RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF3F (Homo sapiens)

Ensembl gene IDs: ENSG00000175390

Ensembl transcript IDs: ENST00000528653.2, ENST00000528763.2, ENST00000530219.2, ENST00000531572.2, ENST00000532882.2, ENST00000533626.5, ENST00000640290.2, ENST00000651655.1, ENST00000677121.1, ENST00000677179.1, ENST00000677795.1, ENST00000677866.1, ENST00000678132.1, ENST00000678993.1

Found 535 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACACCTCTTCCTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTaGAGCCCTGTCTCTATCCTACTCCAGGTCACCTCACCCAACTCT +
Preference number: 1 (lower is better)
Translates to: TPLPSSQPGLQWGYR*SPVSILLQVTSPNS
Trigger: AGAGTTGGGTGAGGTGACCTGGAGTAGGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAGGAAGAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640290.2
3UTR CCA 90 bp CTCCACTTCCTGGGTTCAAGCCATTCTCACTTCAGCCCGAGTAGGTaGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTTTTGTATC +
Preference number: 1 (lower is better)
Translates to: LHFLGSSHSHFSPSR*DYRRPPRCLANFCI
Trigger: GATACAAAAATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGTGAGAATGGCTTGAACCCAGGAAGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR GCA 90 bp CTTTGCATTTGGCCTGGTCCCTTTAGAGGATTACTTCACACACGGTaGAGTGTCAGTGACGAGAGGACAGGACTCAATTACCCCGTAGAG +
Preference number: 1 (lower is better)
Translates to: LCIWPGPFRGLLHTR*SVSDERTGLNYPVE
Trigger: CTCTACGGGGTAATTGAGTCCTGTCCTCTCGTCACTGACACTGCACCGTGTGTGAAGTAATCCTCTAAAGGGACCAGGCCAAATGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677121.1
3UTR TCA 90 bp CAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGACATGCAGCATGTaGAAAAATTTGAATTGCCTGCTCTCCATGTTCCCAGCTGAGGTG +
Preference number: 1 (lower is better)
Translates to: QYLLGFCSHLRTCSM*KNLNCLLSMFPAEV
Trigger: CACCTCAGCTGGGAACATGGAGAGCAGGCAATTCAAATTTTTTCACATGCTGCATGTCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR GCA 90 bp TACATAGAGAGGGCTGTACCAACTTATATGTCTACCAGCAATCTGTaGCTGTGTCACGTTTCCTCTTACTCTGGCCATTCCAGTGTTAGC +
Preference number: 1 (lower is better)
Translates to: YIERAVPTYMSTSNL*LCHVSSYSGHSSVS
Trigger: GCTAACACTGGAATGGCCAGAGTAAGAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCCTCTCTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR TCA 90 bp ATAACCAACTTCTCTACCTACAATATTCACTTCCTAGTTTCTGTGTaGTCTAAAACATTTTCCTCCCTTCCACCCGGCAATAAACTCACA +
Preference number: 1 (lower is better)
Translates to: ITNFSTYNIHFLVSV*SKTFSSLPPGNKLT
Trigger: TGTGAGTTTATTGCCGGGTGGAAGGGAGGAAAATGTTTTAGATCACACAGAAACTAGGAAGTGAATATTGTAGGTAGAGAAGTTGGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR TCA 90 bp ATCAAGCTAGTTACATCCATCACCTCACATATTCATTTCTCCTGGTaGGATCTACTCCTAGCAATTTTCAAGTATACATTAACTAGTCAC +
Preference number: 1 (lower is better)
Translates to: IKLVTSITSHIHFSW*DLLLAIFKYTLTSH
Trigger: GTGACTAGTTAATGTATACTTGAAAATTGCTAGGAGTAGATCTCACCAGGAGAAATGAATATGTGAGGTGATGGATGTAACTAGCTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTTTTTGCTGCTTAAAGTaGCCCCCACGCACAGTGCCA +
Preference number: 2 (lower is better)
Translates to: TSARVGGITGALQDAWLIFCCLK*PPRTVP
Trigger: TGGCACTGTGCGTGGGGGTCACTTTAAGCAGCAAAA...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCCTCCATGTTCCCAGCTaGGGTGGAACAAGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFLHVPS*GGTRPS
Trigger: AGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAG...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTACTTCTGACCTCAAATaGTCCACCTGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: TSARVGGITGALQDAWLITSDLK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCATTTGAGGTCAGAAGT...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCTCACCCAGGCTGGGGTaGAGTGGTGCGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLSPRLG*SGAISA
Trigger: AGCTGAGATCGCACCACTGCACCCCAGCCTGGGTGA...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTCTCCCCGAACCAAAGTaGCAAAGAGCTCCATCTTAC +
Preference number: 2 (lower is better)
Translates to: TSARVGGITGALQDAWLILPEPK*QRAPSY
Trigger: GTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAG...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTTACATATCTCAGAACTaGGTTCCAGGCTGGGGTTCA +
Preference number: 2 (lower is better)
Translates to: TSARVGGITGALQDAWLIYISQN*VPGWGS
Trigger: TGAACCCCAGCCTGGAACTCAGTTCTGAGATATGTA...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTGGGTTGATGAAACTGTaGCCAGAGGTTCATAGGAAC +
Preference number: 2 (lower is better)
Translates to: TSARVGGITGALQDAWLIGLMKL*PEVHRN
Trigger: GTTCCTATGAACCTCTGGGCACAGTTTCATCAACCC...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTGGGGGCCTTTGCATTTaGCCTGGTCCCTTTAGAGGA +
Preference number: 2 (lower is better)
Translates to: PTDLNSASPNQSGKELHLGGLCI*PGPFRG
Trigger: TCCTCTAAAGGGACCAGGCCAAATGCAAAGGCCCCC...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677121.1
3UTR-3UTR TCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTTTGAACTTCTGGTCTTaGTTAACCCATCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TSARVGGITGALQDAWLILNFWS*LTHLSL
Trigger: CAGGCTGAGATGGGTTAATCAAGACCAGAAGTTCAA...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp TCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTCCTCAGTGGGGCTATAGGTaGAGCCCTGTCTCTATCCTA +
Preference number: 2 (lower is better)
Translates to: SWEKEGSLQPRITHLFLPQWGYR*SPVSIL
Trigger: TAGGATAGAGACAGGGCTTCACCTATAGCCCCACTG...AGGAAGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
3UTR-3UTR TCA 90 bp GGAATCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTCAGTGGGGCTATAGGTaGAGCCCTGTCTCTATCCTA +
Preference number: 2 (lower is better)
Translates to: GIMGEGRKSPTTHNTPLPQWGYR*SPVSIL
Trigger: TAGGATAGAGACAGGGCTTCACCTATAGCCCCACTG...AGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
3UTR-3UTR GCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCGGGTTGATGAAACTGTaGCCAGAGGTTCATAGGAAC +
Preference number: 2 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFGLMKL*PEVHRN
Trigger: GTTCCTATGAACCTCTGGGCACAGTTTCATCAACCC...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCAGCCTACAAGGCCTCTaGGAAATGCCATCTAGTCTT +
Preference number: 2 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFSLQGL*EMPSSL
Trigger: AAGACTAGATGGCATTTCCCAGAGGCCTTGTAGGCT...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp AGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTCCTCCCAACCTGGACTTGGTAGACACTGGGTATaGGGACAGCTGTGGATAAAT +
Preference number: 2 (lower is better)
Translates to: RKSPTTHNTPLPSSQPGLGRHWV*GQLWIN
Trigger: ATTTATCCACAGCTGTCCTCATACCCAGTGTCTACC...AAGTCCAGGTTGGGAGGAAGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
3UTR-3UTR GCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCGGTTCGAGATTCTCCTaGCTCAGCTTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLGSRFS*LSFPSS
Trigger: GCTACTTGGGAAGCTGAGGCAGGAGAATCTCGAACC...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTGGTTCGAGATTCTCCTaGCTCAGCTTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSGSRFS*LSFPSS
Trigger: GCTACTTGGGAAGCTGAGGCAGGAGAATCTCGAACC...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTCTCCCCGAACCAAAGTaGCAAAGAGCTCCATCTTAC +
Preference number: 2 (lower is better)
Translates to: PTDLNSASPNQSGKELHLLPEPK*QRAPSY
Trigger: GTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAG...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp GGAATCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTAGAATACACAATGAGTaGGGGGTTGGGTGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: GIMGEGRKSPTTHNTPLPRIHNE*GVGWKG
Trigger: CCCTTTCCACCCAACCCCCCACTCATTGTGTATTCT...AGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
3UTR-3UTR TCA 90 bp AGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTCCTCCCAACCTGGACTTACAGCTGTGGATAAATaGCAGCTAGGAGAGACTGAA +
Preference number: 2 (lower is better)
Translates to: RKSPTTHNTPLPSSQPGLTAVDK*QLGETE
Trigger: TTCAGTCTCTCCTAGCTGTCATTTATCCACAGCTGT...AAGTCCAGGTTGGGAGGAAGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
3UTR-3UTR TCA 90 bp GGAATCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTGGTAGACACTGGGTATaGGGACAGCTGTGGATAAAT +
Preference number: 2 (lower is better)
Translates to: GIMGEGRKSPTTHNTPLPGRHWV*GQLWIN
Trigger: ATTTATCCACAGCTGTCCTCATACCCAGTGTCTACC...AGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
3UTR-3UTR GCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGGGGACTACAGGTGCGTaGCACCACGCCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQGTTGA*HHAWLI
Trigger: AATTAGCCAGGCGTGGTGGCACGCACCTGTAGTCCC...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTTTACTTCACACACGGTaGAGTGTCAGTGACGAGAGG +
Preference number: 2 (lower is better)
Translates to: GLYQLICLPAICACVTFPLLHTR*SVSDER
Trigger: CCTCTCGTCACTGACACTGCACCGTGTGTGAAGTAA...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677121.1
3UTR-3UTR CCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTAGCCTACAAGGCCTCTaGGAAATGCCATCTAGTCTT +
Preference number: 2 (lower is better)
Translates to: PTDLNSASPNQSGKELHLSLQGL*EMPSSL
Trigger: AAGACTAGATGGCATTTCCCAGAGGCCTTGTAGGCT...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCGAGGAAATGGATGTCTaGAGTTACACAGGCAAGTAC +
Preference number: 2 (lower is better)
Translates to: VTQASTLAYKASGKCHLVEEMDV*SYTGKY
Trigger: GTACTTGCCTGTGTAACTTCAGACATCCATTTCCTC...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTGAGGAAATGGATGTCTaGAGTTACACAGGCAAGTAC +
Preference number: 2 (lower is better)
Translates to: PTDLNSASPNQSGKELHLEEMDV*SYTGKY
Trigger: GTACTTGCCTGTGTAACTTCAGACATCCATTTCCTC...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGCTCCATGTTCCCAGCTaGGGTGGAACAAGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQLHVPS*GGTRPS
Trigger: AGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAG...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTGGCTGGGGTTCATGTTaGTTATTACTTTCAAACTAT +
Preference number: 2 (lower is better)
Translates to: TSARVGGITGALQDAWLIGWGSC*LLLSNY
Trigger: ATAGTTTGAAAGTAATAAGCAACATGAACCCCAGCC...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTGGGTTGATGAAACTGTaGCCAGAGGTTCATAGGAAC +
Preference number: 2 (lower is better)
Translates to: GLYQLICLPAICACVTFPGLMKL*PEVHRN
Trigger: GTTCCTATGAACCTCTGGGCACAGTTTCATCAACCC...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAGACCCCCACGCACAGTaGCAAGTGTTCCTAAGTGCA +
Preference number: 2 (lower is better)
Translates to: FISNSSISTCWAFAAICGDPHAQ*QVFLSA
Trigger: TGCACTTAGGAACACTTGGCACTGTGCGTGGGGGTC...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTTGTTCCCAGCTGAGGTaGAACAAGGCCTTCTTGTTT +
Preference number: 2 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSCSQLR*NKAFLF
Trigger: AAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACA...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTGATGGACACTTAGGTTaGTGTCTTGGCGATTGTGAA +
Preference number: 2 (lower is better)
Translates to: GLYQLICLPAICACVTFPDGHLG*CLGDCE
Trigger: TTCACAATCGCCAAGACATCAACCTAAGTGTCCATC...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp AGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTCCTCCCAACCTGGACTTAGTATCAGCAGTAAATaGGACAATGGAATCATGGGA +
Preference number: 2 (lower is better)
Translates to: RKSPTTHNTPLPSSQPGLSISSK*DNGIMG
Trigger: TCCCATGATTCCATTGTCTCATTTACTGCTGATACT...AAGTCCAGGTTGGGAGGAAGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
3UTR-3UTR TCA 90 bp AACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCTACTCCAGGCTTTCTTATCTCTACTaGTACACTTATAGACTAGGG +
Preference number: 2 (lower is better)
Translates to: NLDFSGAIGEALSLSYSRLSYLY*YTYRLG
Trigger: CCCTAGTCTATAAGTGTATCAGTAGAGATAAGAAAG...CCTGGAGTAGGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
3UTR-3UTR GCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGAAGAAAAGGTTGTTTTaGCAATGGACACCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLKKRLF*QWTPFH
Trigger: ATGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTT...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTCCAAGTGTTCCTAAGTaGAAGAAGACTGTGATGTGC +
Preference number: 2 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSPSVPK*KKTVMC
Trigger: GCACATCACAGTCTTCTTGCACTTAGGAACACTTGG...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGGGTTCGAGATTCTCCTaGCTCAGCTTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQGSRFS*LSFPSS
Trigger: GCTACTTGGGAAGCTGAGGCAGGAGAATCTCGAACC...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCAGGTTGTTTTGCCAATaGACACCTTTCCATATTGAA +
Preference number: 2 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFRLFCQ*TPFHIE
Trigger: TTCAATATGGAAAGGTGTCCATTGGCAAAACAACCT...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTGGATACCAGAGGAAATaGATGTCTGAAGTTACACAG +
Preference number: 2 (lower is better)
Translates to: PTDLNSASPNQSGKELHLGYQRK*MSEVTQ
Trigger: CTGTGTAACTTCAGACATCCATTTCCTCTGGTATCC...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCGGATACCAGAGGAAATaGATGTCTGAAGTTACACAG +
Preference number: 2 (lower is better)
Translates to: VTQASTLAYKASGKCHLVGYQRK*MSEVTQ
Trigger: CTGTGTAACTTCAGACATCCATTTCCTCTGGTATCC...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCATGAGCCACTGTGCCTaGCTCCACTTTATCTTCAAT +
Preference number: 2 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLMSHCA*LHFIFN
Trigger: ATTGAAGATAAAGTGGAGCCAGGCACAGTGGCTCAT...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTCAGGCTGGGGTGCAGTaGTGCGATCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIQAGVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCACCACTGCACCCCAGCCTG...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTGAAATCTCCACTTCCTaGGTTCAAGCCATTCTCACT +
Preference number: 2 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSEISTS*VQAILT
Trigger: AGTGAGAATGGCTTGAACCCAGGAAGTGGAGATTTC...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp AACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCTACTCCAGGACCATCAAAAGGTCCTaGAAGACAAAGAATACACAA +
Preference number: 2 (lower is better)
Translates to: NLDFSGAIGEALSLSYSRTIKRS*KTKNTQ
Trigger: TTGTGTATTCTTTGTCTTCCAGGACCTTTTGATGGT...CCTGGAGTAGGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
3UTR-3UTR TCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCGAAACTTTGTACCCTTaGCCAACATCTCCCCATTTA +
Preference number: 2 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLETLYP*PTSPHL
Trigger: TAAATGGGGAGATGTTGGTCAAGGGTACAAAGTTTC...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTGAAACTTTGTACCCTTaGCCAACATCTCCCCATTTA +
Preference number: 2 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSETLYP*PTSPHL
Trigger: TAAATGGGGAGATGTTGGTCAAGGGTACAAAGTTTC...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTGAAACTTTGTACCCTTaGCCAACATCTCCCCATTTA +
Preference number: 2 (lower is better)
Translates to: GLYQLICLPAICACVTFPETLYP*PTSPHL
Trigger: TAAATGGGGAGATGTTGGTCAAGGGTACAAAGTTTC...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp AGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTCCTCCCAACCTGGACTTACAGCTAGGAGAGACTaGATAAAAGTCAAAAAGGTA +
Preference number: 2 (lower is better)
Translates to: RKSPTTHNTPLPSSQPGLTARRD*IKVKKV
Trigger: TACCTTTTTGACTTTTATTCAGTCTCTCCTAGCTGT...AAGTCCAGGTTGGGAGGAAGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
3UTR-3UTR GCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCCAGACTTATTTTACTTaGCATCCTCTTCTCACCACC +
Preference number: 2 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLQTYFT*HPLLTT
Trigger: GGTGGTGAGAAGAGGATGGCAAGTAAAATAAGTCTG...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTCAGACTTATTTTACTTaGCATCCTCTTCTCACCACC +
Preference number: 2 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSQTYFT*HPLLTT
Trigger: GGTGGTGAGAAGAGGATGGCAAGTAAAATAAGTCTG...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCCTCCCCGAACCAAAGTaGCAAAGAGCTCCATCTTAC +
Preference number: 2 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSLPEPK*QRAPSY
Trigger: GTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAG...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTCTCCCCGAACCAAAGTaGCAAAGAGCTCCATCTTAC +
Preference number: 2 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFLPEPK*QRAPSY
Trigger: GTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAG...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTCTATCTATCTTCTGTTaGTGGACACTTAGGTTGATG +
Preference number: 2 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSLSIFC*WTLRLM
Trigger: CATCAACCTAAGTGTCCATCAACAGAAGATAGATAG...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGCTGGTCAAGAACTTCTaGCCTCAAATGATCCACCTG +
Preference number: 2 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQLVKNF*PQMIHL
Trigger: CAGGTGGATCATTTGAGGTCAGAAGTTCTTGACCAG...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTATTCATTTCTCCTGGTaGGATCTACTCCTAGCAATT +
Preference number: 2 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSIHFSW*DLLLAI
Trigger: AATTGCTAGGAGTAGATCTCACCAGGAGAAATGAAT...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp GGAATCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTCTTTCTTATCTCTACTaGTACACTTATAGACTAGGG +
Preference number: 2 (lower is better)
Translates to: GIMGEGRKSPTTHNTPLPLSYLY*YTYRLG
Trigger: CCCTAGTCTATAAGTGTATCAGTAGAGATAAGAAAG...AGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
3UTR-3UTR GCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCAAGAAAAGGTTGTTTTaGCAATGGACACCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: VTQASTLAYKASGKCHLVKKRLF*QWTPFH
Trigger: ATGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTT...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCGGCTGGGGTTCATGTTaGTTATTACTTTCAAACTAT +
Preference number: 2 (lower is better)
Translates to: VTQASTLAYKASGKCHLVGWGSC*LLLSNY
