RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF2B2 (Homo sapiens)

Ensembl gene IDs: ENSG00000119718

Ensembl transcript IDs: ENST00000266126.10, ENST00000553401.5, ENST00000553539.1, ENST00000554748.2, ENST00000555522.1, ENST00000556028.5, ENST00000556668.1

Found 341 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTaGCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCC +
Preference number: 1 (lower is better)
Translates to: EHRCTDDEWGGMVFC*QCQSVSSCHSSQGP
Trigger: GGGGCCCTGAGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
3UTR GCA 90 bp TTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTaGTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGC +
Preference number: 1 (lower is better)
Translates to: FEHRCTDDEWGGMVF*CQCQSVSSCHSSQG
Trigger: GCCCTGAGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
3UTR CCA 90 bp GGGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTaGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCC +
Preference number: 1 (lower is better)
Translates to: GELWRKFEHRCTDDE*GGMVFCCQCQSVSS
Trigger: GGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
3UTR CCA 90 bp AGGTGGGCACCCCTGATACCAAGGCTGACAGGTAGTGAGTTGATGTaGAACTTCTGTTTCCTCCTGTTCAGTTCAGGTTCTCTCTTTCTG +
Preference number: 1 (lower is better)
Translates to: RWAPLIPRLTGSELM*NFCFLLFSSGSLFL
Trigger: CAGAAAGAGAGAACCTGAACTGAACAGGAGGAAACAGAAGTTCCACATCAACTCACTACCTGTCAGCCTTGGTATCAGGGGTGCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR TCA 90 bp AGGCTCCAAAATCAACAAGTTAAGCCCTGCTGCTCTGTTAAGATCTaGAAGGCAAGACACAGTCCTGGATGTGTGCCCTTGTTACGGGGT +
Preference number: 1 (lower is better)
Translates to: RLQNQQVKPCCSVKI*KARHSPGCVPLLRG
Trigger: ACCCCGTAACAAGGGCACACATCCAGGACTGTGTCTTGCCTTTCAGATCTTAACAGAGCAGCAGGGCTTAACTTGTTGATTTTGGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR GCA 90 bp GCTGCTCTGTTAAGATCTGAAAGGCAAGACACAGTCCTGGATGTGTaGCCTTGTTACGGGGTGACTAAAAAGGCAGGCAACAGTATCAAG +
Preference number: 1 (lower is better)
Translates to: AALLRSERQDTVLDV*PCYGVTKKAGNSIK
Trigger: CTTGATACTGTTGCCTGCCTTTTTAGTCACCCCGTAACAAGGGCACACATCCAGGACTGTGTCTTGCCTTTCAGATCTTAACAGAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR TCA 90 bp CCTGAGATCAGATGCAGTAGGACTGAGATGAAACCCAAGACTGTGTaGGTGAGTGATCGGAATCACTCTCAGGTGATTCTGATGATCAGC +
Preference number: 1 (lower is better)
Translates to: PEIRCSRTEMKPKTV*VSDRNHSQVILMIS
Trigger: GCTGATCATCAGAATCACCTGAGAGTGATTCCGATCACTCACTCACACAGTCTTGGGTTTCATCTCAGTCCTACTGCATCTGATCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR TCA 90 bp TGCCTCACTGCTGCTCTTACTCCAAACCACACAATTGTACCCAAGTaGATTGCTGTTAGAATTGGTGCCTTTGGAGGAGACAATTGCTCG +
Preference number: 1 (lower is better)
Translates to: CLTAALTPNHTIVPK*IAVRIGAFGGDNCS
Trigger: CGAGCAATTGTCTCCTCCAAAGGCACCAATTCTAACAGCAATTCACTTGGGTACAATTGTGTGGTTTGGAGTAAGAGCAGCAGTGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR CCA 90 bp GACCTTTCCCTCAGAACCTACCTCTGCCCAGTGTTAACCAAAATGTaGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTTGTTAAAC +
Preference number: 1 (lower is better)
Translates to: DLSLRTYLCPVLTKM*FQITCSKPTGYLLN
Trigger: GTTTAACAAATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTGGTTAACACTGGGCAGAGGTAGGTTCTGAGGGAAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR GCA 90 bp ACATTAAATGCAGTGAACCAGCCCAAATGCCTTCAATCCAGACACTaGCCCTCCAGCCATCCTTTTGAAACTTCTATTGCCATGTATAAT +
Preference number: 1 (lower is better)
Translates to: TLNAVNQPKCLQSRH*PSSHPFETSIAMYN
Trigger: ATTATACATGGCAATAGAAGTTTCAAAAGGATGGCTGGAGGGGCAGTGTCTGGATTGAAGGCATTTGGGCTGGTTCACTGCATTTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR TCA 90 bp TTCTGTGAATGGCAGGACTTCTTCAGGAGCCACAAACTTATGAAATaGGTCTTCTTCATTGGGGAACTGTGGAGAAAGTTTGAACATAGG +
Preference number: 1 (lower is better)
Translates to: FCEWQDFFRSHKLMK*VFFIGELWRKFEHR
Trigger: CCTATGTTCAAACTTTCTCCACAGTTCCCCAATGAAGAAGACTCATTTCATAAGTTTGTGGCTCCTGAAGAAGTCCTGCCATTCACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553401.5
3UTR GCA 90 bp AATATTGGTAACAAATTCACATTAAATGCAGTGAACCAGCCCAAATaGCTTCAATCCAGACACTGCCCCTCCAGCCATCCTTTTGAAACT +
Preference number: 1 (lower is better)
Translates to: NIGNKFTLNAVNQPK*LQSRHCPSSHPFET
Trigger: AGTTTCAAAAGGATGGCTGGAGGGGCAGTGTCTGGATTGAAGGCATTTGGGCTGGTTCACTGCATTTAATGTGAATTTGTTACCAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR GCA 90 bp AAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACCTCTaGCCAGTGTTAACCAAAATGTGGTTTCAAATCACCTGTTCAAAG +
Preference number: 1 (lower is better)
Translates to: KEISKNRDLSLRTYL*PVLTKMWFQITCSK
Trigger: CTTTGAACAGGTGATTTGAAACCACATTTTGGTTAACACTGGGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR GCA 90 bp TGTAAGCATAAACATGTCAACAAAATTAGAGGATGTCCCTCTGCTTaGTGTGCTTGGTATTATACTTCTATACTGTTTCCCTATGCGTGT +
Preference number: 1 (lower is better)
Translates to: CKHKHVNKIRGCPSA*CAWYYTSILFPYAC
Trigger: ACACGCATAGGGAAACAGTATAGAAGTATAATACCAAGCACAGCAAGCAGAGGGACATCCTCTAATTTTGTTGACATGTTTATGCTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR CCA 90 bp AAACATGTCAACAAAATTAGAGGATGTCCCTCTGCTTGCTGTGCTTaGTATTATACTTCTATACTGTTTCCCTATGCGTGTACATATAAT +
Preference number: 1 (lower is better)
Translates to: KHVNKIRGCPSACCA*YYTSILFPYACTYN
Trigger: ATTATATGTACACGCATAGGGAAACAGTATAGAAGTATAATACCAAGCACAGCAAGCAGAGGGACATCCTCTAATTTTGTTGACATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGGAGGCCACAGGCATGTaGCACCATGTCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLEATGM*HHVWLI
Trigger: AATTAGCCAGACATGGTGGCACATGCCTGTGGCCTC...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR CCA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTAGTGCAGTGGCCCAATaGCACTGCTCACTGCAACCT +
Preference number: 2 (lower is better)
Translates to: VLGTVRADQKESFYPYNLSAVAQ*HCSLQP
Trigger: AGGTTGCAGTGAGCAGTGCCATTGGGCCACTGCACT...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR TCA 90 bp CTTTTCTGGGAAGCTTTAAACAGATTCCCAGGTAGTAACCCTGAGATCAGATGCGCCCTTGTTACGGGGTaGCTAAAAAGGCAGGCAACA +
Preference number: 2 (lower is better)
Translates to: LFWEALNRFPGSNPEIRCALVTG*LKRQAT
Trigger: TGTTGCCTGCCTTTTTAGTCACCCCGTAACAAGGGC...GCATCTGATCTCAGGGTTACTACCTGGGAATCTGTTTAAAGCTTCCCAGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR TCA 90 bp ATTGGGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTTGGCAGCATCAGTCATaGCAGTTGTCTCAATACCTG +
Preference number: 2 (lower is better)
Translates to: IGELWRKFEHRCTDDEWGWQHQS*QLSQYL
Trigger: CAGGTATTGAGACAACTGTCATGACTGATGCTGCCA...ACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553401.5
3UTR-3UTR TCA 90 bp TTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGCACCTTGTTGACTCTTaGCATAACGGCAAAAATGGC +
Preference number: 2 (lower is better)
Translates to: FEHRCTDDEWGGMVFCCQHLVDS*HNGKNG
Trigger: GCCATTTTTGCCGTTATGTCAAGAGTCAACAAGGTG...CTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
3UTR-3UTR GCA 90 bp CAGGTCACTAAGAGGCTCCAAAATCAACAAGTTAAGCCCTGCTGCTCTGTTAAGTTAGGTGGACTCCTGTaGACTCCCACATTGCAAGGA +
Preference number: 2 (lower is better)
Translates to: QVTKRLQNQQVKPCCSVKLGGLL*TPTLQG
Trigger: TCCTTGCAATGTGGGAGTGCACAGGAGTCCACCTAA...CTTAACAGAGCAGCAGGGCTTAACTTGTTGATTTTGGAGCCTCTTAGTGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp TTAAATGGATCCAGTAGGAACTGCAGAAAACTGGAGATGTTCCATCCAATGGCAACAAGTGGGAGCCACTaGATCTGGCCAGTACTACCA +
Preference number: 2 (lower is better)
Translates to: LNGSSRNCRKLEMFHPMATSGSH*IWPVLP
Trigger: TGGTAGTACTGGCCAGATGCAGTGGCTCCCACTTGT...TGCCATTGGATGGAACATCTCCAGTTTTCTGCAGTTCCTACTGGATCCATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTCTTCAATCCAGACACTaGCCCTCCAGCCATCCTTTT +
Preference number: 2 (lower is better)
Translates to: VLGTVRADQKESFYPYNLLQSRH*PSSHPF
Trigger: AAAAGGATGGCTGGAGGGGCAGTGTCTGGATTGAAG...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp TTCAGGTTCTCTCTTTCTGATACTTACCCCTCCTCAAATAGGGAAACGGAGAGACATCCAACTCAGTCATaGCTGGGAAGGATGTTGGTG +
Preference number: 2 (lower is better)
Translates to: FRFSLSDTYPSSNRETERHPTQS*LGRMLV
Trigger: CACCAACATCCTTCCCAGGCATGACTGAGTTGGATG...TCTCTCCGTTTCCCTATTTGAGGAGGGGTAAGTATCAGAAAGAGAGAACCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR CCA 90 bp AAATGCAGTGAACCAGCCCAAATGCCTTCAATCCAGACACTGCCCCTCCAGCCAGAGACTATCCTTTTCTaGGAAGCTTTAAACAGATTC +
Preference number: 2 (lower is better)
Translates to: KCSEPAQMPSIQTLPLQPETILF*EALNRF
Trigger: GAATCTGTTTAAAGCTTCCCAGAAAAGGATAGTCTC...TGGCTGGAGGGGCAGTGTCTGGATTGAAGGCATTTGGGCTGGTTCACTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp TTCAGGTTCTCTCTTTCTGATACTTACCCCTCCTCAAATAGGGAAACGGAGAGATCATCCAGGCAGGAGTaGAGTGGTACAATGATAGCT +
Preference number: 2 (lower is better)
Translates to: FRFSLSDTYPSSNRETERSSRQE*SGTMIA
Trigger: AGCTATCATTGTACCACTGCACTCCTGCCTGGATGA...TCTCTCCGTTTCCCTATTTGAGGAGGGGTAAGTATCAGAAAGAGAGAACCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGGGATCCAGTAGGAACTaGAGAAAACTGGAGATGTTC +
Preference number: 2 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLGSSRN*RKLEMF
Trigger: GAACATCTCCAGTTTTCTGCAGTTCCTACTGGATCC...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR CAA 90 bp TTTAAGTTCCTTGCCTCACTGCTGCTCTTACTCCAAACCACACAATaGTACCCAAGTGAATTGCTGTTAGAATTGGTGCCTTTGGAGGAG +
Preference number: 2 (lower is better)
Translates to: FKFLASLLLLLQTTQ*YPSELLLELVPLEE
Trigger: CTCCTCCAAAGGCACCAATTCTAACAGCAATTCACTTGGGTACAATTGTGTGGTTTGGAGTAAGAGCAGCAGTGAGGCAAGGAACTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR TCA 90 bp TTCAGGTTCTCTCTTTCTGATACTTACCCCTCCTCAAATAGGGAAACGGAGAGATGGGGCCAGGAGCAGTaGATTGTAAAGGAAACTATA +
Preference number: 2 (lower is better)
Translates to: FRFSLSDTYPSSNRETERWGQEQ*IVKETI
Trigger: TATAGTTTCCTTTACAATTCACTGCTCCTGGCCCCA...TCTCTCCGTTTCCCTATTTGAGGAGGGGTAAGTATCAGAAAGAGAGAACCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp AAGATCGCTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACGTGAACCAGCCCAAATaGCTTCAATCCAGACACTGC +
Preference number: 2 (lower is better)
Translates to: KIALKEISKNRDLSLRTYVNQPK*LQSRHC
Trigger: GCAGTGTCTGGATTGAAGGCATTTGGGCTGGTTCAC...GTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAGCGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR CCA 90 bp CAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTTGTTAAACATCAGGCTAAAGTGCAGTaGCCCAATGGCACTGCTCAC +
Preference number: 2 (lower is better)
Translates to: QNVVSNHLFKAHRLFVKHQAKVQ*PNGTAH
Trigger: GTGAGCAGTGCCATTGGGCCACTGCACTTTAGCCTG...ATGTTTAACAAATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR TCA 90 bp TTAAATGGATCCAGTAGGAACTGCAGAAAACTGGAGATGTTCCATCCAATGGCATGCTCTGTTAAGATCTaGAAGGCAAGACACAGTCCT +
Preference number: 2 (lower is better)
Translates to: LNGSSRNCRKLEMFHPMACSVKI*KARHSP
Trigger: AGGACTGTGTCTTGCCTTTCAGATCTTAACAGAGCA...TGCCATTGGATGGAACATCTCCAGTTTTCTGCAGTTCCTACTGGATCCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR TCA 90 bp AAGATCGCTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACGAAAGTTTAAGTTCCTaGCACAGACGCAACCAGGTC +
Preference number: 2 (lower is better)
Translates to: KIALKEISKNRDLSLRTYESLSS*HRRNQV
Trigger: GACCTGGTTGCGTCTGTGTCAGGAACTTAAACTTTC...GTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAGCGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTCCACAAACTAACTACTaGCATTTGGAAATGTTGGCC +
Preference number: 2 (lower is better)
Translates to: VLGTVRADQKESFYPYNLPQTNY*HLEMLA
Trigger: GGCCAACATTTCCAAATGGCAGTAGTTAGTTTGTGG...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp TGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTAGTTGTCTCAATACCTaGTTTGGACAAATTCACAGC +
Preference number: 2 (lower is better)
Translates to: WRKFEHRCTDDEWGGMVFSCLNT*FGQIHS
Trigger: GCTGTGAATTTGTCCAAAGCAGGTATTGAGACAACT...AAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553401.5
3UTR-3UTR CCA 90 bp TTCAGGTTCTCTCTTTCTGATACTTACCCCTCCTCAAATAGGGAAACGGAGAGAGCCATTTGGAAATGTTaGCCCAGAGTTGCCAAATTT +
Preference number: 2 (lower is better)
Translates to: FRFSLSDTYPSSNRETERAIWKC*PRVAKF
Trigger: AAATTTGGCAACTCTGGGCCAACATTTCCAAATGGC...TCTCTCCGTTTCCCTATTTGAGGAGGGGTAAGTATCAGAAAGAGAGAACCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR TCA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTCCTATAAACACTACATaGGACTATCCTTTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: VLGTVRADQKESFYPYNLPINTT*DYPFLG
Trigger: TCCCAGAAAAGGATAGTCTCATGTAGTGTTTATAGG...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGCAAATTCACATTAAATaGAGTGAACCAGCCCAAATG +
Preference number: 2 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLQIHIK*SEPAQM
Trigger: CATTTGGGCTGGTTCACTGCATTTAATGTGAATTTG...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp TTCAGGTTCTCTCTTTCTGATACTTACCCCTCCTCAAATAGGGAAACGGAGAGAAATGAGTCCGTATTATaGATATTGCTCTGCAGCTTG +
Preference number: 2 (lower is better)
Translates to: FRFSLSDTYPSSNRETERNESVL*ILLCSL
Trigger: CAAGCTGCAGAGCAATATGCATAATACGGACTCATT...TCTCTCCGTTTCCCTATTTGAGGAGGGGTAAGTATCAGAAAGAGAGAACCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR CCA 90 bp ACAAATAATTCTAGAAATACAGCTTCCAAATTGCCCTCTAAAAGGCTGTACCAAGGCAAGACACAGTCCTaGATGTGTGCCCTTGTTACG +
Preference number: 2 (lower is better)
Translates to: TNNSRNTASKLPSKRLYQGKTQS*MCALVT
Trigger: CGTAACAAGGGCACACATCCAGGACTGTGTCTTGCC...TTGGTACAGCCTTTTAGAGGGCAATTTGGAAGCTGTATTTCTAGAATTATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR CAA 90 bp AAGTATCATAAAGCATTTTTGGAGCCAGGAACAGATTTAAGTTCCTaGCCTCACTGCTGCTCTTACTCCAAACCACACAATTGTACCCAA +
Preference number: 2 (lower is better)
Translates to: KYHKAFLEPGTDLSS*PHCCSYSKPHNCTQ
Trigger: TTGGGTACAATTGTGTGGTTTGGAGTAAGAGCAGCAGTGAGGCAAGGAACTTAAATCTGTTCCTGGCTCCAAAAATGCTTTATGATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR CCA 90 bp CCAGTGTTAACCAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTATGGAACCTTCAAGTaGCTTTTATTGGTAGAGCCT +
