RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF2D (Homo sapiens)

Ensembl gene IDs: ENSG00000143486

Ensembl transcript IDs: ENST00000271764.7, ENST00000367114.7, ENST00000437518.1, ENST00000461334.1, ENST00000468891.2, ENST00000472709.6, ENST00000474408.1, ENST00000484492.5, ENST00000613435.1, ENST00000617960.4, ENST00000620382.4

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGTGGTCTGGGACTGAACAGCTGGAAAGTATGGTCACTTCTCCATaGGGCACAGCAGGCATCGTGCCACAGGCACACACGACTTTAGAG +
Preference number: 1 (lower is better)
Translates to: GWSGTEQLESMVTSP*GTAGIVPQAHTTLE
Trigger: CTCTAAAGTCGTGTGTGCCTGTGGCACGATGCCTGCTGTGCCTCATGGAGAAGTGACCATACTTTCCAGCTGTTCAGTCCCAGACCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 90 bp GGGTGTGGCAGGCCGGCCCCTTCAGCAAAAGATGCCGTCCCATGGTaGCTACATGGTGAATTGAGAAGAGCATGGGCCTTAGATGGATTT +
Preference number: 1 (lower is better)
Translates to: GCGRPAPSAKDAVPW*LHGELRRAWALDGF
Trigger: AAATCCATCTAAGGCCCATGCTCTTCTCAATTCACCATGTAGCCACCATGGGACGGCATCTTTTGCTGAAGGGGCCGGCCTGCCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 90 bp TATGGGTGTGGCAGGCCGGCCCCTTCAGCAAAAGATGCCGTCCCATaGTGGCTACATGGTGAATTGAGAAGAGCATGGGCCTTAGATGGA +
Preference number: 1 (lower is better)
Translates to: YGCGRPAPSAKDAVP*WLHGELRRAWALDG
Trigger: TCCATCTAAGGCCCATGCTCTTCTCAATTCACCATGTAGCCACCATGGGACGGCATCTTTTGCTGAAGGGGCCGGCCTGCCACACCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 90 bp AGTACTCTGGTTCAGGGTGGTCTGGGACTGAACAGCTGGAAAGTATaGTCACTTCTCCATGAGGCACAGCAGGCATCGTGCCACAGGCAC +
Preference number: 1 (lower is better)
Translates to: STLVQGGLGLNSWKV*SLLHEAQQASCHRH
Trigger: GTGCCTGTGGCACGATGCCTGCTGTGCCTCATGGAGAAGTGACCATACTTTCCAGCTGTTCAGTCCCAGACCACCCTGAACCAGAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 90 bp ATTTCTCCGGCAAGTGGGAGATGGCCAGAGCTGCTTGCCCTTGGGTaGTCTGCAACAGAATCAAGGTTCAGTTCCAGAGACAGGCTTTGG +
Preference number: 1 (lower is better)
Translates to: ISPASGRWPELLALG*SATESRFSSRDRLW
Trigger: CCAAAGCCTGTCTCTGGAACTGAACCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 90 bp TTTAATTTCTCCGGCAAGTGGGAGATGGCCAGAGCTGCTTGCCCTTaGGTGGTCTGCAACAGAATCAAGGTTCAGTTCCAGAGACAGGCT +
Preference number: 1 (lower is better)
Translates to: FNFSGKWEMARAACP*VVCNRIKVQFQRQA
Trigger: AGCCTGTCTCTGGAACTGAACCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAGAAATTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 90 bp CACGACTTTAGAGGTCCACAAAAACGTTTTAATTTCTCCGGCAAGTaGGAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTCTGCAACAGA +
Preference number: 1 (lower is better)
Translates to: HDFRGPQKRFNFSGK*EMARAACPWVVCNR
Trigger: TCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAGAAATTAAAACGTTTTTGTGGACCTCTAAAGTCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR TCA 90 bp TCCTTAATTAACTCTGCAGTACTCTGGTTCAGGGTGGTCTGGGACTaGACAGCTGGAAAGTATGGTCACTTCTCCATGAGGCACAGCAGG +
Preference number: 1 (lower is better)
Translates to: SLINSAVLWFRVVWD*TAGKYGHFSMRHSR
Trigger: CCTGCTGTGCCTCATGGAGAAGTGACCATACTTTCCAGCTGTTCAGTCCCAGACCACCCTGAACCAGAGTACTGCAGAGTTAATTAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR GCA 90 bp AAACGTTTTAATTTCTCCGGCAAGTGGGAGATGGCCAGAGCTGCTTaGCCTTGGGTGGTCTGCAACAGAATCAAGGTTCAGTTCCAGAGA +
Preference number: 1 (lower is better)
Translates to: KRFNFSGKWEMARAA*PWVVCNRIKVQFQR
Trigger: TCTCTGGAACTGAACCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAGAAATTAAAACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR GCA 90 bp AAACACCTGGTCAGAAGACTGTCCCATGGAAGCTTCATGACTGTATaGTGTTCATTTTTCTCTAAGATGCAGTCACATAGGATGGGATCC +
Preference number: 1 (lower is better)
Translates to: KHLVRRLSHGSFMTV*CSFFSKMQSHRMGS
Trigger: GGATCCCATCCTATGTGACTGCATCTTAGAGAAAAATGAACAGCATACAGTCATGAAGCTTCCATGGGACAGTCTTCTGACCAGGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
3UTR-3UTR TCA 90 bp TCTCCGGCAAGTGGGAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTCTGCAACAATGGTGGCTACATGGTaGATTGAGAAGAGCATGGGC +
Preference number: 2 (lower is better)
Translates to: SPASGRWPELLALGWSATMVATW*IEKSMG
Trigger: GCCCATGCTCTTCTCAATTCACCATGTAGCCACCAT...TGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR-3UTR GCA 90 bp GCCTGGGATGGGGTATTGGGATCCACTCACTCACCTACCCACCGTCCATCCTTACTTTGGTTTAACAGCTaGTCATCCCAGCCCCGCAGC +
Preference number: 2 (lower is better)
Translates to: AWDGVLGSTHSPTHRPSLLWFNS*SSQPRS
Trigger: GCTGCGGGGCTGGGATGAGCAGCTGTTAAACCAAAG...TAAGGATGGACGGTGGGTAGGTGAGTGAGTGGATCCCAATACCCCATCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR-3UTR CCA 90 bp GCCTGGGATGGGGTATTGGGATCCACTCACTCACCTACCCACCGTCCATCCTTAGATGCCGTCCCATGGTaGCTACATGGTGAATTGAGA +
Preference number: 2 (lower is better)
Translates to: AWDGVLGSTHSPTHRPSLDAVPW*LHGELR
Trigger: TCTCAATTCACCATGTAGCCACCATGGGACGGCATC...TAAGGATGGACGGTGGGTAGGTGAGTGAGTGGATCCCAATACCCCATCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR-3UTR TCA 90 bp GTGGGAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTCTGCAACAGAATCAAGGTGGCCTTAGATGGATTTaGTTCCAGTTCCTACTTAGC +
Preference number: 2 (lower is better)
Translates to: VGDGQSCLPLGGLQQNQGGLRWI*FQFLLS
Trigger: GCTAAGTAGGAACTGGAATCAAATCCATCTAAGGCC...ACCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR-3UTR TCA 90 bp CTGCAGTACTCTGGTTCAGGGTGGTCTGGGACTGAACAGCTGGAAAGTATGGTCAGCACAGAGTTTCAGTaGTCATTATGGGTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: LQYSGSGWSGTEQLESMVSTEFQ*SLWVWQ
Trigger: CTGCCACACCCATAATGATCACTGAAACTCTGTGCT...GACCATACTTTCCAGCTGTTCAGTCCCAGACCACCCTGAACCAGAGTACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR-3UTR CCA 90 bp AATTTCTCCGGCAAGTGGGAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTCTGCGAATTGAGAAGAGCATaGGCCTTAGATGGATTTGAT +
Preference number: 2 (lower is better)
Translates to: NFSGKWEMARAACPWVVCELRRA*ALDGFD
Trigger: ATCAAATCCATCTAAGGCCCATGCTCTTCTCAATTC...GCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CAA 90 bp GCCCCTTCAGCAAAAGATGCCGTCCCATGGTGGCTACATGGTGAATaGAGAAGAGCATGGGCCTTAGATGGATTTGATTCCAGTTCCTAC +
Preference number: 2 (lower is better)
Translates to: APSAKDAVPWWLHGE*RRAWALDGFDSSSY
Trigger: GTAGGAACTGGAATCAAATCCATCTAAGGCCCATGCTCTTCTCAATTCACCATGTAGCCACCATGGGACGGCATCTTTTGCTGAAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CAA 90 bp AAAGAACTGAGAGAGCTTAGGAGAGAGTTGGCCTGGGATGGGGTATaGGGATCCACTCACTCACCTACCCACCGTCCATCCTTAATTAAC +
Preference number: 2 (lower is better)
Translates to: KELRELRRELAWDGV*GSTHSPTHRPSLIN
Trigger: GTTAATTAAGGATGGACGGTGGGTAGGTGAGTGAGTGGATCCCAATACCCCATCCCAGGCCAACTCTCTCCTAAGCTCTCTCAGTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR-3UTR GCA 90 bp ATCGTGCCACAGGCACACACGACTTTAGAGGTCCACAAAAACGTTTTAATTTCTGGAGATGGCCAGAGCTaGTTGCCCTTGGGTGGTCTG +
Preference number: 2 (lower is better)
Translates to: IVPQAHTTLEVHKNVLISGDGQS*LPLGGL
Trigger: CAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCC...AGAAATTAAAACGTTTTTGTGGACCTCTAAAGTCGTGTGTGCCTGTGGCACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR-3UTR CCA 90 bp CTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCAGGCTGTATGCAGTCACATAGGATaGGATCCAATCTCACAAGAT +
Preference number: 2 (lower is better)
Translates to: LSSQWALVREGSLDRQAVCSHIG*DPISQD
Trigger: ATCTTGTGAGATTGGATCCCATCCTATGTGACTGCA...TACAGCCTGCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484492.5
3UTR-3UTR CCA 90 bp GACGCTCTTTGTGCTAGGGTGATGTCAATTGGACAGATTCTCCCTTTCTTCACACAGAAGACTGTCCCATaGAAGCTTCATGACTGTATG +
Preference number: 2 (lower is better)
Translates to: DALCARVMSIGQILPFFTQKTVP*KLHDCM
Trigger: CATACAGTCATGAAGCTTCCATGGGACAGTCTTCTG...TGTGAAGAAAGGGAGAATCTGTCCAATTGACATCACCCTAGCACAAAGAGCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
3UTR-3UTR GCA 90 bp TTGGACAGATTCTCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTCATTTTTCTCTAAGATaGAGTCACATAGGATGGGAT +
Preference number: 2 (lower is better)
Translates to: LDRFSLSSQWALVREGSLHFSLR*SHIGWD
Trigger: ATCCCATCCTATGTGACTGCATCTTAGAGAAAAATG...AAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGAGAATCTGTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
3UTR CCA 72 bp GGCAGGCCGGCCCCTTCAGCAAAAGATGCCGTCCCATaGTGGCTACATGGTGAATTGAGAAGAGCATGGGCC +
Preference number: 3 (lower is better)
Translates to: GRPAPSAKDAVP*WLHGELRRAWA
Trigger: GGCCCATGCTCTTCTCAATTCACCATGTAGCCACCATGGGACGGCATCTTTTGCTGAAGGGGCCGGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR TCA 72 bp GGGACTGAACAGCTGGAAAGTATGGTCACTTCTCCATaGGGCACAGCAGGCATCGTGCCACAGGCACACACG +
Preference number: 3 (lower is better)
Translates to: GTEQLESMVTSP*GTAGIVPQAHT
Trigger: CGTGTGTGCCTGTGGCACGATGCCTGCTGTGCCTCATGGAGAAGTGACCATACTTTCCAGCTGTTCAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 72 bp TCCGGCAAGTGGGAGATGGCCAGAGCTGCTTGCCCTTaGGTGGTCTGCAACAGAATCAAGGTTCAGTTCCAG +
Preference number: 3 (lower is better)
Translates to: SGKWEMARAACP*VVCNRIKVQFQ
Trigger: CTGGAACTGAACCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 72 bp GAGAGCTTAGGAGAGAGTTGGCCTGGGATGGGGTATTaGGATCCACTCACTCACCTACCCACCGTCCATCCT +
Preference number: 3 (lower is better)
Translates to: ESLGESWPGMGY*DPLTHLPTVHP
Trigger: AGGATGGACGGTGGGTAGGTGAGTGAGTGGATCCCAATACCCCATCCCAGGCCAACTCTCTCCTAAGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 72 bp AGGCCGGCCCCTTCAGCAAAAGATGCCGTCCCATGGTaGCTACATGGTGAATTGAGAAGAGCATGGGCCTTA +
Preference number: 3 (lower is better)
Translates to: RPAPSAKDAVPW*LHGELRRAWAL
Trigger: TAAGGCCCATGCTCTTCTCAATTCACCATGTAGCCACCATGGGACGGCATCTTTTGCTGAAGGGGCCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 72 bp GCAAGTGGGAGATGGCCAGAGCTGCTTGCCCTTGGGTaGTCTGCAACAGAATCAAGGTTCAGTTCCAGAGAC +
Preference number: 3 (lower is better)
Translates to: ASGRWPELLALG*SATESRFSSRD
Trigger: GTCTCTGGAACTGAACCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 72 bp GTTCAGGGTGGTCTGGGACTGAACAGCTGGAAAGTATaGTCACTTCTCCATGAGGCACAGCAGGCATCGTGC +
Preference number: 3 (lower is better)
Translates to: VQGGLGLNSWKV*SLLHEAQQASC
Trigger: GCACGATGCCTGCTGTGCCTCATGGAGAAGTGACCATACTTTCCAGCTGTTCAGTCCCAGACCACCCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR-3UTR CAA 90 bp GATCATTATGGGTGTGGCAGGCCGGCCCCTTCAGCAAAAGATGCCGTCCCATGGTGGCTACATGGTGAATaGAGAAGAGCATGGGCCTTA +
Preference number: 3 (lower is better)
Translates to: DHYGCGRPAPSAKDAVPWWLHGE*RRAWAL
Trigger: TAAGGCCCATGCTCTTCTCAATTCACCATGTAGCCA...CCATGGGACGGCATCTTTTGCTGAAGGGGCCGGCCTGCCACACCCATAATGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR GCA 72 bp AATTTCTCCGGCAAGTGGGAGATGGCCAGAGCTGCTTaGCCTTGGGTGGTCTGCAACAGAATCAAGGTTCAG +
Preference number: 3 (lower is better)
Translates to: NFSGKWEMARAA*PWVVCNRIKVQ
Trigger: CTGAACCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 72 bp AGAGGTCCACAAAAACGTTTTAATTTCTCCGGCAAGTaGGAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTC +
Preference number: 3 (lower is better)
Translates to: RGPQKRFNFSGK*EMARAACPWVV
Trigger: GACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAGAAATTAAAACGTTTTTGTGGACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 72 bp AGTACTCTGGTTCAGGGTGGTCTGGGACTGAACAGCTaGAAAGTATGGTCACTTCTCCATGAGGCACAGCAG +
Preference number: 3 (lower is better)
Translates to: STLVQGGLGLNS*KVWSLLHEAQQ
Trigger: CTGCTGTGCCTCATGGAGAAGTGACCATACTTTCCAGCTGTTCAGTCCCAGACCACCCTGAACCAGAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CCA 72 bp CTGAAAGAACTGAGAGAGCTTAGGAGAGAGTTGGCCTaGGATGGGGTATTGGGATCCACTCACTCACCTACC +
Preference number: 3 (lower is better)
Translates to: LKELRELRRELA*DGVLGSTHSPT
Trigger: GGTAGGTGAGTGAGTGGATCCCAATACCCCATCCCAGGCCAACTCTCTCCTAAGCTCTCTCAGTTCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR TCA 72 bp AACTCTGCAGTACTCTGGTTCAGGGTGGTCTGGGACTaGACAGCTGGAAAGTATGGTCACTTCTCCATGAGG +
Preference number: 3 (lower is better)
Translates to: NSAVLWFRVVWD*TAGKYGHFSMR
