RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF3I (Homo sapiens)

Ensembl gene IDs: ENSG00000084623

Ensembl transcript IDs: ENST00000373586.2, ENST00000471486.6, ENST00000474371.2, ENST00000483517.5, ENST00000489353.6, ENST00000676554.1, ENST00000676679.1, ENST00000676801.1, ENST00000676837.1, ENST00000676957.1, ENST00000676998.1, ENST00000677183.1, ENST00000677198.1, ENST00000677202.1, ENST00000677353.1, ENST00000677378.1, ENST00000677540.1, ENST00000677640.1, ENST00000677676.1, ENST00000677701.1, ENST00000677711.1, ENST00000677760.1, ENST00000677767.1, ENST00000677772.1, ENST00000677844.1, ENST00000678063.1, ENST00000678106.1, ENST00000678150.1, ENST00000678306.1, ENST00000678420.1, ENST00000678534.1, ENST00000678689.1, ENST00000678711.1, ENST00000678842.1, ENST00000678883.1, ENST00000678889.1, ENST00000678968.1, ENST00000679044.1, ENST00000679270.1, ENST00000679290.1

Found 589 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGACTCCCACCGCCCAGAGGGCGTCCCCTGCAGGAGAGCTTCATaGGCCTGGTGGAGGCCTGTGGGGACTCGGAGCAAAGCATGGACA +
Preference number: 1 (lower is better)
Translates to: PDSHRPEGVPCRRAS*AWWRPVGTRSKAWT
Trigger: TGTCCATGCTTTGCTCCGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGGGCGGTGGGAGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR CCA 90 bp TCCCACCGCCCAGAGGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTaGTGGAGGCCTGTGGGGACTCGGAGCAAAGCATGGACAACTGGC +
Preference number: 1 (lower is better)
Translates to: SHRPEGVPCRRASCA*WRPVGTRSKAWTTG
Trigger: GCCAGTTGTCCATGCTTTGCTCCGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGGGCGGTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR CCA 90 bp AGGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTGGTGGAGGCCTGTaGGGACTCGGAGCAAAGCATGGACAACTGGCTGAGTCGGCTGGA +
Preference number: 1 (lower is better)
Translates to: RASPAGELHAPGGGL*GLGAKHGQLAESAG
Trigger: TCCAGCCGACTCAGCCAGTTGTCCATGCTTTGCTCCGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR GCA 90 bp CCAAAGGTAGGGGATGATCAGACACTTCTGCCACCTCCTGCTGGCTaGCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGG +
Preference number: 1 (lower is better)
Translates to: PKVGDDQTLLPPPAG*PGAIQSFQLCHSSG
Trigger: CCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCTGATCATCCCCTACCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
3UTR TCA 90 bp GCGGATCACAAGGTCAGGAGTCCGAGACCATTCTGGCCAACATGGTaGAACCTAACAATGCAAAAACTAGCTGGGTGTGGTGGCGGTCGC +
Preference number: 1 (lower is better)
Translates to: ADHKVRSPRPFWPTW*NLTMQKLAGCGGGR
Trigger: GCGACCGCCACCACACCCAGCTAGTTTTTGCATTGTTAGGTTTCACCATGTTGGCCAGAATGGTCTCGGACTCCTGACCTTGTGATCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
3UTR GCA 90 bp CGAGACGCTGTCTCAAAGATTAGGAACTCCTCTGTGGGTCGTGTGTaGCGTGAGACTGGACTCCCTAAAGGGCTCTGTGTCCCTTTTATC +
Preference number: 1 (lower is better)
Translates to: RDAVSKIRNSSVGRV*RETGLPKGLCVPFI
Trigger: GATAAAAGGGACACAGAGCCCTTTAGGGAGTCCAGTCTCACGGCACACACGACCCACAGAGGAGTTCCTAATCTTTGAGACAGCGTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR CCA 90 bp CCCCCACAATGTTGTAGCCCAACTTCTGGACAAGCATCTAGAACTTaGAAGCTTCCTGAGGCTTCAGCAGGAAGGCAGGTGGGGTTCTCT +
Preference number: 1 (lower is better)
Translates to: PPQCCSPTSGQASRT*KLPEASAGRQVGFS
Trigger: AGAGAACCCCACCTGCCTTCCTGCTGAAGCCTCAGGAAGCTTCCAAGTTCTAGATGCTTGTCCAGAAGTTGGGCTACAACATTGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679270.1
3UTR CCA 90 bp CTGACCACCGCCCAGGACCACCTGAATGGAAGAAGAAACTCTAGATaGGACCAATGGACACCAAGTCCATTTTGTGTTTTTCTGCTGCCA +
Preference number: 1 (lower is better)
Translates to: LTTAQDHLNGRRNSR*DQWTPSPFCVFLLP
Trigger: TGGCAGCAGAAAAACACAAAATGGACTTGGTGTCCATTGGTCCCATCTAGAGTTTCTTCTTCCATTCAGGTGGTCCTGGGCGGTGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679270.1
3UTR CCA 90 bp ATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATTaGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTG +
Preference number: 1 (lower is better)
Translates to: IRLVYIKGVVILPSN*WFPRTLCVSPEGYV
Trigger: CACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR CCA 90 bp AAACCTCAGAAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTaGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGG +
Preference number: 1 (lower is better)
Translates to: KPQKVKPWMGSTNVL*YGGSVEYEMGGQMR
Trigger: CCTCATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTTCTGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR CCA 90 bp ATTTTCTGGCAGGAGGTCACCAGTAACCTTGAACAGAGCAGTTTCTaGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTT +
Preference number: 1 (lower is better)
Translates to: IFWQEVTSNLEQSSF*EVGADAEFQENCVF
Trigger: AAAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGACCTCCTGCCAGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR TCA 90 bp AATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTaGTACTTCCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTT +
Preference number: 1 (lower is better)
Translates to: NAMLLPSDWCTSRVL*YFHQIGGFPGHCVF
Trigger: AAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp TTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGGCATGGACAACTGGCTaGGTCGGCTGGACGGCTGCC +
Preference number: 2 (lower is better)
Translates to: FLSDRGSPGNAMLLPSDWAWTTG*VGWTAA
Trigger: GGCAGCCGTCCAGCCGACTCAGCCAGTTGTCCATGC...CCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR TCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCTCATGGCCAGCGATaGTGCACTCCCCCAGGGGTC +
Preference number: 2 (lower is better)
Translates to: TSATSCWLPWGYSILPALSHGQR*CTPPGV
Trigger: GACCCCTGGGGGAGTGCATCATCGCTGGCCATGAGA...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679270.1
3UTR-3UTR CCA 90 bp TTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGGCAGTCCAGGGCATaGAGAGGTAAGGCCCCATTG +
Preference number: 2 (lower is better)
Translates to: FLSDRGSPGNAMLLPSDWWQSRA*RGKAPL
Trigger: CAATGGGGCCTTACCTCTCCATGCCCTGGACTGCCA...CCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR CCA 90 bp GCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTCCTGGTGGAGGCCTGTaGGGACTCGGAGCAAAGCAT +
Preference number: 2 (lower is better)
Translates to: APQGMLCCSHQTGVHQGCPGGGL*GLGAKH
Trigger: ATGCTTTGCTCCGAGTCCCCACAGGCCTCCACCAGG...ACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR GCA 90 bp TTACTCTGGGAAAGGCAGAGACCCAACCCAGGCTTAGGTCAGCTGCTTCACTGGCAGGCACCAGTCAGGTaGTTACTCTGGGAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: LLWERQRPNPGLGQLLHWQAPVR*LLWERQ
Trigger: CTGCCTTTCCCAGAGTAAGCACCTGACTGGTGCCTG...CCAGTGAAGCAGCTGACCTAAGCCTGGGTTGGGTCTCTGCCTTTCCCAGAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
3UTR-3UTR CCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGGGAGGCCAAGGTGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: SSSVAHNGFELSQARWFTGGQGG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCACCTTGGCCTCC...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
3UTR-3UTR TCA 90 bp TCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTTCTCTCCCATCAGACTaGGGAATCCTCAAAGCTAAG +
Preference number: 2 (lower is better)
Translates to: SCQTGAPQGMLCCSHQTGSLPSD*GILKAK
Trigger: CTTAGCTTTGAGGATTCCTCAGTCTGATGGGAGAGA...ACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CCA 90 bp AATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTCAAAGCATGGACAACTaGCTGAGTCGGCTGGACGGC +
Preference number: 2 (lower is better)
Translates to: NWWFPRTLCVSPEGYVTLQSMDN*LSRLDG
Trigger: GCCGTCCAGCCGACTCAGCCAGTTGTCCATGCTTTG...AAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR CCA 90 bp AATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGAGAGCTTCATGCGCCTaGTGGAGGCCTGTGGGGACT +
Preference number: 2 (lower is better)
Translates to: NVLWYGGSVEYEMGGQMRRASCA*WRPVGT
Trigger: AGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCT...CCTCATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR TCA 90 bp TTCTGGCAGGAGGTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGCAGTGGGCAGCCACTaGAGGCTTTTAAACAGAGCT +
Preference number: 2 (lower is better)
Translates to: FWQEVTSNLEQSSFWEVGAVGSH*RLLNRA
Trigger: AGCTCTGTTTAAAAGCCTTCAGTGGCTGCCCACTGC...TCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGACCTCCTGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR GCA 90 bp AAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTGGGCTCCCCAGGGAATaGTATGTTGCTCCCATCAGA +
Preference number: 2 (lower is better)
Translates to: KLVVSQDIVCFPRGLCDPGLPRE*YVAPIR
Trigger: TCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCC...AGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR GCA 90 bp TGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGAAACAGGCACCAGTCAGGTaGTTACTCTGGGAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: CCSWKKIARHQSGAYSGKQAPVR*LLWERQ
Trigger: CTGCCTTTCCCAGAGTAAGCACCTGACTGGTGCCTG...TTTCCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
3UTR-3UTR CCA 90 bp TTAGGAACTCCTCTGTGGGTCGTGTGTGCCGTGAGACTGGACTCCCTAAAGGGCTCAACTAATGTCCTTTaGTATGGTGGGAGTGTCGAG +
Preference number: 2 (lower is better)
Translates to: LGTPLWVVCAVRLDSLKGSTNVL*YGGSVE
Trigger: CTCGACACTCCCACCATACCAAAGGACATTAGTTGA...GCCCTTTAGGGAGTCCAGTCTCACGGCACACACGACCCACAGAGGAGTTCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR CCA 90 bp CCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTAATGCAAAAACTAGCTaGGTGTGGTGGCGGTCGCCT +
Preference number: 2 (lower is better)
Translates to: PQGMLCCSHQTGVHQGCCNAKTS*VWWRSP
Trigger: AGGCGACCGCCACCACACCCAGCTAGTTTTTGCATT...ACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
3UTR CAA 90 bp CCCTTTTATCAGATGGGCTCTTTACAGGATTCTGTGTCTCCCTCATaGGTCTTGAGCACTTGCTCCCTGGCTGTACTTGGCAAGGGCTTG +
Preference number: 2 (lower is better)
Translates to: PFYQMGSLQDSVSPS*VLSTCSLAVLGKGL
Trigger: CAAGCCCTTGCCAAGTACAGCCAGGGAGCAAGTGCTCAAGACCAATGAGGGAGACACAGAATCCTGTAAAGAGCCCATCTGATAAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR TCA 90 bp TCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATTGGTGCCTGGTACATGGGGCTaGAGGCACAGACAGCACCCT +
Preference number: 2 (lower is better)
Translates to: SHQTGVHQGCCDTSIKLVPGTWG*RHRQHP
Trigger: AGGGTGCTGTCTGTGCCTTCAGCCCCATGTACCAGG...CACCAATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR GCA 90 bp AATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGGGGCTCCCCAGGGAATaGTATGTTGCTCCCATCAGA +
Preference number: 2 (lower is better)
Translates to: NVLWYGGSVEYEMGGQMRGLPRE*YVAPIR
Trigger: TCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCC...CCTCATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CCA 90 bp GTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAAGATTCCAGGAACTGGTaGAGTGGAAGTGGATCCAGG +
Preference number: 2 (lower is better)
Translates to: VTSNLEQSSFWEVGADAEDSRNW*SGSGSR
Trigger: CCTGGATCCACTTCCACTCCACCAGTTCCTGGAATC...TTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR CCA 90 bp AAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTTAGGAACTCCTCTGTaGGTCGTGTGTGCCGTGAGA +
Preference number: 2 (lower is better)
Translates to: KLVVSQDIVCFPRGLCDPLGTPL*VVCAVR
Trigger: TCTCACGGCACACACGACCCACAGAGGAGTTCCTAA...AGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR TCA 90 bp GAAGAAACTCTAGATGGGACCAATGGACACCAAGTCCATTTTGTGTTTTTCTGCGGGGGAGAGGGCAGCTaGGTTGACAGGACGTTCTGT +
Preference number: 2 (lower is better)
Translates to: EETLDGTNGHQVHFVFFCGGEGS*VDRTFC
Trigger: ACAGAACGTCCTGTCAACTCAGCTGCCCTCTCCCCC...GCAGAAAAACACAAAATGGACTTGGTGTCCATTGGTCCCATCTAGAGTTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679270.1
3UTR-3UTR TCA 90 bp CCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTTCTCTCCCATCAGACTaGGGAATCCTCAAAGCTAAG +
Preference number: 2 (lower is better)
Translates to: PQGMLCCSHQTGVHQGCCSLPSD*GILKAK
Trigger: CTTAGCTTTGAGGATTCCTCAGTCTGATGGGAGAGA...ACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp TCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTACATCAAGGGTGTTGTaGTACTTCCATCAAATTGGT +
Preference number: 2 (lower is better)
Translates to: SCQTGAPQGMLCCSHQTGTSRVL*YFHQIG
Trigger: ACCAATTTGATGGAAGTATCACAACACCCTTGATGT...ACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp GACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAACATCAAGGGTGTTGTaGTACTTCCATCAAATTGGT +
Preference number: 2 (lower is better)
Translates to: DRGSPGNAMLLPSDWCTSTSRVL*YFHQIG
Trigger: ACCAATTTGATGGAAGTATCACAACACCCTTGATGT...TGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp GGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGGGTGGGAGTGTCGAGTATaGAATGGGAGGACAGATGAG +
Preference number: 2 (lower is better)
Translates to: GRTDEATDKLRLYPQGSGWECRV*NGRTDE
Trigger: CTCATCTGTCCTCCCATTTCATACTCGACACTCCCA...CCCACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp CTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCTCATCCTGGACCCCTTaGGCAAGACCATGGCTGGAT +
Preference number: 2 (lower is better)
Translates to: LCCSHQTGVHQGCCDTSISSWTP*ARPWLD
Trigger: ATCCAGCCATGGTCTTGCTCAAGGGGTCCAGGATGA...GATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR TCA 90 bp AAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCACAGCACCCTGCTTGTaGCTTCACTGGCCCAACTCA +
Preference number: 2 (lower is better)
Translates to: KVKPWMGSTNVLWYGGSVTAPCL*LHWPNS
Trigger: TGAGTTGGGCCAGTGAAGTCACAAGCAGGGTGCTGT...GACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR CCA 90 bp AATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTATTCTATTCCTGGCCTaGTACATGGGGCTGAAGGCA +
Preference number: 2 (lower is better)
Translates to: NWWFPRTLCVSPEGYVTLILFLA*YMGLKA
Trigger: TGCCTTCAGCCCCATGTACCAGGCCAGGAATAGAAT...AAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR CAA 90 bp AAGGGTGTTGTGATACTTCCATCAAATTGGTGGTTTCCCAGGACATaGTGTGTTTCCCCAGAGGGCTATGTGACCCTTCCCCAGGTACTT +
Preference number: 2 (lower is better)
Translates to: KGVVILPSNWWFPRT*CVSPEGYVTLPQVL
Trigger: AAGTACCTGGGGAAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGTATCACAACACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp AAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTCTCTCCCATCAGACTaGGGAATCCTCAAAGCTAAG +
Preference number: 2 (lower is better)
Translates to: KLVVSQDIVCFPRGLCDPSLPSD*GILKAK
Trigger: CTTAGCTTTGAGGATTCCTCAGTCTGATGGGAGAGA...AGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp AATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTTTTCTCAAAGGGTCTTaGGTCTCTCCCATCAGACTG +
Preference number: 2 (lower is better)
Translates to: NWWFPRTLCVSPEGYVTLFLKGS*VSPIRL
Trigger: CAGTCTGATGGGAGAGACTCAAGACCCTTTGAGAAA...AAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp AAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGCAGTGGGCAGCCACTaGAGGCTTTTAAACAGAGCT +
Preference number: 2 (lower is better)
Translates to: KVKPWMGSTNVLWYGGSVAVGSH*RLLNRA
Trigger: AGCTCTGTTTAAAAGCCTTCAGTGGCTGCCCACTGC...GACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp AATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGTGGGAGTGTCGAGTATaGAATGGGAGGACAGATGAG +
Preference number: 2 (lower is better)
Translates to: NVLWYGGSVEYEMGGQMRWECRV*NGRTDE
Trigger: CTCATCTGTCCTCCCATTTCATACTCGACACTCCCA...CCTCATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR GCA 90 bp GGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGGGCAGGGAATGCTATGTTaGTCCCATCAGACTGGTGTA +
Preference number: 2 (lower is better)
Translates to: GRTDEATDKLRLYPQGSGQGMLC*SHQTGV
Trigger: TACACCAGTCTGATGGGAGCAACATAGCATTCCCTG...CCCACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR GCA 90 bp GAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTTGGTCTTGAGCACTTaGTCCCTGGCTGTACTTGGC +
Preference number: 2 (lower is better)
Translates to: EQFLGGRSRCRIPRELCFLVLST*SLAVLG
Trigger: GCCAAGTACAGCCAGGGAGCAAGTGCTCAAGACCAA...AAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAACTGCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR CCA 90 bp TGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGCTGGATTCCAGGAACTaGTGGAGTGGAAGTGGATCC +
Preference number: 2 (lower is better)
Translates to: WMGSTNVLWYGGSVEYEMLDSRN*WSGSGS
Trigger: GGATCCACTTCCACTCCACCAGTTCCTGGAATCCAG...CATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR CCA 90 bp ACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGGAGCAAGACCATGGCTaGATTCCAGGAACTGGTGGA +
Preference number: 2 (lower is better)
Translates to: TNVLWYGGSVEYEMGGQMEQDHG*IPGTGG
Trigger: TCCACCAGTTCCTGGAATCCAGCCATGGTCTTGCTC...CATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR CCA 90 bp GTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAAAGGGCTCTCAACCCCTaGATGCAAAACTGTGATTCA +
Preference number: 2 (lower is better)
Translates to: VTSNLEQSSFWEVGADAERALNP*MQNCDS
Trigger: TGAATCACAGTTTTGCATCCAGGGGTTGAGAGCCCT...TTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR GCA 90 bp GGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACGGAGGTAGGAGCAGATaGAGAATTCCAAGAGAACTG +
Preference number: 2 (lower is better)
Translates to: GQLMSFGMVGVSSMKWEDGGRSR*RIPREL
Trigger: CAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCC...GTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CCA 90 bp CCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGCTTCCATCAAATTGGTaGTTTCCCAGGACATTGTGT +
Preference number: 2 (lower is better)
Translates to: PRECYVAPIRLVYIKGVVLPSNW*FPRTLC
Trigger: ACACAATGTCCTGGGAAACCACCAATTTGATGGAAG...CACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CCA 90 bp GGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGGGTCAACTAATGTCCTTTaGTATGGTGGGAGTGTCGAG +
Preference number: 2 (lower is better)
Translates to: GRTDEATDKLRLYPQGSGSTNVL*YGGSVE
Trigger: CTCGACACTCCCACCATACCAAAGGACATTAGTTGA...CCCACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CCA 90 bp TTCTGGCAGGAGGTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGTCCCTTTTATCAGATaGGCTCTTTACAGGATTCTG +
Preference number: 2 (lower is better)
Translates to: FWQEVTSNLEQSSFWEVGVPFIR*ALYRIL
Trigger: CAGAATCCTGTAAAGAGCCCATCTGATAAAAGGGAC...TCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGACCTCCTGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR TCA 90 bp GGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTTTCTCAAAGGGTCTTaGGTCTCTCCCATCAGACTG +
Preference number: 2 (lower is better)
Translates to: GMLCCSHQTGVHQGCCDTFLKGS*VSPIRL
Trigger: CAGTCTGATGGGAGAGACTCAAGACCCTTTGAGAAA...AGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp AAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCTTTCTCAAAGGGTCTTaGGTCTCTCCCATCAGACTG +
Preference number: 2 (lower is better)
Translates to: KVKPWMGSTNVLWYGGSVFLKGS*VSPIRL
Trigger: CAGTCTGATGGGAGAGACTCAAGACCCTTTGAGAAA...GACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp CTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCTTTCTCAAAGGGTCTTaGGTCTCTCCCATCAGACTG +
Preference number: 2 (lower is better)
Translates to: LCCSHQTGVHQGCCDTSIFLKGS*VSPIRL
Trigger: CAGTCTGATGGGAGAGACTCAAGACCCTTTGAGAAA...GATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp GAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTTTTCAGGCCACAGTTaGCCATGGGTAACTGAAACC +
Preference number: 2 (lower is better)
Translates to: EQFLGGRSRCRIPRELCFFSGHS*PWVTET
Trigger: GGTTTCAGTTACCCATGGTCAACTGTGGCCTGAAAA...AAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAACTGCTC
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
3UTR-3UTR GCA 90 bp ATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGACAGGGAATGCTATGTTaGTCCCATCAGACTGGTGTA +
Preference number: 2 (lower is better)
Translates to: MGSTNVLWYGGSVEYEMGQGMLC*SHQTGV
Trigger: TACACCAGTCTGATGGGAGCAACATAGCATTCCCTG...TCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR GCA 90 bp AAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGGAGGTAGGAGCAGATaGAGAATTCCAAGAGAACTG +
Preference number: 2 (lower is better)
Translates to: KVKPWMGSTNVLWYGGSVGGRSR*RIPREL
Trigger: CAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCC...GACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CCA 90 bp CAGAAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTTTGCTCCCATCAGACTaGTGTACATCAAGGGTGTTG +
Preference number: 2 (lower is better)
Translates to: QKVKPWMGSTNVLWYGGSLLPSD*CTSRVL
Trigger: CAACACCCTTGATGTACACCAGTCTGATGGGAGCAA...ACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp GTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAAACATCAAGGGTGTTGTaGTACTTCCATCAAATTGGT +
Preference number: 2 (lower is better)
Translates to: VTSNLEQSSFWEVGADAETSRVL*YFHQIG
Trigger: ACCAATTTGATGGAAGTATCACAACACCCTTGATGT...TTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CCA 90 bp GAAGAAACTCTAGATGGGACCAATGGACACCAAGTCCATTTTGTGTTTTTCTGCTCTCACACGGCTCAATaGGAGGATACCAAAGGTAGG +
Preference number: 2 (lower is better)
Translates to: EETLDGTNGHQVHFVFFCSHTAQ*EDTKGR
Trigger: CCTACCTTTGGTATCCTCCCATTGAGCCGTGTGAGA...GCAGAAAAACACAAAATGGACTTGGTGTCCATTGGTCCCATCTAGAGTTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679270.1
3UTR-3UTR CCA 90 bp ACTTCCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTACTTCCATCAAATTGGTaGTTTCCCAGGACATTGTGT +
Preference number: 2 (lower is better)
Translates to: TSIKLVVSQDIVCFPRGLLPSNW*FPRTLC
Trigger: ACACAATGTCCTGGGAAACCACCAATTTGATGGAAG...TAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR TCA 90 bp GGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACACATCAAGGGTGTTGTaGTACTTCCATCAAATTGGT +
Preference number: 2 (lower is better)
Translates to: GSVEYEMGGQMRLQISLDTSRVL*YFHQIG
Trigger: ACCAATTTGATGGAAGTATCACAACACCCTTGATGT...GTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCATTTCATACTCGACACTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR GCA 90 bp TTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTCTTGTCAGGGAATGCTATGTTaGTCCCATCAGACTGGTGTA +
Preference number: 2 (lower is better)
Translates to: FLGGRSRCRIPRELCFSCQGMLC*SHQTGV
Trigger: TACACCAGTCTGATGGGAGCAACATAGCATTCCCTG...ACAAGAAAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CCA 90 bp TTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTCTTGTATACTTCCATCAAATTaGTGGTTTCCCAGGACATTG +
Preference number: 2 (lower is better)
Translates to: FLGGRSRCRIPRELCFSCILPSN*WFPRTL
Trigger: CAATGTCCTGGGAAACCACCAATTTGATGGAAGTAT...ACAAGAAAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR GCA 72 bp CACCGCCCAGAGGGCGTCCCCTGCAGGAGAGCTTCATaGGCCTGGTGGAGGCCTGTGGGGACTCGGAGCAAA +
Preference number: 3 (lower is better)
Translates to: HRPEGVPCRRAS*AWWRPVGTRSK
