Pregenerated sensors for EIF3C (Homo sapiens)
Ensembl gene IDs: ENSG00000184110Ensembl transcript IDs: ENST00000395587.5, ENST00000564839.1, ENST00000566501.5
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGCTGGGTCTCAGACCTCACTGGAGAGAGGTGGCTGCAGCCCATTaGACGGTGAGGTTGGCTGGGTTGCCCCAGGTCACGGCTGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: RLGLRPHWREVAAAH*TVRLAGLPQVTAGP Trigger: TGGACCAGCCGTGACCTGGGGCAACCCAGCCAACCTCACCGTCCAATGGGCTGCAGCCACCTCTCTCCAGTGAGGTCTGAGACCCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS GCA 90 bp | AGCCTCGTTAAGGCTGGGTCTCAGACCTCACTGGAGAGAGGTGGCTaGAGCCCATTGGACGGTGAGGTTGGCTGGGTTGCCCCAGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: SLVKAGSQTSLERGG*SPLDGEVGWVAPGH Trigger: GTGACCTGGGGCAACCCAGCCAACCTCACCGTCCAATGGGCTGCAGCCACCTCTCTCCAGTGAGGTCTGAGACCCAGCCTTAACGAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS GCA 90 bp | CCTGGCCCTTGCCTGGTCTCCCACGATTCTCCCTCTGGCTTCCTGTaGTGGAGTCCCACTGGCCTTTTTACTCCTGGAACATCAAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: PGPCLVSHDSPSGFL*WSPTGLFTPGTSSS Trigger: CGAGCTTGATGTTCCAGGAGTAAAAAGGCCAGTGGGACTCCAGCACAGGAAGCCAGAGGGAGAATCGTGGGAGACCAGGCAAGGGCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564839.1 |
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| CDS CCA 90 bp | GGCCCTTGCCTGGTCTCCCACGATTCTCCCTCTGGCTTCCTGTGCTaGAGTCCCACTGGCCTTTTTACTCCTGGAACATCAAGCTCGCTC | + |
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Preference number: 5 (lower is better) Translates to: GPCLVSHDSPSGFLC*SPTGLFTPGTSSSL Trigger: GAGCGAGCTTGATGTTCCAGGAGTAAAAAGGCCAGTGGGACTCCAGCACAGGAAGCCAGAGGGAGAATCGTGGGAGACCAGGCAAGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564839.1 |
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| CDS CCA 90 bp | TCCCTCTGGCTTCCTGTGCTGGAGTCCCACTGGCCTTTTTACTCCTaGAACATCAAGCTCGCTCTCTGCTCCTCCTGTCAGGCGCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: SLWLPVLESHWPFYS*NIKLALCSSCQALS Trigger: AGACAGCGCCTGACAGGAGGAGCAGAGAGCGAGCTTGATGTTCCAGGAGTAAAAAGGCCAGTGGGACTCCAGCACAGGAAGCCAGAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564839.1 |
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| CDS CCA 90 bp | GGTCTCCCACGATTCTCCCTCTGGCTTCCTGTGCTGGAGTCCCACTaGCCTTTTTACTCCTGGAACATCAAGCTCGCTCTCTGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GLPRFSLWLPVLESH*PFYSWNIKLALCSS Trigger: GGAGGAGCAGAGAGCGAGCTTGATGTTCCAGGAGTAAAAAGGCCAGTGGGACTCCAGCACAGGAAGCCAGAGGGAGAATCGTGGGAGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564839.1 |
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| CDS-3UTR CAA 90 bp | CGTGTTCAATTCACCTCTTCATCTGAGCCTTGTGTCTGTCATGTGGTAGCAGCTGTGCTCCACGTACTCTaGGGAGTGAGGGTCAGTATT | + |
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Preference number: 5 (lower is better) Translates to: RVQFTSSSEPCVCHVVAAVLHVL*GVRVSI Trigger: AATACTGACCCTCACTCCCAAGAGTACGTGGAGCAC...AGCTGCTACCACATGACAGACACAAGGCTCAGATGAAGAGGTGAATTGAACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395587.5 |
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| CDS-3UTR CAA 90 bp | GTCAGGAACGTGTTCAATTCACCTCTTCATCTGAGCCTTGTGTCTGTCATGTGGGCCTTGGCATTGTTCTaGTTCATCTTCTTCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: VRNVFNSPLHLSLVSVMWALALF*FIFFFP Trigger: AGGGAAGAAGAAGATGAACAAGAACAATGCCAAGGC...CCACATGACAGACACAAGGCTCAGATGAAGAGGTGAATTGAACACGTTCCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395587.5 |