Trigger: CCTCATGGAGAAGTGACCATACTTTCCAGCTGTTCAGTCCCAGACCACCCTGAACCAGAGTACTGCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR-3UTR CAA 90 bp TTGGACAGATTCTCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTCTCACAAGATTTTTGTaGTCTGCATCAACCAGGTCA +
Preference number: 3 (lower is better)
Translates to: LDRFSLSSQWALVREGSLLTRFL*SASTRS
Trigger: TGACCTGGTTGATGCAGACAACAAAAATCTTGTGAG...AAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGAGAATCTGTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484492.5
3UTR CCA 72 bp GTCCCATGGTGGCTACATGGTGAATTGAGAAGAGCATaGGCCTTAGATGGATTTGATTCCAGTTCCTACTTA +
Preference number: 3 (lower is better)
Translates to: VPWWLHGELRRA*ALDGFDSSSYL
Trigger: TAAGTAGGAACTGGAATCAAATCCATCTAAGGCCCATGCTCTTCTCAATTCACCATGTAGCCACCATGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR GCA 72 bp GTCAGAAGACTGTCCCATGGAAGCTTCATGACTGTATaGTGTTCATTTTTCTCTAAGATGCAGTCACATAGG +
Preference number: 3 (lower is better)
Translates to: VRRLSHGSFMTV*CSFFSKMQSHR
Trigger: CCTATGTGACTGCATCTTAGAGAAAAATGAACAGCATACAGTCATGAAGCTTCCATGGGACAGTCTTCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
3UTR CCA 72 bp GCTGTTCATTTTTCTCTAAGATGCAGTCACATAGGATaGGATCCAATCTCACAAGATTTTTGTTGTCTGCAT +
Preference number: 3 (lower is better)
Translates to: AVHFSLRCSHIG*DPISQDFCCLH
Trigger: ATGCAGACAACAAAAATCTTGTGAGATTGGATCCCATCCTATGTGACTGCATCTTAGAGAAAAATGAACAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484492.5
CDS-3UTR TCA 90 bp TCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCAGGCTGTCGTCCTTCGGGGCTaGGGCAGACCAGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SLSSQWALVREGSLDRQAVVLRG*GRPAGG
Trigger: GCCCCCTGCTGGTCTGCCTCAGCCCCGAAGGACGAC...AGCCTGCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613435.1
CDS-3UTR TCA 90 bp ATGGGTGTGGCAGGCCGGCCCCTTCAGCAAAAGATGCCGTCCCATGGTGGCTACATGGTCACTTCTCCATaGGGCACAGCAGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: MGVAGRPLQQKMPSHGGYMVTSP*GTAGIV
Trigger: CACGATGCCTGCTGTGCCTCATGGAGAAGTGACCAT...GTAGCCACCATGGGACGGCATCTTTTGCTGAAGGGGCCGGCCTGCCACACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR GCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGCCGTGGGGGCAGCCATaGTGGGGCCCGGCCGCGAAA +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPREPWGQP*WGPAAK
Trigger: TTTCGCGGCCGGGCCCCAGCATGGCTGCCCCCACGG...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR TCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTTCGCCCTTCTGTACCTaGGGCAGACCAGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESSPFCT*GRPAGG
Trigger: GCCCCCTGCTGGTCTGCCTCAGGTACAGAAGGGCGA...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp GCCTGGGATGGGGTATTGGGATCCACTCACTCACCTACCCACCGTCCATCCTTAGGAGATGGCCAGAGCTaGTTGCCCTTGGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: AWDGVLGSTHSPTHRPSLGDGQS*LPLGGL
Trigger: CAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCC...TAAGGATGGACGGTGGGTAGGTGAGTGAGTGGATCCCAATACCCCATCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR TCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCGCCCTTCTGTACCTaGGGCAGACCAGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKESPFCT*GRPAGG
Trigger: GCCCCCTGCTGGTCTGCCTCAGGTACAGAAGGGCGA...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp GTGGGAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTCTGCAACAGAATCAAGGTATGGCCAGAGCTGCTTaGCCTTGGGTGGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: VGDGQSCLPLGGLQQNQGMARAA*PWVVCN
Trigger: GTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCAT...ACCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CCA 90 bp CTCCGGCAAGTGGGAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTCTGCAACAGGATGCCGTCCCATGGTaGCTACATGGTGAATTGAGA +
Preference number: 4 (lower is better)
Translates to: LRQVGDGQSCLPLGGLQQDAVPW*LHGELR
Trigger: TCTCAATTCACCATGTAGCCACCATGGGACGGCATC...CTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR TCA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGTGGCCGTGTTGGACTTaGCCCGAAAGGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLWPCWT*PERPWQ
Trigger: TTGCCAAGGCCTTTCGGGTCAAGTCCAACACGGCCA...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR TCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGGCCTGGCATCGCTGCTaGAGGATGGCAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKEAWHRC*RMAATE
Trigger: CTCAGTGGCTGCCATCCTTCAGCAGCGATGCCAGGC...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGCCCTCCTGGATAGTCTaGGAGGTCGGGGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPREPSWIV*EVGEGS
Trigger: CGAGCCCTCCCCGACCTCCCAGACTATCCAGGAGGG...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTTCCCTGCTACCCTCCTaGATAGTCTGGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESSLLPS*IVWEVG
Trigger: CCCGACCTCCCAGACTATCCAGGAGGGTAGCAGGGA...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp AATTTCTCCGGCAAGTGGGAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTCTGCTCCCTTTCTTCACAATaGGCTCTTGTCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: NFSGKWEMARAACPWVVCSLSSQ*ALVREG
Trigger: CCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGA...GCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTCCGAGGTGGTGGACCTaGTTTCCCTGGATCTGCACC +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESPRWWT*FPWICT
Trigger: GGTGCAGATCCAGGGAAACCAGGTCCACCACCTCGG...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
3UTR CAA 72 bp CTCCGGCAAGTGGGAGATGGCCAGAGCTGCTTGCCCTaGGGTGGTCTGCAACAGAATCAAGGTTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LRQVGDGQSCLP*GGLQQNQGSVP
Trigger: TGGAACTGAACCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CAA 72 bp AGAGAGCTTAGGAGAGAGTTGGCCTGGGATGGGGTATaGGGATCCACTCACTCACCTACCCACCGTCCATCC +
Preference number: 4 (lower is better)
Translates to: RELRRELAWDGV*GSTHSPTHRPS
Trigger: GGATGGACGGTGGGTAGGTGAGTGAGTGGATCCCAATACCCCATCCCAGGCCAACTCTCTCCTAAGCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR TCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTTGGCCGTGTTGGACTTaGCCCGAAAGGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESWPCWT*PERPWQ
Trigger: TTGCCAAGGCCTTTCGGGTCAAGTCCAACACGGCCA...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTTCGTTCGGACCTCACTaGCCTCCAGAAAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESSFGPH*PPESSP
Trigger: AGGGGAGCTTTCTGGAGGGCAGTGAGGTCCGAACGA...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTACATGTCTGCTGGGGTaGCCTGGGGAAGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESTCLLG*PGEEST
Trigger: TGTGCTCTCTTCCCCAGGCCACCCCAGCAGACATGT...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAACCCTCCTGGATAGTCTaGGAGGTCGGGGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKPSWIV*EVGEGS
Trigger: CGAGCCCTCCCCGACCTCCCAGACTATCCAGGAGGG...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTTCCCTGCTACCCTCCTaGATAGTCTGGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSSLLPS*IVWEVG
Trigger: CCCGACCTCCCAGACTATCCAGGAGGGTAGCAGGGA...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGCAGGGTCATGCTGGCTaGGACACAGTAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLQGHAG*DTVEGF
Trigger: AAACCCCTCTACTGTGTCCCAGCCAGCATGACCCTG...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTAGAGCAGGGTCATGCTaGCTGGGACACAGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESRAGSC*LGHSRG
Trigger: CCCTCTACTGTGTCCCAGCCAGCATGACCCTGCTCT...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGTTGTGGCCAGACTCCTaGAAGAGCAGGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLLWPDS*KSRVML
Trigger: CAGCATGACCCTGCTCTTCCAGGAGTCTGGCCACAA...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGCCGAGGTGGTGGACCTaGTTTCCCTGGATCTGCACC +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKEPRWWT*FPWICT
Trigger: GGTGCAGATCCAGGGAAACCAGGTCCACCACCTCGG...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGAGCCAGCCGAGGTGGTaGACCTGGTTTCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKESQPRW*TWFPWI
Trigger: GATCCAGGGAAACCAGGTCCACCACCTCGGCTGGCT...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp TCTCCGGCAAGTGGGAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTCTGCAACATCCAGAGACAGGCTTTaGTTTAACAGCTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: SPASGRWPELLALGWSATSRDRL*FNSCSS
Trigger: GGATGAGCAGCTGTTAAACCAAAGCCTGTCTCTGGA...TGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CCA 90 bp GAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTCTGCAACAGAATCAAGGTTCAGAGGAGAGAGTTGGCCTaGGATGGGGTATTGGGATCC +
Preference number: 4 (lower is better)
Translates to: EMARAACPWVVCNRIKVQRRELA*DGVLGS
Trigger: GGATCCCAATACCCCATCCCAGGCCAACTCTCTCCT...CTGAACCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR TCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGCCTTCAGGCCTGACGTaGGCATCTCAGCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKEPSGLT*ASQLWT
Trigger: TGTCCACAGCTGAGATGCTCACGTCAGGCCTGAAGG...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR TCA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGACCCCTTCTCTTCACTaGGATCTGCTGAATCCAGGG +
Preference number: 4 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLTPSLH*DLLNPG
Trigger: CCCTGGATTCAGCAGATCTCAGTGAAGAGAAGGGGT...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR TCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTTCTTCACGTGCCTGGTaGACCTCCCCATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESSSRAW*TSPFSS
Trigger: AGAGGAGAATGGGGAGGTTCACCAGGCACGTGAAGA...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR TCA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGAAGGATGGCAGCCACTaGGTATGGGTCCAGACCATA +
Preference number: 4 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLKDGSH*VWVQTI
Trigger: TATGGTCTGGACCCATACTCAGTGGCTGCCATCCTT...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR TCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGCCTGGCATCGCTGCTaGAGGATGGCAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKAWHRC*RMAATE
Trigger: CTCAGTGGCTGCCATCCTTCAGCAGCGATGCCAGGC...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGGGTTCAGGCCCCTGGTaGTGGTGTCTTCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPREGSGPW*WCLLGL
Trigger: AAGCCCCAGAAGACACCAGCACCAGGGGCCTGAACC...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR GCA 90 bp GATTCTCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCTCGTTCGGACCTCACTaGCCTCCAGAAAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: DSPFLHNGLLSGKGHLIGSFGPH*PPESSP
Trigger: AGGGGAGCTTTCTGGAGGGCAGTGAGGTCCGAACGA...GCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR CCA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTACATGTCTGCTGGGGTaGCCTGGGGAAGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSTCLLG*PGEEST
Trigger: TGTGCTCTCTTCCCCAGGCCACCCCAGCAGACATGT...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGCTTGGTTCAGGCCCCTaGTGCTGGTGTCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPRELGSGP*CWCLLG
Trigger: CCCCAGAAGACACCAGCACCAGGGGCCTGAACCAAG...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR CCA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGCAGCAGGAGAACATGTaGCTGCCAAGGAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLQQENM*LPRKVL
Trigger: CAGCACTTTCCTTGGCAGCCACATGTTCTCCTGCTG...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR CCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTTTGTGGCCAGACTCCTaGAAGAGCAGGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESLWPDS*KSRVML
Trigger: CAGCATGACCCTGCTCTTCCAGGAGTCTGGCCACAA...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTAATAGCCAGCCGAGGTaGTGGACCTGGTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSNSQPR*WTWFPW