Trigger: TTTGCTCCGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGGGCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR CCA 72 bp CCAGAGGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTaGTGGAGGCCTGTGGGGACTCGGAGCAAAGCATGG +
Preference number: 3 (lower is better)
Translates to: PEGVPCRRASCA*WRPVGTRSKAW
Trigger: CCATGCTTTGCTCCGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR TCA 72 bp AAATTAGCCAGGCATGGTGGTGGGCGCCTGGGCCGCTaGGGCAGGAGAATGGCGTCAACCCGGGAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: KLARHGGGRLGR*GRRMASTREAE
Trigger: CTCTGCCTCCCGGGTTGACGCCATTCTCCTGCCTCAGCGGCCCAGGCGCCCACCACCATGCCTGGCTAATTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679270.1
3UTR GCA 72 bp AGGCAGGAGAATGGCGTCAACCCGGGAGGCAGAGCTTaGAGTGAGCAGAGATCACGCCACTGCGCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: RQENGVNPGGRA*SEQRSRHCAPA
Trigger: GGCTGGAGCGCAGTGGCGTGATCTCTGCTCACTGCAAGCTCTGCCTCCCGGGTTGACGCCATTCTCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679270.1
3UTR CCA 72 bp CCTGCAGGAGAGCTTCATGCGCCTGGTGGAGGCCTGTaGGGACTCGGAGCAAAGCATGGACAACTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: PAGELHAPGGGL*GLGAKHGQLAE
Trigger: CTCAGCCAGTTGTCCATGCTTTGCTCCGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR TCA 72 bp CCCAGCCACCCAGGAGGCAGAGGCAGGATAATTGCTTaGACCCGGGAAGCAGAGGTTGCAGTGAGCAGAGAT +
Preference number: 3 (lower is better)
Translates to: PSHPGGRGRIIA*TREAEVAVSRD
Trigger: ATCTCTGCTCACTGCAACCTCTGCTTCCCGGGTTCAAGCAATTATCCTGCCTCTGCCTCCTGGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679270.1
3UTR-3UTR CAA 90 bp GACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCATGGTTTCCCAGGACATaGTGTGTTTCCCCAGAGGGC +
Preference number: 3 (lower is better)
Translates to: DRGSPGNAMLLPSDWCTSWFPRT*CVSPEG
Trigger: GCCCTCTGGGGAAACACACAATGTCCTGGGAAACCA...TGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR GCA 72 bp GGGGATGATCAGACACTTCTGCCACCTCCTGCTGGCTaGCCTGGGGCTATTCAATCCTTCCAGCTTTGTCAC +
Preference number: 3 (lower is better)
Translates to: GDDQTLLPPPAG*PGAIQSFQLCH
Trigger: GTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCTGATCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
3UTR CCA 72 bp CCAACTCATCCTGGACCCCTTGAGCAAGACCATGGCTaGATTCCAGGAACTGGTGGAGTGGAAGTGGATCCA +
Preference number: 3 (lower is better)
Translates to: PTHPGPLEQDHG*IPGTGGVEVDP
Trigger: TGGATCCACTTCCACTCCACCAGTTCCTGGAATCCAGCCATGGTCTTGCTCAAGGGGTCCAGGATGAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR GCA 72 bp TCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTaGTCCCATCAGACTGGTGTACATCAAGGGTGTTGT +
Preference number: 3 (lower is better)
Translates to: SCQTGAPQGMLC*SHQTGVHQGCC
Trigger: ACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CAA 90 bp TTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTCCCCAGGGAATGCTATGTaGCTCCCATCAGACTGGTGT +
Preference number: 3 (lower is better)
Translates to: LVVSQDIVCFPRGLCDPSPGNAM*LPSDWC
Trigger: ACACCAGTCTGATGGGAGCAACATAGCATTCCCTGG...GGAAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CAA 90 bp GCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTCCAGGGAATGCTATGTaGCTCCCATCAGACTGGTGT +
Preference number: 3 (lower is better)
Translates to: APQGMLCCSHQTGVHQGCPGNAM*LPSDWC
Trigger: ACACCAGTCTGATGGGAGCAACATAGCATTCCCTGG...ACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR CCA 72 bp CTCATTGGTCTTGAGCACTTGCTCCCTGGCTGTACTTaGCAAGGGCTTGAGCTGGAAAAGATGACCAGACTC +
Preference number: 3 (lower is better)
Translates to: LIGLEHLLPGCT*QGLELEKMTRL
Trigger: GAGTCTGGTCATCTTTTCCAGCTCAAGCCCTTGCCAAGTACAGCCAGGGAGCAAGTGCTCAAGACCAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR CCA 72 bp AACGAGACGCTGTCTCAAAGATTAGGAACTCCTCTGTaGGTCGTGTGTGCCGTGAGACTGGACTCCCTAAAG +
Preference number: 3 (lower is better)
Translates to: NETLSQRLGTPL*VVCAVRLDSLK
Trigger: CTTTAGGGAGTCCAGTCTCACGGCACACACGACCCACAGAGGAGTTCCTAATCTTTGAGACAGCGTCTCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR-3UTR CAA 90 bp CCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGTGGTTTCCCAGGACATaGTGTGTTTCCCCAGAGGGC +
Preference number: 3 (lower is better)
Translates to: PSNWWFPRTLCVSPEGYVWFPRT*CVSPEG
Trigger: GCCCTCTGGGGAAACACACAATGTCCTGGGAAACCA...CACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CAA 90 bp CCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGCCAGGGAATGCTATGTaGCTCCCATCAGACTGGTGT +
Preference number: 3 (lower is better)
Translates to: PSNWWFPRTLCVSPEGYVPGNAM*LPSDWC
Trigger: ACACCAGTCTGATGGGAGCAACATAGCATTCCCTGG...CACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CAA 90 bp AATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGTCTCCCTCATTGGTCTaGAGCACTTGCTCCCTGGCT +
Preference number: 3 (lower is better)
Translates to: NVLWYGGSVEYEMGGQMRSPSLV*STCSLA
Trigger: AGCCAGGGAGCAAGTGCTCAAGACCAATGAGGGAGA...CCTCATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678711.1
3UTR CCA 72 bp TGTTGTAGCCCAACTTCTGGACAAGCATCTAGAACTTaGAAGCTTCCTGAGGCTTCAGCAGGAAGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: CCSPTSGQASRT*KLPEASAGRQV
Trigger: CACCTGCCTTCCTGCTGAAGCCTCAGGAAGCTTCCAAGTTCTAGATGCTTGTCCAGAAGTTGGGCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679270.1
3UTR-3UTR CAA 90 bp GGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTGGTTTCCCAGGACATaGTGTGTTTCCCCAGAGGGC +
Preference number: 3 (lower is better)
Translates to: GMLCCSHQTGVHQGCCDTWFPRT*CVSPEG
Trigger: GCCCTCTGGGGAAACACACAATGTCCTGGGAAACCA...AGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CAA 90 bp ACTTCCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTACCAGGGAATGCTATGTaGCTCCCATCAGACTGGTGT +
Preference number: 3 (lower is better)
Translates to: TSIKLVVSQDIVCFPRGLPGNAM*LPSDWC
Trigger: ACACCAGTCTGATGGGAGCAACATAGCATTCCCTGG...TAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR CCA 72 bp CAGGAGGTCACCAGTAACCTTGAACAGAGCAGTTTCTaGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAAC +
Preference number: 3 (lower is better)
Translates to: QEVTSNLEQSSF*EVGADAEFQEN
Trigger: GTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGACCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CAA 90 bp GAAATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCATGGTTTCCCAGGACATaGTGTGTTTCCCCAGAGGGC +
Preference number: 3 (lower is better)
Translates to: EMGGQMRLQISLDFILKAWFPRT*CVSPEG
Trigger: GCCCTCTGGGGAAACACACAATGTCCTGGGAAACCA...TGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR CCA 72 bp GCCCAGGACCACCTGAATGGAAGAAGAAACTCTAGATaGGACCAATGGACACCAAGTCCATTTTGTGTTTTT +
Preference number: 3 (lower is better)
Translates to: AQDHLNGRRNSR*DQWTPSPFCVF
Trigger: AAAAACACAAAATGGACTTGGTGTCCATTGGTCCCATCTAGAGTTTCTTCTTCCATTCAGGTGGTCCTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
3UTR CCA 72 bp GTGTACATCAAGGGTGTTGTGATACTTCCATCAAATTaGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAG +
Preference number: 3 (lower is better)
Translates to: VYIKGVVILPSN*WFPRTLCVSPE
Trigger: CTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGTATCACAACACCCTTGATGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR CCA 72 bp AAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTaGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGA +
Preference number: 3 (lower is better)
Translates to: KVKPWMGSTNVL*YGGSVEYEMGG
Trigger: TCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
3UTR-3UTR CAA 90 bp GGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTGATACTTCCATCAAATaGGTGGTTTCCCAGGACATT +
Preference number: 3 (lower is better)
Translates to: GMLCCSHQTGVHQGCCDTDTSIK*VVSQDI
Trigger: AATGTCCTGGGAAACCACCAATTTGATGGAAGTATC...AGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp CCCAGAGGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTGGTGGAGGCCTGTGGGCCAGAGGGCGTCCCCTaGAGGAGAGCTTCATGCGCC +
Preference number: 4 (lower is better)
Translates to: PRGRPLQESFMRLVEACGPEGVP*RRASCA
Trigger: GGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGG...CCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CCA 90 bp CCCAGAGGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTGGTGGAGGCCTGTGGGACTGCGTGTGGCAGCTaGGCTGCCGGTTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: PRGRPLQESFMRLVEACGTACGS*AAGSHC
Trigger: ACAGTGGGAACCGGCAGCCCAGCTGCCACACGCAGT...CCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CCA 90 bp GGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTGGTGGAGGCCTGTGGGGACTCGCCTGGTGGAGGCCTGTaGGGACTCGGAGCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: GRPLQESFMRLVEACGDSPGGGL*GLGAKH
Trigger: ATGCTTTGCTCCGAGTCCCCACAGGCCTCCACCAGG...CGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR TCA 90 bp CCCAGAGGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTGGTGGAGGCCTGTGGGACAGCACCCTGCTTGTaGCTTCACTGGCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: PRGRPLQESFMRLVEACGTAPCL*LHWPNS
Trigger: TGAGTTGGGCCAGTGAAGTCACAAGCAGGGTGCTGT...CCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CCA 90 bp GGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTGGTGGAGGCCTGTGGGGACTCGCTCCCTGGCTGTACTTaGCAAGGGCTTGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GRPLQESFMRLVEACGDSLPGCT*QGLELE
Trigger: TTCCAGCTCAAGCCCTTGCCAAGTACAGCCAGGGAG...CGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR TCA 90 bp GACCAGACTCCCACCGCCCAGAGGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTATCCAGGAAAGTAAGTaGCCACCCAACCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: DQTPTAQRASPAGELHAPIQESK*PPNPSL
Trigger: AAGGCTGGGGTTGGGTGGTCACTTACTTTCCTGGAT...AGGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGGGCGGTGGGAGTCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR TCA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCGGGCGCCTGGGCCGCTaGGGCAGGAGAATGGCGTCA +
Preference number: 4 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLGRLGR*GRRMAS
Trigger: TGACGCCATTCTCCTGCCTCAGCGGCCCAGGCGCCC...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR GCA 90 bp TCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCGTGCCCATTGCTCTaGCCCCTCCCCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SDRGSPGNAMLLPSDWCTSCPLL*PLPRPA
Trigger: GGCTGGCCTGGGGAGGGGGCAGAGCAATGGGCACGA...TGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CCA 90 bp GACCAGACTCCCACCGCCCAGAGGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTTTAGGAACTCCTCTGTaGGTCGTGTGTGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: DQTPTAQRASPAGELHAPLGTPL*VVCAVR
Trigger: TCTCACGGCACACACGACCCACAGAGGAGTTCCTAA...AGGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGGGCGGTGGGAGTCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CCA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCAGCCAGGCATGGTGGTaGGCGCCTGGGCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLSQAWW*APGPLR
Trigger: CCTCAGCGGCCCAGGCGCCCACCACCATGCCTGGCT...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR TCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGGCTTCATCCCGGCTGTaGCGCGAGGAAGGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: TSATSCWLPWGYSILPALASSRL*REEGRN
Trigger: GTTGCGGCCTTCCTCGCGTCACAGCCGGGATGAAGC...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676998.1
CDS-3UTR TCA 90 bp GAAAGGCAGAGACCCAACCCAGGCTTAGGTCAGCTGCTTCACTGGTACCCTACCGCTTCATCCCGGCTGTaGCGCGAGGAAGGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: ERQRPNPGLGQLLHWYPTASSRL*REEGRN
Trigger: GTTGCGGCCTTCCTCGCGTCACAGCCGGGATGAAGC...GGTAGGGTACCAGTGAAGCAGCTGACCTAAGCCTGGGTTGGGTCTCTGCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677540.1
CDS-3UTR TCA 90 bp AGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCGCTTCATCCCGGCTGTaGCGCGAGGAAGGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: RPGLPRECYVAPIRLVYIASSRL*REEGRN
Trigger: GTTGCGGCCTTCCTCGCGTCACAGCCGGGATGAAGC...GATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678063.1
ENST00000678150.1
CDS-3UTR GCA 90 bp CGCCCAGAGGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTGGTGGAGGCCTGTGTTGATCTGCCGGGAGTaGTCCTTAACATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: RPEGVPCRRASCAWWRPVLICRE*SLTFTN
Trigger: GTTGGTGAATGTTAAGGAGCACTCCCGGCAGATCAA...CACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR GCA 90 bp TGTGGGGACTCGGAGCAAAGCATGGACAACTGGCTGAGTCGGCTGGACGGCTGCTCTGTGGGTCGTGTGTaGCGTGAGACTGGACTCCCT +
Preference number: 4 (lower is better)
Translates to: CGDSEQSMDNWLSRLDGCSVGRV*RETGLP
Trigger: AGGGAGTCCAGTCTCACGGCACACACGACCCACAGA...GCAGCCGTCCAGCCGACTCAGCCAGTTGTCCATGCTTTGCTCCGAGTCCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CCA 90 bp TCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCAATTAGCCAGGCATGGTaGTGGGCGCCTGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SATSCWLPWGYSILPALSISQAW*WAPGPL
Trigger: CAGCGGCCCAGGCGCCCACCACCATGCCTGGCTAAT...TGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR TCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCGGGGGAGAGGGCAGCTaGGTTGACAGGACGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSGGEGS*VDRTFC
Trigger: ACAGAACGTCCTGTCAACTCAGCTGCCCTCTCCCCC...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp TTAGGAACTCCTCTGTGGGTCGTGTGTGCCGTGAGACTGGACTCCCTAAAGGGCCTCCTCTTCCTGGACTaGGTGTGGCAGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGTPLWVVCAVRLDSLKGLLFLD*VWQLGC
Trigger: GCAGCCCAGCTGCCACACGCAGTCCAGGAAGAGGAG...GCCCTTTAGGGAGTCCAGTCTCACGGCACACACGACCCACAGAGGAGTTCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR GCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCCCACCTCCTGCTGGCTaGCCTGGGGCTATTCAATCC +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSPPPAG*PGAIQS
Trigger: GGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGG...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp GACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTACTTCTGCCACCTCCTaGTGGCTGCCCTGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: DTSATSCWLPWGYSILPATSATS*WLPWGY
Trigger: ATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT...AGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCACTTCTGCCACCTCCTaGTGGCTGCCCTGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSTSATS*WLPWGY
Trigger: ATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCCCGGGAGGCAGAGCTTaGAGTGAGCAGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSPGGRA*SEQRSR
Trigger: GCGTGATCTCTGCTCACTGCAAGCTCTGCCTCCCGG...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CCA 90 bp TTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTTCCTGGACTGCGTGTaGCAGCTGGGCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: FLSDRGSPGNAMLLPSDWFLDCV*QLGCRF
Trigger: GAACCGGCAGCCCAGCTGCCACACGCAGTCCAGGAA...CCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATTCCTGGACTGCGTGTaGCAGCTGGGCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SDRGSPGNAMLLPSDWCTFLDCV*QLGCRF
Trigger: GAACCGGCAGCCCAGCTGCCACACGCAGTCCAGGAA...TGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCTCTCATGGCCAGCGATaGTGCACTCCCCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLSHGQR*CTPPGV
Trigger: GACCCCTGGGGGAGTGCATCATCGCTGGCCATGAGA...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR TCA 90 bp TTACTCTGGGAAAGGCAGAGACCCAACCCAGGCTTAGGTCAGCTGCTTCACTGGTCTCATGGCCAGCGATaGTGCACTCCCCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LLWERQRPNPGLGQLLHWSHGQR*CTPPGV
Trigger: GACCCCTGGGGGAGTGCATCATCGCTGGCCATGAGA...CCAGTGAAGCAGCTGACCTAAGCCTGGGTTGGGTCTCTGCCTTTCCCAGAGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR TCA 90 bp AGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCGGGGGAGAGGGCAGCTaGGTTGACAGGACGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RPGLPRECYVAPIRLVYIGGEGS*VDRTFC
Trigger: ACAGAACGTCCTGTCAACTCAGCTGCCCTCTCCCCC...GATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGGGGGGAGAGGGCAGCTaGGTTGACAGGACGTTCTGT +
Preference number: 4 (lower is better)
Translates to: FLSDRGSPGNAMLLPSDWGGEGS*VDRTFC
Trigger: ACAGAACGTCCTGTCAACTCAGCTGCCCTCTCCCCC...CCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCAGGTAGAAGGATCGCTTaGGCCCAGGAGGTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: SATSCWLPWGYSILPALSGRRIA*AQEVAV
Trigger: CACCGCAACCTCCTGGGCTCAAGCGATCCTTCTACC...TGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR GCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCCATCTTCGCCGCCGCTaGTGTAGCTCTTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSHLRRR*CSSCHQ
Trigger: CTGATGGCAAGAGCTACAGCAGCGGCGGCGAAGATG...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp TCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTGTGGCAGCTGGGCTaGCGGTTCCCACTGTCATTG +
Preference number: 4 (lower is better)
Translates to: SCQTGAPQGMLCCSHQTGVWQLG*RFPLSL
Trigger: CAATGACAGTGGGAACCGGCAGCCCAGCTGCCACAC...ACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAGTGTGGCAGCTGGGCTaGCGGTTCCCACTGTCATTG +
Preference number: 4 (lower is better)
Translates to: DRGSPGNAMLLPSDWCTSVWQLG*RFPLSL
Trigger: CAATGACAGTGGGAACCGGCAGCCCAGCTGCCACAC...TGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGCCACCTCCTGCTGGCTaGCCTGGGGCTATTCAATCC +
Preference number: 4 (lower is better)
Translates to: TSATSCWLPWGYSILPALPPPAG*PGAIQS
Trigger: GGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGG...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTGAGCCCAGGAGGTTaGGGTGAGCAGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSLSPGG*GEQRWC
Trigger: GCACCATCTCTGCTCACCGCAACCTCCTGGGCTCAA...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CCA 90 bp CGCCGCCGCTGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACGTAATGGACCGCTCATaGCCCTGCAGTAGGATCGGC +
Preference number: 4 (lower is better)
Translates to: RRRCCSWKKIARHQSGAYVMDRS*PCSRIG
Trigger: GCCGATCCTACTGCAGGGCCATGAGCGGTCCATTAC...GTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCAGCGGCGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CCA 90 bp TCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCAAAAATTAGCCAGGCATaGTGGTGGGCGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SATSCWLPWGYSILPALSKISQA*WWAPGP
Trigger: CGGCCCAGGCGCCCACCACCATGCCTGGCTAATTTT...TGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCAGCAGCCAGGGACGGTaGCCATGTACCTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSSSQGR*PCTCNP
Trigger: GGGATTACAGGTACATGGCCACCGTCCCTGGCTGCT...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCCCATGTTGGCCAGGCTaGTTACGAACTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSPCWPG*LRTPGL
Trigger: GAGGCCAGGAGTTCGTAACCAGCCTGGCCAACATGG...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR TCA 90 bp TCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCAAGAGGGCAGCTGAGTTaGCAGGACGTTCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: SATSCWLPWGYSILPALSRGQLS*QDVLSG
Trigger: TCCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCT...TGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR TCA 90 bp GAAAGGCAGAGACCCAACCCAGGCTTAGGTCAGCTGCTTCACTGGTACCCTACCAGAGGGCAGCTGAGTTaGCAGGACGTTCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: ERQRPNPGLGQLLHWYPTRGQLS*QDVLSG
Trigger: TCCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCT...GGTAGGGTACCAGTGAAGCAGCTGACCTAAGCCTGGGTTGGGTCTCTGCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677540.1
CDS-3UTR TCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGAGAGGGCAGCTGAGTTaGCAGGACGTTCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: TSATSCWLPWGYSILPALRGQLS*QDVLSG
Trigger: TCCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCT...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR TCA 90 bp TTACTCTGGGAAAGGCAGAGACCCAACCCAGGCTTAGGTCAGCTGCTTCACTGGGGGGGAGAGGGCAGCTaGGTTGACAGGACGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LLWERQRPNPGLGQLLHWGGEGS*VDRTFC
Trigger: ACAGAACGTCCTGTCAACTCAGCTGCCCTCTCCCCC...CCAGTGAAGCAGCTGACCTAAGCCTGGGTTGGGTCTCTGCCTTTCCCAGAGTAA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR TCA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCGGGGGAGAGGGCAGCTaGGTTGACAGGACGTTCTGT +
Preference number: 4 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLGGEGS*VDRTFC
Trigger: ACAGAACGTCCTGTCAACTCAGCTGCCCTCTCCCCC...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR TCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGGCTTCATCCCGGCTGTaGCGCGAGGAAGGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTASSRL*REEGRN
Trigger: GTTGCGGCCTTCCTCGCGTCACAGCCGGGATGAAGC...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR TCA 90 bp CCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGCTTCATCCCGGCTGTaGCGCGAGGAAGGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: PQGMLCCSHQTGVHQGCCASSRL*REEGRN
Trigger: GTTGCGGCCTTCCTCGCGTCACAGCCGGGATGAAGC...ACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678063.1
ENST00000678150.1
CDS-3UTR TCA 90 bp TCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCAAGGCAGAGCTTGCAGTaGGCAGAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: SATSCWLPWGYSILPALSRQSLQ*AEITPL
Trigger: CAGTGGCGTGATCTCTGCTCACTGCAAGCTCTGCCT...TGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR TCA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCGGACAGAGGATTGCTTaGGCCCAGGAGTTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLGQRIA*AQEFEA
Trigger: GGCCTCGAACTCCTGGGCTCAAGCAATCCTCTGTCC...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR GCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGCATCTTCGCCGCCGCTaGTGTAGCTCTTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: TSATSCWLPWGYSILPALHLRRR*CSSCHQ
Trigger: CTGATGGCAAGAGCTACAGCAGCGGCGGCGAAGATG...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCATGATCAGACACTTCTaGCACCTCCTGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSMIRHF*HLLLAA
Trigger: GGCAGCCAGCAGGAGGTGGCAGAAGTGTCTGATCAT...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp CTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTCCAGAGGGCGTCCCCTaGAGGAGAGCTTCATGCGCC +
Preference number: 4 (lower is better)
Translates to: LPRECYVAPIRLVYIKGVPEGVP*RRASCA
Trigger: GGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGG...AACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp TTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTCTGTGGGTCGTGTGTaGCGTGAGACTGGACTCCCT +
Preference number: 4 (lower is better)
Translates to: FLSDRGSPGNAMLLPSDWSVGRV*RETGLP
Trigger: AGGGAGTCCAGTCTCACGGCACACACGACCCACAGA...CCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp CTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGCAGAGATCGCGCCATTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LLLAALGLFNPSSFVTPLQRSRH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCTG...CAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGGTAATGGACCGCTCATaGCCCTGCAGTAGGATCGGC +
