Pregenerated sensors for EIF3J (Homo sapiens)

Ensembl gene IDs: ENSG00000104131

Ensembl transcript IDs: ENST00000261868.10

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 72 bp	CAAGAGCTGTGTTCTATACTCTCAAAAAGTATCTCTTaGGAGGTAACACAAAATTTAAGTCCTCACAACAGT	+
Preference number: 3 (lower is better) Translates to: QELCSILSKSIS*EVTQNLSPHNS Trigger: ACTGTTGTGAGGACTTAAATTTTGTGTTACCTCCCAAGAGATACTTTTTGAGAGTATAGAACACAGCTCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261868.10
CDS-3UTR TCA 90 bp	CGTAGAGAACTGTACTCCCAAGAGCTGTGTTCTATACTCTCAAAAAGTATCTCTATCTCGAGCCGGGTGTaGGCGTGTGTGAGAGGGAGA	+
Preference number: 4 (lower is better) Translates to: RRELYSQELCSILSKSISISSRV*ACVRGR Trigger: TCTCCCTCTCACACACGCTCACACCCGGCTCGAGAT...AGAGATACTTTTTGAGAGTATAGAACACAGCTCTTGGGAGTACAGTTCTCTACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261868.10
3UTR CAA 72 bp	CCAAGAGCTGTGTTCTATACTCTCAAAAAGTATCTCTaGGGAGGTAACACAAAATTTAAGTCCTCACAACAG	+
Preference number: 4 (lower is better) Translates to: PRAVFYTLKKYL*GGNTKFKSSQQ Trigger: CTGTTGTGAGGACTTAAATTTTGTGTTACCTCCCAAGAGATACTTTTTGAGAGTATAGAACACAGCTCTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261868.10
CDS-3UTR TCA 90 bp	TTAAGATTTAGTAGAGAACGTAGAGAACTGTACTCCCAAGAGCTGTGTTCTATAAGGTATACAGAGCTTTaGCGTTCCTATTATTTCCTA	+
Preference number: 4 (lower is better) Translates to: LRFSRERRELYSQELCSIRYTEL*RSYYFL Trigger: TAGGAAATAATAGGAACGTCAAAGCTCTGTATACCT...TATAGAACACAGCTCTTGGGAGTACAGTTCTCTACGTTCTCTACTAAATCTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261868.10
CDS-3UTR TCA 90 bp	TTAAGATTTAGTAGAGAACGTAGAGAACTGTACTCCCAAGAGCTGTGTTCTATACTCAAATCACTTAGATaGTGGTCTTGTTTTCCACTT	+
Preference number: 4 (lower is better) Translates to: LRFSRERRELYSQELCSILKSLR*WSCFPL Trigger: AAGTGGAAAACAAGACCATCATCTAAGTGATTTGAG...TATAGAACACAGCTCTTGGGAGTACAGTTCTCTACGTTCTCTACTAAATCTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261868.10
CDS-3UTR CCA 90 bp	AGCCATAAACCTGAGTTACAGGCTCAGTTACTCCAAATAAATAGTTCTTATAGGGACAACATAAGGACCTaGCAAATCACTCATGTTTTA	+
Preference number: 4 (lower is better) Translates to: SHKPELQAQLLQINSSYRDNIRT*QITHVL Trigger: TAAAACATGAGTGATTTGCCAGGTCCTTATGTTGTC...CCTATAAGAACTATTTATTTGGAGTAACTGAGCCTGTAACTCAGGTTTATGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261868.10
CDS-3UTR GCA 90 bp	AGCCATAAACCTGAGTTACAGGCTCAGTTACTCCAAATAAATAGTTCTTATAGGATCTTAGCCCTTGTCTaGCTTAAAGGAATCTTTATT	+
Preference number: 4 (lower is better) Translates to: SHKPELQAQLLQINSSYRILALV*LKGIFI Trigger: AATAAAGATTCCTTTAAGGCAGACAAGGGCTAAGAT...CCTATAAGAACTATTTATTTGGAGTAACTGAGCCTGTAACTCAGGTTTATGGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261868.10
CDS-3UTR CAA 90 bp	AGCCATAAACCTGAGTTACAGGCTCAGTTACTCCAAATAAATAGTTCTTATAGGGGCAGCCCTATACCTTaGTTGCTCTATGGTGACAAC	+
Preference number: 5 (lower is better) Translates to: SHKPELQAQLLQINSSYRGSPIP*LLYGDN Trigger: GTTGTCACCATAGAGCAACAAAGGTATAGGGCTGCC...CCTATAAGAACTATTTATTTGGAGTAACTGAGCCTGTAACTCAGGTTTATGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261868.10
CDS-3UTR CAA 90 bp	TTAAGATTTAGTAGAGAACGTAGAGAACTGTACTCCCAAGAGCTGTGTTCTATAAGCCCTATACCTTTGTaGCTCTATGGTGACAACATA	+
Preference number: 5 (lower is better) Translates to: LRFSRERRELYSQELCSISPIPL*LYGDNI Trigger: TATGTTGTCACCATAGAGCAACAAAGGTATAGGGCT...TATAGAACACAGCTCTTGGGAGTACAGTTCTCTACGTTCTCTACTAAATCTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261868.10
CDS-3UTR CAA 90 bp	AGCCATAAACCTGAGTTACAGGCTCAGTTACTCCAAATAAATAGTTCTTATAGGACACTAACCACACATTaGGTTAAACTGCTTAGGAGA	+
Preference number: 5 (lower is better) Translates to: SHKPELQAQLLQINSSYRTLTTH*VKLLRR Trigger: TCTCCTAAGCAGTTTAACCAAATGTGTGGTTAGTGT...CCTATAAGAACTATTTATTTGGAGTAACTGAGCCTGTAACTCAGGTTTATGGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261868.10

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