGTCTCAGATTT...TGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR CAA 90 bp GAAGACAGCATCATTGCCAACCTGTGGAGCAATGGCTTCAGCCTCGGGCCAAGGAAATCTGAGACAGTTTaGTGGAAATACTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: EDSIIANLWSNGFSLGPRKSETV*WKYWMK
Trigger: CTTCATCCAGTATTTCCACAAAACTGTCTCAGATTT...CCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436452.6
ENST00000439997.5
CDS-3UTR CAA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCAGGCAGGCGAATCACTaGAGGCCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: NPQILSYNNETTNLAPKIRQANH*RPGVRD
Trigger: GTCTCGAACTCCTGGCCTCAAGTGATTCGCCTGCCT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412331.6
ENST00000652021.1
CDS GCA 90 bp GAGAAAAGGGACAGTAAACAGACAATGACAATACAACATTACGGGTaGAATGAGGTGGAGCAAAGGACAAGAGGCTGTGGGAATCAGCGA +
Preference number: 5 (lower is better)
Translates to: EKRDSKQTMTIQHYG*NEVEQRTRGCGNQR
Trigger: TCGCTGATTCCCACAGCCTCTTGTCCTTTGCTCCACCTCATTGCACCCGTAATGTTGTATTGTCATTGTCTGTTTACTGTCCCTTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406934.5
CDS-3UTR CAA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGGAAGACAGCATCATaGCCAACCTGTGGAGCAATG +
Preference number: 5 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQRKTAS*PTCGAM
Trigger: CATTGCTCCACAGGTTGGCAATGATGCTGTCTTCCT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CAA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCAGGAAGACAGCATCATaGCCAACCTGTGGAGCAATG +
Preference number: 5 (lower is better)
Translates to: NPQILSYNNETTNLAPKIRKTAS*PTCGAM
Trigger: CATTGCTCCACAGGTTGGCAATGATGCTGTCTTCCT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CAA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCAAGCAAGGTCCTGCTTaGGATCTCCTGTGTGCATAT +
Preference number: 5 (lower is better)
Translates to: NPQILSYNNETTNLAPKIKQGPA*DLLCAY
Trigger: ATATGCACACAGGAGATCCAAAGCAGGACCTTGCTT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CAA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCTACTGGATGAAGTTTTaGATCACCTCAGGGATCACC +
Preference number: 5 (lower is better)
Translates to: NPQILSYNNETTNLAPKIYWMKF*ITSGIT
Trigger: GGTGATCCCTGAGGTGATCAAAAACTTCATCCAGTA...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CAA 90 bp GCCACAACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAAATCTGAGACAGTTTaGTGGAAATACTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: ATTHKFSPTIMRRQIWLQKSETV*WKYWMK
Trigger: CTTCATCCAGTATTTCCACAAAACTGTCTCAGATTT...TTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTTGTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS-3UTR CAA 90 bp AACCCACAAATTCTCTCCTACAATAATGAGACGACAAATCTGGCTCCAAAGATCAAATCTGAGACAGTTTaGTGGAAATACTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: NPQILSYNNETTNLAPKIKSETV*WKYWMK
Trigger: CTTCATCCAGTATTTCCACAAAACTGTCTCAGATTT...GATCTTTGGAGCCAGATTTGTCGTCTCATTATTGTAGGAGAGAATTTGTGGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412331.6
ENST00000624234.3
ENST00000652021.1
CDS GCA 72 bp CGGGAGGTCGGCCGGAGCTGGCCGCGACCCGGAAGCTaGCTCGCGCCGGGACCCACATCCAGTGGTCCCAGA +
Preference number: 6 (lower is better)
Translates to: REVGRSWPRPGS*LAPGPTSSGPR
