Pregenerated sensors for EIF2S3B (Homo sapiens)
Ensembl gene IDs: ENSG00000180574Ensembl transcript IDs: ENST00000322446.3
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATGAAGTCCAGGTGTAGGGCTGGCTGTAAACATGTTGCAATAAGATTTTCAGGACCCATAATTGTGATATaGTTGTCACAATTCCGGGCA | + |
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Preference number: 2 (lower is better) Translates to: MKSRCRAGCKHVAIRFSGPIIVI*LSQFRA Trigger: TGCCCGGAATTGTGACAACCATATCACAATTATGGG...TCCTGAAAATCTTATTGCAACATGTTTACAGCCAGCCCTACACCTGGACTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322446.3 |
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| CDS-3UTR GCA 90 bp | CGGGCATCACAGCCTGCAAAGAATCTCCAGAGCAGAAAGGGGATCATGTTTTCTCGCGAAAGGTGCGGCTaGCCCAGAGTCACCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RASQPAKNLQSRKGIMFSRERCG*PRVTPA Trigger: AGCTGGGGTGACTCTGGGGCAGCCGCACCTTTCGCG...AGAAAACATGATCCCCTTTCTGCTCTGGAGATTCTTTGCAGGCTGTGATGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000322446.3 |
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| CDS-3UTR CCA 90 bp | ATGGTTGTCACAATTCCGGGCATCACAGCCTGCAAAGAATCTCCAGAGCAGAAAAGCGGCCTCAGTGCTTaGACTTCTCTCTGCTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: MVVTIPGITACKESPEQKSGLSA*TSLCLN Trigger: ATTCAAGCAGAGAGAAGTCCAAGCACTGAGGCCGCT...TTTCTGCTCTGGAGATTCTTTGCAGGCTGTGATGCCCGGAATTGTGACAACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322446.3 |
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| CDS-3UTR GCA 90 bp | ATGAAGTCCAGGTGTAGGGCTGGCTGTAAACATGTTGCAATAAGATTTTCAGGACCGGGCATCACAGCCTaGAAAGAATCTCCAGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: MKSRCRAGCKHVAIRFSGPGITA*KESPEQ Trigger: CTGCTCTGGAGATTCTTTGCAGGCTGTGATGCCCGG...TCCTGAAAATCTTATTGCAACATGTTTACAGCCAGCCCTACACCTGGACTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322446.3 |
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| CDS-3UTR CCA 90 bp | TGGTTGTCACAATTCCGGGCATCACAGCCTGCAAAGAATCTCCAGAGCAGAAAGCCCATAATTGTGATATaGTTGTCACAATTCCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: WLSQFRASQPAKNLQSRKPIIVI*LSQFRA Trigger: TGCCCGGAATTGTGACAACCATATCACAATTATGGG...CTTTCTGCTCTGGAGATTCTTTGCAGGCTGTGATGCCCGGAATTGTGACAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322446.3 |
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| CDS-3UTR CCA 90 bp | AGGAACCTAAGTTCTTCCCATAATTGTGATATGGTTGTCACAATTCCGGGCATCTCTGCTACTGTACCTTaGACAAACGCAAGGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: RNLSSSHNCDMVVTIPGISATVP*TNARIC Trigger: GCAGATCCTTGCGTTTGTCCAAGGTACAGTAGCAGA...GATGCCCGGAATTGTGACAACCATATCACAATTATGGGAAGAACTTAGGTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322446.3 |
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| CDS-3UTR GCA 90 bp | ATGAAGTCCAGGTGTAGGGCTGGCTGTAAACATGTTGCAATAAGATTTTCAGGATTCCTAGAAGTTTGCTaGAGACTTCCTCTGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: MKSRCRAGCKHVAIRFSGFLEVC*RLPLCL Trigger: GAGACACAGAGGAAGTCTGCAGCAAACTTCTAGGAA...TCCTGAAAATCTTATTGCAACATGTTTACAGCCAGCCCTACACCTGGACTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322446.3 |
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| CDS-3UTR GCA 90 bp | ATGAAGTCCAGGTGTAGGGCTGGCTGTAAACATGTTGCAATAAGATTTTCAGGATTAGATGAATCTCTGTaGACACTGGATTGGTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: MKSRCRAGCKHVAIRFSGLDESL*TLDWSK Trigger: TTTTGACCAATCCAGTGTGCACAGAGATTCATCTAA...TCCTGAAAATCTTATTGCAACATGTTTACAGCCAGCCCTACACCTGGACTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322446.3 |
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| CDS-3UTR CAA 90 bp | ATGGTTGTCACAATTCCGGGCATCACAGCCTGCAAAGAATCTCCAGAGCAGAAACTCTGCTACTGTACCTaGGACAAACGCAAGGATCTG | + |
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Preference number: 5 (lower is better) Translates to: MVVTIPGITACKESPEQKLCYCT*DKRKDL Trigger: CAGATCCTTGCGTTTGTCCAAGGTACAGTAGCAGAG...TTTCTGCTCTGGAGATTCTTTGCAGGCTGTGATGCCCGGAATTGTGACAACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322446.3 |
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| CDS-3UTR CAA 90 bp | TCACAATTCCGGGCATCACAGCCTGCAAAGAATCTCCAGAGCAGAAAGGGGATCACTTGGGTCATCAAGTaGATAAATCTTAGCATTAGC | + |
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Preference number: 5 (lower is better) Translates to: SQFRASQPAKNLQSRKGITWVIK*INLSIS Trigger: GCTAATGCTAAGATTTATCAACTTGATGACCCAAGT...GATCCCCTTTCTGCTCTGGAGATTCTTTGCAGGCTGTGATGCCCGGAATTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322446.3 |
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| CDS-3UTR CAA 90 bp | AGGAACCTAAGTTCTTCCCATAATTGTGATATGGTTGTCACAATTCCGGGCATCTTCCTCTGTGTCTCATaGGTAAGAACTGGGCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: RNLSSSHNCDMVVTIPGIFLCVS*VRTGPH Trigger: ATGGGGCCCAGTTCTTACCAATGAGACACAGAGGAA...GATGCCCGGAATTGTGACAACCATATCACAATTATGGGAAGAACTTAGGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322446.3 |
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