Preference number: 4 (lower is better)
Translates to: TSATSCWLPWGYSILPALVMDRS*PCSRIG
Trigger: GCCGATCCTACTGCAGGGCCATGAGCGGTCCATTAC...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CCA 90 bp TCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACAGTAATGGACCGCTCATaGCCCTGCAGTAGGATCGGC +
Preference number: 4 (lower is better)
Translates to: SDRGSPGNAMLLPSDWCTVMDRS*PCSRIG
Trigger: GCCGATCCTACTGCAGGGCCATGAGCGGTCCATTAC...TGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCGCTTTGTCACTCCTCTaGGCATCTCCTCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSALSLL*ASPLCL
Trigger: CAGGCAGAGAGGAGATGCCCAGAGGAGTGACAAAGC...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CCA 90 bp AGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCCAAAGCATGGACAACTaGCTGAGTCGGCTGGACGGC +
Preference number: 4 (lower is better)
Translates to: RPGLPRECYVAPIRLVYIQSMDN*LSRLDG
Trigger: GCCGTCCAGCCGACTCAGCCAGTTGTCCATGCTTTG...GATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCCAGGGTGGAGTACAGTaGCGCAATCTCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSQGGVQ*RNLGSL
Trigger: CAGTGAACCGAGATTGCGCCACTGTACTCCACCCTG...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR TCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGTCTCATGGCCAGCGATaGTGCACTCCCCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTSHGQR*CTPPGV
Trigger: GACCCCTGGGGGAGTGCATCATCGCTGGCCATGAGA...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR TCA 90 bp TTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTCCGGGGGAGAGGGCAGCTaGGTTGACAGGACGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LVVSQDIVCFPRGLCDPSGGEGS*VDRTFC
Trigger: ACAGAACGTCCTGTCAACTCAGCTGCCCTCTCCCCC...GGAAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCACCAAAGGTAGGGGATaGTCAGACACTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSTKGRG*SDTSAT
Trigger: GGTGGCAGAAGTGTCTGATCATCCCCTACCTTTGGT...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp CGCCGCCGCTGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACACCTGGCCTCAAACTTaGCAATCCTGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RRRCCSWKKIARHQSGAYTWPQT*QSWWRL
Trigger: CAACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGT...GTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCAGCGGCGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678883.1
CDS-3UTR GCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGCTCCTCTTCCTGGACTaGGTGTGGCAGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTLLFLD*VWQLGC
Trigger: GCAGCCCAGCTGCCACACGCAGTCCAGGAAGAGGAG...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR GCA 90 bp CCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGCTCCTCTTCCTGGACTaGGTGTGGCAGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PRECYVAPIRLVYIKGVVLLFLD*VWQLGC
Trigger: GCAGCCCAGCTGCCACACGCAGTCCAGGAAGAGGAG...CACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp TCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCAATGATCAGACACTTCTaGCACCTCCTGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SATSCWLPWGYSILPALSMIRHF*HLLLAA
Trigger: GGCAGCCAGCAGGAGGTGGCAGAAGTGTCTGATCAT...TGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp GACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAGGGCTCCCCAGGGAATaGTATGTTGCTCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: DRGSPGNAMLLPSDWCTSGLPRE*YVAPIR
Trigger: TCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCC...TGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp TTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTCCTGCAGGAGAGCTTCATaGGCCTGGTGGAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LVVSQDIVCFPRGLCDPSCRRAS*AWWRPV
Trigger: CACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCA...GGAAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp AACATGGTGAAACCTAACAATGCAAAAACTAGCTGGGTGTGGTGGCGGTCGCCTCCAGAGGGCGTCCCCTaGAGGAGAGCTTCATGCGCC +
Preference number: 4 (lower is better)
Translates to: NMVKPNNAKTSWVWWRSPPEGVP*RRASCA
Trigger: GGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGG...AGGCGACCGCCACCACACCCAGCTAGTTTTTGCATTGTTAGGTTTCACCATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TTTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGACTGTTGGCGCTGTTTaGGCACGCCTATGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FLVRPGLPRECYVAPIRLTVGAV*ARLCLL
Trigger: GAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGT...CAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGACTGCGTGTGGCAGCTaGGCTGCCGGTTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTTACGS*AAGSHC
Trigger: ACAGTGGGAACCGGCAGCCCAGCTGCCACACGCAGT...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGTTCCTGGACTGCGTGTaGCAGCTGGGCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTFLDCV*QLGCRF
Trigger: GAACCGGCAGCCCAGCTGCCACACGCAGTCCAGGAA...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CCA 90 bp GACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTCAGCAGGAAGGCAGGTaGGGTTCTCTTACATGGTCA +
Preference number: 4 (lower is better)
Translates to: DTSATSCWLPWGYSILPAQQEGR*GSLTWS
Trigger: TGACCATGTAAGAGAACCCCACCTGCCTTCCTGCTG...AGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCCTGCTGGCTGCCCTaGGGCTATTCAATCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TSATSCWLPWGYSILPALSCWLP*GYSILP
Trigger: TGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGA...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CCA 90 bp TTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTCCAGAGCTTCATGCGCCTaGTGGAGGCCTGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: LVVSQDIVCFPRGLCDPSRASCA*WRPVGT
Trigger: AGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCT...GGAAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp CGCCGCCGCTGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACGTCAGGTGCTTACTCTaGGAAAGGCAGAGACCCAAC +
Preference number: 4 (lower is better)
Translates to: RRRCCSWKKIARHQSGAYVRCLL*ERQRPN
Trigger: GTTGGGTCTCTGCCTTTCCCAGAGTAAGCACCTGAC...GTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCAGCGGCGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CCA 90 bp GACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTAGCCTCCTGAGTGGTTaGGATTACAGATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DTSATSCWLPWGYSILPASLLSG*DYRCLA
Trigger: AGCCAGGCATCTGTAATCCCAACCACTCAGGAGGCT...AGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR TCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGGGGGGAGAGGGCAGCTaGGTTGACAGGACGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTGGEGS*VDRTFC
Trigger: ACAGAACGTCCTGTCAACTCAGCTGCCCTCTCCCCC...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR TCA 90 bp CCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGGGGGGAGAGGGCAGCTaGGTTGACAGGACGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PRECYVAPIRLVYIKGVVGGEGS*VDRTFC
Trigger: ACAGAACGTCCTGTCAACTCAGCTGCCCTCTCCCCC...CACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCAAACTTGGAAGCTTCCTaGGGCTTCAGCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SATSCWLPWGYSILPALSNLEAS*GFSRKA
Trigger: TGCCTTCCTGCTGAAGCCTCAGGAAGCTTCCAAGTT...TGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR TCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGACCAAAGGTAGGGGATaGTCAGACACTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: TSATSCWLPWGYSILPALTKGRG*SDTSAT
Trigger: GGTGGCAGAAGTGTCTGATCATCCCCTACCTTTGGT...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR TCA 90 bp GGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGAGCATGGACAACTGGCTaGGTCGGCTGGACGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSTNVLWYGGSVEYEMGGAWTTG*VGWTAA
Trigger: GGCAGCCGTCCAGCCGACTCAGCCAGTTGTCCATGC...TCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp AACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGGCATGGACAACTGGCTaGGTCGGCTGGACGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NHGWGQLMSFGMVGVSSMAWTTG*VGWTAA
Trigger: GGCAGCCGTCCAGCCGACTCAGCCAGTTGTCCATGC...CATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp ATACTTCCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCGCATGGACAACTGGCTaGGTCGGCTGGACGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ILPSNWWFPRTLCVSPEGAWTTG*VGWTAA
Trigger: GGCAGCCGTCCAGCCGACTCAGCCAGTTGTCCATGC...GCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTGAGAAGGGCCAGCTaGTTTCCTGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSLRRAS*FPVSQS
Trigger: GGACTGTGAAACAGGAAAGCAGCTGGCCCTTCTCAA...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp CGCCGCCGCTGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTTGAGAAGGGCCAGCTaGTTTCCTGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: RRRCCSWKKIARHQSGAYLRRAS*FPVSQS
Trigger: GGACTGTGAAACAGGAAAGCAGCTGGCCCTTCTCAA...GTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCAGCGGCGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR GCA 90 bp CTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGACCTGGCCTCAAACTTaGCAATCCTGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LLLAALGLFNPSSFVTPLTWPQT*QSWWRL
Trigger: CAACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGT...CAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGGTGTGGCAGCTGGGCTaGCGGTTCCCACTGTCATTG +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTVWQLG*RFPLSL
Trigger: CAATGACAGTGGGAACCGGCAGCCCAGCTGCCACAC...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR GCA 90 bp GTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAACTCCTCTTCCTGGACTaGGTGTGGCAGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VTSNLEQSSFWEVGADAELLFLD*VWQLGC
Trigger: GCAGCCCAGCTGCCACACGCAGTCCAGGAAGAGGAG...TTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp AAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGAAAGGCAGAGACCCAACCCAGGCACCAGTCAGGTaGTTACTCTGGGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KIARHQSGAYSGKGRDPTQAPVR*LLWERQ
Trigger: CTGCCTTTCCCAGAGTAAGCACCTGACTGGTGCCTG...GGTTGGGTCTCTGCCTTTCCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGGGGAAGGGCTACTGTTaGCGCTGTTTGGGCACGCCT +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTGKGYC*RCLGTP
Trigger: AGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCC...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CCA 90 bp CCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGGGAAGGGCTACTGTTaGCGCTGTTTGGGCACGCCT +
Preference number: 4 (lower is better)
Translates to: PQGMLCCSHQTGVHQGCCGKGYC*RCLGTP
Trigger: AGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCC...ACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGGTTCCCACTGTCATTaGAGTTTGGGGAAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: SCQTGAPQGMLCCSHQTGGSHCH*SLGKGY
Trigger: GTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACC...ACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAATTCCTGGACTGCGTGTaGCAGCTGGGCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: VTSNLEQSSFWEVGADAEFLDCV*QLGCRF
Trigger: GAACCGGCAGCCCAGCTGCCACACGCAGTCCAGGAA...TTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCTCCTGCTGGCTGCCCTaGGGCTATTCAATCCTTCCA +
Preference number: 4 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLSCWLP*GYSILP
Trigger: TGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGA...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CCA 90 bp CCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGCCTGGTGGAGGCCTGTaGGGACTCGGAGCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: PRECYVAPIRLVYIKGVVPGGGL*GLGAKH
Trigger: ATGCTTTGCTCCGAGTCCCCACAGGCCTCCACCAGG...CACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGAGCTTCATGCGCCTGGTaGAGGCCTGTGGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: GSTNVLWYGGSVEYEMGGASCAW*RPVGTR
Trigger: CCGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGC...TCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TTTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGCTCCCTGGCTGTACTTaGCAAGGGCTTGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: FLVRPGLPRECYVAPIRLLPGCT*QGLELE
Trigger: TTCCAGCTCAAGCCCTTGCCAAGTACAGCCAGGGAG...CAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCAGGGGTTTCACCATGTTaGCCAGGCTGGTTACGAACT +
Preference number: 4 (lower is better)
Translates to: SATSCWLPWGYSILPALSGVSPC*PGWLRT
Trigger: AGTTCGTAACCAGCCTGGCCAACATGGTGAAACCCC...TGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR TCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGAGAGGGCAGCTGAGTTaGCAGGACGTTCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTRGQLS*QDVLSG
Trigger: TCCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCT...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR TCA 90 bp CCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTAGAGGGCAGCTGAGTTaGCAGGACGTTCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: PQGMLCCSHQTGVHQGCCRGQLS*QDVLSG
Trigger: TCCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCT...ACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGAAAGGGGGAGAGGGCAGCTaGGTTGACAGGACGTTCTGT +
Preference number: 4 (lower is better)
Translates to: CCSWKKIARHQSGAYSGKGGEGS*VDRTFC
Trigger: ACAGAACGTCCTGTCAACTCAGCTGCCCTCTCCCCC...TTTCCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR TCA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCAACTTGGAAGCTTCCTaGGGCTTCAGCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLNLEAS*GFSRKA
Trigger: TGCCTTCCTGCTGAAGCCTCAGGAAGCTTCCAAGTT...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR TCA 90 bp GGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGCAGTGGGCAGCCACTaGAGGCTTTTAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: GLPRECYVAPIRLVYIKGAVGSH*RLLNRA
Trigger: AGCTCTGTTTAAAAGCCTTCAGTGGCTGCCCACTGC...ACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGGGAGTGTCGAGTATaGAATGGGAGGACAGATGAG +
Preference number: 4 (lower is better)
Translates to: FLSDRGSPGNAMLLPSDWWECRV*NGRTDE
Trigger: CTCATCTGTCCTCCCATTTCATACTCGACACTCCCA...CCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp GACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCATACTTGGCAAGGGCTTaGGCTGGAAAAGATGACCAG +
Preference number: 4 (lower is better)
Translates to: DRGSPGNAMLLPSDWCTSYLARA*AGKDDQ
Trigger: CTGGTCATCTTTTCCAGCTCAAGCCCTTGCCAAGTA...TGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp CTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTCTCCCTCATTGGTCTTaGGCACTTGCTCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPRECYVAPIRLVYIKGVLPHWS*ALAPWL
Trigger: CAGCCAGGGAGCAAGTGCTCAAGACCAATGAGGGAG...AACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp GTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAACCTGGTACATGGGGCTaGAGGCACAGACAGCACCCT +
Preference number: 4 (lower is better)
Translates to: VTSNLEQSSFWEVGADAEPGTWG*RHRQHP
Trigger: AGGGTGCTGTCTGTGCCTTCAGCCCCATGTACCAGG...TTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR GCA 90 bp TTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTTGAGAAGGGCCAGCTaGTTTCCTGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: FLSDRGSPGNAMLLPSDWLRRAS*FPVSQS
Trigger: GGACTGTGAAACAGGAAAGCAGCTGGCCCTTCTCAA...CCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp CTCTGGGAAAGGCAGAGACCCAACCCAGGCTTAGGTCAGCTGCTTCACTGGTACTTGAGAAGGGCCAGCTaGTTTCCTGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: LWERQRPNPGLGQLLHWYLRRAS*FPVSQS
Trigger: GGACTGTGAAACAGGAAAGCAGCTGGCCCTTCTCAA...GTACCAGTGAAGCAGCTGACCTAAGCCTGGGTTGGGTCTCTGCCTTTCCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR GCA 90 bp CGCCGCCGCTGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTTGATCTGCCGGGAGTaGTCCTTAACATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: RRRCCSWKKIARHQSGAYLICRE*SLTFTN
Trigger: GTTGGTGAATGTTAAGGAGCACTCCCGGCAGATCAA...GTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCAGCGGCGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR GCA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCACCTGGCCTCAAACTTaGCAATCCTGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLTWPQT*QSWWRL
Trigger: CAACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGT...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp AATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGCTCCTCTTCCTGGACTaGGTGTGGCAGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: NVLWYGGSVEYEMGGQMRLLFLD*VWQLGC
Trigger: GCAGCCCAGCTGCCACACGCAGTCCAGGAAGAGGAG...CCTCATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp CCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGTGCAGGAGAGCTTCATaGGCCTGGTGGAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PSNWWFPRTLCVSPEGYVCRRAS*AWWRPV
Trigger: CACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCA...CACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCACTCCATCCAGAAACTTaGTTCCTCGTGCCCATTGCT +
Preference number: 4 (lower is better)
Translates to: DRGSPGNAMLLPSDWCTSLHPET*FLVPIA
Trigger: AGCAATGGGCACGAGGAAGCAAGTTTCTGGATGGAG...TGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR GCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGCAGAGGCAGGATAATTaGTTGAACCCGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TSATSCWLPWGYSILPALQRQDN*LNPGSR
Trigger: TCTGCTTCCCGGGTTCAAGCAATTATCCTGCCTCTG...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR GCA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCCTGAGGACAGAGGATTaGTTGAGCCCAGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLLRTED*LSPGVR
Trigger: TCGAACTCCTGGGCTCAAGCAATCCTCTGTCCTCAG...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGGTAATGGACCGCTCATaGCCCTGCAGTAGGATCGGC +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTVMDRS*PCSRIG
Trigger: GCCGATCCTACTGCAGGGCCATGAGCGGTCCATTAC...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCATTGTTGTCAATCTaGCTCGGATCCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TSATSCWLPWGYSILPALSLLSI*LGSRRS
Trigger: TGACCTGCGGGATCCGAGCCAGATTGACAACAATGA...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676998.1
CDS-3UTR CCA 90 bp TCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCATGTGAGAATCTTCTCTaGCCTGGTTGGAGATCCACC +
Preference number: 4 (lower is better)
Translates to: SATSCWLPWGYSILPALSCENLL*PGWRST
Trigger: GGTGGATCTCCAACCAGGCCAGAGAAGATTCTCACA...TGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676998.1
CDS-3UTR CCA 90 bp CGCTGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGGGTCAGCTGCTTCACTaGTACCCTACCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: RCCSWKKIARHQSGAYSGGQLLH*YPTSCH
Trigger: ATGGCAAGAGGTAGGGTACCAGTGAAGCAGCTGACC...CCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CCA 90 bp AAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGAAAGGCAGAGACCCAACCGGTCAGCTGCTTCACTaGTACCCTACCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: KIARHQSGAYSGKGRDPTGQLLH*YPTSCH
Trigger: ATGGCAAGAGGTAGGGTACCAGTGAAGCAGCTGACC...GGTTGGGTCTCTGCCTTTCCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CCA 90 bp TCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACACTATGCCTCCTCTTTTaGCACCTTCCTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SDRGSPGNAMLLPSDWCTLCLLF*HLPLLP
Trigger: TGGCAAGAGAGGAAGGTGCCAAAAGAGGAGGCATAG...TGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGACTGTTGGCGCTGTTTaGGCACGCCTATGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTTVGAV*ARLCLL
Trigger: GAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGT...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CCA 90 bp GGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGGGGGGAAGGGCTACTGTTaGCGCTGTTTGGGCACGCCT +
Preference number: 4 (lower is better)
Translates to: GRTDEATDKLRLYPQGSGGKGYC*RCLGTP
Trigger: AGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCC...CCCACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACAACTGTCATTGGAGTTTaGGGAAGGGCTACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: SDRGSPGNAMLLPSDWCTTVIGV*GRATVG
Trigger: GCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGT...TGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAACTGTCATTGGAGTTTaGGGAAGGGCTACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: DRGSPGNAMLLPSDWCTSTVIGV*GRATVG
Trigger: GCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGT...TGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp ATACTTCCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCACTGCGTGTGGCAGCTaGGCTGCCGGTTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: ILPSNWWFPRTLCVSPEGTACGS*AAGSHC
Trigger: ACAGTGGGAACCGGCAGCCCAGCTGCCACACGCAGT...GCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACACTGCGTGTGGCAGCTaGGCTGCCGGTTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: GQLMSFGMVGVSSMKWEDTACGS*AAGSHC
Trigger: ACAGTGGGAACCGGCAGCCCAGCTGCCACACGCAGT...GTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp AATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGTTCCTGGACTGCGTGTaGCAGCTGGGCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: NVLWYGGSVEYEMGGQMRFLDCV*QLGCRF
Trigger: GAACCGGCAGCCCAGCTGCCACACGCAGTCCAGGAA...CCTCATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCCAGCAGGAAGGCAGGTaGGGTTCTCTTACATGGTCA +
Preference number: 4 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLQQEGR*GSLTWS
Trigger: TGACCATGTAAGAGAACCCCACCTGCCTTCCTGCTG...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CCA 90 bp CTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGTCTCACACGGCTCAATaGGAGGATACCAAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LLLAALGLFNPSSFVTPLSHTAQ*EDTKGR
Trigger: CCTACCTTTGGTATCCTCCCATTGAGCCGTGTGAGA...CAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CCA 90 bp AACATGGTGAAACCTAACAATGCAAAAACTAGCTGGGTGTGGTGGCGGTCGCCTCCTGGTGGAGGCCTGTaGGGACTCGGAGCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: NMVKPNNAKTSWVWWRSPPGGGL*GLGAKH
Trigger: ATGCTTTGCTCCGAGTCCCCACAGGCCTCCACCAGG...AGGCGACCGCCACCACACCCAGCTAGTTTTTGCATTGTTAGGTTTCACCATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTGCTTCATGCGCCTGGTaGAGGCCTGTGGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: EQFLGGRSRCRIPRELCFASCAW*RPVGTR
Trigger: CCGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGC...AAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTGCTTCATGCGCCTGGTaGAGGCCTGTGGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: GMLCCSHQTGVHQGCCDTASCAW*RPVGTR