Trigger: CCAGGGAAACCAGGTCCACCACCTCGGCTGGCTATT...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR TCA 90 bp TCTCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCAGGCAAGGAAAGTGCTGGTaGGTAAAGGGAGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SPFLHNGLLSGKGHLIGRQGKCW*VKGGQP
Trigger: AGGCTGACCTCCCTTTACTCACCAGCACTTTCCTTG...CCTGCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484492.5
CDS-3UTR TCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTACCGGATCCACCACGTaGGACAAAAGAGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESTGSTT*DKRVCH
Trigger: GTGACAGACTCTTTTGTCTCACGTGGTGGATCCGGT...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGTGCCTCATGTCTCCCTaGAGGGTGGAGTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPRECLMSP*RVESIW
Trigger: CCAGATGGACTCCACCCTGCAGGGAGACATGAGGCA...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR GCA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGAGACTTGTCTTCACGTaGCTGGTGAACCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLRLVFT*LVNLPI
Trigger: AATGGGGAGGTTCACCAGGCACGTGAAGACAAGTCT...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR GCA 90 bp GGTCTGGGACTGAACAGCTGGAAAGTATGGTCACTTCTCCATGAGGCACAGCAGCCCTTCAGCAAAAGATaGCGTCCCATGGTGGCTACA +
Preference number: 4 (lower is better)
Translates to: GLGLNSWKVWSLLHEAQQPFSKR*RPMVAT
Trigger: TGTAGCCACCATGGGACGGCATCTTTTGCTGAAGGG...CTGCTGTGCCTCATGGAGAAGTGACCATACTTTCCAGCTGTTCAGTCCCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CCA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGCCAGTTCAAAGAGGATaGGGTTACCACCACTCACGT +
Preference number: 4 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLPVQRG*GYHHSR
Trigger: ACGTGAGTGGTGGTAACCCCATCCTCTTTGAACTGG...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTGGCTGCAACTCCAATaGCTACAGGGGCTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKEWLQLQ*LQGLCS
Trigger: GGAACAGAGCCCCTGTAGCCATTGGAGTTGCAGCCA...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGTCTCAGCTGTGGACATaGCTGCAACTCCAATGGCTA +
Preference number: 4 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLSQLWT*LQLQWL
Trigger: TAGCCATTGGAGTTGCAGCCATGTCCACAGCTGAGA...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGCTATCTGTGGAGTCTTaGTTCAGGCCCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKELSVES*FRPLVL
Trigger: CAGCACCAGGGGCCTGAACCAAGACTCCACAGATAG...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR CCA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTAAGCTCCCCTTCTTGTaGCCAGACTCCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSKLPFL*PDSWKS
Trigger: GCTCTTCCAGGAGTCTGGCCACAAGAAGGGGAGCTT...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGAATAGCCAGCCGAGGTaGTGGACCTGGTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPRENSQPR*WTWFPW
Trigger: CCAGGGAAACCAGGTCCACCACCTCGGCTGGCTATT...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTACCAGCCCAGAGCTTaGATTTCCACCGGATCCACC +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKEYQPRA*ISTGST
Trigger: GGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTA...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp GGGAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTCTGCAACAGAATCAAGGTTCAAAGATGCCGTCCCATaGTGGCTACATGGTGAATTG +
Preference number: 4 (lower is better)
Translates to: GRWPELLALGWSATESRFKDAVP*WLHGEL
Trigger: CAATTCACCATGTAGCCACCATGGGACGGCATCTTT...GAACCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CCA 90 bp CTGGGATGGGGTATTGGGATCCACTCACTCACCTACCCACCGTCCATCCTTAATAATTTCTCCGGCAAGTaGGAGATGGCCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGWGIGIHSLTYPPSILNNFSGK*EMARAA
Trigger: AGCAGCTCTGGCCATCTCCCACTTGCCGGAGAAATT...ATTAAGGATGGACGGTGGGTAGGTGAGTGAGTGGATCCCAATACCCCATCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CCA 90 bp ACAGCTGGAAAGTATGGTCACTTCTCCATGAGGCACAGCAGGCATCGTGCCACACCTGGGATGGGGTATTaGGATCCACTCACTCACCTA +
Preference number: 4 (lower is better)
Translates to: TAGKYGHFSMRHSRHRATPGMGY*DPLTHL
Trigger: TAGGTGAGTGAGTGGATCCCAATACCCCATCCCAGG...TGTGGCACGATGCCTGCTGTGCCTCATGGAGAAGTGACCATACTTTCCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR TCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGGGAGGTCAGCCTTTTTaGCTCGGCACTTCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKEGGQPF*LGTSRH
Trigger: ATGCCTTGAAGTGCCGAGTCAAAAAGGCTGACCTCC...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR TCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGCAAGGAAAGTGCTGGTaGGTAAAGGGAGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKEQGKCW*VKGGQP
Trigger: AGGCTGACCTCCCTTTACTCACCAGCACTTTCCTTG...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR TCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGACCGGATCCACCACGTaGGACAAAAGAGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKETGSTT*DKRVCH
Trigger: GTGACAGACTCTTTTGTCTCACGTGGTGGATCCGGT...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR TCA 90 bp CTGCAGTACTCTGGTTCAGGGTGGTCTGGGACTGAACAGCTGGAAAGTATGGTCATGGTGGCTACATGGTaGATTGAGAAGAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: LQYSGSGWSGTEQLESMVMVATW*IEKSMG
Trigger: GCCCATGCTCTTCTCAATTCACCATGTAGCCACCAT...GACCATACTTTCCAGCTGTTCAGTCCCAGACCACCCTGAACCAGAGTACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR TCA 90 bp TTCAGTTCCAGAGACAGGCTTTGGTTTAACAGCTGCTCATCCCAGCCCCGCAGCAGCACAGAGTTTCAGTaGTCATTATGGGTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FSSRDRLWFNSCSSQPRSSTEFQ*SLWVWQ
Trigger: CTGCCACACCCATAATGATCACTGAAACTCTGTGCT...GCTGCGGGGCTGGGATGAGCAGCTGTTAAACCAAAGCCTGTCTCTGGAACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR GCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAACTTGGCAAACATGTCTaGTGGGGTGGCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKLGKHV*WGGLGK
Trigger: CTTCCCCAGGCCACCCCAGCAGACATGTTTGCCAAG...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTAGCTGTGGACATGGCTaGAACTCCAATGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSSCGHG*NSNGYR
Trigger: CCTGTAGCCATTGGAGTTGCAGCCATGTCCACAGCT...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTGCTCTCCACCCCTTTaGTCAGCTCCTTCACCTGTA +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKECSPPL*SAPSPV
Trigger: TACAGGTGAAGGAGCTGAGCAAAGGGGTGGAGAGCA...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp TCCAAACACCTGGTCAGAAGACTGTCCCATGGAAGCTTCATGACTGTATGCTGTTCGTTCGGACCTCACTaGCCTCCAGAAAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SKHLVRRLSHGSFMTVCCSFGPH*PPESSP
Trigger: AGGGGAGCTTTCTGGAGGGCAGTGAGGTCCGAACGA...ACAGCATACAGTCATGAAGCTTCCATGGGACAGTCTTCTGACCAGGTGTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR CCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCCCCACCAAAGAAATaGCACAGAGGTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKESPPKK*HRGRPS
Trigger: AGAAGGGCGACCTCTGTGCCATTTCTTTGGTGGGGA...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGCAGGGTCATGCTGGCTaGGACACAGTAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPREQGHAG*DTVEGF
Trigger: AAACCCCTCTACTGTGTCCCAGCCAGCATGACCCTG...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTTCCCTTTCTTCACAATaGGCTCTTGTCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSSLSSQ*ALVREG
Trigger: CCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGA...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGATCGCTGCTGAAGGATaGCAGCCACTGAGTATGGGT +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKEIAAEG*QPLSMG
Trigger: ACCCATACTCAGTGGCTGCCATCCTTCAGCAGCGAT...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CTCCGGCAAGTGGGAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTCTGCAACAGGAATACTCTCTAAATTaGCCTGAAAGAACTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LRQVGDGQSCLPLGGLQQEYSLN*PERTER
Trigger: TCTCTCAGTTCTTTCAGGCCAATTTAGAGAGTATTC...CTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR TCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGGTCTTCTGGGGCTTCTaGGAGAGACTTGTCTTCACG +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPREVFWGF*ERLVFT
Trigger: CGTGAAGACAAGTCTCTCTCAGAAGCCCCAGAAGAC...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR TCA 90 bp TCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCAGGCTGTAATTGGAGGTCAGCCTTTTTaGCTCGGCACTTCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SSQWALVREGSLDRQAVIGGQPF*LGTSRH
Trigger: ATGCCTTGAAGTGCCGAGTCAAAAAGGCTGACCTCC...AATTACAGCCTGCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484492.5
CDS-3UTR TCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGAAGGATGGCAGCCACTaGGTATGGGTCCAGACCATA +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPREKDGSH*VWVQTI
Trigger: TATGGTCTGGACCCATACTCAGTGGCTGCCATCCTT...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR TCA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGTGTTTTCGAGGGAGCTaGTACTCTTCAAGCAATAGC +
Preference number: 4 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLCFRGS*YSSSNS
Trigger: GCTATTGCTTGAAGAGTATCAGCTCCCTCGAAAACA...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR TCA 90 bp GAGATGGCCAGAGCTGCTTGCCCTTGGGTGGTCTGCAACAGAATCAAGGTTCAGGGCCTTAGATGGATTTaGTTCCAGTTCCTACTTAGC +
Preference number: 4 (lower is better)
Translates to: EMARAACPWVVCNRIKVQGLRWI*FQFLLS
Trigger: GCTAAGTAGGAACTGGAATCAAATCCATCTAAGGCC...CTGAACCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR GCA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGTTCACCTGTATAATCTaGTCCTGCTGCATTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLFTCII*SCCICC
Trigger: GCAGCAAATGCAGCAGGAGCAGATTATACAGGTGAA...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGAGTCCACAGCCACAATaGTCTCCACCCCTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPRESPQPQ*SPPLCS
Trigger: TGAGCAAAGGGGTGGAGAGCATTGTGGCTGTGGACT...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGTCCCCACCAAAGAAATaGCACAGAGGTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPRESPPKK*HRGRPS
Trigger: AGAAGGGCGACCTCTGTGCCATTTCTTTGGTGGGGA...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAATGGCTGCAACTCCAATaGCTACAGGGGCTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKWLQLQ*LQGLCS
Trigger: GGAACAGAGCCCCTGTAGCCATTGGAGTTGCAGCCA...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGAGGGTGGAGTCCATCTaGACAGACCCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPRERVESI*TDPFSS
Trigger: TGAAGAGAAGGGGTCTGTCCAGATGGACTCCACCCT...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR CCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGGCGTTTTGCTATCTGTaGAGTCTTGGTTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPREAFCYL*SLGSGP
Trigger: GGGGCCTGAACCAAGACTCCACAGATAGCAAAACGC...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR CCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAAAGCTCCCCTTCTTGTaGCCAGACTCCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKKLPFL*PDSWKS
Trigger: GCTCTTCCAGGAGTCTGGCCACAAGAAGGGGAGCTT...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp TTGGACAGATTCTCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTTCCCTTTCTTCACAATaGGCTCTTGTCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LDRFSLSSQWALVREGSLSLSSQ*ALVREG
Trigger: CCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGA...AAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGAGAATCTGTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR CCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAATACCAGCCCAGAGCTTaGATTTCCACCGGATCCACC +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKYQPRA*ISTGST
Trigger: GGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTA...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR TCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTACAACTTCACAATGTTaGGCTCCTCCTTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESTTSQC*APPFQV
Trigger: TACCTGGAAAGGAGGAGCTCAACATTGTGAAGTTGT...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR TCA 90 bp TCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCAGGCTCTCTTTGTGCTAGGGTaGTGTCAATTGGACAGATTC +
