RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF2B3 (Homo sapiens)

Ensembl gene IDs: ENSG00000070785

Ensembl transcript IDs: ENST00000360403.7, ENST00000372182.6, ENST00000372183.7, ENST00000439363.5, ENST00000477953.5, ENST00000480675.5, ENST00000486491.1, ENST00000487532.5, ENST00000497010.1, ENST00000620860.4

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGAAGGAGTCTaGCTTGCTCAGAACTCAGATCTCCATGAGCTGGTCATTCCCCAC +
Preference number: 1 (lower is better)
Translates to: GPANICGFGGQKEGV*LAQNSDLHELVIPH
Trigger: GTGGGGAATGACCAGCTCATGGAGATCTGAGTTCTGAGCAAGTCAGACTCCTTCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
3UTR GCA 90 bp AGCCAGTCAGAAAGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTaGTGCCCCACCGATACATCTTGGCACACAAGAGTTAGGCCACTG +
Preference number: 1 (lower is better)
Translates to: SQSESSLPRSFTLDS*CPTDTSWHTRVRPL
Trigger: CAGTGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGACTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR CCA 90 bp ATGACACATGAACATACACTGTGTACACCTGGAGCCCACCTGACATaGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTGGAAG +
Preference number: 1 (lower is better)
Translates to: MTHEHTLCTPGAHLT*SFGLLHKSPACLWK
Trigger: CTTCCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAGTGTATGTTCATGTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR CCA 90 bp GTTGGGTCAGCCAGTCAGAAAGTAGCCTTCCTAGGAGCTTTACATTaGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTA +
Preference number: 1 (lower is better)
Translates to: VGSASQKVAFLGALH*TAAAPPIHLGTQEL
Trigger: TAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGACTGGCTGACCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR GCA 90 bp CAGTCAGAAAGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTaGCCCACCGATACATCTTGGCACACAAGAGTTAGGCCACTGTAT +
Preference number: 1 (lower is better)
Translates to: QSESSLPRSFTLDSC*PTDTSWHTRVRPLY
Trigger: ATACAGTGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR CCA 90 bp CTGAAGTACTCCCAGGTCCTTTTAGGTGAGGGATACTTTCAGGACTaGGTTGGGTCAGCCAGTCAGAAAGTAGCCTTCCTAGGAGCTTTA +
Preference number: 1 (lower is better)
Translates to: LKYSQVLLGEGYFQD*VGSASQKVAFLGAL
Trigger: TAAAGCTCCTAGGAAGGCTACTTTCTGACTGGCTGACCCAACCCAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGGGAGTACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR CCA 90 bp TGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTaGCTTTGGAGGCCAAAAGGAAGGAGTCTGACTTGCTCAGAACTC +
Preference number: 1 (lower is better)
Translates to: WEINTELNRWAGQHL*LWRPKGRSLTCSEL
Trigger: GAGTTCTGAGCAAGTCAGACTCCTTCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
3UTR CCA 90 bp ATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTaGAGGCCAAAAGGAAGGAGTCTGACTTGCTCAGAACTCAGATCT +
Preference number: 1 (lower is better)
Translates to: INTELNRWAGQHLWL*RPKGRSLTCSELRS
Trigger: AGATCTGAGTTCTGAGCAAGTCAGACTCCTTCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
3UTR CCA 90 bp TTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTaGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGAAGGAGT +
Preference number: 1 (lower is better)
Translates to: LEALLYWEINTELNR*AGQHLWLWRPKGRS
Trigger: ACTCCTTCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR CCA 90 bp TGTACACCCACGTTCACTGCAGCACTATTCACAATAGCCAAGAGGTaGCAGCAACTCAAATGTTTCTGTAGGATGGATCCCTTAATGACC +
Preference number: 1 (lower is better)
Translates to: CTPTFTAALFTIAKR*QQLKCFCRMDPLMT
Trigger: GGTCATTAAGGGATCCATCCTACAGAAACATTTGAGTTGCTGCCACCTCTTGGCTATTGTGAATAGTGCTGCAGTGAACGTGGGTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
3UTR TCA 90 bp ATCCCACTTCTAAATATATATCCAAAAGAACTGAAAGCAAGGTCTTaGAGAGATGTCTGTACACCCACGTTCACTGCAGCACTATTCACA +
Preference number: 1 (lower is better)
Translates to: IPLLNIYPKELKARS*RDVCTPTFTAALFT
Trigger: TGTGAATAGTGCTGCAGTGAACGTGGGTGTACAGACATCTCTTCAAGACCTTGCTTTCAGTTCTTTTGGATATATATTTAGAAGTGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
3UTR-3UTR TCA 90 bp AGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTAGGCCACTGTATCTGCACCTGGAGCCCACCTaGCATGGAGCTTTGGACTGC +
Preference number: 2 (lower is better)
Translates to: SCCPTDTSWHTRVRPLYLHLEPT*HGALDC
Trigger: GCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTG...CAGATACAGTGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR-3UTR CCA 90 bp ACACTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGGGAGCCCACCTGACATaGAGCTTTGGACTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: TLCTPGAHLTWSFGLLHKGAHLT*SFGLLH
Trigger: GTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCC...CTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR TCA 90 bp TGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTGAACTCAGATCTCCATaGGCTGGTCATTCCCCACGA +
Preference number: 2 (lower is better)
Translates to: WSPPDMELWTAPQVSSMPELRSP*AGHSPR
Trigger: TCGTGGGGAATGACCAGCTCATGGAGATCTGAGTTC...AGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR CCA 90 bp CTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTGCCGGCCAACATCTGTaGCTTTGGAGGCCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: LCTPGAHLTWSFGLLHKSAGQHL*LWRPKG
Trigger: TCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGC...AGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR CCA 90 bp AGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTAGGCCACTGTATCTGGGAGCCCACCTGACATaGAGCTTTGGACTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: SCCPTDTSWHTRVRPLYLGAHLT*SFGLLH
Trigger: GTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCC...CAGATACAGTGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR-3UTR CCA 90 bp GCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTGGCAGATCTCCATGAGCTaGTCATTCCCCACGATCACC +
Preference number: 2 (lower is better)
Translates to: AHLTWSFGLLHKSPACLWQISMS*SFPTIT
Trigger: GGTGATCGTGGGGAATGACCAGCTCATGGAGATCTG...CCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR TCA 90 bp ACACTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGGAACTCAGATCTCCATaGGCTGGTCATTCCCCACGA +
Preference number: 2 (lower is better)
Translates to: TLCTPGAHLTWSFGLLHKELRSP*AGHSPR
Trigger: TCGTGGGGAATGACCAGCTCATGGAGATCTGAGTTC...CTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR CCA 90 bp CACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTGGAAGGCCGGCCAACATCTGTaGCTTTGGAGGCCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: HLTWSFGLLHKSPACLWKAGQHL*LWRPKG
Trigger: TCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGC...CTTCCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR CCA 90 bp CTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACGCCGGCCAACATCTGTaGCTTTGGAGGCCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: LPRSFTLDSCCPTDTSWHAGQHL*LWRPKG
Trigger: TCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGC...GTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR CAA 90 bp CGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGAAGGAGTCTGACTaGCTCAGAACTCAGATCTCCATGAGCTGGTCATTCCCCACGATC +
Preference number: 2 (lower is better)
Translates to: RPTSVALEAKRKESD*LRTQISMSWSFPTI
Trigger: GATCGTGGGGAATGACCAGCTCATGGAGATCTGAGTTCTGAGCAAGTCAGACTCCTTCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR TCA 90 bp ACACCCACGTTCACTGCAGCACTATTCACAATAGCCAAGAGGTGGCAGCAACTCTGCTGTCCACTCCAATaGAGTCACGCTGCTCCACTG +
Preference number: 2 (lower is better)
Translates to: TPTFTAALFTIAKRWQQLCCPLQ*SHAAPL
Trigger: CAGTGGAGCAGCGTGACTTCATTGGAGTGGACAGCA...GAGTTGCTGCCACCTCTTGGCTATTGTGAATAGTGCTGCAGTGAACGTGGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
3UTR CAA 90 bp GGTTGGGTCAGCCAGTCAGAAAGTAGCCTTCCTAGGAGCTTTACATaGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTT +
Preference number: 2 (lower is better)
Translates to: GWVSQSESSLPRSFT*DSCCPTDTSWHTRV
Trigger: AACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGACTGGCTGACCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR-3UTR CCA 90 bp CATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTAGGCCACCAACATCTGTGGCTTTaGAGGCCAAAAGGAAGGAGT +
Preference number: 2 (lower is better)
Translates to: HWTAAAPPIHLGTQELGHQHLWL*RPKGRS
Trigger: ACTCCTTCCTTTTGGCCTCCAAAGCCACAGATGTTG...GTGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR-3UTR CCA 90 bp ACACTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTaGAAGCCCTTCTTTATTGGG +
Preference number: 2 (lower is better)
Translates to: TLCTPGAHLTWSFGLLHKSPACL*KPFFIG
Trigger: CCCAATAAAGAAGGGCTTCCAAAGGCATGCTGGAGA...CTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR CCA 90 bp CACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTGGAAGCAACATCTGTGGCTTTaGAGGCCAAAAGGAAGGAGT +
Preference number: 2 (lower is better)
Translates to: HLTWSFGLLHKSPACLWKQHLWL*RPKGRS
Trigger: ACTCCTTCCTTTTGGCCTCCAAAGCCACAGATGTTG...CTTCCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR CCA 90 bp TACACTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAATCTCCAGCATGCCTTTaGAAGCCCTTCTTTATTGGG +
Preference number: 2 (lower is better)
Translates to: YTVYTWSPPDMELWTAPQSPACL*KPFFIG
Trigger: CCCAATAAAGAAGGGCTTCCAAAGGCATGCTGGAGA...TTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR GCA 90 bp TCCAAGTCTGCTTCATTAGCCATGAAGAGCAGCCTCTTTCCTGTGCTGTCCACTCGGGAACAGGTTCTATaGTATCTTGGCCTTTTCTCA +
Preference number: 2 (lower is better)
Translates to: SKSASLAMKSSLFPVLSTREQVL*YLGLFS
Trigger: TGAGAAAAGGCCAAGATAGCATAGAACCTGTTCCCG...AGTGGACAGCACAGGAAAGAGGCTGCTCTTCATGGCTAATGAAGCAGACTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
3UTR-3UTR CCA 90 bp CTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCAGATCTCCATGAGCTaGTCATTCCCCACGATCACC +
Preference number: 2 (lower is better)
Translates to: LYWEINTELNRWAGQHLWQISMS*SFPTIT
Trigger: GGTGATCGTGGGGAATGACCAGCTCATGGAGATCTG...CCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR TCA 90 bp ACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTAGGCCAATGATCTTTACCACATaGCACATGAACATACACTGT +
Preference number: 2 (lower is better)
Translates to: TLDSCCPTDTSWHTRVRPMIFTT*HMNIHC
Trigger: ACAGTGTATGTTCATGTGTCATGTGGTAAAGATCAT...TGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR CAA 90 bp CCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTaGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGG +
Preference number: 2 (lower is better)
Translates to: PDMELWTAPQVSSMP*EALLYWEINTELNR
Trigger: CCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR TCA 90 bp ACACCCACGTTCACTGCAGCACTATTCACAATAGCCAAGAGGTGGCAGCAACTCCATCAACATAGCAAGTaGTGCATCATAAGCTCTAAA +
Preference number: 2 (lower is better)
Translates to: TPTFTAALFTIAKRWQQLHQHSK*CIISSK
Trigger: TTTAGAGCTTATGATGCATCACTTGCTATGTTGATG...GAGTTGCTGCCACCTCTTGGCTATTGTGAATAGTGCTGCAGTGAACGTGGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