Trigger: CCGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGC...AGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TTTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGTTAGGAACTCCTCTGTaGGTCGTGTGTGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: FLVRPGLPRECYVAPIRLLGTPL*VVCAVR
Trigger: TCTCACGGCACACACGACCCACAGAGGAGTTCCTAA...CAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TTACTCTGGGAAAGGCAGAGACCCAACCCAGGCTTAGGTCAGCTGCTTCACTGGGTCAGGTGCTTACTCTaGGAAAGGCAGAGACCCAAC +
Preference number: 4 (lower is better)
Translates to: LLWERQRPNPGLGQLLHWVRCLL*ERQRPN
Trigger: GTTGGGTCTCTGCCTTTCCCAGAGTAAGCACCTGAC...CCAGTGAAGCAGCTGACCTAAGCCTGGGTTGGGTCTCTGCCTTTCCCAGAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CCA 90 bp TCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATTTGGCACCTTCCTCTaGCCTCAAACTTGCCAATCC +
Preference number: 4 (lower is better)
Translates to: SDRGSPGNAMLLPSDWCTFGTFL*PQTCQS
Trigger: GGATTGGCAAGTTTGAGGCCAGAGGAAGGTGCCAAA...TGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678420.1
CDS-3UTR CCA 90 bp AGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCCAGGAACTGGTGGAGTaGAAGTGGATCCAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: RPGLPRECYVAPIRLVYIQELVE*KWIQES
Trigger: ACTTTCCTGGATCCACTTCCACTCCACCAGTTCCTG...GATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CCA 90 bp GGAACTCCTCTGTGGGTCGTGTGTGCCGTGAGACTGGACTCCCTAAAGGGCTCTAGGGCTCTCAACCCCTaGATGCAAAACTGTGATTCA +
Preference number: 4 (lower is better)
Translates to: GTPLWVVCAVRLDSLKGSRALNP*MQNCDS
Trigger: TGAATCACAGTTTTGCATCCAGGGGTTGAGAGCCCT...AGAGCCCTTTAGGGAGTCCAGTCTCACGGCACACACGACCCACAGAGGAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CCA 90 bp GACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTGTGCCTACTATGTGCTaGGCAGTGCTTAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: DTSATSCWLPWGYSILPAVPTMC*AVLKEL
Trigger: AAGCTCTTTAAGCACTGCCCAGCACATAGTAGGCAC...AGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
3UTR CAA 72 bp TTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTaGCTCCCATCAGACTGGTGTACATCAAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: FLSDRGSPGNAM*LPSDWCTSRVL
Trigger: CAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp GGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCTCATGGCCAGCGATaGTGCACTCCCCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GMLCCSHQTGVHQGCCDTSHGQR*CTPPGV
Trigger: GACCCCTGGGGGAGTGCATCATCGCTGGCCATGAGA...AGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGAAAAGAGGGCAGCTGAGTTaGCAGGACGTTCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: CCSWKKIARHQSGAYSGKRGQLS*QDVLSG
Trigger: TCCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCT...TTTCCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR TCA 90 bp TTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTTTCTCAAAGGGTCTTaGGTCTCTCCCATCAGACTG +
Preference number: 4 (lower is better)
Translates to: FLSDRGSPGNAMLLPSDWFLKGS*VSPIRL
Trigger: CAGTCTGATGGGAGAGACTCAAGACCCTTTGAGAAA...CCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp GACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCATTTCTCAAAGGGTCTTaGGTCTCTCCCATCAGACTG +
Preference number: 4 (lower is better)
Translates to: DRGSPGNAMLLPSDWCTSFLKGS*VSPIRL
Trigger: CAGTCTGATGGGAGAGACTCAAGACCCTTTGAGAAA...TGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTTTTTCAGGCCACAGTTaGCCATGGGTAACTGAAACC +
Preference number: 4 (lower is better)
Translates to: SCQTGAPQGMLCCSHQTGFSGHS*PWVTET
Trigger: GGTTTCAGTTACCCATGGTCAACTGTGGCCTGAAAA...ACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR TCA 90 bp CCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGTTGAGCTGGAAAAGATaGCCAGACTCCCACCGCCCA +
Preference number: 4 (lower is better)
Translates to: PRECYVAPIRLVYIKGVVLSWKR*PDSHRP
Trigger: TGGGCGGTGGGAGTCTGGTCATCTTTTCCAGCTCAA...CACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp CTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTTTGAGCTGGAAAAGATaGCCAGACTCCCACCGCCCA +
Preference number: 4 (lower is better)
Translates to: LPRECYVAPIRLVYIKGVLSWKR*PDSHRP
Trigger: TGGGCGGTGGGAGTCTGGTCATCTTTTCCAGCTCAA...AACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTTGATCTGCCGGGAGTaGTCCTTAACATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: TSATSCWLPWGYSILPALLICRE*SLTFTN
Trigger: GTTGGTGAATGTTAAGGAGCACTCCCGGCAGATCAA...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp GGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACTGCAGGAGAGCTTCATaGGCCTGGTGGAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GSVEYEMGGQMRLQISLDCRRAS*AWWRPV
Trigger: CACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCA...GTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCATTTCATACTCGACACTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp CGCTGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGCATCTTCGCCGCCGCTaGTGTAGCTGGAAAAAGATA +
Preference number: 4 (lower is better)
Translates to: RCCSWKKIARHQSGAYSGHLRRR*CSWKKI
Trigger: TATCTTTTTCCAGCTACAGCAGCGGCGGCGAAGATG...CCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CCA 90 bp AGACCCAACCCAGGCTTAGGTCAGCTGCTTCACTGGTACCCTACCTCTTGCCATTCATTGTTGTCAATCTaGCTCGGATCCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RPNPGLGQLLHWYPTSCHSLLSI*LGSRRS
Trigger: TGACCTGCGGGATCCGAGCCAGATTGACAACAATGA...ATGGCAAGAGGTAGGGTACCAGTGAAGCAGCTGACCTAAGCCTGGGTTGGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677540.1
CDS-3UTR CCA 90 bp AAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGAAAGGCAGAGACCCAACCTCATTGTTGTCAATCTaGCTCGGATCCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: KIARHQSGAYSGKGRDPTSLLSI*LGSRRS
Trigger: TGACCTGCGGGATCCGAGCCAGATTGACAACAATGA...GGTTGGGTCTCTGCCTTTCCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CCA 90 bp CGCTGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGTGTGAGAATCTTCTCTaGCCTGGTTGGAGATCCACC +
Preference number: 4 (lower is better)
Translates to: RCCSWKKIARHQSGAYSGCENLL*PGWRST
Trigger: GGTGGATCTCCAACCAGGCCAGAGAAGATTCTCACA...CCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677540.1
CDS-3UTR CCA 90 bp AAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTACTGTTGGCGCTGTTTaGGCACGCCTATGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLVVSQDIVCFPRGLCDPTVGAV*ARLCLL
Trigger: GAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGT...AGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTACTGCGTGTGGCAGCTaGGCTGCCGGTTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: GMLCCSHQTGVHQGCCDTTACGS*AAGSHC
Trigger: ACAGTGGGAACCGGCAGCCCAGCTGCCACACGCAGT...AGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATTGCTCCCATCAGACTaGTGTACATCAAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SDRGSPGNAMLLPSDWCTLLPSD*CTSRVL
Trigger: CAACACCCTTGATGTACACCAGTCTGATGGGAGCAA...TGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp AACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAGAGCTTCATGCGCCTaGTGGAGGCCTGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: NHGWGQLMSFGMVGVSSMRASCA*WRPVGT
Trigger: AGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCT...CATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTCTTCCAAAACACTTTaGAGGTGGCACTCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: DTSATSCWLPWGYSILPASSKTL*RWHSPN
Trigger: ATTTGGGGAGTGCCACCTCCAAAGTGTTTTGGAAGA...AGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679270.1
3UTR CAA 72 bp CAGATGGGCTCTTTACAGGATTCTGTGTCTCCCTCATaGGTCTTGAGCACTTGCTCCCTGGCTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: QMGSLQDSVSPS*VLSTCSLAVLG
Trigger: GCCAAGTACAGCCAGGGAGCAAGTGCTCAAGACCAATGAGGGAGACACAGAATCCTGTAAAGAGCCCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR TCA 90 bp TCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATTGGTGTCTCATGGCCAGCGATaGTGCACTCCCCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SHQTGVHQGCCDTSIKLVSHGQR*CTPPGV
Trigger: GACCCCTGGGGGAGTGCATCATCGCTGGCCATGAGA...CACCAATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp ACTTCCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTAAGAGGGCAGCTGAGTTaGCAGGACGTTCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: TSIKLVVSQDIVCFPRGLRGQLS*QDVLSG
Trigger: TCCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCT...TAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGCGGTTATACTTAATCTaGGTAATGGACCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: TSATSCWLPWGYSILPALRLYLI*VMDRSW
Trigger: CCATGAGCGGTCCATTACGCAGATTAAGTATAACCG...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR GCA 90 bp TTACTCTGGGAAAGGCAGAGACCCAACCCAGGCTTAGGTCAGCTGCTTCACTGGTTGATCTGCCGGGAGTaGTCCTTAACATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: LLWERQRPNPGLGQLLHWLICRE*SLTFTN
Trigger: GTTGGTGAATGTTAAGGAGCACTCCCGGCAGATCAA...CCAGTGAAGCAGCTGACCTAAGCCTGGGTTGGGTCTCTGCCTTTCCCAGAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR GCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGACCTGGCCTCAAACTTaGCAATCCTGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTTWPQT*QSWWRL
Trigger: CAACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGT...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR GCA 90 bp CCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTACCTGGCCTCAAACTTaGCAATCCTGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PQGMLCCSHQTGVHQGCCTWPQT*QSWWRL
Trigger: CAACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGT...ACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR GCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGGGCACCTTCCTCTCTTaGCATCAGGATGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTGTFLS*HQDGRQ
Trigger: TTGCCTTCCATCCTGATGGCAAGAGAGGAAGGTGCC...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR GCA 90 bp CTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGGCACCTTCCTCTCTTaGCATCAGGATGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LPRECYVAPIRLVYIKGVGTFLS*HQDGRQ
Trigger: TTGCCTTCCATCCTGATGGCAAGAGAGGAAGGTGCC...AACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR GCA 90 bp CCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGGGCACCTTCCTCTCTTaGCATCAGGATGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: PRECYVAPIRLVYIKGVVGTFLS*HQDGRQ
Trigger: TTGCCTTCCATCCTGATGGCAAGAGAGGAAGGTGCC...CACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR GCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGGTTTGGGCACGCCTATaGCTCCTCTTTTGGCACCTT +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTVWARL*LLFWHL
Trigger: AAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAAC...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR GCA 90 bp CCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGTTTGGGCACGCCTATaGCTCCTCTTTTGGCACCTT +
Preference number: 4 (lower is better)
Translates to: PQGMLCCSHQTGVHQGCCVWARL*LLFWHL
Trigger: AAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAAC...ACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GACATAGAGAATAGGGTGAGATGGGCAGGGCTCTCAACCCCTGGATGCAAAACTGTTTGGGCACGCCTATaGCTCCTCTTTTGGCACCTT +
Preference number: 4 (lower is better)
Translates to: DIENRVRWAGLSTPGCKTVWARL*LLFWHL
Trigger: AAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAAC...AGTTTTGCATCCAGGGGTTGAGAGCCCTGCCCATCTCACCCTATTCTCTATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR GCA 90 bp CCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGTTGGTCTTGAGCACTTaGTCCCTGGCTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: PRECYVAPIRLVYIKGVVLVLST*SLAVLG
Trigger: GCCAAGTACAGCCAGGGAGCAAGTGCTCAAGACCAA...CACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAAAAACTTGCTTCCTCGTaGCCATTGCTCTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: VTSNLEQSSFWEVGADAEKLASS*PLLCPL
Trigger: GAGGGGGCAGAGCAATGGGCACGAGGAAGCAAGTTT...TTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CCA 90 bp GGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGAACTGTTGGCGCTGTTTaGGCACGCCTATGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSTNVLWYGGSVEYEMGGTVGAV*ARLCLL
Trigger: GAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGT...TCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp AAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGGGAAGGGCTACTGTTaGCGCTGTTTGGGCACGCCT +
Preference number: 4 (lower is better)
Translates to: KVKPWMGSTNVLWYGGSVGKGYC*RCLGTP
Trigger: AGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCC...GACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGGGTTCCCACTGTCATTaGAGTTTGGGGAAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTGSHCH*SLGKGY
Trigger: GTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACC...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CCA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCAGAAGAAACTCTAGATaGGACCAATGGACACCAAGT +
Preference number: 4 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSRRNSR*DQWTPS
Trigger: ACTTGGTGTCCATTGGTCCCATCTAGAGTTTCTTCT...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CCA 90 bp GGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACCAAAGCATGGACAACTaGCTGAGTCGGCTGGACGGC +
Preference number: 4 (lower is better)
Translates to: GQLMSFGMVGVSSMKWEDQSMDN*LSRLDG
Trigger: GCCGTCCAGCCGACTCAGCCAGTTGTCCATGCTTTG...GTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp CAGAAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTAGAGCTTCATGCGCCTaGTGGAGGCCTGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: QKVKPWMGSTNVLWYGGSRASCA*WRPVGT
Trigger: AGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCT...ACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTAGTTTGAGACCAGCCTaGCCAACATCTCTACTAAAA +
Preference number: 4 (lower is better)
Translates to: DTSATSCWLPWGYSILPASLRPA*PTSLLK
Trigger: TTTTAGTAGAGATGTTGGCCAGGCTGGTCTCAAACT...AGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CCA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGATGAGCCACCACACCTaGCCTCAAATGCAAATTGTA +
Preference number: 4 (lower is better)
Translates to: TSATSCWLPWGYSILPALMSHHT*PQMQIV
Trigger: TACAATTTGCATTTGAGGCCAGGTGTGGTGGCTCAT...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR TCA 90 bp ATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAAGAGGGCAGCTGAGTTaGCAGGACGTTCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: MGSTNVLWYGGSVEYEMGRGQLS*QDVLSG
Trigger: TCCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCT...TCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp GGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTAGAGGGCAGCTGAGTTaGCAGGACGTTCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: GMLCCSHQTGVHQGCCDTRGQLS*QDVLSG
Trigger: TCCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCT...AGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGTCCTGGCTAACATGGTaGAACCCCATCTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTSWLTW*NPISFS
Trigger: GGAGAAAGAGATGGGGTTTCACCATGTTAGCCAGGA...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR TCA 90 bp ATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGACTCCCTCATTGGTCTTaGGCACTTGCTCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: MGSTNVLWYGGSVEYEMGLPHWS*ALAPWL
Trigger: CAGCCAGGGAGCAAGTGCTCAAGACCAATGAGGGAG...TCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp CTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCCTCCCTCATTGGTCTTaGGCACTTGCTCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LCCSHQTGVHQGCCDTSILPHWS*ALAPWL
Trigger: CAGCCAGGGAGCAAGTGCTCAAGACCAATGAGGGAG...GATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCGCCTGGCAAACATGGTaGAATCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLAWQTW*NPVSTK
Trigger: TTTAGTAGAGACAGGATTTCACCATGTTTGCCAGGC...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR GCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGTTGAGAAGGGCCAGCTaGTTTCCTGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTLRRAS*FPVSQS
Trigger: GGACTGTGAAACAGGAAAGCAGCTGGCCCTTCTCAA...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR GCA 90 bp GCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTTGATCTGCCGGGAGTaGTCCTTAACATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: APQGMLCCSHQTGVHQGCLICRE*SLTFTN
Trigger: GTTGGTGAATGTTAAGGAGCACTCCCGGCAGATCAA...ACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp AATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTACCTGGCCTCAAACTTaGCAATCCTGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: NWWFPRTLCVSPEGYVTLTWPQT*QSWWRL
Trigger: CAACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGT...AAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR GCA 90 bp AATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTGTTTGGGCACGCCTATaGCTCCTCTTTTGGCACCTT +
Preference number: 4 (lower is better)
Translates to: NWWFPRTLCVSPEGYVTLVWARL*LLFWHL
Trigger: AAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAAC...AAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATGTGTGGCAGCTGGGCTaGCGGTTCCCACTGTCATTG +
Preference number: 4 (lower is better)
Translates to: VAPIRLVYIKGVVILPSNVWQLG*RFPLSL
Trigger: CAATGACAGTGGGAACCGGCAGCCCAGCTGCCACAC...ATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp TCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATTGGTGGTGTGGCAGCTGGGCTaGCGGTTCCCACTGTCATTG +
Preference number: 4 (lower is better)
Translates to: SHQTGVHQGCCDTSIKLVVWQLG*RFPLSL
Trigger: CAATGACAGTGGGAACCGGCAGCCCAGCTGCCACAC...CACCAATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTCAGGGAATGCTATGTTaGTCCCATCAGACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: APQGMLCCSHQTGVHQGCQGMLC*SHQTGV
Trigger: TACACCAGTCTGATGGGAGCAACATAGCATTCCCTG...ACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACGGGCTCCCCAGGGAATaGTATGTTGCTCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: GQLMSFGMVGVSSMKWEDGLPRE*YVAPIR
Trigger: TCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCC...GTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAATTGGTCTTGAGCACTTaGTCCCTGGCTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: VTSNLEQSSFWEVGADAELVLST*SLAVLG
Trigger: GCCAAGTACAGCCAGGGAGCAAGTGCTCAAGACCAA...TTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp AAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCTCTGTGGGTCGTGTGTaGCGTGAGACTGGACTCCCT +
Preference number: 4 (lower is better)
Translates to: KVKPWMGSTNVLWYGGSVSVGRV*RETGLP
Trigger: AGGGAGTCCAGTCTCACGGCACACACGACCCACAGA...GACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp AATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTCTCTGGCCTCAAACTTaGCAATCCTGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: NWWFPRTLCVSPEGYVTLLWPQT*QSWWRL
Trigger: CAACCTCCACCAGGATTGGCAAGTTTGAGGCCAGAG...AAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678420.1
CDS-3UTR CCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGTCATTGTTGTCAATCTaGCTCGGATCCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTSLLSI*LGSRRS
Trigger: TGACCTGCGGGATCCGAGCCAGATTGACAACAATGA...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CCA 90 bp CCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTTCATTGTTGTCAATCTaGCTCGGATCCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PQGMLCCSHQTGVHQGCCSLLSI*LGSRRS
Trigger: TGACCTGCGGGATCCGAGCCAGATTGACAACAATGA...ACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGCTATGCCTCCTCTTTTaGCACCTTCCTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTLCLLF*HLPLLP
Trigger: TGGCAAGAGAGGAAGGTGCCAAAAGAGGAGGCATAG...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CCA 90 bp ACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGACTGTTGGCGCTGTTTaGGCACGCCTATGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TNVLWYGGSVEYEMGGQMTVGAV*ARLCLL
Trigger: GAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGT...CATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGACTGTCATTGGAGTTTaGGGAAGGGCTACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTTVIGV*GRATVG
Trigger: GCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGT...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CCA 90 bp GTTGTAGCCCAACTTCTGGACAAGCATCTAGAACTTGGAAGCTTCCTGAGGCTTGCTTTGTCACTCCTCTaGGCATCTCCTCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VVAQLLDKHLELGSFLRLALSLL*ASPLCL
Trigger: CAGGCAGAGAGGAGATGCCCAGAGGAGTGACAAAGC...AAGCCTCAGGAAGCTTCCAAGTTCTAGATGCTTGTCCAGAAGTTGGGCTACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CCA 90 bp GACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCACTTCCATCAAATTGGTaGTTTCCCAGGACATTGTGT +
Preference number: 4 (lower is better)
Translates to: DRGSPGNAMLLPSDWCTSLPSNW*FPRTLC
Trigger: ACACAATGTCCTGGGAAACCACCAATTTGATGGAAG...TGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TTTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGTCAACTAATGTCCTTTaGTATGGTGGGAGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: FLVRPGLPRECYVAPIRLSTNVL*YGGSVE
Trigger: CTCGACACTCCCACCATACCAAAGGACATTAGTTGA...CAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGGGTTAGGAACTCCTCTGTaGGTCGTGTGTGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: GRTDEATDKLRLYPQGSGLGTPL*VVCAVR
Trigger: TCTCACGGCACACACGACCCACAGAGGAGTTCCTAA...CCCACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGGGCTATGCCTCCTCTTTTaGCACCTTCCTCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GRTDEATDKLRLYPQGSGLCLLF*HLPLAS
Trigger: TGAGGCCAGAGGAAGGTGCCAAAAGAGGAGGCATAG...CCCACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678420.1
CDS-3UTR CCA 90 bp GTTGTAGCCCAACTTCTGGACAAGCATCTAGAACTTGGAAGCTTCCTGAGGCTTGGAACCTCCCCCTCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VVAQLLDKHLELGSFLRLGTSPS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGAGGGGGAGGTTCC...AAGCCTCAGGAAGCTTCCAAGTTCTAGATGCTTGTCCAGAAGTTGGGCTACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR TCA 90 bp TTCTGGCAGGAGGTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGATTCTGGCCAACATGGTaGAACCTTTCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FWQEVTSNLEQSSFWEVGFWPTW*NLSPLP
Trigger: AGGAAGAGGAGAAAGGTTTCACCATGTTGGCCAGAA...TCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGACCTCCTGCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678150.1
CDS-3UTR TCA 90 bp GGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACGCAGTGGGCAGCCACTaGAGGCTTTTAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: GSVEYEMGGQMRLQISLDAVGSH*RLLNRA