Preference number: 2 (lower is better)
Translates to: PVLTKMWFQITCSKPTGYYGTFK*LLLVEP
Trigger: AGGCTCTACCAATAAAAGCCACTTGAAGGTTCCATA...ATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTGGTTAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR CCA 90 bp TTCAGGTTCTCTCTTTCTGATACTTACCCCTCCTCAAATAGGGAAACGGAGAGAACACAGAGACTAAGATaGACAAAGGACAAGTATCAT +
Preference number: 2 (lower is better)
Translates to: FRFSLSDTYPSSNRETERTQRLR*TKDKYH
Trigger: ATGATACTTGTCCTTTGTCCATCTTAGTCTCTGTGT...TCTCTCCGTTTCCCTATTTGAGGAGGGGTAAGTATCAGAAAGAGAGAACCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp CAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTTGTTAAACATAAAAGGCTCTGCTGCTaGTGTTTCAAGCAGTTCTGT +
Preference number: 2 (lower is better)
Translates to: QNVVSNHLFKAHRLFVKHKRLCC*CFKQFC
Trigger: ACAGAACTGCTTGAAACAGCAGCAGCAGAGCCTTTT...ATGTTTAACAAATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp TTATTGGTAGAGCCTAGAAAAAGTGTCATAGCCATTTCTGAGCAAAAATCTGTACACATTGCAAGGATGTaGTTCAGCAGCAACACTCAA +
Preference number: 2 (lower is better)
Translates to: LLVEPRKSVIAISEQKSVHIARM*FSSNTQ
Trigger: TTGAGTGTTGCTGCTGAAGCACATCCTTGCAATGTG...TACAGATTTTTGCTCAGAAATGGCTATGACACTTTTTCTAGGCTCTACCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp ATTTGGAAATGTTGGCCCAGAGTTGCCAAATTTGAGTTTTCAAGAAAAGCAAGAAACCCTGAGATCAGATaGAGTAGGACTGAGATGAAA +
Preference number: 2 (lower is better)
Translates to: IWKCWPRVAKFEFSRKARNPEIR*SRTEMK
Trigger: TTTCATCTCAGTCCTACTGCATCTGATCTCAGGGTT...TCTTGCTTTTCTTGAAAACTCAAATTTGGCAACTCTGGGCCAACATTTCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp CATAAACATGTCAACAAAATTAGAGGATGTCCCTCTGCTTGCTGTGCTTGGTATTCAAATGGACTTCCTTaGAAATCTGTCCCATTCTTT +
Preference number: 2 (lower is better)
Translates to: HKHVNKIRGCPSACCAWYSNGLP*KSVPFF
Trigger: AAAGAATGGGACAGATTTGCAAGGAAGTCCATTTGA...ATACCAAGCACAGCAAGCAGAGGGACATCCTCTAATTTTGTTGACATGTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR GCA 90 bp GGAGAAGGACAAATAGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTACAGTGGTGGTTGTACAATaGTGTGAATGTACTAGATAT +
Preference number: 2 (lower is better)
Translates to: GEGQIGRDYLMGTGCFSTVVVVQ*CECTRY
Trigger: ATATCTAGTACATTCACAGCATTGTACAACCACCAC...TGTAGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCTATTTGTCCTTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554748.2
3UTR-3UTR CCA 90 bp AGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTACAGTGGAGAAAAAGTTGAAACTAGAGAGTGGTaGTTGTACAATGCTGTGAAT +
Preference number: 2 (lower is better)
Translates to: RERLLNGYRVFFYSGEKVETREW*LYNAVN
Trigger: ATTCACAGCATTGTACAACCACCACTCTCTAGTTTC...AACTTTTTCTCCACTGTAGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554748.2
3UTR CCA 72 bp TTTCCGAGTTTCTCGGTTCCGCCAGCAAGGCAGGGGTaGGAGGTGGGCACCCCTGATACCAAGGCTGACAGG +
Preference number: 3 (lower is better)
Translates to: FPSFSVPPARQG*EVGTPDTKADR
Trigger: CCTGTCAGCCTTGGTATCAGGGGTGCCCACCTCCCACCCCTGCCTTGCTGGCGGAACCGAGAAACTCGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR GCA 72 bp GACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTaGCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: DDEWGGMVFCCQ*QSVSSCHSSQG
Trigger: GCCCTGAGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
3UTR GCA 72 bp CAGGCTAAAGTGCAGTGGCCCAATGGCACTGCTCACTaGAACCTCTACTTCCCAAGTTCAGCCTCCCGAGTA +
Preference number: 3 (lower is better)
Translates to: QAKVQWPNGTAH*NLYFPSSASRV
Trigger: TACTCGGGAGGCTGAACTTGGGAAGTAGAGGTTGCAGTGAGCAGTGCCATTGGGCCACTGCACTTTAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR GCA 72 bp AGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTaGTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGC +
Preference number: 3 (lower is better)
Translates to: RCTDDEWGGMVF*CQCQSVSSCHS
Trigger: GCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
3UTR GCA 72 bp CTCCCTCCACCCACACAGACACTGCACAAGAGGCCCTaGTTTGGACCACTAGTTCCTAAACATGGCAGAAAA +
Preference number: 3 (lower is better)
Translates to: LPPPTQTLHKRP*FGPLVPKHGRK
Trigger: TTTTCTGCCATGTTTAGGAACTAGTGGTCCAAAGCAGGGCCTCTTGTGCAGTGTCTGTGTGGGTGGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR CAA 90 bp GGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGGTGCCAATGATCACCTaGTTGACTCTTGACATAACG +
Preference number: 3 (lower is better)
Translates to: GAQTMSGVEWCFAASARVVPMIT*LTLDIT
Trigger: CGTTATGTCAAGAGTCAACAAGGTGATCATTGGCAC...CACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
3UTR GCA 72 bp AGGTGGACTCCTGTGCACTCCCACATTGCAAGGATGTaGTTCAGCAGCAACACTCAAGTCTCCTCTTCATTC +
Preference number: 3 (lower is better)
Translates to: RWTPVHSHIARM*FSSNTQVSSSF
Trigger: GAATGAAGAGGAGACTTGAGTGTTGCTGCTGAAGCACATCCTTGCAATGTGGGAGTGCACAGGAGTCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR CCA 72 bp TGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTaGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGT +
Preference number: 3 (lower is better)
Translates to: WRKFEHRCTDDE*GGMVFCCQCQS
Trigger: ACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
3UTR-3UTR CAA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGGCCAGTACTACCATGTaGTACACTTTTCCCGCTAAC +
Preference number: 3 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLASTTM*YTFPAN
Trigger: GTTAGCGGGAAAAGTGTACAACATGGTAGTACTGGC...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR TCA 72 bp AGATGCAGTAGGACTGAGATGAAACCCAAGACTGTGTaGGTGAGTGATCGGAATCACTCTCAGGTGATTCTG +
Preference number: 3 (lower is better)
Translates to: RCSRTEMKPKTV*VSDRNHSQVIL
Trigger: CAGAATCACCTGAGAGTGATTCCGATCACTCACTCACACAGTCTTGGGTTTCATCTCAGTCCTACTGCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR GCA 72 bp AACAAATTCACATTAAATGCAGTGAACCAGCCCAAATaGCTTCAATCCAGACACTGCCCCTCCAGCCATCCT +
Preference number: 3 (lower is better)
Translates to: NKFTLNAVNQPK*LQSRHCPSSHP
Trigger: AGGATGGCTGGAGGGGCAGTGTCTGGATTGAAGGCATTTGGGCTGGTTCACTGCATTTAATGTGAATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR CAA 90 bp AAGATCGCTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACCTGTGCACTCCCACATaGCAAGGATGTGCTTCAGCA +
Preference number: 3 (lower is better)
Translates to: KIALKEISKNRDLSLRTYLCTPT*QGCASA
Trigger: TGCTGAAGCACATCCTTGCAATGTGGGAGTGCACAG...GTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAGCGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR TCA 72 bp AAGACACAGTCCTGGATGTGTGCCCTTGTTACGGGGTaGCTAAAAAGGCAGGCAACAGTATCAAGGATTTTT +
Preference number: 3 (lower is better)
Translates to: KTQSWMCALVTG*LKRQATVSRIF
Trigger: AAAAATCCTTGATACTGTTGCCTGCCTTTTTAGTCACCCCGTAACAAGGGCACACATCCAGGACTGTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR CCA 72 bp CTCAGAACCTACCTCTGCCCAGTGTTAACCAAAATGTaGTTTCAAATCACCTGTTCAAAGCCCACAGGCTAT +
Preference number: 3 (lower is better)
Translates to: LRTYLCPVLTKM*FQITCSKPTGY
Trigger: ATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTGGTTAACACTGGGCAGAGGTAGGTTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR CAA 90 bp TTCAGGTTCTCTCTTTCTGATACTTACCCCTCCTCAAATAGGGAAACGGAGAGATGCCATTTGGAAATGTaGGCCCAGAGTTGCCAAATT +
Preference number: 3 (lower is better)
Translates to: FRFSLSDTYPSSNRETERCHLEM*AQSCQI
Trigger: AATTTGGCAACTCTGGGCCAACATTTCCAAATGGCA...TCTCTCCGTTTCCCTATTTGAGGAGGGGTAAGTATCAGAAAGAGAGAACCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR CAA 90 bp CATAAACATGTCAACAAAATTAGAGGATGTCCCTCTGCTTGCTGTGCTTGGTATTGCGCCCAGCCAGTGTaGTTTTATGGAAATGAGTCC +
Preference number: 3 (lower is better)
Translates to: HKHVNKIRGCPSACCAWYCAQPV*FYGNES
Trigger: GGACTCATTTCCATAAAACAACACTGGCTGGGCGCA...ATACCAAGCACAGCAAGCAGAGGGACATCCTCTAATTTTGTTGACATGTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR GCA 72 bp ATGGCATCAGATGTTACCCAACCACAAACTAACTACTaGCATTTGGAAATGTTGGCCCAGAGTTGCCAAATT +
Preference number: 3 (lower is better)
Translates to: MASDVTQPQTNY*HLEMLAQSCQI
Trigger: AATTTGGCAACTCTGGGCCAACATTTCCAAATGGCAGTAGTTAGTTTGTGGTTGGGTAACATCTGATGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR GCA 72 bp TCAAAGAATAGAGACCTTTCCCTCAGAACCTACCTCTaGCCAGTGTTAACCAAAATGTGGTTTCAAATCACC +
Preference number: 3 (lower is better)
Translates to: SKNRDLSLRTYL*PVLTKMWFQIT
Trigger: GGTGATTTGAAACCACATTTTGGTTAACACTGGGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR CCA 72 bp GTAGGAACTGCAGAAAACTGGAGATGTTCCATCCAATaGCATCAGATGTTACCCAACCACAAACTAACTACT +
Preference number: 3 (lower is better)
Translates to: VGTAENWRCSIQ*HQMLPNHKLTT
Trigger: AGTAGTTAGTTTGTGGTTGGGTAACATCTGATGCCATTGGATGGAACATCTCCAGTTTTCTGCAGTTCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR CAA 90 bp CATAAACATGTCAACAAAATTAGAGGATGTCCCTCTGCTTGCTGTGCTTGGTATTTTAGTTTCGCCATTTaGACCAGGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: HKHVNKIRGCPSACCAWYFSFAI*TRLVSN
Trigger: GTTTGAGACCAGCCTGGTCAAAATGGCGAAACTAAA...ATACCAAGCACAGCAAGCAGAGGGACATCCTCTAATTTTGTTGACATGTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR GCA 72 bp ATTGGGGTCATAAAGATTCTAAAAAGTATGCATTCCTaGAGTTCTGTTCTAGGCACTGTAAGAGCTGACCAG +
Preference number: 3 (lower is better)
Translates to: IGVIKILKSMHS*SSVLGTVRADQ
Trigger: CTGGTCAGCTCTTACAGTGCCTAGAACAGAACTGCAGGAATGCATACTTTTTAGAATCTTTATGACCCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR CCA 72 bp CAGATGTTACCCAACCACAAACTAACTACTGCCATTTaGAAATGTTGGCCCAGAGTTGCCAAATTTGAGTTT +
Preference number: 3 (lower is better)
Translates to: QMLPNHKLTTAI*KCWPRVAKFEF
Trigger: AAACTCAAATTTGGCAACTCTGGGCCAACATTTCCAAATGGCAGTAGTTAGTTTGTGGTTGGGTAACATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR-3UTR CAA 90 bp CAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTTGTTAAACATCCTCCAGCCATCCTTTaGAAACTTCTATTGCCATGT +
Preference number: 3 (lower is better)
Translates to: QNVVSNHLFKAHRLFVKHPPAIL*KLLLPC
Trigger: ACATGGCAATAGAAGTTTCAAAAGGATGGCTGGAGG...ATGTTTAACAAATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR GCA 72 bp GATAACATAAATGAGTTAAATGGATCCAGTAGGAACTaGAGAAAACTGGAGATGTTCCATCCAATGGCATCA +
Preference number: 3 (lower is better)
Translates to: DNINELNGSSRN*RKLEMFHPMAS
Trigger: TGATGCCATTGGATGGAACATCTCCAGTTTTCTGCAGTTCCTACTGGATCCATTTAACTCATTTATGTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR GCA 72 bp AAACATGTCAACAAAATTAGAGGATGTCCCTCTGCTTaGTGTGCTTGGTATTATACTTCTATACTGTTTCCC +
Preference number: 3 (lower is better)
Translates to: KHVNKIRGCPSA*CAWYYTSILFP
Trigger: GGGAAACAGTATAGAAGTATAATACCAAGCACAGCAAGCAGAGGGACATCCTCTAATTTTGTTGACATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp TGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAATGATCACGTGGTCTCGGAGGGCTaGGCGGCCGTCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CHSSQGPIGQDGLRANDHVVSEG*AAVILL
Trigger: CAGGAGGATGACGGCCGCTCAGCCCTCCGAGACCAC...GTGATCATTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR TCA 90 bp GCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAATGATCACCTTGTTGGTGGTCTCGGAGGGCTaGGCGGCCGTCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ALRAPLARMVFVPMITLLVVSEG*AAVILL
Trigger: CAGGAGGATGACGGCCGCTCAGCCCTCCGAGACCAC...CAACAAGGTGATCATTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp TGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTGCGTTGCTCCAGCGGTaGTCCGTGATGATCTGGCGC +
Preference number: 4 (lower is better)
Translates to: CQSVSSCHSSQGPIGQDGALLQR*SVMIWR
Trigger: GCGCCAGATCATCACGGACCACCGCTGGAGCAACGC...ACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTCACACTCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp GCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAATGATCACCTTGTTGCGGCCGTCATCCTCCTaGCCTCTCTGCGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: ALRAPLARMVFVPMITLLRPSSS*PLCGSA
Trigger: AGCTGATCCGCAGAGAGGGCAGGAGGATGACGGCCG...CAACAAGGTGATCATTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp TTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTCCATGTTGCCCACGGTaGTCTCGGAGGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: FCCQCQSVSSCHSSQGPIPCCPR*SRRAER
Trigger: CCGCTCAGCCCTCCGAGACCACCGTGGGCAACATGG...AATGGGGCCCTGAGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp GAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAACTCTCAGGGCCCCATTaGCCAGGATGGTCTTCGTGC +
Preference number: 4 (lower is better)
Translates to: EFLSQLSGPHWPGWSSCQLSGPH*PGWSSC
Trigger: GCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAG...TTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp AGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTCTCTCCGCACCATGTTaGCCACGGTGGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: RCTDDEWGGMVFCCQCQSLSAPC*PRWSRR
Trigger: CCTCCGAGACCACCGTGGGCAACATGGTGCGGAGAG...ACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp CCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAATGATCTCGTCGCTGCGTCCATaGAGTCTGCCATACTCCTCC +
Preference number: 4 (lower is better)
Translates to: PVTALRAPLARMVFVPMISSLRP*SLPYSS
Trigger: GGAGGAGTATGGCAGACTCCATGGACGCAGCGACGA...GATCATTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp ACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAATGATCACCTTGCTCTCAGGGCCCCATTaGCCAGGATGGTCTTCGTGC +
Preference number: 4 (lower is better)
Translates to: TALRAPLARMVFVPMITLLSGPH*PGWSSC
Trigger: GCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAG...CAAGGTGATCATTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp ATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGACGGCCGTCATCCTCCTaGCCTCTCTGCGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: IGAQTMSGVEWCFAASARRPSSS*PLCGSA
Trigger: AGCTGATCCGCAGAGAGGGCAGGAGGATGACGGCCG...TCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp GTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCGATCACTCTCGTCGCTaGGTCCATGGAGTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: VFCCQCQSVSSCHSSQGPDHSRR*VHGVCH