3UTR-3UTR TCA 90 bp GCTCCAGATGATCTTTACCACATGACACATGAACATACACTGTGTACACCTGGACAAAAGGAAGGAGTCTaGCTTGCTCAGAACTCAGAT +
Preference number: 2 (lower is better)
Translates to: APDDLYHMTHEHTLCTPGQKEGV*LAQNSD
Trigger: ATCTGAGTTCTGAGCAAGTCAGACTCCTTCCTTTTG...TCCAGGTGTACACAGTGTATGTTCATGTGTCATGTGGTAAAGATCATCTGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620860.4
3UTR CAA 90 bp AATCCCACTTCTAAATATATATCCAAAAGAACTGAAAGCAAGGTCTaGAAGAGATGTCTGTACACCCACGTTCACTGCAGCACTATTCAC +
Preference number: 2 (lower is better)
Translates to: NPTSKYISKRTESKV*KRCLYTHVHCSTIH
Trigger: GTGAATAGTGCTGCAGTGAACGTGGGTGTACAGACATCTCTTCAAGACCTTGCTTTCAGTTCTTTTGGATATATATTTAGAAGTGGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
3UTR-3UTR CAA 90 bp GAAAGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCGATACACCTAGGAGCTTTACATaGGACAGCTGCTGCCCCACC +
Preference number: 3 (lower is better)
Translates to: ESSLPRSFTLDSCCPTDTPRSFT*DSCCPT
Trigger: GGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGG...TGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR CCA 72 bp ACTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTaGACTGCTCCACAAGTCTCCAGCATGCCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: TVYTWSPPDMEL*TAPQVSSMPLE
Trigger: TTCCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR CCA 72 bp GAACATACACTGTGTACACCTGGAGCCCACCTGACATaGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGC +
Preference number: 3 (lower is better)
Translates to: EHTLCTPGAHLT*SFGLLHKSPAC
Trigger: GCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAGTGTATGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR TCA 72 bp CACATGAACATACACTGTGTACACCTGGAGCCCACCTaGCATGGAGCTTTGGACTGCTCCACAAGTCTCCAG +
Preference number: 3 (lower is better)
Translates to: HMNIHCVHLEPT*HGALDCSTSLQ
Trigger: CTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAGTGTATGTTCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR CCA 72 bp GAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTaGAGGCCAAAAGGAAGGAGTCTGACTTGCTCAGAA +
Preference number: 3 (lower is better)
Translates to: ELNRWAGQHLWL*RPKGRSLTCSE
Trigger: TTCTGAGCAAGTCAGACTCCTTCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR CCA 72 bp GCCAGTCAGAAAGTAGCCTTCCTAGGAGCTTTACATTaGACAGCTGCTGCCCCACCGATACATCTTGGCACA +
Preference number: 3 (lower is better)
Translates to: ASQKVAFLGALH*TAAAPPIHLGT
Trigger: TGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR-3UTR CAA 90 bp GAGCTTTACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTCCTGTCCCACACACTaGCTCCAGATGATCTTTACC +
Preference number: 3 (lower is better)
Translates to: ELYIGQLLPHRYILAHKSSCPTH*LQMIFT
Trigger: GGTAAAGATCATCTGGAGCAAGTGTGTGGGACAGGA...ACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR TCA 72 bp GGAAGGAGTCTGACTTGCTCAGAACTCAGATCTCCATaGGCTGGTCATTCCCCACGATCACCTCATTCACTC +
Preference number: 3 (lower is better)
Translates to: GRSLTCSELRSP*AGHSPRSPHSL
Trigger: GAGTGAATGAGGTGATCGTGGGGAATGACCAGCTCATGGAGATCTGAGTTCTGAGCAAGTCAGACTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
3UTR GCA 72 bp AGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTaGCCCACCGATACATCTTGGCACACAAGAGTTAGG +
Preference number: 3 (lower is better)
Translates to: SSLPRSFTLDSC*PTDTSWHTRVR
Trigger: CCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR CCA 72 bp AATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTaGCTTTGGAGGCCAAAAGGAAGGAGTCTGACTTGC +
Preference number: 3 (lower is better)
Translates to: NTELNRWAGQHL*LWRPKGRSLTC
Trigger: GCAAGTCAGACTCCTTCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR CCA 72 bp TCCCAGGTCCTTTTAGGTGAGGGATACTTTCAGGACTaGGTTGGGTCAGCCAGTCAGAAAGTAGCCTTCCTA +
Preference number: 3 (lower is better)
Translates to: SQVLLGEGYFQD*VGSASQKVAFL
Trigger: TAGGAAGGCTACTTTCTGACTGGCTGACCCAACCCAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR GCA 72 bp GAAAGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTaGTGCCCCACCGATACATCTTGGCACACAAGAGTT +
Preference number: 3 (lower is better)
Translates to: ESSLPRSFTLDS*CPTDTSWHTRV
Trigger: AACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR-3UTR CAA 90 bp TGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTGGAAGCCCTTCTTTATaGGGAAATAAATACAGAGTT +
Preference number: 3 (lower is better)
Translates to: WSPPDMELWTAPQVSSMPGSPSL*GNKYRV
Trigger: AACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC...AGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR-3UTR CAA 90 bp GAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGAGGAAGGAGTCTGACTaGCTCAGAACTCAGATCTCC +
Preference number: 3 (lower is better)
Translates to: EINTELNRWAGQHLWLWRRKESD*LRTQIS
Trigger: GGAGATCTGAGTTCTGAGCAAGTCAGACTCCTTCCT...CCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
3UTR GCA 72 bp AAGGTCTTGAAGAGATGTCTGTACACCCACGTTCACTaGAGCACTATTCACAATAGCCAAGAGGTGGCAGCA +
Preference number: 3 (lower is better)
Translates to: KVLKRCLYTHVH*STIHNSQEVAA
Trigger: TGCTGCCACCTCTTGGCTATTGTGAATAGTGCTGCAGTGAACGTGGGTGTACAGACATCTCTTCAAGACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
3UTR-3UTR CAA 90 bp TACACTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGGAAGCCCTTCTTTATaGGGAAATAAATACAGAGTT +
Preference number: 3 (lower is better)
Translates to: YTVYTWSPPDMELWTAPQGSPSL*GNKYRV
Trigger: AACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC...TTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
3UTR CCA 72 bp ACGTTCACTGCAGCACTATTCACAATAGCCAAGAGGTaGCAGCAACTCAAATGTTTCTGTAGGATGGATCCC +
Preference number: 3 (lower is better)
Translates to: TFTAALFTIAKR*QQLKCFCRMDP
Trigger: GGGATCCATCCTACAGAAACATTTGAGTTGCTGCCACCTCTTGGCTATTGTGAATAGTGCTGCAGTGAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
3UTR-3UTR CAA 90 bp TCCAAGTCTGCTTCATTAGCCATGAAGAGCAGCCTCTTTCCTGTGCTGTCCACTAGGTTCTATGCTATCTaGGCCTTTTCTCATCAACAT +
Preference number: 3 (lower is better)
Translates to: SKSASLAMKSSLFPVLSTRFYAI*AFSHQH
Trigger: ATGTTGATGAGAAAAGGCCAAGATAGCATAGAACCT...AGTGGACAGCACAGGAAAGAGGCTGCTCTTCATGGCTAATGAAGCAGACTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
3UTR TCA 72 bp TATGCTATCTTGGCCTTTTCTCATCAACATAGCAAGTaGTGCATCATAAGCTCTAAACAGGTCCACAACCTC +
Preference number: 3 (lower is better)
Translates to: YAILAFSHQHSK*CIISSKQVHNL
Trigger: GAGGTTGTGGACCTGTTTAGAGCTTATGATGCATCACTTGCTATGTTGATGAGAAAAGGCCAAGATAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
3UTR-3UTR CAA 90 bp AGCATGCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGGGAAGCCCTTCTTTATaGGGAAATAAATACAGAGTT +
Preference number: 3 (lower is better)
Translates to: SMPLEALLYWEINTELNRGSPSL*GNKYRV
Trigger: AACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC...CCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGCATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp GCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTGGTCTCCACGCCGCCTCTaGCTGACAGCCCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: AHLTWSFGLLHKSPACLWSPRRL*LTAQWR
Trigger: GCGCCATTGGGCTGTCAGTCAGAGGCGGCGTGGAGA...CCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS-3UTR TCA 90 bp GGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTCACCTGGAGCCCACCTaGCATGGAGCTTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: GAHLTWSFGLLHKSPACLHLEPT*HGALDC
Trigger: GCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTG...AAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp ACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCAAAGACCGCCGAGCGATaGATGACGGAGGGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: TPGAHLTWSFGLLHKSPAKTAER*MTEGKH
Trigger: GTGCTTCCCCTCCGTCATCCATCGCTCGGCGGTCTT...TGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS-3UTR TCA 90 bp TACCACATGACACATGAACATACACTGTGTACACCTGGAGCCCACCTGACATGGCACGCCGCCTCTGACTaGCAGCCCAATGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: YHMTHEHTLCTPGAHLTWHAASD*QPNGAG
Trigger: GCCTGCGCCATTGGGCTGTCAGTCAGAGGCGGCGTG...CCATGTCAGGTGGGCTCCAGGTGTACACAGTGTATGTTCATGTGTCATGTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS-3UTR CCA 90 bp CCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCGCCGGCCAACATCTGTaGCTTTGGAGGCCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PGAHLTWSFGLLHKSPACAGQHL*LWRPKG
Trigger: TCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGC...GCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp AGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTAGGCCACTGTATCTGGGCGCAGGCGCGCGATaGCCGAGAAACTCGATGGAA +
Preference number: 4 (lower is better)
Translates to: SCCPTDTSWHTRVRPLYLGAGAR*PRNSME
Trigger: TTCCATCGAGTTTCTCGGCCATCGCGCGCCTGCGCC...CAGATACAGTGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS-3UTR TCA 90 bp ACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCAGTGTCTCTGGCCCAATaGGGCTGTCAACTCCAACCA +
Preference number: 4 (lower is better)
Translates to: TPGAHLTWSFGLLHKSPAVSLAQ*GCQLQP
Trigger: TGGTTGGAGTTGACAGCCTCATTGGGCCAGAGACAC...TGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp CCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCGAACTCAGATCTCCATaGGCTGGTCATTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: PGAHLTWSFGLLHKSPACELRSP*AGHSPR
Trigger: TCGTGGGGAATGACCAGCTCATGGAGATCTGAGTTC...GCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR GCA 90 bp ACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGTAGAGTCCCAGTGTaGTCACTCGAGAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TPGAHLTWSFGLLHKSPACRVPV*SLESRA
Trigger: GGCTCTGCTCTCGAGTGAGCACACTGGGACTCTACA...TGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp ACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTAGGCCAAGCTTGTGTGCGGCCTaGCAGGGCAGAAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: TLDSCCPTDTSWHTRVRPSLCAA*QGRSHS
Trigger: GCTGTGACTTCTGCCCTGCCAGGCCGCACACAAGCT...TGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp CAGTCAGAAAGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCAGCTTGTGTGCGGCCTaGCAGGGCAGAAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: QSESSLPRSFTLDSCCPTSLCAA*QGRSHS
Trigger: GCTGTGACTTCTGCCCTGCCAGGCCGCACACAAGCT...GGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp CTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTTGCTGTCCACTCCAATaGAGTCACGCTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LCTPGAHLTWSFGLLHKSCCPLQ*SHAAPL
Trigger: CAGTGGAGCAGCGTGACTTCATTGGAGTGGACAGCA...AGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp TGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTAGAGCCCCTCTTTCATaGTGTGGACATAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: WSPPDMELWTAPQVSSMPRAPLS*CGHSSA