Trigger: ATAGTTTGAAAGTAATAAGCAACATGAACCCCAGCC...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTGACCCCCACGCACAGTaGCAAGTGTTCCTAAGTGCA +
Preference number: 2 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIDPHAQ*QVFLSA
Trigger: TGCACTTAGGAACACTTGGCACTGTGCGTGGGGGTC...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCAGGTTGTTTTGCCAATaGACACCTTTCCATATTGAA +
Preference number: 2 (lower is better)
Translates to: VTQASTLAYKASGKCHLVRLFCQ*TPFHIE
Trigger: TTCAATATGGAAAGGTGTCCATTGGCAAAACAACCT...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAAGCCTACAAGGCCTCTaGGAAATGCCATCTAGTCTT +
Preference number: 2 (lower is better)
Translates to: FISNSSISTCWAFAAICGSLQGL*EMPSSL
Trigger: AAGACTAGATGGCATTTCCCAGAGGCCTTGTAGGCT...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGAGCCTACAAGGCCTCTaGGAAATGCCATCTAGTCTT +
Preference number: 2 (lower is better)
Translates to: LILPPRTKVAKSSILLLMSLQGL*EMPSSL
Trigger: AAGACTAGATGGCATTTCCCAGAGGCCTTGTAGGCT...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGATGTTCCCAGCTGAGGTaGAACAAGGCCTTCTTGTTT +
Preference number: 2 (lower is better)
Translates to: FISNSSISTCWAFAAICGCSQLR*NKAFLF
Trigger: AAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACA...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCGCCCTCCAAGATGCCTaGCTAATTTTTGTATCTTTT +
Preference number: 2 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLALQDA*LIFVSF
Trigger: AAAAGATACAAAAATTAGCCAGGCATCTTGGAGGGC...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAGAGGAAATGGATGTCTaGAGTTACACAGGCAAGTAC +
Preference number: 2 (lower is better)
Translates to: FISNSSISTCWAFAAICGEEMDV*SYTGKY
Trigger: GTACTTGCCTGTGTAACTTCAGACATCCATTTCCTC...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGGAGGAAATGGATGTCTaGAGTTACACAGGCAAGTAC +
Preference number: 2 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQEEMDV*SYTGKY
Trigger: GTACTTGCCTGTGTAACTTCAGACATCCATTTCCTC...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGACCACACTATGGTCATaGGTTCAGGTTGGGCTATTT +
Preference number: 2 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQTTLWS*VQVGLF
Trigger: AAATAGCCCAACCTGAACTCATGACCATAGTGTGGT...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTAAGAAAAGGTTGTTTTaGCAATGGACACCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: GLYQLICLPAICACVTFPKKRLF*QWTPFH
Trigger: ATGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTT...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTAAGAAAAGGTTGTTTTaGCAATGGACACCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSKKRLF*QWTPFH
Trigger: ATGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTT...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGACCAAGTGTTCCTAAGTaGAAGAAGACTGTGATGTGC +
Preference number: 2 (lower is better)
Translates to: FISNSSISTCWAFAAICGPSVPK*KKTVMC
Trigger: GCACATCACAGTCTTCTTGCACTTAGGAACACTTGG...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGACCCTCACCAACGCTTaGATTTTGAGTCTACTGAAC +
Preference number: 2 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQTLTNA*ILSLLN
Trigger: GTTCAGTAGACTCAAAATGCAAGCGTTGGTGAGGGT...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAGGTTGTTTTGCCAATaGACACCTTTCCATATTGAA +
Preference number: 2 (lower is better)
Translates to: KWMSEVTQASTLAYKASGRLFCQ*TPFHIE
Trigger: TTCAATATGGAAAGGTGTCCATTGGCAAAACAACCT...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTAGGTTGTTTTGCCAATaGACACCTTTCCATATTGAA +
Preference number: 2 (lower is better)
Translates to: GLYQLICLPAICACVTFPRLFCQ*TPFHIE
Trigger: TTCAATATGGAAAGGTGTCCATTGGCAAAACAACCT...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGATGAGCCACTGTGCCTaGCTCCACTTTATCTTCAAT +
Preference number: 2 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQMSHCA*LHFIFN
Trigger: ATTGAAGATAAAGTGGAGCCAGGCACAGTGGCTCAT...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCCGGACATGCAGCATGTaGAAAAATTTGAATTGCCTG +
Preference number: 2 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSRTCSM*KNLNCL
Trigger: CAGGCAATTCAAATTTTTTCACATGCTGCATGTCCG...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGCAGACTTATTTTACTTaGCATCCTCTTCTCACCACC +
Preference number: 2 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQQTYFT*HPLLTT
Trigger: GGTGGTGAGAAGAGGATGGCAAGTAAAATAAGTCTG...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTGGATACCAGAGGAAATaGATGTCTGAAGTTACACAG +
Preference number: 2 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFGYQRK*MSEVTQ
Trigger: CTGTGTAACTTCAGACATCCATTTCCTCTGGTATCC...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTCAACCTGTAGTTGGTTaGGTCCATAGATGTGGAACC +
Preference number: 2 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIQPVVG*VHRCGT
Trigger: GGTTCCACATCTATGGACTCAACCAACTACAGGTTG...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGCTATCTATCTTCTGTTaGTGGACACTTAGGTTGATG +
Preference number: 2 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQLSIFC*WTLRLM
Trigger: CATCAACCTAAGTGTCCATCAACAGAAGATAGATAG...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR TCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTACCACACTATGGTCATaGGTTCAGGTTGGGCTATTT +
Preference number: 2 (lower is better)
Translates to: VNNASVNVEVSLQHTDFITTLWS*VQVGLF
Trigger: AAATAGCCCAACCTGAACTCATGACCATAGTGTGGT...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGAAGAAAAGGTTGTTTTaGCAATGGACACCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: LILPPRTKVAKSSILLLMKKRLF*QWTPFH
Trigger: ATGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTT...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCGGCTGGGGTTCATGTTaGTTATTACTTTCAAACTAT +
Preference number: 2 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSGWGSC*LLLSNY
Trigger: ATAGTTTGAAAGTAATAAGCAACATGAACCCCAGCC...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAAGGTTGTTTTGCCAATaGACACCTTTCCATATTGAA +
Preference number: 2 (lower is better)
Translates to: FISNSSISTCWAFAAICGRLFCQ*TPFHIE
Trigger: TTCAATATGGAAAGGTGTCCATTGGCAAAACAACCT...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTAGTATCAGTACTTGCTaGGCTTTTGCAGCCATTTGC +
Preference number: 2 (lower is better)
Translates to: VNNASVNVEVSLQHTDFISISTC*AFAAIC
Trigger: GCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACT...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTATGAGCCACTGTGCCTaGCTCCACTTTATCTTCAAT +
Preference number: 2 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIMSHCA*LHFIFN
Trigger: ATTGAAGATAAAGTGGAGCCAGGCACAGTGGCTCAT...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR CAA 90 bp ATATACAGACAGCCAACCGCATGTCTAAACAAGTTTCACTTGTTTTaGAACTTCTGGAGTATCATAATGTACATGTCTTCTGACACCAGC +
Preference number: 2 (lower is better)
Translates to: IYRQPTACLNKFHLF*NFWSIIMYMSSDTS
Trigger: GCTGGTGTCAGAAGACATGTACATTATGATACTCCAGAAGTTCAAAAACAAGTGAAACTTGTTTAGACATGCGGTTGGCTGTCTGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR CAA 90 bp ACCCACATATACAGACAGCCAACCGCATGTCTAAACAAGTTTCACTaGTTTTTGAACTTCTGGAGTATCATAATGTACATGTCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: THIYRQPTACLNKFH*FLNFWSIIMYMSSD
Trigger: GTCAGAAGACATGTACATTATGATACTCCAGAAGTTCAAAAACAAGTGAAACTTGTTTAGACATGCGGTTGGCTGTCTGTATATGTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR GCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGGGACCAGTACCATATTaGTTTAATTACACAGTTCTA +
Preference number: 2 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQGPVPY*FNYTVL
Trigger: TAGAACTGTGTAATTAAAGCAATATGGTACTGGTCC...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR CAA 90 bp GGATATATACCCAGTAGTGGGATTGCTGGATCATATGTGTTTTTATaGAGGAAGCTCTACAAACTGTTTTCCACAATGTCTGTACTAATT +
Preference number: 2 (lower is better)
Translates to: GYIPSSGIAGSYVFL*RKLYKLFSTMSVLI
Trigger: AATTAGTACAGACATTGTGGAAAACAGTTTGTAGAGCTTCCTCAATAAAAACACATATGATCCAGCAATCCCACTACTGGGTATATATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTCGGGGTTTTGCCATGTaGGCCACGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: TSARVGGITGALQDAWLIRGFAM*ATLVLN
Trigger: GTTCAAGACCAGCGTGGCCAACATGGCAAAACCCCG...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCCGGGGTTTTGCCATGTaGGCCACGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFRGFAM*ATLVLN
Trigger: GTTCAAGACCAGCGTGGCCAACATGGCAAAACCCCG...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR TCA 72 bp CCTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTaGAGCCCTGTCTCTATCCTACTCCAGGTCACCTCA +
Preference number: 3 (lower is better)
Translates to: PSSQPGLQWGYR*SPVSILLQVTS
Trigger: TGAGGTGACCTGGAGTAGGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640290.2
3UTR CCA 72 bp CTGGGTTCAAGCCATTCTCACTTCAGCCCGAGTAGGTaGGATTACAGGCGCCCTCCAAGATGCCTGGCTAAT +
Preference number: 3 (lower is better)
Translates to: LGSSHSHFSPSR*DYRRPPRCLAN
Trigger: ATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGTGAGAATGGCTTGAACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTAGGATCCAGGCCTTTTaGATTCCCCATTGCCTTCAC +
Preference number: 3 (lower is better)
Translates to: TSARVGGITGALQDAWLIRIQAF*IPHCLH
Trigger: GTGAAGGCAATGGGGAATCAAAAAGGCCTGGATCCT...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR CCA 72 bp CAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATaGATGTCTGAAGTTACACAGGCAAGTACTCTAGCC +
Preference number: 3 (lower is better)
Translates to: QWRGGTPGYQRK*MSEVTQASTLA
Trigger: GGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCAGTATCCGTGGAGGATaGGTTCCAGAACCTTCCTTG +
Preference number: 3 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFSIRGG*VPEPSL
Trigger: CAAGGAAGGTTCTGGAACCAATCCTCCACGGATACT...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTCGGGGTTTTGCCATGTaGGCCACGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSRGFAM*ATLVLN
Trigger: GTTCAAGACCAGCGTGGCCAACATGGCAAAACCCCG...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp AGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTCCTCCCAACCTGGACTTGCAAAAAGGCTGGCTTaGGCCAGCTCTATGGTAGAC +
Preference number: 3 (lower is better)
Translates to: RKSPTTHNTPLPSSQPGLAKRLA*ASSMVD
Trigger: GTCTACCATAGAGCTGGCCAAAGCCAGCCTTTTTGC...AAGTCCAGGTTGGGAGGAAGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
3UTR-3UTR CAA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCCGGGGTTTCATCATGTaGGCCAGGCTGGTCAAGAAC +
Preference number: 3 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLRGFIM*ARLVKN
Trigger: GTTCTTGACCAGCCTGGCCAACATGATGAAACCCCG...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTTCACTCTTCTCACTCTaGTCGCTCAGGCTGGACTGC +
Preference number: 3 (lower is better)
Translates to: GLYQLICLPAICACVTFPSLFSL*SLRLDC
Trigger: GCAGTCCAGCCTGAGCGACAAGAGTGAGAAGAGTGA...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR GCA 72 bp TGGCCTGGTCCCTTTAGAGGATTACTTCACACACGGTaGAGTGTCAGTGACGAGAGGACAGGACTCAATTAC +
Preference number: 3 (lower is better)
Translates to: WPGPFRGLLHTR*SVSDERTGLNY
Trigger: GTAATTGAGTCCTGTCCTCTCGTCACTGACACTGCACCGTGTGTGAAGTAATCCTCTAAAGGGACCAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677121.1
3UTR-3UTR CAA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCAGGATCCAGGCCTTTTaGATTCCCCATTGCCTTCAC +
Preference number: 3 (lower is better)
Translates to: VTQASTLAYKASGKCHLVRIQAF*IPHCLH
Trigger: GTGAAGGCAATGGGGAATCAAAAAGGCCTGGATCCT...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTGTACTTGCTGGGCTTTaGCAGCCATTTGCGGACATG +
Preference number: 3 (lower is better)
Translates to: GLYQLICLPAICACVTFPVLAGL*QPFADM
Trigger: CATGTCCGCAAATGGCTGCAAAAGCCCAGCAAGTAC...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTACAGACTTATTTTACTaGCCATCCTCTTCTCACCAC +
Preference number: 3 (lower is better)
Translates to: TSARVGGITGALQDAWLITDLFY*PSSSHH
Trigger: GTGGTGAGAAGAGGATGGCAAGTAAAATAAGTCTGT...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTTACCCAGTAGTGGGATaGCTGGATCATATGTGTTTT +
Preference number: 3 (lower is better)
Translates to: TSARVGGITGALQDAWLIYPVVG*LDHMCF
Trigger: AAAACACATATGATCCAGCAATCCCACTACTGGGTA...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGCAAGAAAAGGTTGTTTaGCCAATGGACACCTTTCCA +
Preference number: 3 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLQEKVV*PMDTFP
Trigger: TGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTTG...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCCAAGAAAAGGTTGTTTaGCCAATGGACACCTTTCCA +
Preference number: 3 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFQEKVV*PMDTFP
Trigger: TGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTTG...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCAGGATCCAGGCCTTTTaGATTCCCCATTGCCTTCAC +
Preference number: 3 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLRIQAF*IPHCLH
Trigger: GTGAAGGCAATGGGGAATCAAAAAGGCCTGGATCCT...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCAGTATCCGTGGAGGATaGGTTCCAGAACCTTCCTTG +
Preference number: 3 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLSIRGG*VPEPSL
Trigger: CAAGGAAGGTTCTGGAACCAATCCTCCACGGATACT...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTACCAACGCTTGCATTTaGAGTCTACTGAACTATTTG +
Preference number: 3 (lower is better)
Translates to: TSARVGGITGALQDAWLITNACI*SLLNYL
Trigger: CAAATAGTTCAGTAGACTCAAAATGCAAGCGTTGGT...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR TCA 72 bp GGCCTCTGGGAAATGCCATCTAGTCTTTGCTTAAATTaGGCCACTGGCAGACCTCAGTATAACTCAAGGCTC +
Preference number: 3 (lower is better)
Translates to: GLWEMPSSLCLN*ATGRPQYNSRL
Trigger: GAGCCTTGAGTTATACTGAGGTCTGCCAGTGGCTCAATTTAAGCAAAGACTAGATGGCATTTCCCAGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR GCA 72 bp AGGGCTGTACCAACTTATATGTCTACCAGCAATCTGTaGCTGTGTCACGTTTCCTCTTACTCTGGCCATTCC +
Preference number: 3 (lower is better)
Translates to: RAVPTYMSTSNL*LCHVSSYSGHS
Trigger: GGAATGGCCAGAGTAAGAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCTTATGTACTGATGGGTaGATGAAACTGTGCCCAGAG +
Preference number: 3 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLLCTDG*MKLCPE
Trigger: CTCTGGGCACAGTTTCATCAACCCATCAGTACATAA...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCGTACTTGCTGGGCTTTaGCAGCCATTTGCGGACATG +
Preference number: 3 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSVLAGL*QPFADM
Trigger: CATGTCCGCAAATGGCTGCAAAAGCCCAGCAAGTAC...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR TCA 72 bp CTGGGCTTTTGCAGCCATTTGCGGACATGCAGCATGTaGAAAAATTTGAATTGCCTGCTCTCCATGTTCCCA +
Preference number: 3 (lower is better)
Translates to: LGFCSHLRTCSM*KNLNCLLSMFP
Trigger: TGGGAACATGGAGAGCAGGCAATTCAAATTTTTTCACATGCTGCATGTCCGCAAATGGCTGCAAAAGCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATAGGATCCAGGCCTTTTaGATTCCCCATTGCCTTCAC +
Preference number: 3 (lower is better)
Translates to: LNSASPNQSGKELHLTINRIQAF*IPHCLH
Trigger: GTGAAGGCAATGGGGAATCAAAAAGGCCTGGATCCT...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCAACCCTGTATTTCCCTaGGGAATAATGGTTCAGTAC +
Preference number: 3 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLNPVFP*GIMVQY
Trigger: GTACTGAACCATTATTCCCAAGGGAAATACAGGGTT...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTACAGACTTATTTTACTaGCCATCCTCTTCTCACCAC +
Preference number: 3 (lower is better)
Translates to: GLYQLICLPAICACVTFPTDLFY*PSSSHH
Trigger: GTGGTGAGAAGAGGATGGCAAGTAAAATAAGTCTGT...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR TCA 72 bp ACAACAGGTCTCCGGAACGTACTACTCCTGTTTAACTaGAACTTTGTACCCTTGACCAACATCTCCCCATTT +
Preference number: 3 (lower is better)
Translates to: TTGLRNVLLLFN*NFVPLTNISPF
Trigger: AAATGGGGAGATGTTGGTCAAGGGTACAAAGTTTCAGTTAAACAGGAGTAGTACGTTCCGGAGACCTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGCCTGTCATTATCATTTaGCCGATAAGATCTGTTTAC +
Preference number: 3 (lower is better)
Translates to: KWMSEVTQASTLAYKASGPVIII*PIRSVY
Trigger: GTAAACAGATCTTATCGGCAAAATGATAATGACAGG...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCTTATGTACTGATGGGTaGATGAAACTGTGCCCAGAG +
Preference number: 3 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSLCTDG*MKLCPE
Trigger: CTCTGGGCACAGTTTCATCAACCCATCAGTACATAA...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGTTATGTACTGATGGGTaGATGAAACTGTGCCCAGAG +
Preference number: 3 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQLCTDG*MKLCPE
Trigger: CTCTGGGCACAGTTTCATCAACCCATCAGTACATAA...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGATTATGTACTGATGGGTaGATGAAACTGTGCCCAGAG +
Preference number: 3 (lower is better)
Translates to: FISNSSISTCWAFAAICGLCTDG*MKLCPE
Trigger: CTCTGGGCACAGTTTCATCAACCCATCAGTACATAA...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTGTACTTGCTGGGCTTTaGCAGCCATTTGCGGACATG +
Preference number: 3 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIVLAGL*QPFADM
Trigger: CATGTCCGCAAATGGCTGCAAAAGCCCAGCAAGTAC...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTCTGATTTCATTTCCTTaGGATATATACCCAGTAGTG +
Preference number: 3 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSLISFP*DIYPVV
Trigger: CACTACTGGGTATATATCCAAAGGAAATGAAATCAG...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTAGGATCCAGGCCTTTTaGATTCCCCATTGCCTTCAC +
Preference number: 3 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLARIQAF*IPHCLH
Trigger: GTGAAGGCAATGGGGAATCAAAAAGGCCTGGATCCT...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGACCAACGCTTGCATTTaGAGTCTACTGAACTATTTG +
Preference number: 3 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQTNACI*SLLNYL
Trigger: CAAATAGTTCAGTAGACTCAAAATGCAAGCGTTGGT...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGACCTGTCATTATCATTTaGCCGATAAGATCTGTTTAC +
Preference number: 3 (lower is better)
Translates to: FISNSSISTCWAFAAICGPVIII*PIRSVY
Trigger: GTAAACAGATCTTATCGGCAAAATGATAATGACAGG...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR TCA 72 bp CCAGTAGTGGGATTGCTGGATCATATGTGTTTTTATTaGGGAAGCTCTACAAACTGTTTTCCACAATGTCTG +
Preference number: 3 (lower is better)