Trigger: AGCTCTGTTTAAAAGCCTTCAGTGGCTGCCCACTGC...GTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCATTTCATACTCGACACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp AATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTTGGGAGTGTCGAGTATaGAATGGGAGGACAGATGAG +
Preference number: 4 (lower is better)
Translates to: NWWFPRTLCVSPEGYVTLWECRV*NGRTDE
Trigger: CTCATCTGTCCTCCCATTTCATACTCGACACTCCCA...AAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGTCATCCTGGACCCCTTaGGCAAGACCATGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: WMGSTNVLWYGGSVEYEMSSWTP*ARPWLD
Trigger: ATCCAGCCATGGTCTTGCTCAAGGGGTCCAGGATGA...CATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR GCA 90 bp GAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGAAAGGCAGAGACCCCGGTTATACTTAATCTaGGTAATGGACCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: EKDSQAPVRCLLWERQRPRLYLI*VMDRSW
Trigger: CCATGAGCGGTCCATTACGCAGATTAAGTATAACCG...GGGTCTCTGCCTTTCCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR GCA 90 bp CCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGTTGAGAAGGGCCAGCTaGTTTCCTGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: PSNWWFPRTLCVSPEGYVLRRAS*FPVSQS
Trigger: GGACTGTGAAACAGGAAAGCAGCTGGCCCTTCTCAA...CACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGTTGATCTGCCGGGAGTaGTCCTTAACATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTLICRE*SLTFTN
Trigger: GTTGGTGAATGTTAAGGAGCACTCCCGGCAGATCAA...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR GCA 90 bp GGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACGTTTGGGCACGCCTATaGCTCCTCTTTTGGCACCTT +
Preference number: 4 (lower is better)
Translates to: GQLMSFGMVGVSSMKWEDVWARL*LLFWHL
Trigger: AAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAAC...GTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp ACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGGGGCTCCCCAGGGAATaGTATGTTGCTCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: TNVLWYGGSVEYEMGGQMGLPRE*YVAPIR
Trigger: TCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCC...CATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTGGGCTCCCCAGGGAATaGTATGTTGCTCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: EQFLGGRSRCRIPRELCFGLPRE*YVAPIR
Trigger: TCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCC...AAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAACTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp TTCTGGCAGGAGGTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGGAGGTAGGAGCAGATaGAGAATTCCAAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: FWQEVTSNLEQSSFWEVGGGRSR*RIPREL
Trigger: CAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCC...TCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGACCTCCTGCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATTGGTGGTAATGGACCGCTCATaGCCCTGCAGTAGGATCGGC +
Preference number: 4 (lower is better)
Translates to: SHQTGVHQGCCDTSIKLVVMDRS*PCSRIG
Trigger: GCCGATCCTACTGCAGGGCCATGAGCGGTCCATTAC...CACCAATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp AATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTTCATTGTTGTCAATCTaGCTCGGATCCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: NWWFPRTLCVSPEGYVTLSLLSI*LGSRRS
Trigger: TGACCTGCGGGATCCGAGCCAGATTGACAACAATGA...AAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAACTATGCCTCCTCTTTTaGCACCTTCCTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: VTSNLEQSSFWEVGADAELCLLF*HLPLLP
Trigger: TGGCAAGAGAGGAAGGTGCCAAAAGAGGAGGCATAG...TTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TTTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGCTTCCATCAAATTGGTaGTTTCCCAGGACATTGTGT +
Preference number: 4 (lower is better)
Translates to: FLVRPGLPRECYVAPIRLLPSNW*FPRTLC
Trigger: ACACAATGTCCTGGGAAACCACCAATTTGATGGAAG...CAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GACATAGAGAATAGGGTGAGATGGGCAGGGCTCTCAACCCCTGGATGCAAAACTTTGCTCCCATCAGACTaGTGTACATCAAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: DIENRVRWAGLSTPGCKTLLPSD*CTSRVL
Trigger: CAACACCCTTGATGTACACCAGTCTGATGGGAGCAA...AGTTTTGCATCCAGGGGTTGAGAGCCCTGCCCATCTCACCCTATTCTCTATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CCA 90 bp ACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGCTCCCTGGCTGTACTTaGCAAGGGCTTGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TNVLWYGGSVEYEMGGQMLPGCT*QGLELE
Trigger: TTCCAGCTCAAGCCCTTGCCAAGTACAGCCAGGGAG...CATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp AACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGGATTCCAGGAACTGGTaGAGTGGAAGTGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: NHGWGQLMSFGMVGVSSMDSRNW*SGSGSR
Trigger: CCTGGATCCACTTCCACTCCACCAGTTCCTGGAATC...CATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CCA 90 bp GGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACCTGGATTCCAGGAACTaGTGGAGTGGAAGTGGATCC +
Preference number: 4 (lower is better)
Translates to: GQLMSFGMVGVSSMKWEDLDSRN*WSGSGS
Trigger: GGATCCACTTCCACTCCACCAGTTCCTGGAATCCAG...GTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR TCA 90 bp GGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGGGTTTCTCAAAGGGTCTTaGGTCTCTCCCATCAGACTG +
Preference number: 4 (lower is better)
Translates to: GRTDEATDKLRLYPQGSGFLKGS*VSPIRL
Trigger: CAGTCTGATGGGAGAGACTCAAGACCCTTTGAGAAA...CCCACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGCAGTGGGCAGCCACTaGAGGCTTTTAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: WMGSTNVLWYGGSVEYEMAVGSH*RLLNRA
Trigger: AGCTCTGTTTAAAAGCCTTCAGTGGCTGCCCACTGC...CATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp GAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTGCAGTGGGCAGCCACTaGAGGCTTTTAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: EQFLGGRSRCRIPRELCFAVGSH*RLLNRA
Trigger: AGCTCTGTTTAAAAGCCTTCAGTGGCTGCCCACTGC...AAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAACTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp ACTTCCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGGGAGTGTCGAGTATaGAATGGGAGGACAGATGAG +
Preference number: 4 (lower is better)
Translates to: TSIKLVVSQDIVCFPRGLWECRV*NGRTDE
Trigger: CTCATCTGTCCTCCCATTTCATACTCGACACTCCCA...TAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp GAAATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCATTGAGCTGGAAAAGATaGCCAGACTCCCACCGCCCA +
Preference number: 4 (lower is better)
Translates to: EMGGQMRLQISLDFILKALSWKR*PDSHRP
Trigger: TGGGCGGTGGGAGTCTGGTCATCTTTTCCAGCTCAA...TGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp AATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGTACTTGGCAAGGGCTTaGGCTGGAAAAGATGACCAG +
Preference number: 4 (lower is better)
Translates to: NVLWYGGSVEYEMGGQMRYLARA*AGKDDQ
Trigger: CTGGTCATCTTTTCCAGCTCAAGCCCTTGCCAAGTA...CCTCATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGCGGTTATACTTAATCTaGGTAATGGACCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SSSVAHNGFELSQARWFTRLYLI*VMDRSW
Trigger: CCATGAGCGGTCCATTACGCAGATTAAGTATAACCG...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR GCA 90 bp GGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGGGTTGATCTGCCGGGAGTaGTCCTTAACATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: GRTDEATDKLRLYPQGSGLICRE*SLTFTN
Trigger: GTTGGTGAATGTTAAGGAGCACTCCCGGCAGATCAA...CCCACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp CTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCACCTGGCCTCAAACTTaGCAATCCTGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LCCSHQTGVHQGCCDTSITWPQT*QSWWRL
Trigger: CAACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGT...GATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTGGCACCTTCCTCTCTTaGCATCAGGATGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: EQFLGGRSRCRIPRELCFGTFLS*HQDGRQ
Trigger: TTGCCTTCCATCCTGATGGCAAGAGAGGAAGGTGCC...AAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAACTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR GCA 90 bp CCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGGGAGGTAGGAGCAGATaGAGAATTCCAAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: PSNWWFPRTLCVSPEGYVGGRSR*RIPREL
Trigger: CAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCC...CACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp ATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGATTGGTCTTGAGCACTTaGTCCCTGGCTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: MGSTNVLWYGGSVEYEMGLVLST*SLAVLG
Trigger: GCCAAGTACAGCCAGGGAGCAAGTGCTCAAGACCAA...TCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp CTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCGGTTCCCACTGTCATTaGAGTTTGGGGAAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: LCCSHQTGVHQGCCDTSIGSHCH*SLGKGY
Trigger: GTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACC...GATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp CAGAAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTAATGCAAAAACTAGCTaGGTGTGGTGGCGGTCGCCT +
Preference number: 4 (lower is better)
Translates to: QKVKPWMGSTNVLWYGGSNAKTS*VWWRSP
Trigger: AGGCGACCGCCACCACACCCAGCTAGTTTTTGCATT...ACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGAATGCAAAAACTAGCTaGGTGTGGTGGCGGTCGCCT +
Preference number: 4 (lower is better)
Translates to: WMGSTNVLWYGGSVEYEMNAKTS*VWWRSP
Trigger: AGGCGACCGCCACCACACCCAGCTAGTTTTTGCATT...CATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp ATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGGAGCAAGACCATGGCTaGATTCCAGGAACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: MGGQMRLQISLDFILKAVEQDHG*IPGTGG
Trigger: TCCACCAGTTCCTGGAATCCAGCCATGGTCTTGCTC...CACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR TCA 90 bp GGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACTCTCTCCCATCAGACTaGGGAATCCTCAAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: GSVEYEMGGQMRLQISLDSLPSD*GILKAK
Trigger: CTTAGCTTTGAGGATTCCTCAGTCTGATGGGAGAGA...GTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCATTTCATACTCGACACTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp ATACTTCCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTCTCTCCCATCAGACTaGGGAATCCTCAAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: ILPSNWWFPRTLCVSPEGSLPSD*GILKAK
Trigger: CTTAGCTTTGAGGATTCCTCAGTCTGATGGGAGAGA...GCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp AATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGTTTCTCAAAGGGTCTTaGGTCTCTCCCATCAGACTG +
Preference number: 4 (lower is better)
Translates to: NVLWYGGSVEYEMGGQMRFLKGS*VSPIRL
Trigger: CAGTCTGATGGGAGAGACTCAAGACCCTTTGAGAAA...CCTCATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp GCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTACATCAAGGGTGTTGTaGTACTTCCATCAAATTGGT +
Preference number: 4 (lower is better)
Translates to: APQGMLCCSHQTGVHQGCTSRVL*YFHQIG
Trigger: ACCAATTTGATGGAAGTATCACAACACCCTTGATGT...ACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp CTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCTACTTGGCAAGGGCTTaGGCTGGAAAAGATGACCAG +
Preference number: 4 (lower is better)
Translates to: LCCSHQTGVHQGCCDTSIYLARA*AGKDDQ
Trigger: CTGGTCATCTTTTCCAGCTCAAGCCCTTGCCAAGTA...GATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp AATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGTTGATCTGCCGGGAGTaGTCCTTAACATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: NVLWYGGSVEYEMGGQMRLICRE*SLTFTN
Trigger: GTTGGTGAATGTTAAGGAGCACTCCCGGCAGATCAA...CCTCATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GTTGTAGCCCAACTTCTGGACAAGCATCTAGAACTTGGAAGCTTCCTGAGGCTTTTGATCTGCCGGGAGTaGTCCTTAACATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: VVAQLLDKHLELGSFLRLLICRE*SLTFTN
Trigger: GTTGGTGAATGTTAAGGAGCACTCCCGGCAGATCAA...AAGCCTCAGGAAGCTTCCAAGTTCTAGATGCTTGTCCAGAAGTTGGGCTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR GCA 90 bp GGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACGGAGGTAGGAGCAGATaGAGAATTCCAAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: GSVEYEMGGQMRLQISLDGGRSR*RIPREL
Trigger: CAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCC...GTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCATTTCATACTCGACACTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp AACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGGGAGGTAGGAGCAGATaGAGAATTCCAAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: NHGWGQLMSFGMVGVSSMGGRSR*RIPREL
Trigger: CAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCC...CATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTCATTGTTGTCAATCTaGCTCGGATCCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: EQFLGGRSRCRIPRELCFSLLSI*LGSRRS
Trigger: TGACCTGCGGGATCCGAGCCAGATTGACAACAATGA...AAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAACTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCATTGTTGTCAATCTaGCTCGGATCCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GMLCCSHQTGVHQGCCDTSLLSI*LGSRRS
Trigger: TGACCTGCGGGATCCGAGCCAGATTGACAACAATGA...AGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp ACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGCTATGCCTCCTCTTTTaGCACCTTCCTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: TNVLWYGGSVEYEMGGQMLCLLF*HLPLLP
Trigger: TGGCAAGAGAGGAAGGTGCCAAAAGAGGAGGCATAG...CATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR CCA 90 bp ATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGACTGTCATTGGAGTTTaGGGAAGGGCTACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: MGGQMRLQISLDFILKAVTVIGV*GRATVG
Trigger: GCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGT...CACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GAAATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGGTTCCCACTGTCATTaGAGTTTGGGGAAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: EMGGQMRLQISLDFILKAGSHCH*SLGKGY
Trigger: GTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACC...TGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATGGTTCCCACTGTCATTaGAGTTTGGGGAAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: VAPIRLVYIKGVVILPSNGSHCH*SLGKGY
Trigger: GTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACC...ATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATAATGCAAAAACTAGCTaGGTGTGGTGGCGGTCGCCT +
Preference number: 4 (lower is better)
Translates to: VAPIRLVYIKGVVILPSNNAKTS*VWWRSP
Trigger: AGGCGACCGCCACCACACCCAGCTAGTTTTTGCATT...ATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTATTCTATTCCTGGCCTaGTACATGGGGCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GMLCCSHQTGVHQGCCDTILFLA*YMGLKA
Trigger: TGCCTTCAGCCCCATGTACCAGGCCAGGAATAGAAT...AGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR TCA 90 bp TGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGTCTCTCCCATCAGACTaGGGAATCCTCAAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: WMGSTNVLWYGGSVEYEMSLPSD*GILKAK
Trigger: CTTAGCTTTGAGGATTCCTCAGTCTGATGGGAGAGA...CATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp CCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGACATCAAGGGTGTTGTaGTACTTCCATCAAATTGGT +
Preference number: 4 (lower is better)
Translates to: PRECYVAPIRLVYIKGVVTSRVL*YFHQIG
Trigger: ACCAATTTGATGGAAGTATCACAACACCCTTGATGT...CACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp GAAGAAACTCTAGATGGGACCAATGGACACCAAGTCCATTTTGTGTTTTTCTGCCCGCCCAGGACCACCTaGATGGAAGAAGAAACTCTA +
Preference number: 4 (lower is better)
Translates to: EETLDGTNGHQVHFVFFCPPRTT*MEEETL
Trigger: TAGAGTTTCTTCTTCCATTCAGGTGGTCCTGGGCGG...GCAGAAAAACACAAAATGGACTTGGTGTCCATTGGTCCCATCTAGAGTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR GCA 90 bp GTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATTTGAGAAGGGCCAGCTaGTTTCCTGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: VAPIRLVYIKGVVILPSNLRRAS*FPVSQS
Trigger: GGACTGTGAAACAGGAAAGCAGCTGGCCCTTCTCAA...ATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GAAATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCATTGAGAAGGGCCAGCTaGTTTCCTGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: EMGGQMRLQISLDFILKALRRAS*FPVSQS
Trigger: GGACTGTGAAACAGGAAAGCAGCTGGCCCTTCTCAA...TGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTCAGGGAATGCTATGTTaGTCCCATCAGACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: GMLCCSHQTGVHQGCCDTQGMLC*SHQTGV
Trigger: TACACCAGTCTGATGGGAGCAACATAGCATTCCCTG...AGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp ATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGCAGGGAATGCTATGTTaGTCCCATCAGACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: MGGQMRLQISLDFILKAVQGMLC*SHQTGV
Trigger: TACACCAGTCTGATGGGAGCAACATAGCATTCCCTG...CACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp CCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATTaGTGGTTTCCCAGGACATTG +
Preference number: 4 (lower is better)
Translates to: PRECYVAPIRLVYIKGVVILPSN*WFPRTL
Trigger: CAATGTCCTGGGAAACCACCAATTTGATGGAAGTAT...CACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp ACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGTTGCTCCCATCAGACTaGTGTACATCAAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TNVLWYGGSVEYEMGGQMLLPSD*CTSRVL
Trigger: CAACACCCTTGATGTACACCAGTCTGATGGGAGCAA...CATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp ATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGATTGCTCCCATCAGACTaGTGTACATCAAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: MGSTNVLWYGGSVEYEMGLLPSD*CTSRVL
Trigger: CAACACCCTTGATGTACACCAGTCTGATGGGAGCAA...TCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACTCAACTAATGTCCTTTaGTATGGTGGGAGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: GQLMSFGMVGVSSMKWEDSTNVL*YGGSVE
Trigger: CTCGACACTCCCACCATACCAAAGGACATTAGTTGA...GTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp AACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGTCAACTAATGTCCTTTaGTATGGTGGGAGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: NHGWGQLMSFGMVGVSSMSTNVL*YGGSVE
Trigger: CTCGACACTCCCACCATACCAAAGGACATTAGTTGA...CATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGGGGTCCCTTTTATCAGATaGGCTCTTTACAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: GRTDEATDKLRLYPQGSGVPFIR*ALYRIL
Trigger: CAGAATCCTGTAAAGAGCCCATCTGATAAAAGGGAC...CCCACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp TCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATTGGTGTCTCTCCCATCAGACTaGGGAATCCTCAAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: SHQTGVHQGCCDTSIKLVSLPSD*GILKAK
Trigger: CTTAGCTTTGAGGATTCCTCAGTCTGATGGGAGAGA...CACCAATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR TCA 90 bp GTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATTTTTCAGGCCACAGTTaGCCATGGGTAACTGAAACC +
Preference number: 4 (lower is better)
Translates to: VAPIRLVYIKGVVILPSNFSGHS*PWVTET
Trigger: GGTTTCAGTTACCCATGGTCAACTGTGGCCTGAAAA...ATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR GCA 90 bp CTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCCGGTTATACTTAATCTaGGTAATGGACCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: LCCSHQTGVHQGCCDTSIRLYLI*VMDRSW
Trigger: CCATGAGCGGTCCATTACGCAGATTAAGTATAACCG...GATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GAAGAAACTCTAGATGGGACCAATGGACACCAAGTCCATTTTGTGTTTTTCTGCTTGAGAAGGGCCAGCTaGTTTCCTGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: EETLDGTNGHQVHFVFFCLRRAS*FPVSQS
Trigger: GGACTGTGAAACAGGAAAGCAGCTGGCCCTTCTCAA...GCAGAAAAACACAAAATGGACTTGGTGTCCATTGGTCCCATCTAGAGTTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR GCA 90 bp TCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATTGGTGCAGGGAATGCTATGTTaGTCCCATCAGACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: SHQTGVHQGCCDTSIKLVQGMLC*SHQTGV
Trigger: TACACCAGTCTGATGGGAGCAACATAGCATTCCCTG...CACCAATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTCTTGTACTGTCATTGGAGTTTaGGGAAGGGCTACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: FLGGRSRCRIPRELCFSCTVIGV*GRATVG
Trigger: GCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGT...ACAAGAAAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp AACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGCTTCCATCAAATTGGTaGTTTCCCAGGACATTGTGT +
Preference number: 4 (lower is better)
Translates to: NHGWGQLMSFGMVGVSSMLPSNW*FPRTLC
Trigger: ACACAATGTCCTGGGAAACCACCAATTTGATGGAAG...CATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp AAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCTCAACTAATGTCCTTTaGTATGGTGGGAGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: KVKPWMGSTNVLWYGGSVSTNVL*YGGSVE
Trigger: CTCGACACTCCCACCATACCAAAGGACATTAGTTGA...GACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACGTCCCTTTTATCAGATaGGCTCTTTACAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: GQLMSFGMVGVSSMKWEDVPFIR*ALYRIL
Trigger: CAGAATCCTGTAAAGAGCCCATCTGATAAAAGGGAC...GTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATCGGTTATACTTAATCTaGGTAATGGACCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: VAPIRLVYIKGVVILPSNRLYLI*VMDRSW
Trigger: CCATGAGCGGTCCATTACGCAGATTAAGTATAACCG...ATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp CTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCCTTCCATCAAATTGGTaGTTTCCCAGGACATTGTGT +
Preference number: 4 (lower is better)
Translates to: LCCSHQTGVHQGCCDTSILPSNW*FPRTLC
Trigger: ACACAATGTCCTGGGAAACCACCAATTTGATGGAAG...GATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp ACTTCCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTAATACTTCCATCAAATTaGTGGTTTCCCAGGACATTG +
Preference number: 4 (lower is better)
Translates to: TSIKLVVSQDIVCFPRGLILPSN*WFPRTL
Trigger: CAATGTCCTGGGAAACCACCAATTTGATGGAAGTAT...TAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp GAAGAAACTCTAGATGGGACCAATGGACACCAAGTCCATTTTGTGTTTTTCTGCCTCTTCTTCTTTACCTaGCCTCAAACTTGCCAATCC +
Preference number: 4 (lower is better)
Translates to: EETLDGTNGHQVHFVFFCLFFFT*PQTCQS
Trigger: GGATTGGCAAGTTTGAGGCCAGGTAAAGAAGAAGAG...GCAGAAAAACACAAAATGGACTTGGTGTCCATTGGTCCCATCTAGAGTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CCA 90 bp TCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATTGGTGATACTTCCATCAAATTaGTGGTTTCCCAGGACATTG +
Preference number: 4 (lower is better)
Translates to: SHQTGVHQGCCDTSIKLVILPSN*WFPRTL
Trigger: CAATGTCCTGGGAAACCACCAATTTGATGGAAGTAT...CACCAATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CCA 90 bp TTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTCTTGTGTCCCTTTTATCAGATaGGCTCTTTACAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: FLGGRSRCRIPRELCFSCVPFIR*ALYRIL