Trigger: TGCGCTGCTATGTCCACATCATGAAAGAGGGGCTCT...AGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp GAAAGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCGATACACACCTGGAGCCCACCTaGCATGGAGCTTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: ESSLPRSFTLDSCCPTDTHLEPT*HGALDC
Trigger: GCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTG...TGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp CATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTAGGCCACGCCGGCCAACATCTGTaGCTTTGGAGGCCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: HWTAAAPPIHLGTQELGHAGQHL*LWRPKG
Trigger: TCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGC...GTGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp GGAGCTTTACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGGGAGCCCACCTGACATaGAGCTTTGGACTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GALHWTAAAPPIHLGTQEGAHLT*SFGLLH
Trigger: GTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCC...CTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp TACTCCCAGGTCCTTTTAGGTGAGGGATACTTTCAGGACTGGGTTGGGTCAGCCGTGTCTCTGGCCCAATaGGGCTGTCAACTCCAACCA +
Preference number: 4 (lower is better)
Translates to: YSQVLLGEGYFQDWVGSAVSLAQ*GCQLQP
Trigger: TGGTTGGAGTTGACAGCCTCATTGGGCCAGAGACAC...GGCTGACCCAACCCAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGGGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp CTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTACATTGGACAGCTGCTaGCCCACCGATACATCTTGG +
Preference number: 4 (lower is better)
Translates to: LCTPGAHLTWSFGLLHKSTLDSC*PTDTSW
Trigger: CCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGT...AGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp CCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCTGTTTGCTGACAATCTaGGCTGACGAATGGACTGGT +
Preference number: 4 (lower is better)
Translates to: PGAHLTWSFGLLHKSPACCLLTI*ADEWTG
Trigger: ACCAGTCCATTCGTCAGCCCAGATTGTCAGCAAACA...GCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp TCAGAAAGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCGATTGCTGTCCACTCCAATaGAGTCACGCTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: SESSLPRSFTLDSCCPTDCCPLQ*SHAAPL
Trigger: CAGTGGAGCAGCGTGACTTCATTGGAGTGGACAGCA...ATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp AGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGAAGAGAGCCCCTCTTTCATaGTGTGGACATAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RVKQVGRPTSVALEAKRKRAPLS*CGHSSA
Trigger: TGCGCTGCTATGTCCACATCATGAAAGAGGGGCTCT...CTTCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp CCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTGGAAAGAGCCCCTCTTTCATaGTGTGGACATAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: PPDMELWTAPQVSSMPLERAPLS*CGHSSA
Trigger: TGCGCTGCTATGTCCACATCATGAAAGAGGGGCTCT...TTCCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp TCCCACACACTTGCTCCAGATGATCTTTACCACATGACACATGAACATACACTGCCGCCGAGCGATGGATaGCGGAGGGGAAGCACACTC +
Preference number: 4 (lower is better)
Translates to: SHTLAPDDLYHMTHEHTLPPSDG*RRGSTL
Trigger: GAGTGTGCTTCCCCTCCGTCATCCATCGCTCGGCGG...CAGTGTATGTTCATGTGTCATGTGGTAAAGATCATCTGGAGCAAGTGTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS-3UTR GCA 90 bp TCAGAAAGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCGATTGTAGAGTCCCAGTGTaGTCACTCGAGAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SESSLPRSFTLDSCCPTDCRVPV*SLESRA
Trigger: GGCTCTGCTCTCGAGTGAGCACACTGGGACTCTACA...ATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp ACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCAGAGCAGACAGCAATTTaGGCACCTGTCTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: TPGAHLTWSFGLLHKSPAEQTAI*APVCLL
Trigger: AAGCAAACAGACAGGTGCCCAAATTGCTGTCTGCTC...TGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp TGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTGAGCAGACAGCAATTTaGGCACCTGTCTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: WSPPDMELWTAPQVSSMPEQTAI*APVCLL
Trigger: AAGCAAACAGACAGGTGCCCAAATTGCTGTCTGCTC...AGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp TACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCCAGATGACACTGCCTTaGATATTGCTTCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: YTWSPPDMELWTAPQVSSQMTLP*ILLPSS
Trigger: GGAGGAAGGAAGCAATATCCAAGGCAGTGTCATCTG...GCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS-3UTR CCA 90 bp CTTTCAGGACTGGGTTGGGTCAGCCAGTCAGAAAGTAGCCTTCCTAGGAGCTTTGCCGGCCAACATCTGTaGCTTTGGAGGCCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LSGLGWVSQSESSLPRSFAGQHL*LWRPKG
Trigger: TCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGC...AAAGCTCCTAGGAAGGCTACTTTCTGACTGGCTGACCCAACCCAGTCCTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp TACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGCCTGACATGGAGCTTTaGACTGCTCCACAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: YRVKQVGRPTSVALEAKRPDMEL*TAPQVS
Trigger: GGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGG...CCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp CTGGGTTGGGTCAGCCAGTCAGAAAGTAGCCTTCCTAGGAGCTTTACATTGGACCTAGGAGCTTTACATTaGACAGCTGCTGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: LGWVSQSESSLPRSFTLDLGALH*TAAAPP
Trigger: CGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAG...GTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGACTGGCTGACCCAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR CAA 72 bp AGCCAGTCAGAAAGTAGCCTTCCTAGGAGCTTTACATaGGACAGCTGCTGCCCCACCGATACATCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: SQSESSLPRSFT*DSCCPTDTSWH
Trigger: GTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGACTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp AATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGCTGACAATCTGGGCTaGCGAATGGACTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: NTELNRWAGQHLWLWRPKADNLG*RMDWWF
Trigger: GAACCACCAGTCCATTCGTCAGCCCAGATTGTCAGC...TTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp CCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTGGAACAACCAGGTGTTTGCTaGCAATCTGGGCTGACGAAT +
Preference number: 4 (lower is better)
Translates to: PPDMELWTAPQVSSMPLEQPGVC*QSGLTN
Trigger: ATTCGTCAGCCCAGATTGTCAGCAAACACCTGGTTG...TTCCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp GGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTTCCTCCACAGTGACTaGGTTCATGAGAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: GAHLTWSFGLLHKSPACLFLHSD*VHEKAI
Trigger: AATTGCCTTCTCATGAACTCAGTCACTGTGGAGGAA...AAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp AGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCGATACATCTGAACTCAGATCTCCATaGGCTGGTCATTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: SSLPRSFTLDSCCPTDTSELRSP*AGHSPR
Trigger: TCGTGGGGAATGACCAGCTCATGGAGATCTGAGTTC...AGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp GCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTGGAGATCCTCCACCTACTaGCATCACTACTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: AHLTWSFGLLHKSPACLWRSSTY*HHYCLK
Trigger: TTTCAAGCAGTAGTGATGGCAGTAGGTGGAGGATCT...CCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp ACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGAGTAGCGCAAAGAATCTaGAGTTCCCATGTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: TELNRWAGQHLWLWRPKGVAQRI*SSHVSV
Trigger: GACGCTGACATGGGAACTGCAGATTCTTTGCGCTAC...TCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp CTTTCAGGACTGGGTTGGGTCAGCCAGTCAGAAAGTAGCCTTCCTAGGAGCTTTGCAGTCCTTGATGTCTaGACCCTTCTCGATCACAGC +
Preference number: 4 (lower is better)
Translates to: LSGLGWVSQSESSLPRSFAVLDV*TLLDHS
Trigger: GCTGTGATCGAGAAGGGTGCAGACATCAAGGACTGC...AAAGCTCCTAGGAAGGCTACTTTCTGACTGGCTGACCCAACCCAGTCCTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS-3UTR GCA 90 bp CTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTGGAAGGAGTCTGACTTaGTCAGAACTCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: LCTPGAHLTWSFGLLHKSGRSLT*SELRSP
Trigger: TGGAGATCTGAGTTCTGAGCAAGTCAGACTCCTTCC...AGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR GCA 90 bp CAGTCAGAAAGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCCATGGAGCTTTGGACTaGTCCACAAGTCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QSESSLPRSFTLDSCCPTHGALD*STSLQH
Trigger: ATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATG...GGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp AGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGAAGCATGGAGCTTTGGACTaGTCCACAAGTCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RVKQVGRPTSVALEAKRKHGALD*STSLQH
Trigger: ATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATG...CTTCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp GCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTGGAGGTTTGTTCCCAACTaGAAGCAGAGGTTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: AHLTWSFGLLHKSPACLWRFVPN*KQRFGN
Trigger: ATTCCCAAACCTCTGCTTCCAGTTGGGAACAAACCT...CCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp TGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGAGCAGACAGCAATTTaGGCACCTGTCTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: CTPGAHLTWSFGLLHKSPEQTAI*APVCLL
Trigger: AAGCAAACAGACAGGTGCCCAAATTGCTGTCTGCTC...TGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp AGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGAAGATCTGGGCTGACGAATaGACTGGTGGTTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RVKQVGRPTSVALEAKRKIWADE*TGGSSG
Trigger: TCCAGAAGAACCACCAGTCCATTCGTCAGCCCAGAT...CTTCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp CTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTTGTTTGCTGACAATCTaGGCTGACGAATGGACTGGT +
Preference number: 4 (lower is better)
Translates to: LCTPGAHLTWSFGLLHKSCLLTI*ADEWTG
Trigger: ACCAGTCCATTCGTCAGCCCAGATTGTCAGCAAACA...AGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp TACTCCCAGGTCCTTTTAGGTGAGGGATACTTTCAGGACTGGGTTGGGTCAGCCTCCAATCTGTGTCTCTaGCCCAATGAGGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: YSQVLLGEGYFQDWVGSASNLCL*PNEAVN
Trigger: GTTGACAGCCTCATTGGGCCAGAGACACAGATTGGA...GGCTGACCCAACCCAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp ACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGATCCAATCTGTGTCTCTaGCCCAATGAGGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: TELNRWAGQHLWLWRPKGSNLCL*PNEAVN
Trigger: GTTGACAGCCTCATTGGGCCAGAGACACAGATTGGA...TCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp CAGAACTCAGATCTCCATGAGCTGGTCATTCCCCACGATCACCTCATTCACTCGCAGATCTCCATGAGCTaGTCATTCCCCACGATCACC +
Preference number: 4 (lower is better)
Translates to: QNSDLHELVIPHDHLIHSQISMS*SFPTIT