Translates to: PVVGLLDHMCFY*GSSTNCFPQCL
Trigger: CAGACATTGTGGAAAACAGTTTGTAGAGCTTCCTCAATAAAAACACATATGATCCAGCAATCCCACTACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTCAAGAAAAGGTTGTTTaGCCAATGGACACCTTTCCA +
Preference number: 3 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIQEKVV*PMDTFP
Trigger: TGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTTG...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTAACCCTGTATTTCCCTaGGGAATAATGGTTCAGTAC +
Preference number: 3 (lower is better)
Translates to: VNNASVNVEVSLQHTDFINPVFP*GIMVQY
Trigger: GTACTGAACCATTATTCCCAAGGGAAATACAGGGTT...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR TCA 72 bp CCACCTTTCTACACTCTGCTTGTGAGTTCAATTTTGTaGTTCCATATCCAAGTGAGATCATGGCTTATTTCA +
Preference number: 3 (lower is better)
Translates to: PPFYTLLVSSIL*FHIQVRSWLIS
Trigger: TGAAATAAGCCATGATCTCACTTGGATATGGAATCACAAAATTGAACTCACAAGCAGAGTGTAGAAAGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACCAAGAAAAGGTTGTTTaGCCAATGGACACCTTTCCA +
Preference number: 3 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYQEKVV*PMDTFP
Trigger: TGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTTG...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACATCCTCAAGAAAAGGTaGTTTTGCCAATGGACACCT +
Preference number: 3 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYILKKR*FCQWTP
Trigger: AGGTGTCCATTGGCAAAACAACCTTTTCTTGAGGAT...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR-3UTR CAA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTACCAACGCTTGCATTTaGAGTCTACTGAACTATTTG +
Preference number: 3 (lower is better)
Translates to: VNNASVNVEVSLQHTDFITNACI*SLLNYL
Trigger: CAAATAGTTCAGTAGACTCAAAATGCAAGCGTTGGT...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR TCA 72 bp GTATCTACCACTTATCTGTGCTTACTACATACCAGGTaGTATTCTCCACAAGTGTTGATTAACCTGACATTT +
Preference number: 3 (lower is better)
Translates to: VSTTYLCLLHTR*YSPQVLINLTF
Trigger: AAATGTCAGGTTAATCAACACTTGTGGAGAATATCACCTGGTATGTAGTAAGCACAGATAAGTGGTAGATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR CCA 72 bp CGAGACCAGTTTATTTGTAGGATATATAATGAGGAGTaGAATTCCTGGGTTAAGGGCATGCATATTTGTAAT +
Preference number: 3 (lower is better)
Translates to: RDQFICRIYNEE*NSWVKGMHICN
Trigger: ATTACAAATATGCATGCCCTTAACCCAGGAATTCCACTCCTCATTATATATCCTACAAATAAACTGGTCTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR CCA 72 bp ACCATGCTGTCTACTTTTAACCTACCTTTAACAATTTaGCCTGTCATTATCATTTTGCCGATAAGATCTGTT +
Preference number: 3 (lower is better)
Translates to: TMLSTFNLPLTI*PVIIILPIRSV
Trigger: AACAGATCTTATCGGCAAAATGATAATGACAGGCCAAATTGTTAAAGGTAGGTTAAAAGTAGACAGCATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCTACTCCAGGCGCTGGAGCTTGCGCTaGGGCCGGGGTCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NLDFSGAIGEALSLSYSRRWSLR*GRGLAR
Trigger: CCTGGCCAGACCCCGGCCTCAGCGCAAGCTCCAGCG...CCTGGAGTAGGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGCGCTGGAGCTTGCGCTaGGGCCGGGGTCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLRWSLR*GRGLAR
Trigger: CCTGGCCAGACCCCGGCCTCAGCGCAAGCTCCAGCG...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp CTCTTCCTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTGCGGGCGCTGGGGTCTaGGCTGGAGCTTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: LFLPPNLDFSGAIGEALSAGAGV*AGACAE
Trigger: CTCAGCGCAAGCTCCAGCGCAGACCCCAGCGCCCGC...AGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAGGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CCA 90 bp CTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCCGCCGGGACTGGGGTTaGCGTGGCCGGAGGAGCACT +
Preference number: 4 (lower is better)
Translates to: LPPNLDFSGAIGEALSLSRRDWG*RGRRST
Trigger: AGTGCTCCTCCGGCCACGCCAACCCCAGTCCCGGCG...GGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR GCA 90 bp CTCTTCCTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTGTCTGCGCTGGAGCTTaGGCTGAGGCCGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LFLPPNLDFSGAIGEALSVCAGA*AEAGVW
Trigger: CCAGACCCCGGCCTCAGCGCAAGCTCCAGCGCAGAC...AGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAGGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTAGGCAGAGCGGGCGCTaGGGTCTGCGCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TSARVGGITGALQDAWLIRQSGR*GLRWSL
Trigger: CAAGCTCCAGCGCAGACCCCAGCGCCCGCTCTGCCT...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCCGCTGGAGCTTGCGCTaGGGCCGGGGTCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VTQASTLAYKASGKCHLVRWSLR*GRGLAR
Trigger: CCTGGCCAGACCCCGGCCTCAGCGCAAGCTCCAGCG...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GGAATCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTCGCTGGAGCTTGCGCTaGGGCCGGGGTCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GIMGEGRKSPTTHNTPLPRWSLR*GRGLAR
Trigger: CCTGGCCAGACCCCGGCCTCAGCGCAAGCTCCAGCG...AGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR GCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCGTCTGCGCTGGAGCTTaGGCTGAGGCCGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFVCAGA*AEAGVW
Trigger: CCAGACCCCGGCCTCAGCGCAAGCTCCAGCGCAGAC...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCTACTCCAGGGTCTGCGCTGGAGCTTaGGCTGAGGCCGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: NLDFSGAIGEALSLSYSRVCAGA*AEAGVW
Trigger: CCAGACCCCGGCCTCAGCGCAAGCTCCAGCGCAGAC...CCTGGAGTAGGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR GCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGGTCTGCGCTGGAGCTTaGGCTGAGGCCGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLVCAGA*AEAGVW
Trigger: CCAGACCCCGGCCTCAGCGCAAGCTCCAGCGCAGAC...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp CCCTTTAGAGGATTACTTCACACACGGTGCAGTGTCAGTGACGAGAGGACAGGAGCGGGCGCTGGGGTCTaGGCTGGAGCTTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PFRGLLHTRCSVSDERTGAGAGV*AGACAE
Trigger: CTCAGCGCAAGCTCCAGCGCAGACCCCAGCGCCCGC...TCCTGTCCTCTCGTCACTGACACTGCACCGTGTGTGAAGTAATCCTCTAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677121.1
CDS-3UTR CCA 90 bp AACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCTACTCCAGGAGGCAGAGCGGGCGCTaGGGTCTGCGCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: NLDFSGAIGEALSLSYSRRQSGR*GLRWSL
Trigger: CAAGCTCCAGCGCAGACCCCAGCGCCCGCTCTGCCT...CCTGGAGTAGGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCAGGCAGAGCGGGCGCTaGGGTCTGCGCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFRQSGR*GLRWSL
Trigger: CAAGCTCCAGCGCAGACCCCAGCGCCCGCTCTGCCT...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGAGGCAGAGCGGGCGCTaGGGTCTGCGCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLRQSGR*GLRWSL
Trigger: CAAGCTCCAGCGCAGACCCCAGCGCCCGCTCTGCCT...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTCGCTGGAGCTTGCGCTaGGGCCGGGGTCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSRWSLR*GRGLAR
Trigger: CCTGGCCAGACCCCGGCCTCAGCGCAAGCTCCAGCG...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCGCGGGCGCTGGGGTCTaGGCTGGAGCTTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: NPQILILPPRTKVAKSSIAGAGV*AGACAE
Trigger: CTCAGCGCAAGCTCCAGCGCAGACCCCAGCGCCCGC...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCGGACTGGGGTTGGCGTaGCCGGAGGAGCACTTACTG +
Preference number: 4 (lower is better)
Translates to: LPPNLDFSGAIGEALSLSGLGLA*PEEHLL
Trigger: CAGTAAGTGCTCCTCCGGCCACGCCAACCCCAGTCC...GGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CCA 90 bp GGAATCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTCGCCGGGACTGGGGTTaGCGTGGCCGGAGGAGCACT +
Preference number: 4 (lower is better)
Translates to: GIMGEGRKSPTTHNTPLPRRDWG*RGRRST
Trigger: AGTGCTCCTCCGGCCACGCCAACCCCAGTCCCGGCG...AGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCCGCCGGGACTGGGGTTaGCGTGGCCGGAGGAGCACT +
Preference number: 4 (lower is better)
Translates to: VTQASTLAYKASGKCHLVRRDWG*RGRRST
Trigger: AGTGCTCCTCCGGCCACGCCAACCCCAGTCCCGGCG...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCGTCTGCGCTGGAGCTTaGGCTGAGGCCGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VTQASTLAYKASGKCHLVVCAGA*AEAGVW
Trigger: CCAGACCCCGGCCTCAGCGCAAGCTCCAGCGCAGAC...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCCGCCGGGACTGGGGTTaGCGTGGCCGGAGGAGCACT +
Preference number: 4 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLRRDWG*RGRRST
Trigger: AGTGCTCCTCCGGCCACGCCAACCCCAGTCCCGGCG...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCGCCGGGACTGGGGTTaGCGTGGCCGGAGGAGCACT +
Preference number: 4 (lower is better)
Translates to: GLYQLICLPAICACVTFPRRDWG*RGRRST
Trigger: AGTGCTCCTCCGGCCACGCCAACCCCAGTCCCGGCG...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GGAATCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTAGGCAGAGCGGGCGCTaGGGTCTGCGCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GIMGEGRKSPTTHNTPLPRQSGR*GLRWSL
Trigger: CAAGCTCCAGCGCAGACCCCAGCGCCCGCTCTGCCT...AGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTAGGCAGAGCGGGCGCTaGGGTCTGCGCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PTDLNSASPNQSGKELHLRQSGR*GLRWSL
Trigger: CAAGCTCCAGCGCAGACCCCAGCGCCCGCTCTGCCT...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATCGCTGGAGCTTGCGCTaGGGCCGGGGTCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINRWSLR*GRGLAR
Trigger: CCTGGCCAGACCCCGGCCTCAGCGCAAGCTCCAGCG...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTGACCCCCACGCACAGTaGCAAGTGTTCCTAAGTGCA +
Preference number: 4 (lower is better)
Translates to: TSARVGGITGALQDAWLIDPHAQ*QVFLSA
Trigger: TGCACTTAGGAACACTTGGCACTGTGCGTGGGGGTC...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTTCTTGTCGCTCAGGCTaGACTGCAGTGGCGGAATCT +
Preference number: 4 (lower is better)
Translates to: TSARVGGITGALQDAWLISCRSG*TAVAES
Trigger: AGATTCCGCCACTGCAGTCCAGCCTGAGCGACAAGA...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCACGGTGCAGTGTCAGTaGCGAGAGGACAGGACTCAA +
Preference number: 4 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFTVQCQ*REDRTQ
Trigger: TTGAGTCCTGTCCTCTCGTCACTGACACTGCACCGT...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677121.1
CDS-3UTR GCA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCGCGGGCGCTGGGGTCTaGGCTGGAGCTTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSAGAGV*AGACAE
Trigger: CTCAGCGCAAGCTCCAGCGCAGACCCCAGCGCCCGC...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGGCGGGCGCTGGGGTCTaGGCTGGAGCTTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMAGAGV*AGACAE
Trigger: CTCAGCGCAAGCTCCAGCGCAGACCCCAGCGCCCGC...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTGGTTCGAGATTCTCCTaGCTCAGCTTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: TSARVGGITGALQDAWLIGSRFS*LSFPSS
Trigger: GCTACTTGGGAAGCTGAGGCAGGAGAATCTCGAACC...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCTCACCCAGGCTGGGGTaGAGTGGTGCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VTQASTLAYKASGKCHLVSPRLG*SGAISA
Trigger: AGCTGAGATCGCACCACTGCACCCCAGCCTGGGTGA...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTCGCCGGGACTGGGGTTaGCGTGGCCGGAGGAGCACT +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFRRDWG*RGRRST
Trigger: AGTGCTCCTCCGGCCACGCCAACCCCAGTCCCGGCG...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCCAGGCTGGGGTGCAGTaGTGCGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VTQASTLAYKASGKCHLVQAGVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCACCACTGCACCCCAGCCTG...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTTCACCCAGGCTGGGGTaGAGTGGTGCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSSPRLG*SGAISA
Trigger: AGCTGAGATCGCACCACTGCACCCCAGCCTGGGTGA...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGAGGCAGAGCGGGCGCTaGGGTCTGCGCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQRQSGR*GLRWSL
Trigger: CAAGCTCCAGCGCAGACCCCAGCGCCCGCTCTGCCT...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTCAGGCTGGGGTGCAGTaGTGCGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSQAGVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCACCACTGCACCCCAGCCTG...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp TGGAAAGGGAGCAAAAAGGCTGGCTTTGGCCAGCTCTATGGTAGACACTGGGTACAGTGGGGCTATAGGTaGAGCCCTGTCTCTATCCTA +
Preference number: 4 (lower is better)
Translates to: WKGSKKAGFGQLYGRHWVQWGYR*SPVSIL
Trigger: TAGGATAGAGACAGGGCTTCACCTATAGCCCCACTG...TACCCAGTGTCTACCATAGAGCTGGCCAAAGCCAGCCTTTTTGCTCCCTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp CTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCGGTAGACACTGGGTATaGGGACAGCTGTGGATAAAT +
Preference number: 4 (lower is better)
Translates to: LPPNLDFSGAIGEALSLSGRHWV*GQLWIN
Trigger: ATTTATCCACAGCTGTCCTCATACCCAGTGTCTACC...GGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTCGCTGGAGCTTGCGCTaGGGCCGGGGTCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIRWSLR*GRGLAR
Trigger: CCTGGCCAGACCCCGGCCTCAGCGCAAGCTCCAGCG...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTCTCCATGTTCCCAGCTaGGGTGGAACAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PTDLNSASPNQSGKELHLLHVPS*GGTRPS
Trigger: AGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAG...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCCTCCATGTTCCCAGCTaGGGTGGAACAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NPQILILPPRTKVAKSSILHVPS*GGTRPS
Trigger: AGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAG...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCGACCCCCACGCACAGTaGCAAGTGTTCCTAAGTGCA +
Preference number: 4 (lower is better)
Translates to: VTQASTLAYKASGKCHLVDPHAQ*QVFLSA
Trigger: TGCACTTAGGAACACTTGGCACTGTGCGTGGGGGTC...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCTACTCCAGGAGAATACACAATGAGTaGGGGGTTGGGTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: NLDFSGAIGEALSLSYSRRIHNE*GVGWKG
Trigger: CCCTTTCCACCCAACCCCCCACTCATTGTGTATTCT...CCTGGAGTAGGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACAACCCCACTCCTGTaGCTGCACCCAGAAGCGATT +
Preference number: 4 (lower is better)
Translates to: PTDLNSASPNQSGKELHLTTPLL*LHPEAI
Trigger: AATCGCTTCTGGGTGCAGCCACAGGAGTGGGGTTGT...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR CCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGCAGCTGCCGCCAGGTaGAACCAGAAAGCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINAAAAR*NQKAAR
Trigger: CCGCGCTGCTTTCTGGTTCCACCTGGCGGCAGCTGC...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR CCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCGTTCCGGGTAAAACTTaGGACGGCGTTCGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFVPGKT*DGVRRE
Trigger: TTCTCTTCGAACGCCGTCCCAAGTTTTACCCGGAAC...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR CCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTAGCCTACAAGGCCTCTaGGAAATGCCATCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: TSARVGGITGALQDAWLISLQGL*EMPSSL
Trigger: AAGACTAGATGGCATTTCCCAGAGGCCTTGTAGGCT...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGTGCAGAGGGACAGCTTaGATTCCCACTCACTTCATC +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLCRGTA*IPTHFI
Trigger: GATGAAGTGAGTGGGAATCCAAGCTGTCCCTCTGCA...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678132.1
CDS-3UTR TCA 90 bp TGGAAAGGGAGCAAAAAGGCTGGCTTTGGCCAGCTCTATGGTAGACACTGGGTATTTGAGTGTATGTGCTaGGGTGGGGGAAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: WKGSKKAGFGQLYGRHWVFECMC*GGGRNQ
Trigger: CTGGTTTCTTCCCCCACCTCAGCACATACACTCAAA...TACCCAGTGTCTACCATAGAGCTGGCCAAAGCCAGCCTTTTTGCTCCCTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp CTCTTCCTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTACAGCTGTGGATAAATaGCAGCTAGGAGAGACTGAA +
Preference number: 4 (lower is better)
Translates to: LFLPPNLDFSGAIGEALSTAVDK*QLGETE
Trigger: TTCAGTCTCTCCTAGCTGTCATTTATCCACAGCTGT...AGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp AACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCTACTCCAGGGGTAGACACTGGGTATaGGGACAGCTGTGGATAAAT +
Preference number: 4 (lower is better)
Translates to: NLDFSGAIGEALSLSYSRGRHWV*GQLWIN
Trigger: ATTTATCCACAGCTGTCCTCATACCCAGTGTCTACC...CCTGGAGTAGGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGCAACCTGTAGTTGGTTaGGTCCATAGATGTGGAACC +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLQPVVG*VHRCGT
Trigger: GGTTCCACATCTATGGACTCAACCAACTACAGGTTG...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTTTGCTGCTTAAAGTaGCCCCCACGCACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: NPQILILPPRTKVAKSSIFCCLK*PPRTVP
Trigger: TGGCACTGTGCGTGGGGGTCACTTTAAGCAGCAAAA...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTTTTTGCTGCTTAAAGTaGCCCCCACGCACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PTDLNSASPNQSGKELHLFCCLK*PPRTVP
Trigger: TGGCACTGTGCGTGGGGGTCACTTTAAGCAGCAAAA...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTTCTGACCTCAAATaGTCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PTDLNSASPNQSGKELHLTSDLK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCATTTGAGGTCAGAAGT...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCAACACTTTGTGCAGCTaGCGCCAGGTGGAACCAGAA +
Preference number: 4 (lower is better)
Translates to: VTQASTLAYKASGKCHLVNTLCS*RQVEPE
Trigger: TTCTGGTTCCACCTGGCGGCAGCTGCACAAAGTGTT...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR GCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTCCAAGTGTTCCTAAGTaGAAGAAGACTGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: TSARVGGITGALQDAWLIPSVPK*KKTVMC
Trigger: GCACATCACAGTCTTCTTGCACTTAGGAACACTTGG...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGGACCCCCACGCACAGTaGCAAGTGTTCCTAAGTGCA +
Preference number: 4 (lower is better)
Translates to: KWMSEVTQASTLAYKASGDPHAQ*QVFLSA
Trigger: TGCACTTAGGAACACTTGGCACTGTGCGTGGGGGTC...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCGGTTCGAGATTCTCCTaGCTCAGCTTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: VTQASTLAYKASGKCHLVGSRFS*LSFPSS