Trigger: CAGAATCCTGTAAAGAGCCCATCTGATAAAAGGGAC...ACAAGAAAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR GCA 90 bp GAAGAAACTCTAGATGGGACCAATGGACACCAAGTCCATTTTGTGTTTTTCTGCGGTTGGGATTACAGATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: EETLDGTNGHQVHFVFFCGWDYR*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATCTGTAATCCCAACC...GCAGAAAAACACAAAATGGACTTGGTGTCCATTGGTCCCATCTAGAGTTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CCA 90 bp ATGCAAAACTGTGATTCAGTAAGCAAATATAGCCTAGAACTGGGTCCATTCTATATACTTCCATCAAATTaGTGGTTTCCCAGGACATTG +
Preference number: 4 (lower is better)
Translates to: MQNCDSVSKYSLELGPFYILPSN*WFPRTL
Trigger: CAATGTCCTGGGAAACCACCAATTTGATGGAAGTAT...ATAGAATGGACCCAGTTCTAGGCTATATTTGCTTACTGAATCACAGTTTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS TCA 90 bp CTCTGGTGCTGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCTaGAGCGGGCCTCCGCCGGCCTGCAGCGGGTTCATGAGCCGACCT +
Preference number: 5 (lower is better)
Translates to: LWCWWPLCGVARSRC*SGPPPACSGFMSRP
Trigger: AGGTCGGCTCATGAACCCGCTGCAGGCCGGCGGAGGCCCGCTTCAGCAGCGGCTGCGTGCCACCCCACAGAGCGGCCACCAGCACCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676801.1
ENST00000677202.1
ENST00000677701.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS GCA 90 bp AAGTCGGGCAGGGTGAGCTGTGCAGCCGGAGGGAGGGAGCAGCCCTaGCAGACCGCTGCCCAGGCTCACCTTGGCTGTGTTGTCCTTGGA +
Preference number: 5 (lower is better)
Translates to: KSGRVSCAAGGREQP*QTAAQAHLGCVVLG
Trigger: TCCAAGGACAACACAGCCAAGGTGAGCCTGGGCAGCGGTCTGGCAGGGCTGCTCCCTCCCTCCGGCTGCACAGCTCACCCTGCCCGACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678106.1
CDS CCA 90 bp TCCGGATTATGGGTCTCCGCCCTCGTCTGCATTCAGGGCAGGTGTTaGCTCTGGTGCTGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SGLWVSALVCIQGRC*LWCWWPLCGVARSR
Trigger: GCGGCTGCGTGCCACCCCACAGAGCGGCCACCAGCACCAGAGCCAACACCTGCCCTGAATGCAGACGAGGGCGGAGACCCATAATCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677202.1
ENST00000677701.1
ENST00000677760.1
CDS CCA 90 bp GGCCCTGCAGTAGGATCGGCTTTCGTCTGCATTCAGGGCAGGTGTTaGCTCTGGTGCTGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: GPAVGSAFVCIQGRC*LWCWWPLCGVARSR
Trigger: GCGGCTGCGTGCCACCCCACAGAGCGGCCACCAGCACCAGAGCCAACACCTGCCCTGAATGCAGACGAAAGCCGATCCTACTGCAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677772.1
ENST00000677844.1
CDS-3UTR CAA 90 bp GGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTGGTGGAGGCCTGTGGGGACTCGGTCCGGACAGCCGAATaGGTCTTGAGAAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GRPLQESFMRLVEACGDSVRTAE*VLRRAS
Trigger: GCTGGCCCTTCTCAAGACCAATTCGGCTGTCCGGAC...CGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CAA 90 bp CGCCCAGAGGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTGGTGGAGGCCTGTGCACTGTCATTGGAGTTaGGGGAAGGGCTACTGTTGG +
Preference number: 5 (lower is better)
Translates to: RPEGVPCRRASCAWWRPVHCHWS*GKGYCW
Trigger: CCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTG...CACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS TCA 90 bp TGGTGGAGGCCTGTGGGGACTCGGAGCAAAGCATGGACAACTGGCTaGGTCGGCTGGACGGCTGCCGCTGACTTTCTCCTCTTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: WWRPVGTRSKAWTTG*VGWTAAADFLLFLD
Trigger: GTCCAGGAAGAGGAGAAAGTCAGCGGCAGCCGTCCAGCCGACTCAGCCAGTTGTCCATGCTTTGCTCCGAGTCCCCACAGGCCTCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678063.1
ENST00000678420.1
CDS CCA 90 bp CTGCGTGTGGCAGCTGGGCTGCCGGTTCCCACTGTCATTGGAGTTTaGGGAAGGGCTACTGTTGGCGCTGTTTGGGCACGCCTATGCCTC +
Preference number: 5 (lower is better)
Translates to: LRVAAGLPVPTVIGV*GRATVGAVWARLCL
Trigger: GAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCGGCAGCCCAGCTGCCACACGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS CCA 90 bp TCCTGGACTGCGTGTGGCAGCTGGGCTGCCGGTTCCCACTGTCATTaGAGTTTGGGGAAGGGCTACTGTTGGCGCTGTTTGGGCACGCCT +
Preference number: 5 (lower is better)
Translates to: SWTACGSWAAGSHCH*SLGKGYCWRCLGTP
Trigger: AGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCGGCAGCCCAGCTGCCACACGCAGTCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp CGCCCAGAGGGCGTCCCCTGCAGGAGAGCTTCATGCGCCTGGTGGAGGCCTGTGACAGAGTACCATACATaGACGATAGGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: RPEGVPCRRASCAWWRPVTEYHT*TIGSLA
Trigger: GGCCAAGGACCCTATCGTCAATGTATGGTACTCTGT...CACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGACGCCCTCTGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CAA 90 bp GACCCCTTGAGCAAGACCATGGCTGGATTCCAGGAACTGGTGGAGTGGAAGTGGGGGGAAGGGCTACTGTaGGCGCTGTTTGGGCACGCC +
Preference number: 5 (lower is better)
Translates to: DPLSKTMAGFQELVEWKWGEGLL*ALFGHA
Trigger: GGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCC...CCACTTCCACTCCACCAGTTCCTGGAATCCAGCCATGGTCTTGCTCAAGGGGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CAA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCGTCCGGACAGCCGAATaGGTCTTGAGAAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSVRTAE*VLRRAS
Trigger: GCTGGCCCTTCTCAAGACCAATTCGGCTGTCCGGAC...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CAA 90 bp GACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTGAGAGGGCAGCTGAGTaGACAGGACGTTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: DTSATSCWLPWGYSILPAERAAE*TGRSVR
Trigger: CCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCTC...AGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS CCA 90 bp GCTGCCGGTTCCCACTGTCATTGGAGTTTGGGGAAGGGCTACTGTTaGCGCTGTTTGGGCACGCCTATGCCTCCTCTTTTGGCACCTTCC +
Preference number: 5 (lower is better)
Translates to: AAGSHCHWSLGKGYC*RCLGTPMPPLLAPS
Trigger: GGAAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp TCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACAGTCCGGACAGCCGAATaGGTCTTGAGAAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SDRGSPGNAMLLPSDWCTVRTAE*VLRRAS
Trigger: GCTGGCCCTTCTCAAGACCAATTCGGCTGTCCGGAC...TGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCCAGCCTCCTGAGTGGTaGGGATTACAGATGCCTGGC +
Preference number: 5 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSQPPEW*GLQMPG
Trigger: GCCAGGCATCTGTAATCCCAACCACTCAGGAGGCTG...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS CCA 90 bp CCCACTGTCATTGGAGTTTGGGGAAGGGCTACTGTTGGCGCTGTTTaGGCACGCCTATGCCTCCTCTTTTGGCACCTTCCTCTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: PTVIGVWGRATVGAV*ARLCLLFWHLPLAS
Trigger: TGAGGCCAGAGGAAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678420.1
CDS-3UTR CAA 90 bp AAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGAAAGGCAGAGACCCAACCGTCCGGACAGCCGAATaGGTCTTGAGAAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: KIARHQSGAYSGKGRDPTVRTAE*VLRRAS
Trigger: GCTGGCCCTTCTCAAGACCAATTCGGCTGTCCGGAC...GGTTGGGTCTCTGCCTTTCCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CAA 90 bp TTACTCTGGGAAAGGCAGAGACCCAACCCAGGCTTAGGTCAGCTGCTTCACTGGGTCCGGACAGCCGAATaGGTCTTGAGAAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LLWERQRPNPGLGQLLHWVRTAE*VLRRAS
Trigger: GCTGGCCCTTCTCAAGACCAATTCGGCTGTCCGGAC...CCAGTGAAGCAGCTGACCTAAGCCTGGGTTGGGTCTCTGCCTTTCCCAGAGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CAA 90 bp CGCTGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGGAGAGGGCAGCTGAGTaGACAGGACGTTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: RCCSWKKIARHQSGAYSGERAAE*TGRSVR
Trigger: CCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCTC...CCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CAA 90 bp TTACTCTGGGAAAGGCAGAGACCCAACCCAGGCTTAGGTCAGCTGCTTCACTGGGAGAGGGCAGCTGAGTaGACAGGACGTTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: LLWERQRPNPGLGQLLHWERAAE*TGRSVR
Trigger: CCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCTC...CCAGTGAAGCAGCTGACCTAAGCCTGGGTTGGGTCTCTGCCTTTCCCAGAGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CAA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCGAGAGGGCAGCTGAGTaGACAGGACGTTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLERAAE*TGRSVR
Trigger: CCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCTC...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CAA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGGGGGAAGGGCTACTGTaGGCGCTGTTTGGGCACGCC +
Preference number: 5 (lower is better)
Translates to: SSSVAHNGFELSQARWFTGEGLL*ALFGHA
Trigger: GGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCC...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS GCA 90 bp GGAGTTTGGGGAAGGGCTACTGTTGGCGCTGTTTGGGCACGCCTATaGCTCCTCTTTTGGCACCTTCCTCTGGCCTCAAACTTGCCAATC +
Preference number: 5 (lower is better)
Translates to: GVWGRATVGAVWARL*LLFWHLPLASNLPI
Trigger: GATTGGCAAGTTTGAGGCCAGAGGAAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678420.1
CDS CCA 90 bp CCCACTGTCATTGGAGTTTGGGGAAGGGCTACTGTTGGCGCTGTTTaGGCACGCCTATGCCTCCTCTTTTGGCACCTTCCTCTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: PTVIGVWGRATVGAV*ARLCLLFWHLPLLP
Trigger: TGGCAAGAGAGGAAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR CAA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTGACGATAGGGTCCTaGGCCACAGTAAAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSLTIGS*ATVKRR
Trigger: CCTCCTCTTTACTGTGGCCAAGGACCCTATCGTCAA...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CAA 90 bp GACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTAACCTGGCCTCAAACTaGCCAATCCTGGTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: DTSATSCWLPWGYSILPANLASN*PILVEV
Trigger: AACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGTT...AGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676998.1
CDS-3UTR CAA 90 bp TTTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGTACTGTTGGCGCTGTTaGGGCACGCCTATGCCTCCT +
Preference number: 5 (lower is better)
Translates to: FLVRPGLPRECYVAPIRLYCWRC*GTPMPP
Trigger: AGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTA...CAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp TCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACACGGTTCCCACTGTCATaGGAGTTTGGGGAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: SDRGSPGNAMLLPSDWCTRFPLS*EFGEGL
Trigger: TAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCG...TGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp AGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCTGGTTTCCCAGGACATaGTGTGTTTCCCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: RPGLPRECYVAPIRLVYIWFPRT*CVSPEG
Trigger: GCCCTCTGGGGAAACACACAATGTCCTGGGAAACCA...GATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS GCA 90 bp CTGGCTAACATGGTGAAACCCCATCTCTTTCTCCTCTTCCTGGACTaGGTGTGGCAGCTGGGCTGCCGGTTCCCACTGTCATTGGAGTTT +
Preference number: 5 (lower is better)
Translates to: LANMVKPHLFLLFLD*VWQLGCRFPLSLEF
Trigger: AAACTCCAATGACAGTGGGAACCGGCAGCCCAGCTGCCACACGCAGTCCAGGAAGAGGAGAAAGAGATGGGGTTTCACCATGTTAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CAA 90 bp GACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTACAGAGTACCATACATaGACGATAGGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: DTSATSCWLPWGYSILPATEYHT*TIGSLA
Trigger: GGCCAAGGACCCTATCGTCAATGTATGGTACTCTGT...AGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CAA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGGTCCGGACAGCCGAATaGGTCTTGAGAAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SSSVAHNGFELSQARWFTVRTAE*VLRRAS
Trigger: GCTGGCCCTTCTCAAGACCAATTCGGCTGTCCGGAC...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CAA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGGAGAGGGCAGCTGAGTaGACAGGACGTTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: SSSVAHNGFELSQARWFTERAAE*TGRSVR
Trigger: CCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCTC...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CAA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTACCTGGCCTCAAACTaGCCAATCCTGGTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: TSATSCWLPWGYSILPALYLASN*PILVEV
Trigger: AACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGTA...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CAA 90 bp TTTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGTGGCACCTTCCTCTCTaGCCATCAGGATGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: FLVRPGLPRECYVAPIRLWHLPL*PSGWKA
Trigger: TGCCTTCCATCCTGATGGCAAGAGAGGAAGGTGCCA...CAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGAGGGGAAGGGCTACTGTaGGCGCTGTTTGGGCACGCC +
Preference number: 5 (lower is better)
Translates to: GSTNVLWYGGSVEYEMGGGEGLL*ALFGHA
Trigger: GGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCC...TCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTCGGTTCCCACTGTCATaGGAGTTTGGGGAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: GLPRECYVAPIRLVYIKGRFPLS*EFGEGL
Trigger: TAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCG...ACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp AGACACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTCAATCCTTCCAGCTTaGTCACTCCTCTGGGCATCT +
Preference number: 5 (lower is better)
Translates to: RHFCHLLLAALGLFNPSSSILPA*SLLWAS
Trigger: AGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGA...GCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CAA 90 bp TCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTCCAGGGAATGCTATGTaGCTCCCATCAGACTGGTGT +
Preference number: 5 (lower is better)
Translates to: SCQTGAPQGMLCCSHQTGPGNAM*LPSDWC
Trigger: ACACCAGTCTGATGGGAGCAACATAGCATTCCCTGG...ACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GACCCCTTGAGCAAGACCATGGCTGGATTCCAGGAACTGGTGGAGTGGAAGTGGCCAGGGAATGCTATGTaGCTCCCATCAGACTGGTGT +
Preference number: 5 (lower is better)
Translates to: DPLSKTMAGFQELVEWKWPGNAM*LPSDWC
Trigger: ACACCAGTCTGATGGGAGCAACATAGCATTCCCTGG...CCACTTCCACTCCACCAGTTCCTGGAATCCAGCCATGGTCTTGCTCAAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CAA 90 bp TTCTTGTCAGACCGGGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTCTGTGTCTCCCTCATaGGTCTTGAGCACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: FLSDRGSPGNAMLLPSDWSVSPS*VLSTCS
Trigger: GGAGCAAGTGCTCAAGACCAATGAGGGAGACACAGA...CCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCCCGGTCTGACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GGGCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTCCTCTGGCCTCAAACTaGCCAATCCTGGTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: GLPRECYVAPIRLVYIKGPLASN*PILVEV
Trigger: AACCTCCACCAGGATTGGCAAGTTTGAGGCCAGAGG...ACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678420.1
CDS-3UTR CAA 90 bp TGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGGGCATCTCCTCTGGGGTTTCACCATGTaGGCCAGGCTGGTTACGAAC +
Preference number: 5 (lower is better)
Translates to: CPGAIQSFQLCHSSGHLLWGFTM*ARLVTN
Trigger: GTTCGTAACCAGCCTGGCCAACATGGTGAAACCCCA...GAGGAGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS CCA 90 bp GAAAGGCCCCTCTCTCGGTGGAGTTGCCGCCAAGAATTTGGTCTTTaGAGTCAAACAGGTCTGGGTCAGCCCCACCACTTACTCACTAGA +
Preference number: 5 (lower is better)
Translates to: ERPLSRWSCRQEFGL*SQTGLGQPHHLLTR
Trigger: TCTAGTGAGTAAGTGGTGGGGCTGACCCAGACCTGTTTGACTCCAAAGACCAAATTCTTGGCGGCAACTCCACCGAGAGAGGGGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CCA 90 bp AACGTGAGTAAGACCGGAAAAGGTTTCGAGGTCACTTCCGGATTATaGGTCTCCGCCCCTTCGTTCCCGGAAGTAGAAGACAGCGGCGTT +
Preference number: 5 (lower is better)
Translates to: NVSKTGKGFEVTSGL*VSAPSFPEVEDSGV
Trigger: AACGCCGCTGTCTTCTACTTCCGGGAACGAAGGGGCGGAGACCCATAATCCGGAAGTGACCTCGAAACCTTTTCCGGTCTTACTCACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677711.1
CDS-3UTR CAA 90 bp AAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGAAAGGCAGAGACCCAACCTTGACGATAGGGTCCTaGGCCACAGTAAAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: KIARHQSGAYSGKGRDPTLTIGS*ATVKRR
Trigger: CCTCCTCTTTACTGTGGCCAAGGACCCTATCGTCAA...GGTTGGGTCTCTGCCTTTCCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CAA 90 bp CTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCACTCCTCTGACAGAGTACCATACATaGACGATAGGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LLLAALGLFNPSSFVTPLTEYHT*TIGSLA
Trigger: GGCCAAGGACCCTATCGTCAATGTATGGTACTCTGT...CAGAGGAGTGACAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CAA 90 bp AATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTGTCCGGACAGCCGAATaGGTCTTGAGAAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: NWWFPRTLCVSPEGYVTLVRTAE*VLRRAS
Trigger: GCTGGCCCTTCTCAAGACCAATTCGGCTGTCCGGAC...AAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp TTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTCCCCTATGCCTCCTCTTTaGGCACCTTCCTCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: LVVSQDIVCFPRGLCDPSPMPPL*APSSLA
Trigger: GGCAAGAGAGGAAGGTGCCAAAAGAGGAGGCATAGG...GGAAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR CAA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGTACTGTTGGCGCTGTTaGGGCACGCCTATGCCTCCT +
Preference number: 5 (lower is better)
Translates to: SSSVAHNGFELSQARWFTYCWRC*GTPMPP
Trigger: AGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTA...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CAA 90 bp GAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTGGGGAAGGGCTACTGTaGGCGCTGTTTGGGCACGCC +
Preference number: 5 (lower is better)
Translates to: EQFLGGRSRCRIPRELCFGEGLL*ALFGHA
Trigger: GGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCC...AAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp ACTTCTGCCACCTCCTGCTGGCTGCCCTGGGGCTATTCAATCCTTCCAGCTTTGTCAATCCTTCCAGCTTaGTCACTCCTCTGGGCATCT +
Preference number: 5 (lower is better)
Translates to: TSATSCWLPWGYSILPALSILPA*SLLWAS
Trigger: AGATGCCCAGAGGAGTGACAAAGCTGGAAGGATTGA...CAAAGCTGGAAGGATTGAATAGCCCCAGGGCAGCCAGCAGGAGGTGGCAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676998.1
ENST00000679270.1
CDS-3UTR CAA 90 bp TTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTCCTGGTTTCCCAGGACATaGTGTGTTTCCCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: LVVSQDIVCFPRGLCDPSWFPRT*CVSPEG
Trigger: GCCCTCTGGGGAAACACACAATGTCCTGGGAAACCA...GGAAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS TCA 90 bp CTGTCTCTCCCTCAGACTGTGCTTCTCCACAGCAAAGACCTGATCTaGTTTCCCTCCATGTCCCCAGTACCCAGCATAGACCTGGCACTA +
Preference number: 5 (lower is better)
Translates to: LSLPQTVLLHSKDLI*FPSMSPVPSIDLAL
Trigger: TAGTGCCAGGTCTATGCTGGGTACTGGGGACATGGAGGGAAATCAGATCAGGTCTTTGCTGTGGAGAAGCACAGTCTGAGGGAGAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS TCA 90 bp AACAGCACCCCCAACTCCCAACTCCCAACTCAGCCTCTCCATCGCTaGCAGACCCTAGCAACACGGACTCAGACCCAAAATAAGGATACA +
Preference number: 5 (lower is better)
Translates to: NSTPNSQLPTQPLHR*QTLATRTQTQNKDT
Trigger: TGTATCCTTATTTTGGGTCTGAGTCCGTGTTGCTAGGGTCTGTCAGCGATGGAGAGGCTGAGTTGGGAGTTGGGAGTTGGGGGTGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677183.1
CDS GCA 90 bp AATACTGAGGTGCGTCTCTGTGAAAGGCCCCTCTCTCGGTGGAGTTaGCGCCAAGAATTTGGTCTTTGGAGTCAAACAGGTCTGGGTCAG +
Preference number: 5 (lower is better)
Translates to: NTEVRLCERPLSRWS*RQEFGLWSQTGLGQ
Trigger: CTGACCCAGACCTGTTTGACTCCAAAGACCAAATTCTTGGCGGCAACTCCACCGAGAGAGGGGCCTTTCACAGAGACGCACCTCAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CCA 90 bp TGTAGGGCTCATTGTTGTCTGTGTGGGGCAGTAGATGTTAGGCCCTaGGCTCTAGAACTGTACCCTTTACCTCAACCCCAGCCCTATTCC +
Preference number: 5 (lower is better)
Translates to: CRAHCCLCGAVDVRP*ALELYPLPQPQPYS
Trigger: GGAATAGGGCTGGGGTTGAGGTAAAGGGTACAGTTCTAGAGCCCAGGGCCTAACATCTACTGCCCCACACAGACAACAATGAGCCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489353.6
ENST00000677676.1
CDS-3UTR CAA 90 bp CGCTGCTGTAGCTGGAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGACAGAGTACCATACATaGACGATAGGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: RCCSWKKIARHQSGAYSGTEYHT*TIGSLA
Trigger: GGCCAAGGACCCTATCGTCAATGTATGGTACTCTGT...CCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTTTTTCCAGCTACAGCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CAA 90 bp ATACTTCCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCGAGAGGGCAGCTGAGTaGACAGGACGTTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: ILPSNWWFPRTLCVSPEGERAAE*TGRSVR
Trigger: CCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCTC...GCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGAGAGAGGGCAGCTGAGTaGACAGGACGTTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: GSTNVLWYGGSVEYEMGGERAAE*TGRSVR
Trigger: CCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCTC...TCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGAAAGGCAGAGACCCAACCTGGCCTCAAACTaGCCAATCCTGGTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: EKDSQAPVRCLLWERQRPNLASN*PILVEV
Trigger: AACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGTT...GGGTCTCTGCCTTTCCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678883.1
CDS-3UTR CAA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGTGGCACCTTCCTCTCTaGCCATCAGGATGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: SSSVAHNGFELSQARWFTWHLPL*PSGWKA
Trigger: TGCCTTCCATCCTGATGGCAAGAGAGGAAGGTGCCA...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CAA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGCCTATGCCTCCTCTTTaGGCACCTTCCTCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: SSSVAHNGFELSQARWFTPMPPL*APSSLA
Trigger: GGCAAGAGAGGAAGGTGCCAAAAGAGGAGGCATAGG...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CAA 90 bp TTCTGGCAGGAGGTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGACCTATGCCTCCTCTTTaGGCACCTTCCTCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: FWQEVTSNLEQSSFWEVGPMPPL*APSSLA
Trigger: GGCAAGAGAGGAAGGTGCCAAAAGAGGAGGCATAGG...TCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGACCTCCTGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR CAA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGCGGTTCCCACTGTCATaGGAGTTTGGGGAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: SSSVAHNGFELSQARWFTRFPLS*EFGEGL
Trigger: TAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCG...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CAA 90 bp GCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTATTGGTCTTGAGCACTaGCTCCCTGGCTGTACTTGG +
Preference number: 5 (lower is better)
Translates to: APQGMLCCSHQTGVHQGCIGLEH*LPGCTW
Trigger: CCAAGTACAGCCAGGGAGCAAGTGCTCAAGACCAAT...ACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GACATAGAGAATAGGGTGAGATGGGCAGGGCTCTCAACCCCTGGATGCAAAACTTCTCCCTCATTGGTCTaGAGCACTTGCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: DIENRVRWAGLSTPGCKTSPSLV*STCSLA