Trigger: TCTGGGACCACTGGATGTGGGTCCCGGCGCGAGGCAGCTTCCGGGTCGCGGCCAGCTCCGGCCGACCTCCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406934.5
CDS TCA 72 bp CGGAAAGAGCGAAATGAGCGGCCCGCGCCTGCGTCCTaGGGCCGGAAGTTCAGCCCCACTCGGGCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: RKERNERPAPAS*GRKFSPTRACR
Trigger: CCGGCAGGCCCGAGTGGGGCTGAACTTCCGGCCTCAGGACGCAGGCGCGGGCCGCTCATTTCGCTCTTTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS CCA 72 bp ACCCGGAAGCTGCCTCGCGCCGGGACCCACATCCAGTaGTCCCAGAGATCACCCCGTCGTGGAGCCCACCGC +
Preference number: 6 (lower is better)
Translates to: TRKLPRAGTHIQ*SQRSPRRGAHR
Trigger: GCGGTGGGCTCCACGACGGGGTGATCTCTGGGACCACTGGATGTGGGTCCCGGCGCGAGGCAGCTTCCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406934.5
CDS CAA 90 bp AGGACAAGCCAATCGAACACGCGAAGTGGGCGGGCAGAGCCAGGGTaGTCTAGGGACCGGGAACTGTGGGAGCAGCCTGAGGGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: RTSQSNTRSGRAEPG*SRDRELWEQPEGRA
Trigger: CGCCCGGCCCTCAGGCTGCTCCCACAGTTCCCGGTCCCTAGACAACCCTGGCTCTGCCCGCCCACTTCGCGTGTTCGATTGGCTTGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406934.5
CDS CAA 72 bp CAATCGAACACGCGAAGTGGGCGGGCAGAGCCAGGGTaGTCTAGGGACCGGGAACTGTGGGAGCAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: QSNTRSGRAEPG*SRDRELWEQPE
Trigger: CTCAGGCTGCTCCCACAGTTCCCGGTCCCTAGACAACCCTGGCTCTGCCCGCCCACTTCGCGTGTTCGATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406934.5
CDS TCA 72 bp GGGAAACCGGAAGCCTTTCCGAGGCCTCTGGCCATCTaGGACAGCCATATCCAGAAGGAAGAGGAGCCGCGT +
Preference number: 6 (lower is better)
Translates to: GKPEAFPRPLAI*DSHIQKEEEPR
Trigger: ACGCGGCTCCTCTTCCTTCTGGATATGGCTGTCTCAGATGGCCAGAGGCCTCGGAAAGGCTTCCGGTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412331.6
CDS CCA 72 bp GGCGAAACCTCGTCTCTGTGTGCATATCATAGTCGCTaGGATAAGCGTAGGGGTCATAAGCCGCCTCAGACT +
Preference number: 6 (lower is better)
Translates to: GETSSLCAYHSR*DKRRGHKPPQT
Trigger: AGTCTGAGGCGGCTTATGACCCCTACGCTTATCCCAGCGACTATGATATGCACACAGAGACGAGGTTTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414316.5
CDS CCA 72 bp CCTGCTTTGGATCTCCTGTGTGCATATCATAGTCGCTaGGATAAGCGTAGGGGTCATAAGCCGCCTCAGACT +
Preference number: 6 (lower is better)
Translates to: PALDLLCAYHSR*DKRRGHKPPQT
Trigger: AGTCTGAGGCGGCTTATGACCCCTACGCTTATCCCAGCGACTATGATATGCACACAGGAGATCCAAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381683.10
ENST00000412331.6
ENST00000439997.5
ENST00000476955.5
ENST00000477256.5
ENST00000624234.3
ENST00000652021.1
CDS CCA 72 bp CCTGCTTTGGATCTCCTGTGTGCATATCATAGTCGCTaGGATAAGCGTAGGGGTCATAAGCCGCCTAGAAGG +
Preference number: 6 (lower is better)
Translates to: PALDLLCAYHSR*DKRRGHKPPRR
Trigger: CCTTCTAGGCGGCTTATGACCCCTACGCTTATCCCAGCGACTATGATATGCACACAGGAGATCCAAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406934.5
CDS CAA 90 bp CAGAGAGCTAAGGATACAGAGGCGAATAAGACACTGTGCCTGCCTTaGAGGAACTCACACGCCTTAGAGAAAAGGGACAGTAAACAGACA +
Preference number: 6 (lower is better)
Translates to: QRAKDTEANKTLCLP*RNSHALEKRDSKQT
Trigger: TGTCTGTTTACTGTCCCTTTTCTCTAAGGCGTGTGAGTTCCTCAAAGGCAGGCACAGTGTCTTATTCGCCTCTGTATCCTTAGCTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406934.5