Trigger: GCTACTTGGGAAGCTGAGGCAGGAGAATCTCGAACC...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTACCCTCACCAACGCTTaGATTTTGAGTCTACTGAAC +
Preference number: 4 (lower is better)
Translates to: TSARVGGITGALQDAWLITLTNA*ILSLLN
Trigger: GTTCAGTAGACTCAAAATGCAAGCGTTGGTGAGGGT...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp TGGAAAGGGAGCAAAAAGGCTGGCTTTGGCCAGCTCTATGGTAGACACTGGGTAAGAATACACAATGAGTaGGGGGTTGGGTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: WKGSKKAGFGQLYGRHWVRIHNE*GVGWKG
Trigger: CCCTTTCCACCCAACCCCCCACTCATTGTGTATTCT...TACCCAGTGTCTACCATAGAGCTGGCCAAAGCCAGCCTTTTTGCTCCCTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTCGCCGGGACTGGGGTTaGCGTGGCCGGAGGAGCACT +
Preference number: 4 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIRRDWG*RGRRST
Trigger: AGTGCTCCTCCGGCCACGCCAACCCCAGTCCCGGCG...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGAGCCTACAAGGCCTCTaGGAAATGCCATCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLSLQGL*EMPSSL
Trigger: AAGACTAGATGGCATTTCCCAGAGGCCTTGTAGGCT...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTATGAGCCACTGTGCCTaGCTCCACTTTATCTTCAAT +
Preference number: 4 (lower is better)
Translates to: TSARVGGITGALQDAWLIMSHCA*LHFIFN
Trigger: ATTGAAGATAAAGTGGAGCCAGGCACAGTGGCTCAT...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTTCTTGTCGCTCAGGCTaGACTGCAGTGGCGGAATCT +
Preference number: 4 (lower is better)
Translates to: GLYQLICLPAICACVTFPSCRSG*TAVAES
Trigger: AGATTCCGCCACTGCAGTCCAGCCTGAGCGACAAGA...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GGAATCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTTTGAGTGTATGTGCTaGGGTGGGGGAAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: GIMGEGRKSPTTHNTPLPFECMC*GGGRNQ
Trigger: CTGGTTTCTTCCCCCACCTCAGCACATACACTCAAA...AGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp CTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCAACTCTTTTCACATTTaGGTGTATGTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LPPNLDFSGAIGEALSLSNSFHI*VYVLRW
Trigger: CCACCTCAGCACATACACTCAAATGTGAAAAGAGTT...GGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCTACTTCTCGGAGCACTaGAATAGTCCCGCCGTTGGT +
Preference number: 4 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLYFSEH*NSPAVG
Trigger: ACCAACGGCGGGACTATTTCAGTGCTCCGAGAAGTA...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR TCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGGAGGAAATGGATGTCTaGAGTTACACAGGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLEEMDV*SYTGKY
Trigger: GTACTTGCCTGTGTAACTTCAGACATCCATTTCCTC...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGTTTTGCTGCTTAAAGTaGCCCCCACGCACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: KWMSEVTQASTLAYKASGFCCLK*PPRTVP
Trigger: TGGCACTGTGCGTGGGGGTCACTTTAAGCAGCAAAA...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGACCACACTATGGTCATaGGTTCAGGTTGGGCTATTT +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLTTLWS*VQVGLF
Trigger: AAATAGCCCAACCTGAACTCATGACCATAGTGTGGT...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTGGGGAGCCGAGCAAATaGACAGCTAAAAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: PTDLNSASPNQSGKELHLGEPSK*TAKNCR
Trigger: TCTGCAGTTTTTAGCTGTTCATTTGCTCGGCTCCCC...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678132.1
CDS-3UTR GCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACGCGGGCGCTGGGGTCTaGGCTGGAGCTTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYAGAGV*AGACAE
Trigger: CTCAGCGCAAGCTCCAGCGCAGACCCCAGCGCCCGC...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGCCAAGTGTTCCTAAGTaGAAGAAGACTGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLPSVPK*KKTVMC
Trigger: GCACATCACAGTCTTCTTGCACTTAGGAACACTTGG...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGTCACCCAGGCTGGGGTaGAGTGGTGCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQSPRLG*SGAISA
Trigger: AGCTGAGATCGCACCACTGCACCCCAGCCTGGGTGA...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCATGAGCCACTGTGCCTaGCTCCACTTTATCTTCAAT +
Preference number: 4 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFMSHCA*LHFIFN
Trigger: ATTGAAGATAAAGTGGAGCCAGGCACAGTGGCTCAT...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATCAGGCTGGGGTGCAGTaGTGCGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINQAGVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCACCACTGCACCCCAGCCTG...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTGGGGTTTCATCATGTTaGCCAGGCTGGTCAAGAACT +
Preference number: 4 (lower is better)
Translates to: PTDLNSASPNQSGKELHLGVSSC*PGWSRT
Trigger: AGTTCTTGACCAGCCTGGCCAACATGATGAAACCCC...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGGAAATCTCCACTTCCTaGGTTCAAGCCATTCTCACT +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLEISTS*VQAILT
Trigger: AGTGAGAATGGCTTGAACCCAGGAAGTGGAGATTTC...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGGAGGAGTGGAATTCCTaGGTTAAGGGCATGCATATT +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLEEWNS*VKGMHI
Trigger: AATATGCATGCCCTTAACCCAGGAATTCCACTCCTC...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp TCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTCCTTGCAGAGGGACAGCTTaGATTCCCACTCACTTCATC +
Preference number: 4 (lower is better)
Translates to: SWEKEGSLQPRITHLFLPCRGTA*IPTHFI
Trigger: GATGAAGTGAGTGGGAATCCAAGCTGTCCCTCTGCA...AGGAAGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640290.2
CDS-3UTR TCA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTACATATCTCAGAACTaGGTTCCAGGCTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: NPQILILPPRTKVAKSSIYISQN*VPGWGS
Trigger: TGAACCCCAGCCTGGAACTCAGTTCTGAGATATGTA...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCCAACCTGTAGTTGGTTaGGTCCATAGATGTGGAACC +
Preference number: 4 (lower is better)
Translates to: VTQASTLAYKASGKCHLVQPVVG*VHRCGT
Trigger: GGTTCCACATCTATGGACTCAACCAACTACAGGTTG...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCCGGACATGCAGCATGTaGAAAAATTTGAATTGCCTG +
Preference number: 4 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFRTCSM*KNLNCL
Trigger: CAGGCAATTCAAATTTTTTCACATGCTGCATGTCCG...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp ACAATGGAATCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCGGGGAGCCGAGCAAATaGACAGCTAAAAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: TMESWEKEGSLQPRITHLGEPSK*TAKNCR
Trigger: TCTGCAGTTTTTAGCTGTTCATTTGCTCGGCTCCCC...GAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGATTCCATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640290.2
CDS-3UTR CCA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGCTCCCCGAACCAAAGTaGCAAAGAGCTCCATCTTAC +
Preference number: 4 (lower is better)
Translates to: KWMSEVTQASTLAYKASGLPEPK*QRAPSY
Trigger: GTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAG...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCGGATACCAGAGGAAATaGATGTCTGAAGTTACACAG +
Preference number: 4 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFGYQRK*MSEVTQ
Trigger: CTGTGTAACTTCAGACATCCATTTCCTCTGGTATCC...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTGCCCTCCAAGATGCCTaGCTAATTTTTGTATCTTTT +
Preference number: 4 (lower is better)
Translates to: TSARVGGITGALQDAWLIALQDA*LIFVSF
Trigger: AAAAGATACAAAAATTAGCCAGGCATCTTGGAGGGC...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp CTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCCTTTCTTATCTCTACTaGTACACTTATAGACTAGGG +
Preference number: 4 (lower is better)
Translates to: LPPNLDFSGAIGEALSLSLSYLY*YTYRLG
Trigger: CCCTAGTCTATAAGTGTATCAGTAGAGATAAGAAAG...GGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp TCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTCCTACAGCTGTGGATAAATaGCAGCTAGGAGAGACTGAA +
Preference number: 4 (lower is better)
Translates to: SWEKEGSLQPRITHLFLPTAVDK*QLGETE
Trigger: TTCAGTCTCTCCTAGCTGTCATTTATCCACAGCTGT...AGGAAGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCTACATATCTCAGAACTaGGTTCCAGGCTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLYISQN*VPGWGS
Trigger: TGAACCCCAGCCTGGAACTCAGTTCTGAGATATGTA...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTTACATATCTCAGAACTaGGTTCCAGGCTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSYISQN*VPGWGS
Trigger: TGAACCCCAGCCTGGAACTCAGTTCTGAGATATGTA...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCCAACCTGTAGTTGGTTaGGTCCATAGATGTGGAACC +
Preference number: 4 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLQPVVG*VHRCGT
Trigger: GGTTCCACATCTATGGACTCAACCAACTACAGGTTG...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCACCACACTATGGTCATaGGTTCAGGTTGGGCTATTT +
Preference number: 4 (lower is better)
Translates to: VTQASTLAYKASGKCHLVTTLWS*VQVGLF
Trigger: AAATAGCCCAACCTGAACTCATGACCATAGTGTGGT...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTGAACTTCTGGTCTTaGTTAACCCATCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NPQILILPPRTKVAKSSILNFWS*LTHLSL
Trigger: CAGGCTGAGATGGGTTAATCAAGACCAGAAGTTCAA...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTTTGAACTTCTGGTCTTaGTTAACCCATCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PTDLNSASPNQSGKELHLLNFWS*LTHLSL
Trigger: CAGGCTGAGATGGGTTAATCAAGACCAGAAGTTCAA...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGCTATCTATCTTCTGTTaGTGGACACTTAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLLSIFC*WTLRLM
Trigger: CATCAACCTAAGTGTCCATCAACAGAAGATAGATAG...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGTTGTGTGTCTGTGTGTaGGCTGTCTGGTCATATCCT +
Preference number: 4 (lower is better)
Translates to: KWMSEVTQASTLAYKASGLCVCV*AVWSYP
Trigger: AGGATATGACCAGACAGCTCACACACAGACACACAA...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTTTGTGTGTCTGTGTGTaGGCTGTCTGGTCATATCCT +
Preference number: 4 (lower is better)
Translates to: GLYQLICLPAICACVTFPLCVCV*AVWSYP
Trigger: AGGATATGACCAGACAGCTCACACACAGACACACAA...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTTTGTGTGTCTGTGTGTaGGCTGTCTGGTCATATCCT +
Preference number: 4 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSLCVCV*AVWSYP
Trigger: AGGATATGACCAGACAGCTCACACACAGACACACAA...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCCCAAGTGTTCCTAAGTaGAAGAAGACTGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: NPQILILPPRTKVAKSSIPSVPK*KKTVMC
Trigger: GCACATCACAGTCTTCTTGCACTTAGGAACACTTGG...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTGACCCCCACGCACAGTaGCAAGTGTTCCTAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFDPHAQ*QVFLSA
Trigger: TGCACTTAGGAACACTTGGCACTGTGCGTGGGGGTC...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCGACCCCCACGCACAGTaGCAAGTGTTCCTAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSDPHAQ*QVFLSA
Trigger: TGCACTTAGGAACACTTGGCACTGTGCGTGGGGGTC...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAGGCGCCCTCCAAGATaGCTGGCTAATTTTTGTATC +
Preference number: 4 (lower is better)
Translates to: KWMSEVTQASTLAYKASGRRPPR*LANFCI
Trigger: GATACAAAAATTAGCCAGGCATCTTGGAGGGCGCCT...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTCTTCCTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTACCATCAAAAGGTCCTaGAAGACAAAGAATACACAA +
Preference number: 4 (lower is better)
Translates to: LFLPPNLDFSGAIGEALSTIKRS*KTKNTQ
Trigger: TTGTGTATTCTTTGTCTTCCAGGACCTTTTGATGGT...AGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAGGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCAGCCTACAAGGCCTCTaGGAAATGCCATCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLSLQGL*EMPSSL
Trigger: AAGACTAGATGGCATTTCCCAGAGGCCTTGTAGGCT...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTTGTTCCCAGCTGAGGTaGAACAAGGCCTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: GLYQLICLPAICACVTFPCSQLR*NKAFLF
Trigger: AAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACA...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGTGTTCCCAGCTGAGGTaGAACAAGGCCTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: KWMSEVTQASTLAYKASGCSQLR*NKAFLF
Trigger: AAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACA...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCATGAGCCACTGTGCCTaGCTCCACTTTATCTTCAAT +
Preference number: 4 (lower is better)
Translates to: NPQILILPPRTKVAKSSIMSHCA*LHFIFN
Trigger: ATTGAAGATAAAGTGGAGCCAGGCACAGTGGCTCAT...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCGCCCTCCAAGATGCCTaGCTAATTTTTGTATCTTTT +
Preference number: 4 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFALQDA*LIFVSF
Trigger: AAAAGATACAAAAATTAGCCAGGCATCTTGGAGGGC...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCGAAATCTCCACTTCCTaGGTTCAAGCCATTCTCACT +
Preference number: 4 (lower is better)
Translates to: NPQILILPPRTKVAKSSIEISTS*VQAILT
Trigger: AGTGAGAATGGCTTGAACCCAGGAAGTGGAGATTTC...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTCTTGTCGCTCAGGCTaGACTGCAGTGGCGGAATCT +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMSCRSG*TAVAES
Trigger: AGATTCCGCCACTGCAGTCCAGCCTGAGCGACAAGA...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCGAGGAGTGGAATTCCTaGGTTAAGGGCATGCATATT +
Preference number: 4 (lower is better)
Translates to: NPQILILPPRTKVAKSSIEEWNS*VKGMHI
Trigger: AATATGCATGCCCTTAACCCAGGAATTCCACTCCTC...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGGGGGCCTTTGCATTTaGCCTGGTCCCTTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINGGLCI*PGPFRG
Trigger: TCCTCTAAAGGGACCAGGCCAAATGCAAAGGCCCCC...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677121.1
CDS-3UTR TCA 90 bp TCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTCCTAACTCTTTTCACATTTaGGTGTATGTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SWEKEGSLQPRITHLFLPNSFHI*VYVLRW
Trigger: CCACCTCAGCACATACACTCAAATGTGAAAAGAGTT...AGGAAGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp AACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCTACTCCAGGACAGCTAGGAGAGACTaGATAAAAGTCAAAAAGGTA +
Preference number: 4 (lower is better)
Translates to: NLDFSGAIGEALSLSYSRTARRD*IKVKKV
Trigger: TACCTTTTTGACTTTTATTCAGTCTCTCCTAGCTGT...CCTGGAGTAGGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTGAGGAAATGGATGTCTaGAGTTACACAGGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: GLYQLICLPAICACVTFPEEMDV*SYTGKY
Trigger: GTACTTGCCTGTGTAACTTCAGACATCCATTTCCTC...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTACCACACTATGGTCATaGGTTCAGGTTGGGCTATTT +
Preference number: 4 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSTTLWS*VQVGLF
Trigger: AAATAGCCCAACCTGAACTCATGACCATAGTGTGGT...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGACCACACTATGGTCATaGGTTCAGGTTGGGCTATTT +
Preference number: 4 (lower is better)
Translates to: KWMSEVTQASTLAYKASGTTLWS*VQVGLF
Trigger: AAATAGCCCAACCTGAACTCATGACCATAGTGTGGT...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGTTGAACTTCTGGTCTTaGTTAACCCATCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KWMSEVTQASTLAYKASGLNFWS*LTHLSL
Trigger: CAGGCTGAGATGGGTTAATCAAGACCAGAAGTTCAA...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTACTTCTGACCTCAAATaGTCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFTSDLK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCATTTGAGGTCAGAAGT...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGACTTCTGACCTCAAATaGTCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMTSDLK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCATTTGAGGTCAGAAGT...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAACTTCTGACCTCAAATaGTCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FISNSSISTCWAFAAICGTSDLK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCATTTGAGGTCAGAAGT...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCGAAACTTTGTACCCTTaGCCAACATCTCCCCATTTA +
Preference number: 4 (lower is better)
Translates to: NPQILILPPRTKVAKSSIETLYP*PTSPHL
Trigger: TAAATGGGGAGATGTTGGTCAAGGGTACAAAGTTTC...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGGGCTGGGGTTCATGTTaGTTATTACTTTCAAACTAT +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLGWGSC*LLLSNY
Trigger: ATAGTTTGAAAGTAATAAGCAACATGAACCCCAGCC...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAGGTTCGAGATTCTCCTaGCTCAGCTTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: FISNSSISTCWAFAAICGGSRFS*LSFPSS
Trigger: GCTACTTGGGAAGCTGAGGCAGGAGAATCTCGAACC...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGCCTGGGTTAAGGGCATaGATATTTGTAATTTTGACA +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLPGLRA*IFVILT
Trigger: TGTCAAAATTACAAATATGCATGCCCTTAACCCAGG...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGAGGTTGTTTTGCCAATaGACACCTTTCCATATTGAA +
Preference number: 4 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLRLFCQ*TPFHIE
Trigger: TTCAATATGGAAAGGTGTCCATTGGCAAAACAACCT...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTGAGGAGTGGAATTCCTaGGTTAAGGGCATGCATATT +
Preference number: 4 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSEEWNS*VKGMHI
Trigger: AATATGCATGCCCTTAACCCAGGAATTCCACTCCTC...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GGAATCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTAGTATCAGCAGTAAATaGGACAATGGAATCATGGGA +
Preference number: 4 (lower is better)
Translates to: GIMGEGRKSPTTHNTPLPSISSK*DNGIMG
Trigger: TCCCATGATTCCATTGTCTCATTTACTGCTGATACT...AGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTGCTAGAGCTTTTTGCTaGTTGGTTACTGGTGATACT +
Preference number: 4 (lower is better)
Translates to: GLYQLICLPAICACVTFPARAFC*LVTGDT
Trigger: AGTATCACCAGTAACCAATCAGCAAAAAGCTCTAGC...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR TCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCGGACATGCAGCATGTaGAAAAATTTGAATTGCCTG +
Preference number: 4 (lower is better)
Translates to: GLYQLICLPAICACVTFPRTCSM*KNLNCL
Trigger: CAGGCAATTCAAATTTTTTCACATGCTGCATGTCCG...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTCGGACATGCAGCATGTaGAAAAATTTGAATTGCCTG +