Trigger: AGCCAGGGAGCAAGTGCTCAAGACCAATGAGGGAGA...AGTTTTGCATCCAGGGGTTGAGAGCCCTGCCCATCTCACCCTATTCTCTATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS-3UTR CAA 90 bp AATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTCCTATGCCTCCTCTTTaGGCACCTTCCTCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: NWWFPRTLCVSPEGYVTLPMPPL*APSSGL
Trigger: GAGGCCAGAGGAAGGTGCCAAAAGAGGAGGCATAGG...AAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678420.1
CDS TCA 90 bp CTGGGCCCAGCAGTTGTAGAAATTCTCGGAAAAGTCAGTTGTCCTTaGGCCTCAGTTTCATCATCTTGGCATCGACAGGTGGGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: LGPAVVEILGKVSCP*ASVSSSWHRQVGPG
Trigger: GCCAGGACCCACCTGTCGATGCCAAGATGATGAAACTGAGGCTCAAGGACAACTGACTTTTCCGAGAATTTCTACAACTGCTGGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677701.1
CDS-3UTR CAA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGTTGACGATAGGGTCCTaGGCCACAGTAAAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SSSVAHNGFELSQARWFTLTIGS*ATVKRR
Trigger: CCTCCTCTTTACTGTGGCCAAGGACCCTATCGTCAA...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CAA 90 bp GAAAAAGATAGCCAGGCACCAGTCAGGTGCTTACTCTGGGAAAGGCAGAGACCCACAGAGTACCATACATaGACGATAGGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: EKDSQAPVRCLLWERQRPTEYHT*TIGSLA
Trigger: GGCCAAGGACCCTATCGTCAATGTATGGTACTCTGT...GGGTCTCTGCCTTTCCCAGAGTAAGCACCTGACTGGTGCCTGGCTATCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677540.1
ENST00000678883.1
CDS-3UTR CAA 90 bp GCTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTACAGAGTACCATACATaGACGATAGGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: APQGMLCCSHQTGVHQGCTEYHT*TIGSLA
Trigger: GGCCAAGGACCCTATCGTCAATGTATGGTACTCTGT...ACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp CAGAAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCCGGACAGCCGAATaGGTCTTGAGAAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: QKVKPWMGSTNVLWYGGSVRTAE*VLRRAS
Trigger: GCTGGCCCTTCTCAAGACCAATTCGGCTGTCCGGAC...ACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp TGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGAGAGGGCAGCTGAGTaGACAGGACGTTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: WMGSTNVLWYGGSVEYEMERAAE*TGRSVR
Trigger: CCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCTC...CATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp CTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCGAGAGGGCAGCTGAGTaGACAGGACGTTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: LCCSHQTGVHQGCCDTSIERAAE*TGRSVR
Trigger: CCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCTC...GATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGAACCTGGCCTCAAACTaGCCAATCCTGGTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: SSSVAHNGFELSQARWFTNLASN*PILVEV
Trigger: AACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGTT...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CAA 90 bp CCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTAACCTGGCCTCAAACTaGCCAATCCTGGTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: PQGMLCCSHQTGVHQGCCNLASN*PILVEV
Trigger: AACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGTT...ACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR CAA 90 bp AAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTGGCACCTTCCTCTCTaGCCATCAGGATGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: KLVVSQDIVCFPRGLCDPWHLPL*PSGWKA
Trigger: TGCCTTCCATCCTGATGGCAAGAGAGGAAGGTGCCA...AGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR CAA 90 bp AAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTCCTATGCCTCCTCTTTaGGCACCTTCCTCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: KLVVSQDIVCFPRGLCDPPMPPL*APSSLA
Trigger: GGCAAGAGAGGAAGGTGCCAAAAGAGGAGGCATAGG...AGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR CAA 90 bp ACTTCCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATACTGTTGGCGCTGTTaGGGCACGCCTATGCCTCCT +
Preference number: 5 (lower is better)
Translates to: TSIKLVVSQDIVCFPRGLYCWRC*GTPMPP
Trigger: AGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTA...TAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACTACTGTTGGCGCTGTTaGGGCACGCCTATGCCTCCT +
Preference number: 5 (lower is better)
Translates to: GQLMSFGMVGVSSMKWEDYCWRC*GTPMPP
Trigger: AGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTA...GTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp TTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTCTTGTGGGGAAGGGCTACTGTaGGCGCTGTTTGGGCACGCC +
Preference number: 5 (lower is better)
Translates to: FLGGRSRCRIPRELCFSCGEGLL*ALFGHA
Trigger: GGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCC...ACAAGAAAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGCACTGTCATTGGAGTTaGGGGAAGGGCTACTGTTGG +
Preference number: 5 (lower is better)
Translates to: SSSVAHNGFELSQARWFTHCHWS*GKGYCW
Trigger: CCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTG...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CAA 90 bp CCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGCCAGGGAATGCTATGTaGCTCCCATCAGACTGGTGT +
Preference number: 5 (lower is better)
Translates to: PRECYVAPIRLVYIKGVVPGNAM*LPSDWC
Trigger: ACACCAGTCTGATGGGAGCAACATAGCATTCCCTGG...CACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp CTCCCCAGGGAATGCTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTCCAGGGAATGCTATGTaGCTCCCATCAGACTGGTGT +
Preference number: 5 (lower is better)
Translates to: LPRECYVAPIRLVYIKGVPGNAM*LPSDWC
Trigger: ACACCAGTCTGATGGGAGCAACATAGCATTCCCTGG...AACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAGCATTCCCTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp AATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTTCTCCCTCATTGGTCTaGAGCACTTGCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: NWWFPRTLCVSPEGYVTLSPSLV*STCSLA
Trigger: AGCCAGGGAGCAAGTGCTCAAGACCAATGAGGGAGA...AAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GGGAGGACAGATGAGGCTACAGATAAGCTTAGACTTTATCCTCAAGGCAGTGGGTCTCCCTCATTGGTCTaGAGCACTTGCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: GRTDEATDKLRLYPQGSGSPSLV*STCSLA
Trigger: AGCCAGGGAGCAAGTGCTCAAGACCAATGAGGGAGA...CCCACTGCCTTGAGGATAAAGTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp AAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTCCTCCATCCAGAAACTaGCTTCCTCGTGCCCATTGC +
Preference number: 5 (lower is better)
Translates to: KLVVSQDIVCFPRGLCDPPPSRN*LPRAHC
Trigger: GCAATGGGCACGAGGAAGCAAGTTTCTGGATGGAGG...AGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678711.1
CDS CCA 90 bp TTCTTGAATACTGAGGTGCGTCTCTGTGAAAGGCCCCTCTCTCGGTaGAGTTGCCGCCAAGAATTTGGTCTTTGGAGTCAAACAGGTCTG +
Preference number: 5 (lower is better)
Translates to: FLNTEVRLCERPLSR*SCRQEFGLWSQTGL
Trigger: CAGACCTGTTTGACTCCAAAGACCAAATTCTTGGCGGCAACTCCACCGAGAGAGGGGCCTTTCACAGAGACGCACCTCAGTATTCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CCA 90 bp TTTAATGTACACGCCACCTCCCTGGGAGAGTGCACCTTCCACACTTaGCTGAGACCTCTATGGTGGCACAATTCACAATCTGACTCAGGT +
Preference number: 5 (lower is better)
Translates to: FNVHATSLGECTFHT*LRPLWWHNSQSDSG
Trigger: ACCTGAGTCAGATTGTGAATTGTGCCACCATAGAGGTCTCAGCCAAGTGTGGAAGGTGCACTCTCCCAGGGAGGTGGCGTGTACATTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678106.1
ENST00000678306.1
ENST00000679044.1
CDS-3UTR CAA 90 bp TCTTCCTCTGTTGCTCATAATGGTTTTGAACTCAGCCAGGCGCGGTGGTTCACGACAGAGTACCATACATaGACGATAGGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SSSVAHNGFELSQARWFTTEYHT*TIGSLA
Trigger: GGCCAAGGACCCTATCGTCAATGTATGGTACTCTGT...CGTGAACCACCGCGCCTGGCTGAGTTCAAAACCATTATGAGCAACAGAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677198.1
CDS-3UTR CAA 90 bp GTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAAAACCTGGCCTCAAACTaGCCAATCCTGGTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: VTSNLEQSSFWEVGADAENLASN*PILVEV
Trigger: AACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGTT...TTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR CAA 90 bp AATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGTGGCACCTTCCTCTCTaGCCATCAGGATGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: NVLWYGGSVEYEMGGQMRWHLPL*PSGWKA
Trigger: TGCCTTCCATCCTGATGGCAAGAGAGGAAGGTGCCA...CCTCATCTGTCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTACTGTTGGCGCTGTTaGGGCACGCCTATGCCTCCT +
Preference number: 5 (lower is better)
Translates to: EQFLGGRSRCRIPRELCFYCWRC*GTPMPP
Trigger: AGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTA...AAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAACTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp AATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGACCCTTCACTGTCATTGGAGTTaGGGGAAGGGCTACTGTTGG +
Preference number: 5 (lower is better)
Translates to: NWWFPRTLCVSPEGYVTLHCHWS*GKGYCW
Trigger: CCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTG...AAGGGTCACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp CCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTATGTGCACTGTCATTGGAGTTaGGGGAAGGGCTACTGTTGG +
Preference number: 5 (lower is better)
Translates to: PSNWWFPRTLCVSPEGYVHCHWS*GKGYCW
Trigger: CCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTG...CACATAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGAAATGGGAGGATGGTTTCCCAGGACATaGTGTGTTTCCCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: GSTNVLWYGGSVEYEMGGWFPRT*CVSPEG
Trigger: GCCCTCTGGGGAAACACACAATGTCCTGGGAAACCA...TCCTCCCATTTCATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GGGAGTGTCGAGTATGAAATGGGAGGACAGATGAGGCTACAGATAAGCTTAGACTGGTTTCCCAGGACATaGTGTGTTTCCCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: GSVEYEMGGQMRLQISLDWFPRT*CVSPEG
Trigger: GCCCTCTGGGGAAACACACAATGTCCTGGGAAACCA...GTCTAAGCTTATCTGTAGCCTCATCTGTCCTCCCATTTCATACTCGACACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS TCA 90 bp CCCACCACTTACTCACTAGAAATTCTCGGAAAAGTCAGTTGTCCTTaGGCCTCAGTTTCATCATCTTGGCATCGACAGGTGGGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: PTTYSLEILGKVSCP*ASVSSSWHRQVGPG
Trigger: GCCAGGACCCACCTGTCGATGCCAAGATGATGAAACTGAGGCTCAAGGACAACTGACTTTTCCGAGAATTTCTAGTGAGTAAGTGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677760.1
CDS GCA 90 bp AGCTGCTTTCCTGGAGTCAGGCAAAGTCTGGGCTACACCATCCATTaGAATTGCAGGGAGGACATTCTAGAGAATGCTGTTTCACAGTCC +
Preference number: 5 (lower is better)
Translates to: SCFPGVRQSLGYTIH*NCREDILENAVSQS
Trigger: GGACTGTGAAACAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACTCCAGGAAAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676837.1
CDS-3UTR CAA 90 bp AACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGAGTATGTTGACGATAGGGTCCTaGGCCACAGTAAAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: NHGWGQLMSFGMVGVSSMLTIGS*ATVKRR
Trigger: CCTCCTCTTTACTGTGGCCAAGGACCCTATCGTCAA...CATACTCGACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GAAGAAACTCTAGATGGGACCAATGGACACCAAGTCCATTTTGTGTTTTTCTGCGTCCGGACAGCCGAATaGGTCTTGAGAAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: EETLDGTNGHQVHFVFFCVRTAE*VLRRAS
Trigger: GCTGGCCCTTCTCAAGACCAATTCGGCTGTCCGGAC...GCAGAAAAACACAAAATGGACTTGGTGTCCATTGGTCCCATCTAGAGTTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS-3UTR CAA 90 bp CAGAAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTCGGTTCCCACTGTCATaGGAGTTTGGGGAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: QKVKPWMGSTNVLWYGGSRFPLS*EFGEGL
Trigger: TAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCG...ACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp ACTTCCATCAAATTGGTGGTTTCCCAGGACATTGTGTGTTTCCCCAGAGGGCTAATTGGTCTTGAGCACTaGCTCCCTGGCTGTACTTGG +
Preference number: 5 (lower is better)
Translates to: TSIKLVVSQDIVCFPRGLIGLEH*LPGCTW
Trigger: CCAAGTACAGCCAGGGAGCAAGTGCTCAAGACCAAT...TAGCCCTCTGGGGAAACACACAATGTCCTGGGAAACCACCAATTTGATGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS GCA 90 bp AGCTGCTTTCCTGGAGTCAGGCAAAGTCTGGGCTACACCATCCATTaGAATTGCAGGGAGGACATTCTAGAGAATGCTACCATCACATCT +
Preference number: 5 (lower is better)
Translates to: SCFPGVRQSLGYTIH*NCREDILENATITS
Trigger: AGATGTGATGGTAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACTCCAGGAAAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS GCA 90 bp TTTCCTGGAGTCAGGCAAAGTCTGGGCTACACCATCCATTGCAATTaGAGGGAGGACATTCTAGAGAATGCTGTTTCACAGTCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: FPGVRQSLGYTIHCN*REDILENAVSQSQR
Trigger: TCTCTGGGACTGTGAAACAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACTCCAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676837.1
CDS-3UTR CAA 90 bp GAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTTGACGATAGGGTCCTaGGCCACAGTAAAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: EQFLGGRSRCRIPRELCFLTIGS*ATVKRR
Trigger: CCTCCTCTTTACTGTGGCCAAGGACCCTATCGTCAA...AAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAACTGCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp CTATGTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCTCTGTGTCTCCCTCATaGGTCTTGAGCACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: LCCSHQTGVHQGCCDTSISVSPS*VLSTCS
Trigger: GGAGCAAGTGCTCAAGACCAATGAGGGAGACACAGA...GATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS GCA 90 bp TTTCCTGGAGTCAGGCAAAGTCTGGGCTACACCATCCATTGCAATTaGAGGGAGGACATTCTAGAGAATGCTACCATCACATCTCACTGT +
Preference number: 5 (lower is better)
Translates to: FPGVRQSLGYTIHCN*REDILENATITSHC
Trigger: ACAGTGAGATGTGATGGTAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACTCCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS GCA 90 bp TTAAGAAATATGACGAAGTTCACCCGAGCCCTTGTCCTCTTGGGATaGCAAGTGAATCATCTCCCTGTTCAGCCCCAAAGAGCCTTTCTA +
Preference number: 5 (lower is better)
Translates to: LRNMTKFTRALVLLG*QVNHLPVQPQRAFL
Trigger: TAGAAAGGCTCTTTGGGGCTGAACAGGGAGATGATTCACTTGGCATCCCAAGAGGACAAGGGCTCGGGTGAACTTCGTCATATTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677183.1
CDS-3UTR CAA 90 bp AAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCACAGAGTACCATACATaGACGATAGGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: KVKPWMGSTNVLWYGGSVTEYHT*TIGSLA
Trigger: GGCCAAGGACCCTATCGTCAATGTATGGTACTCTGT...GACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp TTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTCTTGTCGGTTCCCACTGTCATaGGAGTTTGGGGAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: FLGGRSRCRIPRELCFSCRFPLS*EFGEGL
Trigger: TAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCG...ACAAGAAAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATATTGGTCTTGAGCACTaGCTCCCTGGCTGTACTTGG +
Preference number: 5 (lower is better)
Translates to: VAPIRLVYIKGVVILPSNIGLEH*LPGCTW
Trigger: CCAAGTACAGCCAGGGAGCAAGTGCTCAAGACCAAT...ATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GTCACCAGTAACCTTGAACAGAGCAGTTTCTGGGAGGTAGGAGCAGATGCAGAAGATACTTCCATCAAATaGGTGGTTTCCCAGGACATT +
Preference number: 5 (lower is better)
Translates to: VTSNLEQSSFWEVGADAEDTSIK*VVSQDI
Trigger: AATGTCCTGGGAAACCACCAATTTGATGGAAGTATC...TTCTGCATCTGCTCCTACCTCCCAGAAACTGCTCTGTTCAAGGTTACTGGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp TTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTCTTGTTCTGTGTCTCCCTCATaGGTCTTGAGCACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: FLGGRSRCRIPRELCFSCSVSPS*VLSTCS
Trigger: GGAGCAAGTGCTCAAGACCAATGAGGGAGACACAGA...ACAAGAAAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678063.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp TTTCTGGGAGGTAGGAGCAGATGCAGAATTCCAAGAGAACTGTGTTTTTCTTGTACAGAGTACCATACATaGACGATAGGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: FLGGRSRCRIPRELCFSCTEYHT*TIGSLA
Trigger: GGCCAAGGACCCTATCGTCAATGTATGGTACTCTGT...ACAAGAAAAACACAGTTCTCTTGGAATTCTGCATCTGCTCCTACCTCCCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS TCA 90 bp TACTCAAACAGGTACACTGTAGGTCCTCAATATTTGCTAAAAAGGTaGATGAACCCAGCTTACCTGTTTCACAGTCCCAGAGACGACAGC +
Preference number: 5 (lower is better)
Translates to: YSNRYTVGPQYLLKR*MNPAYLFHSPRDDS
Trigger: GCTGTCGTCTCTGGGACTGTGAAACAGGTAAGCTGGGTTCATTCACCTTTTTAGCAAATATTGAGGACCTACAGTGTACCTGTTTGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS-3UTR CAA 90 bp AAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGTCGATACTTCCATCAAATaGGTGGTTTCCCAGGACATT +
Preference number: 5 (lower is better)
Translates to: KVKPWMGSTNVLWYGGSVDTSIK*VVSQDI
Trigger: AATGTCCTGGGAAACCACCAATTTGATGGAAGTATC...GACACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp CAGAAAGTGAAACCATGGATGGGGTCAACTAATGTCCTTTGGTATGGTGGGAGTGATACTTCCATCAAATaGGTGGTTTCCCAGGACATT +
Preference number: 5 (lower is better)
Translates to: QKVKPWMGSTNVLWYGGSDTSIK*VVSQDI
Trigger: AATGTCCTGGGAAACCACCAATTTGATGGAAGTATC...ACTCCCACCATACCAAAGGACATTAGTTGACCCCATCCATGGTTTCACTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS GCA 90 bp TGGAAGGAAAATCTGGCCATTGATAACCCTTTAAAGATTCCCTACTaGCTGGAGGAAAGTCAAAACTCTTTACCTCCTCACACTGAAGGA +
Preference number: 5 (lower is better)
Translates to: WKENLAIDNPLKIPY*LEESQNSLPPHTEG
Trigger: TCCTTCAGTGTGAGGAGGTAAAGAGTTTTGACTTTCCTCCAGGCAGTAGGGAATCTTTAAAGGGTTATCAATGGCCAGATTTTCCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678106.1
ENST00000678306.1
ENST00000679044.1
CDS-3UTR CAA 90 bp GTTGCTCCCATCAGACTGGTGTACATCAAGGGTGTTGTGATACTTCCATCAAATGATACTTCCATCAAATaGGTGGTTTCCCAGGACATT +
Preference number: 5 (lower is better)
Translates to: VAPIRLVYIKGVVILPSNDTSIK*VVSQDI
Trigger: AATGTCCTGGGAAACCACCAATTTGATGGAAGTATC...ATTTGATGGAAGTATCACAACACCCTTGATGTACACCAGTCTGATGGGAGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS-3UTR CAA 90 bp GAAGAAACTCTAGATGGGACCAATGGACACCAAGTCCATTTTGTGTTTTTCTGCGACACCAAGTCCATTTaGTGTTTTTCTGCTGCCATA +
Preference number: 5 (lower is better)
Translates to: EETLDGTNGHQVHFVFFCDTKSI*CFSAAI
Trigger: TATGGCAGCAGAAAAACACAAAATGGACTTGGTGTC...GCAGAAAAACACAAAATGGACTTGGTGTCCATTGGTCCCATCTAGAGTTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679270.1
CDS TCA 72 bp TGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCTaGAGCGGGCCTCCGCCGGCCTGCAGCGGGTTCATG +
Preference number: 6 (lower is better)
Translates to: WWPLCGVARSRC*SGPPPACSGFM
Trigger: CATGAACCCGCTGCAGGCCGGCGGAGGCCCGCTTCAGCAGCGGCTGCGTGCCACCCCACAGAGCGGCCACCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676801.1
ENST00000677202.1
ENST00000677701.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CCA 72 bp GGTGTTGGCTCTGGTGCTGGTGGCCGCTCTGTGGGGTaGCACGCAGCCGCTGCTGAAGCGGGCCTCCGCCGG +
Preference number: 6 (lower is better)
Translates to: GVGSGAGGRSVG*HAAAAEAGLRR
Trigger: CCGGCGGAGGCCCGCTTCAGCAGCGGCTGCGTGCCACCCCACAGAGCGGCCACCAGCACCAGAGCCAACACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676801.1
ENST00000677202.1
ENST00000677701.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS GCA 72 bp GCCCTCGTCTGCATTCAGGGCAGGTGTTGGCTCTGGTaGTGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: ALVCIQGRCWLW*WWPLCGVARSR
Trigger: GCGGCTGCGTGCCACCCCACAGAGCGGCCACCAGCACCAGAGCCAACACCTGCCCTGAATGCAGACGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677202.1
ENST00000677701.1
ENST00000677760.1
CDS GCA 72 bp TGCAGCCGGAGGGAGGGAGCAGCCCTGCCAGACCGCTaGCCAGGCTCACCTTGGCTGTGTTGTCCTTGGACG +
Preference number: 6 (lower is better)
Translates to: CSRREGAALPDR*PGSPWLCCPWT
Trigger: CGTCCAAGGACAACACAGCCAAGGTGAGCCTGGGCAGCGGTCTGGCAGGGCTGCTCCCTCCCTCCGGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678106.1
CDS CCA 72 bp CTCGTCTGCATTCAGGGCAGGTGTTGGCTCTGGTGCTaGTGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: LVCIQGRCWLWC*WPLCGVARSRC
Trigger: GCAGCGGCTGCGTGCCACCCCACAGAGCGGCCACCAGCACCAGAGCCAACACCTGCCCTGAATGCAGACGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677202.1
ENST00000677701.1
ENST00000677760.1
CDS GCA 72 bp GCTTTCGTCTGCATTCAGGGCAGGTGTTGGCTCTGGTaGTGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: AFVCIQGRCWLW*WWPLCGVARSR
Trigger: GCGGCTGCGTGCCACCCCACAGAGCGGCCACCAGCACCAGAGCCAACACCTGCCCTGAATGCAGACGAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677772.1
ENST00000677844.1
CDS CCA 72 bp TTCGTCTGCATTCAGGGCAGGTGTTGGCTCTGGTGCTaGTGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: FVCIQGRCWLWC*WPLCGVARSRC
Trigger: GCAGCGGCTGCGTGCCACCCCACAGAGCGGCCACCAGCACCAGAGCCAACACCTGCCCTGAATGCAGACGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677772.1
ENST00000677844.1
CDS CAA 90 bp TTCCTGGACTGCGTGTGGCAGCTGGGCTGCCGGTTCCCACTGTCATaGGAGTTTGGGGAAGGGCTACTGTTGGCGCTGTTTGGGCACGCC +
Preference number: 6 (lower is better)
Translates to: FLDCVWQLGCRFPLS*EFGEGLLLALFGHA
Trigger: GGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCGGCAGCCCAGCTGCCACACGCAGTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS CCA 72 bp GCAGCTGGGCTGCCGGTTCCCACTGTCATTGGAGTTTaGGGAAGGGCTACTGTTGGCGCTGTTTGGGCACGC +
Preference number: 6 (lower is better)
Translates to: AAGLPVPTVIGV*GRATVGAVWAR
Trigger: GCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCGGCAGCCCAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS CAA 72 bp GGCAGCTGGGCTGCCGGTTCCCACTGTCATTGGAGTTaGGGGAAGGGCTACTGTTGGCGCTGTTTGGGCACG +
Preference number: 6 (lower is better)
Translates to: GSWAAGSHCHWS*GKGYCWRCLGT
Trigger: CGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCGGCAGCCCAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS CAA 90 bp ACTGCGTGTGGCAGCTGGGCTGCCGGTTCCCACTGTCATTGGAGTTaGGGGAAGGGCTACTGTTGGCGCTGTTTGGGCACGCCTATGCCT +
Preference number: 6 (lower is better)
Translates to: TACGSWAAGSHCHWS*GKGYCWRCLGTPMP
Trigger: AGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCGGCAGCCCAGCTGCCACACGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS CCA 72 bp GCGTGTGGCAGCTGGGCTGCCGGTTCCCACTGTCATTaGAGTTTGGGGAAGGGCTACTGTTGGCGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: ACGSWAAGSHCH*SLGKGYCWRCL
Trigger: CAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCGGCAGCCCAGCTGCCACACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS CAA 90 bp TCCGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGCCCAGCAGTaGCTACAGGAGATGAAGACCCTCTTCTTGAATACTGAGGTGCGT +
Preference number: 6 (lower is better)
Translates to: SAGLQRVHEPTWAQQ*LQEMKTLFLNTEVR
Trigger: ACGCACCTCAGTATTCAAGAAGAGGGTCTTCATCTCCTGTAGCAACTGCTGGGCCCAGGTCGGCTCATGAACCCGCTGCAGGCCGGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CAA 72 bp TGCGTGTGGCAGCTGGGCTGCCGGTTCCCACTGTCATaGGAGTTTGGGGAAGGGCTACTGTTGGCGCTGTTT +
Preference number: 6 (lower is better)
Translates to: CVWQLGCRFPLS*EFGEGLLLALF
Trigger: AAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCGGCAGCCCAGCTGCCACACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS CAA 90 bp GGCTGCCGGTTCCCACTGTCATTGGAGTTTGGGGAAGGGCTACTGTaGGCGCTGTTTGGGCACGCCTATGCCTCCTCTTTTGGCACCTTC +