Preference number: 4 (lower is better)
Translates to: SLSSQWALVREGSLDRQALFVLG*CQLDRF
Trigger: GAATCTGTCCAATTGACATCACCCTAGCACAAAGAG...AGCCTGCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR TCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTTCTTGCCAGGTTTaGGGGCCTTTTCTAGACCTT +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKESSCQV*GPFLDL
Trigger: AAGGTCTAGAAAAGGCCCTCAAACCTGGCAAGAAGA...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTTCCTGCTGCATTTGCTaGAGGAACTTAGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESSCCIC*RNLESF
Trigger: AAAGCTCTCTAAGTTCCTGCAGCAAATGCAGCAGGA...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTTGTATAATCTGCTCCTaGTGCATTTGCTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESCIICS*CICCRN
Trigger: GTTCCTGCAGCAAATGCAGCAGGAGCAGATTATACA...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAAGTCCACAGCCACAATaGTCTCCACCCCTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKSPQPQ*SPPLCS
Trigger: TGAGCAAAGGGGTGGAGAGCATTGTGGCTGTGGACT...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGTCTCAGCTGTGGACATaGCTGCAACTCCAATGGCTA +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPRESQLWT*LQLQWL
Trigger: TAGCCATTGGAGTTGCAGCCATGTCCACAGCTGAGA...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTTGGAGCAATGGAAGGTaGAGAGGACTTGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSWSNGR*RGLVSR
Trigger: TCTGGAAACAAGTCCTCTCCACCTTCCATTGCTCCA...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR CCA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGTGCAGTCACATAGGATaGGATCCAATCTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLCSHIG*DPISQD
Trigger: ATCTTGTGAGATTGGATCCCATCCTATGTGACTGCA...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAATCCCTTTCTTCACAATaGGCTCTTGTCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKSLSSQ*ALVREG
Trigger: CCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGA...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGGCCTTTTCTAGACCTTaGATGTGTTTTCGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKEAFSRP*MCFRGS
Trigger: GCTCCCTCGAAAACACATCCAAGGTCTAGAAAAGGC...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp ATCGTGCCACAGGCACACACGACTTTAGAGGTCCACAAAAACGTTTTAATTTCTCCGGCAAGTGGGAGATaGCCAGAGCTGCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: IVPQAHTTLEVHKNVLISPASGR*PELLAL
Trigger: AAGGGCAAGCAGCTCTGGCCATCTCCCACTTGCCGG...AGAAATTAAAACGTTTTTGTGGACCTCTAAAGTCGTGTGTGCCTGTGGCACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CCA 90 bp GATGCCGTCCCATGGTGGCTACATGGTGAATTGAGAAGAGCATGGGCCTTAGATCTGGGACTGAACAGCTaGAAAGTATGGTCACTTCTC +
Preference number: 4 (lower is better)
Translates to: DAVPWWLHGELRRAWALDLGLNS*KVWSLL
Trigger: GAGAAGTGACCATACTTTCCAGCTGTTCAGTCCCAG...ATCTAAGGCCCATGCTCTTCTCAATTCACCATGTAGCCACCATGGGACGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR TCA 90 bp GATGCCGTCCCATGGTGGCTACATGGTGAATTGAGAAGAGCATGGGCCTTAGATCTCTTTGTGCTAGGGTaGTGTCAATTGGACAGATTC +
Preference number: 4 (lower is better)
Translates to: DAVPWWLHGELRRAWALDLFVLG*CQLDRF
Trigger: GAATCTGTCCAATTGACATCACCCTAGCACAAAGAG...ATCTAAGGCCCATGCTCTTCTCAATTCACCATGTAGCCACCATGGGACGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR TCA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTTGTTTTCGAGGGAGCTaGTACTCTTCAAGCAATAGC +
Preference number: 4 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSCFRGS*YSSSNS
Trigger: GCTATTGCTTGAAGAGTATCAGCTCCCTCGAAAACA...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTTGTATAATCTGCTCCTaGTGCATTTGCTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSCIICS*CICCRN
Trigger: GTTCCTGCAGCAAATGCAGCAGGAGCAGATTATACA...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp CAGGCACACACGACTTTAGAGGTCCACAAAAACGTTTTAATTTCTCCGGCAAGTCTTTGGTTTAACAGCTaGTCATCCCAGCCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QAHTTLEVHKNVLISPASLWFNS*SSQPRS
Trigger: GCTGCGGGGCTGGGATGAGCAGCTGTTAAACCAAAG...ACTTGCCGGAGAAATTAAAACGTTTTTGTGGACCTCTAAAGTCGTGTGTGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAACCAGTTCAAAGAGGATaGGGTTACCACCACTCACGT +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKPVQRG*GYHHSR
Trigger: ACGTGAGTGGTGGTAACCCCATCCTCTTTGAACTGG...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp GACGCTCTTTGTGCTAGGGTGATGTCAATTGGACAGATTCTCCCTTTCTTCACACAGCAGGAGAACATGTaGCTGCCAAGGAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: DALCARVMSIGQILPFFTQQENM*LPRKVL
Trigger: CAGCACTTTCCTTGGCAGCCACATGTTCTCCTGCTG...TGTGAAGAAAGGGAGAATCTGTCCAATTGACATCACCCTAGCACAAAGAGCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484492.5
CDS-3UTR CCA 90 bp TCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCAGGCTTGCAGTCACATAGGATaGGATCCAATCTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: SLSSQWALVREGSLDRQACSHIG*DPISQD
Trigger: ATCTTGTGAGATTGGATCCCATCCTATGTGACTGCA...AGCCTGCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR CCA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCAGAAGACTGTCCCATaGAAGCTTCATGACTGTATG +
Preference number: 4 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSQKTVP*KLHDCM
Trigger: CATACAGTCATGAAGCTTCCATGGGACAGTCTTCTG...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp TCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCAGGCTATTTTTCCAAACACCTaGTCAGAAGACTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: SLSSQWALVREGSLDRQAIFPNT*SEDCPM
Trigger: CATGGGACAGTCTTCTGACCAGGTGTTTGGAAAAAT...AGCCTGCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR CCA 90 bp GGTGGTCTGCAACAGAATCAAGGTTCAGTTCCAGAGACAGGCTTTGGTTTAACACTGCTTGCCCTTGGGTaGTCTGCAACAGAATCAAGG +
Preference number: 4 (lower is better)
Translates to: GGLQQNQGSVPETGFGLTLLALG*SATESR
Trigger: CCTTGATTCTGTTGCAGACCACCCAAGGGCAAGCAG...TGTTAAACCAAAGCCTGTCTCTGGAACTGAACCTTGATTCTGTTGCAGACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CCA 90 bp TCTGCAACAGAATCAAGGTTCAGTTCCAGAGACAGGCTTTGGTTTAACAGCTGCAACTCTGCAGTACTCTaGTTCAGGGTGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SATESRFSSRDRLWFNSCNSAVL*FRVVWD
Trigger: GTCCCAGACCACCCTGAACCAGAGTACTGCAGAGTT...GCAGCTGTTAAACCAAAGCCTGTCTCTGGAACTGAACCTTGATTCTGTTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CCA 90 bp TCTGCAACAGAATCAAGGTTCAGTTCCAGAGACAGGCTTTGGTTTAACAGCTGCAGAGTTGGCCTGGGATaGGGTATTGGGATCCACTCA +
Preference number: 4 (lower is better)
Translates to: SATESRFSSRDRLWFNSCRVGLG*GIGIHS
Trigger: TGAGTGGATCCCAATACCCCATCCCAGGCCAACTCT...GCAGCTGTTAAACCAAAGCCTGTCTCTGGAACTGAACCTTGATTCTGTTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
3UTR CAA 72 bp GCAAAAGATGCCGTCCCATGGTGGCTACATGGTGAATaGAGAAGAGCATGGGCCTTAGATGGATTTGATTCC +
Preference number: 4 (lower is better)
Translates to: AKDAVPWWLHGE*RRAWALDGFDS
Trigger: GGAATCAAATCCATCTAAGGCCCATGCTCTTCTCAATTCACCATGTAGCCACCATGGGACGGCATCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR TCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAACTTCACAATGTTaGGCTCCTCCTTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPRETTSQC*APPFQV
Trigger: TACCTGGAAAGGAGGAGCTCAACATTGTGAAGTTGT...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR TCA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTTCATCCATTTGTTCTTaGAGCGTTTTGCTATCTGTG +
Preference number: 4 (lower is better)
Translates to: TSPELGFPPDPPRETKESSSICS*SVLLSV
Trigger: CACAGATAGCAAAACGCTTCAAGAACAAATGGATGA...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR TCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGCTCTTTGTGCTAGGGTaGTGTCAATTGGACAGATTC +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPRELFVLG*CQLDRF
Trigger: GAATCTGTCCAATTGACATCACCCTAGCACAAAGAG...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR TCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAATCTTCTTGCCAGGTTTaGGGGCCTTTTCTAGACCTT +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKSSCQV*GPFLDL
Trigger: AAGGTCTAGAAAAGGCCCTCAAACCTGGCAAGAAGA...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTGTTCTTGAAGCGTTTTaGTATCTGTGGAGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSVLEAF*YLWSLG
Trigger: ACCAAGACTCCACAGATAGCAAAACGCTTCAAGAAC...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR CCA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGCAGCGTGTACACTGTTaGATACAGATTTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ITSPELGFPPDPPRETKEQRVHC*IQIFLQ
Trigger: CTGGAGAAAAATCTGTATCCAACAGTGTACACGCTG...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp TCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCAGGCTGTAATTCAGAAGACTGTCCCATaGAAGCTTCATGACTGTATG +
Preference number: 4 (lower is better)
Translates to: SSQWALVREGSLDRQAVIQKTVP*KLHDCM
Trigger: CATACAGTCATGAAGCTTCCATGGGACAGTCTTCTG...AATTACAGCCTGCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR CCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGCCTTTTCTAGACCTTaGATGTGTTTTCGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKAFSRP*MCFRGS
Trigger: GCTCCCTCGAAAACACATCCAAGGTCTAGAAAAGGC...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp ACAGCTGGAAAGTATGGTCACTTCTCCATGAGGCACAGCAGGCATCGTGCCACAGAATTGAGAAGAGCATaGGCCTTAGATGGATTTGAT +
Preference number: 4 (lower is better)
Translates to: TAGKYGHFSMRHSRHRATELRRA*ALDGFD
Trigger: ATCAAATCCATCTAAGGCCCATGCTCTTCTCAATTC...TGTGGCACGATGCCTGCTGTGCCTCATGGAGAAGTGACCATACTTTCCAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CCA 90 bp CAGGCACACACGACTTTAGAGGTCCACAAAAACGTTTTAATTTCTCCGGCAAGTAGAGCTGCTTGCCCTTaGGTGGTCTGCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: QAHTTLEVHKNVLISPASRAACP*VVCNRI
Trigger: GATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCT...ACTTGCCGGAGAAATTAAAACGTTTTTGTGGACCTCTAAAGTCGTGTGTGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CCA 90 bp CTACATGGTGAATTGAGAAGAGCATGGGCCTTAGATGGATTTGATTCCAGTTCCAGCTTAGGAGAGAGTTaGCCTGGGATGGGGTATTGG +
Preference number: 4 (lower is better)
Translates to: LHGELRRAWALDGFDSSSSLGES*PGMGYW
Trigger: CCAATACCCCATCCCAGGCCAACTCTCTCCTAAGCT...GGAACTGGAATCAAATCCATCTAAGGCCCATGCTCTTCTCAATTCACCATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR TCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAACTGCATCCCCTTTGTaGGCATACAACTTCACAATG +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKTASPL*AYNFTM
Trigger: CATTGTGAAGTTGTATGCTCACAAAGGGGATGCAGT...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR TCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAACTCTTTGTGCTAGGGTaGTGTCAATTGGACAGATTC +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKLFVLG*CQLDRF
Trigger: GAATCTGTCCAATTGACATCACCCTAGCACAAAGAG...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAATCCTGCTGCATTTGCTaGAGGAACTTAGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKSCCIC*RNLESF
Trigger: AAAGCTCTCTAAGTTCCTGCAGCAAATGCAGCAGGA...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR GCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAATTCACCTGTATAATCTaGTCCTGCTGCATTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKFTCII*SCCICC
Trigger: GCAGCAAATGCAGCAGGAGCAGATTATACAGGTGAA...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGTGCAGTCACATAGGATaGGATCCAATCTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPRECSHIG*DPISQD
Trigger: ATCTTGTGAGATTGGATCCCATCCTATGTGACTGCA...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAACAGAAGACTGTCCCATaGAAGCTTCATGACTGTATG +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKQKTVP*KLHDCM
Trigger: CATACAGTCATGAAGCTTCCATGGGACAGTCTTCTG...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGATTTTTCCAAACACCTaGTCAGAAGACTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPREIFPNT*SEDCPM