Trigger: ATGGCAGACTCCATGGACGCAGCGACGAGAGTGATC...GGGGCCCTGAGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp GAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGCTCCAGAGCCTGGGCTaGAATGTTCTCCATTGTCCC +
Preference number: 4 (lower is better)
Translates to: ECEFLSQLSGPHWPGWSSLQSLG*NVLHCP
Trigger: GGGACAATGGAGAACATTGCAGCCCAGGCTCTGGAG...CGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTCACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp GGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTCGTCGCTGCGTCCATaGAGTCTGCCATACTCCTCC +
Preference number: 4 (lower is better)
Translates to: GAQTMSGVEWCFAASARVSSLRP*SLPYSS
Trigger: GGAGGAGTATGGCAGACTCCATGGACGCAGCGACGA...CACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR TCA 90 bp AACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCGCTCTCGATCCTCTCTaGCAACTCCGAGCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: NIGAQTMSGVEWCFAASAALDPL*QLRALR
Trigger: GCGAAGGGCTCGGAGTTGTCAGAGAGGATCGAGAGC...GGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556028.5
CDS-3UTR TCA 90 bp GATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTTGCAGGGACTCCTGCTaGTCACTCTCGTCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: DEWGGMVFCCQCQSVSSCCRDSC*SLSSLR
Trigger: ACGCAGCGACGAGAGTGATCAGCAGGAGTCCCTGCA...ACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR TCA 90 bp TGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCATGGGAGGGAAAGGCTaGTTCTGGCAGAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CEFLSQLSGPHWPGWSSCMGGKG*FWQKGA
Trigger: TGCTCCTTTCTGCCAGAATCAGCCTTTCCCTCCCAT...GCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR GCA 90 bp GGGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGACTCTCCGCACCATGTTaGCCACGGTGGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GELWRKFEHRCTDDEWGGLSAPC*PRWSRR
Trigger: CCTCCGAGACCACCGTGGGCAACATGGTGCGGAGAG...TCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp GGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGGATCACTCTCGTCGCTaGGTCCATGGAGTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GAQTMSGVEWCFAASARVDHSRR*VHGVCH
Trigger: ATGGCAGACTCCATGGACGCAGCGACGAGAGTGATC...CACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp AGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTTGGTCCGTGATGATCTaGCGCAGCAACCCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: RCTDDEWGGMVFCCQCQSWSVMI*RSNPRV
Trigger: GACCCTAGGGTTGCTGCGCCAGATCATCACGGACCA...ACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR TCA 90 bp GGGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGATGCAGGGACTCCTGCTaGTCACTCTCGTCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GELWRKFEHRCTDDEWGGCRDSC*SLSSLR
Trigger: ACGCAGCGACGAGAGTGATCAGCAGGAGTCCCTGCA...TCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR TCA 90 bp GTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGTTCGGGCAGCCTCTTTaGGGAAGGCCTCTACTGTTC +
Preference number: 4 (lower is better)
Translates to: VGWNGVLLPVPECEFLSQFGQPL*GRPLLF
Trigger: GAACAGTAGAGGCCTTCCTCAAAGAGGCTGCCCGAA...CTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR TCA 90 bp GTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAATGATCACCTTCACAGCCATTTCATaGCCCTGCAATGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: VTALRAPLARMVFVPMITFTAIS*PCNGRE
Trigger: TTCCCTCCCATTGCAGGGTCATGAAATGGCTGTGAA...GGTGATCATTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR GCA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGCCATTTCCTCGGAGCTaGGCGGCCCACCACCCCGCT +
Preference number: 4 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLPFPRS*AAHHPA
Trigger: AGCGGGGTGGTGGGCCGCGCAGCTCCGAGGAAATGG...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp TGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTCCATTTCCTCGGAGCTaGGCGGCCCACCACCCCGCT +
Preference number: 4 (lower is better)
Translates to: WRKFEHRCTDDEWGGMVFPFPRS*AAHHPA
Trigger: AGCGGGGTGGTGGGCCGCGCAGCTCCGAGGAAATGG...AAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp GTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAATGATCACCGTGTTTTGCTGCCAGTaGCAGAGTGTGAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VTALRAPLARMVFVPMITVFCCQ*QSVSSC
Trigger: ACAGGAACTCACACTCTGGCACTGGCAGCAAAACAC...GGTGATCATTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp AGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCGCGTTGCTCCAGCGGTaGTCCGTGATGATCTGGCGC +
Preference number: 4 (lower is better)
Translates to: SLNIGAQTMSGVEWCFAAALLQR*SVMIWR
Trigger: GCGCCAGATCATCACGGACCACCGCTGGAGCAACGC...GGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp GAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAAATGTGCTCCAGAGCCTaGGCTGCAATGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: EFLSQLSGPHWPGWSSCQMCSRA*AAMFSI
Trigger: AATGGAGAACATTGCAGCCCAGGCTCTGGAGCACAT...TTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp TGGCCAGTACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCACCAGCAAGGCAGGGGTaGGAGGTGGGCACCCCTGAT +
Preference number: 4 (lower is better)
Translates to: WPVLPCCTLFPLTTALYAPARQG*EVGTPD
Trigger: ATCAGGGGTGCCCACCTCCCACCCCTGCCTTGCTGG...TGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGTACTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTGTGGTCTCGGAGGGCTaGGCGGCCGTCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLGTVRADQKESFYPYNLVVSEG*AAVILL
Trigger: CAGGAGGATGACGGCCGCTCAGCCCTCCGAGACCAC...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp GTGCCAATGATCACCTTGTTGACTCTTGACATAACGGCAAAAATGGCAGCATCACCATTTCCTCGGAGCTaGGCGGCCCACCACCCCGCT +
Preference number: 4 (lower is better)
Translates to: VPMITLLTLDITAKMAASPFPRS*AAHHPA
Trigger: AGCGGGGTGGTGGGCCGCGCAGCTCCGAGGAAATGG...TGATGCTGCCATTTTTGCCGTTATGTCAAGAGTCAACAAGGTGATCATTGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp GCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAATGATCACCTTGTTGGGAATGGTGTTTTGCTaGCAGTGCCAGAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: ALRAPLARMVFVPMITLLGMVFC*QCQSVS
Trigger: ACTCACACTCTGGCACTGGCAGCAAAACACCATTCC...CAACAAGGTGATCATTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp AGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGGAATGGTGTTTTGCTaGCAGTGCCAGAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SVSSCHSSQGPIGQDGLRGMVFC*QCQSVS
Trigger: ACTCACACTCTGGCACTGGCAGCAAAACACCATTCC...ACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp GTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGATGAGTGGGGTGGAATaGTGTTTTGCTGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VGWNGVLLPVPECEFLSQMSGVE*CFAASA
Trigger: GGCACTGGCAGCAAAACACCATTCCACCCCACTCAT...CTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp AAATGCAGTGAACCAGCCCAAATGCCTTCAATCCAGACACTGCCCCTCCAGCCAAGCCTCCCGAGTAGCTaGGACTACAGGTACCCACAA +
Preference number: 4 (lower is better)
Translates to: KCSEPAQMPSIQTLPLQPSLPSS*DYRYPQ
Trigger: TTGTGGGTACCTGTAGTCCCAGCTACTCGGGAGGCT...TGGCTGGAGGGGCAGTGTCTGGATTGAAGGCATTTGGGCTGGTTCACTGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp TGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTTGTCTCAATACCTGCTaGCAGAAAGGAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: CQSVSSCHSSQGPIGQDGCLNTC*QKGAHS
Trigger: AGAGTGTGCTCCTTTCTGCCAGCAGGTATTGAGACA...ACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTCACACTCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556028.5
CDS-3UTR TCA 90 bp AACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCATCACCTCATTGGAGTaGATGTGCTCCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: NIGAQTMSGVEWCFAASAITSLE*MCSRAW
Trigger: CCAGGCTCTGGAGCACATTCACTCCAATGAGGTGAT...GGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR TCA 90 bp CCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTAGAAGCCAATGGTCATaGTCACCTCATTGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: PECEFLSQLSGPHWPGWSRSQWS*SPHWSE
Trigger: TTCACTCCAATGAGGTGATCATGACCATTGGCTTCT...AGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTCACACTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp GGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTGGTGGAATGGTGTTTTaGTGCCAGTGCCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: GGMVFCCQCQSVSSCHSSGGMVF*CQCQSV
Trigger: CACACTCTGGCACTGGCAGCAAAACACCATTCCACC...AGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp TCTTCTTCATTGGGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGCCATGTTGCCCACGGTaGTCTCGGAGGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: SSSLGNCGESLNIGAQTMPCCPR*SRRAER
Trigger: CCGCTCAGCCCTCCGAGACCACCGTGGGCAACATGG...CATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCCCAATGAAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR CCA 90 bp GTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGTGCACAGACGATGAGTaGGGTGGAATGGTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: VGWNGVLLPVPECEFLSQCTDDE*GGMVFC
Trigger: GCAAAACACCATTCCACCCCACTCATCGTCTGTGCA...CTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp GGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTTCATGACCCTGCAATaGGAGGGAAAGGCTGATTCT +
Preference number: 4 (lower is better)
Translates to: GAQTMSGVEWCFAASARVFMTLQ*EGKADS
Trigger: AGAATCAGCCTTTCCCTCCCATTGCAGGGTCATGAA...CACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR TCA 90 bp TGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAATCACCTCATTGGAGTaGATGTGCTCCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: WNGVLLPVPECEFLSQLSITSLE*MCSRAW
Trigger: CCAGGCTCTGGAGCACATTCACTCCAATGAGGTGAT...TGAGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTCGGCCGTCATCCTCCTaGCCTCTCTGCGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: VLGTVRADQKESFYPYNLRPSSS*PLCGSA
Trigger: AGCTGATCCGCAGAGAGGGCAGGAGGATGACGGCCG...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp GGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGAAGTTTGAACATAGGTaGACAGACGATGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GAQTMSGVEWCFAASARVKFEHR*TDDEWG
Trigger: ACCCCACTCATCGTCTGTGCACCTATGTTCAAACTT...CACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp GAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAATCTGCTACAATGACATaGAATTTCCTCTTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: EFLSQLSGPHWPGWSSCQSATMT*NFLFRA
Trigger: TGCCCGAAAGAGGAAATTCCATGTCATTGTAGCAGA...TTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp GTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCATGAGTCTTCTTCATTaGGGAACTGTGGAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: VSSCHSSQGPIGQDGLRAMSLLH*GTVEKV
Trigger: AACTTTCTCCACAGTTCCCCAATGAAGAAGACTCAT...GGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR TCA 90 bp CTTTTCTGGGAAGCTTTAAACAGATTCCCAGGTAGTAACCCTGAGATCAGATGCTGCAGGGACTCCTGCTaGTCACTCTCGTCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: LFWEALNRFPGSNPEIRCCRDSC*SLSSLR
Trigger: ACGCAGCGACGAGAGTGATCAGCAGGAGTCCCTGCA...GCATCTGATCTCAGGGTTACTACCTGGGAATCTGTTTAAAGCTTCCCAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp AAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCTTCGGGCAGCCTCTTTaGGGAAGGCCTCTACTGTTC +
Preference number: 4 (lower is better)
Translates to: KFEHRCTDDEWGGMVFCCFGQPL*GRPLLF
Trigger: GAACAGTAGAGGCCTTCCTCAAAGAGGCTGCCCGAA...GCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp ACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAAACACAAACTCTCCGCACCATGTTaGCCACGGTGGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TTMLYTFPANYSPLCKHKLSAPC*PRWSRR
Trigger: CCTCCGAGACCACCGTGGGCAACATGGTGCGGAGAG...TTTGTGTTTGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp AACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGCTCCAGAGCCTGGGCTaGAATGTTCTCCATTGTCCC +
Preference number: 4 (lower is better)
Translates to: NCGESLNIGAQTMSGVEWLQSLG*NVLHCP
Trigger: GGGACAATGGAGAACATTGCAGCCCAGGCTCTGGAG...CCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp TTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTAAGTTTGAACATAGGTaGACAGACGATGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: FCCQCQSVSSCHSSQGPIKFEHR*TDDEWG
Trigger: ACCCCACTCATCGTCTGTGCACCTATGTTCAAACTT...AATGGGGCCCTGAGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp GGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTCTGCTACAATGACATaGAATTTCCTCTTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GAQTMSGVEWCFAASARVSATMT*NFLFRA
Trigger: TGCCCGAAAGAGGAAATTCCATGTCATTGTAGCAGA...CACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp CTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCCTCTCAGGGCCCCATTaGCCAGGATGGTCTTCGTGC +
Preference number: 4 (lower is better)
Translates to: LSKRYQRIETFPSEPTSALSGPH*PGWSSC
Trigger: GCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAG...GGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp GGGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGATGCACAGACGATGAGTaGGGTGGAATGGTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: GELWRKFEHRCTDDEWGGCTDDE*GGMVFC
Trigger: GCAAAACACCATTCCACCCCACTCATCGTCTGTGCA...TCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
3UTR CAA 72 bp AAGTGGGAGCCACTGCATCTGGCCAGTACTACCATGTaGTACACTTTTCCCGCTAACTACAGCCCTCTATGC +
Preference number: 4 (lower is better)
Translates to: KWEPLHLASTTM*YTFPANYSPLC
Trigger: GCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGTACTGGCCAGATGCAGTGGCTCCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp GGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAGAGAAGCCAATGGTCATaGTCACCTCATTGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: GMVFCCQCQSVSSCHSSQRSQWS*SPHWSE
Trigger: TTCACTCCAATGAGGTGATCATGACCATTGGCTTCT...CTGAGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR TCA 90 bp GGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCACCTTGTTGACTCTTaGCATAACGGCAAAAATGGC +