Preference number: 6 (lower is better)
Translates to: GCRFPLSLEFGEGLL*ALFGHAYASSFGTF
Trigger: GAAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGAACCGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS CAA 90 bp CCGACCTGGGCCCAGCAGTTGCTACAGGAGATGAAGACCCTCTTCTaGAATACTGAGGTGCGTCTCTGTGAAAGGCCCCTCTCTCGGTGG +
Preference number: 6 (lower is better)
Translates to: PTWAQQLLQEMKTLF*NTEVRLCERPLSRW
Trigger: CCACCGAGAGAGGGGCCTTTCACAGAGACGCACCTCAGTATTCAAGAAGAGGGTCTTCATCTCCTGTAGCAACTGCTGGGCCCAGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CAA 90 bp TCCCACTGTCATTGGAGTTTGGGGAAGGGCTACTGTTGGCGCTGTTaGGGCACGCCTATGCCTCCTCTTTTGGCACCTTCCTCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: SHCHWSLGKGYCWRC*GTPMPPLLAPSSGL
Trigger: GAGGCCAGAGGAAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678420.1
CDS TCA 72 bp CTTCATCCCGGCTGTGACGCGAGGAAGGCCGCAACGTaGGTAAGACCGGAAAAGGTTTCGAGGTCACTTCCG +
Preference number: 6 (lower is better)
Translates to: LHPGCDARKAAT*VRPEKVSRSLP
Trigger: CGGAAGTGACCTCGAAACCTTTTCCGGTCTTACTCACGTTGCGGCCTTCCTCGCGTCACAGCCGGGATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676801.1
ENST00000677202.1
ENST00000677701.1
ENST00000677711.1
ENST00000677760.1
CDS GCA 72 bp GGAAGGGCTACTGTTGGCGCTGTTTGGGCACGCCTATaGCTCCTCTTTTGGCACCTTCCTCTGGCCTCAAAC +
Preference number: 6 (lower is better)
Translates to: GRATVGAVWARL*LLFWHLPLASN
Trigger: GTTTGAGGCCAGAGGAAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678420.1
CDS CCA 72 bp CACGCCACCTCCCTGGGAGAGTGCACCTTCCACACTTaGCTGAGACCTCTTGGCACTATACTGGTTGAGCTC +
Preference number: 6 (lower is better)
Translates to: HATSLGECTFHT*LRPLGTILVEL
Trigger: GAGCTCAACCAGTATAGTGCCAAGAGGTCTCAGCCAAGTGTGGAAGGTGCACTCTCCCAGGGAGGTGGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678534.1
CDS CAA 90 bp TCCCACTGTCATTGGAGTTTGGGGAAGGGCTACTGTTGGCGCTGTTaGGGCACGCCTATGCCTCCTCTTTTGGCACCTTCCTCTCTTGCC +
Preference number: 6 (lower is better)
Translates to: SHCHWSLGKGYCWRC*GTPMPPLLAPSSLA
Trigger: GGCAAGAGAGGAAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS GCA 72 bp CCAGGGTTTAATGTACACGCCACCTCCCTGGGAGAGTaGACCTTCCACACTTGGCTGAGACCTCTTGGCACT +
Preference number: 6 (lower is better)
Translates to: PGFNVHATSLGE*TFHTWLRPLGT
Trigger: AGTGCCAAGAGGTCTCAGCCAAGTGTGGAAGGTGCACTCTCCCAGGGAGGTGGCGTGTACATTAAACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678534.1
CDS GCA 72 bp CCAGGGTTTAATGTACACGCCACCTCCCTGGGAGAGTaGACCTTCCACACTTGGCTGAGACCTCTATGGTGG +
Preference number: 6 (lower is better)
Translates to: PGFNVHATSLGE*TFHTWLRPLWW
Trigger: CCACCATAGAGGTCTCAGCCAAGTGTGGAAGGTGCACTCTCCCAGGGAGGTGGCGTGTACATTAAACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678106.1
ENST00000678306.1
ENST00000679044.1
CDS CCA 72 bp AAGGCCCCTCTCTCGGTGGAGTTGCCGCCAAGAATTTaGTCTTTGGAGTCAAACAGGTCTGGGTCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: KAPLSVELPPRI*SLESNRSGSAP
Trigger: TGGGGCTGACCCAGACCTGTTTGACTCCAAAGACCAAATTCTTGGCGGCAACTCCACCGAGAGAGGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CCA 72 bp TCGCGGTTATACTTAATCTGCGTAATGGACCGCTCATaGCCCTGCAGTAGGATCGGCATCCCGGCTGTGACG +
Preference number: 6 (lower is better)
Translates to: SRLYLICVMDRS*PCSRIGIPAVT
Trigger: CGTCACAGCCGGGATGCCGATCCTACTGCAGGGCCATGAGCGGTCCATTACGCAGATTAAGTATAACCGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677378.1
CDS CAA 72 bp TGTTGGCGCTGTTTGGGCACGCCTATGCCTCCTCTTTaGGCACCTTCCTCTCTTGCCATCAGGATGGAAGGC +
Preference number: 6 (lower is better)
Translates to: CWRCLGTPMPPL*APSSLAIRMEG
Trigger: GCCTTCCATCCTGATGGCAAGAGAGGAAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678711.1
CDS CAA 72 bp CATTGGAGTTTGGGGAAGGGCTACTGTTGGCGCTGTTaGGGCACGCCTATGCCTCCTCTTTTGGCACCTTCC +
Preference number: 6 (lower is better)
Translates to: HWSLGKGYCWRC*GTPMPPLLAPS
Trigger: GGAAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS CAA 72 bp AAAGGCCCCTCTCTCGGTGGAGTTGCCGCCAAGAATTaGGTCTTTGGAGTCAAACAGGTCTGGGTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: KGPSLGGVAAKN*VFGVKQVWVSP
Trigger: GGGGCTGACCCAGACCTGTTTGACTCCAAAGACCAAATTCTTGGCGGCAACTCCACCGAGAGAGGGGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CAA 90 bp GTCTCTGTGAAAGGCCCCTCTCTCGGTGGAGTTGCCGCCAAGAATTaGGTCTTTGGAGTCAAACAGGTCTGGGTCAGCCCCACCACTTAC +
Preference number: 6 (lower is better)
Translates to: VSVKGPSLGGVAAKN*VFGVKQVWVSPTTY
Trigger: GTAAGTGGTGGGGCTGACCCAGACCTGTTTGACTCCAAAGACCAAATTCTTGGCGGCAACTCCACCGAGAGAGGGGCCTTTCACAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS TCA 72 bp CCCAACTCCCAACTCCCAACTCAGCCTCTCCATCGCTaGCAGACCCTAGCAACACGGACTCAGACCCAAAAT +
Preference number: 6 (lower is better)
Translates to: PNSQLPTQPLHR*QTLATRTQTQN
Trigger: ATTTTGGGTCTGAGTCCGTGTTGCTAGGGTCTGTCAGCGATGGAGAGGCTGAGTTGGGAGTTGGGAGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677183.1
CDS CCA 72 bp TCGCGGTTATACTTAATCTGCGTAATGGACCGCTCATaGCCCTGCAGTAGGATCGGCTTCATCCCGGCTGTG +
Preference number: 6 (lower is better)
Translates to: SRLYLICVMDRS*PCSRIGFIPAV
Trigger: CACAGCCGGGATGAAGCCGATCCTACTGCAGGGCCATGAGCGGTCCATTACGCAGATTAAGTATAACCGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 29 transcripts:
ENST00000373586.2
ENST00000474371.2
ENST00000676554.1
ENST00000676679.1
ENST00000676801.1
ENST00000676837.1
ENST00000676998.1
ENST00000677183.1
ENST00000677198.1
ENST00000677202.1
ENST00000677353.1
ENST00000677540.1
ENST00000677640.1
ENST00000677676.1
ENST00000677701.1
ENST00000677711.1
ENST00000677760.1
ENST00000677767.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678534.1
ENST00000678689.1
ENST00000678711.1
ENST00000678842.1
ENST00000678883.1
ENST00000678889.1
ENST00000678968.1
ENST00000679290.1
CDS CCA 72 bp TGGAGTTTCGCTCTTGTCCTGCAGGCTGCTGTGCGATaGTGTGATCTCGGCTCACTGCAACCTTTCAAGCGA +
Preference number: 6 (lower is better)
Translates to: WSFALVLQAAVR*CDLGSLQPFKR
Trigger: TCGCTTGAAAGGTTGCAGTGAGCCGAGATCACACCATCGCACAGCAGCCTGCAGGACAAGAGCGAAACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS CCA 72 bp GAAGGGCCAGCTGCTTTCCTGGAGTCAGGCAAAGTCTaGGCTACACCATCCATTGCAATTGCAGGGAGGACA +
Preference number: 6 (lower is better)
Translates to: EGPAAFLESGKV*ATPSIAIAGRT
Trigger: TGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACTCCAGGAAAGCAGCTGGCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489353.6
ENST00000676837.1
CDS CCA 72 bp ATTGGAGTTTGGGGAAGGGCTACTGTTGGCGCTGTTTaGGCACGCCTATGCCTCCTCTTTTGGCACCTTCCT +
Preference number: 6 (lower is better)
Translates to: IGVWGRATVGAV*ARLCLLFWHLP
Trigger: AGGAAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS CCA 72 bp TCCCACTGTCATTGGAGTTTGGGGAAGGGCTACTGTTaGCGCTGTTTGGGCACGCCTATGCCTCCTCTTTTG +
Preference number: 6 (lower is better)
Translates to: SHCHWSLGKGYC*RCLGTPMPPLL
Trigger: CAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS CCA 72 bp AAGACCGGAAAAGGTTTCGAGGTCACTTCCGGATTATaGGTCTCCGCCCTCGTCTGCATTCAGGGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: KTGKGFEVTSGL*VSALVCIQGRC
Trigger: ACACCTGCCCTGAATGCAGACGAGGGCGGAGACCCATAATCCGGAAGTGACCTCGAAACCTTTTCCGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677202.1
ENST00000677701.1
ENST00000677760.1
CDS CAA 72 bp CCTCTCTCGGTGGAGTTGCCGCCAAGAATTTGGTCTTaGGAGTCAAACAGGTCTGGGTCAGCCCCACCACTT +
Preference number: 6 (lower is better)
Translates to: PLSVELPPRIWS*ESNRSGSAPPL
Trigger: AAGTGGTGGGGCTGACCCAGACCTGTTTGACTCCAAAGACCAAATTCTTGGCGGCAACTCCACCGAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CAA 72 bp CTGCAGCGGGTTCATGAGCCGACCTGGGCCCAGCAGTaGCTACAGGAGATGAAGACCCTCTTCTTGAATACT +
Preference number: 6 (lower is better)
Translates to: LQRVHEPTWAQQ*LQEMKTLFLNT
Trigger: AGTATTCAAGAAGAGGGTCTTCATCTCCTGTAGCAACTGCTGGGCCCAGGTCGGCTCATGAACCCGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CAA 72 bp ACACGCCACCTCCCTGGGAGAGTGCACCTTCCACACTaGGCTGAGACCTCTATGGTGGCACAATTCACAATC +
Preference number: 6 (lower is better)
Translates to: TRHLPGRVHLPH*AETSMVAQFTI
Trigger: GATTGTGAATTGTGCCACCATAGAGGTCTCAGCCAAGTGTGGAAGGTGCACTCTCCCAGGGAGGTGGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678106.1
ENST00000678306.1
ENST00000679044.1
CDS CAA 72 bp TGTTGGCGCTGTTTGGGCACGCCTATGCCTCCTCTTTaGGCACCTTCCTCTGGCCTCAAACTTGCCAATCCT +
Preference number: 6 (lower is better)
Translates to: CWRCLGTPMPPL*APSSGLKLANP
Trigger: AGGATTGGCAAGTTTGAGGCCAGAGGAAGGTGCCAAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678420.1
CDS TCA 72 bp AGTTCACCCGAGCCCTTGTCCTCTTGGGATGCCAAGTaGATCATCTCCCTGTTCAGCCCCAAAGAGCCTTTC +
Preference number: 6 (lower is better)
Translates to: SSPEPLSSWDAK*IISLFSPKEPF
Trigger: GAAAGGCTCTTTGGGGCTGAACAGGGAGATGATTCACTTGGCATCCCAAGAGGACAAGGGCTCGGGTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677183.1
CDS GCA 72 bp GATCTCGGCTCACTGCAACCTTTCAAGCGATTCTTCTaGCTCAGCCTCCTGAGTCGATGGGATTACAGGTGC +
Preference number: 6 (lower is better)
Translates to: DLGSLQPFKRFF*LSLLSRWDYRC
Trigger: GCACCTGTAATCCCATCGACTCAGGAGGCTGAGGCAGAAGAATCGCTTGAAAGGTTGCAGTGAGCCGAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS GCA 72 bp GTGCGTCTCTGTGAAAGGCCCCTCTCTCGGTGGAGTTaGCGCCAAGAATTTGGTCTTTGGAGTCAAACAGGT +
Preference number: 6 (lower is better)
Translates to: VRLCERPLSRWS*RQEFGLWSQTG
Trigger: ACCTGTTTGACTCCAAAGACCAAATTCTTGGCGGCAACTCCACCGAGAGAGGGGCCTTTCACAGAGACGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CCA 72 bp TCGCGGTTATACTTAATCTGCGTAATGGACCGCTCATaGCCCTGCAGTAGGATCGGCTTCTGTGGGGACAAG +
Preference number: 6 (lower is better)
Translates to: SRLYLICVMDRS*PCSRIGFCGDK
Trigger: CTTGTCCCCACAGAAGCCGATCCTACTGCAGGGCCATGAGCGGTCCATTACGCAGATTAAGTATAACCGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471486.6
ENST00000483517.5
ENST00000676957.1
CDS CCA 72 bp CTCTCTCGGTGGAGTTGCCGCCAAGAATTTGGTCTTTaGAGTCAAACAGGTCTGGGTCAGCCCCACCACTTA +
Preference number: 6 (lower is better)
Translates to: LSRWSCRQEFGL*SQTGLGQPHHL
Trigger: TAAGTGGTGGGGCTGACCCAGACCTGTTTGACTCCAAAGACCAAATTCTTGGCGGCAACTCCACCGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CCA 72 bp ACTGAGGTGCGTCTCTGTGAAAGGCCCCTCTCTCGGTaGAGTTGCCGCCAAGAATTTGGTCTTTGGAGTCAA +
Preference number: 6 (lower is better)
Translates to: TEVRLCERPLSR*SCRQEFGLWSQ
Trigger: TTGACTCCAAAGACCAAATTCTTGGCGGCAACTCCACCGAGAGAGGGGCCTTTCACAGAGACGCACCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676801.1
ENST00000677760.1
ENST00000677772.1
ENST00000677844.1
CDS CCA 72 bp AAGACCGGAAAAGGTTTCGAGGTCACTTCCGGATTATaGGTCTCCGCCCCTTCGTTCCCGGAAGTAGAAGAC +
Preference number: 6 (lower is better)
Translates to: KTGKGFEVTSGL*VSAPSFPEVED
Trigger: GTCTTCTACTTCCGGGAACGAAGGGGCGGAGACCCATAATCCGGAAGTGACCTCGAAACCTTTTCCGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677711.1
CDS CAA 72 bp TTCCCACTGTCATTGGAGTTTGGGGAAGGGCTACTGTaGGCGCTGTTTGGGCACGCCTATGCCTCCTCTTTT +
Preference number: 6 (lower is better)
Translates to: FPLSLEFGEGLL*ALFGHAYASSF
Trigger: AAAAGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000677198.1
ENST00000678063.1
ENST00000678150.1
ENST00000678420.1
ENST00000678711.1
CDS TCA 72 bp CCTCAGACTGTGCTTCTCCACAGCAAAGACCTGATCTaGTTTCCCTCCATGTCCCCAGTACCCAGCATAGAC +
Preference number: 6 (lower is better)
Translates to: PQTVLLHSKDLI*FPSMSPVPSID
Trigger: GTCTATGCTGGGTACTGGGGACATGGAGGGAAATCAGATCAGGTCTTTGCTGTGGAGAAGCACAGTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS TCA 72 bp TTTCGCTCTTGTCCTGCAGGCTGCTGTGCGATGGTGTaGTCTCGGCTCACTGCAACCTTTCAAGCGATTCTT +
Preference number: 6 (lower is better)
Translates to: FRSCPAGCCAMV*SRLTATFQAIL
Trigger: AAGAATCGCTTGAAAGGTTGCAGTGAGCCGAGATCACACCATCGCACAGCAGCCTGCAGGACAAGAGCGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS GCA 72 bp GGCACAATTCACAATCTGACTCAGGTGCTAGCTGTTTaGAAGTCTGTCTCCCCATGGGGGAAGGGACTGCAT +
Preference number: 6 (lower is better)
Translates to: GTIHNLTQVLAV*KSVSPWGKGLH
Trigger: ATGCAGTCCCTTCCCCCATGGGGAGACAGACTTGCAAACAGCTAGCACCTGAGTCAGATTGTGAATTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000678106.1
ENST00000678306.1
ENST00000679044.1
CDS GCA 72 bp ATGACGAAGTTCACCCGAGCCCTTGTCCTCTTGGGATaGCAAGTGAATCATCTCCCTGTTCAGCCCCAAAGA +
Preference number: 6 (lower is better)
Translates to: MTKFTRALVLLG*QVNHLPVQPQR
Trigger: TCTTTGGGGCTGAACAGGGAGATGATTCACTTGGCATCCCAAGAGGACAAGGGCTCGGGTGAACTTCGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677183.1
CDS CCA 72 bp CATTGTTGTCTGTGTGGGGCAGTAGATGTTAGGCCCTaGGCTCTAGAACTGTACCCTTTACCTCAACCCCAG +
Preference number: 6 (lower is better)
Translates to: HCCLCGAVDVRP*ALELYPLPQPQ
Trigger: CTGGGGTTGAGGTAAAGGGTACAGTTCTAGAGCCCAGGGCCTAACATCTACTGCCCCACACAGACAACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489353.6
ENST00000677676.1
CDS CCA 72 bp GGAGAGTGCACCTTCCACACTTGGCTGAGACCTCTATaGTGGCACAATTCACAATCTGACTCAGGTGCTAGC +
Preference number: 6 (lower is better)
Translates to: GECTFHTWLRPL*WHNSQSDSGAS
Trigger: GCTAGCACCTGAGTCAGATTGTGAATTGTGCCACCATAGAGGTCTCAGCCAAGTGTGGAAGGTGCACTCTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678106.1
ENST00000678306.1
ENST00000679044.1
CDS CAA 72 bp GTTTCATCATCTTGGCATCGACAGGTGGGTCCTGGCTaGGAACTGTTCTGCTTAGTGTTTGAGGCCACCTGG +
Preference number: 6 (lower is better)
Translates to: VSSSWHRQVGPG*ELFCLVFEATW
Trigger: CCAGGTGGCCTCAAACACTAAGCAGAACAGTTCCAAGCCAGGACCCACCTGTCGATGCCAAGATGATGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677701.1
CDS CAA 90 bp CCTGGGCCCAGCAGTTGTAGAAATTCTCGGAAAAGTCAGTTGTCCTaGAGCCTCAGTTTCATCATCTTGGCATCGACAGGTGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: PGPSSCRNSRKSQLS*SLSFIILASTGGSW
Trigger: CCAGGACCCACCTGTCGATGCCAAGATGATGAAACTGAGGCTCAAGGACAACTGACTTTTCCGAGAATTTCTACAACTGCTGGGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677701.1
CDS CAA 90 bp AGCCGACCTGGGCCCAGCAGTTGTAGAAATTCTCGGAAAAGTCAGTaGTCCTTGAGCCTCAGTTTCATCATCTTGGCATCGACAGGTGGG +
Preference number: 6 (lower is better)
Translates to: SRPGPSSCRNSRKSQ*SLSLSFIILASTGG
Trigger: CCCACCTGTCGATGCCAAGATGATGAAACTGAGGCTCAAGGACAACTGACTTTTCCGAGAATTTCTACAACTGCTGGGCCCAGGTCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677701.1
CDS CCA 72 bp TCGCGGTTATACTTAATCTGCGTAATGGACCGCTCATaGCCCTGCAGTAGGATCGGCTTTCGTCTGCATTCA +
Preference number: 6 (lower is better)
Translates to: SRLYLICVMDRS*PCSRIGFRLHS
Trigger: TGAATGCAGACGAAAGCCGATCCTACTGCAGGGCCATGAGCGGTCCATTACGCAGATTAAGTATAACCGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677772.1
ENST00000677844.1
CDS CAA 72 bp AGAAATATGACGAAGTTCACCCGAGCCCTTGTCCTCTaGGGATGCCAAGTGAATCATCTCCCTGTTCAGCCC +
Preference number: 6 (lower is better)
Translates to: RNMTKFTRALVL*GCQVNHLPVQP
Trigger: GGGCTGAACAGGGAGATGATTCACTTGGCATCCCAAGAGGACAAGGGCTCGGGTGAACTTCGTCATATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677183.1
CDS CAA 90 bp CAGCTGCTTTCCTGGAGTCAGGCAAAGTCTGGGCTACACCATCCATaGCAATTGCAGGGAGGACATTCTAGAGAATGCTACCATCACATC +
Preference number: 6 (lower is better)
Translates to: QLLSWSQAKSGLHHP*QLQGGHSRECYHHI
Trigger: GATGTGATGGTAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACTCCAGGAAAGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS CAA 90 bp CTTTCCTGGAGTCAGGCAAAGTCTGGGCTACACCATCCATTGCAATaGCAGGGAGGACATTCTAGAGAATGCTGTTTCACAGTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: LSWSQAKSGLHHPLQ*QGGHSRECCFTVPE
Trigger: CTCTGGGACTGTGAAACAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACTCCAGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676837.1
CDS CAA 90 bp CAGCTGCTTTCCTGGAGTCAGGCAAAGTCTGGGCTACACCATCCATaGCAATTGCAGGGAGGACATTCTAGAGAATGCTGTTTCACAGTC +
Preference number: 6 (lower is better)
Translates to: QLLSWSQAKSGLHHP*QLQGGHSRECCFTV
Trigger: GACTGTGAAACAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACTCCAGGAAAGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676837.1
CDS CAA 90 bp CCCCACCACTTACTCACTAGAAATTCTCGGAAAAGTCAGTTGTCCTaGAGCCTCAGTTTCATCATCTTGGCATCGACAGGTGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: PHHLLTRNSRKSQLS*SLSFIILASTGGSW
Trigger: CCAGGACCCACCTGTCGATGCCAAGATGATGAAACTGAGGCTCAAGGACAACTGACTTTTCCGAGAATTTCTAGTGAGTAAGTGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677760.1
CDS CAA 90 bp GAGTTGTTAAGAAATATGACGAAGTTCACCCGAGCCCTTGTCCTCTaGGGATGCCAAGTGAATCATCTCCCTGTTCAGCCCCAAAGAGCC +
Preference number: 6 (lower is better)
Translates to: ELLRNMTKFTRALVL*GCQVNHLPVQPQRA
Trigger: GGCTCTTTGGGGCTGAACAGGGAGATGATTCACTTGGCATCCCAAGAGGACAAGGGCTCGGGTGAACTTCGTCATATTTCTTAACAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677183.1
CDS CAA 72 bp TCCTGGAGTCAGGCAAAGTCTGGGCTACACCATCCATaGCAATTGCAGGGAGGACATTCTAGAGAATGCTAC +
Preference number: 6 (lower is better)
Translates to: SWSQAKSGLHHP*QLQGGHSRECY
Trigger: GTAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACTCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS CAA 72 bp TCCTGGAGTCAGGCAAAGTCTGGGCTACACCATCCATaGCAATTGCAGGGAGGACATTCTAGAGAATGCTGT +
Preference number: 6 (lower is better)
Translates to: SWSQAKSGLHHP*QLQGGHSRECC
Trigger: ACAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACTCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676837.1
CDS CAA 90 bp CTTTCCTGGAGTCAGGCAAAGTCTGGGCTACACCATCCATTGCAATaGCAGGGAGGACATTCTAGAGAATGCTACCATCACATCTCACTG +
Preference number: 6 (lower is better)
Translates to: LSWSQAKSGLHHPLQ*QGGHSRECYHHISL
Trigger: CAGTGAGATGTGATGGTAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACTCCAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS CCA 72 bp ACTCAGGTGCTAGCTGTTTGCAAGTCTGTCTCCCCATaGGGGAAGGGACTGCATCTGATTTACTTCTTTGTT +
Preference number: 6 (lower is better)
Translates to: TQVLAVCKSVSP*GKGLHLIYFFV
Trigger: AACAAAGAAGTAAATCAGATGCAGTCCCTTCCCCCATGGGGAGACAGACTTGCAAACAGCTAGCACCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678106.1
ENST00000678306.1
ENST00000679044.1
CDS CAA 72 bp AGTCAGGCAAAGTCTGGGCTACACCATCCATTGCAATaGCAGGGAGGACATTCTAGAGAATGCTACCATCAC +
Preference number: 6 (lower is better)
Translates to: SQAKSGLHHPLQ*QGGHSRECYHH
Trigger: GTGATGGTAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS CAA 72 bp AAAAGTCAGTTGTCCTTGAGCCTCAGTTTCATCATCTaGGCATCGACAGGTGGGTCCTGGCTTGGAACTGTT +
Preference number: 6 (lower is better)
Translates to: KSQLSLSLSFII*ASTGGSWLGTV
Trigger: AACAGTTCCAAGCCAGGACCCACCTGTCGATGCCAAGATGATGAAACTGAGGCTCAAGGACAACTGACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677701.1
ENST00000677760.1
CDS CAA 90 bp AATTCTCGGAAAAGTCAGTTGTCCTTGAGCCTCAGTTTCATCATCTaGGCATCGACAGGTGGGTCCTGGCTTGGAACTGTTCTGCTTAGT +
Preference number: 6 (lower is better)
Translates to: NSRKSQLSLSLSFII*ASTGGSWLGTVLLS
Trigger: ACTAAGCAGAACAGTTCCAAGCCAGGACCCACCTGTCGATGCCAAGATGATGAAACTGAGGCTCAAGGACAACTGACTTTTCCGAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677701.1
CDS CAA 72 bp AGTCAGGCAAAGTCTGGGCTACACCATCCATTGCAATaGCAGGGAGGACATTCTAGAGAATGCTGTTTCACA +
Preference number: 6 (lower is better)
Translates to: SQAKSGLHHPLQ*QGGHSRECCFT
Trigger: TGTGAAACAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATGGTGTAGCCCAGACTTTGCCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676837.1
CDS GCA 72 bp GACATCCTGCTAATGTGGCACTACTCATACGTAGACTaGAATATATCTGTCTCTCCCTCAGACTGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: DILLMWHYSYVD*NISVSPSDCAS
Trigger: AGAAGCACAGTCTGAGGGAGAGACAGATATATTGCAGTCTACGTATGAGTAGTGCCACATTAGCAGGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS GCA 72 bp CATCCATTGCAATTGCAGGGAGGACATTCTAGAGAATaGTACCATCACATCTCACTGTTTGTCTTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: HPLQLQGGHSRE*YHHISLFVLLQ
Trigger: CTGGAGCAAGACAAACAGTGAGATGTGATGGTAGCATTCTCTAGAATGTCCTCCCTGCAATTGCAATGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS CAA 72 bp ACCCCCTCTATCCTATCAGTCACCCCTAAATATCCCTaGACTCTGTCCAGTAATGTACATCCTATGCCTATT +
Preference number: 6 (lower is better)
Translates to: TPSILSVTPKYP*TLSSNVHPMPI
Trigger: AATAGGCATAGGATGTACATTACTGGACAGAGTCAAGGGATATTTAGGGGTGACTGATAGGATAGAGGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000678106.1
ENST00000678306.1
ENST00000679044.1
CDS CAA 72 bp AGCAGTTGTAGAAATTCTCGGAAAAGTCAGTTGTCCTaGAGCCTCAGTTTCATCATCTTGGCATCGACAGGT +
Preference number: 6 (lower is better)
Translates to: SSCRNSRKSQLS*SLSFIILASTG
Trigger: ACCTGTCGATGCCAAGATGATGAAACTGAGGCTCAAGGACAACTGACTTTTCCGAGAATTTCTACAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677701.1
CDS TCA 72 bp AGGTACACTGTAGGTCCTCAATATTTGCTAAAAAGGTaGATGAACCCAGCTTACCTGTTTCACAGTCCCAGA +
Preference number: 6 (lower is better)
Translates to: RYTVGPQYLLKR*MNPAYLFHSPR
Trigger: TCTGGGACTGTGAAACAGGTAAGCTGGGTTCATTCACCTTTTTAGCAAATATTGAGGACCTACAGTGTACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS GCA 72 bp AATCTGGCCATTGATAACCCTTTAAAGATTCCCTACTaGCTGGAGGAAAGTCAAAACTCTTTACCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: NLAIDNPLKIPY*LEESQNSLPPH
Trigger: GTGAGGAGGTAAAGAGTTTTGACTTTCCTCCAGGCAGTAGGGAATCTTTAAAGGGTTATCAATGGCCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678106.1
ENST00000678306.1
ENST00000679044.1
CDS CAA 72 bp TTACTCACTAGAAATTCTCGGAAAAGTCAGTTGTCCTaGAGCCTCAGTTTCATCATCTTGGCATCGACAGGT +
Preference number: 6 (lower is better)
Translates to: LLTRNSRKSQLS*SLSFIILASTG
Trigger: ACCTGTCGATGCCAAGATGATGAAACTGAGGCTCAAGGACAACTGACTTTTCCGAGAATTTCTAGTGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677760.1
CDS CAA 90 bp TGCAGGGAGGACATTCTAGAGAATGCTACCATCACATCTCACTGTTaGTCTTGCTCCAGTGACCCAAACTTAAAAAGTATTTTAACTTTT +
Preference number: 6 (lower is better)
Translates to: CREDILENATITSHC*SCSSDPNLKSILTF
Trigger: AAAAGTTAAAATACTTTTTAAGTTTGGGTCACTGGAGCAAGACAAACAGTGAGATGTGATGGTAGCATTCTCTAGAATGTCCTCCCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS CAA 72 bp GACATTCTAGAGAATGCTACCATCACATCTCACTGTTaGTCTTGCTCCAGTGACCCAAACTTAAAAAGTATT +
Preference number: 6 (lower is better)
Translates to: DILENATITSHC*SCSSDPNLKSI
Trigger: AATACTTTTTAAGTTTGGGTCACTGGAGCAAGACAAACAGTGAGATGTGATGGTAGCATTCTCTAGAATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS GCA 72 bp CTAGAGAATGCTACCATCACATCTCACTGTTTGTCTTaGTCCAGTGACCCAAACTTAAAAAGTATTTTAACT +
Preference number: 6 (lower is better)
Translates to: LENATITSHCLS*SSDPNLKSILT
Trigger: AGTTAAAATACTTTTTAAGTTTGGGTCACTGGAGCAAGACAAACAGTGAGATGTGATGGTAGCATTCTCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489353.6
CDS GCA 72 bp TTAGGCCTAGAACATAGTAAGTGCTCAATCTATGGCTaGCATTATTCACATTTTATTGTGATTCCTTCAGTT +
Preference number: 6 (lower is better)
Translates to: LGLEHSKCSIYG*HYSHFIVIPSV
Trigger: AACTGAAGGAATCACAATAAAATGTGAATAATGGCAGCCATAGATTGAGCACTTACTATGTTCTAGGCCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676801.1