Trigger: CATGGGACAGTCTTCTGACCAGGTGTTTGGAAAAAT...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp TCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCAGGCTGTAATTATTTTTCCAAACACCTaGTCAGAAGACTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: SSQWALVREGSLDRQAVIIFPNT*SEDCPM
Trigger: CATGGGACAGTCTTCTGACCAGGTGTTTGGAAAAAT...AATTACAGCCTGCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR GCA 90 bp TGGACAGATTCTCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGCATTTTTCTCTAAGATaGAGTCACATAGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: WTDSPFLHNGLLSGKGHLHFSLR*SHIGWD
Trigger: ATCCCATCCTATGTGACTGCATCTTAGAGAAAAATG...CAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGAGAATCTGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR GCA 90 bp CTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCAGGCTGTACATTTTTCTCTAAGATaGAGTCACATAGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: LSSQWALVREGSLDRQAVHFSLR*SHIGWD
Trigger: ATCCCATCCTATGTGACTGCATCTTAGAGAAAAATG...TACAGCCTGCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR CCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAATTTTTCCAAACACCTaGTCAGAAGACTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKIFPNT*SEDCPM
Trigger: CATGGGACAGTCTTCTGACCAGGTGTTTGGAAAAAT...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp TCTGCAACAGAATCAAGGTTCAGTTCCAGAGACAGGCTTTGGTTTAACAGCTGCAACAGCTGGAAAGTATaGTCACTTCTCCATGAGGCA +
Preference number: 4 (lower is better)
Translates to: SATESRFSSRDRLWFNSCNSWKV*SLLHEA
Trigger: TGCCTCATGGAGAAGTGACCATACTTTCCAGCTGTT...GCAGCTGTTAAACCAAAGCCTGTCTCTGGAACTGAACCTTGATTCTGTTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR GCA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGCATGTAAGAAGCATTaGTGTAACAGCTCATCCATT +
Preference number: 4 (lower is better)
Translates to: KITSPELGFPPDPPRETKACKKH*CNSSSI
Trigger: AATGGATGAGCTGTTACAGCAATGCTTCTTACATGC...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR GCA 90 bp TCCAAACACCTGGTCAGAAGACTGTCCCATGGAAGCTTCATGACTGTATGCTGTGCATGTAAGAAGCATTaGTGTAACAGCTCATCCATT +
Preference number: 4 (lower is better)
Translates to: SKHLVRRLSHGSFMTVCCACKKH*CNSSSI
Trigger: AATGGATGAGCTGTTACAGCAATGCTTCTTACATGC...ACAGCATACAGTCATGAAGCTTCCATGGGACAGTCTTCTGACCAGGTGTTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484492.5
CDS-3UTR GCA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGCATTTTTCTCTAAGATaGAGTCACATAGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: LIKITSPELGFPPDPPREHFSLR*SHIGWD
Trigger: ATCCCATCCTATGTGACTGCATCTTAGAGAAAAATG...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CCA 90 bp TTCTCTAAGATGCAGTCACATAGGATGGGATCCAATCTCACAAGATTTTTGTTGTCCCTTTCTTCACAATaGGCTCTTGTCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FSKMQSHRMGSNLTRFLLSLSSQ*ALVREG
Trigger: CCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGA...CAACAAAAATCTTGTGAGATTGGATCCCATCCTATGTGACTGCATCTTAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484492.5
CDS-3UTR CCA 90 bp AATTTTTCCAAACACCTGGTCAGAAGACTGTCCCATGGAAGCTTCATGACTGTACAGAAGACTGTCCCATaGAAGCTTCATGACTGTATG +
Preference number: 4 (lower is better)
Translates to: NFSKHLVRRLSHGSFMTVQKTVP*KLHDCM
Trigger: CATACAGTCATGAAGCTTCCATGGGACAGTCTTCTG...TACAGTCATGAAGCTTCCATGGGACAGTCTTCTGACCAGGTGTTTGGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR TCA 90 bp AGATGCAGTCACATAGGATGGGATCCAATCTCACAAGATTTTTGTTGTCTGCATCTCTTTGTGCTAGGGTaGTGTCAATTGGACAGATTC +
Preference number: 4 (lower is better)
Translates to: RCSHIGWDPISQDFCCLHLFVLG*CQLDRF
Trigger: GAATCTGTCCAATTGACATCACCCTAGCACAAAGAG...ATGCAGACAACAAAAATCTTGTGAGATTGGATCCCATCCTATGTGACTGCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484492.5
CDS-3UTR CCA 90 bp TCTCTAAGATGCAGTCACATAGGATGGGATCCAATCTCACAAGATTTTTGTTGTTGCAGTCACATAGGATaGGATCCAATCTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: SLRCSHIGWDPISQDFCCCSHIG*DPISQD
Trigger: ATCTTGTGAGATTGGATCCCATCCTATGTGACTGCA...ACAACAAAAATCTTGTGAGATTGGATCCCATCCTATGTGACTGCATCTTAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484492.5
CDS CCA 90 bp CCTCCAAAGTTGCAACAGCAAACTCACACTGTGGGCAGCCAGGCCTaGAGTGGGGCCCAGCAAGCCGCATCCTGGGGTCAGGTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: PPKLQQQTHTVGSQA*SGAQQAASWGQVWP
Trigger: TGGCCAGACCTGACCCCAGGATGCGGCTTGCTGGGCCCCACTCCAGGCCTGGCTGCCCACAGTGTGAGTTTGCTGTTGCAACTTTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS GCA 90 bp CCTGACAAAGAGGCTGCCCTGGGACACTTCCTGCAGAGGACACGCTaGCCGATTTGTGAGGTTGCCCAGAACCCCCACGGCAGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: PDKEAALGHFLQRTR*PICEVAQNPHGRGS
Trigger: ACTGCCTCTGCCGTGGGGGTTCTGGGCAACCTCACAAATCGGGCAGCGTGTCCTCTGCAGGAAGTGTCCCAGGGCAGCCTCTTTGTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS TCA 90 bp GACGGTGGTGCTAGCCTGGCATCGCTGCTGAAGGATGGCAGCCACTaGGTATGGGTCCAGACCATAGGCCTCCAAGTTCCGGACCACGGT +
Preference number: 5 (lower is better)
Translates to: DGGASLASLLKDGSH*VWVQTIGLQVPDHG
Trigger: ACCGTGGTCCGGAACTTGGAGGCCTATGGTCTGGACCCATACTCAGTGGCTGCCATCCTTCAGCAGCGATGCCAGGCTAGCACCACCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS CCA 90 bp GGCCGTGTTGGACTTGACCCGAAAGGCCTTGGCAAACATGTCTGCTaGGGTGGCCTGGGGAAGAGAGCACAGAAGCCAGGGAATGTCAAG +
Preference number: 5 (lower is better)
Translates to: GRVGLDPKGLGKHVC*GGLGKRAQKPGNVK
Trigger: CTTGACATTCCCTGGCTTCTGTGCTCTCTTCCCCAGGCCACCCCAGCAGACATGTTTGCCAAGGCCTTTCGGGTCAAGTCCAACACGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000474408.1
ENST00000620382.4
CDS CCA 90 bp TCCCTCCACTCTTTCCACAGCATGTCCCTCAACCAGTCCCTGCATTaGCCCCATCCTGTCCTACTACCAAGGAGCACACGTGAGACCCCG +
Preference number: 5 (lower is better)
Translates to: SLHSFHSMSLNQSLH*PHPVLLPRSTRETP
Trigger: CGGGGTCTCACGTGTGCTCCTTGGTAGTAGGACAGGATGGGGCCAATGCAGGGACTGGTTGAGGGACATGCTGTGGAAAGAGTGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS-3UTR CAA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGGCCCCAGGGGCAGGATaGACGGTGGTGCTAGCCTGG +
Preference number: 5 (lower is better)
Translates to: ITSPELGFPPDPPRETKEAPGAG*TVVLAW
Trigger: CCAGGCTAGCACCACCGTCAATCCTGCCCCTGGGGC...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS TCA 90 bp GTCCTGGTAAGTGTGGAGCACAGAGAAGCCCCTTCCCTTCAGGCCTaGCGTGAGCATCTCAGCTGTGGACATGGCTGCAACTCCAATGGC +
Preference number: 5 (lower is better)
Translates to: VLVSVEHREAPSLQA*REHLSCGHGCNSNG
Trigger: GCCATTGGAGTTGCAGCCATGTCCACAGCTGAGATGCTCACGTCAGGCCTGAAGGGAAGGGGCTTCTCTGTGCTCCACACTTACCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000461334.1
ENST00000620382.4
CDS TCA 90 bp CTCCCTGCAGGGTGGAGTCCATCTGGACAGACCCCTTCTCTTCACTaGGATCTGCTGAATCCAGGGCCAGTGGAGCAATGGAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: LPAGWSPSGQTPSLH*DLLNPGPVEQWKVE
Trigger: CTCCACCTTCCATTGCTCCACTGGCCCTGGATTCAGCAGATCTCAGTGAAGAGAAGGGGTCTGTCCAGATGGACTCCACCCTGCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271764.7
ENST00000437518.1
ENST00000461334.1
ENST00000617960.4
CDS GCA 90 bp CCATTCTCCTCTTCCCCCTCCAGGGTCATGTGCCTCATGTCTCCCTaGAGGGTGGAGTCCATCTGGACAGACCCCTTCTCTTCACTGAGA +
Preference number: 5 (lower is better)
Translates to: PFSSSPSRVMCLMSP*RVESIWTDPFSSLR
Trigger: TCTCAGTGAAGAGAAGGGGTCTGTCCAGATGGACTCCACCCTGCAGGGAGACATGAGGCACATGACCCTGGAGGGGGAAGAGGAGAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271764.7
ENST00000437518.1
ENST00000617960.4
CDS CCA 90 bp TCCAGGGTCATGTGCCTCATGTCTCCCTGCAGGGTGGAGTCCATCTaGACAGACCCCTTCTCTTCACTGAGATCTGCTGAATCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SRVMCLMSPCRVESI*TDPFSSLRSAESRA
Trigger: GGCCCTGGATTCAGCAGATCTCAGTGAAGAGAAGGGGTCTGTCCAGATGGACTCCACCCTGCAGGGAGACATGAGGCACATGACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271764.7
ENST00000437518.1
ENST00000617960.4
CDS-3UTR CAA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGCTCCTGTCCGACCCCTaGATGGCCGTGTTGGACTTG +
Preference number: 5 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLLLSDP*MAVLDL
Trigger: CAAGTCCAACACGGCCATCAAGGGGTCGGACAGGAG...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp TTCAGTTCCAGAGACAGGCTTTGGTTTAACAGCTGCTCATCCCAGCCCCGCAGCGATGGCCAGAGCTGCTaGCCCTTGGGTGGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: FSSRDRLWFNSCSSQPRSDGQSC*PLGGLQ
Trigger: TTGCAGACCACCCAAGGGCAAGCAGCTCTGGCCATC...GCTGCGGGGCTGGGATGAGCAGCTGTTAAACCAAAGCCTGTCTCTGGAACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS TCA 90 bp GGTAAGTGTGGAGCACAGAGAAGCCCCTTCCCTTCAGGCCTGACGTaGGCATCTCAGCTGTGGACATGGCTGCAACTCCAATGGCTACAG +
Preference number: 5 (lower is better)
Translates to: GKCGAQRSPFPSGLT*ASQLWTWLQLQWLQ
Trigger: CTGTAGCCATTGGAGTTGCAGCCATGTCCACAGCTGAGATGCTCACGTCAGGCCTGAAGGGAAGGGGCTTCTCTGTGCTCCACACTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000461334.1
ENST00000620382.4
CDS GCA 90 bp AGCCTTCCCTCCACTCTTTCCACAGCATGTCCCTCAACCAGTCCCTaGATTGGCCCCATCCTGTCCTACTACCAAGGAGCACACGTGAGA +
Preference number: 5 (lower is better)
Translates to: SLPSTLSTACPSTSP*IGPILSYYQGAHVR
Trigger: TCTCACGTGTGCTCCTTGGTAGTAGGACAGGATGGGGCCAATGCAGGGACTGGTTGAGGGACATGCTGTGGAAAGAGTGGAGGGAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS-3UTR CAA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGCCCCAGGGGCAGGATaGACGGTGGTGCTAGCCTGG +
Preference number: 5 (lower is better)
Translates to: KITSPELGFPPDPPRETKAPGAG*TVVLAW
Trigger: CCAGGCTAGCACCACCGTCAATCCTGCCCCTGGGGC...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGTTGACCCGAAAGGCCTaGGCAAACATGTCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLLTRKA*ANMSAG
Trigger: CCCAGCAGACATGTTTGCCAAGGCCTTTCGGGTCAA...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGCCCTTGATGGCCGTGTaGGACTTGACCCGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: ITSPELGFPPDPPRETKEPLMAV*DLTRKA
Trigger: GGCCTTTCGGGTCAAGTCCAACACGGCCATCAAGGG...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGGGGTGGGGAAAGCAGTaGTCACATCAGCTCGAAGCT +
Preference number: 5 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLGWGKQ*SHQLEA
Trigger: AGCTTCGAGCTGATGTGACAACTGCTTTCCCCACCC...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGTTACCAGCCCAGAGCTaGGATTTCCACCGGATCCAC +
Preference number: 5 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLLPAQS*DFHRIH
Trigger: GTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp CTGCTCATCCCAGCCCCGCAGCACAGAGTTTCAGTGATCATTATGGGTGTGGCACAGAGCTGCTTGCCCTaGGGTGGTCTGCAACAGAAT +
Preference number: 5 (lower is better)
Translates to: LLIPAPQHRVSVIIMGVAQSCLP*GGLQQN
Trigger: ATTCTGTTGCAGACCACCCAAGGGCAAGCAGCTCTG...TGCCACACCCATAATGATCACTGAAACTCTGTGCTGCGGGGCTGGGATGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CAA 90 bp GGTCTGGGACTGAACAGCTGGAAAGTATGGTCACTTCTCCATGAGGCACAGCAGGCCTGGGATGGGGTATaGGGATCCACTCACTCACCT +
Preference number: 5 (lower is better)
Translates to: GLGLNSWKVWSLLHEAQQAWDGV*GSTHSP
Trigger: AGGTGAGTGAGTGGATCCCAATACCCCATCCCAGGC...CTGCTGTGCCTCATGGAGAAGTGACCATACTTTCCAGCTGTTCAGTCCCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS CCA 90 bp GCCTCCAGCCCACATCAGTGCTTTCCATACCAGCAGGAGAACATGTaGCTGCCAAGGAAAGTGCTGGTGAGTAAAGGGAGGTCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: ASSPHQCFPYQQENM*LPRKVLVSKGRSAF
Trigger: AAAGGCTGACCTCCCTTTACTCACCAGCACTTTCCTTGGCAGCCACATGTTCTCCTGCTGGTATGGAAAGCACTGATGTGGGCTGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 90 bp CAGGCCTGGAGTGGGGCCCAGCAAGCCGCATCCTGGGGTCAGGTCTaGCCAACTAATTATCTACTGTCTATGGTCACATTAGTGCTACAA +
Preference number: 5 (lower is better)
Translates to: QAWSGAQQAASWGQV*PTNYLLSMVTLVLQ
Trigger: TTGTAGCACTAATGTGACCATAGACAGTAGATAATTAGTTGGCCAGACCTGACCCCAGGATGCGGCTTGCTGGGCCCCACTCCAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS-3UTR CAA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTGCTATCTGTGGAGTCTaGGTTCAGGCCCCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSAICGV*VQAPGA