Preference number: 4 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSRTCSM*KNLNCL
Trigger: CAGGCAATTCAAATTTTTTCACATGCTGCATGTCCG...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCCTATCTATCTTCTGTTaGTGGACACTTAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: NPQILILPPRTKVAKSSILSIFC*WTLRLM
Trigger: CATCAACCTAAGTGTCCATCAACAGAAGATAGATAG...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTATTCATTTCTCCTGGTaGGATCTACTCCTAGCAATT +
Preference number: 4 (lower is better)
Translates to: PTDLNSASPNQSGKELHLIHFSW*DLLLAI
Trigger: AATTGCTAGGAGTAGATCTCACCAGGAGAAATGAAT...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAAAGAGAAACACTTTGTaGAGCTGCCGCCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: FISNSSISTCWAFAAICGKRNTL*SCRQVE
Trigger: TTCCACCTGGCGGCAGCTGCACAAAGTGTTTCTCTT...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR GCA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTTCACCCAGGCTGGGGTaGAGTGGTGCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLASPRLG*SGAISA
Trigger: AGCTGAGATCGCACCACTGCACCCCAGCCTGGGTGA...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCGGACCAGTACCATATTaGTTTAATTACACAGTTCTA +
Preference number: 4 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFGPVPY*FNYTVL
Trigger: TAGAACTGTGTAATTAAAGCAATATGGTACTGGTCC...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp CCCTTTAGAGGATTACTTCACACACGGTGCAGTGTCAGTGACGAGAGGACAGGACCTGGGTTAAGGGCATaGATATTTGTAATTTTGACA +
Preference number: 4 (lower is better)
Translates to: PFRGLLHTRCSVSDERTGPGLRA*IFVILT
Trigger: TGTCAAAATTACAAATATGCATGCCCTTAACCCAGG...TCCTGTCCTCTCGTCACTGACACTGCACCGTGTGTGAAGTAATCCTCTAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677121.1
CDS-3UTR GCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTTTACTTCACACACGGTaGAGTGTCAGTGACGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFLLHTR*SVSDER
Trigger: CCTCTCGTCACTGACACTGCACCGTGTGTGAAGTAA...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677121.1
CDS-3UTR CCA 90 bp AGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTCCTCCCAACCTGGACTTACCATCAAAAGGTCCTaGAAGACAAAGAATACACAA +
Preference number: 4 (lower is better)
Translates to: RKSPTTHNTPLPSSQPGLTIKRS*KTKNTQ
Trigger: TTGTGTATTCTTTGTCTTCCAGGACCTTTTGATGGT...AAGTCCAGGTTGGGAGGAAGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGCTCCCCGAACCAAAGTaGCAAAGAGCTCCATCTTAC +
Preference number: 4 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQLPEPK*QRAPSY
Trigger: GTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAG...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATCTCCCCGAACCAAAGTaGCAAAGAGCTCCATCTTAC +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINLPEPK*QRAPSY
Trigger: GTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAG...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCGGATACCAGAGGAAATaGATGTCTGAAGTTACACAG +
Preference number: 4 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLGYQRK*MSEVTQ
Trigger: CTGTGTAACTTCAGACATCCATTTCCTCTGGTATCC...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTGGGGTTTCATCATGTTaGCCAGGCTGGTCAAGAACT +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFGVSSC*PGWSRT
Trigger: AGTTCTTGACCAGCCTGGCCAACATGATGAAACCCC...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGGGGGTTTCATCATGTTaGCCAGGCTGGTCAAGAACT +
Preference number: 4 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQGVSSC*PGWSRT
Trigger: AGTTCTTGACCAGCCTGGCCAACATGATGAAACCCC...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp TCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTCCTACAGCTAGGAGAGACTaGATAAAAGTCAAAAAGGTA +
Preference number: 4 (lower is better)
Translates to: SWEKEGSLQPRITHLFLPTARRD*IKVKKV
Trigger: TACCTTTTTGACTTTTATTCAGTCTCTCCTAGCTGT...AGGAAGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR TCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTACATATCTCAGAACTaGGTTCCAGGCTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMYISQN*VPGWGS
Trigger: TGAACCCCAGCCTGGAACTCAGTTCTGAGATATGTA...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCCAACCTGTAGTTGGTTaGGTCCATAGATGTGGAACC +
Preference number: 4 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSQPVVG*VHRCGT
Trigger: GGTTCCACATCTATGGACTCAACCAACTACAGGTTG...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGCTATCTATCTTCTGTTaGTGGACACTTAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: KWMSEVTQASTLAYKASGLSIFC*WTLRLM
Trigger: CATCAACCTAAGTGTCCATCAACAGAAGATAGATAG...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTATTCATTTCTCCTGGTaGGATCTACTCCTAGCAATT +
Preference number: 4 (lower is better)
Translates to: GLYQLICLPAICACVTFPIHFSW*DLLLAI
Trigger: AATTGCTAGGAGTAGATCTCACCAGGAGAAATGAAT...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTGGAATTTGTGCGCTCTaGTTTTGGCCCGAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIGICAL*FWPEEH
Trigger: GTGCTCCTCGGGCCAAAAGCAGAGCGCACAAATTCC...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR GCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTAAGAAAAGGTTGTTTTaGCAATGGACACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: PTDLNSASPNQSGKELHLKKRLF*QWTPFH
Trigger: ATGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTT...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAGGGTTGATGAAACTGTaGCCAGAGGTTCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: FISNSSISTCWAFAAICGGLMKL*PEVHRN
Trigger: GTTCCTATGAACCTCTGGGCACAGTTTCATCAACCC...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTGGGTTGATGAAACTGTaGCCAGAGGTTCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFGLMKL*PEVHRN
Trigger: GTTCCTATGAACCTCTGGGCACAGTTTCATCAACCC...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGGGGTTGATGAAACTGTaGCCAGAGGTTCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMGLMKL*PEVHRN
Trigger: GTTCCTATGAACCTCTGGGCACAGTTTCATCAACCC...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTGCTTTTGCAGCCATTTaGGGACATGCAGCATGTGAA +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFAFAAI*GHAACE
Trigger: TTCACATGCTGCATGTCCGCAAATGGCTGCAAAAGC...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGGCTTTTGCAGCCATTTaGGGACATGCAGCATGTGAA +
Preference number: 4 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQAFAAI*GHAACE
Trigger: TTCACATGCTGCATGTCCGCAAATGGCTGCAAAAGC...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGGCTTTTGCAGCCATTTaGGGACATGCAGCATGTGAA +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMAFAAI*GHAACE
Trigger: TTCACATGCTGCATGTCCGCAAATGGCTGCAAAAGC...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCGCTTTTGCAGCCATTTaGGGACATGCAGCATGTGAA +
Preference number: 4 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSAFAAI*GHAACE
Trigger: TTCACATGCTGCATGTCCGCAAATGGCTGCAAAAGC...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAGCTTTTGCAGCCATTTaGGGACATGCAGCATGTGAA +
Preference number: 4 (lower is better)
Translates to: FISNSSISTCWAFAAICGAFAAI*GHAACE
Trigger: TTCACATGCTGCATGTCCGCAAATGGCTGCAAAAGC...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTAGGCGCCCTCCAAGATaGCTGGCTAATTTTTGTATC +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFRRPPR*LANFCI
Trigger: GATACAAAAATTAGCCAGGCATCTTGGAGGGCGCCT...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGAGGCGCCCTCCAAGATaGCTGGCTAATTTTTGTATC +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMRRPPR*LANFCI
Trigger: GATACAAAAATTAGCCAGGCATCTTGGAGGGCGCCT...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGAGGCGCCCTCCAAGATaGCTGGCTAATTTTTGTATC +
Preference number: 4 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQRRPPR*LANFCI
Trigger: GATACAAAAATTAGCCAGGCATCTTGGAGGGCGCCT...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTCCTGGGTTAAGGGCATaGATATTTGTAATTTTGACA +
Preference number: 4 (lower is better)
Translates to: PTDLNSASPNQSGKELHLPGLRA*IFVILT
Trigger: TGTCAAAATTACAAATATGCATGCCCTTAACCCAGG...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTTTTTCCCTCAACCATaGCTCCACCTGGACCAACAA +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMFFPQP*LHLDQQ
Trigger: TTGTTGGTCCAGGTGGAGCCATGGTTGAGGGAAAAA...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR CCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATAGCCTACAAGGCCTCTaGGAAATGCCATCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINSLQGL*EMPSSL
Trigger: AAGACTAGATGGCATTTCCCAGAGGCCTTGTAGGCT...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTTGTTCCCAGCTGAGGTaGAACAAGGCCTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFCSQLR*NKAFLF
Trigger: AAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACA...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATTGTTCCCAGCTGAGGTaGAACAAGGCCTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINCSQLR*NKAFLF
Trigger: AAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACA...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTGTTCCCAGCTGAGGTaGAACAAGGCCTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMCSQLR*NKAFLF
Trigger: AAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACA...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCATATATAATGAGGAGTaGAATTCCTGGGTTAAGGGC +
Preference number: 4 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLIYNEE*NSWVKG
Trigger: GCCCTTAACCCAGGAATTCCACTCCTCATTATATAT...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGATATATAATGAGGAGTaGAATTCCTGGGTTAAGGGC +
Preference number: 4 (lower is better)
Translates to: KWMSEVTQASTLAYKASGIYNEE*NSWVKG
Trigger: GCCCTTAACCCAGGAATTCCACTCCTCATTATATAT...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CCCTTTAGAGGATTACTTCACACACGGTGCAGTGTCAGTGACGAGAGGACAGGACTGGTAATAGTCATTTaGGTTGATTACCATCTTTAC +
Preference number: 4 (lower is better)
Translates to: PFRGLLHTRCSVSDERTGLVIVI*VDYHLY
Trigger: GTAAAGATGGTAATCAACCCAAATGACTATTACCAG...TCCTGTCCTCTCGTCACTGACACTGCACCGTGTGTGAAGTAATCCTCTAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677121.1
CDS-3UTR TCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTTTTTGCTGCTTAAAGTaGCCCCCACGCACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIFCCLK*PPRTVP
Trigger: TGGCACTGTGCGTGGGGGTCACTTTAAGCAGCAAAA...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTCTCCATGTTCCCAGCTaGGGTGGAACAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLALHVPS*GGTRPS
Trigger: AGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAG...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAACCACACTATGGTCATaGGTTCAGGTTGGGCTATTT +
Preference number: 4 (lower is better)
Translates to: FISNSSISTCWAFAAICGTTLWS*VQVGLF
Trigger: AAATAGCCCAACCTGAACTCATGACCATAGTGTGGT...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTGATGGACACTTAGGTTaGTGTCTTGGCGATTGTGAA +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFDGHLG*CLGDCE
Trigger: TTCACAATCGCCAAGACATCAACCTAAGTGTCCATC...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGGATGGACACTTAGGTTaGTGTCTTGGCGATTGTGAA +
Preference number: 4 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQDGHLG*CLGDCE
Trigger: TTCACAATCGCCAAGACATCAACCTAAGTGTCCATC...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTGGCTGGGGTTCATGTTaGTTATTACTTTCAAACTAT +
Preference number: 4 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSGWGSC*LLLSNY
Trigger: ATAGTTTGAAAGTAATAAGCAACATGAACCCCAGCC...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGCCAAGTGTTCCTAAGTaGAAGAAGACTGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMPSVPK*KKTVMC
Trigger: GCACATCACAGTCTTCTTGCACTTAGGAACACTTGG...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCGGACCAGTACCATATTaGTTTAATTACACAGTTCTA +
Preference number: 4 (lower is better)
Translates to: NPQILILPPRTKVAKSSIGPVPY*FNYTVL
Trigger: TAGAACTGTGTAATTAAAGCAATATGGTACTGGTCC...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATACCCTCACCAACGCTTaGATTTTGAGTCTACTGAAC +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINTLTNA*ILSLLN
Trigger: GTTCAGTAGACTCAAAATGCAAGCGTTGGTGAGGGT...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAACCCTCACCAACGCTTaGATTTTGAGTCTACTGAAC +
Preference number: 4 (lower is better)
Translates to: FISNSSISTCWAFAAICGTLTNA*ILSLLN
Trigger: GTTCAGTAGACTCAAAATGCAAGCGTTGGTGAGGGT...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCAGTATCAGTACTTGCTaGGCTTTTGCAGCCATTTGC +
Preference number: 4 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSSISTC*AFAAIC
Trigger: GCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACT...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTAGTATCAGTACTTGCTaGGCTTTTGCAGCCATTTGC +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFSISTC*AFAAIC
Trigger: GCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACT...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATAGTATCAGTACTTGCTaGGCTTTTGCAGCCATTTGC +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINSISTC*AFAAIC
Trigger: GCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACT...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCATGAGCCACTGTGCCTaGCTCCACTTTATCTTCAAT +
Preference number: 4 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSMSHCA*LHFIFN
Trigger: ATTGAAGATAAAGTGGAGCCAGGCACAGTGGCTCAT...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGATGAGCCACTGTGCCTaGCTCCACTTTATCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMMSHCA*LHFIFN
Trigger: ATTGAAGATAAAGTGGAGCCAGGCACAGTGGCTCAT...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTCGGACATGCAGCATGTaGAAAAATTTGAATTGCCTG +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFRTCSM*KNLNCL
Trigger: CAGGCAATTCAAATTTTTTCACATGCTGCATGTCCG...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAGAAACTTTGTACCCTTaGCCAACATCTCCCCATTTA +
Preference number: 4 (lower is better)
Translates to: FISNSSISTCWAFAAICGETLYP*PTSPHL
Trigger: TAAATGGGGAGATGTTGGTCAAGGGTACAAAGTTTC...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGACTACTCCTGTTTAACTaGAACTTTGTACCCTTGACC +
Preference number: 4 (lower is better)
Translates to: FISNSSISTCWAFAAICGLLLFN*NFVPLT
Trigger: GGTCAAGGGTACAAAGTTTCAGTTAAACAGGAGTAG...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGCTACTCCTGTTTAACTaGAACTTTGTACCCTTGACC +
Preference number: 4 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQLLLFN*NFVPLT
Trigger: GGTCAAGGGTACAAAGTTTCAGTTAAACAGGAGTAG...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATCTACTCCTGTTTAACTaGAACTTTGTACCCTTGACC +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINLLLFN*NFVPLT
Trigger: GGTCAAGGGTACAAAGTTTCAGTTAAACAGGAGTAG...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGCAGACTTATTTTACTTaGCATCCTCTTCTCACCACC +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMQTYFT*HPLLTT
Trigger: GGTGGTGAGAAGAGGATGGCAAGTAAAATAAGTCTG...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACGGTTCGAGATTCTCCTaGCTCAGCTTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYGSRFS*LSFPSS
Trigger: GCTACTTGGGAAGCTGAGGCAGGAGAATCTCGAACC...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTGGACCAGTACCATATTaGTTTAATTACACAGTTCTA +
Preference number: 4 (lower is better)
Translates to: GLYQLICLPAICACVTFPGPVPY*FNYTVL
Trigger: TAGAACTGTGTAATTAAAGCAATATGGTACTGGTCC...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTGTGATAGTAGTTTCTTaGCTGTACCTTCACAAATAT +
Preference number: 4 (lower is better)
Translates to: GLYQLICLPAICACVTFPVIVVS*LYLHKY
Trigger: ATATTTGTGAAGGTACAGCCAAGAAACTACTATCAC...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTGTGATAGTAGTTTCTTaGCTGTACCTTCACAAATAT +
Preference number: 4 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSVIVVS*LYLHKY
Trigger: ATATTTGTGAAGGTACAGCCAAGAAACTACTATCAC...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR CAA 72 bp ACAGAAACACATGTAACAAGTTTATGTACTGATGGGTaGATGAAACTGTGCCCAGAGGTTCATAGGAACCCA +
Preference number: 4 (lower is better)
Translates to: TETHVTSLCTDG*MKLCPEVHRNP
Trigger: TGGGTTCCTATGAACCTCTGGGCACAGTTTCATCAACCCATCAGTACATAAACTTGTTACATGTGTTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCCTATCTATCTTCTGTTaGTGGACACTTAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSLSIFC*WTLRLM
Trigger: CATCAACCTAAGTGTCCATCAACAGAAGATAGATAG...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCATTCATTTCTCCTGGTaGGATCTACTCCTAGCAATT +
Preference number: 4 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSIHFSW*DLLLAI
Trigger: AATTGCTAGGAGTAGATCTCACCAGGAGAAATGAAT...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTGCCCTCCAAGATGCCTaGCTAATTTTTGTATCTTTT +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFALQDA*LIFVSF
Trigger: AAAAGATACAAAAATTAGCCAGGCATCTTGGAGGGC...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGCCCTCCAAGATGCCTaGCTAATTTTTGTATCTTTT +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINALQDA*LIFVSF
Trigger: AAAAGATACAAAAATTAGCCAGGCATCTTGGAGGGC...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTATATATAATGAGGAGTaGAATTCCTGGGTTAAGGGC +
Preference number: 4 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFIYNEE*NSWVKG
Trigger: GCCCTTAACCCAGGAATTCCACTCCTCATTATATAT...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACTACATATCTCAGAACTaGGTTCCAGGCTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYYISQN*VPGWGS
Trigger: TGAACCCCAGCCTGGAACTCAGTTCTGAGATATGTA...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTCAACCTGTAGTTGGTTaGGTCCATAGATGTGGAACC +
Preference number: 4 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLAQPVVG*VHRCGT
Trigger: GGTTCCACATCTATGGACTCAACCAACTACAGGTTG...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTGATGGACACTTAGGTTaGTGTCTTGGCGATTGTGAA +
Preference number: 4 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIDGHLG*CLGDCE