Preference number: 4 (lower is better)
Translates to: GGMVFCCQCQSVSSCHSSHLVDS*HNGKNG
Trigger: GCCATTTTTGCCGTTATGTCAAGAGTCAACAAGGTG...AGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR TCA 90 bp GGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAGCACCTTGTTGACTCTTaGCATAACGGCAAAAATGGC +
Preference number: 4 (lower is better)
Translates to: GMVFCCQCQSVSSCHSSQHLVDS*HNGKNG
Trigger: GCCATTTTTGCCGTTATGTCAAGAGTCAACAAGGTG...CTGAGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR TCA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTCAGGGCAATGCACGCTaGCCTTCTCCAGAATGTCCC +
Preference number: 4 (lower is better)
Translates to: VLGTVRADQKESFYPYNLQGNAR*PSPECP
Trigger: GGGACATTCTGGAGAAGGTCAGCGTGCATTGCCCTG...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp TGGCCAGTACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAGCCCTTGTTACGGGGTaGCTAAAAAGGCAGGCAACA +
Preference number: 4 (lower is better)
Translates to: WPVLPCCTLFPLTTALYAALVTG*LKRQAT
Trigger: TGTTGCCTGCCTTTTTAGTCACCCCGTAACAAGGGC...TGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGTACTGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp AAATGCAGTGAACCAGCCCAAATGCCTTCAATCCAGACACTGCCCCTCCAGCCATTAGTTTCGCCATTTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: KCSEPAQMPSIQTLPLQPLVSPF*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGTCAAAATGGCGAAACTAA...TGGCTGGAGGGGCAGTGTCTGGATTGAAGGCATTTGGGCTGGTTCACTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp CTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCTCCTCCTGCCCTCTCTaGGGATCAGCTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: LSKRYQRIETFPSEPTSASSCPL*GSAPSA
Trigger: AGCTGATGGAGCTGATCCGCAGAGAGGGCAGGAGGA...GGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp TTGGGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGTGTTTTGCTGCCAGTaGCAGAGTGTGAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LGNCGESLNIGAQTMSGVVFCCQ*QSVSSC
Trigger: ACAGGAACTCACACTCTGGCACTGGCAGCAAAACAC...CACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp ATTGGGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGTGGAATGGTGTTTTaGTGCCAGTGCCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: IGELWRKFEHRCTDDEWGGGMVF*CQCQSV
Trigger: CACACTCTGGCACTGGCAGCAAAACACCATTCCACC...ACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp CTTTTCTGGGAAGCTTTAAACAGATTCCCAGGTAGTAACCCTGAGATCAGATGCTGGTCCGTGATGATCTaGCGCAGCAACCCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: LFWEALNRFPGSNPEIRCWSVMI*RSNPRV
Trigger: GACCCTAGGGTTGCTGCGCCAGATCATCACGGACCA...GCATCTGATCTCAGGGTTACTACCTGGGAATCTGTTTAAAGCTTCCCAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp CTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCGGCGGAATCCACACCTaGCAGACCACACAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LSKRYQRIETFPSEPTSAGGIHT*QTTQFA
Trigger: TGCAAACTGTGTGGTCTGGCAGGTGTGGATTCCGCC...GGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp AAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCCAGTGTTAACCAAAATGGATCACTCTCGTCGCTaGGTCCATGGAGTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: KNRDLSLRTYLCPVLTKMDHSRR*VHGVCH
Trigger: ATGGCAGACTCCATGGACGCAGCGACGAGAGTGATC...CATTTTGGTTAACACTGGGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp TGGCCAGTACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCACTTCAATCCAGACACTaGCCCTCCAGCCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: WPVLPCCTLFPLTTALYALQSRH*PSSHPF
Trigger: AAAAGGATGGCTGGAGGGGCAGTGTCTGGATTGAAG...TGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGTACTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp CAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTTGTTAAACATCCATGTTGCCCACGGTaGTCTCGGAGGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: QNVVSNHLFKAHRLFVKHPCCPR*SRRAER
Trigger: CCGCTCAGCCCTCCGAGACCACCGTGGGCAACATGG...ATGTTTAACAAATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp AAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCATGTGCTCCAGAGCCTaGGCTGCAATGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: KFEHRCTDDEWGGMVFCCMCSRA*AAMFSI
Trigger: AATGGAGAACATTGCAGCCCAGGCTCTGGAGCACAT...GCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp AGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCATGAGTGGGGTGGAATaGTGTTTTGCTGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RKFEHRCTDDEWGGMVFCMSGVE*CFAASA
Trigger: GGCACTGGCAGCAAAACACCATTCCACCCCACTCAT...GCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp TTGCAAGGATGTGCTTCAGCAGCAACACTCAAGTCTCCTCTTCATTCTGTATCTAGTGCAGTGGCCCAATaGCACTGCTCACTGCAACCT +
Preference number: 4 (lower is better)
Translates to: LQGCASAATLKSPLHSVSSAVAQ*HCSLQP
Trigger: AGGTTGCAGTGAGCAGTGCCATTGGGCCACTGCACT...AGATACAGAATGAAGAGGAGACTTGAGTGTTGCTGCTGAAGCACATCCTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp AAATGCAGTGAACCAGCCCAAATGCCTTCAATCCAGACACTGCCCCTCCAGCCAACATGGCAGAAAATCTaGATCACCTGGGAGACTTTT +
Preference number: 4 (lower is better)
Translates to: KCSEPAQMPSIQTLPLQPTWQKI*ITWETF
Trigger: AAAAGTCTCCCAGGTGATCCAGATTTTCTGCCATGT...TGGCTGGAGGGGCAGTGTCTGGATTGAAGGCATTTGGGCTGGTTCACTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp AAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCTGGCAGCATCAGTCATaGCAGTTGTCTCAATACCTG +
Preference number: 4 (lower is better)
Translates to: KFEHRCTDDEWGGMVFCCWQHQS*QLSQYL
Trigger: CAGGTATTGAGACAACTGTCATGACTGATGCTGCCA...GCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGGGAATGGTGTTTTGCTaGCAGTGCCAGAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLGMVFC*QCQSVS
Trigger: ACTCACACTCTGGCACTGGCAGCAAAACACCATTCC...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTGGTGGAATGGTGTTTTaGTGCCAGTGCCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: VLGTVRADQKESFYPYNLGGMVF*CQCQSV
Trigger: CACACTCTGGCACTGGCAGCAAAACACCATTCCACC...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp TGGCCAGTACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAGGATCACAACTCAAATaGCTACAGGGGTTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: WPVLPCCTLFPLTTALYAGSQLK*LQGLGR
Trigger: TCTGCCTAACCCCTGTAGGCATTTGAGTTGTGATCC...TGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGTACTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp CTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCATAGGCGTGAGCCATTaGGCCCAGCCAGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LSKRYQRIETFPSEPTSAIGVSH*AQPVLF
Trigger: AAACAACACTGGCTGGGCGCAATGGCTCACGCCTAT...GGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp CATAAACATGTCAACAAAATTAGAGGATGTCCCTCTGCTTGCTGTGCTTGGTATTCGTCGCTGCGTCCATaGAGTCTGCCATACTCCTCC +
Preference number: 4 (lower is better)
Translates to: HKHVNKIRGCPSACCAWYSSLRP*SLPYSS
Trigger: GGAGGAGTATGGCAGACTCCATGGACGCAGCGACGA...ATACCAAGCACAGCAAGCAGAGGGACATCCTCTAATTTTGTTGACATGTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp CAGGTCACTAAGAGGCTCCAAAATCAACAAGTTAAGCCCTGCTGCTCTGTTAAGTGCACAGACGATGAGTaGGGTGGAATGGTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: QVTKRLQNQQVKPCCSVKCTDDE*GGMVFC
Trigger: GCAAAACACCATTCCACCCCACTCATCGTCTGTGCA...CTTAACAGAGCAGCAGGGCTTAACTTGTTGATTTTGGAGCCTCTTAGTGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp AACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCTTCATTGGGGAACTGTaGAGAAAGTTTGAACATAGG +
Preference number: 4 (lower is better)
Translates to: NIGAQTMSGVEWCFAASAFIGEL*RKFEHR
Trigger: CCTATGTTCAAACTTTCTCCACAGTTCCCCAATGAA...GGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CCA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGGAGGGTAATGAGCTCTaGGGGAACGTAGTCAAACAC +
Preference number: 4 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLEGNEL*GNVVKH
Trigger: GTGTTTGACTACGTTCCCCCAGAGCTCATTACCCTC...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp TTCAGGTTCTCTCTTTCTGATACTTACCCCTCCTCAAATAGGGAAACGGAGAGAGGCAAGACACAGTCCTaGATGTGTGCCCTTGTTACG +
Preference number: 4 (lower is better)
Translates to: FRFSLSDTYPSSNRETERGKTQS*MCALVT
Trigger: CGTAACAAGGGCACACATCCAGGACTGTGTCTTGCC...TCTCTCCGTTTCCCTATTTGAGGAGGGGTAAGTATCAGAAAGAGAGAACCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp ATTTGGAAATGTTGGCCCAGAGTTGCCAAATTTGAGTTTTCAAGAAAAGCAAGAGCTCTCGATCCTCTCTaGCAACTCCGAGCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: IWKCWPRVAKFEFSRKARALDPL*QLRALR
Trigger: GCGAAGGGCTCGGAGTTGTCAGAGAGGATCGAGAGC...TCTTGCTTTTCTTGAAAACTCAAATTTGGCAACTCTGGGCCAACATTTCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp ACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAAACACAAAATCACCTCATTGGAGTaGATGTGCTCCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TTMLYTFPANYSPLCKHKITSLE*MCSRAW
Trigger: CCAGGCTCTGGAGCACATTCACTCCAATGAGGTGAT...TTTGTGTTTGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp CAGGTCACTAAGAGGCTCCAAAATCAACAAGTTAAGCCCTGCTGCTCTGTTAAGTGGCAGCATCAGTCATaGCAGTTGTCTCAATACCTG +
Preference number: 4 (lower is better)
Translates to: QVTKRLQNQQVKPCCSVKWQHQS*QLSQYL
Trigger: CAGGTATTGAGACAACTGTCATGACTGATGCTGCCA...CTTAACAGAGCAGCAGGGCTTAACTTGTTGATTTTGGAGCCTCTTAGTGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp TGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGGCAGCATCAGTCATaGCAGTTGTCTCAATACCTG +
Preference number: 4 (lower is better)
Translates to: WRKFEHRCTDDEWGGMVFWQHQS*QLSQYL
Trigger: CAGGTATTGAGACAACTGTCATGACTGATGCTGCCA...AAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR GCA 90 bp TGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAAGTTGTCTCAATACCTaGTTTGGACAAATTCACAGC +
Preference number: 4 (lower is better)
Translates to: WNGVLLPVPECEFLSQLSSCLNT*FGQIHS
Trigger: GCTGTGAATTTGTCCAAAGCAGGTATTGAGACAACT...TGAGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR GCA 90 bp AAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCCAGTGTTAACCAAAATGGTGTTTTGCTGCCAGTaGCAGAGTGTGAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: KNRDLSLRTYLCPVLTKMVFCCQ*QSVSSC
Trigger: ACAGGAACTCACACTCTGGCACTGGCAGCAAAACAC...CATTTTGGTTAACACTGGGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp CTTTTCTGGGAAGCTTTAAACAGATTCCCAGGTAGTAACCCTGAGATCAGATGCTGTGCACTCCCACATTaGAAGGATGTGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LFWEALNRFPGSNPEIRCCALPH*KDVLQQ
Trigger: CTGCTGAAGCACATCCTTGCAATGTGGGAGTGCACA...GCATCTGATCTCAGGGTTACTACCTGGGAATCTGTTTAAAGCTTCCCAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp CTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCTTAGGTGGACTCCTGTaGACTCCCACATTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LSKRYQRIETFPSEPTSALGGLL*TPTLQG
Trigger: TCCTTGCAATGTGGGAGTGCACAGGAGTCCACCTAA...GGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp TTATTGGTAGAGCCTAGAAAAAGTGTCATAGCCATTTCTGAGCAAAAATCTGTAGCGTTGCTCCAGCGGTaGTCCGTGATGATCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LLVEPRKSVIAISEQKSVALLQR*SVMIWR
Trigger: GCGCCAGATCATCACGGACCACCGCTGGAGCAACGC...TACAGATTTTTGCTCAGAAATGGCTATGACACTTTTTCTAGGCTCTACCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp ACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAAACACAAAGTCCCCTTCTGTGAATaGCAGGACTTCTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TTMLYTFPANYSPLCKHKVPFCE*QDFFRS
Trigger: GCTCCTGAAGAAGTCCTGCCATTCACAGAAGGGGAC...TTTGTGTTTGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp AAGATCGCTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACCAGGCTAAAGTGCAGTaGCCCAATGGCACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: KIALKEISKNRDLSLRTYQAKVQ*PNGTAH
Trigger: GTGAGCAGTGCCATTGGGCCACTGCACTTTAGCCTG...GTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAGCGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp AGATTGGAGGAGATGGGGAGAAGGACAAATAGGGAGAGATTACTTAATGGGTACGCAGATTGGAGGAGATaGGGAGAAGGACAAATAGGG +
Preference number: 4 (lower is better)
Translates to: RLEEMGRRTNRERLLNGYADWRR*GEGQIG
Trigger: CCCTATTTGTCCTTCTCCCCATCTCCTCCAATCTGC...GTACCCATTAAGTAATCTCTCCCTATTTGTCCTTCTCCCCATCTCCTCCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR TCA 90 bp TGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTCACACTCTGCTACAATaGCATGGAATTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: CGESLNIGAQTMSGVEWCHTLLQ*HGISSF
Trigger: GAAAGAGGAAATTCCATGTCATTGTAGCAGAGTGTG...ACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR TCA 90 bp GGGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGACACAAACTTATGAAATaGGTCTTCTTCATTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GELWRKFEHRCTDDEWGGHKLMK*VFFIGE
Trigger: TTCCCCAATGAAGAAGACTCATTTCATAAGTTTGTG...TCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR TCA 90 bp GGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAAGGAGCCACAAACTTATaGAATGAGTCTTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: GNCGESLNIGAQTMSGVEGATNL*NESSSL
Trigger: CAATGAAGAAGACTCATTTCATAAGTTTGTGGCTCC...TTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR TCA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGTGGGGCCAGGAGCAGTaGATTGTAAAGGAAACTATA +
Preference number: 4 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLWGQEQ*IVKETI
Trigger: TATAGTTTCCTTTACAATTCACTGCTCCTGGCCCCA...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp TGGCCAGTACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCATACTGTTTTAGACTATaGACAAACTTTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WPVLPCCTLFPLTTALYAYCFRL*TNFGAR
Trigger: CCTGGCCCCAAAGTTTGTTCATAGTCTAAAACAGTA...TGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGTACTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp ATTTGGAAATGTTGGCCCAGAGTTGCCAAATTTGAGTTTTCAAGAAAAGCAAGAACTCCTGACCTCAAGTaGTCTGCCCTCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IWKCWPRVAKFEFSRKARTPDLK*SALLSL