Trigger: AGCACCAGGGGCCTGAACCAAGACTCCACAGATAGC...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR CAA 90 bp TCTCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCAGGGGGAGGTCAGCCTTTTaGACTCGGCACTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: SPFLHNGLLSGKGHLIGRGRSAF*TRHFKA
Trigger: TGCCTTGAAGTGCCGAGTCAAAAAGGCTGACCTCCC...CCTGCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484492.5
CDS-3UTR CAA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTAGAAAGCTCCCCTTCTaGTGGCCAGACTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TSPELGFPPDPPRETKESRKLPF*WPDSWK
Trigger: CTTCCAGGAGTCTGGCCACAAGAAGGGGAGCTTTCT...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGATGGCCGTGTTGGACTaGACCCGAAAGGCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LIKITSPELGFPPDPPREMAVLD*TRKALA
Trigger: TGCCAAGGCCTTTCGGGTCAAGTCCAACACGGCCAT...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAACCCTTGATGGCCGTGTaGGACTTGACCCGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: KITSPELGFPPDPPRETKPLMAV*DLTRKA
Trigger: GGCCTTTCGGGTCAAGTCCAACACGGCCATCAAGGG...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTGGGTGGGGAAAGCAGTaGTCACATCAGCTCGAAGCT +
Preference number: 5 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSGWGKQ*SHQLEA
Trigger: AGCTTCGAGCTGATGTGACAACTGCTTTCCCCACCC...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTCTTCTTTATGTCCAGTaGTCGTCCTTCGGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: TSPELGFPPDPPRETKESLLYVQ*SSFGAA
Trigger: TGCTGCCCCGAAGGACGACAACTGGACATAAAGAAG...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR CAA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGAGAAAGCTCCCCTTCTaGTGGCCAGACTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: ITSPELGFPPDPPRETKERKLPF*WPDSWK
Trigger: CTTCCAGGAGTCTGGCCACAAGAAGGGGAGCTTTCT...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGCTTCACAATGGGCTCTaGTCCGGGAAGGGTCACTTG +
Preference number: 5 (lower is better)
Translates to: ITSPELGFPPDPPRETKELHNGL*SGKGHL
Trigger: CAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAG...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp GATTCTCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCCTTCACAATGGGCTCTaGTCCGGGAAGGGTCACTTG +
Preference number: 5 (lower is better)
Translates to: DSPFLHNGLLSGKGHLIGLHNGL*SGKGHL
Trigger: CAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAG...GCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR CAA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTTTACCAGCCCAGAGCTaGGATTTCCACCGGATCCAC +
Preference number: 5 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSLPAQS*DFHRIH
Trigger: GTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS GCA 90 bp GGGAGATGGGCTCTTCTCCTCCTAGAGTTATACCTTGAAGCGTTTTaGTATCTGTGGAGTCTTGGTTCAGGCCCCTGGTGCTGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: GRWALLLLELYLEAF*YLWSLGSGPWCWCL
Trigger: AAGACACCAGCACCAGGGGCCTGAACCAAGACTCCACAGATAGCAAAACGCTTCAAGGTATAACTCTAGGAGGAGAAGAGCCCATCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS-3UTR CAA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGGGGAGGTCAGCCTTTTaGACTCGGCACTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: LIKITSPELGFPPDPPREGRSAF*TRHFKA
Trigger: TGCCTTGAAGTGCCGAGTCAAAAAGGCTGACCTCCC...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR CAA 90 bp TGGACAGATTCTCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGCTTCTTTATGTCCAGTaGTCGTCCTTCGGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: WTDSPFLHNGLLSGKGHLLLYVQ*SSFGAA
Trigger: TGCTGCCCCGAAGGACGACAACTGGACATAAAGAAG...CAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGAGAATCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484492.5
CDS-3UTR CAA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGCTCCTGCTGCATTaGCTGCAGGAACTTAGAGAG +
Preference number: 5 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSLLLLH*LQELRE
Trigger: CTCTCTAAGTTCCTGCAGCAAATGCAGCAGGAGCAG...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp TCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCAGGCTGTAATTCTTCACAATGGGCTCTaGTCCGGGAAGGGTCACTTG +
Preference number: 5 (lower is better)
Translates to: SSQWALVREGSLDRQAVILHNGL*SGKGHL
Trigger: CAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAG...AATTACAGCCTGCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR CAA 90 bp GATTCTCCCTTTCTTCACAATGGGCTCTTGTCCGGGAAGGGTCACTTGATAGGCCTTCTTTATGTCCAGTaGTCGTCCTTCGGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: DSPFLHNGLLSGKGHLIGLLYVQ*SSFGAE
Trigger: CTCAGCCCCGAAGGACGACAACTGGACATAAAGAAG...GCCTATCAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAGAAAGGGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613435.1
CDS TCA 90 bp AACCAGGCTCTAGCAAGTTTCCTAGAACAAAATCCTAGAGGGCAGTaGGTGAGCGGGGTCAGCTTTACCTGTTTCATACAGAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: NQALASFLEQNPRGQ*VSGVSFTCFIQSPA
Trigger: GGCTGGGCTCTGTATGAAACAGGTAAAGCTGACCCCGCTCACTCACTGCCCTCTAGGATTTTGTTCTAGGAAACTTGCTAGAGCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 90 bp TCCCCCTACCAGTTTCTCGAGCACCAGAGGCCATGTTGTAAAGGTTaGCAGAAGATCAGGATAGGACCACAGCGTGTACACTGTTGGATA +
Preference number: 5 (lower is better)
Translates to: SPYQFLEHQRPCCKG*QKIRIGPQRVHCWI
Trigger: TATCCAACAGTGTACACGCTGTGGTCCTATCCTGATCTTCTGCCAACCTTTACAACATGGCCTCTGGTGCTCGAGAAACTGGTAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000620382.4
CDS-3UTR CAA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAATTGACCCGAAAGGCCTaGGCAAACATGTCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: KITSPELGFPPDPPRETKLTRKA*ANMSAG
Trigger: CCCAGCAGACATGTTTGCCAAGGCCTTTCGGGTCAA...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGCTGCTCCTGCTGCATTaGCTGCAGGAACTTAGAGAG +
Preference number: 5 (lower is better)
Translates to: LIKITSPELGFPPDPPRELLLLH*LQELRE
Trigger: CTCTCTAAGTTCCTGCAGCAAATGCAGCAGGAGCAG...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAACTTCACAATGGGCTCTaGTCCGGGAAGGGTCACTTG +
Preference number: 5 (lower is better)
Translates to: KITSPELGFPPDPPRETKLHNGL*SGKGHL
Trigger: CAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAG...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTTTCTTCTTGCCAGGTTaGAGGGCCTTTTCTAGACCT +
Preference number: 5 (lower is better)
Translates to: TSPELGFPPDPPRETKESFFLPG*RAFSRP
Trigger: AGGTCTAGAAAAGGCCCTCAAACCTGGCAAGAAGAA...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS TCA 90 bp AAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTaGGACAAAAGAGTCTGTCACTTCTTCTTGCCAGGTTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: KNYQPRAWISTGSTT*DKRVCHFFLPGLRA
Trigger: GGCCCTCAAACCTGGCAAGAAGAAGTGACAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS GCA 90 bp AGATGGAAAAGGCAAATTAAACTAATGAGCAGTCATACTGGGACCTaGCTGACACTGAGAGGAGGGCCTTTTTCCTCAGCCTTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: RWKRQIKLMSSHTGT*LTLRGGPFSSAFLP
Trigger: GGGGAGGAAGGCTGAGGAAAAAGGCCCTCCTCTCAGTGTCAGGCAGGTCCCAGTATGACTGCTCATTAGTTTAATTTGCCTTTTCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS-3UTR CAA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGACAGCGTGTACACTGTaGGATACAGATTTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLTACTL*DTDFSP
Trigger: TGGAGAAAAATCTGTATCCAACAGTGTACACGCTGT...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp CCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTGCTCACAAGATTTTTGTaGTCTGCATCAACCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PAQSLDFHRIHHVRQKSLLTRFL*SASTRS
Trigger: TGACCTGGTTGATGCAGACAACAAAAATCTTGTGAG...CAGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp GGTGGTCTGCAACAGAATCAAGGTTCAGTTCCAGAGACAGGCTTTGGTTTAACACTTCACAATGGGCTCTaGTCCGGGAAGGGTCACTTG +
Preference number: 5 (lower is better)
Translates to: GGLQQNQGSVPETGFGLTLHNGL*SGKGHL
Trigger: CAAGTGACCCTTCCCGGACAAGAGCCCATTGTGAAG...TGTTAAACCAAAGCCTGTCTCTGGAACTGAACCTTGATTCTGTTGCAGACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS-3UTR CAA 90 bp ATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTTCTTCTTGCCAGGTTaGAGGGCCTTTTCTAGACCT +
Preference number: 5 (lower is better)
Translates to: ITSPELGFPPDPPRETKEFFLPG*RAFSRP
Trigger: AGGTCTAGAAAAGGCCCTCAAACCTGGCAAGAAGAA...CTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGCTTCTTTATGTCCAGTaGTCGTCCTTCGGGGCACAA +
Preference number: 5 (lower is better)
Translates to: LIKITSPELGFPPDPPRELLYVQ*SSFGAQ
Trigger: TTGTGCCCCGAAGGACGACAACTGGACATAAAGAAG...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367114.7
CDS TCA 90 bp ATGGGGTTACCACCACTCACGTACACAGTCACTGCATCCCCTTTGTaGGCATACAACTTCACAATGTTGAGCTCCTCCTTTCCAGGTACT +
Preference number: 5 (lower is better)
Translates to: MGLPPLTYTVTASPL*AYNFTMLSSSFPGT
Trigger: AGTACCTGGAAAGGAGGAGCTCAACATTGTGAAGTTGTATGCTCACAAAGGGGATGCAGTGACTGTGTACGTGAGTGGTGGTAACCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000474408.1
ENST00000620382.4
CDS GCA 90 bp CAGTTCAAAGAGGATGGGGTTACCACCACTCACGTACACAGTCACTaGATCCCCTTTGTGAGCATACAACTTCACAATGTTGAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QFKEDGVTTTHVHSH*IPFVSIQLHNVELL
Trigger: GAGGAGCTCAACATTGTGAAGTTGTATGCTCACAAAGGGGATGCAGTGACTGTGTACGTGAGTGGTGGTAACCCCATCCTCTTTGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000474408.1
ENST00000620382.4
CDS-3UTR CAA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTACAGCGTGTACACTGTaGGATACAGATTTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: TSPELGFPPDPPRETKESTACTL*DTDFSP
Trigger: TGGAGAAAAATCTGTATCCAACAGTGTACACGCTGT...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp ACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTCTCTCACAAGATTTTTGTaGTCTGCATCAACCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TSPELGFPPDPPRETKESLTRFL*SASTRS
Trigger: TGACCTGGTTGATGCAGACAACAAAAATCTTGTGAG...AGACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp CCTTGGGTGGTCTGCAACAGAATCAAGGTTCAGTTCCAGAGACAGGCTTTGGTTTGGCTACATGGTGAATaGAGAAGAGCATGGGCCTTA +
Preference number: 5 (lower is better)
Translates to: PWVVCNRIKVQFQRQALVWLHGE*RRAWAL
Trigger: TAAGGCCCATGCTCTTCTCAATTCACCATGTAGCCA...AACCAAAGCCTGTCTCTGGAACTGAACCTTGATTCTGTTGCAGACCACCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472709.6
CDS CCA 90 bp GCGTGTACACTGTTGGATACAGATTTTTCTCCAGTTCAAAGAGGATaGGGTTACCACCACTCACGTACACAGTCACTGCATCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: ACTLLDTDFSPVQRG*GYHHSRTQSLHPLC
Trigger: ACAAAGGGGATGCAGTGACTGTGTACGTGAGTGGTGGTAACCCCATCCTCTTTGAACTGGAGAAAAATCTGTATCCAACAGTGTACACGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000620382.4
CDS CCA 90 bp CTAAAGGTCTACCCTGCAGTGATTAGGATTCAGAAGCACTCATCATaGGGTCACATGATGTCTAAAATGTGCATCGCAGCTAGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: LKVYPAVIRIQKHSS*GHMMSKMCIAARAR
Trigger: TCTGGCCCTAGCTGCGATGCACATTTTAGACATCATGTGACCCCATGATGAGTGCTTCTGAATCCTAATCACTGCAGGGTAGACCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620382.4
CDS GCA 90 bp AGGTCAGCCTTTTTGACTCGGCACTTCAAGGCATGTAAGAAGCATTaGTGTAACAGCTCATCCATTTGTTCTGCAGGGAAAAGACAAGAG +
Preference number: 5 (lower is better)
Translates to: RSAFLTRHFKACKKH*CNSSSICSAGKRQE
Trigger: CTCTTGTCTTTTCCCTGCAGAACAAATGGATGAGCTGTTACAGCAATGCTTCTTACATGCCTTGAAGTGCCGAGTCAAAAAGGCTGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 90 bp GCATCAAATCTGTTGGATACAGATTTTTCTCCAGTTCAAAGAGGATaGGGTTACCACCACTCACGTACACAGTCACTGCATCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: ASNLLDTDFSPVQRG*GYHHSRTQSLHPLC
Trigger: ACAAAGGGGATGCAGTGACTGTGTACGTGAGTGGTGGTAACCCCATCCTCTTTGAACTGGAGAAAAATCTGTATCCAACAGATTTGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437518.1
CDS CCA 90 bp TTGTCATACCTGTTGGATACAGATTTTTCTCCAGTTCAAAGAGGATaGGGTTACCACCACTCACGTACACAGTCACTGCATCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: LSYLLDTDFSPVQRG*GYHHSRTQSLHPLC
Trigger: ACAAAGGGGATGCAGTGACTGTGTACGTGAGTGGTGGTAACCCCATCCTCTTTGAACTGGAGAAAAATCTGTATCCAACAGGTATGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474408.1