Trigger: TTCACAATCGCCAAGACATCAACCTAAGTGTCCATC...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACCTGGTCAAGAACTTCTaGCCTCAAATGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYLVKNF*PQMIHL
Trigger: CAGGTGGATCATTTGAGGTCAGAAGTTCTTGACCAG...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTCTGGTCAAGAACTTCTaGCCTCAAATGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLALVKNF*PQMIHL
Trigger: CAGGTGGATCATTTGAGGTCAGAAGTTCTTGACCAG...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACTTGTGTGTCTGTGTGTaGGCTGTCTGGTCATATCCT +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYLCVCV*AVWSYP
Trigger: AGGATATGACCAGACAGCTCACACACAGACACACAA...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCAAGAAAAGGTTGTTTTaGCAATGGACACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSKKRLF*QWTPFH
Trigger: ATGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTT...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGGGCTGGGGTTCATGTTaGTTATTACTTTCAAACTAT +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMGWGSC*LLLSNY
Trigger: ATAGTTTGAAAGTAATAAGCAACATGAACCCCAGCC...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTGGGTTGATGAAACTGTaGCCAGAGGTTCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLAGLMKL*PEVHRN
Trigger: GTTCCTATGAACCTCTGGGCACAGTTTCATCAACCC...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTACCCTCACCAACGCTTaGATTTTGAGTCTACTGAAC +
Preference number: 4 (lower is better)
Translates to: VNNASVNVEVSLQHTDFITLTNA*ILSLLN
Trigger: GTTCAGTAGACTCAAAATGCAAGCGTTGGTGAGGGT...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTGAAATCTCCACTTCCTaGGTTCAAGCCATTCTCACT +
Preference number: 4 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIEISTS*VQAILT
Trigger: AGTGAGAATGGCTTGAACCCAGGAAGTGGAGATTTC...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACGAGGAAATGGATGTCTaGAGTTACACAGGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYEEMDV*SYTGKY
Trigger: GTACTTGCCTGTGTAACTTCAGACATCCATTTCCTC...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTGAGGAAATGGATGTCTaGAGTTACACAGGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLAEEMDV*SYTGKY
Trigger: GTACTTGCCTGTGTAACTTCAGACATCCATTTCCTC...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACTTGAACTTCTGGTCTTaGTTAACCCATCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYLNFWS*LTHLSL
Trigger: CAGGCTGAGATGGGTTAATCAAGACCAGAAGTTCAA...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR TCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACGATGGACACTTAGGTTaGTGTCTTGGCGATTGTGAA +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYDGHLG*CLGDCE
Trigger: TTCACAATCGCCAAGACATCAACCTAAGTGTCCATC...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTCCAAGTGTTCCTAAGTaGAAGAAGACTGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLAPSVPK*KKTVMC
Trigger: GCACATCACAGTCTTCTTGCACTTAGGAACACTTGG...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGGGACCAGTACCATATTaGTTTAATTACACAGTTCTA +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMGPVPY*FNYTVL
Trigger: TAGAACTGTGTAATTAAAGCAATATGGTACTGGTCC...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACAGTATCAGTACTTGCTaGGCTTTTGCAGCCATTTGC +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYSISTC*AFAAIC
Trigger: GCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACT...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGACTGGTAATAGTCATTTaGGTTGATTACCATCTTTAC +
Preference number: 4 (lower is better)
Translates to: FISNSSISTCWAFAAICGLVIVI*VDYHLY
Trigger: GTAAAGATGGTAATCAACCCAAATGACTATTACCAG...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATCTGGTAATAGTCATTTaGGTTGATTACCATCTTTAC +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINLVIVI*VDYHLY
Trigger: GTAAAGATGGTAATCAACCCAAATGACTATTACCAG...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGGTGATAGTAGTTTCTTaGCTGTACCTTCACAAATAT +
Preference number: 4 (lower is better)
Translates to: LILPPRTKVAKSSILLLMVIVVS*LYLHKY
Trigger: ATATTTGTGAAGGTACAGCCAAGAAACTACTATCAC...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTGATAGTAGTTTCTTaGCTGTACCTTCACAAATAT +
Preference number: 4 (lower is better)
Translates to: LNSASPNQSGKELHLTINVIVVS*LYLHKY
Trigger: ATATTTGTGAAGGTACAGCCAAGAAACTACTATCAC...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR TCA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTCTACTCCTGTTTAACTaGAACTTTGTACCCTTGACC +
Preference number: 4 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLALLLFN*NFVPLT
Trigger: GGTCAAGGGTACAAAGTTTCAGTTAAACAGGAGTAG...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACCAGACTTATTTTACTTaGCATCCTCTTCTCACCACC +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYQTYFT*HPLLTT
Trigger: GGTGGTGAGAAGAGGATGGCAAGTAAAATAAGTCTG...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTATATATAATGAGGAGTaGAATTCCTGGGTTAAGGGC +
Preference number: 4 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIIYNEE*NSWVKG
Trigger: GCCCTTAACCCAGGAATTCCACTCCTCATTATATAT...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR CAA 72 bp CAGCCAACCGCATGTCTAAACAAGTTTCACTTGTTTTaGAACTTCTGGAGTATCATAATGTACATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QPTACLNKFHLF*NFWSIIMYMSS
Trigger: AGAAGACATGTACATTATGATACTCCAGAAGTTCAAAAACAAGTGAAACTTGTTTAGACATGCGGTTGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
3UTR CAA 72 bp TTCCCTTTTCTCCATACCCTCACCAACGCTTGCATTTaGAGTCTACTGAACTATTTGGTTTTATGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FPFLHTLTNACI*SLLNYLVLCSF
Trigger: AAAAGAACATAAAACCAAATAGTTCAGTAGACTCAAAATGCAAGCGTTGGTGAGGGTATGGAGAAAAGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACGTTGGTAATTTCTTCTaGAATTTGTGCGCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYVGNFF*NLCALL
Trigger: AAGCAGAGCGCACAAATTCCAGAAGAAATTACCAAC...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR CCA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTGAGCTTTTTGCTGATTaGTTACTGGTGATACTTCTC +
Preference number: 4 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLAELFAD*LLVILL
Trigger: GAGAAGTATCACCAGTAACCAATCAGCAAAAAGCTC...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR CCA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTAGGTTGTTTTGCCAATaGACACCTTTCCATATTGAA +
Preference number: 4 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIRLFCQ*TPFHIE
Trigger: TTCAATATGGAAAGGTGTCCATTGGCAAAACAACCT...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR GCA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTGGCTGGGGTTCATGTTaGTTATTACTTTCAAACTAT +
Preference number: 4 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLAGWGSC*LLLSNY
Trigger: ATAGTTTGAAAGTAATAAGCAACATGAACCCCAGCC...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACGGCTGGGGTTCATGTTaGTTATTACTTTCAAACTAT +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYGWGSC*LLLSNY
Trigger: ATAGTTTGAAAGTAATAAGCAACATGAACCCCAGCC...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR GCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACCCTGGGTTAAGGGCATaGATATTTGTAATTTTGACA +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYPGLRA*IFVILT
Trigger: TGTCAAAATTACAAATATGCATGCCCTTAACCCAGG...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
3UTR CAA 72 bp AAATCCTCTGATGCTCAAGTCCCTAATATGAAGTATTaGGATATAACCTGTGCATACCTTCTCATATACTTT +
Preference number: 4 (lower is better)
Translates to: KSSDAQVPNMKY*DITCAYLLIYF
Trigger: AAAGTATATGAGAAGGTATGCACAGGTTATATCCAAATACTTCATATTAGGGACTTGAGCATCAGAGGATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CCA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACCTGGTAATAGTCATTTaGGTTGATTACCATCTTTAC +
Preference number: 4 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYLVIVI*VDYHLY
Trigger: GTAAAGATGGTAATCAACCCAAATGACTATTACCAG...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp ACAATGGAATCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCCCGCCGGGACTGGGGTaGGCGTGGCCGGAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: TMESWEKEGSLQPRITHLPPGLG*AWPEEH
Trigger: GTGCTCCTCCGGCCACGCCAACCCCAGTCCCGGCGG...GAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGATTCCATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS CCA 90 bp GTCCCGCCGTTGGTAATTTCTTCTGGAATTTGTGCGCTCTGCTTTTaGCCCGAGGAGCACTCAGGAAACCCTGGGCTAAGTAGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: VPPLVISSGICALCF*PEEHSGNPGLSSSG
Trigger: CCCGGAACTACTTAGCCCAGGGTTTCCTGAGTGCTCCTCGGGCCAAAAGCAGAGCGCACAAATTCCAGAAGAAATTACCAACGGCGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR CAA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTCGGGGTTTCATCATGTaGGCCAGGCTGGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: TSARVGGITGALQDAWLIRGFIM*ARLVKN
Trigger: GTTCTTGACCAGCCTGGCCAACATGATGAAACCCCG...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS GCA 90 bp AACAGCTGCCTTCCCTTTGACCATGGTCTTTCCAACTACCACAGCTaGTTCCTCAGCATGCCACCAGGGCCTTTCCCAACATCCCCCATA +
Preference number: 5 (lower is better)
Translates to: NSCLPFDHGLSNYHS*FLSMPPGPFPTSPI
Trigger: TATGGGGGATGTTGGGAAAGGCCCTGGTGGCATGCTGAGGAAGCAGCTGTGGTAGTTGGAAAGACCATGGTCAAAGGGAAGGCAGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS-3UTR CAA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCTTGTGCGCTCTGCTTTaGGCCCGAGGAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: VTQASTLAYKASGKCHLVLCALL*ARGALR
Trigger: CCTGAGTGCTCCTCGGGCCAAAAGCAGAGCGCACAA...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR CAA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGTCACTCTTCTCACTCTaGTCGCTCAGGCTGGACTGC +
Preference number: 5 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLSLFSL*SLRLDC
Trigger: GCAGTCCAGCCTGAGCGACAAGAGTGAGAAGAGTGA...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCTCACTCTTCTCACTCTaGTCGCTCAGGCTGGACTGC +
Preference number: 5 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFSLFSL*SLRLDC
Trigger: GCAGTCCAGCCTGAGCGACAAGAGTGAGAAGAGTGA...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp CTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCCTGCAGAGGGACAGCTaGGATTCCCACTCACTTCAT +
Preference number: 5 (lower is better)
Translates to: LPPNLDFSGAIGEALSLSLQRDS*DSHSLH
Trigger: ATGAAGTGAGTGGGAATCCAAGCTGTCCCTCTGCAG...GGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640290.2
CDS CCA 90 bp ACCATCATGCTGTGGAAGGTTAAGAATGGAGTGAGGGTCCGGGTATaGGATGGAGGACCGGCACTTAATGCTGTTGCTGGGAACGTGGAA +
Preference number: 5 (lower is better)
Translates to: TIMLWKVKNGVRVRV*DGGPALNAVAGNVE
Trigger: TTCCACGTTCCCAGCAACAGCATTAAGTGCCGGTCCTCCATCCCATACCCGGACCCTCACTCCATTCTTAACCTTCCACAGCATGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS-3UTR CAA 90 bp ACTTCAGCCCGAGTAGGTGGGATTACAGGCGCCCTCCAAGATGCCTGGCTAATTAGTATCCGTGGAGGATaGGTTCCAGAACCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: TSARVGGITGALQDAWLISIRGG*VPEPSL
Trigger: CAAGGAAGGTTCTGGAACCAATCCTCCACGGATACT...AATTAGCCAGGCATCTTGGAGGGCGCCTGTAATCCCACCTACTCGGGCTGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTCGGGGTTTTGCCATGTaGGCCACGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: PTDLNSASPNQSGKELHLRGFAM*ATLVLN
Trigger: GTTCAAGACCAGCGTGGCCAACATGGCAAAACCCCG...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp CTTCCTCCCAACCTGGACTTCAGTGGGGCTATAGGTGAAGCCCTGTCTCTATCCATGGGAAGAAGCTCCTaGGCTACAGGAGCTCTAGTT +
Preference number: 5 (lower is better)
Translates to: LPPNLDFSGAIGEALSLSMGRSS*ATGALV
Trigger: AACTAGAGCTCCTGTAGCCAAGGAGCTTCTTCCCAT...GGATAGAGACAGGGCTTCACCTATAGCCCCACTGAAGTCCAGGTTGGGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640290.2
CDS-3UTR CAA 90 bp TGGAAAGGGAGCAAAAAGGCTGGCTTTGGCCAGCTCTATGGTAGACACTGGGTAGCAAAAAGGCTGGCTTaGGCCAGCTCTATGGTAGAC +
Preference number: 5 (lower is better)
Translates to: WKGSKKAGFGQLYGRHWVAKRLA*ASSMVD
Trigger: GTCTACCATAGAGCTGGCCAAAGCCAGCCTTTTTGC...TACCCAGTGTCTACCATAGAGCTGGCCAAAGCCAGCCTTTTTGCTCCCTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CAA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCAGGATCCAGGCCTTTTaGATTCCCCATTGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFRIQAF*IPHCLH
Trigger: GTGAAGGCAATGGGGAATCAAAAAGGCCTGGATCCT...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGCGGGGTTTTGCCATGTaGGCCACGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: KWMSEVTQASTLAYKASGRGFAM*ATLVLN
Trigger: GTTCAAGACCAGCGTGGCCAACATGGCAAAACCCCG...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS TCA 90 bp CACAGTTACAGAACACCATCATGCTGTGGAAGGTTAAGAATGGAGTaGGGGTCCGGGTATGGGATGGAGGACCGGCACTTAATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: HSYRTPSCCGRLRME*GSGYGMEDRHLMLL
Trigger: CAACAGCATTAAGTGCCGGTCCTCCATCCCATACCCGGACCCTCACTCCATTCTTAACCTTCCACAGCATGATGGTGTTCTGTAACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS GCA 90 bp GAAATAGTCCCGCCGTTGGTAATTTCTTCTGGAATTTGTGCGCTCTaGTTTTGGCCCGAGGAGCACTCAGGAAACCCTGGGCTAAGTAGT +
Preference number: 5 (lower is better)
Translates to: EIVPPLVISSGICAL*FWPEEHSGNPGLSS
Trigger: ACTACTTAGCCCAGGGTTTCCTGAGTGCTCCTCGGGCCAAAAGCAGAGCGCACAAATTCCAGAAGAAATTACCAACGGCGGGACTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS CCA 90 bp TTGAGAGAGAGGAACAGGCTTCCTAAGGACACAGCAAGTTACACATaGAAGGAATTAACCTTGCTTGGGGTGGGGGAGGGATGGCATCTG +
Preference number: 5 (lower is better)
Translates to: LRERNRLPKDTASYT*KELTLLGVGEGWHL
Trigger: CAGATGCCATCCCTCCCCCACCCCAAGCAAGGTTAATTCCTTCCATGTGTAACTTGCTGTGTCCTTAGGAAGCCTGTTCCTCTCTCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS CCA 90 bp CTTCCTCAGCATGCCACCAGGGCCTTTCCCAACATCCCCCATAACTaGCATTTTAACCACCTGCAAGCTCAACGTGTTCACTGTAATGTC +
Preference number: 5 (lower is better)
Translates to: LPQHATRAFPNIPHN*HFNHLQAQRVHCNV
Trigger: GACATTACAGTGAACACGTTGAGCTTGCAGGTGGTTAAAATGCCAGTTATGGGGGATGTTGGGAAAGGCCCTGGTGGCATGCTGAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS-3UTR CAA 90 bp TGGAAAGGGAGCAAAAAGGCTGGCTTTGGCCAGCTCTATGGTAGACACTGGGTAGGAAGGGCACTCACATaGATGTTGCTGTTGAGCATG +
Preference number: 5 (lower is better)
Translates to: WKGSKKAGFGQLYGRHWVGRALT*MLLLSM
Trigger: CATGCTCAACAGCAACATCAATGTGAGTGCCCTTCC...TACCCAGTGTCTACCATAGAGCTGGCCAAAGCCAGCCTTTTTGCTCCCTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CAA 90 bp TCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCTTCCTTCCTGCAAAAAGGCTGGCTTaGGCCAGCTCTATGGTAGAC +
Preference number: 5 (lower is better)
Translates to: SWEKEGSLQPRITHLFLPAKRLA*ASSMVD
Trigger: GTCTACCATAGAGCTGGCCAAAGCCAGCCTTTTTGC...AGGAAGGAAGAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CAA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCTCGAAGAGAAACACTTaGTGCAGCTGCCGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLSKRNT*CSCRQV
Trigger: CACCTGGCGGCAGCTGCACAAAGTGTTTCTCTTCGA...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR CAA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTGTACTTGCTGGGCTTTaGCAGCCATTTGCGGACATG +
Preference number: 5 (lower is better)
Translates to: PTDLNSASPNQSGKELHLVLAGL*QPFADM
Trigger: CATGTCCGCAAATGGCTGCAAAAGCCCAGCAAGTAC...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCGGGGTTTCATCATGTaGGCCAGGCTGGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: GLYQLICLPAICACVTFPRGFIM*ARLVKN
Trigger: GTTCTTGACCAGCCTGGCCAACATGATGAAACCCCG...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS CCA 90 bp TGGTGGACTCCTGTCTATATGTGGCGTCAATATCAAACACAACAGTaGCATGGGTGTCTTCAGGGTACCGGACACTTCTACGGTAGGACA +
Preference number: 5 (lower is better)
Translates to: WWTPVYMWRQYQTQQ*HGCLQGTGHFYGRT
Trigger: TGTCCTACCGTAGAAGTGTCCGGTACCCTGAAGACACCCATGCCACTGTTGTGTTTGATATTGACGCCACATATAGACAGGAGTCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532882.2
ENST00000677795.1
CDS-3UTR CAA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTAGGATCCAGGCCTTTTaGATTCCCCATTGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: PTDLNSASPNQSGKELHLRIQAF*IPHCLH
Trigger: GTGAAGGCAATGGGGAATCAAAAAGGCCTGGATCCT...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTAGTATCCGTGGAGGATaGGTTCCAGAACCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: PTDLNSASPNQSGKELHLSIRGG*VPEPSL
Trigger: CAAGGAAGGTTCTGGAACCAATCCTCCACGGATACT...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS GCA 90 bp ACAGAACCAGCACAAAATCAACAGCCTGACAGATGCACTAACAGCTaGCTTCCCTTTGACCATGGTCTTTCCAACTACCACAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: TEPAQNQQPDRCTNS*LPFDHGLSNYHSCF
Trigger: GAAGCAGCTGTGGTAGTTGGAAAGACCATGGTCAAAGGGAAGGCAGCTGTTAGTGCATCTGTCAGGCTGTTGATTTTGTGCTGGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS-3UTR CAA 90 bp ACAATGGAATCATGGGAGAAGGAAGGAAGTCTCCAACCACGCATAACACACCTCGGAAGGGCACTCACATaGATGTTGCTGTTGAGCATG +
Preference number: 5 (lower is better)
Translates to: TMESWEKEGSLQPRITHLGRALT*MLLLSM
Trigger: CATGCTCAACAGCAACATCAATGTGAGTGCCCTTCC...GAGGTGTGTTATGCGTGGTTGGAGACTTCCTTCCTTCTCCCATGATTCCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531572.2
ENST00000640290.2
CDS-3UTR CAA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTAGTATCCGTGGAGGATaGGTTCCAGAACCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSSIRGG*VPEPSL
Trigger: CAAGGAAGGTTCTGGAACCAATCCTCCACGGATACT...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGACGGGGTTTTGCCATGTaGGCCACGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: FISNSSISTCWAFAAICGRGFAM*ATLVLN
Trigger: GTTCAAGACCAGCGTGGCCAACATGGCAAAACCCCG...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATCGGGGTTTTGCCATGTaGGCCACGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LNSASPNQSGKELHLTINRGFAM*ATLVLN
Trigger: GTTCAAGACCAGCGTGGCCAACATGGCAAAACCCCG...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGTACCCAGTAGTGGGATaGCTGGATCATATGTGTTTT +
Preference number: 5 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLYPVVG*LDHMCF
Trigger: AAAACACATATGATCCAGCAATCCCACTACTGGGTA...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS TCA 90 bp AAGGAGAGAAAATGTGTGTCTGTATGCATTGGGGTGGTCCAGGCCTaGTGTGAATGGCAACTAACAGCTGTACCTAATGTGTGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: KERKCVSVCIGVVQA*CEWQLTAVPNVCQH