Trigger: GGTGATCGTGGGGAATGACCAGCTCATGGAGATCTG...CGAGTGAATGAGGTGATCGTGGGGAATGACCAGCTCATGGAGATCTGAGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp GAGCTTTACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTCAGATCTCCATGAGCTaGTCATTCCCCACGATCACC +
Preference number: 4 (lower is better)
Translates to: ELYIGQLLPHRYILAHKSQISMS*SFPTIT
Trigger: GGTGATCGTGGGGAATGACCAGCTCATGGAGATCTG...ACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp CTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCAACATCTGTGGCTTTaGAGGCCAAAAGGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LCTPGAHLTWSFGLLHKSQHLWL*RPKGRS
Trigger: ACTCCTTCCTTTTGGCCTCCAAAGCCACAGATGTTG...AGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp CTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTTCTCCAGCATGCCTTTaGAAGCCCTTCTTTATTGGG +
Preference number: 4 (lower is better)
Translates to: LCTPGAHLTWSFGLLHKSSPACL*KPFFIG
Trigger: CCCAATAAAGAAGGGCTTCCAAAGGCATGCTGGAGA...AGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp ACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTAGGCCACCCACCGATACATCTTaGCACACAAGAGTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: TLDSCCPTDTSWHTRVRPPTDTS*HTRVRP
Trigger: TGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGG...TGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp TACCACATGACACATGAACATACACTGTGTACACCTGGAGCCCACCTGACATGGCTAGGAGCTTTACATTaGACAGCTGCTGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: YHMTHEHTLCTPGAHLTWLGALH*TAAAPP
Trigger: CGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAG...CCATGTCAGGTGGGCTCCAGGTGTACACAGTGTATGTTCATGTGTCATGTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp ACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTAGGCCACTTTCAGGACTGGGTTaGGTCAGCCAGTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: TLDSCCPTDTSWHTRVRPLSGLG*VSQSES
Trigger: ACTTTCTGACTGGCTGACCCAACCCAGTCCTGAAAG...TGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp GAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGGCTGACAATCTGGGCTaGCGAATGGACTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: EINTELNRWAGQHLWLWRADNLG*RMDWWF
Trigger: GAACCACCAGTCCATTCGTCAGCCCAGATTGTCAGC...CCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp CTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCAAAAGGAAGGAGTCTaGCTTGCTCAGAACTCAGAT +
Preference number: 4 (lower is better)
Translates to: LCTPGAHLTWSFGLLHKSQKEGV*LAQNSD
Trigger: ATCTGAGTTCTGAGCAAGTCAGACTCCTTCCTTTTG...AGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR GCA 90 bp AAAGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCGATACATACATTGGACAGCTGCTaGCCCACCGATACATCTTGG +
Preference number: 4 (lower is better)
Translates to: KVAFLGALHWTAAAPPIHTLDSC*PTDTSW
Trigger: CCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGT...ATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp ACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGATTTACATTGGACAGCTaGTGCCCCACCGATACATCT +
Preference number: 4 (lower is better)
Translates to: TELNRWAGQHLWLWRPKGFTLDS*CPTDTS
Trigger: AGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAA...TCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp TTCACTGCAGCACTATTCACAATAGCCAAGAGGTGGCAGCAACTCAAATGTTTCAGCTTGTGTGCGGCCTaGCAGGGCAGAAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: FTAALFTIAKRWQQLKCFSLCAA*QGRSHS
Trigger: GCTGTGACTTCTGCCCTGCCAGGCCGCACACAAGCT...GAAACATTTGAGTTGCTGCCACCTCTTGGCTATTGTGAATAGTGCTGCAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR CCA 90 bp TACACTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAATCCACAAGACCCGTGTaGAAACGTATTCTAGGATGC +
Preference number: 4 (lower is better)
Translates to: YTVYTWSPPDMELWTAPQSTRPV*KRILGC
Trigger: GCATCCTAGAATACGTTTCCACACGGGTCTTGTGGA...TTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp CAGTCAGAAAGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCTCTCCAGCATGCCTTTaGAAGCCCTTCTTTATTGGG +
Preference number: 4 (lower is better)
Translates to: QSESSLPRSFTLDSCCPTSPACL*KPFFIG
Trigger: CCCAATAAAGAAGGGCTTCCAAAGGCATGCTGGAGA...GGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp CACATGACACATGAACATACACTGTGTACACCTGGAGCCCACCTGACATGGAGCCCCACCGATACATCTTaGCACACAAGAGTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: HMTHEHTLCTPGAHLTWSPTDTS*HTRVRP
Trigger: TGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGG...GCTCCATGTCAGGTGGGCTCCAGGTGTACACAGTGTATGTTCATGTGTCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp GCTTTACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTAGGATACTTTCAGGACTaGGTTGGGTCAGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ALHWTAAAPPIHLGTQELGYFQD*VGSASQ
Trigger: CTGACTGGCTGACCCAACCCAGTCCTGAAAGTATCC...TAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp AGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCGATACATCTGCACATAGAGCCTTTTaGACATCCCTGGTTGTAACC +
Preference number: 4 (lower is better)
Translates to: SSLPRSFTLDSCCPTDTSAHRAF*TSLVVT
Trigger: GGTTACAACCAGGGATGTTCAAAAGGCTCTATGTGC...AGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp GGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAGCTGACAATCTGGGCTaGCGAATGGACTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GSPSLLGNKYRVKQVGRPADNLG*RMDWWF
Trigger: GAACCACCAGTCCATTCGTCAGCCCAGATTGTCAGC...TGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp GGACTGAAGTACTCCCAGGTCCTTTTAGGTGAGGGATACTTTCAGGACTGGGTTCAACCAGGTGTTTGCTaGCAATCTGGGCTGACGAAT +
Preference number: 4 (lower is better)
Translates to: GLKYSQVLLGEGYFQDWVQPGVC*QSGLTN
Trigger: ATTCGTCAGCCCAGATTGTCAGCAAACACCTGGTTG...AACCCAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGGGAGTACTTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp GGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAGTGTCTCTGGCCCAATaGGGCTGTCAACTCCAACCA +
Preference number: 4 (lower is better)
Translates to: GSPSLLGNKYRVKQVGRPVSLAQ*GCQLQP
Trigger: TGGTTGGAGTTGACAGCCTCATTGGGCCAGAGACAC...TGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp GGACTGAAGTACTCCCAGGTCCTTTTAGGTGAGGGATACTTTCAGGACTGGGTTCCAGGTCCTTTTAGGTaGGGGATACTTTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: GLKYSQVLLGEGYFQDWVPGPFR*GILSGL
Trigger: CAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGG...AACCCAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGGGAGTACTTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp AATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAACCAGGTCCTTTTAGGTaGGGGATACTTTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: NTELNRWAGQHLWLWRPKPGPFR*GILSGL
Trigger: CAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGG...TTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp ACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGAATTAGGATAAGGGACTaGAGTACTCCCAGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: TELNRWAGQHLWLWRPKGIRIRD*STPRSF
Trigger: AAAGGACCTGGGAGTACTTCAGTCCCTTATCCTAAT...TCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp GGACTGAAGTACTCCCAGGTCCTTTTAGGTGAGGGATACTTTCAGGACTGGGTTCATGGAGCTTTGGACTaGTCCACAAGTCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GLKYSQVLLGEGYFQDWVHGALD*STSLQH
Trigger: ATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATG...AACCCAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGGGAGTACTTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp TACCACATGACACATGAACATACACTGTGTACACCTGGAGCCCACCTGACATGGGACTGGTGGTTCTTCTaGACAGAGAGCAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: YHMTHEHTLCTPGAHLTWDWWFF*TESRQQ
Trigger: TTGCTGTCTGCTCTCTGTCCAGAAGAACCACCAGTC...CCATGTCAGGTGGGCTCCAGGTGTACACAGTGTATGTTCATGTGTCATGTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp CTCAGAACTCAGATCTCCATGAGCTGGTCATTCCCCACGATCACCTCATTCACTGACTGGTGGTTCTTCTaGACAGAGAGCAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: LRTQISMSWSFPTITSFTDWWFF*TESRQQ
Trigger: TTGCTGTCTGCTCTCTGTCCAGAAGAACCACCAGTC...AGTGAATGAGGTGATCGTGGGGAATGACCAGCTCATGGAGATCTGAGTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp GGACTGAAGTACTCCCAGGTCCTTTTAGGTGAGGGATACTTTCAGGACTGGGTTTCCAATCTGTGTCTCTaGCCCAATGAGGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: GLKYSQVLLGEGYFQDWVSNLCL*PNEAVN
Trigger: GTTGACAGCCTCATTGGGCCAGAGACACAGATTGGA...AACCCAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGGGAGTACTTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp GAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAAGGAGCCCACCTGACATaGAGCTTTGGACTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: EALLYWEINTELNRWAGQGAHLT*SFGLLH
Trigger: GTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCC...TTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp CTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACTTACCACATGACACATaGACATACACTGTGTACACC +
Preference number: 4 (lower is better)
Translates to: LPRSFTLDSCCPTDTSWHLPHDT*TYTVYT
Trigger: GGTGTACACAGTGTATGTTCATGTGTCATGTGGTAA...GTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp CTGGGTTGGGTCAGCCAGTCAGAAAGTAGCCTTCCTAGGAGCTTTACATTGGACCGGGAACAGGTTCTATaGTATCTTGGCCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGWVSQSESSLPRSFTLDREQVL*YLGLFS
Trigger: TGAGAAAAGGCCAAGATAGCATAGAACCTGTTCCCG...GTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGACTGGCTGACCCAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp GCTTTACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTATTTACATTGGACAGCTaGTGCCCCACCGATACATCT +
Preference number: 4 (lower is better)
Translates to: ALHWTAAAPPIHLGTQELFTLDS*CPTDTS
Trigger: AGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAA...TAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp AAAGTAGCCTTCCTAGGAGCTTTACATTGGACAGCTGCTGCCCCACCGATACATTCCACAAGACCCGTGTaGAAACGTATTCTAGGATGC +
Preference number: 4 (lower is better)
Translates to: KVAFLGALHWTAAAPPIHSTRPV*KRILGC
Trigger: GCATCCTAGAATACGTTTCCACACGGGTCTTGTGGA...ATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGGAAGGCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp GTCTCCAGCATGCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAGGCCGAGAAACTCGATaGAACGCGCAGAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: VSSMPLEALLYWEINTELGRETR*NAQSRP
Trigger: GGGTCTGCTCTGCGCGTTCCATCGAGTTTCTCGGCC...TAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGCATGCTGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS-3UTR TCA 90 bp CTCAAATGTTTCTGTAGGATGGATCCCTTAATGACCAGCTCTTCATCCAAGTCTTGCTGTCCACTCCAATaGAGTCACGCTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LKCFCRMDPLMTSSSSKSCCPLQ*SHAAPL
Trigger: CAGTGGAGCAGCGTGACTTCATTGGAGTGGACAGCA...AGACTTGGATGAAGAGCTGGTCATTAAGGGATCCATCCTACAGAAACATTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR TCA 90 bp GGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCACAATCAAGCAGTCCTTaGTGTCTGCACCCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: GSPSLLGNKYRVKQVGRPQSSSP*CLHPSR