Trigger: GAGGCTGAGGAGGGCAGATCACTTGAGGTCAGGAGT...TCTTGCTTTTCTTGAAAACTCAAATTTGGCAACTCTGGGCCAACATTTCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGCAGGTTCTCTCTTTCTaGTACTTACCCCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLQVLSF*YLPLLK
Trigger: TTTGAGGAGGGGTAAGTATCAGAAAGAGAGAACCTG...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp TTAAATGGATCCAGTAGGAACTGCAGAAAACTGGAGATGTTCCATCCAATGGCATCAAACACAGGGCAATaGACGCTGACCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LNGSSRNCRKLEMFHPMASNTGQ*TLTFSR
Trigger: TCTGGAGAAGGTCAGCGTGCATTGCCCTGTGTTTGA...TGCCATTGGATGGAACATCTCCAGTTTTCTGCAGTTCCTACTGGATCCATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGCACATTGCAAGGATGTaGTTCAGCAGCAACACTCAA +
Preference number: 4 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLHIARM*FSSNTQ
Trigger: TTGAGTGTTGCTGCTGAAGCACATCCTTGCAATGTG...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGGGATGTCCCTCTGCTTaGTGTGCTTGGTATTATACT +
Preference number: 4 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLGCPSA*CAWYYT
Trigger: AGTATAATACCAAGCACAGCAAGCAGAGGGACATCC...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp TTAAATGGATCCAGTAGGAACTGCAGAAAACTGGAGATGTTCCATCCAATGGCAATGTGCTCCAGAGCCTaGGCTGCAATGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: LNGSSRNCRKLEMFHPMAMCSRA*AAMFSI
Trigger: AATGGAGAACATTGCAGCCCAGGCTCTGGAGCACAT...TGCCATTGGATGGAACATCTCCAGTTTTCTGCAGTTCCTACTGGATCCATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp AGAGAGTGGTGGTTGTACAATGCTGTGAATGTACTAGATATCACTAAATTGTATCTCTCAGGGCCCCATTaGCCAGGATGGTCTTCGTGC +
Preference number: 4 (lower is better)
Translates to: REWWLYNAVNVLDITKLYLSGPH*PGWSSC
Trigger: GCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAG...ATACAATTTAGTGATATCTAGTACATTCACAGCATTGTACAACCACCACTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CCA 90 bp AAGATCGCTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACATGAGTGGGGTGGAATaGTGTTTTGCTGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KIALKEISKNRDLSLRTYMSGVE*CFAASA
Trigger: GGCACTGGCAGCAAAACACCATTCCACCCCACTCAT...GTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAGCGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp TTGCAAGGATGTGCTTCAGCAGCAACACTCAAGTCTCCTCTTCATTCTGTATCTCACCTTGTTGACTCTTaGCATAACGGCAAAAATGGC +
Preference number: 4 (lower is better)
Translates to: LQGCASAATLKSPLHSVSHLVDS*HNGKNG
Trigger: GCCATTTTTGCCGTTATGTCAAGAGTCAACAAGGTG...AGATACAGAATGAAGAGGAGACTTGAGTGTTGCTGCTGAAGCACATCCTTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp CTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCTGCTCTGTTAAGATCTaGAAGGCAAGACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: LSKRYQRIETFPSEPTSACSVKI*KARHSP
Trigger: AGGACTGTGTCTTGCCTTTCAGATCTTAACAGAGCA...GGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp TGGCCAGTACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCACCTATAAACACTACATaGGACTATCCTTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: WPVLPCCTLFPLTTALYAPINTT*DYPFLG
Trigger: TCCCAGAAAAGGATAGTCTCATGTAGTGTTTATAGG...TGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGTACTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp TGGCCAGTACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAAGTTGTCTCAATACCTaGTTTGGACAAATTCACAGC +
Preference number: 4 (lower is better)
Translates to: WPVLPCCTLFPLTTALYASCLNT*FGQIHS
Trigger: GCTGTGAATTTGTCCAAAGCAGGTATTGAGACAACT...TGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGTACTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp AGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTACAGTGGAGAAAAAGTTGGTGGAATGGTGTTTTaGTGCCAGTGCCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: RERLLNGYRVFFYSGEKVGGMVF*CQCQSV
Trigger: CACACTCTGGCACTGGCAGCAAAACACCATTCCACC...AACTTTTTCTCCACTGTAGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR GCA 90 bp CTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCAAGTTTGAACATAGGTaGACAGACGATGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LSKRYQRIETFPSEPTSAKFEHR*TDDEWG
Trigger: ACCCCACTCATCGTCTGTGCACCTATGTTCAAACTT...GGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp CCAGTGTTAACCAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATAATGGCACTGCTCACTaGAACCTCTACTTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: PVLTKMWFQITCSKPTGYNGTAH*NLYFPS
Trigger: ACTTGGGAAGTAGAGGTTGCAGTGAGCAGTGCCATT...ATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTGGTTAACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp CCAGTGTTAACCAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATAGTTCCTTGCCTCACTaGTGCTCTTACTCCAAACCA +
Preference number: 4 (lower is better)
Translates to: PVLTKMWFQITCSKPTGYSSLPH*CSYSKP
Trigger: TGGTTTGGAGTAAGAGCAGCAGTGAGGCAAGGAACT...ATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTGGTTAACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp AGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTACAGTGGAGAAAAAGTTATGAGTGGGGTGGAATaGTGTTTTGCTGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RERLLNGYRVFFYSGEKVMSGVE*CFAASA
Trigger: GGCACTGGCAGCAAAACACCATTCCACCCCACTCAT...AACTTTTTCTCCACTGTAGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CCA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTGGAACTGCAGAAAACTaGAGATGTTCCATCCAATGG +
Preference number: 4 (lower is better)
Translates to: VLGTVRADQKESFYPYNLGTAEN*RCSIQW
Trigger: CCATTGGATGGAACATCTCCAGTTTTCTGCAGTTCC...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp AGAAGGACAAATAGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTACAGTGAGACAGGAGCAGATTaGAGGAGATGGGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RRTNRERLLNGYRVFFYSETGAD*RRWGEG
Trigger: TCCTTCTCCCCATCTCCTCCAATCTGCTCCTGTCTC...ACTGTAGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCTATTTGTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554748.2
3UTR CAA 72 bp TGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTaGTTAAACATGCAGATTCTTAGTGCTCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: WFQITCSKPTGY*LNMQILSAPST
Trigger: GGTGGAGGGAGCACTAAGAATCTGCATGTTTAACAAATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp ACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAAACACAAAAGAAGCCAATGGTCATaGTCACCTCATTGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: TTMLYTFPANYSPLCKHKRSQWS*SPHWSE
Trigger: TTCACTCCAATGAGGTGATCATGACCATTGGCTTCT...TTTGTGTTTGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp ACAAATAATTCTAGAAATACAGCTTCCAAATTGCCCTCTAAAAGGCTGTACCAATTCGGGCAGCCTCTTTaGGGAAGGCCTCTACTGTTC +
Preference number: 4 (lower is better)
Translates to: TNNSRNTASKLPSKRLYQFGQPL*GRPLLF
Trigger: GAACAGTAGAGGCCTTCCTCAAAGAGGCTGCCCGAA...TTGGTACAGCCTTTTAGAGGGCAATTTGGAAGCTGTATTTCTAGAATTATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp GACATAACGGCAAAAATGGCAGCATCAGTCATGACAGTTGTCTCAATACCTGCTCACACTCTGCTACAATaGCATGGAATTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: DITAKMAASVMTVVSIPAHTLLQ*HGISSF
Trigger: GAAAGAGGAAATTCCATGTCATTGTAGCAGAGTGTG...AGCAGGTATTGAGACAACTGTCATGACTGATGCTGCCATTTTTGCCGTTATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR TCA 90 bp AAGATCGCTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACAGGCACTGTAAGAGCTaGCCAGAAAGAGAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: KIALKEISKNRDLSLRTYRHCKS*PERELL
Trigger: TAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCT...GTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAGCGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp TTATTGGTAGAGCCTAGAAAAAGTGTCATAGCCATTTCTGAGCAAAAATCTGTACTCCAGAGCCTGGGCTaGAATGTTCTCCATTGTCCC +
Preference number: 4 (lower is better)
Translates to: LLVEPRKSVIAISEQKSVLQSLG*NVLHCP
Trigger: GGGACAATGGAGAACATTGCAGCCCAGGCTCTGGAG...TACAGATTTTTGCTCAGAAATGGCTATGACACTTTTTCTAGGCTCTACCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp AGAAGGACAAATAGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTACAGTGTGTTTTGCTGCCAGTaGCAGAGTGTGAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RRTNRERLLNGYRVFFYSVFCCQ*QSVSSC
Trigger: ACAGGAACTCACACTCTGGCACTGGCAGCAAAACAC...ACTGTAGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCTATTTGTCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR GCA 90 bp ACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAAACACAAAAAAAGGCTCTGCTGCTaGTGTTTCAAGCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: TTMLYTFPANYSPLCKHKKRLCC*CFKQFC
Trigger: ACAGAACTGCTTGAAACAGCAGCAGCAGAGCCTTTT...TTTGTGTTTGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp ATTTGGAAATGTTGGCCCAGAGTTGCCAAATTTGAGTTTTCAAGAAAAGCAAGAACAAGTGGGAGCCACTaGATCTGGCCAGTACTACCA +
Preference number: 4 (lower is better)
Translates to: IWKCWPRVAKFEFSRKARTSGSH*IWPVLP
Trigger: TGGTAGTACTGGCCAGATGCAGTGGCTCCCACTTGT...TCTTGCTTTTCTTGAAAACTCAAATTTGGCAACTCTGGGCCAACATTTCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp AAGATCGCTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACTCATCCAGGCAGGAGTaGAGTGGTACAATGATAGCT +
Preference number: 4 (lower is better)
Translates to: KIALKEISKNRDLSLRTYSSRQE*SGTMIA
Trigger: AGCTATCATTGTACCACTGCACTCCTGCCTGGATGA...GTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAGCGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp AGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTACAGTGGAGAAAAAGTTTGCACAGACGATGAGTaGGGTGGAATGGTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: RERLLNGYRVFFYSGEKVCTDDE*GGMVFC
Trigger: GCAAAACACCATTCCACCCCACTCATCGTCTGTGCA...AACTTTTTCTCCACTGTAGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CCA 90 bp AAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCCAGTGTTAACCAAAATGTGCTTAGGACACGTGTaGTCGGTCATAAAACATGAT +
Preference number: 4 (lower is better)
Translates to: KNRDLSLRTYLCPVLTKMCLGHV*SVIKHD
Trigger: ATCATGTTTTATGACCGACCACACGTGTCCTAAGCA...CATTTTGGTTAACACTGGGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp TTGCAAGGATGTGCTTCAGCAGCAACACTCAAGTCTCCTCTTCATTCTGTATCTCTAACTACTGCCATTTaGAAATGTTGGCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LQGCASAATLKSPLHSVSLTTAI*KCWPRV
Trigger: AACTCTGGGCCAACATTTCCAAATGGCAGTAGTTAG...AGATACAGAATGAAGAGGAGACTTGAGTGTTGCTGCTGAAGCACATCCTTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTGGAGCCACAAACTTATaGAATGAGTCTTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: VLGTVRADQKESFYPYNLGATNL*NESSSL
Trigger: CAATGAAGAAGACTCATTTCATAAGTTTGTGGCTCC...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp TTAAATGGATCCAGTAGGAACTGCAGAAAACTGGAGATGTTCCATCCAATGGCAAACCCTGAGATCAGATaGAGTAGGACTGAGATGAAA +
Preference number: 4 (lower is better)
Translates to: LNGSSRNCRKLEMFHPMANPEIR*SRTEMK
Trigger: TTTCATCTCAGTCCTACTGCATCTGATCTCAGGGTT...TGCCATTGGATGGAACATCTCCAGTTTTCTGCAGTTCCTACTGGATCCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp ACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAAACACAAACCACAAACTAACTACTaGCATTTGGAAATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TTMLYTFPANYSPLCKHKPQTNY*HLEMLA
Trigger: GGCCAACATTTCCAAATGGCAGTAGTTAGTTTGTGG...TTTGTGTTTGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp AAGATCGCTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACGGATCCAGTAGGAACTaGAGAAAACTGGAGATGTTC +
Preference number: 4 (lower is better)
Translates to: KIALKEISKNRDLSLRTYGSSRN*RKLEMF
Trigger: GAACATCTCCAGTTTTCTGCAGTTCCTACTGGATCC...GTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAGCGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp ATTTGGAAATGTTGGCCCAGAGTTGCCAAATTTGAGTTTTCAAGAAAAGCAAGACATCCAACTCAGTCATaGCTGGGAAGGATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: IWKCWPRVAKFEFSRKARHPTQS*LGRMLV
Trigger: CACCAACATCCTTCCCAGGCATGACTGAGTTGGATG...TCTTGCTTTTCTTGAAAACTCAAATTTGGCAACTCTGGGCCAACATTTCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp ACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAAACACAAATCTGCTACAATGACATaGAATTTCCTCTTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: TTMLYTFPANYSPLCKHKSATMT*NFLFRA
Trigger: TGCCCGAAAGAGGAAATTCCATGTCATTGTAGCAGA...TTTGTGTTTGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp TTCAGGTTCTCTCTTTCTGATACTTACCCCTCCTCAAATAGGGAAACGGAGAGAATGAGTCTTCTTCATTaGGGAACTGTGGAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: FRFSLSDTYPSSNRETERMSLLH*GTVEKV
Trigger: AACTTTCTCCACAGTTCCCCAATGAAGAAGACTCAT...TCTCTCCGTTTCCCTATTTGAGGAGGGGTAAGTATCAGAAAGAGAGAACCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp AAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCCAGTGTTAACCAAAATGTATGGAACCTTCAAGTaGCTTTTATTGGTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: KNRDLSLRTYLCPVLTKMYGTFK*LLLVEP
Trigger: AGGCTCTACCAATAAAAGCCACTTGAAGGTTCCATA...CATTTTGGTTAACACTGGGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp ACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAAACACAAAGCCATTTGGAAATGTTaGCCCAGAGTTGCCAAATTT +
Preference number: 4 (lower is better)
Translates to: TTMLYTFPANYSPLCKHKAIWKC*PRVAKF
Trigger: AAATTTGGCAACTCTGGGCCAACATTTCCAAATGGC...TTTGTGTTTGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp TTAAATGGATCCAGTAGGAACTGCAGAAAACTGGAGATGTTCCATCCAATGGCATTCACTGAGAAAGCGTaGGGTCTTAGATGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: LNGSSRNCRKLEMFHPMAFTEKA*GLRCFK
Trigger: CTTAAAGCATCTAAGACCCCACGCTTTCTCAGTGAA...TGCCATTGGATGGAACATCTCCAGTTTTCTGCAGTTCCTACTGGATCCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp CATAAACATGTCAACAAAATTAGAGGATGTCCCTCTGCTTGCTGTGCTTGGTATGGTAGTGAGTTGATGTaGAACTTCTGTTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: HKHVNKIRGCPSACCAWYGSELM*NFCFLL
Trigger: CAGGAGGAAACAGAAGTTCCACATCAACTCACTACC...ATACCAAGCACAGCAAGCAGAGGGACATCCTCTAATTTTGTTGACATGTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp GGAGAAGGACAAATAGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTACAAAAGGACAGGCCCTGTaGAGAAAGTTTGAACATAGG +