CDS CCA 90 bp TGGCCAACTAATTATCTACTGTCTATGGTCACATTAGTGCTACAATaGCAGCATCGAGCAGTTGCAACAGAGATGGTGTGGCCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: WPTNYLLSMVTLVLQ*QHRAVATEMVWPAK
Trigger: TTTTGCAGGCCACACCATCTCTGTTGCAACTGCTCGATGCTGCCATTGTAGCACTAATGTGACCATAGACAGTAGATAATTAGTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS-3UTR CAA 90 bp TTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAGAGTAGAGCTTTTTGTAGCTaGACTTCTTTATGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LPAQSLDFHRIHHVRQKSRAFCS*TSLCPV
Trigger: AACTGGACATAAAGAAGTCAAGCTACAAAAAGCTCT...ACTCTTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp CTCATAAAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGAATCTCACAAGATTTTaGTTGTCTGCATCAACCAGG +
Preference number: 5 (lower is better)
Translates to: LIKITSPELGFPPDPPRENLTRF*LSASTR
Trigger: CCTGGTTGATGCAGACAACAAAAATCTTGTGAGATT...CTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTTTATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS GCA 90 bp GATGACAGCAGAGAGGGATGCAGACTATGGGACATTCTAAATCAGTaGTGTTCAAGAGAACTTTCCATAGACGTGGAATGTTCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: DDSREGCRLWDILNQ*CSRELSIDVECSLC
Trigger: ACACAGAGAACATTCCACGTCTATGGAAAGTTCTCTTGAACAGCACTGATTTAGAATGTCCCATAGTCTGCATCCCTCTCTGCTGTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS-3UTR CAA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAACTCATCCATTTGTTCTaGAAGCGTTTTGCTATCTGT +
Preference number: 5 (lower is better)
Translates to: KITSPELGFPPDPPRETKLIHLF*KRFAIC
Trigger: ACAGATAGCAAAACGCTTCAAGAACAAATGGATGAG...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271764.7
CDS-3UTR CAA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAAATCTCACAAGATTTTaGTTGTCTGCATCAACCAGG +
Preference number: 5 (lower is better)
Translates to: KITSPELGFPPDPPRETKNLTRF*LSASTR
Trigger: CCTGGTTGATGCAGACAACAAAAATCTTGTGAGATT...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS GCA 90 bp TCCTATTTCTGTCCTTTCAAGGCATATAGAATAAGTGCCCTACTTTaGCAGGGGACAGCTTTGCACATATTTGAGGAGAGATGTCATTGG +
Preference number: 5 (lower is better)
Translates to: SYFCPFKAYRISALL*QGTALHIFEERCHW
Trigger: CCAATGACATCTCTCCTCAAATATGTGCAAAGCTGTCCCCTGGCAAAGTAGGGCACTTATTCTATATGCCTTGAAAGGACAGAAATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 90 bp AGTCCTTCTAGAATCCACCCCAGAATCCTATCCTACAGAATATTCTaGGGCCCCTTTACCATATATTTGCAACCCAAGAAAGTCAGAACA +
Preference number: 5 (lower is better)
Translates to: SPSRIHPRILSYRIF*GPFTIYLQPKKVRT
Trigger: TGTTCTGACTTTCTTGGGTTGCAAATATATGGTAAAGGGGCCCCAGAATATTCTGTAGGATAGGATTCTGGGGTGGATTCTAGAAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS-3UTR CAA 90 bp AAAATTACCAGCCCAGAGCTTGGATTTCCACCGGATCCACCACGTGAGACAAAAAGAGCTTTTTGTAGCTaGACTTCTTTATGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: KITSPELGFPPDPPRETKRAFCS*TSLCPV
Trigger: AACTGGACATAAAGAAGTCAAGCTACAAAAAGCTCT...TTTTGTCTCACGTGGTGGATCCGGTGGAAATCCAAGCTCTGGGCTGGTAATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS-3UTR CAA 90 bp CCTGGTCAGAAGACTGTCCCATGGAAGCTTCATGACTGTATGCTGTTCATTTTTCTCACAAGATTTTTGTaGTCTGCATCAACCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PGQKTVPWKLHDCMLFIFLTRFL*SASTRS
Trigger: TGACCTGGTTGATGCAGACAACAAAAATCTTGTGAG...AAAAATGAACAGCATACAGTCATGAAGCTTCCATGGGACAGTCTTCTGACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR CAA 90 bp GTCTGCATCAACCAGGTCATTTTTCTTGGCGTAGTTAATGACGATCGTTCGGACAATCTCACAAGATTTTaGTTGTCTGCATCAACCAGG +
Preference number: 5 (lower is better)
Translates to: VCINQVIFLGVVNDDRSDNLTRF*LSASTR
Trigger: CCTGGTTGATGCAGACAACAAAAATCTTGTGAGATT...GTCCGAACGATCGTCATTAACTACGCCAAGAAAAATGACCTGGTTGATGCAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484492.5
CDS GCA 90 bp GAATCCTATCCTACAGAATATTCTGGGGCCCCTTTACCATATATTTaGAACCCAAGAAAGTCAGAACAGATTACCAAGTATCCCTCCACA +
Preference number: 5 (lower is better)
Translates to: ESYPTEYSGAPLPYI*NPRKSEQITKYPST
Trigger: TGTGGAGGGATACTTGGTAATCTGTTCTGACTTTCTTGGGTTGCAAATATATGGTAAAGGGGCCCCAGAATATTCTGTAGGATAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS-3UTR CAA 90 bp CTGGTCAGAAGACTGTCCCATGGAAGCTTCATGACTGTATGCTGTTCATTTTTCAATCTCACAAGATTTTaGTTGTCTGCATCAACCAGG +
Preference number: 5 (lower is better)
Translates to: LVRRLSHGSFMTVCCSFFNLTRF*LSASTR
Trigger: CCTGGTTGATGCAGACAACAAAAATCTTGTGAGATT...GAAAAATGAACAGCATACAGTCATGAAGCTTCCATGGGACAGTCTTCTGACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484492.5
ENST00000613435.1
CDS-3UTR CAA 90 bp AGATGCAGTCACATAGGATGGGATCCAATCTCACAAGATTTTTGTTGTCTGCATCTCACAAGATTTTTGTaGTCTGCATCAACCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RCSHIGWDPISQDFCCLHLTRFL*SASTRS
Trigger: TGACCTGGTTGATGCAGACAACAAAAATCTTGTGAG...ATGCAGACAACAAAAATCTTGTGAGATTGGATCCCATCCTATGTGACTGCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484492.5
CDS GCA 72 bp GAGGCTGCCCTGGGACACTTCCTGCAGAGGACACGCTaGCCGATTTGTGAGGTTGCCCAGAACCCCCACGGC +
Preference number: 6 (lower is better)
Translates to: EAALGHFLQRTR*PICEVAQNPHG
Trigger: GCCGTGGGGGTTCTGGGCAACCTCACAAATCGGGCAGCGTGTCCTCTGCAGGAAGTGTCCCAGGGCAGCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS TCA 72 bp GGGACACTTCCTGCAGAGGACACGCTGCCCGATTTGTaGGGTTGCCCAGAACCCCCACGGCAGAGGCAGTGT +
Preference number: 6 (lower is better)
Translates to: GTLPAEDTLPDL*GCPEPPRQRQC
Trigger: ACACTGCCTCTGCCGTGGGGGTTCTGGGCAACCTCACAAATCGGGCAGCGTGTCCTCTGCAGGAAGTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CAA 90 bp GCTCGAAGCTTTCTCCTGTCCGACCCCTTGATGGCCGTGTTGGACTaGACCCGAAAGGCCTTGGCAAACATGTCTGCTGGGGTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: ARSFLLSDPLMAVLD*TRKALANMSAGVAW
Trigger: CCAGGCCACCCCAGCAGACATGTTTGCCAAGGCCTTTCGGGTCAAGTCCAACACGGCCATCAAGGGGTCGGACAGGAGAAAGCTTCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000474408.1
ENST00000620382.4
CDS TCA 72 bp GCTAGCCTGGCATCGCTGCTGAAGGATGGCAGCCACTaGGTATGGGTCCAGACCATAGGCCTCCAAGTTCCG +
Preference number: 6 (lower is better)
Translates to: ASLASLLKDGSH*VWVQTIGLQVP
Trigger: CGGAACTTGGAGGCCTATGGTCTGGACCCATACTCAGTGGCTGCCATCCTTCAGCAGCGATGCCAGGCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS GCA 72 bp TCTTCCCCCTCCAGGGTCATGTGCCTCATGTCTCCCTaGAGGGTGGAGTCCATCTGGACAGACCCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: SSPSRVMCLMSP*RVESIWTDPFS
Trigger: AGAGAAGGGGTCTGTCCAGATGGACTCCACCCTGCAGGGAGACATGAGGCACATGACCCTGGAGGGGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271764.7
ENST00000437518.1
ENST00000617960.4
CDS CAA 72 bp CCCTTGATGGCCGTGTTGGACTTGACCCGAAAGGCCTaGGCAAACATGTCTGCTGGGGTGGCCTGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: PLMAVLDLTRKA*ANMSAGVAWGR
Trigger: TCTTCCCCAGGCCACCCCAGCAGACATGTTTGCCAAGGCCTTTCGGGTCAAGTCCAACACGGCCATCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000474408.1
ENST00000620382.4
CDS GCA 72 bp GTTGGACTTGACCCGAAAGGCCTTGGCAAACATGTCTaGTGGGGTGGCCTGGGGAAGAGAGCACAGAAGCCA +
Preference number: 6 (lower is better)
Translates to: VGLDPKGLGKHV*WGGLGKRAQKP
Trigger: TGGCTTCTGTGCTCTCTTCCCCAGGCCACCCCAGCAGACATGTTTGCCAAGGCCTTTCGGGTCAAGTCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000474408.1
ENST00000620382.4
CDS CAA 72 bp CCTCCCAGACCAGACAACCTTCTGTGGCCTCCAAAGTaGCAACAGCAAACTCACACTGTGGGCAGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: PPRPDNLLWPPK*QQQTHTVGSQA
Trigger: GGCCTGGCTGCCCACAGTGTGAGTTTGCTGTTGCAACTTTGGAGGCCACAGAAGGTTGTCTGGTCTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS TCA 72 bp GGGTGGAGTCCATCTGGACAGACCCCTTCTCTTCACTaGGATCTGCTGAATCCAGGGCCAGTGGAGCAATGG +
Preference number: 6 (lower is better)
Translates to: GWSPSGQTPSLH*DLLNPGPVEQW
Trigger: CCATTGCTCCACTGGCCCTGGATTCAGCAGATCTCAGTGAAGAGAAGGGGTCTGTCCAGATGGACTCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271764.7
ENST00000437518.1
ENST00000461334.1
ENST00000617960.4
CDS GCA 72 bp CTCCCAGACCAGACAACCTTCTGTGGCCTCCAAAGTTaGAACAGCAAACTCACACTGTGGGCAGCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: LPDQTTFCGLQS*NSKLTLWAARP
Trigger: AGGCCTGGCTGCCCACAGTGTGAGTTTGCTGTTGCAACTTTGGAGGCCACAGAAGGTTGTCTGGTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 72 bp CAATGGCTACAGGGGCTCTGTTCCCCACCAAAGAAATaGCACAGAGGTCGCCCTTCTGTACCTGAGGCAGAC +
Preference number: 6 (lower is better)
Translates to: QWLQGLCSPPKK*HRGRPSVPEAD
Trigger: GTCTGCCTCAGGTACAGAAGGGCGACCTCTGTGCCATTTCTTTGGTGGGGAACAGAGCCCCTGTAGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000461334.1
CDS CCA 72 bp TCCAGTTGTCGTCCTTCGGGGCAGCAGGAGAACATGTaGCTGCCAAGGAAAGTGCTGGTGAGTAAAGGGAGG +
Preference number: 6 (lower is better)
Translates to: SSCRPSGQQENM*LPRKVLVSKGR
Trigger: CCTCCCTTTACTCACCAGCACTTTCCTTGGCAGCCACATGTTCTCCTGCTGCCCCGAAGGACGACAACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000484492.5
CDS CCA 72 bp GTGGCCAGACTCCTGGAAGAGCAGGGTCATGCTGGCTaGGACACAGTAGAGGGGTTTTATATCTGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: VARLLEEQGHAG*DTVEGFYIWRV
Trigger: CACCCTCCAGATATAAAACCCCTCTACTGTGTCCCAGCCAGCATGACCCTGCTCTTCCAGGAGTCTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000468891.2
CDS CAA 72 bp TTTCTCCTGTCCGACCCCTTGATGGCCGTGTTGGACTaGACCCGAAAGGCCTTGGCAAACATGTCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: FLLSDPLMAVLD*TRKALANMSAG
Trigger: CCCAGCAGACATGTTTGCCAAGGCCTTTCGGGTCAAGTCCAACACGGCCATCAAGGGGTCGGACAGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000474408.1
ENST00000620382.4
CDS CAA 72 bp CTCTTTCCACAGCATGTCCCTCAACCAGTCCCTGCATaGGCCCCATCCTGTCCTACTACCAAGGAGCACACG +
Preference number: 6 (lower is better)
Translates to: LFPQHVPQPVPA*APSCPTTKEHT
Trigger: CGTGTGCTCCTTGGTAGTAGGACAGGATGGGGCCAATGCAGGGACTGGTTGAGGGACATGCTGTGGAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CAA 90 bp CTGGTACAAGAAAACGACCCCCAGCTTCATCCCTACCTCACCCACTaGGCTCTGAAAGGAACCCATTCCCAGGTACCAAAGCTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: LVQENDPQLHPYLTH*ALKGTHSQVPKLPA
Trigger: GGCTGGGAGCTTTGGTACCTGGGAATGGGTTCCTTTCAGAGCCAAGTGGGTGAGGTAGGGATGAAGCTGGGGGTCGTTTTCTTGTACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 72 bp TCTTTCCACAGCATGTCCCTCAACCAGTCCCTGCATTaGCCCCATCCTGTCCTACTACCAAGGAGCACACGT +
Preference number: 6 (lower is better)
Translates to: SFHSMSLNQSLH*PHPVLLPRSTR
Trigger: ACGTGTGCTCCTTGGTAGTAGGACAGGATGGGGCCAATGCAGGGACTGGTTGAGGGACATGCTGTGGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CAA 72 bp CGAAGCTTTCTCCTGTCCGACCCCTTGATGGCCGTGTaGGACTTGACCCGAAAGGCCTTGGCAAACATGTCT +
Preference number: 6 (lower is better)
Translates to: RSFLLSDPLMAV*DLTRKALANMS
Trigger: AGACATGTTTGCCAAGGCCTTTCGGGTCAAGTCCAACACGGCCATCAAGGGGTCGGACAGGAGAAAGCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000474408.1
ENST00000620382.4
CDS CCA 72 bp TCTTGTGGCCAGACTCCTGGAAGAGCAGGGTCATGCTaGCTGGGACACAGTAGAGGGGTTTTATATCTGGAG +
Preference number: 6 (lower is better)
Translates to: SCGQTPGRAGSC*LGHSRGVLYLE
Trigger: CTCCAGATATAAAACCCCTCTACTGTGTCCCAGCCAGCATGACCCTGCTCTTCCAGGAGTCTGGCCACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000468891.2
CDS CCA 72 bp CTCCCCCGGAAGCTTAAGGGCCATTCTAGTCAGCAGTaGAGTGGAGTTCGTCAGGCTCCTAAATTGAGAGGT +
Preference number: 6 (lower is better)
Translates to: LPRKLKGHSSQQ*SGVRQAPKLRG
Trigger: ACCTCTCAATTTAGGAGCCTGACGAACTCCACTCCACTGCTGACTAGAATGGCCCTTAAGCTTCCGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 72 bp TGTTCCAGAAGAAGATTCCTGACAAAGAGGCTGCCCTaGGACACTTCCTGCAGAGGACACGCTGCCCGATTT +
Preference number: 6 (lower is better)
Translates to: CSRRRFLTKRLP*DTSCRGHAARF
Trigger: AAATCGGGCAGCGTGTCCTCTGCAGGAAGTGTCCCAGGGCAGCCTCTTTGTCAGGAATCTTCTTCTGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CAA 72 bp CATGCTCAAGGTCAGGCAGTGAGGCAACGGCTGCATTaGAACCCAGTACTATCCAAAGCCCACGCTCGTAAC +
Preference number: 6 (lower is better)
Translates to: HAQGQAVRQRLH*NPVLSKAHARN