Trigger: TCGAGAAGGGTGCAGACATCAAGGACTGCTTGATTG...TGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS-3UTR TCA 90 bp ATGCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGCACCTGGAGCCCACCTaGCATGGAGCTTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: MPLEALLYWEINTELNRWHLEPT*HGALDC
Trigger: GCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTG...CCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR GCA 90 bp TCCAAGTCTGCTTCATTAGCCATGAAGAGCAGCCTCTTTCCTGTGCTGTCCACTAGATCCTCCACCTACTaGCATCACTACTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SKSASLAMKSSLFPVLSTRSSTY*HHYCLK
Trigger: TTTCAAGCAGTAGTGATGGCAGTAGGTGGAGGATCT...AGTGGACAGCACAGGAAAGAGGCTGCTCTTCATGGCTAATGAAGCAGACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR GCA 90 bp GGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAGTAGCGCAAAGAATCTaGAGTTCCCATGTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: GSPSLLGNKYRVKQVGRPVAQRI*SSHVSV
Trigger: GACGCTGACATGGGAACTGCAGATTCTTTGCGCTAC...TGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp ACACCCACGTTCACTGCAGCACTATTCACAATAGCCAAGAGGTGGCAGCAACTCCTCTTCATCCAAGTCTaGTTCATTAGCCATGAAGAG +
Preference number: 4 (lower is better)
Translates to: TPTFTAALFTIAKRWQQLLFIQV*FISHEE
Trigger: CTCTTCATGGCTAATGAAGCAGACTTGGATGAAGAG...GAGTTGCTGCCACCTCTTGGCTATTGTGAATAGTGCTGCAGTGAACGTGGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR CCA 90 bp GAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGGAGGTTTGGGAATGCTaGAAGTTAGGTCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: EINTELNRWAGQHLWLWREVWEC*KLGLSS
Trigger: GGATGACAGACCTAACTTCCAGCATTCCCAAACCTC...CCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp GGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAGACTGGTGGTTCTTCTaGACAGAGAGCAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: GSPSLLGNKYRVKQVGRPDWWFF*TESRQQ
Trigger: TTGCTGTCTGCTCTCTGTCCAGAAGAACCACCAGTC...TGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp TGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGCAACATCTGTGGCTTTaGAGGCCAAAAGGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: WEINTELNRWAGQHLWLWQHLWL*RPKGRS
Trigger: ACTCCTTCCTTTTGGCCTCCAAAGCCACAGATGTTG...CCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp CTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCCTGACATGGAGCTTTaGACTGCTCCACAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LYWEINTELNRWAGQHLWPDMEL*TAPQVS
Trigger: GGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGG...CCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp CACTGCAGCACTATTCACAATAGCCAAGAGGTGGCAGCAACTCAAATGTTTCTGGCACATAGAGCCTTTTaGACATCCCTGGTTGTAACC +
Preference number: 4 (lower is better)
Translates to: HCSTIHNSQEVAATQMFLAHRAF*TSLVVT
Trigger: GGTTACAACCAGGGATGTTCAAAAGGCTCTATGTGC...CAGAAACATTTGAGTTGCTGCCACCTCTTGGCTATTGTGAATAGTGCTGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR TCA 90 bp GAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGTTCCTCCACAGTGACTaGGTTCATGAGAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: EINTELNRWAGQHLWLWRFLHSD*VHEKAI
Trigger: AATTGCCTTCTCATGAACTCAGTCACTGTGGAGGAA...CCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp GGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCACAGCATTGTTGCAGATaGCACTGCCTTGGATATTGC +
Preference number: 4 (lower is better)
Translates to: GSPSLLGNKYRVKQVGRPQHCCR*HCLGYC
Trigger: GCAATATCCAAGGCAGTGTCATCTGCAACAATGCTG...TGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS-3UTR TCA 90 bp GAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGATTAGGATAAGGGACTaGAGTACTCCCAGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: EINTELNRWAGQHLWLWRIRIRD*STPRSF
Trigger: AAAGGACCTGGGAGTACTTCAGTCCCTTATCCTAAT...CCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp TTCATCCAAGTCTGCTTCATTAGCCATGAAGAGCAGCCTCTTTCCTGTGCTGTCCGGGAACAGGTTCTATaGTATCTTGGCCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FIQVCFISHEEQPLSCAVREQVL*YLGLFS
Trigger: TGAGAAAAGGCCAAGATAGCATAGAACCTGTTCCCG...GACAGCACAGGAAAGAGGCTGCTCTTCATGGCTAATGAAGCAGACTTGGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR GCA 90 bp GCTTTACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTACTCTTCATCCAAGTCTaGTTCATTAGCCATGAAGAG +
Preference number: 4 (lower is better)
Translates to: ALHWTAAAPPIHLGTQELLFIQV*FISHEE
Trigger: CTCTTCATGGCTAATGAAGCAGACTTGGATGAAGAG...TAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp TGTAGGATGGATCCCTTAATGACCAGCTCTTCATCCAAGTCTGCTTCATTAGCCGAGGTTTGGGAATGCTaGAAGTTAGGTCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: CRMDPLMTSSSSKSASLAEVWEC*KLGLSS
Trigger: GGATGACAGACCTAACTTCCAGCATTCCCAAACCTC...GGCTAATGAAGCAGACTTGGATGAAGAGCTGGTCATTAAGGGATCCATCCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR CCA 90 bp TCCCACACACTTGCTCCAGATGATCTTTACCACATGACACATGAACATACACTGATCTGGGCTGACGAATaGACTGGTGGTTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SHTLAPDDLYHMTHEHTLIWADE*TGGSSG
Trigger: TCCAGAAGAACCACCAGTCCATTCGTCAGCCCAGAT...CAGTGTATGTTCATGTGTCATGTGGTAAAGATCATCTGGAGCAAGTGTGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp GCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCAGATCTCCATGAGCTaGTCATTCCCCACGATCACC +
Preference number: 4 (lower is better)
Translates to: AFGSPSLLGNKYRVKQVGQISMS*SFPTIT
Trigger: GGTGATCGTGGGGAATGACCAGCTCATGGAGATCTG...GCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp CACACACTTGCTCCAGATGATCTTTACCACATGACACATGAACATACACTGTGTCCTGACATGGAGCTTTaGACTGCTCCACAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: HTLAPDDLYHMTHEHTLCPDMEL*TAPQVS
Trigger: GGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGG...ACACAGTGTATGTTCATGTGTCATGTGGTAAAGATCATCTGGAGCAAGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp ATGCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGGAGCCCACCTGACATaGAGCTTTGGACTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: MPLEALLYWEINTELNRWGAHLT*SFGLLH
Trigger: GTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCC...CCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp CACACACTTGCTCCAGATGATCTTTACCACATGACACATGAACATACACTGTGTGGATACTTTCAGGACTaGGTTGGGTCAGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: HTLAPDDLYHMTHEHTLCGYFQD*VGSASQ
Trigger: CTGACTGGCTGACCCAACCCAGTCCTGAAAGTATCC...ACACAGTGTATGTTCATGTGTCATGTGGTAAAGATCATCTGGAGCAAGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp TTCACTGCAGCACTATTCACAATAGCCAAGAGGTGGCAGCAACTCAAATGTTTCCTGAAAGCAAGGTCTTaGAGAGATGTCTGTACACCC +
Preference number: 4 (lower is better)
Translates to: FTAALFTIAKRWQQLKCFLKARS*RDVCTP
Trigger: GGGTGTACAGACATCTCTTCAAGACCTTGCTTTCAG...GAAACATTTGAGTTGCTGCCACCTCTTGGCTATTGTGAATAGTGCTGCAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR GCA 90 bp CTCAAATGTTTCTGTAGGATGGATCCCTTAATGACCAGCTCTTCATCCAAGTCTGTAGCGCAAAGAATCTaGAGTTCCCATGTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LKCFCRMDPLMTSSSSKSVAQRI*SSHVSV
Trigger: GACGCTGACATGGGAACTGCAGATTCTTTGCGCTAC...AGACTTGGATGAAGAGCTGGTCATTAAGGGATCCATCCTACAGAAACATTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR GCA 90 bp AGCATGCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGTAGAGTCCCAGTGTaGTCACTCGAGAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SMPLEALLYWEINTELNRCRVPV*SLESRA
Trigger: GGCTCTGCTCTCGAGTGAGCACACTGGGACTCTACA...CCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR GCA 90 bp TTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTGGAAGGAGTCTGACTTaGTCAGAACTCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: LLGNKYRVKQVGRPTSVAGRSLT*SELRSP
Trigger: TGGAGATCTGAGTTCTGAGCAAGTCAGACTCCTTCC...AGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp TGTAGGATGGATCCCTTAATGACCAGCTCTTCATCCAAGTCTGCTTCATTAGCCAGGTTTGTTCCCAACTaGAAGCAGAGGTTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: CRMDPLMTSSSSKSASLARFVPN*KQRFGN
Trigger: ATTCCCAAACCTCTGCTTCCAGTTGGGAACAAACCT...GGCTAATGAAGCAGACTTGGATGAAGAGCTGGTCATTAAGGGATCCATCCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR CCA 90 bp TTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTCCACAAGACCCGTGTaGAAACGTATTCTAGGATGC +
Preference number: 4 (lower is better)
Translates to: LLGNKYRVKQVGRPTSVASTRPV*KRILGC
Trigger: GCATCCTAGAATACGTTTCCACACGGGTCTTGTGGA...AGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp CTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGATCTGGGCTGACGAATaGACTGGTGGTTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LLYWEINTELNRWAGQHLIWADE*TGGSSG
Trigger: TCCAGAAGAACCACCAGTCCATTCGTCAGCCCAGAT...CAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp GAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAATCTCCAGCATGCCTTTaGAAGCCCTTCTTTATTGGG +
Preference number: 4 (lower is better)
Translates to: EALLYWEINTELNRWAGQSPACL*KPFFIG
Trigger: CCCAATAAAGAAGGGCTTCCAAAGGCATGCTGGAGA...TTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp GCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCTTTCAGGACTGGGTTaGGTCAGCCAGTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: AFGSPSLLGNKYRVKQVGLSGLG*VSQSES
Trigger: ACTTTCTGACTGGCTGACCCAACCCAGTCCTGAAAG...GCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp CAGCTCTTCATCCAAGTCTGCTTCATTAGCCATGAAGAGCAGCCTCTTTCCTGTACAATAGCCAAGAGGTaGCAGCAACTCAAATGTTTC +
Preference number: 4 (lower is better)
Translates to: QLFIQVCFISHEEQPLSCTIAKR*QQLKCF
Trigger: GAAACATTTGAGTTGCTGCCACCTCTTGGCTATTGT...ACAGGAAAGAGGCTGCTCTTCATGGCTAATGAAGCAGACTTGGATGAAGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR TCA 90 bp GCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCGCACATAGAGCCTTTTaGACATCCCTGGTTGTAACC +
Preference number: 4 (lower is better)
Translates to: AFGSPSLLGNKYRVKQVGAHRAF*TSLVVT
Trigger: GGTTACAACCAGGGATGTTCAAAAGGCTCTATGTGC...GCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp TTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTCAAAAGGAAGGAGTCTaGCTTGCTCAGAACTCAGAT +
Preference number: 4 (lower is better)
Translates to: LLGNKYRVKQVGRPTSVAQKEGV*LAQNSD
Trigger: ATCTGAGTTCTGAGCAAGTCAGACTCCTTCCTTTTG...AGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp CTTGCTCAGAACTCAGATCTCCATGAGCTGGTCATTCCCCACGATCACCTCATTATGATCTTTACCACATaGCACATGAACATACACTGT +
Preference number: 4 (lower is better)
Translates to: LAQNSDLHELVIPHDHLIMIFTT*HMNIHC
Trigger: ACAGTGTATGTTCATGTGTCATGTGGTAAAGATCAT...AATGAGGTGATCGTGGGGAATGACCAGCTCATGGAGATCTGAGTTCTGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS-3UTR TCA 90 bp TCCAAGTCTGCTTCATTAGCCATGAAGAGCAGCCTCTTTCCTGTGCTGTCCACTTATATCCAAAAGAACTaGAAGCAAGGTCTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SKSASLAMKSSLFPVLSTYIQKN*KQGLEE