Preference number: 4 (lower is better)
Translates to: GEGQIGRDYLMGTGCFSTKGQAL*RKFEHR
Trigger: CCTATGTTCAAACTTTCTCCACAGGGCCTGTCCTTT...TGTAGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCTATTTGTCCTTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR TCA 90 bp CAAATAGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTACAGTGGAGAAACACCTTGTTGACTCTTaGCATAACGGCAAAAATGGC +
Preference number: 4 (lower is better)
Translates to: QIGRDYLMGTGCFSTVEKHLVDS*HNGKNG
Trigger: GCCATTTTTGCCGTTATGTCAAGAGTCAACAAGGTG...TTTCTCCACTGTAGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR TCA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTCACAAACTTATGAAATaGGTCTTCTTCATTGGGGAA +
Preference number: 4 (lower is better)
Translates to: VLGTVRADQKESFYPYNLHKLMK*VFFIGE
Trigger: TTCCCCAATGAAGAAGACTCATTTCATAAGTTTGTG...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp AGAGAGTGGTGGTTGTACAATGCTGTGAATGTACTAGATATCACTAAATTGTATGGAATGGTGTTTTGCTaGCAGTGCCAGAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: REWWLYNAVNVLDITKLYGMVFC*QCQSVS
Trigger: ACTCACACTCTGGCACTGGCAGCAAAACACCATTCC...ATACAATTTAGTGATATCTAGTACATTCACAGCATTGTACAACCACCACTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CCA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTGAGACTATCCTTTTCTaGGAAGCTTTAAACAGATTC +
Preference number: 4 (lower is better)
Translates to: VLGTVRADQKESFYPYNLETILF*EALNRF
Trigger: GAATCTGTTTAAAGCTTCCCAGAAAAGGATAGTCTC...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGGTGTTAACCAAAATGTaGTTTCAAATCACCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLVLTKM*FQITCS
Trigger: TGAACAGGTGATTTGAAACCACATTTTGGTTAACAC...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR TCA 90 bp TTATTGGTAGAGCCTAGAAAAAGTGTCATAGCCATTTCTGAGCAAAAATCTGTAGAAAGTTTAAGTTCCTaGCACAGACGCAACCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLVEPRKSVIAISEQKSVESLSS*HRRNQV
Trigger: GACCTGGTTGCGTCTGTGTCAGGAACTTAAACTTTC...TACAGATTTTTGCTCAGAAATGGCTATGACACTTTTTCTAGGCTCTACCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp ACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAAACACAAACAAATTCACATTAAATaGAGTGAACCAGCCCAAATG +
Preference number: 4 (lower is better)
Translates to: TTMLYTFPANYSPLCKHKQIHIK*SEPAQM
Trigger: CATTTGGGCTGGTTCACTGCATTTAATGTGAATTTG...TTTGTGTTTGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp CCAGTGTTAACCAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTCAAATGGACTTCCTTaGAAATCTGTCCCATTCTTT +
Preference number: 4 (lower is better)
Translates to: PVLTKMWFQITCSKPTGYSNGLP*KSVPFF
Trigger: AAAGAATGGGACAGATTTGCAAGGAAGTCCATTTGA...ATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTGGTTAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp AAGATCGCTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACTCCCTCTGCTTGCTGTaGTTGGTATTATACTTCTAT +
Preference number: 4 (lower is better)
Translates to: KIALKEISKNRDLSLRTYSLCLL*LVLYFY
Trigger: ATAGAAGTATAATACCAAGCACAGCAAGCAGAGGGA...GTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAGCGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp GAGTGGTGGTTGTACAATGCTGTGAATGTACTAGATATCACTAAATTGTATACTAAGTTTGAACATAGGTaGACAGACGATGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: EWWLYNAVNVLDITKLYTKFEHR*TDDEWG
Trigger: ACCCCACTCATCGTCTGTGCACCTATGTTCAAACTT...AGTATACAATTTAGTGATATCTAGTACATTCACAGCATTGTACAACCACCACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CCA 90 bp AAGATCGCTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACACACAGAGACTAAGATaGACAAAGGACAAGTATCAT +
Preference number: 4 (lower is better)
Translates to: KIALKEISKNRDLSLRTYTQRLR*TKDKYH
Trigger: ATGATACTTGTCCTTTGTCCATCTTAGTCTCTGTGT...GTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAGCGATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp CAAATAGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTACAGTGGAGAAAGAAACTAGAGAGTGGTaGTTGTACAATGCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: QIGRDYLMGTGCFSTVEKETREW*LYNAVN
Trigger: ATTCACAGCATTGTACAACCACCACTCTCTAGTTTC...TTTCTCCACTGTAGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR TCA 90 bp TTATTGGTAGAGCCTAGAAAAAGTGTCATAGCCATTTCTGAGCAAAAATCTGTACACACTCTGCTACAATaGCATGGAATTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LLVEPRKSVIAISEQKSVHTLLQ*HGISSF
Trigger: GAAAGAGGAAATTCCATGTCATTGTAGCAGAGTGTG...TACAGATTTTTGCTCAGAAATGGCTATGACACTTTTTCTAGGCTCTACCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR GCA 90 bp TTATTGGTAGAGCCTAGAAAAAGTGTCATAGCCATTTCTGAGCAAAAATCTGTAAATGAGTCCGTATTATaGATATTGCTCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LLVEPRKSVIAISEQKSVNESVL*ILLCSL
Trigger: CAAGCTGCAGAGCAATATGCATAATACGGACTCATT...TACAGATTTTTGCTCAGAAATGGCTATGACACTTTTTCTAGGCTCTACCAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CCA 90 bp ACAAATAATTCTAGAAATACAGCTTCCAAATTGCCCTCTAAAAGGCTGTACCAATTCATTGGGGAACTGTaGAGAAAGTTTGAACATAGG +
Preference number: 4 (lower is better)
Translates to: TNNSRNTASKLPSKRLYQFIGEL*RKFEHR
Trigger: CCTATGTTCAAACTTTCTCCACAGTTCCCCAATGAA...TTGGTACAGCCTTTTAGAGGGCAATTTGGAAGCTGTATTTCTAGAATTATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
3UTR CAA 72 bp CAGTGGAGAAAAAGTTTTGAAACTAGAGAGTGGTGGTaGTACAATGCTGTGAATGTACTAGATATCACTAAA +
Preference number: 4 (lower is better)
Translates to: QWRKSFETREWW*YNAVNVLDITK
Trigger: TTTAGTGATATCTAGTACATTCACAGCATTGTACAACCACCACTCTCTAGTTTCAAAACTTTTTCTCCACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR GCA 90 bp GAGTGGTGGTTGTACAATGCTGTGAATGTACTAGATATCACTAAATTGTATACTTCTTCACTTAGTCCTTaGTTGTATTCAGGTTACAAA +
Preference number: 4 (lower is better)
Translates to: EWWLYNAVNVLDITKLYTSSLSP*LYSGYK
Trigger: TTTGTAACCTGAATACAAGCAAGGACTAAGTGAAGA...AGTATACAATTTAGTGATATCTAGTACATTCACAGCATTGTACAACCACCACTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS CCA 90 bp TTCGCCGGCGGAGGCAGGCCGGCCTCACCCGCGTTGCTCCAGCGGTaGTCCGTGATGATCTGGCGCAGCAACCCTAGGGTCTCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: FAGGGRPASPALLQR*SVMIWRSNPRVSRA
Trigger: GGCTCGGGAGACCCTAGGGTTGCTGCGCCAGATCATCACGGACCACCGCTGGAGCAACGCGGGTGAGGCCGGCCTGCCTCCGCCGGCGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS GCA 90 bp TGTTGCCCACGGTGGTCTCGGAGGGCTGAGCGGCCGTCATCCTCCTaGCCTCTCTGCGGATCAGCTCCATCAGCTCCCCCGCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: CCPRWSRRAERPSSS*PLCGSAPSAPPRCS
Trigger: GGAGCAACGCGGGGGAGCTGATGGAGCTGATCCGCAGAGAGGGCAGGAGGATGACGGCCGCTCAGCCCTCCGAGACCACCGTGGGCAACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000555522.1
ENST00000556028.5
CDS GCA 90 bp TCTGGCGCAGCAACCCTAGGGTCTCCCGAGCCATTTCCTCGGAGCTaGGCGGCCCACCACCCCGCTTCAGGGTCTCCACGAAGCTCTCGA +
Preference number: 5 (lower is better)
Translates to: SGAATLGSPEPFPRS*AAHHPASGSPRSSR
Trigger: TCGAGAGCTTCGTGGAGACCCTGAAGCGGGGTGGTGGGCCGCGCAGCTCCGAGGAAATGGCTCGGGAGACCCTAGGGTTGCTGCGCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000553539.1
ENST00000555522.1
ENST00000556028.5
CDS CCA 90 bp AGGCCGGCCTCACCCGCGTTGCTCCAGCGGTGGTCCGTGATGATCTaGCGCAGCAACCCTAGGGTCTCCCGAGCCATTTCCTCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RPASPALLQRWSVMI*RSNPRVSRAISSEL
Trigger: CAGCTCCGAGGAAATGGCTCGGGAGACCCTAGGGTTGCTGCGCCAGATCATCACGGACCACCGCTGGAGCAACGCGGGTGAGGCCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS TCA 90 bp TTGAGCACTCTCCGCACCATGTTGCCCACGGTGGTCTCGGAGGGCTaGGCGGCCGTCATCCTCCTGCCCTCTCTGCGGATCAGCTCCATC +
Preference number: 5 (lower is better)
Translates to: LSTLRTMLPTVVSEG*AAVILLPSLRISSI
Trigger: GATGGAGCTGATCCGCAGAGAGGGCAGGAGGATGACGGCCGCTCAGCCCTCCGAGACCACCGTGGGCAACATGGTGCGGAGAGTGCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000553539.1
ENST00000555522.1
ENST00000556028.5
CDS CCA 90 bp TCCATCAGCTCCCCCGCGTTGCTCCAGCGGTGGTCCGTGATGATCTaGCGCAGCAACCCTAGGGTCTCCCGAGCCATTTCCTCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SISSPALLQRWSVMI*RSNPRVSRAISSEL
Trigger: CAGCTCCGAGGAAATGGCTCGGGAGACCCTAGGGTTGCTGCGCCAGATCATCACGGACCACCGCTGGAGCAACGCGGGGGAGCTGATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000555522.1
ENST00000556028.5
CDS GCA 90 bp CGGTGGTCTCGGAGGGCTGAGCGGCCGTCATCCTCCTGCCCTCTCTaGGGATCAGCTCCATCAGCTCCCCTACAGTCCAAAAGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: RWSRRAERPSSSCPL*GSAPSAPLQSKRER
Trigger: CCTCTCTCTTTTGGACTGTAGGGGAGCTGATGGAGCTGATCCGCAGAGAGGGCAGGAGGATGACGGCCGCTCAGCCCTCCGAGACCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS GCA 90 bp TGTTGCCCACGGTGGTCTCGGAGGGCTGAGCGGCCGTCATCCTCCTaGCCTCTCTGCGGATCAGCTCCATCAGCTCCCCTACAGTCCAAA +
Preference number: 5 (lower is better)
Translates to: CCPRWSRRAERPSSS*PLCGSAPSAPLQSK
Trigger: TTTGGACTGTAGGGGAGCTGATGGAGCTGATCCGCAGAGAGGGCAGGAGGATGACGGCCGCTCAGCCCTCCGAGACCACCGTGGGCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS-3UTR CAA 90 bp CCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGAGCTCTCAGGGCCCCATaGGCCAGGATGGTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: PVPECEFLSQLSGPHWPGALRAP*ARMVFV
Trigger: CACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGC...TCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTCACACTCTGGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp AGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTATCAGCTCCCCCGCGTaGCTCCAGCGGTGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: RCTDDEWGGMVFCCQCQSISSPA*LQRWSV
Trigger: CACGGACCACCGCTGGAGCAACGCGGGGGAGCTGAT...ACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp GAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACATCAGCTCCCCCGCGTaGCTCCAGCGGTGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: EWGGMVFCCQCQSVSSCHISSPA*LQRWSV
Trigger: CACGGACCACCGCTGGAGCAACGCGGGGGAGCTGAT...GTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS TCA 90 bp TCGTTTAGGCCTCCGGATGTCAACAGTTTGTGCAGGGACTCCTGCTaGTCACTCTCGTCGCTGCGTCCATGGAGTCTGCCATACTCCTCC +
Preference number: 5 (lower is better)
Translates to: SFRPPDVNSLCRDSC*SLSSLRPWSLPYSS
Trigger: GGAGGAGTATGGCAGACTCCATGGACGCAGCGACGAGAGTGATCAGCAGGAGTCCCTGCACAAACTGTTGACATCCGGAGGCCTAAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000555522.1
ENST00000556028.5
CDS-3UTR CAA 90 bp CCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGACTGCAATGTTCTCCATaGTCCCTTCCAGCTCCACTA +
Preference number: 5 (lower is better)
Translates to: PVPECEFLSQLSGPHWPGLQCSP*SLPAPL
Trigger: TAGTGGAGCTGGAAGGGACAATGGAGAACATTGCAG...TCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTCACACTCTGGCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp TTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTTCCTCCCGGATAATCTaGAGCACTCTCCGCACCATG +
Preference number: 5 (lower is better)
Translates to: FCCQCQSVSSCHSSQGPISSRII*STLRTM
Trigger: CATGGTGCGGAGAGTGCTCAAGATTATCCGGGAGGA...AATGGGGCCCTGAGAGCTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp TTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGGCTCTCAGGGCCCCATaGGCCAGGATGGTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: FEHRCTDDEWGGMVFCCQALRAP*ARMVFV
Trigger: CACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGC...CTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp CATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGGGGTGGAATGGTGTTTaGCTGCCAGTGCCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: HRCTDDEWGGMVFCCQCQGWNGV*LPVPEC
Trigger: ACACTCTGGCACTGGCAGCAAAACACCATTCCACCC...CTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp AAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCCAGTGTTAACCAAAATGATCAGCTCCCCCGCGTaGCTCCAGCGGTGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: KNRDLSLRTYLCPVLTKMISSPA*LQRWSV
Trigger: CACGGACCACCGCTGGAGCAACGCGGGGGAGCTGAT...CATTTTGGTTAACACTGGGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp CCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAATGATCGATGTTGGACTGGAGTaGGGCATAATGGAAGCTGAA +
Preference number: 5 (lower is better)
Translates to: PVTALRAPLARMVFVPMIDVGLE*GIMEAE
Trigger: TTCAGCTTCCATTATGCCCAACTCCAGTCCAACATC...GATCATTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS CCA 90 bp CAGGCCCTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTaGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: QALWRKFEHRCTDDE*GGMVFCCQCQSVSS
Trigger: GGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CAA 90 bp CCAGAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTCCAATGATCACCTTGTaGACTCTTGACATAACGGCA +
Preference number: 5 (lower is better)
Translates to: PECEFLSQLSGPHWPGWSPMITL*TLDITA
Trigger: TGCCGTTATGTCAAGAGTCAACAAGGTGATCATTGG...AGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTCACACTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp GAGTGTGAGTTCCTGTCACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGGTGCCAATGATCACCTaGTTGACTCTTGACATAACG +
Preference number: 5 (lower is better)
Translates to: ECEFLSQLSGPHWPGWSSVPMIT*LTLDIT
Trigger: CGTTATGTCAAGAGTCAACAAGGTGATCATTGGCAC...CGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGTGACAGGAACTCACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGGCTCTCAGGGCCCCATaGGCCAGGATGGTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLALRAP*ARMVFV
Trigger: CACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGC...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp GGGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAGGGTGGAATGGTGTTTaGCTGCCAGTGCCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: GELWRKFEHRCTDDEWGGGWNGV*LPVPEC
Trigger: ACACTCTGGCACTGGCAGCAAAACACCATTCCACCC...TCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS GCA 90 bp ATGTCAACAGTTTGTGCAGGGACTCCTGCTGATCACTCTCGTCGCTaGGTCCATGGAGTCTATAGAGGCAACAAGACCCAAAGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: MSTVCAGTPADHSRR*VHGVYRGNKTQRER