Trigger: ATGCTGGCACACATTAGGTACAGCTGTTAGTTGCCATTCACATCAGGCCTGGACCACCCCAATGCATACAGACACACATTTTCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS GCA 90 bp TCAGTGTCAGACACAGAACCAGCACAAAATCAACAGCCTGACAGATaGACTAACAGCTGCCTTCCCTTTGACCATGGTCTTTCCAACTAC +
Preference number: 5 (lower is better)
Translates to: SVSDTEPAQNQQPDR*TNSCLPFDHGLSNY
Trigger: GTAGTTGGAAAGACCATGGTCAAAGGGAAGGCAGCTGTTAGTGCATCTGTCAGGCTGTTGATTTTGTGCTGGTTCTGTGTCTGACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS-3UTR CAA 90 bp GCCTGCTCTCCATGTTCCCAGCTGAGGTGGAACAAGGCCTTCTTGTTTCAGTTCGAAGATAATGCAGACTaGTTTTCCAAAGAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: ACSPCSQLRWNKAFLFQFEDNAD*FSKEAV
Trigger: AACAGCCTCTTTGGAAAACAAGTCTGCATTATCTTC...GAACTGAAACAAGAAGGCCTTGTTCCACCTCAGCTGGGAACATGGAGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR CAA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGACGGGGTTTCATCATGTaGGCCAGGCTGGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: FISNSSISTCWAFAAICGRGFIM*ARLVKN
Trigger: GTTCTTGACCAGCCTGGCCAACATGATGAAACCCCG...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTTCACTCTTCTCACTCTaGTCGCTCAGGCTGGACTGC +
Preference number: 5 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFSLFSL*SLRLDC
Trigger: GCAGTCCAGCCTGAGCGACAAGAGTGAGAAGAGTGA...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS TCA 90 bp GTAAACAGATGGCCTTGGGAGAGGGTTTCCATGTCTATTCTGGGCTaGGAAAGCAGATACAGCAGGAATATGGCTCTCAAGGTTCTGATA +
Preference number: 5 (lower is better)
Translates to: VNRWPWERVSMSILG*ESRYSRNMALKVLI
Trigger: TATCAGAACCTTGAGAGCCATATTCCTGCTGTATCTGCTTTCTCAGCCCAGAATAGACATGGAAACCCTCTCCCAAGGCCATCTGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS GCA 90 bp AGGCAGTTAATTATAACCACTGAGCCCTACCATTTCATCAGCACATaGCTCAGTGATCCCAGGATAGAGAACTATGTCCTCCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: RQLIITTEPYHFIST*LSDPRIENYVLPLC
Trigger: ACAAAGGGGGAGGACATAGTTCTCTATCCTGGGATCACTGAGGCATGTGCTGATGAAATGGTAGGGCTCAGTGGTTATAATTAACTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677795.1
CDS CCA 90 bp ACGTCAGGAGCTTCATCTGTACCTCCCTTTAGCCATCTGGTCCCATaGTCAGTCTTAACCTTATCATCATCCAGAAATCTATCTGCGAAC +
Preference number: 5 (lower is better)
Translates to: TSGASSVPPFSHLVP*SVLTLSSSRNLSAN
Trigger: GTTCGCAGATAGATTTCTGGATGATGATAAGGTTAAGACTGACCATGGGACCAGATGGCTAAAGGGAGGTACAGATGAAGCTCCTGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532882.2
ENST00000677179.1
ENST00000677795.1
CDS-3UTR CAA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCATCCTCAAGAAAAGGTaGTTTTGCCAATGGACACCT +
Preference number: 5 (lower is better)
Translates to: VTQASTLAYKASGKCHLVILKKR*FCQWTP
Trigger: AGGTGTCCATTGGCAAAACAACCTTTTCTTGAGGAT...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCAACCCTGTATTTCCCTaGGGAATAATGGTTCAGTAC +
Preference number: 5 (lower is better)
Translates to: NPQILILPPRTKVAKSSINPVFP*GIMVQY
Trigger: GTACTGAACCATTATTCCCAAGGGAAATACAGGGTT...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCAACCCTGTATTTCCCTaGGGAATAATGGTTCAGTAC +
Preference number: 5 (lower is better)
Translates to: VTQASTLAYKASGKCHLVNPVFP*GIMVQY
Trigger: GTACTGAACCATTATTCCCAAGGGAAATACAGGGTT...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGTTATGTACTGATGGGTaGATGAAACTGTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: KWMSEVTQASTLAYKASGLCTDG*MKLCPE
Trigger: CTCTGGGCACAGTTTCATCAACCCATCAGTACATAA...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AAGACACACAGTGGCGAGGCGGAACTCCAGGATACCAGAGGAAATGGATGTCTGTTAGTGCCATGTCTTTaGCATTTTTGTGGATTTTGC +
Preference number: 5 (lower is better)
Translates to: KTHSGEAELQDTRGNGCLLVPCL*HFCGFC
Trigger: GCAAAATCCACAAAAATGCAAAAGACATGGCACTAA...CAGACATCCATTTCCTCTGGTATCCTGGAGTTCCGCCTCGCCACTGTGTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGGTACTTGCTGGGCTTTaGCAGCCATTTGCGGACATG +
Preference number: 5 (lower is better)
Translates to: LILPPRTKVAKSSILLLMVLAGL*QPFADM
Trigger: CATGTCCGCAAATGGCTGCAAAAGCCCAGCAAGTAC...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCACAGACTTATTTTACTaGCCATCCTCTTCTCACCAC +
Preference number: 5 (lower is better)
Translates to: NPQILILPPRTKVAKSSITDLFY*PSSSHH
Trigger: GTGGTGAGAAGAGGATGGCAAGTAAAATAAGTCTGT...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS TCA 90 bp TGCATCGATGGGACCAGAATTCTCCAGGGAACTGAAACTGTGGTGTaGTCGCCAACTTCTCCCTCTAATCATCACCAAATAGGGTTTATT +
Preference number: 5 (lower is better)
Translates to: CIDGTRILQGTETVV*SPTSPSNHHQIGFI
Trigger: AATAAACCCTATTTGGTGATGATTAGAGGGAGAAGTTGGCGATCACACCACAGTTTCAGTTCCCTGGAGAATTCTGGTCCCATCGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532882.2
ENST00000677179.1
ENST00000677795.1
CDS-3UTR CAA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTGAAATAGTCCCGCCGTaGGTAATTTCTTCTGGAATT +
Preference number: 5 (lower is better)
Translates to: GLYQLICLPAICACVTFPEIVPP*VISSGI
Trigger: AATTCCAGAAGAAATTACCAACGGCGGGACTATTTC...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS-3UTR CAA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGCAAGAAAAGGTTGTTTaGCCAATGGACACCTTTCCA +
Preference number: 5 (lower is better)
Translates to: KWMSEVTQASTLAYKASGQEKVV*PMDTFP
Trigger: TGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTTG...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCAAGAAAAGGTTGTTTaGCCAATGGACACCTTTCCA +
Preference number: 5 (lower is better)
Translates to: GLYQLICLPAICACVTFPQEKVV*PMDTFP
Trigger: TGGAAAGGTGTCCATTGGCAAAACAACCTTTTCTTG...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGATCCTCAAGAAAAGGTaGTTTTGCCAATGGACACCT +
Preference number: 5 (lower is better)
Translates to: KWMSEVTQASTLAYKASGILKKR*FCQWTP
Trigger: AGGTGTCCATTGGCAAAACAACCTTTTCTTGAGGAT...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCAGGATCCAGGCCTTTTaGATTCCCCATTGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSRIQAF*IPHCLH
Trigger: GTGAAGGCAATGGGGAATCAAAAAGGCCTGGATCCT...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCAGTATCCGTGGAGGATaGGTTCCAGAACCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSSIRGG*VPEPSL
Trigger: CAAGGAAGGTTCTGGAACCAATCCTCCACGGATACT...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTACAGACTTATTTTACTaGCCATCCTCTTCTCACCAC +
Preference number: 5 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSTDLFY*PSSSHH
Trigger: GTGGTGAGAAGAGGATGGCAAGTAAAATAAGTCTGT...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTCGGGGTTTTGCCATGTaGGCCACGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIRGFAM*ATLVLN
Trigger: GTTCAAGACCAGCGTGGCCAACATGGCAAAACCCCG...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AACCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCACCAACGCTTGCATTTaGAGTCTACTGAACTATTTG +
Preference number: 5 (lower is better)
Translates to: NPQILILPPRTKVAKSSITNACI*SLLNYL
Trigger: CAAATAGTTCAGTAGACTCAAAATGCAAGCGTTGGT...GATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAATGGGAAGAAGCTCCTaGGCTACAGGAGCTCTAGTT +
Preference number: 5 (lower is better)
Translates to: FISNSSISTCWAFAAICGMGRSS*ATGALV
Trigger: AACTAGAGCTCCTGTAGCCAAGGAGCTTCTTCCCAT...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678132.1
CDS CCA 90 bp TCCTTTTACCTGGTATGCTCATCACCGGTTTTGATCTCATGTGAATaGTATGTGGCCTCTGGTGCTGATCATTTCCCACCTTTAACAGTT +
Preference number: 5 (lower is better)
Translates to: SFYLVCSSPVLISCE*YVASGADHFPPLTV
Trigger: AACTGTTAAAGGTGGGAAATGATCAGCACCAGAGGCCACATACCATTCACATGAGATCAAAACCGGTGATGAGCATACCAGGTAAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528653.2
ENST00000528763.2
ENST00000677795.1
CDS-3UTR CAA 90 bp CCCACAGATCTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTCCTGTCATTATCATTTaGCCGATAAGATCTGTTTAC +
Preference number: 5 (lower is better)
Translates to: PTDLNSASPNQSGKELHLPVIII*PIRSVY
Trigger: GTAAACAGATCTTATCGGCAAAATGATAATGACAGG...AAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAGATCTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTCACCAACGCTTGCATTTaGAGTCTACTGAACTATTTG +
Preference number: 5 (lower is better)
Translates to: GCTNLYVYQQSVPVSRFLTNACI*SLLNYL
Trigger: CAAATAGTTCAGTAGACTCAAAATGCAAGCGTTGGT...GAGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGACCAACGCTTGCATTTaGAGTCTACTGAACTATTTG +
Preference number: 5 (lower is better)
Translates to: KWMSEVTQASTLAYKASGTNACI*SLLNYL
Trigger: CAAATAGTTCAGTAGACTCAAAATGCAAGCGTTGGT...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTTCACTCTTCTCACTCTaGTCGCTCAGGCTGGACTGC +
Preference number: 5 (lower is better)
Translates to: VNNASVNVEVSLQHTDFISLFSL*SLRLDC
Trigger: GCAGTCCAGCCTGAGCGACAAGAGTGAGAAGAGTGA...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGAAATGCCATCTAGTCAGTAGGAATCCAACATaGTTTCCAAATTACCACTCA +
Preference number: 5 (lower is better)
Translates to: VTQASTLAYKASGKCHLVSRNPT*FPNYHS
Trigger: TGAGTGGTAATTTGGAAACAATGTTGGATTCCTACT...GACTAGATGGCATTTCCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS GCA 90 bp GCATTGAGCCACTGCTCACAGTCAGTAATACACTTGCAATACTCTTaGCTCCAAAAGGAAGAGTATAAGATCCAGTCCAGTAGCAAAAGA +
Preference number: 5 (lower is better)
Translates to: ALSHCSQSVIHLQYS*LQKEEYKIQSSSKR
Trigger: TCTTTTGCTACTGGACTGGATCTTATACTCTTCCTTTTGGAGGCAAGAGTATTGCAAGTGTATTACTGACTGTGAGCAGTGGCTCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532882.2
ENST00000677795.1
CDS-3UTR CAA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTTTAGTGCCATGTCTTTaGCATTTTTGTGGATTTTGC +
Preference number: 5 (lower is better)
Translates to: GLYQLICLPAICACVTFPLVPCL*HFCGFC
Trigger: GCAAAATCCACAAAAATGCAAAAGACATGGCACTAA...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AAATGGATGTCTGAAGTTACACAGGCAAGTACTCTAGCCTACAAGGCCTCTGGGTTAGTGCCATGTCTTTaGCATTTTTGTGGATTTTGC +
Preference number: 5 (lower is better)
Translates to: KWMSEVTQASTLAYKASGLVPCL*HFCGFC
Trigger: GCAAAATCCACAAAAATGCAAAAGACATGGCACTAA...CCCAGAGGCCTTGTAGGCTAGAGTACTTGCCTGTGTAACTTCAGACATCCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp TTTATCCCCTCCCTCCAGTCCATGAAACCACCTTTCTACACTCTGCTTGTGAGTAGTGATAGTAGTTTCTaGGCTGTACCTTCACAAATA +
Preference number: 5 (lower is better)
Translates to: FIPSLQSMKPPFYTLLVSSDSSF*AVPSQI
Trigger: TATTTGTGAAGGTACAGCCAAGAAACTACTATCACT...ACTCACAAGCAGAGTGTAGAAAGGTGGTTTCATGGACTGGAGGGAGGGGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GGGCTGTACCAACTTATATGTCTACCAGCAATCTGTGCCTGTGTCACGTTTCCTAGTGATAGTAGTTTCTaGGCTGTACCTTCACAAATA +
Preference number: 5 (lower is better)
Translates to: GLYQLICLPAICACVTFPSDSSF*AVPSQI
Trigger: TATTTGTGAAGGTACAGCCAAGAAACTACTATCACT...AGGAAACGTGACACAGGCACAGATTGCTGGTAGACATATAAGTTGGTACAGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS GCA 90 bp TATTTAATACTTCTTAGGGCTCTGCCCTCTGCTAGCTTCATTTCCTaGTCTACCTCCTGTCACCTACATTCCTGTAATACTGAATGTTTC +
Preference number: 5 (lower is better)
Translates to: YLILLRALPSASFIS*STSCHLHSCNTECF
Trigger: GAAACATTCAGTATTACAGGAATGTAGGTGACAGGAGGTAGAGCAGGAAATGAAGCTAGCAGAGGGCAGAGCCCTAAGAAGTATTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS-3UTR CAA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGAATCCTCAAGAAAAGGTaGTTTTGCCAATGGACACCT +
Preference number: 5 (lower is better)
Translates to: FISNSSISTCWAFAAICGILKKR*FCQWTP
Trigger: AGGTGTCCATTGGCAAAACAACCTTTTCTTGAGGAT...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATAACCCTGTATTTCCCTaGGGAATAATGGTTCAGTAC +
Preference number: 5 (lower is better)
Translates to: LNSASPNQSGKELHLTINNPVFP*GIMVQY
Trigger: GTACTGAACCATTATTCCCAAGGGAAATACAGGGTT...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTGTACTTGCTGGGCTTTaGCAGCCATTTGCGGACATG +
Preference number: 5 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLAVLAGL*QPFADM
Trigger: CATGTCCGCAAATGGCTGCAAAAGCCCAGCAAGTAC...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACGTACTTGCTGGGCTTTaGCAGCCATTTGCGGACATG +
Preference number: 5 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYVLAGL*QPFADM
Trigger: CATGTCCGCAAATGGCTGCAAAAGCCCAGCAAGTAC...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCACAGACTTATTTTACTaGCCATCCTCTTCTCACCAC +
Preference number: 5 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSTDLFY*PSSSHH
Trigger: GTGGTGAGAAGAGGATGGCAAGTAAAATAAGTCTGT...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATACAGACTTATTTTACTaGCCATCCTCTTCTCACCAC +
Preference number: 5 (lower is better)
Translates to: LNSASPNQSGKELHLTINTDLFY*PSSSHH
Trigger: GTGGTGAGAAGAGGATGGCAAGTAAAATAAGTCTGT...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATTACCCAGTAGTGGGATaGCTGGATCATATGTGTTTT +
Preference number: 5 (lower is better)
Translates to: LNSASPNQSGKELHLTINYPVVG*LDHMCF
Trigger: AAAACACATATGATCCAGCAATCCCACTACTGGGTA...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTACCCAGTAGTGGGATaGCTGGATCATATGTGTTTT +
Preference number: 5 (lower is better)
Translates to: LILPPRTKVAKSSILLLMYPVVG*LDHMCF
Trigger: AAAACACATATGATCCAGCAATCCCACTACTGGGTA...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTCTGCAGAGGGACAGCTaGGATTCCCACTCACTTCAT +
Preference number: 5 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLALQRDS*DSHSLH
Trigger: ATGAAGTGAGTGGGAATCCAAGCTGTCCCTCTGCAG...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678132.1
CDS CCA 90 bp TTAGAAAACTTTGTCAATACCTGGAAAACGATGACATTTAGTCAGTaGATAAGGGAGAAATATGTGGTCACTGGTATAGGGAGTCAAGGG +
Preference number: 5 (lower is better)
Translates to: LENFVNTWKTMTFSQ*IREKYVVTGIGSQG
Trigger: CCCTTGACTCCCTATACCAGTGACCACATATTTCTCCCTTATCCACTGACTAAATGTCATCGTTTTCCAGGTATTGACAAAGTTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS-3UTR CAA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGCCTGTCATTATCATTTaGCCGATAAGATCTGTTTAC +
Preference number: 5 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQPVIII*PIRSVY
Trigger: GTAAACAGATCTTATCGGCAAAATGATAATGACAGG...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATCCTGTCATTATCATTTaGCCGATAAGATCTGTTTAC +
Preference number: 5 (lower is better)
Translates to: LNSASPNQSGKELHLTINPVIII*PIRSVY
Trigger: GTAAACAGATCTTATCGGCAAAATGATAATGACAGG...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTTTATGTACTGATGGGTaGATGAAACTGTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: VNNASVNVEVSLQHTDFILCTDG*MKLCPE
Trigger: CTCTGGGCACAGTTTCATCAACCCATCAGTACATAA...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp TTTATTTCTAACTCCAGTATCAGTACTTGCTGGGCTTTTGCAGCCATTTGCGGATTAGTGCCATGTCTTTaGCATTTTTGTGGATTTTGC +
Preference number: 5 (lower is better)
Translates to: FISNSSISTCWAFAAICGLVPCL*HFCGFC
Trigger: GCAAAATCCACAAAAATGCAAAAGACATGGCACTAA...TCCGCAAATGGCTGCAAAAGCCCAGCAAGTACTGATACTGGAGTTAGAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GCTTATTTCACTAGCATAGTGTCCTCCAGGTCCATCCATGTTGTTGTAAATCAGTTAGTGCCATGTCTTTaGCATTTTTGTGGATTTTGC +
Preference number: 5 (lower is better)
Translates to: AYFTSIVSSRSIHVVVNQLVPCL*HFCGFC
Trigger: GCAAAATCCACAAAAATGCAAAAGACATGGCACTAA...CTGATTTACAACAACATGGATGGACCTGGAGGACACTATGCTAGTGAAATAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp CTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGTATTTTCTGATTTCATTTCCTTaGGATATATACCCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: LPPRTKVAKSSILLLMYFLISFP*DIYPVV
Trigger: CACTACTGGGTATATATCCAAAGGAAATGAAATCAG...AAAATACATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AGGATTGGTTCCAGAACCTTCCTTGGATATAAAAATCCTCTGATGCTCAAGTCCCTGATTTCATTTCCTTaGGATATATACCCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: RIGSRTFLGYKNPLMLKSLISFP*DIYPVV
Trigger: CACTACTGGGTATATATCCAAAGGAAATGAAATCAG...GGACTTGAGCATCAGAGGATTTTTATATCCAAGGAAGGTTCTGGAACCAATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp TTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATGAGTAGGAATCCAACATaGTTTCCAAATTACCACTCA +
Preference number: 5 (lower is better)
Translates to: LILPPRTKVAKSSILLLMSRNPT*FPNYHS
Trigger: TGAGTGGTAATTTGGAAACAATGTTGGATTCCTACT...CATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp CTTAATTCTGCCTCCCCGAACCAAAGTGGCAAAGAGCTCCATCTTACTATTAATAGTGATAGTAGTTTCTaGGCTGTACCTTCACAAATA +
Preference number: 5 (lower is better)
Translates to: LNSASPNQSGKELHLTINSDSSF*AVPSQI
Trigger: TATTTGTGAAGGTACAGCCAAGAAACTACTATCACT...ATTAATAGTAAGATGGAGCTCTTTGCCACTTTGGTTCGGGGAGGCAGAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GTGAACAATGCTTCAGTGAACGTGGAAGTATCTCTTCAACATACTGATTTCATTATCCTCAAGAAAAGGTaGTTTTGCCAATGGACACCT +
Preference number: 5 (lower is better)
Translates to: VNNASVNVEVSLQHTDFIILKKR*FCQWTP
Trigger: AGGTGTCCATTGGCAAAACAACCTTTTCTTGAGGAT...AATGAAATCAGTATGTTGAAGAGATACTTCCACGTTCACTGAAGCATTGTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS CCA 90 bp AAAGTGGATTCACAAAGCTATTTAAAATCTGGCACTAAGATGGAATaGAAACGAATTTCATGGGACCAGCATAGTCTCCAGAAAGGAATT +
Preference number: 5 (lower is better)
Translates to: KVDSQSYLKSGTKME*KRISWDQHSLQKGI
Trigger: AATTCCTTTCTGGAGACTATGCTGGTCCCATGAAATTCGTTTCCATTCCATCTTAGTGCCAGATTTTAAATAGCTTTGTGAATCCACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS-3UTR CAA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTATCCTCAAGAAAAGGTaGTTTTGCCAATGGACACCT +
Preference number: 5 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLAILKKR*FCQWTP
Trigger: AGGTGTCCATTGGCAAAACAACCTTTTCTTGAGGAT...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACAACCCTGTATTTCCCTaGGGAATAATGGTTCAGTAC +
Preference number: 5 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYNPVFP*GIMVQY
Trigger: GTACTGAACCATTATTCCCAAGGGAAATACAGGGTT...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTAACCCTGTATTTCCCTaGGGAATAATGGTTCAGTAC +
Preference number: 5 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLANPVFP*GIMVQY
Trigger: GTACTGAACCATTATTCCCAAGGGAAATACAGGGTT...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678132.1
ENST00000678993.1