Trigger: CTCTTCAAGACCTTGCTTTCAGTTCTTTTGGATATA...AGTGGACAGCACAGGAAAGAGGCTGCTCTTCATGGCTAATGAAGCAGACTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR GCA 90 bp ACACCCACGTTCACTGCAGCACTATTCACAATAGCCAAGAGGTGGCAGCAACTCTACTGCCATCACTACTaGTTGAAATTCCATTTTTAC +
Preference number: 4 (lower is better)
Translates to: TPTFTAALFTIAKRWQQLYCHHY*LKFHFY
Trigger: GTAAAAATGGAATTTCAAGCAGTAGTGATGGCAGTA...GAGTTGCTGCCACCTCTTGGCTATTGTGAATAGTGCTGCAGTGAACGTGGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR GCA 90 bp GCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCGGAAGGAGTCTGACTTaGTCAGAACTCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: AFGSPSLLGNKYRVKQVGGRSLT*SELRSP
Trigger: TGGAGATCTGAGTTCTGAGCAAGTCAGACTCCTTCC...GCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp TTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTAGGTTTGTTCCCAACTaGAAGCAGAGGTTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LLGNKYRVKQVGRPTSVARFVPN*KQRFGN
Trigger: ATTCCCAAACCTCTGCTTCCAGTTGGGAACAAACCT...AGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp CTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTTGGCTTCAATCCTCTaGCCACTTCCAATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LLYWEINTELNRWAGQHLLASIL*PLPIKQ
Trigger: CTGCTTGATTGGAAGTGGCCAGAGGATTGAAGCCAA...CAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS-3UTR CCA 90 bp GCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCAACATCTGTGGCTTTaGAGGCCAAAAGGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: AFGSPSLLGNKYRVKQVGQHLWL*RPKGRS
Trigger: ACTCCTTCCTTTTGGCCTCCAAAGCCACAGATGTTG...GCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CCA 90 bp TTCATCCAAGTCTGCTTCATTAGCCATGAAGAGCAGCCTCTTTCCTGTGCTGTCGCTCTTATGCACTGTTaGTGGGATTGTAAAATAGTG +
Preference number: 4 (lower is better)
Translates to: FIQVCFISHEEQPLSCAVALMHC*WDCKIV
Trigger: CACTATTTTACAATCCCACCAACAGTGCATAAGAGC...GACAGCACAGGAAAGAGGCTGCTCTTCATGGCTAATGAAGCAGACTTGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR TCA 90 bp ATGCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGCAACCAGGTGTTTGCTaGCAATCTGGGCTGACGAAT +
Preference number: 4 (lower is better)
Translates to: MPLEALLYWEINTELNRWQPGVC*QSGLTN
Trigger: ATTCGTCAGCCCAGATTGTCAGCAAACACCTGGTTG...CCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp TTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGTTCCTCCACAGTGACTaGGTTCATGAGAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: FGSPSLLGNKYRVKQVGRFLHSD*VHEKAI
Trigger: AATTGCCTTCTCATGAACTCAGTCACTGTGGAGGAA...CCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp GCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCAAAAGGAAGGAGTCTaGCTTGCTCAGAACTCAGAT +
Preference number: 4 (lower is better)
Translates to: AFGSPSLLGNKYRVKQVGQKEGV*LAQNSD
Trigger: ATCTGAGTTCTGAGCAAGTCAGACTCCTTCCTTTTG...GCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR TCA 90 bp TGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGATGATCTTTACCACATaGCACATGAACATACACTGT +
Preference number: 4 (lower is better)
Translates to: WEINTELNRWAGQHLWLWMIFTT*HMNIHC
Trigger: ACAGTGTATGTTCATGTGTCATGTGGTAAAGATCAT...CCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp GCTCCAGATGATCTTTACCACATGACACATGAACATACACTGTGTACACCTGGACTCTTCATCCAAGTCTaGTTCATTAGCCATGAAGAG +
Preference number: 4 (lower is better)
Translates to: APDDLYHMTHEHTLCTPGLFIQV*FISHEE
Trigger: CTCTTCATGGCTAATGAAGCAGACTTGGATGAAGAG...TCCAGGTGTACACAGTGTATGTTCATGTGTCATGTGGTAAAGATCATCTGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp TGTAGGATGGATCCCTTAATGACCAGCTCTTCATCCAAGTCTGCTTCATTAGCCCATCAACATAGCAAGTaGTGCATCATAAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: CRMDPLMTSSSSKSASLAHQHSK*CIISSK
Trigger: TTTAGAGCTTATGATGCATCACTTGCTATGTTGATG...GGCTAATGAAGCAGACTTGGATGAAGAGCTGGTCATTAAGGGATCCATCCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR TCA 90 bp CACACACTTGCTCCAGATGATCTTTACCACATGACACATGAACATACACTGTGTTTACCACATGACACATaGACATACACTGTGTACACC +
Preference number: 4 (lower is better)
Translates to: HTLAPDDLYHMTHEHTLCLPHDT*TYTVYT
Trigger: GGTGTACACAGTGTATGTTCATGTGTCATGTGGTAA...ACACAGTGTATGTTCATGTGTCATGTGGTAAAGATCATCTGGAGCAAGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp GAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGTACTGCCATCACTACTaGTTGAAATTCCATTTTTAC +
Preference number: 4 (lower is better)
Translates to: EINTELNRWAGQHLWLWRYCHHY*LKFHFY
Trigger: GTAAAAATGGAATTTCAAGCAGTAGTGATGGCAGTA...CCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR TCA 90 bp CTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCATCAACATAGCAAGTaGTGCATCATAAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: LYWEINTELNRWAGQHLWHQHSK*CIISSK
Trigger: TTTAGAGCTTATGATGCATCACTTGCTATGTTGATG...CCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR GCA 90 bp AGCATGCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGCGGGAACAGGTTCTATaGTATCTTGGCCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SMPLEALLYWEINTELNRREQVL*YLGLFS
Trigger: TGAGAAAAGGCCAAGATAGCATAGAACCTGTTCCCG...CCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGCATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
3UTR CAA 72 bp TCTAAATATATATCCAAAAGAACTGAAAGCAAGGTCTaGAAGAGATGTCTGTACACCCACGTTCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SKYISKRTESKV*KRCLYTHVHCS
Trigger: GCTGCAGTGAACGTGGGTGTACAGACATCTCTTCAAGACCTTGCTTTCAGTTCTTTTGGATATATATTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR GCA 90 bp GCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCTACTGCCATCACTACTaGTTGAAATTCCATTTTTAC +
Preference number: 4 (lower is better)
Translates to: AFGSPSLLGNKYRVKQVGYCHHY*LKFHFY
Trigger: GTAAAAATGGAATTTCAAGCAGTAGTGATGGCAGTA...GCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CCA 90 bp CTCAAATGTTTCTGTAGGATGGATCCCTTAATGACCAGCTCTTCATCCAAGTCTCTTATGCACTGTTGGTaGGATTGTAAAATAGTGAAA +
Preference number: 4 (lower is better)
Translates to: LKCFCRMDPLMTSSSSKSLMHCW*DCKIVK
Trigger: TTTCACTATTTTACAATCCCACCAACAGTGCATAAG...AGACTTGGATGAAGAGCTGGTCATTAAGGGATCCATCCTACAGAAACATTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS TCA 90 bp CTCCCGGCACGCCGCAACCGCTCCCAGCGATCTCCACGCCGCCTCTaGCTGACAGCCCAATGGCGCAGGCGCGCGATGGCCGAGAAACTC +
Preference number: 5 (lower is better)
Translates to: LPARRNRSQRSPRRL*LTAQWRRRAMAEKL
Trigger: GAGTTTCTCGGCCATCGCGCGCCTGCGCCATTGGGCTGTCAGTCAGAGGCGGCGTGGAGATCGCTGGGAGCGGTTGCGGCGTGCCGGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS TCA 90 bp CGGCACGCCGCAACCGCTCCCAGCGATCTCCACGCCGCCTCTGACTaGCAGCCCAATGGCGCAGGCGCGCGATGGCCGAGAAACTCGATG +
Preference number: 5 (lower is better)
Translates to: RHAATAPSDLHAASD*QPNGAGARWPRNSM
Trigger: CATCGAGTTTCTCGGCCATCGCGCGCCTGCGCCATTGGGCTGTCAGTCAGAGGCGGCGTGGAGATCGCTGGGAGCGGTTGCGGCGTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS CCA 90 bp ACTGACAGCCCAATGGCGCAGGCGCGCGATGGCCGAGAAACTCGATaGAACGCGCAGAGCAGACCCATGGAGAAGAGAAGACCGCCGAGC +
Preference number: 5 (lower is better)
Translates to: TDSPMAQARDGRETR*NAQSRPMEKRRPPS
Trigger: GCTCGGCGGTCTTCTCTTCTCCATGGGTCTGCTCTGCGCGTTCCATCGAGTTTCTCGGCCATCGCGCGCCTGCGCCATTGGGCTGTCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS CCA 90 bp CGCGCGATGGCCGAGAAACTCGATGGAACGCGCAGAGCAGACCCATaGAGAAGAGAAGACCGCCGAGCGATGGATGACGGAGGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: RAMAEKLDGTRRADP*RREDRRAMDDGGEA
Trigger: TGCTTCCCCTCCGTCATCCATCGCTCGGCGGTCTTCTCTTCTCCATGGGTCTGCTCTGCGCGTTCCATCGAGTTTCTCGGCCATCGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS CCA 90 bp GAAATTCCATTTTTACAAACCGGGTCAGCCAGCTTGTGTGCGGCCTaGCAGGGCAGAAGTCACAGCTATAACTCAGCTCCCGGCACGCCG +
Preference number: 5 (lower is better)
Translates to: EIPFLQTGSASLCAA*QGRSHSYNSAPGTP
Trigger: CGGCGTGCCGGGAGCTGAGTTATAGCTGTGACTTCTGCCCTGCCAGGCCGCACACAAGCTGGCTGACCCGGTTTGTAAAAATGGAATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360403.7
ENST00000372182.6
ENST00000372183.7
ENST00000477953.5
ENST00000480675.5
ENST00000487532.5
ENST00000497010.1
ENST00000620860.4
CDS-3UTR CAA 90 bp TGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCATGGGCACCTGTCTGTTaGCTTCCATGTAGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: CTPGAHLTWSFGLLHKSPWAPVC*LPCRVP
Trigger: TGGGACTCTACATGGAAGCAAACAGACAGGTGCCCA...TGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CAA 90 bp GGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTAGAGCAGACAGCAATTaGGGCACCTGTCTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: GAHLTWSFGLLHKSPACLRADSN*GTCLFA
Trigger: AGCAAACAGACAGGTGCCCAAATTGCTGTCTGCTCT...AAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CAA 90 bp TACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCAGGAAGGAGTCTGACTaGCTCAGAACTCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: YTWSPPDMELWTAPQVSSRKESD*LRTQIS
Trigger: GGAGATCTGAGTTCTGAGCAAGTCAGACTCCTTCCT...GCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CAA 90 bp GGAGCTTTACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTGGGCACCTGTCTGTTaGCTTCCATGTAGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: GALHWTAAAPPIHLGTQEWAPVC*LPCRVP
Trigger: TGGGACTCTACATGGAAGCAAACAGACAGGTGCCCA...CTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CAA 90 bp TACTCCCAGGTCCTTTTAGGTGAGGGATACTTTCAGGACTGGGTTGGGTCAGCCACTCCAACCAGGTGTTaGCTGACAATCTGGGCTGAC +
Preference number: 5 (lower is better)
Translates to: YSQVLLGEGYFQDWVGSATPTRC*LTIWAD
Trigger: GTCAGCCCAGATTGTCAGCAAACACCTGGTTGGAGT...GGCTGACCCAACCCAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CAA 90 bp CCACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTGGAAACTCCAACCAGGTGTTaGCTGACAATCTGGGCTGAC +
Preference number: 5 (lower is better)
Translates to: PPDMELWTAPQVSSMPLETPTRC*LTIWAD
Trigger: GTCAGCCCAGATTGTCAGCAAACACCTGGTTGGAGT...TTCCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CAA 90 bp TACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGAGAGCAGACAGCAATTaGGGCACCTGTCTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: YRVKQVGRPTSVALEAKRRADSN*GTCLFA
Trigger: AGCAAACAGACAGGTGCCCAAATTGCTGTCTGCTCT...CCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CAA 90 bp TACACTGTGTACACCTGGAGCCCACCTGACATGGAGCTTTGGACTGCTCCACAAAGGAAGGAGTCTGACTaGCTCAGAACTCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: YTVYTWSPPDMELWTAPQRKESD*LRTQIS
Trigger: GGAGATCTGAGTTCTGAGCAAGTCAGACTCCTTCCT...TTGTGGAGCAGTCCAAAGCTCCATGTCAGGTGGGCTCCAGGTGTACACAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS GCA 90 bp GGCTTCAATCCTCTGGCCACTTCCAATCAAGCAGTCCTTGATGTCTaGACCCTTCTCGATCACAGCATTGTTGCAGATGACACTGCCTTG +
Preference number: 5 (lower is better)
Translates to: GFNPLATSNQAVLDV*TLLDHSIVADDTAL