Trigger: CCTCTCTCTTTGGGTCTTGTTGCCTCTATAGACTCCATGGACGCAGCGACGAGAGTGATCAGCAGGAGTCCCTGCACAAACTGTTGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS-3UTR CAA 90 bp GTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAGTGTGAGTTCCTGTCACAGGATGTTGGACTGGAGTaGGGCATAATGGAAGCTGAA +
Preference number: 5 (lower is better)
Translates to: VGWNGVLLPVPECEFLSQDVGLE*GIMEAE
Trigger: TTCAGCTTCCATTATGCCCAACTCCAGTCCAACATC...CTGTGACAGGAACTCACACTCTGGCACTGGCAGCAAAACACCATTCCACCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp ACAGCTCTCAGGGCCCCATTGGCCAGGATGGTCTTCGTGCCAATGATCACCTTGGTGCCAATGATCACCTaGTTGACTCTTGACATAACG +
Preference number: 5 (lower is better)
Translates to: TALRAPLARMVFVPMITLVPMIT*LTLDIT
Trigger: CGTTATGTCAAGAGTCAACAAGGTGATCATTGGCAC...CAAGGTGATCATTGGCACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS TCA 90 bp TCTACTGTTCGGGAGAAGCCAATGGTCATGATCACCTCATTGGAGTaGATGTGCTCCAGAGCCTGGGCTGCAATGTTCTCCATTGTCCCT +
Preference number: 5 (lower is better)
Translates to: STVREKPMVMITSLE*MCSRAWAAMFSIVP
Trigger: AGGGACAATGGAGAACATTGCAGCCCAGGCTCTGGAGCACATTCACTCCAATGAGGTGATCATGACCATTGGCTTCTCCCGAACAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000553539.1
ENST00000555522.1
ENST00000556028.5
CDS GCA 90 bp TCAGGTTACAAAGGACAGGCCCTGTGGAGAAAGTTTGAACATAGGTaGACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: SGYKGQALWRKFEHR*TDDEWGGMVFCCQC
Trigger: GCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGGGCCTGTCCTTTGTAACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CAA 90 bp TGGGGAGAAGGACAAATAGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTGCTCTCAGGGCCCCATaGGCCAGGATGGTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: WGEGQIGRDYLMGTGCFSALRAP*ARMVFV
Trigger: CACGAAGACCATCCTGGCCAATGGGGCCCTGAGAGC...AGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCTATTTGTCCTTCTCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CAA 90 bp AAATGCAGTGAACCAGCCCAAATGCCTTCAATCCAGACACTGCCCCTCCAGCCAGCCAGTACTACCATGTaGTACACTTTTCCCGCTAAC +
Preference number: 5 (lower is better)
Translates to: KCSEPAQMPSIQTLPLQPASTTM*YTFPAN
Trigger: GTTAGCGGGAAAAGTGTACAACATGGTAGTACTGGC...TGGCTGGAGGGGCAGTGTCTGGATTGAAGGCATTTGGGCTGGTTCACTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp AAATGCAGTGAACCAGCCCAAATGCCTTCAATCCAGACACTGCCCCTCCAGCCAGACTATGAACAAACTTaGGGGCCAGGAGCAGTGAAT +
Preference number: 5 (lower is better)
Translates to: KCSEPAQMPSIQTLPLQPDYEQT*GPGAVN
Trigger: ATTCACTGCTCCTGGCCCCAAAGTTTGTTCATAGTC...TGGCTGGAGGGGCAGTGTCTGGATTGAAGGCATTTGGGCTGGTTCACTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS CCA 90 bp AGTCTCCTTACCTGGCAGAAAGGAGCACACTCTGCTACAATGACATaGAATTTCCTCTTTCGGGCAGCCTCTTTGAGGAAGGCCTCTACT +
Preference number: 5 (lower is better)
Translates to: SLLTWQKGAHSATMT*NFLFRAASLRKAST
Trigger: AGTAGAGGCCTTCCTCAAAGAGGCTGCCCGAAAGAGGAAATTCCATGTCATTGTAGCAGAGTGTGCTCCTTTCTGCCAGGTAAGGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553539.1
ENST00000555522.1
CDS CCA 90 bp CTCAATACCTGCTGGCAGAAAGGAGCACACTCTGCTACAATGACATaGAATTTCCTCTTTCGGGCAGCCTCTTTGAGGAAGGCCTCTACT +
Preference number: 5 (lower is better)
Translates to: LNTCWQKGAHSATMT*NFLFRAASLRKAST
Trigger: AGTAGAGGCCTTCCTCAAAGAGGCTGCCCGAAAGAGGAAATTCCATGTCATTGTAGCAGAGTGTGCTCCTTTCTGCCAGCAGGTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556028.5
CDS-3UTR CAA 90 bp ATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAGTGCCAGAAACTGTGGAGAAAGTTaGAACATAGGTGCACAGACG +
Preference number: 5 (lower is better)
Translates to: IGAQTMSGVEWCFAASARNCGES*NIGAQT
Trigger: CGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTT...TCTGGCACTGGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp AAATGCAGTGAACCAGCCCAAATGCCTTCAATCCAGACACTGCCCCTCCAGCCATGCCATTTGGAAATGTaGGCCCAGAGTTGCCAAATT +
Preference number: 5 (lower is better)
Translates to: KCSEPAQMPSIQTLPLQPCHLEM*AQSCQI
Trigger: AATTTGGCAACTCTGGGCCAACATTTCCAAATGGCA...TGGCTGGAGGGGCAGTGTCTGGATTGAAGGCATTTGGGCTGGTTCACTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp AGATTGGAGGAGATGGGGAGAAGGACAAATAGGGAGAGATTACTTAATGGGTACGGGTGGAATGGTGTTTaGCTGCCAGTGCCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: RLEEMGRRTNRERLLNGYGWNGV*LPVPEC
Trigger: ACACTCTGGCACTGGCAGCAAAACACCATTCCACCC...GTACCCATTAAGTAATCTCTCCCTATTTGTCCTTCTCCCCATCTCCTCCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CAA 90 bp AAATGCAGTGAACCAGCCCAAATGCCTTCAATCCAGACACTGCCCCTCCAGCCAAATACAGCTTCCAAATaGCCCTCTAAAAGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: KCSEPAQMPSIQTLPLQPNTASK*PSKRLY
Trigger: GTACAGCCTTTTAGAGGGCAATTTGGAAGCTGTATT...TGGCTGGAGGGGCAGTGTCTGGATTGAAGGCATTTGGGCTGGTTCACTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS GCA 90 bp ATCAGGATGGTAGAGTTCACTCATCAGGCGGTAGATGTAGGAAGGTaGATTCCCACCAATGTTGGAGATAAAGAGGGTAATGAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: IRMVEFTHQAVDVGR*IPTNVGDKEGNELW
Trigger: CCAGAGCTCATTACCCTCTTTATCTCCAACATTGGTGGGAATGCACCTTCCTACATCTACCGCCTGATGAGTGAACTCTACCATCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266126.10
ENST00000556668.1
CDS-3UTR CAA 90 bp TGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTCTGCAATGTTCTCCATaGTCCCTTCCAGCTCCACTA +
Preference number: 5 (lower is better)
Translates to: WRKFEHRCTDDEWGGMVFLQCSP*SLPAPL
Trigger: TAGTGGAGCTGGAAGGGACAATGGAGAACATTGCAG...AAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTTTTCGGGCAGCCTCTTaGAGGAAGGCCTCTACTGTT +
Preference number: 5 (lower is better)
Translates to: VLGTVRADQKESFYPYNLFRAAS*RKASTV
Trigger: AACAGTAGAGGCCTTCCTCAAAGAGGCTGCCCGAAA...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp TTCTTCATTGGGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTTTCGGGCAGCCTCTTaGAGGAAGGCCTCTACTGTT +
Preference number: 5 (lower is better)
Translates to: FFIGELWRKFEHRCTDDEFRAAS*RKASTV
Trigger: AACAGTAGAGGCCTTCCTCAAAGAGGCTGCCCGAAA...CTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCCCAATGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR CAA 90 bp GTCTTCGTGCCAATGATCACCTTGTTGACTCTTGACATAACGGCAAAAATGGCATTTCGGGCAGCCTCTTaGAGGAAGGCCTCTACTGTT +
Preference number: 5 (lower is better)
Translates to: VFVPMITLLTLDITAKMAFRAAS*RKASTV
Trigger: AACAGTAGAGGCCTTCCTCAAAGAGGCTGCCCGAAA...TGCCATTTTTGCCGTTATGTCAAGAGTCAACAAGGTGATCATTGGCACGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp TTAAATGGATCCAGTAGGAACTGCAGAAAACTGGAGATGTTCCATCCAATGGCAGGGTGGAATGGTGTTTaGCTGCCAGTGCCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: LNGSSRNCRKLEMFHPMAGWNGV*LPVPEC
Trigger: ACACTCTGGCACTGGCAGCAAAACACCATTCCACCC...TGCCATTGGATGGAACATCTCCAGTTTTCTGCAGTTCCTACTGGATCCATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp AGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGTGTTTTGCTGCCAACTGTGGAGAAAGTTaGAACATAGGTGCACAGACG +
Preference number: 5 (lower is better)
Translates to: SLNIGAQTMSGVEWCFAANCGES*NIGAQT
Trigger: CGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTT...GGCAGCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553401.5
ENST00000556028.5
CDS-3UTR CAA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGGATGTTGGACTGGAGTaGGGCATAATGGAAGCTGAA +
Preference number: 5 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLDVGLE*GIMEAE
Trigger: TTCAGCTTCCATTATGCCCAACTCCAGTCCAACATC...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS GCA 90 bp AACGGCAAAAATGGCAGCATCAGTCATGACAGTTGTCTCAATACCTaGTTTGGACAAATTCACAGCCATTTCATGACCCTGGCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: NGKNGSISHDSCLNT*FGQIHSHFMTLAER
Trigger: CCTTTCTGCCAGGGTCATGAAATGGCTGTGAATTTGTCCAAAGCAGGTATTGAGACAACTGTCATGACTGATGCTGCCATTTTTGCCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS GCA 90 bp AACGGCAAAAATGGCAGCATCAGTCATGACAGTTGTCTCAATACCTaGTTTGGACAAATTCACAGCCATTTCATGACCCTGCAATGGGAG +
Preference number: 5 (lower is better)
Translates to: NGKNGSISHDSCLNT*FGQIHSHFMTLQWE
Trigger: CTCCCATTGCAGGGTCATGAAATGGCTGTGAATTTGTCCAAAGCAGGTATTGAGACAACTGTCATGACTGATGCTGCCATTTTTGCCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR CAA 90 bp CCAGTGTTAACCAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATCTGCAATGTTCTCCATaGTCCCTTCCAGCTCCACTA +
Preference number: 5 (lower is better)
Translates to: PVLTKMWFQITCSKPTGYLQCSP*SLPAPL
Trigger: TAGTGGAGCTGGAAGGGACAATGGAGAACATTGCAG...ATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTGGTTAACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp AACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATGAGTGGGGTGGAATGGAATGAGTCTTCTTCATaGGGGAACTGTGGAGAAAGT +
Preference number: 5 (lower is better)
Translates to: NCGESLNIGAQTMSGVEWNESSS*GNCGES
Trigger: ACTTTCTCCACAGTTCCCCAATGAAGAAGACTCATT...CCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR CAA 90 bp CATAAACATGTCAACAAAATTAGAGGATGTCCCTCTGCTTGCTGTGCTTGGTATCTGTGCACTCCCACATaGCAAGGATGTGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: HKHVNKIRGCPSACCAWYLCTPT*QGCASA
Trigger: TGCTGAAGCACATCCTTGCAATGTGGGAGTGCACAG...ATACCAAGCACAGCAAGCAGAGGGACATCCTCTAATTTTGTTGACATGTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp AGCTTCTACCCTTATAACCTTCATCCAACTCAGTCATGCCTGGGAAGGATGTTGGAATTGCTGTTAGAATaGGTGCCTTTGGAGGAGACA +
Preference number: 5 (lower is better)
Translates to: SFYPYNLHPTQSCLGRMLELLLE*VPLEET
Trigger: TGTCTCCTCCAAAGGCACCAATTCTAACAGCAATTC...CAACATCCTTCCCAGGCATGACTGAGTTGGATGAAGGTTATAAGGGTAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS TCA 90 bp TCCCCTTCTGTGAATGGCAGGACTTCTTCAGGAGCCACAAACTTATaGAATGAGTCTTCTTCATTGGGGAACTGTGGAGAAAGTTTGAAC +
Preference number: 5 (lower is better)
Translates to: SPSVNGRTSSGATNL*NESSSLGNCGESLN
Trigger: GTTCAAACTTTCTCCACAGTTCCCCAATGAAGAAGACTCATTTCATAAGTTTGTGGCTCCTGAAGAAGTCCTGCCATTCACAGAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266126.10
ENST00000556668.1
CDS-3UTR CAA 90 bp CAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTTGTTAAACATTCCTCCCGGATAATCTaGAGCACTCTCCGCACCATG +
Preference number: 5 (lower is better)
Translates to: QNVVSNHLFKAHRLFVKHSSRII*STLRTM
Trigger: CATGGTGCGGAGAGTGCTCAAGATTATCCGGGAGGA...ATGTTTAACAAATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp CTCTCAAAGAGATATCAAAGAATAGAGACCTTTCCCTCAGAACCTACCTCTGCCCCAATGATCACCTTGTaGACTCTTGACATAACGGCA +
Preference number: 5 (lower is better)
Translates to: LSKRYQRIETFPSEPTSAPMITL*TLDITA
Trigger: TGCCGTTATGTCAAGAGTCAACAAGGTGATCATTGG...GGCAGAGGTAGGTTCTGAGGGAAAGGTCTCTATTCTTTGATATCTCTTTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp GTCTTCTTCATTGGGGAACTGTGGAGAAAGTTTGAACATAGGTGCACAGACGATCCAATGATCACCTTGTaGACTCTTGACATAACGGCA +
Preference number: 5 (lower is better)
Translates to: VFFIGELWRKFEHRCTDDPMITL*TLDITA
Trigger: TGCCGTTATGTCAAGAGTCAACAAGGTGATCATTGG...ATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTTCCCCAATGAAGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553401.5
CDS-3UTR CAA 90 bp TTGCAAGGATGTGCTTCAGCAGCAACACTCAAGTCTCCTCTTCATTCTGTATCTGCATTCCCACCAATGTaGGAGATAAAGAGGGTAATG +
Preference number: 5 (lower is better)
Translates to: LQGCASAATLKSPLHSVSAFPPM*EIKRVM
Trigger: CATTACCCTCTTTATCTCCAACATTGGTGGGAATGC...AGATACAGAATGAAGAGGAGACTTGAGTGTTGCTGCTGAAGCACATCCTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp TTGCAAGGATGTGCTTCAGCAGCAACACTCAAGTCTCCTCTTCATTCTGTATCTCCTCCAGCCATCCTTTaGAAACTTCTATTGCCATGT +
Preference number: 5 (lower is better)
Translates to: LQGCASAATLKSPLHSVSPPAIL*KLLLPC
Trigger: ACATGGCAATAGAAGTTTCAAAAGGATGGCTGGAGG...AGATACAGAATGAAGAGGAGACTTGAGTGTTGCTGCTGAAGCACATCCTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp TGGCCAGTACTACCATGTTGTACACTTTTCCCGCTAACTACAGCCCTCTATGCAATCAAATGGACTTCCTaGCAAATCTGTCCCATTCTT +
Preference number: 5 (lower is better)
Translates to: WPVLPCCTLFPLTTALYAIKWTS*QICPIL
Trigger: AAGAATGGGACAGATTTGCAAGGAAGTCCATTTGAT...TGCATAGAGGGCTGTAGTTAGCGGGAAAAGTGTACAACATGGTAGTACTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp GTTCTAGGCACTGTAAGAGCTGACCAGAAAGAGAGCTTCTACCCTTATAACCTTACAGATTTAAGTTCCTaGCCTCACTGCTGCTCTTAC +
Preference number: 5 (lower is better)
Translates to: VLGTVRADQKESFYPYNLTDLSS*PHCCSY
Trigger: GTAAGAGCAGCAGTGAGGCAAGGAACTTAAATCTGT...AAGGTTATAAGGGTAGAAGCTCTCTTTCTGGTCAGCTCTTACAGTGCCTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp CTTTTCTGGGAAGCTTTAAACAGATTCCCAGGTAGTAACCCTGAGATCAGATGCAATGAGTCTTCTTCATaGGGGAACTGTGGAGAAAGT +
Preference number: 5 (lower is better)
Translates to: LFWEALNRFPGSNPEIRCNESSS*GNCGES
Trigger: ACTTTCTCCACAGTTCCCCAATGAAGAAGACTCATT...GCATCTGATCTCAGGGTTACTACCTGGGAATCTGTTTAAAGCTTCCCAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp CCAGTGTTAACCAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTTTAGTTTCGCCATTTaGACCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PVLTKMWFQITCSKPTGYFSFAI*TRLVSN
Trigger: GTTTGAGACCAGCCTGGTCAAAATGGCGAAACTAAA...ATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTGGTTAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp ACAAATAATTCTAGAAATACAGCTTCCAAATTGCCCTCTAAAAGGCTGTACCAAGAGTCTCACCCACTGTaGCCCAGGCTAAAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: TNNSRNTASKLPSKRLYQESHPL*PRLKCS
Trigger: ACTGCACTTTAGCCTGGGCAACAGTGGGTGAGACTC...TTGGTACAGCCTTTTAGAGGGCAATTTGGAAGCTGTATTTCTAGAATTATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp CCAGTGTTAACCAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTTAGAATTGGTGCCTTaGGAGGAGACAATTGCTCGT +
Preference number: 5 (lower is better)
Translates to: PVLTKMWFQITCSKPTGYLELVP*EETIAR
Trigger: ACGAGCAATTGTCTCCTCCAAAGGCACCAATTCTAA...ATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTGGTTAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp AGAAGGACAAATAGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTACAGTCCCTGTGGAGAAAGTTaGAACATAGGTGCACAGACG +
Preference number: 5 (lower is better)
Translates to: RRTNRERLLNGYRVFFYSPCGES*NIGAQT