CDS-3UTR CAA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTTACCCAGTAGTGGGATaGCTGGATCATATGTGTTTT +
Preference number: 5 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLAYPVVG*LDHMCF
Trigger: AAAACACATATGATCCAGCAATCCCACTACTGGGTA...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS CCA 90 bp AGCTATTTAAAATCTGGCACTAAGATGGAATGGAAACGAATTTCATaGGACCAGCATAGTCTCCAGAAAGGAATTTATTATCAACAATCC +
Preference number: 5 (lower is better)
Translates to: SYLKSGTKMEWKRIS*DQHSLQKGIYYQQS
Trigger: GGATTGTTGATAATAAATTCCTTTCTGGAGACTATGCTGGTCCCATGAAATTCGTTTCCATTCCATCTTAGTGCCAGATTTTAAATAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS-3UTR CAA 90 bp GTGACTACACACTCTACTCTTTTAGTTCAGATTAAGCATCCAATTTTCTTAGCTAGTAGGAATCCAACATaGTTTCCAAATTACCACTCA +
Preference number: 5 (lower is better)
Translates to: VTTHSTLLVQIKHPIFLASRNPT*FPNYHS
Trigger: TGAGTGGTAATTTGGAAACAATGTTGGATTCCTACT...AGCTAAGAAAATTGGATGCTTAATCTGAACTAAAAGAGTAGAGTGTGTAGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS-3UTR CAA 90 bp AAAGAACAGTTTGGTAAAACAGTAACATGCCAAACACATAACCAACTTCTCTACAGTAGGAATCCAACATaGTTTCCAAATTACCACTCA +
Preference number: 5 (lower is better)
Translates to: KEQFGKTVTCQTHNQLLYSRNPT*FPNYHS
Trigger: TGAGTGGTAATTTGGAAACAATGTTGGATTCCTACT...GTAGAGAAGTTGGTTATGTGTTTGGCATGTTACTGTTTTACCAAACTGTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533626.5
ENST00000651655.1
ENST00000677121.1
ENST00000678993.1
CDS GCA 72 bp TTGGGACGGCGTTCGAAGAGAAACACTTTGTGCAGCTaGCGCCAGGTGGAACCAGAAAGCAGCGCGGAGGTC +
Preference number: 6 (lower is better)
Translates to: LGRRSKRNTLCS*RQVEPESSAEV
Trigger: GACCTCCGCGCTGCTTTCTGGTTCCACCTGGCGGCAGCTGCACAAAGTGTTTCTCTTCGAACGCCGTCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS GCA 72 bp CCGCCGTTGGTAATTTCTTCTGGAATTTGTGCGCTCTaGTTTTGGCCCGAGGAGCACTCAGGAAACCCTGGG +
Preference number: 6 (lower is better)
Translates to: PPLVISSGICAL*FWPEEHSGNPG
Trigger: CCCAGGGTTTCCTGAGTGCTCCTCGGGCCAAAAGCAGAGCGCACAAATTCCAGAAGAAATTACCAACGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS CCA 72 bp GTTCGAAGAGAAACACTTTGTGCAGCTGCCGCCAGGTaGAACCAGAAAGCAGCGCGGAGGTCGAAATTCGTG +
Preference number: 6 (lower is better)
Translates to: VRRETLCAAAAR*NQKAARRSKFV
Trigger: CACGAATTTCGACCTCCGCGCTGCTTTCTGGTTCCACCTGGCGGCAGCTGCACAAAGTGTTTCTCTTCGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS CCA 72 bp CTGTGGAAGGTTAAGAATGGAGTGAGGGTCCGGGTATaGGATGGAGGACCGGCACTTAATGCTGTTGCTGGG +
Preference number: 6 (lower is better)
Translates to: LWKVKNGVRVRV*DGGPALNAVAG
Trigger: CCCAGCAACAGCATTAAGTGCCGGTCCTCCATCCCATACCCGGACCCTCACTCCATTCTTAACCTTCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS TCA 72 bp AGAACACCATCATGCTGTGGAAGGTTAAGAATGGAGTaGGGGTCCGGGTATGGGATGGAGGACCGGCACTTA +
Preference number: 6 (lower is better)
Translates to: RTPSCCGRLRME*GSGYGMEDRHL
Trigger: TAAGTGCCGGTCCTCCATCCCATACCCGGACCCTCACTCCATTCTTAACCTTCCACAGCATGATGGTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS CCA 72 bp CATGCCACCAGGGCCTTTCCCAACATCCCCCATAACTaGCATTTTAACCACCTGCAAGCTCAACGTGTTCAC +
Preference number: 6 (lower is better)
Translates to: HATRAFPNIPHN*HFNHLQAQRVH
Trigger: GTGAACACGTTGAGCTTGCAGGTGGTTAAAATGCCAGTTATGGGGGATGTTGGGAAAGGCCCTGGTGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS CAA 90 bp AAACAGAAGAGGCCCAGGAAGTACGTACAAATGGGAAGAAGCTCCTaGGCTACAGGAGCTCTAGTTATGAGTGTGGGAGGGACCGTGAGG +
Preference number: 6 (lower is better)
Translates to: KQKRPRKYVQMGRSS*ATGALVMSVGGTVR
Trigger: CCTCACGGTCCCTCCCACACTCATAACTAGAGCTCCTGTAGCCAAGGAGCTTCTTCCCATTTGTACGTACTTCCTGGGCCTCTTCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000530219.2
ENST00000532882.2
ENST00000677179.1
ENST00000677795.1
CDS CCA 72 bp CACAGCAAGTTACACATGGAAGGAATTAACCTTGCTTaGGGTGGGGGAGGGATGGCATCTGGGCATGGTTTT +
Preference number: 6 (lower is better)
Translates to: HSKLHMEGINLA*GGGGMASGHGF
Trigger: AAAACCATGCCCAGATGCCATCCCTCCCCCACCCCAAGCAAGGTTAATTCCTTCCATGTGTAACTTGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS CCA 72 bp AGGAACAGGCTTCCTAAGGACACAGCAAGTTACACATaGAAGGAATTAACCTTGCTTGGGGTGGGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: RNRLPKDTASYT*KELTLLGVGEG
Trigger: TCCCTCCCCCACCCCAAGCAAGGTTAATTCCTTCCATGTGTAACTTGCTGTGTCCTTAGGAAGCCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS CAA 72 bp GTTGGTAATTTCTTCTGGAATTTGTGCGCTCTGCTTTaGGCCCGAGGAGCACTCAGGAAACCCTGGGCTAAG +
Preference number: 6 (lower is better)
Translates to: VGNFFWNLCALL*ARGALRKPWAK
Trigger: CTTAGCCCAGGGTTTCCTGAGTGCTCCTCGGGCCAAAAGCAGAGCGCACAAATTCCAGAAGAAATTACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS CAA 72 bp AACAGCCTGACAGATGCACTAACAGCTGCCTTCCCTTaGACCATGGTCTTTCCAACTACCACAGCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: NSLTDALTAAFP*TMVFPTTTAAS
Trigger: GGAAGCAGCTGTGGTAGTTGGAAAGACCATGGTCAAAGGGAAGGCAGCTGTTAGTGCATCTGTCAGGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS CAA 72 bp TGCTGCGGAAGGAGAAGCCAAAGTAAACAGATGGCCTaGGGAGAGGGTTTCCATGTCTATTCTGGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: CCGRRSQSKQMA*GEGFHVYSGLR
Trigger: TCTCAGCCCAGAATAGACATGGAAACCCTCTCCCAAGGCCATCTGTTTACTTTGGCTTCTCCTTCCGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS CAA 90 bp CACAAAATCAACAGCCTGACAGATGCACTAACAGCTGCCTTCCCTTaGACCATGGTCTTTCCAACTACCACAGCTGCTTCCTCAGCATGC +
Preference number: 6 (lower is better)
Translates to: HKINSLTDALTAAFP*TMVFPTTTAASSAC
Trigger: GCATGCTGAGGAAGCAGCTGTGGTAGTTGGAAAGACCATGGTCAAAGGGAAGGCAGCTGTTAGTGCATCTGTCAGGCTGTTGATTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS CCA 72 bp TTGGTAATTTCTTCTGGAATTTGTGCGCTCTGCTTTTaGCCCGAGGAGCACTCAGGAAACCCTGGGCTAAGT +
Preference number: 6 (lower is better)
Translates to: LVISSGICALCF*PEEHSGNPGLS
Trigger: ACTTAGCCCAGGGTTTCCTGAGTGCTCCTCGGGCCAAAAGCAGAGCGCACAAATTCCAGAAGAAATTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS CCA 72 bp ACAGATGGCCTTGGGAGAGGGTTTCCATGTCTATTCTaGGCTGAGAAAGCAGATACAGCAGGAATATGGCTC +
Preference number: 6 (lower is better)
Translates to: TDGLGRGFPCLF*AEKADTAGIWL
Trigger: GAGCCATATTCCTGCTGTATCTGCTTTCTCAGCCCAGAATAGACATGGAAACCCTCTCCCAAGGCCATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS CAA 90 bp TTGGTTACTGGTGATACTTCTCGGAGCACTGAAATAGTCCCGCCGTaGGTAATTTCTTCTGGAATTTGTGCGCTCTGCTTTTGGCCCGAG +
Preference number: 6 (lower is better)
Translates to: LVTGDTSRSTEIVPP*VISSGICALCFWPE
Trigger: CTCGGGCCAAAAGCAGAGCGCACAAATTCCAGAAGAAATTACCAACGGCGGGACTATTTCAGTGCTCCGAGAAGTATCACCAGTAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS TCA 72 bp CAATCCGGCAGGAGAGAGAGGAGAGATGCAAGTGCTTaGGAAGATAAGTCACAGCAAAAGGTAGGATGCAGA +
Preference number: 6 (lower is better)
Translates to: QSGRRERRDASA*EDKSQQKVGCR
Trigger: TCTGCATCCTACCTTTTGCTGTGACTTATCTTCTCAAGCACTTGCATCTCTCCTCTCTCTCCTGCCGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS GCA 72 bp GCACAAAATCAACAGCCTGACAGATGCACTAACAGCTaGCTTCCCTTTGACCATGGTCTTTCCAACTACCAC +
Preference number: 6 (lower is better)
Translates to: AQNQQPDRCTNS*LPFDHGLSNYH
Trigger: GTGGTAGTTGGAAAGACCATGGTCAAAGGGAAGGCAGCTGTTAGTGCATCTGTCAGGCTGTTGATTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS GCA 72 bp GACACAGAACCAGCACAAAATCAACAGCCTGACAGATaGACTAACAGCTGCCTTCCCTTTGACCATGGTCTT +
Preference number: 6 (lower is better)
Translates to: DTEPAQNQQPDR*TNSCLPFDHGL
Trigger: AAGACCATGGTCAAAGGGAAGGCAGCTGTTAGTGCATCTGTCAGGCTGTTGATTTTGTGCTGGTTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS GCA 72 bp CTTCTTAGGGCTCTGCCCTCTGCTAGCTTCATTTCCTaGTCTACCTCCTGTCACCTACATTCCTGTAATACT +
Preference number: 6 (lower is better)
Translates to: LLRALPSASFIS*STSCHLHSCNT
Trigger: AGTATTACAGGAATGTAGGTGACAGGAGGTAGAGCAGGAAATGAAGCTAGCAGAGGGCAGAGCCCTAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS CCA 72 bp CTGGTATGCTCATCACCGGTTTTGATCTCATGTGAATaGTATGTGGCCTCTGGTGCTGATCATTTCCCACCT +
Preference number: 6 (lower is better)
Translates to: LVCSSPVLISCE*YVASGADHFPP
Trigger: AGGTGGGAAATGATCAGCACCAGAGGCCACATACCATTCACATGAGATCAAAACCGGTGATGAGCATACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528653.2
ENST00000528763.2
ENST00000677795.1
CDS CCA 72 bp CCTGTCTATATGTGGCGTCAATATCAAACACAACAGTaGCATGGGTGTCTTCAGGGTACCGGACACTTCTAC +
Preference number: 6 (lower is better)
Translates to: PVYMWRQYQTQQ*HGCLQGTGHFY
Trigger: GTAGAAGTGTCCGGTACCCTGAAGACACCCATGCCACTGTTGTGTTTGATATTGACGCCACATATAGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532882.2
ENST00000677795.1
CDS CAA 90 bp CCATTAAAGTGCTGCGGAAGGAGAAGCCAAAGTAAACAGATGGCCTaGGGAGAGGGTTTCCATGTCTATTCTGGGCTGAGAAAGCAGATA +
Preference number: 6 (lower is better)
Translates to: PLKCCGRRSQSKQMA*GEGFHVYSGLRKQI
Trigger: TATCTGCTTTCTCAGCCCAGAATAGACATGGAAACCCTCTCCCAAGGCCATCTGTTTACTTTGGCTTCTCCTTCCGCAGCACTTTAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS TCA 72 bp TCAACTCCTTTTACCTGGTATGCTCATCACCGGTTTTaGTCTCATGTGAATGGTATGTGGCCTCTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: STPFTWYAHHRF*SHVNGMWPLVL
Trigger: CAGCACCAGAGGCCACATACCATTCACATGAGATCAAAACCGGTGATGAGCATACCAGGTAAAAGGAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528653.2
ENST00000528763.2
ENST00000677795.1
CDS TCA 72 bp GGGACCAGAATTCTCCAGGGAACTGAAACTGTGGTGTaGTCGCCAACTTCTCCCTCTAATCATCACCAAATA +
Preference number: 6 (lower is better)
Translates to: GTRILQGTETVV*SPTSPSNHHQI
Trigger: TATTTGGTGATGATTAGAGGGAGAAGTTGGCGATCACACCACAGTTTCAGTTCCCTGGAGAATTCTGGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532882.2
ENST00000677179.1
ENST00000677795.1
CDS TCA 72 bp GGGTTTCTCACATTAGGTACTAATATTAGGGGACACTaGGGGACACAGATCAGGCTCAGACGTTTAGGACAG +
Preference number: 6 (lower is better)
Translates to: GFLTLGTNIRGH*GTQIRLRRLGQ
Trigger: CTGTCCTAAACGTCTGAGCCTGATCTGTGTCCCTCAGTGTCCCCTAATATTAGTACCTAATGTGAGAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS GCA 72 bp GGACACTTCTACGGTAGGACACCTAGTGACACCAACTaGCAAGAGCAATACACACACCGAAAACTATGTCAA +
Preference number: 6 (lower is better)
Translates to: GHFYGRTPSDTN*QEQYTHRKLCQ
Trigger: TTGACATAGTTTTCGGTGTGTGTATTGCTCTTGGCAGTTGGTGTCACTAGGTGTCCTACCGTAGAAGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532882.2
ENST00000677795.1
CDS CAA 72 bp CTCAACTCCTTTTACCTGGTATGCTCATCACCGGTTTaGATCTCATGTGAATGGTATGTGGCCTCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: LNSFYLVCSSPV*ISCEWYVASGA
Trigger: AGCACCAGAGGCCACATACCATTCACATGAGATCAAAACCGGTGATGAGCATACCAGGTAAAAGGAGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528653.2
ENST00000528763.2
ENST00000677795.1
CDS CAA 72 bp GGTGATACTTCTCGGAGCACTGAAATAGTCCCGCCGTaGGTAATTTCTTCTGGAATTTGTGCGCTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: GDTSRSTEIVPP*VISSGICALCF
Trigger: AAAGCAGAGCGCACAAATTCCAGAAGAAATTACCAACGGCGGGACTATTTCAGTGCTCCGAGAAGTATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533626.5
CDS TCA 72 bp CACAACTACTCCTTGTGTATTTTATGTCGCTTAAAGTaGCAGCAATCCGGCAGGAGAGAGAGGAGAGATGCA +
Preference number: 6 (lower is better)
Translates to: HNYSLCILCRLK*QQSGRRERRDA
Trigger: TGCATCTCTCCTCTCTCTCCTGCCGGATTGCTGTCACTTTAAGCGACATAAAATACACAAGGAGTAGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS GCA 72 bp ATTATAACCACTGAGCCCTACCATTTCATCAGCACATaGCTCAGTGATCCCAGGATAGAGAACTATGTCCTC +
Preference number: 6 (lower is better)
Translates to: IITTEPYHFIST*LSDPRIENYVL
Trigger: GAGGACATAGTTCTCTATCCTGGGATCACTGAGGCATGTGCTGATGAAATGGTAGGGCTCAGTGGTTATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677795.1
CDS CCA 72 bp GTAGGATGCAGATATAGATTAAGAGGTCATTGGGGATaGGAGGAAAGGACGGTAGGACACCAGGAATTAAAG +
Preference number: 6 (lower is better)
Translates to: VGCRYRLRGHWG*EERTVGHQELK
Trigger: CTTTAATTCCTGGTGTCCTACCGTCCTTTCCTCCCATCCCCAATGACCTCTTAATCTATATCTGCATCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS CAA 90 bp CTAATAGAGCTCAACTCCTTTTACCTGGTATGCTCATCACCGGTTTaGATCTCATGTGAATGGTATGTGGCCTCTGGTGCTGATCATTTC +
Preference number: 6 (lower is better)
Translates to: LIELNSFYLVCSSPV*ISCEWYVASGADHF
Trigger: GAAATGATCAGCACCAGAGGCCACATACCATTCACATGAGATCAAAACCGGTGATGAGCATACCAGGTAAAAGGAGTTGAGCTCTATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528653.2
ENST00000528763.2
ENST00000677795.1
CDS GCA 72 bp TTCCCAACATCCCCCATAACTGGCATTTTAACCACCTaGAAGCTCAACGTGTTCACTGTAATGTCATTGTCA +
Preference number: 6 (lower is better)
Translates to: FPTSPITGILTT*KLNVFTVMSLS
Trigger: TGACAATGACATTACAGTGAACACGTTGAGCTTGCAGGTGGTTAAAATGCCAGTTATGGGGGATGTTGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS CCA 72 bp GCTTCATCTGTACCTCCCTTTAGCCATCTGGTCCCATaGTCAGTCTTAACCTTATCATCATCCAGAAATCTA +
Preference number: 6 (lower is better)
Translates to: ASSVPPFSHLVP*SVLTLSSSRNL
Trigger: TAGATTTCTGGATGATGATAAGGTTAAGACTGACCATGGGACCAGATGGCTAAAGGGAGGTACAGATGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532882.2
ENST00000677179.1
ENST00000677795.1
CDS CAA 72 bp CAGGCATTGAGCCACTGCTCACAGTCAGTAATACACTaGCAATACTCTTGCCTCCAAAAGGAAGAGTATAAG +
Preference number: 6 (lower is better)
Translates to: QALSHCSQSVIH*QYSCLQKEEYK
Trigger: CTTATACTCTTCCTTTTGGAGGCAAGAGTATTGCAAGTGTATTACTGACTGTGAGCAGTGGCTCAATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532882.2
ENST00000677795.1
CDS CAA 90 bp TCCAATGACATAATTCCTAACCTGACATACTTGCCCACATCTCTTTaGCACTCCAGACCTTTAGTCAACCCCTACCTTCCCTTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: SNDIIPNLTYLPTSL*HSRPLVNPYLPFLL
Trigger: AAGAAGAAAGGGAAGGTAGGGGTTGACTAAAGGTCTGGAGTGCAAAAGAGATGTGGGCAAGTATGTCAGGTTAGGAATTATGTCATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS TCA 72 bp AAGTATTGCCTCTATAACACCTATAGCACTGTACCATaGTTCCAGTCTGGAAGAGGATCTGAGGATGTAGAT +
Preference number: 6 (lower is better)
Translates to: KYCLYNTYSTVP*FQSGRGSEDVD
Trigger: ATCTACATCCTCAGATCCTCTTCCAGACTGGAATCATGGTACAGTGCTATAGGTGTTATAGAGGCAATACTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS GCA 72 bp TTCCTCCTAATAGAGCTCAACTCCTTTTACCTGGTATaGTCATCACCGGTTTTGATCTCATGTGAATGGTAT +
Preference number: 6 (lower is better)
Translates to: FLLIELNSFYLV*SSPVLISCEWY
Trigger: ATACCATTCACATGAGATCAAAACCGGTGATGAGCATACCAGGTAAAAGGAGTTGAGCTCTATTAGGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528653.2
ENST00000528763.2
ENST00000677795.1
CDS CCA 72 bp CATCTTTGTCTTACTGTGTACTGTGTAAGAGTTAACTaGCTATGTCAGTGTCAGACACAGAACCAGCACAAA +
Preference number: 6 (lower is better)
Translates to: HLCLTVYCVRVN*LCQCQTQNQHK
Trigger: TTTGTGCTGGTTCTGTGTCTGACACTGACATAGCCAGTTAACTCTTACACAGTACACAGTAAGACAAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS CAA 90 bp CCCCAAGTCACATGGCAAATGTTTTGTGAGGTCTGCTTACAAATCTaGTCTGCTTTGCAATATACCAACTGTCTTCTATGGTGTAAGAAC +
Preference number: 6 (lower is better)
Translates to: PQVTWQMFCEVCLQI*SALQYTNCLLWCKN
Trigger: GTTCTTACACCATAGAAGACAGTTGGTATATTGCAAAGCAGACAAGATTTGTAAGCAGACCTCACAAAACATTTGCCATGTGACTTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS CAA 90 bp AATTACCTTCTATATTCCAATGACATAATTCCTAACCTGACATACTaGCCCACATCTCTTTTGCACTCCAGACCTTTAGTCAACCCCTAC +
Preference number: 6 (lower is better)
Translates to: NYLLYSNDIIPNLTY*PTSLLHSRPLVNPY
Trigger: GTAGGGGTTGACTAAAGGTCTGGAGTGCAAAAGAGATGTGGGCAAGTATGTCAGGTTAGGAATTATGTCATTGGAATATAGAAGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS GCA 72 bp GCTACAAAGGCAGAATTAAGTAGTTGTGATAGAGACTaGACACAAAGCCTAAAATATTTACCGTCTGGACCT +
Preference number: 6 (lower is better)
Translates to: ATKAELSSCDRD*TQSLKYLPSGP
Trigger: AGGTCCAGACGGTAAATATTTTAGGCTTTGTGTGCAGTCTCTATCACAACTACTTAATTCTGCCTTTGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS CCA 72 bp CTTGCTCAAATACTTAAAAGGGCAATGAGTAGAAACTaGAGTACAACTAGGATCAGCGGTAGAAATTACAGG +
Preference number: 6 (lower is better)
Translates to: LAQILKRAMSRN*STTRISGRNYR
Trigger: CCTGTAATTTCTACCGCTGATCCTAGTTGTACTCCAGTTTCTACTCATTGCCCTTTTAAGTATTTGAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS CCA 72 bp TTTGTCAATACCTGGAAAACGATGACATTTAGTCAGTaGATAAGGGAGAAATATGTGGTCACTGGTATAGGG +
Preference number: 6 (lower is better)
Translates to: FVNTWKTMTFSQ*IREKYVVTGIG
Trigger: CCCTATACCAGTGACCACATATTTCTCCCTTATCCACTGACTAAATGTCATCGTTTTCCAGGTATTGACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS CAA 72 bp CTATATTCCAATGACATAATTCCTAACCTGACATACTaGCCCACATCTCTTTTGCACTCCAGACCTTTAGTC +
Preference number: 6 (lower is better)
Translates to: LYSNDIIPNLTY*PTSLLHSRPLV
Trigger: GACTAAAGGTCTGGAGTGCAAAAGAGATGTGGGCAAGTATGTCAGGTTAGGAATTATGTCATTGGAATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS CCA 72 bp TCCTTTGACAACTGGTTAGAAAACTTTGTCAATACCTaGAAAACGATGACATTTAGTCAGTGGATAAGGGAG +
Preference number: 6 (lower is better)
Translates to: SFDNWLENFVNT*KTMTFSQWIRE
Trigger: CTCCCTTATCCACTGACTAAATGTCATCGTTTTCCAGGTATTGACAAAGTTTTCTAACCAGTTGTCAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS TCA 72 bp TGTAGGAACTATGGAATAGTTAGGTCCTACAAAAGATaGCTTGACAGCTTGCTCAAATACTTAAAAGGGCAA +
Preference number: 6 (lower is better)
Translates to: CRNYGIVRSYKR*LDSLLKYLKGQ
Trigger: TTGCCCTTTTAAGTATTTGAGCAAGCTGTCAAGTCATCTTTTGTAGGACCTAACTATTCCATAGTTCCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS TCA 72 bp GTAATTCAGAAAAGTAATGAATGTGGTGAAGGATCATaGCAAGAATACCATGTGATGATTGGCTGTAGGAAC +
Preference number: 6 (lower is better)
Translates to: VIQKSNECGEGS*QEYHVMIGCRN
Trigger: GTTCCTACAGCCAATCATCACATGGTATTCTTGTCATGATCCTTCACCACATTCATTACTTTTCTGAATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677866.1
CDS CCA 72 bp AAATCTGGCACTAAGATGGAATGGAAACGAATTTCATaGGACCAGCATAGTCTCCAGAAAGGAATTTATTAT +
Preference number: 6 (lower is better)
Translates to: KSGTKMEWKRIS*DQHSLQKGIYY
Trigger: ATAATAAATTCCTTTCTGGAGACTATGCTGGTCCCATGAAATTCGTTTCCATTCCATCTTAGTGCCAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677179.1
CDS CAA 72 bp CATATATCCTTTATCTTATTTGACCTCTCATCAGCGTaGAACAGACTTGACCACTTACTTCCCATCTTAAAA +
Preference number: 6 (lower is better)
Translates to: HISFILFDLSSA*NRLDHLLPILK
Trigger: TTTTAAGATGGGAAGTAAGTGGTCAAGTCTGTTCAACGCTGATGAGAGGTCAAATAAGATAAAGGATATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677179.1