Trigger: CAAGGCAGTGTCATCTGCAACAATGCTGTGATCGAGAAGGGTGCAGACATCAAGGACTGCTTGATTGGAAGTGGCCAGAGGATTGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS-3UTR CAA 90 bp CAGAACTCAGATCTCCATGAGCTGGTCATTCCCCACGATCACCTCATTCACTCGAGGAAGGAGTCTGACTaGCTCAGAACTCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: QNSDLHELVIPHDHLIHSRKESD*LRTQIS
Trigger: GGAGATCTGAGTTCTGAGCAAGTCAGACTCCTTCCT...CGAGTGAATGAGGTGATCGTGGGGAATGACCAGCTCATGGAGATCTGAGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CAA 90 bp AATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAAGAGCAGACAGCAATTaGGGCACCTGTCTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: NTELNRWAGQHLWLWRPKRADSN*GTCLFA
Trigger: AGCAAACAGACAGGTGCCCAAATTGCTGTCTGCTCT...TTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CAA 90 bp GCTTTACATTGGACAGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTAGCAGATGACACTGCCTaGGATATTGCTTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ALHWTAAAPPIHLGTQELADDTA*DIASFL
Trigger: GAGGAAGGAAGCAATATCCAAGGCAGTGTCATCTGC...TAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCTGTCCAATGTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS-3UTR CAA 90 bp GGACTGAAGTACTCCCAGGTCCTTTTAGGTGAGGGATACTTTCAGGACTGGGTTTCGATCACAGCATTGTaGCAGATGACACTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: GLKYSQVLLGEGYFQDWVSITAL*QMTLPW
Trigger: CCAAGGCAGTGTCATCTGCAACAATGCTGTGATCGA...AACCCAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGGGAGTACTTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS CCA 90 bp AAAAGGAAGGAGTCTGACTTGCTCAGAACTCAGATCTCCATGAGCTaGTCATTCCCCACGATCACCTCATTCACTCGTTTAGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: KRKESDLLRTQISMS*SFPTITSFTRLAFL
Trigger: GAGGAAGGCTAAACGAGTGAATGAGGTGATCGTGGGGAATGACCAGCTCATGGAGATCTGAGTTCTGAGCAAGTCAGACTCCTTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CAA 90 bp AGCTGCTGCCCCACCGATACATCTTGGCACACAAGAGTTAGGCCACTGTATCTGGGCTTCATTTTCATCTaGAATTCTGCACATAGAGCC +
Preference number: 5 (lower is better)
Translates to: SCCPTDTSWHTRVRPLYLGFIFI*NSAHRA
Trigger: GGCTCTATGTGCAGAATTCAAGATGAAAATGAAGCC...CAGATACAGTGGCCTAACTCTTGTGTGCCAAGATGTATCGGTGGGGCAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CAA 90 bp GAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGACACTGCCTTGGATATaGCTTCCTTCCTCCACAGTG +
Preference number: 5 (lower is better)
Translates to: EINTELNRWAGQHLWLWRTLPWI*LPSSTV
Trigger: CACTGTGGAGGAAGGAAGCAATATCCAAGGCAGTGT...CCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS-3UTR CAA 90 bp CACACACTTGCTCCAGATGATCTTTACCACATGACACATGAACATACACTGTGTCCTAGGAGCTTTACATaGGACAGCTGCTGCCCCACC +
Preference number: 5 (lower is better)
Translates to: HTLAPDDLYHMTHEHTLCPRSFT*DSCCPT
Trigger: GGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGG...ACACAGTGTATGTTCATGTGTCATGTGGTAAAGATCATCTGGAGCAAGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS GCA 90 bp ACCAAATTAAAGGTTTGTTCCCAACTGGAAGCAGAGGTTTGGGAATaGTGGAAGTTAGGTCTGTCATCCGAGATCCTCCACCTACTGCCA +
Preference number: 5 (lower is better)
Translates to: TKLKVCSQLEAEVWE*WKLGLSSEILHLLP
Trigger: TGGCAGTAGGTGGAGGATCTCGGATGACAGACCTAACTTCCAGCATTCCCAAACCTCTGCTTCCAGTTGGGAACAAACCTTTAATTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360403.7
ENST00000372182.6
ENST00000372183.7
ENST00000477953.5
ENST00000480675.5
ENST00000487532.5
ENST00000497010.1
ENST00000620860.4
CDS CCA 90 bp AAAAGGAAGGAGTCTGACTTGCTCAGAACTCAGATCTCCATGAGCTaGTCATTCCCCACGATCACCTCATTCACTCGTTTAGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: KRKESDLLRTQISMS*SFPTITSFTRLALA
Trigger: AGCCAAAGCTAAACGAGTGAATGAGGTGATCGTGGGGAATGACCAGCTCATGGAGATCTGAGTTCTGAGCAAGTCAGACTCCTTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS-3UTR CAA 90 bp GAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAATGGGCACCTGTCTGTTaGCTTCCATGTAGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: EALLYWEINTELNRWAGQWAPVC*LPCRVP
Trigger: TGGGACTCTACATGGAAGCAAACAGACAGGTGCCCA...TTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CAA 90 bp TTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTCCAATCAAGCAGTCCTaGATGTCTGCACCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: LLGNKYRVKQVGRPTSVAPIKQS*MSAPFS
Trigger: CGAGAAGGGTGCAGACATCAAGGACTGCTTGATTGG...AGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS-3UTR CAA 90 bp GGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCATCCTGTCCCACACACTaGCTCCAGATGATCTTTACC +
Preference number: 5 (lower is better)
Translates to: GSPSLLGNKYRVKQVGRPSCPTH*LQMIFT
Trigger: GGTAAAGATCATCTGGAGCAAGTGTGTGGGACAGGA...TGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CAA 90 bp AGAGTTAAACAGGTGGGCCGGCCAACATCTGTGGCTTTGGAGGCCAAAAGGAAGGGAAGCCCTTCTTTATaGGGAAATAAATACAGAGTT +
Preference number: 5 (lower is better)
Translates to: RVKQVGRPTSVALEAKRKGSPSL*GNKYRV
Trigger: AACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC...CTTCCTTTTGGCCTCCAAAGCCACAGATGTTGGCCGGCCCACCTGTTTAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CAA 90 bp CACCTGACATGGAGCTTTGGACTGCTCCACAAGTCTCCAGCATGCCTTTGGAAGGGAAGCCCTTCTTTATaGGGAAATAAATACAGAGTT +
Preference number: 5 (lower is better)
Translates to: HLTWSFGLLHKSPACLWKGSPSL*GNKYRV
Trigger: AACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC...CTTCCAAAGGCATGCTGGAGACTTGTGGAGCAGTCCAAAGCTCCATGTCAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CAA 90 bp GAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAATCCTGTCCCACACACTaGCTCCAGATGATCTTTACC +
Preference number: 5 (lower is better)
Translates to: EALLYWEINTELNRWAGQSCPTH*LQMIFT
Trigger: GGTAAAGATCATCTGGAGCAAGTGTGTGGGACAGGA...TTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CAA 90 bp ATGCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGCCTAGGAGCTTTACATaGGACAGCTGCTGCCCCACC +
Preference number: 5 (lower is better)
Translates to: MPLEALLYWEINTELNRWPRSFT*DSCCPT
Trigger: GGTGGGGCAGCAGCTGTCCAATGTAAAGCTCCTAGG...CCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CAA 90 bp TTCATCCAAGTCTGCTTCATTAGCCATGAAGAGCAGCCTCTTTCCTGTGCTGTCACTGAAAGCAAGGTCTaGAAGAGATGTCTGTACACC +
Preference number: 5 (lower is better)
Translates to: FIQVCFISHEEQPLSCAVTESKV*KRCLYT
Trigger: GGTGTACAGACATCTCTTCAAGACCTTGCTTTCAGT...GACAGCACAGGAAAGAGGCTGCTCTTCATGGCTAATGAAGCAGACTTGGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR CAA 90 bp CAGCTCTTCATCCAAGTCTGCTTCATTAGCCATGAAGAGCAGCCTCTTTCCTGTGGCTTCATTTTCATCTaGAATTCTGCACATAGAGCC +
Preference number: 5 (lower is better)
Translates to: QLFIQVCFISHEEQPLSCGFIFI*NSAHRA
Trigger: GGCTCTATGTGCAGAATTCAAGATGAAAATGAAGCC...ACAGGAAAGAGGCTGCTCTTCATGGCTAATGAAGCAGACTTGGATGAAGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR CAA 90 bp GGACTGAAGTACTCCCAGGTCCTTTTAGGTGAGGGATACTTTCAGGACTGGGTTAGGTTCTATGCTATCTaGGCCTTTTCTCATCAACAT +
Preference number: 5 (lower is better)
Translates to: GLKYSQVLLGEGYFQDWVRFYAI*AFSHQH
Trigger: ATGTTGATGAGAAAAGGCCAAGATAGCATAGAACCT...AACCCAGTCCTGAAAGTATCCCTCACCTAAAAGGACCTGGGAGTACTTCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CAA 90 bp TCCCACACACTTGCTCCAGATGATCTTTACCACATGACACATGAACATACACTGTTCTCGATCACAGCATaGTTGCAGATGACACTGCCT +
Preference number: 5 (lower is better)
Translates to: SHTLAPDDLYHMTHEHTLFSITA*LQMTLP
Trigger: AGGCAGTGTCATCTGCAACAATGCTGTGATCGAGAA...CAGTGTATGTTCATGTGTCATGTGGTAAAGATCATCTGGAGCAAGTGTGTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS-3UTR CAA 90 bp CTGGGTTGGGTCAGCCAGTCAGAAAGTAGCCTTCCTAGGAGCTTTACATTGGACGGAAGCCCTTCTTTATaGGGAAATAAATACAGAGTT +
Preference number: 5 (lower is better)
Translates to: LGWVSQSESSLPRSFTLDGSPSL*GNKYRV
Trigger: AACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCC...GTCCAATGTAAAGCTCCTAGGAAGGCTACTTTCTGACTGGCTGACCCAACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS TCA 90 bp CCTCAAGTGGGTACAGGGGGAAACATACCCTTCCTCCACAGTGACTaGGTTCATGAGAAGGCAATTGGTAATAGTCACTCTATCTTTTAT +
Preference number: 5 (lower is better)
Translates to: PQVGTGGNIPFLHSD*VHEKAIGNSHSIFY
Trigger: ATAAAAGATAGAGTGACTATTACCAATTGCCTTCTCATGAACTCAGTCACTGTGGAGGAAGGGTATGTTTCCCCCTGTACCCACTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372183.7
CDS GCA 90 bp GCTGAGGGCCATCTTAAGTTTTGGATATATGTAGCGCAAAGAATCTaGAGTTCCCATGTCAGCGTCATCAGGAATACACACAATATCTGG +
Preference number: 5 (lower is better)
Translates to: AEGHLKFWIYVAQRI*SSHVSVIRNTHNIW
Trigger: CCAGATATTGTGTGTATTCCTGATGACGCTGACATGGGAACTGCAGATTCTTTGCGCTACATATATCCAAAACTTAAGATGGCCCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487532.5
CDS-3UTR CAA 90 bp CAGCTCTTCATCCAAGTCTGCTTCATTAGCCATGAAGAGCAGCCTCTTTCCTGTTACCAAATTAAAGGTTaGTTCCCAACTGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: QLFIQVCFISHEEQPLSCYQIKG*FPTGSR
Trigger: TCTGCTTCCAGTTGGGAACAAACCTTTAATTTGGTA...ACAGGAAAGAGGCTGCTCTTCATGGCTAATGAAGCAGACTTGGATGAAGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR CAA 90 bp ATGCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGACTCCAACCAGGTGTTaGCTGACAATCTGGGCTGAC +
Preference number: 5 (lower is better)
Translates to: MPLEALLYWEINTELNRWTPTRC*LTIWAD
Trigger: GTCAGCCCAGATTGTCAGCAAACACCTGGTTGGAGT...CCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360403.7
ENST00000439363.5
ENST00000620860.4
CDS-3UTR CAA 90 bp CTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGCCAACATCTGTTCACTCGTTTAGCTTaGGCTTCAATCCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: LLYWEINTELNRWAGQHLFTRLA*ASILWP
Trigger: TGGCCAGAGGATTGAAGCCAAAGCTAAACGAGTGAA...CAGATGTTGGCCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS GCA 90 bp TTGCACTCCAGCCTTAAGTTTTGGATATATGTAGCGCAAAGAATCTaGAGTTCCCATGTCAGCGTCATCAGGAATACACACAATATCTGG +
Preference number: 5 (lower is better)
Translates to: LHSSLKFWIYVAQRI*SSHVSVIRNTHNIW
Trigger: CCAGATATTGTGTGTATTCCTGATGACGCTGACATGGGAACTGCAGATTCTTTGCGCTACATATATCCAAAACTTAAGGCTGGAGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497010.1
CDS GCA 90 bp CAGCACATCTGTCTTAAGTTTTGGATATATGTAGCGCAAAGAATCTaGAGTTCCCATGTCAGCGTCATCAGGAATACACACAATATCTGG +
Preference number: 5 (lower is better)
Translates to: QHICLKFWIYVAQRI*SSHVSVIRNTHNIW
Trigger: CCAGATATTGTGTGTATTCCTGATGACGCTGACATGGGAACTGCAGATTCTTTGCGCTACATATATCCAAAACTTAAGACAGATGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360403.7
ENST00000372182.6
ENST00000372183.7
ENST00000620860.4
CDS-3UTR CAA 90 bp TTCACTGCAGCACTATTCACAATAGCCAAGAGGTGGCAGCAACTCAAATGTTTCAGGTTCTATGCTATCTaGGCCTTTTCTCATCAACAT +
Preference number: 5 (lower is better)
Translates to: FTAALFTIAKRWQQLKCFRFYAI*AFSHQH
Trigger: ATGTTGATGAGAAAAGGCCAAGATAGCATAGAACCT...GAAACATTTGAGTTGCTGCCACCTCTTGGCTATTGTGAATAGTGCTGCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480675.5