Trigger: GTTACGAGCGTGGGCTTTGGATAGTACTGGGTTCAAATGCAGCCGTTGCCTCACTGCCTGACCTTGAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CAA 90 bp ATCCTCGGGTGTTTCCAGTCCACAGCCACAATGCTCTCCACCCCTTaGCTCAGCTCCTTCACCTGTATAATCTGCTCCTGCTGCATTTGC +
Preference number: 6 (lower is better)
Translates to: ILGCFQSTATMLSTP*LSSFTCIICSCCIC
Trigger: GCAAATGCAGCAGGAGCAGATTATACAGGTGAAGGAGCTGAGCAAAGGGGTGGAGAGCATTGTGGCTGTGGACTGGAAACACCCGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000367114.7
CDS CCA 72 bp CCACATCAGTGCTTTCCATACCAGCAGGAGAACATGTaGCTGCCAAGGAAAGTGCTGGTGAGTAAAGGGAGG +
Preference number: 6 (lower is better)
Translates to: PHQCFPYQQENM*LPRKVLVSKGR
Trigger: CCTCCCTTTACTCACCAGCACTTTCCTTGGCAGCCACATGTTCTCCTGCTGGTATGGAAAGCACTGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 72 bp AGTGGGGCCCAGCAAGCCGCATCCTGGGGTCAGGTCTaGCCAACTAATTATCTACTGTCTATGGTCACATTA +
Preference number: 6 (lower is better)
Translates to: SGAQQAASWGQV*PTNYLLSMVTL
Trigger: TAATGTGACCATAGACAGTAGATAATTAGTTGGCCAGACCTGACCCCAGGATGCGGCTTGCTGGGCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CAA 72 bp TGTTTCCAGTCCACAGCCACAATGCTCTCCACCCCTTaGCTCAGCTCCTTCACCTGTATAATCTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: CFQSTATMLSTP*LSSFTCIICSC
Trigger: GCAGGAGCAGATTATACAGGTGAAGGAGCTGAGCAAAGGGGTGGAGAGCATTGTGGCTGTGGACTGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000468891.2
CDS GCA 72 bp GCTCTTCTCCTCCTAGAGTTATACCTTGAAGCGTTTTaGTATCTGTGGAGTCTTGGTTCAGGCCCCTGGTGC +
Preference number: 6 (lower is better)
Translates to: ALLLLELYLEAF*YLWSLGSGPWC
Trigger: GCACCAGGGGCCTGAACCAAGACTCCACAGATAGCAAAACGCTTCAAGGTATAACTCTAGGAGGAGAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 72 bp CAGTTTCTCGAGCACCAGAGGCCATGTTGTAAAGGTTaGCAGAAGATCAGGATAGGACCACAGCGTGTACAC +
Preference number: 6 (lower is better)
Translates to: QFLEHQRPCCKG*QKIRIGPQRVH
Trigger: GTGTACACGCTGTGGTCCTATCCTGATCTTCTGCCAACCTTTACAACATGGCCTCTGGTGCTCGAGAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000474408.1
ENST00000620382.4
CDS CAA 90 bp TGGCTGCCAAGGAAAGTGCTGGTGAGTAAAGGGAGGTCAGCCTTTTaGACTCGGCACTTCAAGGCATGTAAGAAGCATTGCTGTAACAGC +
Preference number: 6 (lower is better)
Translates to: WLPRKVLVSKGRSAF*TRHFKACKKHCCNS
Trigger: GCTGTTACAGCAATGCTTCTTACATGCCTTGAAGTGCCGAGTCAAAAAGGCTGACCTCCCTTTACTCACCAGCACTTTCCTTGGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271764.7
ENST00000437518.1
ENST00000484492.5
ENST00000617960.4
CDS CAA 90 bp TCTGCTGAATCCAGGGCCAGTGGAGCAATGGAAGGTGGAGAGGACTaGTTTCCAGACCGCCTGGAAAAATCTCATGTCAGAAACATCAAG +
Preference number: 6 (lower is better)
Translates to: SAESRASGAMEGGED*FPDRLEKSHVRNIK
Trigger: CTTGATGTTTCTGACATGAGATTTTTCCAGGCGGTCTGGAAACAAGTCCTCTCCACCTTCCATTGCTCCACTGGCCCTGGATTCAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS TCA 72 bp GGGGAGATGGGCTCTTCTCCTCCTAGAGTTATACCTTaGAGCGTTTTGCTATCTGTGGAGTCTTGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: GEMGSSPPRVIP*SVLLSVESWFR
Trigger: CCTGAACCAAGACTCCACAGATAGCAAAACGCTTCAAGGTATAACTCTAGGAGGAGAAGAGCCCATCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 72 bp GCTCATCCATTTGTTCTTGAAGCGTTTTGCTATCTGTaGAGTCTTGGTTCAGGCCCCTGGTGCTGGTGTCTT +
Preference number: 6 (lower is better)
Translates to: AHPFVLEAFCYL*SLGSGPWCWCL
Trigger: AAGACACCAGCACCAGGGGCCTGAACCAAGACTCCACAGATAGCAAAACGCTTCAAGAACAAATGGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271764.7
ENST00000437518.1
CDS CCA 72 bp CTCCTAGAGTTATACCTTGAAGCGTTTTGCTATCTGTaGAGTCTTGGTTCAGGCCCCTGGTGCTGGTGTCTT +
Preference number: 6 (lower is better)
Translates to: LLELYLEAFCYL*SLGSGPWCWCL
Trigger: AAGACACCAGCACCAGGGGCCTGAACCAAGACTCCACAGATAGCAAAACGCTTCAAGGTATAACTCTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CAA 72 bp GAGTGTTCACCCAGAGAAGTTGAGCCAGAAGAAACCTaGGAGGGCTTTGTAGCTGAAGACAGGCAAATGCCA +
Preference number: 6 (lower is better)
Translates to: ECSPREVEPEET*EGFVAEDRQMP
Trigger: TGGCATTTGCCTGTCTTCAGCTACAAAGCCCTCCAAGGTTTCTTCTGGCTCAACTTCTCTGGGTGAACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS TCA 72 bp CCACCACTCACGTACACAGTCACTGCATCCCCTTTGTaGGCATACAACTTCACAATGTTGAGCTCCTCCTTT +
Preference number: 6 (lower is better)
Translates to: PPLTYTVTASPL*AYNFTMLSSSF
Trigger: AAAGGAGGAGCTCAACATTGTGAAGTTGTATGCTCACAAAGGGGATGCAGTGACTGTGTACGTGAGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000474408.1
ENST00000620382.4
CDS GCA 72 bp AAGCACTCATCATGGGGTCACATGATGTCTAAAATGTaGATCGCAGCTAGGGCCAGATTGACCAGGGCTATA +
Preference number: 6 (lower is better)
Translates to: KHSSWGHMMSKM*IAARARLTRAI
Trigger: TATAGCCCTGGTCAATCTGGCCCTAGCTGCGATGCACATTTTAGACATCATGTGACCCCATGATGAGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620382.4
CDS CAA 72 bp AGGAAAGTGCTGGTGAGTAAAGGGAGGTCAGCCTTTTaGACTCGGCACTTCAAGGCATGTAAGAAGCATTGC +
Preference number: 6 (lower is better)
Translates to: RKVLVSKGRSAF*TRHFKACKKHC
Trigger: GCAATGCTTCTTACATGCCTTGAAGTGCCGAGTCAAAAAGGCTGACCTCCCTTTACTCACCAGCACTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271764.7
ENST00000437518.1
ENST00000484492.5
ENST00000617960.4
CDS TCA 72 bp CTAGCAAGTTTCCTAGAACAAAATCCTAGAGGGCAGTaGGTGAGCGGGGTCAGCTTTACCTGTTTCATACAG +
Preference number: 6 (lower is better)
Translates to: LASFLEQNPRGQ*VSGVSFTCFIQ
Trigger: CTGTATGAAACAGGTAAAGCTGACCCCGCTCACTCACTGCCCTCTAGGATTTTGTTCTAGGAAACTTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS TCA 72 bp CTGCATCCCCTTTGTGAGCATACAACTTCACAATGTTaGGCTCCTCCTTTCCAGGTACTAACTCAGAGACTT +
Preference number: 6 (lower is better)
Translates to: LHPLCEHTTSQC*APPFQVLTQRL
Trigger: AAGTCTCTGAGTTAGTACCTGGAAAGGAGGAGCTCAACATTGTGAAGTTGTATGCTCACAAAGGGGATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000474408.1
ENST00000620382.4
CDS CCA 72 bp CTGTTGGATACAGATTTTTCTCCAGTTCAAAGAGGATaGGGTTACCACCACTCACGTACACAGTCACTGCAT +
Preference number: 6 (lower is better)
Translates to: LLDTDFSPVQRG*GYHHSRTQSLH
Trigger: ATGCAGTGACTGTGTACGTGAGTGGTGGTAACCCCATCCTCTTTGAACTGGAGAAAAATCTGTATCCAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271764.7
ENST00000367114.7
ENST00000437518.1
ENST00000474408.1
ENST00000620382.4
CDS CAA 72 bp AAGAGAACTTTCCATAGACGTGGAATGTTCTCTGTGTaGTCTAACAGGGCAGCCATTAGCCACATGTGGGTA +
Preference number: 6 (lower is better)
Translates to: KRTFHRRGMFSV*SNRAAISHMWV
Trigger: TACCCACATGTGGCTAATGGCTGCCCTGTTAGACAACACAGAGAACATTCCACGTCTATGGAAAGTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CAA 90 bp AGGACCACAGCGTGTACACTAATGGTAATGGCCATCTTCGTCCTGTaGTCATACCTGTTGGATACAGATTTTTCTCCAGTTCAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: RTTACTLMVMAIFVL*SYLLDTDFSPVQRG
Trigger: TCCTCTTTGAACTGGAGAAAAATCTGTATCCAACAGGTATGACAACAGGACGAAGATGGCCATTACCATTAGTGTACACGCTGTGGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474408.1
CDS GCA 72 bp TGTCCTTTCAAGGCATATAGAATAAGTGCCCTACTTTaGCAGGGGACAGCTTTGCACATATTTGAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: CPFKAYRISALL*QGTALHIFEER
Trigger: TCTCTCCTCAAATATGTGCAAAGCTGTCCCCTGGCAAAGTAGGGCACTTATTCTATATGCCTTGAAAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CAA 90 bp TGTACACTAATGGTAATGGCCATCTTCGTCCTGTTGTCATACCTGTaGGATACAGATTTTTCTCCAGTTCAAAGAGGATGGGGTTACCAC +
Preference number: 6 (lower is better)
Translates to: CTLMVMAIFVLLSYL*DTDFSPVQRGWGYH
Trigger: GTGGTAACCCCATCCTCTTTGAACTGGAGAAAAATCTGTATCCAACAGGTATGACAACAGGACGAAGATGGCCATTACCATTAGTGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474408.1
CDS TCA 72 bp AAAAACGAGTATCACTGTACTGAGAGGCAGAGCAGATaGTCCCTAAGGTCTTCCTTTGGGTCTAAGATTCTA +
Preference number: 6 (lower is better)
Translates to: KNEYHCTERQSR*SLRSSFGSKIL
Trigger: TAGAATCTTAGACCCAAAGGAAGACCTTAGGGATCATCTGCTCTGCCTCTCAGTACAGTGATACTCGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620382.4
CDS GCA 72 bp TTTTTGACTCGGCACTTCAAGGCATGTAAGAAGCATTaGTGTAACAGCTCATCCATTTGTTCTGCAGGGAAA +
Preference number: 6 (lower is better)
Translates to: FLTRHFKACKKH*CNSSSICSAGK
Trigger: TTTCCCTGCAGAACAAATGGATGAGCTGTTACAGCAATGCTTCTTACATGCCTTGAAGTGCCGAGTCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS GCA 72 bp AGAGAGGGATGCAGACTATGGGACATTCTAAATCAGTaGTGTTCAAGAGAACTTTCCATAGACGTGGAATGT +
Preference number: 6 (lower is better)
Translates to: REGCRLWDILNQ*CSRELSIDVEC
Trigger: ACATTCCACGTCTATGGAAAGTTCTCTTGAACAGCACTGATTTAGAATGTCCCATAGTCTGCATCCCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 72 bp AGAATCCACCCCAGAATCCTATCCTACAGAATATTCTaGGGCCCCTTTACCATATATTTGCAACCCAAGAAA +
Preference number: 6 (lower is better)
Translates to: RIHPRILSYRIF*GPFTIYLQPKK
Trigger: TTTCTTGGGTTGCAAATATATGGTAAAGGGGCCCCAGAATATTCTGTAGGATAGGATTCTGGGGTGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 72 bp AATAAAAGTCTGGGCTTAGCAACTTGCTTAAAGACATaGCTAGGACCAAAACTCTCACTCCTGAATCACAGG +
Preference number: 6 (lower is better)
Translates to: NKSLGLATCLKT*LGPKLSLLNHR
Trigger: CCTGTGATTCAGGAGTGAGAGTTTTGGTCCTAGCCATGTCTTTAAGCAAGTTGCTAAGCCCAGACTTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620382.4
CDS CAA 72 bp ATGGTAATGGCCATCTTCGTCCTGTTGTCATACCTGTaGGATACAGATTTTTCTCCAGTTCAAAGAGGATGG +
Preference number: 6 (lower is better)
Translates to: MVMAIFVLLSYL*DTDFSPVQRGW
Trigger: CCATCCTCTTTGAACTGGAGAAAAATCTGTATCCAACAGGTATGACAACAGGACGAAGATGGCCATTACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474408.1
CDS CAA 72 bp GCGTGTACACTAATGGTAATGGCCATCTTCGTCCTGTaGTCATACCTGTTGGATACAGATTTTTCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: ACTLMVMAIFVL*SYLLDTDFSPV
Trigger: AACTGGAGAAAAATCTGTATCCAACAGGTATGACAACAGGACGAAGATGGCCATTACCATTAGTGTACACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474408.1
CDS CAA 90 bp AGAATCCTATCCTACAGAATATTCTGGGGCCCCTTTACCATATATTaGCAACCCAAGAAAGTCAGAACAGATTACCAAGTATCCCTCCAC +
Preference number: 6 (lower is better)
Translates to: RILSYRIFWGPFTIY*QPKKVRTDYQVSLH
Trigger: GTGGAGGGATACTTGGTAATCTGTTCTGACTTTCTTGGGTTGCAAATATATGGTAAAGGGGCCCCAGAATATTCTGTAGGATAGGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 72 bp ATGTACCTATCACCAGTTTCAACAATTACCAACTCATaGCCAACCTTGATTCATCTATACCCCTGTCTACTC +
Preference number: 6 (lower is better)
Translates to: MYLSPVSTITNS*PTLIHLYPCLL
Trigger: GAGTAGACAGGGGTATAGATGAATCAAGGTTGGCCATGAGTTGGTAATTGTTGAAACTGGTGATAGGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CAA 90 bp ACAAAGTTCTTGAGTCTTTACAAAGACAGACTCAAGTCTGCCTTCTaGGCATTTCCACCCAATAATCCTATTTCTGTCCTTTCAAGGCAT +
Preference number: 6 (lower is better)
Translates to: TKFLSLYKDRLKSAF*AFPPNNPISVLSRH
Trigger: ATGCCTTGAAAGGACAGAAATAGGATTATTGGGTGGAAATGCCAAGAAGGCAGACTTGAGTCTGTCTTTGTAAAGACTCAAGAACTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CAA 72 bp TCCTACAGAATATTCTGGGGCCCCTTTACCATATATTaGCAACCCAAGAAAGTCAGAACAGATTACCAAGTA +
Preference number: 6 (lower is better)
Translates to: SYRIFWGPFTIY*QPKKVRTDYQV
Trigger: TACTTGGTAATCTGTTCTGACTTTCTTGGGTTGCAAATATATGGTAAAGGGGCCCCAGAATATTCTGTAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CAA 72 bp TTGAGTCTTTACAAAGACAGACTCAAGTCTGCCTTCTaGGCATTTCCACCCAATAATCCTATTTCTGTCCTT +
Preference number: 6 (lower is better)
Translates to: LSLYKDRLKSAF*AFPPNNPISVL
Trigger: AAGGACAGAAATAGGATTATTGGGTGGAAATGCCAAGAAGGCAGACTTGAGTCTGTCTTTGTAAAGACTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS CCA 72 bp CCTCCTGACATGATAGTATTTACTGAATGCTTATTATaGTTCAGGCTATGTAATCTTTACAGCAATCCCATG +
Preference number: 6 (lower is better)
Translates to: PPDMIVFTECLL*FRLCNLYSNPM
Trigger: CATGGGATTGCTGTAAAGATTACATAGCCTGAACCATAATAAGCATTCAGTAAATACTATCATGTCAGGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4
CDS GCA 72 bp TACTGGTTCTCAATTATTGAGAACCAAGTATTTATATaGCAAGTACATTCTAAGTGCTTCAGCCATGTATAC +
Preference number: 6 (lower is better)
Translates to: YWFSIIENQVFI*QVHSKCFSHVY
Trigger: GTATACATGGCTGAAGCACTTAGAATGTACTTGGCATATAAATACTTGGTTCTCAATAATTGAGAACCAGTA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617960.4