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| CDS-3UTR CAA 90 bp | CGTGTTCAATTCACCTCTTCATCTGAGCCTTGTGTCTGTCATGTGGTAGCAGCTCTCAGAGCCTTGGCATaGTTCTTGTTCATCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RVQFTSSSEPCVCHVVAALRALA*FLFIFF Trigger: GAAGAAGATGAACAAGAACAATGCCAAGGCTCTGAG...AGCTGCTACCACATGACAGACACAAGGCTCAGATGAAGAGGTGAATTGAACACG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395587.5 |
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| CDS CCA 72 bp | TGGGTTGCCCCAGGTCACGGCTGGTCCACAACCAGCTaGCCGAGGCTGGTGGCCAGGGGACCACAAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: WVAPGHGWSTTS*PRLVARGPQAE Trigger: TTCTGCTTGTGGTCCCCTGGCCACCAGCCTCGGCCAGCTGGTTGTGGACCAGCCGTGACCTGGGGCAACCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS TCA 72 bp | CTCACTGGAGAGAGGTGGCTGCAGCCCATTGGACGGTaGGGTTGGCTGGGTTGCCCCAGGTCACGGCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LTGERWLQPIGR*GWLGCPRSRLV Trigger: GACCAGCCGTGACCTGGGGCAACCCAGCCAACCTCACCGTCCAATGGGCTGCAGCCACCTCTCTCCAGTGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS CAA 90 bp | AGACCTCACTGGAGAGAGGTGGCTGCAGCCCATTGGACGGTGAGGTaGGCTGGGTTGCCCCAGGTCACGGCTGGTCCACAACCAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RPHWREVAAAHWTVR*AGLPQVTAGPQPAG Trigger: GCCAGCTGGTTGTGGACCAGCCGTGACCTGGGGCAACCCAGCCAACCTCACCGTCCAATGGGCTGCAGCCACCTCTCTCCAGTGAGGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS CAA 90 bp | AAGGCTGGGTCTCAGACCTCACTGGAGAGAGGTGGCTGCAGCCCATaGGACGGTGAGGTTGGCTGGGTTGCCCCAGGTCACGGCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: KAGSQTSLERGGCSP*DGEVGWVAPGHGWS Trigger: GGACCAGCCGTGACCTGGGGCAACCCAGCCAACCTCACCGTCCAATGGGCTGCAGCCACCTCTCTCCAGTGAGGTCTGAGACCCAGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS TCA 72 bp | CTGGGAACCACACACTGGGGCTGGCAGGCAGGAAGTTaGATGCCACTGTGTGTCCGGTGCAGGGCTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LGTTHWGWQAGS*MPLCVRCRAAC Trigger: GCAGGCAGCCCTGCACCGGACACACAGTGGCATTCAACTTCCTGCCTGCCAGCCCCAGTGTGTGGTTCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS CCA 72 bp | CTCAGACCTCACTGGAGAGAGGTGGCTGCAGCCCATTaGACGGTGAGGTTGGCTGGGTTGCCCCAGGTCACG | + |
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Preference number: 6 (lower is better) Translates to: LRPHWREVAAAH*TVRLAGLPQVT Trigger: CGTGACCTGGGGCAACCCAGCCAACCTCACCGTCCAATGGGCTGCAGCCACCTCTCTCCAGTGAGGTCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS CAA 72 bp | GCTGGGAACCACACACTGGGGCTGGCAGGCAGGAAGTaGAATGCCACTGTGTGTCCGGTGCAGGGCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: AGNHTLGLAGRK*NATVCPVQGCL Trigger: CAGGCAGCCCTGCACCGGACACACAGTGGCATTCAACTTCCTGCCTGCCAGCCCCAGTGTGTGGTTCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS CAA 72 bp | TGGAGAGAGGTGGCTGCAGCCCATTGGACGGTGAGGTaGGCTGGGTTGCCCCAGGTCACGGCTGGTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: WREVAAAHWTVR*AGLPQVTAGPQ Trigger: TTGTGGACCAGCCGTGACCTGGGGCAACCCAGCCAACCTCACCGTCCAATGGGCTGCAGCCACCTCTCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS GCA 72 bp | AAGGCTGGGTCTCAGACCTCACTGGAGAGAGGTGGCTaGAGCCCATTGGACGGTGAGGTTGGCTGGGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: KAGSQTSLERGG*SPLDGEVGWVA Trigger: GGCAACCCAGCCAACCTCACCGTCCAATGGGCTGCAGCCACCTCTCTCCAGTGAGGTCTGAGACCCAGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS CCA 72 bp | GGGGTAGCCTCGTTAAGGCTGGGTCTCAGACCTCACTaGAGAGAGGTGGCTGCAGCCCATTGGACGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GVASLRLGLRPH*REVAAAHWTVR Trigger: CCTCACCGTCCAATGGGCTGCAGCCACCTCTCTCCAGTGAGGTCTGAGACCCAGCCTTAACGAGGCTACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS CAA 72 bp | TCTCAGACCTCACTGGAGAGAGGTGGCTGCAGCCCATaGGACGGTGAGGTTGGCTGGGTTGCCCCAGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: SQTSLERGGCSP*DGEVGWVAPGH Trigger: GTGACCTGGGGCAACCCAGCCAACCTCACCGTCCAATGGGCTGCAGCCACCTCTCTCCAGTGAGGTCTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566501.5 |
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| CDS CCA 72 bp | TCTGCCAATAAGGGTCTGCCAGGCCTGGCCCTTGCCTaGTCTCCCACGATTCTCCCTCTGGCTTCCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SANKGLPGLALA*SPTILPLASCA Trigger: AGCACAGGAAGCCAGAGGGAGAATCGTGGGAGACCAGGCAAGGGCCAGGCCTGGCAGACCCTTATTGGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564839.1 |
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| CDS CCA 72 bp | AACTGCCAACCTCTGCCAATAAGGGTCTGCCAGGCCTaGCCCTTGCCTGGTCTCCCACGATTCTCCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: NCQPLPIRVCQA*PLPGLPRFSLW Trigger: CCAGAGGGAGAATCGTGGGAGACCAGGCAAGGGCCAGGCCTGGCAGACCCTTATTGGCAGAGGTTGGCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564839.1 |
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| CDS GCA 72 bp | TGCCTGGTCTCCCACGATTCTCCCTCTGGCTTCCTGTaGTGGAGTCCCACTGGCCTTTTTACTCCTGGAACA | + |
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Preference number: 6 (lower is better) Translates to: CLVSHDSPSGFL*WSPTGLFTPGT Trigger: TGTTCCAGGAGTAAAAAGGCCAGTGGGACTCCAGCACAGGAAGCCAGAGGGAGAATCGTGGGAGACCAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564839.1 |
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| CDS GCA 72 bp | AAAAATCCCAACTGCCAACCTCTGCCAATAAGGGTCTaGCAGGCCTGGCCCTTGCCTGGTCTCCCACGATTC | + |
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Preference number: 6 (lower is better) Translates to: KNPNCQPLPIRV*QAWPLPGLPRF Trigger: GAATCGTGGGAGACCAGGCAAGGGCCAGGCCTGGCAGACCCTTATTGGCAGAGGTTGGCAGTTGGGATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564839.1 |
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| CDS CCA 72 bp | CTTCCTGTGCTGGAGTCCCACTGGCCTTTTTACTCCTaGAACATCAAGCTCGCTCTCTGCTCCTCCTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: LPVLESHWPFYS*NIKLALCSSCQ Trigger: CTGACAGGAGGAGCAGAGAGCGAGCTTGATGTTCCAGGAGTAAAAAGGCCAGTGGGACTCCAGCACAGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564839.1 |
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| CDS CCA 72 bp | CGATTCTCCCTCTGGCTTCCTGTGCTGGAGTCCCACTaGCCTTTTTACTCCTGGAACATCAAGCTCGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: RFSLWLPVLESH*PFYSWNIKLAL Trigger: GAGAGCGAGCTTGATGTTCCAGGAGTAAAAAGGCCAGTGGGACTCCAGCACAGGAAGCCAGAGGGAGAATCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564839.1 |
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| CDS CCA 72 bp | CTGGTCTCCCACGATTCTCCCTCTGGCTTCCTGTGCTaGAGTCCCACTGGCCTTTTTACTCCTGGAACATCA | + |
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Preference number: 6 (lower is better) Translates to: LVSHDSPSGFLC*SPTGLFTPGTS Trigger: TGATGTTCCAGGAGTAAAAAGGCCAGTGGGACTCCAGCACAGGAAGCCAGAGGGAGAATCGTGGGAGACCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564839.1 |
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