CDS-3UTR CAA 90 bp TTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGGCCGGTACCAAATTAAAGGTTaGTTCCCAACTGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: FGSPSLLGNKYRVKQVGRYQIKG*FPTGSR
Trigger: TCTGCTTCCAGTTGGGAACAAACCTTTAATTTGGTA...CCGGCCCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CAA 90 bp CACACACTTGCTCCAGATGATCTTTACCACATGACACATGAACATACACTGTGTTACCAAATTAAAGGTTaGTTCCCAACTGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: HTLAPDDLYHMTHEHTLCYQIKG*FPTGSR
Trigger: TCTGCTTCCAGTTGGGAACAAACCTTTAATTTGGTA...ACACAGTGTATGTTCATGTGTCATGTGGTAAAGATCATCTGGAGCAAGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS-3UTR CAA 90 bp ATGCCTTTGGAAGCCCTTCTTTATTGGGAAATAAATACAGAGTTAAACAGGTGGAGGTTCTATGCTATCTaGGCCTTTTCTCATCAACAT +
Preference number: 5 (lower is better)
Translates to: MPLEALLYWEINTELNRWRFYAI*AFSHQH
Trigger: ATGTTGATGAGAAAAGGCCAAGATAGCATAGAACCT...CCACCTGTTTAACTCTGTATTTATTTCCCAATAAAGAAGGGCTTCCAAAGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360403.7
ENST00000620860.4
CDS TCA 90 bp ATATCTGGCTTCATTTTCATCTTGAATTCTGCACATAGAGCCTTTTaGACATCCCTGGTTGTAACCACAATGACTTCTTCAAATCCAACA +
Preference number: 5 (lower is better)
Translates to: ISGFIFILNSAHRAF*TSLVVTTMTSSNPT
Trigger: TGTTGGATTTGAAGAAGTCATTGTGGTTACAACCAGGGATGTTCAAAAGGCTCTATGTGCAGAATTCAAGATGAAAATGAAGCCAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360403.7
ENST00000372182.6
ENST00000372183.7
ENST00000477953.5
ENST00000480675.5
ENST00000487532.5
ENST00000497010.1
ENST00000620860.4
CDS TCA 72 bp CGCCGCAACCGCTCCCAGCGATCTCCACGCCGCCTCTaGCTGACAGCCCAATGGCGCAGGCGCGCGATGGCC +
Preference number: 6 (lower is better)
Translates to: RRNRSQRSPRRL*LTAQWRRRAMA
Trigger: GGCCATCGCGCGCCTGCGCCATTGGGCTGTCAGTCAGAGGCGGCGTGGAGATCGCTGGGAGCGGTTGCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS TCA 72 bp GCAACCGCTCCCAGCGATCTCCACGCCGCCTCTGACTaGCAGCCCAATGGCGCAGGCGCGCGATGGCCGAGA +
Preference number: 6 (lower is better)
Translates to: ATAPSDLHAASD*QPNGAGARWPR
Trigger: TCTCGGCCATCGCGCGCCTGCGCCATTGGGCTGTCAGTCAGAGGCGGCGTGGAGATCGCTGGGAGCGGTTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS CCA 72 bp CCAATGGCGCAGGCGCGCGATGGCCGAGAAACTCGATaGAACGCGCAGAGCAGACCCATGGAGAAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: PMAQARDGRETR*NAQSRPMEKRR
Trigger: TCTTCTCTTCTCCATGGGTCTGCTCTGCGCGTTCCATCGAGTTTCTCGGCCATCGCGCGCCTGCGCCATTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620860.4
CDS CAA 72 bp TCCCAGCTACTCGGGAGGCTGAGGCAGGTGAAGTGCTaGAACCCGGGAGGTGGAGATTGGAGTGAACCGAGA +
Preference number: 6 (lower is better)
Translates to: SQLLGRLRQVKC*NPGGGDWSEPR
Trigger: TCTCGGTTCACTCCAATCTCCACCTCCCGGGTTCAAGCACTTCACCTGCCTCAGCCTCCCGAGTAGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372182.6
CDS CCA 72 bp TTTTTACAAACCGGGTCAGCCAGCTTGTGTGCGGCCTaGCAGGGCAGAAGTCACAGCTATAACTCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: FLQTGSASLCAA*QGRSHSYNSAP
Trigger: GGGAGCTGAGTTATAGCTGTGACTTCTGCCCTGCCAGGCCGCACACAAGCTGGCTGACCCGGTTTGTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360403.7
ENST00000372182.6
ENST00000372183.7
ENST00000477953.5
ENST00000480675.5
ENST00000487532.5
ENST00000497010.1
ENST00000620860.4
CDS CCA 72 bp CCAACCAGGTGTTTGCTGACAATCTGGGCTGACGAATaGACTGGTGGTTCTTCTGGACAGAGAGCAGACAGC +
Preference number: 6 (lower is better)
Translates to: PTRCLLTIWADE*TGGSSGQRADS
Trigger: GCTGTCTGCTCTCTGTCCAGAAGAACCACCAGTCCATTCGTCAGCCCAGATTGTCAGCAAACACCTGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360403.7
ENST00000372183.7
ENST00000439363.5
ENST00000620860.4
CDS TCA 72 bp GTCAACTCCAACCAGGTGTTTGCTGACAATCTGGGCTaGCGAATGGACTGGTGGTTCTTCTGGACAGAGAGC +
Preference number: 6 (lower is better)
Translates to: VNSNQVFADNLG*RMDWWFFWTES
Trigger: GCTCTCTGTCCAGAAGAACCACCAGTCCATTCGTCAGCCCAGATTGTCAGCAAACACCTGGTTGGAGTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360403.7
ENST00000372183.7
ENST00000439363.5
ENST00000620860.4
CDS CCA 72 bp AGGCTGTCAACTCCAACCAGGTGTTTGCTGACAATCTaGGCTGACGAATGGACTGGTGGTTCTTCTGGACAG +
Preference number: 6 (lower is better)
Translates to: RLSTPTRCLLTI*ADEWTGGSSGQ
Trigger: CTGTCCAGAAGAACCACCAGTCCATTCGTCAGCCCAGATTGTCAGCAAACACCTGGTTGGAGTTGACAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360403.7
ENST00000372183.7
ENST00000439363.5
ENST00000620860.4
CDS GCA 72 bp CCTCTGGCCACTTCCAATCAAGCAGTCCTTGATGTCTaGACCCTTCTCGATCACAGCATTGTTGCAGATGAC +
Preference number: 6 (lower is better)
Translates to: PLATSNQAVLDV*TLLDHSIVADD
Trigger: GTCATCTGCAACAATGCTGTGATCGAGAAGGGTGCAGACATCAAGGACTGCTTGATTGGAAGTGGCCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS TCA 72 bp TGTCTGCACCCTTCTCGATCACAGCATTGTTGCAGATaGCACTGCCTTGGATATTGCTTCCTTCCTCCACAG +
Preference number: 6 (lower is better)
Translates to: CLHPSRSQHCCR*HCLGYCFLPPQ
Trigger: CTGTGGAGGAAGGAAGCAATATCCAAGGCAGTGTCATCTGCAACAATGCTGTGATCGAGAAGGGTGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS TCA 72 bp CTTCAATCCTCTGGCCACTTCCAATCAAGCAGTCCTTaGTGTCTGCACCCTTCTCGATCACAGCATTGTTGC +
Preference number: 6 (lower is better)
Translates to: LQSSGHFQSSSP*CLHPSRSQHCC
Trigger: GCAACAATGCTGTGATCGAGAAGGGTGCAGACATCAAGGACTGCTTGATTGGAAGTGGCCAGAGGATTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS CAA 72 bp GCTTCAATCCTCTGGCCACTTCCAATCAAGCAGTCCTaGATGTCTGCACCCTTCTCGATCACAGCATTGTTG +
Preference number: 6 (lower is better)
Translates to: ASILWPLPIKQS*MSAPFSITALL
Trigger: CAACAATGCTGTGATCGAGAAGGGTGCAGACATCAAGGACTGCTTGATTGGAAGTGGCCAGAGGATTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS CAA 90 bp ATCAAGCAGTCCTTGATGTCTGCACCCTTCTCGATCACAGCATTGTaGCAGATGACACTGCCTTGGATATTGCTTCCTTCCTCCACAGTG +
Preference number: 6 (lower is better)
Translates to: IKQSLMSAPFSITAL*QMTLPWILLPSSTV
Trigger: CACTGTGGAGGAAGGAAGCAATATCCAAGGCAGTGTCATCTGCAACAATGCTGTGATCGAGAAGGGTGCAGACATCAAGGACTGCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS CAA 90 bp CCAATCAAGCAGTCCTTGATGTCTGCACCCTTCTCGATCACAGCATaGTTGCAGATGACACTGCCTTGGATATTGCTTCCTTCCTCCACA +
Preference number: 6 (lower is better)
Translates to: PIKQSLMSAPFSITA*LQMTLPWILLPSST
Trigger: TGTGGAGGAAGGAAGCAATATCCAAGGCAGTGTCATCTGCAACAATGCTGTGATCGAGAAGGGTGCAGACATCAAGGACTGCTTGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS CAA 72 bp CAGTCCTTGATGTCTGCACCCTTCTCGATCACAGCATaGTTGCAGATGACACTGCCTTGGATATTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: QSLMSAPFSITA*LQMTLPWILLP
Trigger: AGGAAGCAATATCCAAGGCAGTGTCATCTGCAACAATGCTGTGATCGAGAAGGGTGCAGACATCAAGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS CAA 90 bp TTAGCTTTGGCTTCAATCCTCTGGCCACTTCCAATCAAGCAGTCCTaGATGTCTGCACCCTTCTCGATCACAGCATTGTTGCAGATGACA +
Preference number: 6 (lower is better)
Translates to: LALASILWPLPIKQS*MSAPFSITALLQMT
Trigger: TGTCATCTGCAACAATGCTGTGATCGAGAAGGGTGCAGACATCAAGGACTGCTTGATTGGAAGTGGCCAGAGGATTGAAGCCAAAGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS TCA 72 bp GGTACAGGGGGAAACATACCCTTCCTCCACAGTGACTaGGTTCATGAGAAGGCAATTGGTAATAGTCACTCT +
Preference number: 6 (lower is better)
Translates to: GTGGNIPFLHSD*VHEKAIGNSHS
Trigger: AGAGTGACTATTACCAATTGCCTTCTCATGAACTCAGTCACTGTGGAGGAAGGGTATGTTTCCCCCTGTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372183.7
CDS CCA 72 bp ACCTCATTCACTCGTTTAGCTTTGGCTTCAATCCTCTaGCCACTTCCAATCAAGCAGTCCTTGATGTCTGCA +
Preference number: 6 (lower is better)
Translates to: TSFTRLALASIL*PLPIKQSLMSA
Trigger: TGCAGACATCAAGGACTGCTTGATTGGAAGTGGCCAGAGGATTGAAGCCAAAGCTAAACGAGTGAATGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS CAA 90 bp CTCATGACCCCTTCCTCCACAGTGACTGAGTTCATGAGAAGGCAATaGGTAATAGTCACTCTATCTTTTATGAGACAGGATGAGCCAATG +
Preference number: 6 (lower is better)
Translates to: LMTPSSTVTEFMRRQ*VIVTLSFMRQDEPM
Trigger: CATTGGCTCATCCTGTCTCATAAAAGATAGAGTGACTATTACCAATTGCCTTCTCATGAACTCAGTCACTGTGGAGGAAGGGGTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486491.1
CDS TCA 72 bp ACCTCATTCACTCGTTTAGCCTTCCTCCACAGTGACTaGGTTCATGAGAAGGCAATTGGTAATAGTCACTCT +
Preference number: 6 (lower is better)
Translates to: TSFTRLAFLHSD*VHEKAIGNSHS
Trigger: AGAGTGACTATTACCAATTGCCTTCTCATGAACTCAGTCACTGTGGAGGAAGGCTAAACGAGTGAATGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439363.5
ENST00000620860.4
CDS GCA 72 bp AGCCTTAAGTTTTGGATATATGTAGCGCAAAGAATCTaGAGTTCCCATGTCAGCGTCATCAGGAATACACAC +
Preference number: 6 (lower is better)
Translates to: SLKFWIYVAQRI*SSHVSVIRNTH
Trigger: GTGTGTATTCCTGATGACGCTGACATGGGAACTGCAGATTCTTTGCGCTACATATATCCAAAACTTAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497010.1
CDS CAA 90 bp GAAACATACCCTTCCTCCACAGTGACTGAGTTCATGAGAAGGCAATaGGTAATAGTCACTCTATCTTTTATGAGACAGGATGAGCCAATG +
Preference number: 6 (lower is better)
Translates to: ETYPSSTVTEFMRRQ*VIVTLSFMRQDEPM
Trigger: CATTGGCTCATCCTGTCTCATAAAAGATAGAGTGACTATTACCAATTGCCTTCTCATGAACTCAGTCACTGTGGAGGAAGGGTATGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372183.7
CDS GCA 72 bp TGTCTTAAGTTTTGGATATATGTAGCGCAAAGAATCTaGAGTTCCCATGTCAGCGTCATCAGGAATACACAC +
Preference number: 6 (lower is better)
Translates to: CLKFWIYVAQRI*SSHVSVIRNTH
Trigger: GTGTGTATTCCTGATGACGCTGACATGGGAACTGCAGATTCTTTGCGCTACATATATCCAAAACTTAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360403.7
ENST00000372182.6
ENST00000372183.7
ENST00000620860.4
CDS GCA 72 bp CATCTTAAGTTTTGGATATATGTAGCGCAAAGAATCTaGAGTTCCCATGTCAGCGTCATCAGGAATACACAC +
Preference number: 6 (lower is better)
Translates to: HLKFWIYVAQRI*SSHVSVIRNTH
Trigger: GTGTGTATTCCTGATGACGCTGACATGGGAACTGCAGATTCTTTGCGCTACATATATCCAAAACTTAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487532.5
CDS CAA 90 bp ATATTGCTTCCTTCCTCCACAGTGACTGAGTTCATGAGAAGGCAATaGGTAATAGTCACTCTATCTTTTATGAGACAGGATGAGCCAATG +
Preference number: 6 (lower is better)
Translates to: ILLPSSTVTEFMRRQ*VIVTLSFMRQDEPM
Trigger: CATTGGCTCATCCTGTCTCATAAAAGATAGAGTGACTATTACCAATTGCCTTCTCATGAACTCAGTCACTGTGGAGGAAGGAAGCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360403.7
CDS TCA 72 bp CAGGAATACACACAATATCTGGCTTCATTTTCATCTTaGATTCTGCACATAGAGCCTTTTGAACATCCCTGG +
Preference number: 6 (lower is better)
Translates to: QEYTQYLASFSS*ILHIEPFEHPW
Trigger: CCAGGGATGTTCAAAAGGCTCTATGTGCAGAATTCAAGATGAAAATGAAGCCAGATATTGTGTGTATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360403.7
ENST00000372182.6
ENST00000372183.7
ENST00000477953.5
ENST00000480675.5
ENST00000487532.5
ENST00000497010.1
ENST00000620860.4
CDS TCA 72 bp TTCATTTTCATCTTGAATTCTGCACATAGAGCCTTTTaGACATCCCTGGTTGTAACCACAATGACTTCTTCA +
Preference number: 6 (lower is better)
Translates to: FIFILNSAHRAF*TSLVVTTMTSS
Trigger: TGAAGAAGTCATTGTGGTTACAACCAGGGATGTTCAAAAGGCTCTATGTGCAGAATTCAAGATGAAAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360403.7
ENST00000372182.6
ENST00000372183.7
ENST00000477953.5
ENST00000480675.5
ENST00000487532.5
ENST00000497010.1
ENST00000620860.4