Trigger: CGTCTGTGCACCTATGTTCAAACTTTCTCCACAGGG...ACTGTAGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCTATTTGTCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CAA 90 bp CATAAACATGTCAACAAAATTAGAGGATGTCCCTCTGCTTGCTGTGCTTGGTATAACTGTGGAGAAAGTTaGAACATAGGTGCACAGACG +
Preference number: 5 (lower is better)
Translates to: HKHVNKIRGCPSACCAWYNCGES*NIGAQT
Trigger: CGTCTGTGCACCTATGTTCAAACTTTCTCCACAGTT...ATACCAAGCACAGCAAGCAGAGGGACATCCTCTAATTTTGTTGACATGTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp CAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTTGTTAAACATAGGATGTCCCTCTGCTaGCTGTGCTTGGTATTATAC +
Preference number: 5 (lower is better)
Translates to: QNVVSNHLFKAHRLFVKHRMSLC*LCLVLY
Trigger: GTATAATACCAAGCACAGCAAGCAGAGGGACATCCT...ATGTTTAACAAATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp CATAAACATGTCAACAAAATTAGAGGATGTCCCTCTGCTTGCTGTGCTTGGTATTTGTACCCAAGTGAATaGCTGTTAGAATTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: HKHVNKIRGCPSACCAWYLYPSE*LLELVP
Trigger: AGGCACCAATTCTAACAGCAATTCACTTGGGTACAA...ATACCAAGCACAGCAAGCAGAGGGACATCCTCTAATTTTGTTGACATGTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp ATTTGGAAATGTTGGCCCAGAGTTGCCAAATTTGAGTTTTCAAGAAAAGCAAGAGTGCCAATGATCACCTaGTTGACTCTTGACATAACG +
Preference number: 5 (lower is better)
Translates to: IWKCWPRVAKFEFSRKARVPMIT*LTLDIT
Trigger: CGTTATGTCAAGAGTCAACAAGGTGATCATTGGCAC...TCTTGCTTTTCTTGAAAACTCAAATTTGGCAACTCTGGGCCAACATTTCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS CCA 90 bp CTTGATCTTCTCAGTGTCTCAAAGTCTTGCTTATCAATTCAAGGTTaGAATGGCCCTACCCATCTCTCGTTTATTTCTTCTTCATTTTTC +
Preference number: 5 (lower is better)
Translates to: LDLLSVSKSCLSIQG*NGPTHLSFISSSFF
Trigger: GAAAAATGAAGAAGAAATAAACGAGAGATGGGTAGGGCCATTCCAACCTTGAATTGATAAGCAAGACTTTGAGACACTGAGAAGATCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS-3UTR CAA 90 bp AGAGAGTGGTGGTTGTACAATGCTGTGAATGTACTAGATATCACTAAATTGTATCCAATGATCACCTTGTaGACTCTTGACATAACGGCA +
Preference number: 5 (lower is better)
Translates to: REWWLYNAVNVLDITKLYPMITL*TLDITA
Trigger: TGCCGTTATGTCAAGAGTCAACAAGGTGATCATTGG...ATACAATTTAGTGATATCTAGTACATTCACAGCATTGTACAACCACCACTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CAA 90 bp GAGTGGTGGTTGTACAATGCTGTGAATGTACTAGATATCACTAAATTGTATACTGTGCCAATGATCACCTaGTTGACTCTTGACATAACG +
Preference number: 5 (lower is better)
Translates to: EWWLYNAVNVLDITKLYTVPMIT*LTLDIT
Trigger: CGTTATGTCAAGAGTCAACAAGGTGATCATTGGCAC...AGTATACAATTTAGTGATATCTAGTACATTCACAGCATTGTACAACCACCACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CAA 90 bp TTATTGGTAGAGCCTAGAAAAAGTGTCATAGCCATTTCTGAGCAAAAATCTGTACTTTGGAGGAGACAATaGCTCGTAATTGGTAGCTAC +
Preference number: 5 (lower is better)
Translates to: LLVEPRKSVIAISEQKSVLWRRQ*LVIGSY
Trigger: GTAGCTACCAATTACGAGCAATTGTCTCCTCCAAAG...TACAGATTTTTGCTCAGAAATGGCTATGACACTTTTTCTAGGCTCTACCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp AGGGAGAGATTACTTAATGGGTACAGGGTGTTTTTCTACAGTGGAGAAAAAGTTAGTGGAGAAAAAGTTTaGAAACTAGAGAGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: RERLLNGYRVFFYSGEKVSGEKV*KLESGG
Trigger: ACCACCACTCTCTAGTTTCAAAACTTTTTCTCCACT...AACTTTTTCTCCACTGTAGAAAAACACCCTGTACCCATTAAGTAATCTCTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS-3UTR CAA 90 bp CAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTTGTTAAACATAAGCCCACAGGCTATTaGTTAAACATGCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: QNVVSNHLFKAHRLFVKHKPTGY*LNMQIL
Trigger: AAGAATCTGCATGTTTAACAAATAGCCTGTGGGCTT...ATGTTTAACAAATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp CAAAATGTGGTTTCAAATCACCTGTTCAAAGCCCACAGGCTATTTGTTAAACATCCAGAGTTGCCAAATTaGAGTTTTCAAGAAAAGCAA +
Preference number: 5 (lower is better)
Translates to: QNVVSNHLFKAHRLFVKHPELPN*SFQEKQ
Trigger: TTGCTTTTCTTGAAAACTCAAATTTGGCAACTCTGG...ATGTTTAACAAATAGCCTGTGGGCTTTGAACAGGTGATTTGAAACCACATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS-3UTR CAA 90 bp TTATTGGTAGAGCCTAGAAAAAGTGTCATAGCCATTTCTGAGCAAAAATCTGTATTCAAGTGGCTTTTATaGGTAGAGCCTAGAAAAAGT +
Preference number: 5 (lower is better)
Translates to: LLVEPRKSVIAISEQKSVFKWLL*VEPRKS
Trigger: ACTTTTTCTAGGCTCTACCAATAAAAGCCACTTGAA...TACAGATTTTTGCTCAGAAATGGCTATGACACTTTTTCTAGGCTCTACCAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000266126.10
CDS CAA 72 bp AGGTTCGCCGGCGGAGGCAGGCCGGCCTCACCCGCGTaGCTCCAGCGGTGGTCCGTGATGATCTGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: RFAGGGRPASPA*LQRWSVMIWRS
Trigger: GCTGCGCCAGATCATCACGGACCACCGCTGGAGCAACGCGGGTGAGGCCGGCCTGCCTCCGCCGGCGAACCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS CAA 90 bp ACAGGGGCCAGGTTCGCCGGCGGAGGCAGGCCGGCCTCACCCGCGTaGCTCCAGCGGTGGTCCGTGATGATCTGGCGCAGCAACCCTAGG +
Preference number: 6 (lower is better)
Translates to: TGARFAGGGRPASPA*LQRWSVMIWRSNPR
Trigger: CCTAGGGTTGCTGCGCCAGATCATCACGGACCACCGCTGGAGCAACGCGGGTGAGGCCGGCCTGCCTCCGCCGGCGAACCTGGCCCCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS GCA 72 bp CGGAGGGCTGAGCGGCCGTCATCCTCCTGCCCTCTCTaGGGATCAGCTCCATCAGCTCCCCCGCGTTGCTCC +
Preference number: 6 (lower is better)
Translates to: RRAERPSSSCPL*GSAPSAPPRCS
Trigger: GGAGCAACGCGGGGGAGCTGATGGAGCTGATCCGCAGAGAGGGCAGGAGGATGACGGCCGCTCAGCCCTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000555522.1
ENST00000556028.5
CDS GCA 72 bp CGGTGGTCTCGGAGGGCTGAGCGGCCGTCATCCTCCTaGCCTCTCTGCGGATCAGCTCCATCAGCTCCCCCG +
Preference number: 6 (lower is better)
Translates to: RWSRRAERPSSS*PLCGSAPSAPP
Trigger: CGGGGGAGCTGATGGAGCTGATCCGCAGAGAGGGCAGGAGGATGACGGCCGCTCAGCCCTCCGAGACCACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000555522.1
ENST00000556028.5
CDS CCA 72 bp GGAGGCAGGCCGGCCTCACCCGCGTTGCTCCAGCGGTaGTCCGTGATGATCTGGCGCAGCAACCCTAGGGTC +
Preference number: 6 (lower is better)
Translates to: GGRPASPALLQR*SVMIWRSNPRV
Trigger: GACCCTAGGGTTGCTGCGCCAGATCATCACGGACCACCGCTGGAGCAACGCGGGTGAGGCCGGCCTGCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS TCA 72 bp CTCCGCACCATGTTGCCCACGGTGGTCTCGGAGGGCTaGGCGGCCGTCATCCTCCTGCCCTCTCTGCGGATC +
Preference number: 6 (lower is better)
Translates to: LRTMLPTVVSEG*AAVILLPSLRI
Trigger: GATCCGCAGAGAGGGCAGGAGGATGACGGCCGCTCAGCCCTCCGAGACCACCGTGGGCAACATGGTGCGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000553539.1
ENST00000555522.1
ENST00000556028.5
CDS GCA 72 bp GCAACCCTAGGGTCTCCCGAGCCATTTCCTCGGAGCTaGGCGGCCCACCACCCCGCTTCAGGGTCTCCACGA +
Preference number: 6 (lower is better)
Translates to: ATLGSPEPFPRS*AAHHPASGSPR
Trigger: TCGTGGAGACCCTGAAGCGGGGTGGTGGGCCGCGCAGCTCCGAGGAAATGGCTCGGGAGACCCTAGGGTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000553539.1
ENST00000555522.1
ENST00000556028.5
CDS GCA 72 bp CGGTGGTCTCGGAGGGCTGAGCGGCCGTCATCCTCCTaGCCTCTCTGCGGATCAGCTCCATCAGCTCCCCTA +
Preference number: 6 (lower is better)
Translates to: RWSRRAERPSSS*PLCGSAPSAPL
Trigger: TAGGGGAGCTGATGGAGCTGATCCGCAGAGAGGGCAGGAGGATGACGGCCGCTCAGCCCTCCGAGACCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS CCA 72 bp TCCCCCGCGTTGCTCCAGCGGTGGTCCGTGATGATCTaGCGCAGCAACCCTAGGGTCTCCCGAGCCATTTCC +
Preference number: 6 (lower is better)
Translates to: SPALLQRWSVMI*RSNPRVSRAIS
Trigger: GGAAATGGCTCGGGAGACCCTAGGGTTGCTGCGCCAGATCATCACGGACCACCGCTGGAGCAACGCGGGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000555522.1
ENST00000556028.5
CDS GCA 72 bp CGGAGGGCTGAGCGGCCGTCATCCTCCTGCCCTCTCTaGGGATCAGCTCCATCAGCTCCCCTACAGTCCAAA +
Preference number: 6 (lower is better)
Translates to: RRAERPSSSCPL*GSAPSAPLQSK
Trigger: TTTGGACTGTAGGGGAGCTGATGGAGCTGATCCGCAGAGAGGGCAGGAGGATGACGGCCGCTCAGCCCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS CCA 72 bp ATCAGCTCCATCAGCTCCCCCGCGTTGCTCCAGCGGTaGTCCGTGATGATCTGGCGCAGCAACCCTAGGGTC +
Preference number: 6 (lower is better)
Translates to: ISSISSPALLQR*SVMIWRSNPRV
Trigger: GACCCTAGGGTTGCTGCGCCAGATCATCACGGACCACCGCTGGAGCAACGCGGGGGAGCTGATGGAGCTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000555522.1
ENST00000556028.5
CDS CCA 72 bp TCACCCGCGTTGCTCCAGCGGTGGTCCGTGATGATCTaGCGCAGCAACCCTAGGGTCTCCCGAGCCATTTCC +
Preference number: 6 (lower is better)
Translates to: SPALLQRWSVMI*RSNPRVSRAIS
Trigger: GGAAATGGCTCGGGAGACCCTAGGGTTGCTGCGCCAGATCATCACGGACCACCGCTGGAGCAACGCGGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS CAA 90 bp AGCCCAGGACGTGAGCCTGACCTGCCATACTCCTCCCGGATAATCTaGAGCACTCTCCGCACCATGTTGCCCACGGTGGTCTCGGAGGGC +
Preference number: 6 (lower is better)
Translates to: SPGREPDLPYSSRII*STLRTMLPTVVSEG
Trigger: GCCCTCCGAGACCACCGTGGGCAACATGGTGCGGAGAGTGCTCAAGATTATCCGGGAGGAGTATGGCAGGTCAGGCTCACGTCCTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS CAA 90 bp TCGTCGCTGCGTCCATGGAGTCTGCCATACTCCTCCCGGATAATCTaGAGCACTCTCCGCACCATGTTGCCCACGGTGGTCTCGGAGGGC +
Preference number: 6 (lower is better)
Translates to: SSLRPWSLPYSSRII*STLRTMLPTVVSEG
Trigger: GCCCTCCGAGACCACCGTGGGCAACATGGTGCGGAGAGTGCTCAAGATTATCCGGGAGGAGTATGGCAGACTCCATGGACGCAGCGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000555522.1
ENST00000556028.5
CDS CAA 72 bp CGTGAGCCTGACCTGCCATACTCCTCCCGGATAATCTaGAGCACTCTCCGCACCATGTTGCCCACGGTGGTC +
Preference number: 6 (lower is better)
Translates to: REPDLPYSSRII*STLRTMLPTVV
Trigger: GACCACCGTGGGCAACATGGTGCGGAGAGTGCTCAAGATTATCCGGGAGGAGTATGGCAGGTCAGGCTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS TCA 72 bp CCTCCGGATGTCAACAGTTTGTGCAGGGACTCCTGCTaGTCACTCTCGTCGCTGCGTCCATGGAGTCTGCCA +
Preference number: 6 (lower is better)
Translates to: PPDVNSLCRDSC*SLSSLRPWSLP
Trigger: TGGCAGACTCCATGGACGCAGCGACGAGAGTGATCAGCAGGAGTCCCTGCACAAACTGTTGACATCCGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000555522.1
ENST00000556028.5
CDS CAA 72 bp CGTCCATGGAGTCTGCCATACTCCTCCCGGATAATCTaGAGCACTCTCCGCACCATGTTGCCCACGGTGGTC +
Preference number: 6 (lower is better)
Translates to: RPWSLPYSSRII*STLRTMLPTVV
Trigger: GACCACCGTGGGCAACATGGTGCGGAGAGTGCTCAAGATTATCCGGGAGGAGTATGGCAGACTCCATGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000555522.1
ENST00000556028.5
CDS TCA 72 bp CGGGAGAAGCCAATGGTCATGATCACCTCATTGGAGTaGATGTGCTCCAGAGCCTGGGCTGCAATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: REKPMVMITSLE*MCSRAWAAMFS
Trigger: GGAGAACATTGCAGCCCAGGCTCTGGAGCACATTCACTCCAATGAGGTGATCATGACCATTGGCTTCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000553539.1
ENST00000555522.1
ENST00000556028.5
CDS GCA 72 bp GTTTGTGCAGGGACTCCTGCTGATCACTCTCGTCGCTaGGTCCATGGAGTCTATAGAGGCAACAAGACCCAA +
Preference number: 6 (lower is better)
Translates to: VCAGTPADHSRR*VHGVYRGNKTQ
Trigger: TTGGGTCTTGTTGCCTCTATAGACTCCATGGACGCAGCGACGAGAGTGATCAGCAGGAGTCCCTGCACAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS TCA 72 bp GGAAGGCCTCTACTGTTCGGGAGAAGCCAATGGTCATaGTCACCTCATTGGAGTGAATGTGCTCCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: GRPLLFGRSQWS*SPHWSECAPEP
Trigger: AGGCTCTGGAGCACATTCACTCCAATGAGGTGATCATGACCATTGGCTTCTCCCGAACAGTAGAGGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000553539.1
ENST00000555522.1
ENST00000556028.5
CDS TCA 72 bp TCCAAAAGAGAGAGGATAAGAGGAGCCAACGCGAAGTaGGGCCTGGGAAATTTTCAGCCCTGGGATCGGGAA +
Preference number: 6 (lower is better)
Translates to: SKRERIRGANAK*GLGNFQPWDRE
Trigger: TTCCCGATCCCAGGGCTGAAAATTTCCCAGGCCTCACTTCGCGTTGGCTCCTCTTATCCTCTCTCTTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553539.1
CDS CAA 90 bp CACTCTGCTACAATGACATGGAATTTCCTCTTTCGGGCAGCCTCTTaGAGGAAGGCCTCTACTGTTCGGGAGAAGCCAATGGTCATGATC +
Preference number: 6 (lower is better)
Translates to: HSATMTWNFLFRAAS*RKASTVREKPMVMI
Trigger: GATCATGACCATTGGCTTCTCCCGAACAGTAGAGGCCTTCCTCAAAGAGGCTGCCCGAAAGAGGAAATTCCATGTCATTGTAGCAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000553539.1
ENST00000555522.1
ENST00000556028.5
CDS GCA 72 bp AAAGGACAGGCCCTGTGGAGAAAGTTTGAACATAGGTaGACAGACGATGAGTGGGGTGGAATGGTGTTTTGC +
Preference number: 6 (lower is better)
Translates to: KGQALWRKFEHR*TDDEWGGMVFC
Trigger: GCAAAACACCATTCCACCCCACTCATCGTCTGTGCACCTATGTTCAAACTTTCTCCACAGGGCCTGTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554748.2
CDS CAA 72 bp ACAATGACATGGAATTTCCTCTTTCGGGCAGCCTCTTaGAGGAAGGCCTCTACTGTTCGGGAGAAGCCAATG +
Preference number: 6 (lower is better)
Translates to: TMTWNFLFRAAS*RKASTVREKPM
Trigger: CATTGGCTTCTCCCGAACAGTAGAGGCCTTCCTCAAAGAGGCTGCCCGAAAGAGGAAATTCCATGTCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266126.10
ENST00000553401.5
ENST00000553539.1
ENST00000555522.1
ENST00000556028.5
CDS GCA 72 bp GTAGAGTTCACTCATCAGGCGGTAGATGTAGGAAGGTaGATTCCCACCAATGTTGGAGATAAAGAGGGTAAT +
Preference number: 6 (lower is better)
Translates to: VEFTHQAVDVGR*IPTNVGDKEGN
Trigger: ATTACCCTCTTTATCTCCAACATTGGTGGGAATGCACCTTCCTACATCTACCGCCTGATGAGTGAACTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266126.10
ENST00000556668.1
CDS GCA 72 bp AATGGCAGCATCAGTCATGACAGTTGTCTCAATACCTaGTTTGGACAAATTCACAGCCATTTCATGACCCTG +
Preference number: 6 (lower is better)
Translates to: NGSISHDSCLNT*FGQIHSHFMTL
Trigger: CAGGGTCATGAAATGGCTGTGAATTTGTCCAAAGCAGGTATTGAGACAACTGTCATGACTGATGCTGCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266126.10
ENST00000553401.5
CDS CCA 72 bp CTCAGTGTCTCAAAGTCTTGCTTATCAATTCAAGGTTaGAATGGCCCTACCCATCTCTCGTTTATTTCTTCT +
Preference number: 6 (lower is better)
Translates to: LSVSKSCLSIQG*NGPTHLSFISS
Trigger: AGAAGAAATAAACGAGAGATGGGTAGGGCCATTCCAACCTTGAATTGATAAGCAAGACTTTGAGACACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553539.1
ENST00000555522.1
CDS CAA 72 bp TCTCAGTGTCTCAAAGTCTTGCTTATCAATTCAAGGTaGGAATGGCCCTACCCATCTCTCGTTTATTTCTTC +
Preference number: 6 (lower is better)
Translates to: SQCLKVLLINSR*EWPYPSLVYFF
Trigger: GAAGAAATAAACGAGAGATGGGTAGGGCCATTCCAACCTTGAATTGATAAGCAAGACTTTGAGACACTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553539.1
ENST00000555522.1
CDS CCA 72 bp TGTCTCAAAGTCTTGCTTATCAATTCAAGGTTGGAATaGCCCTACCCATCTCTCGTTTATTTCTTCTTCATT +
Preference number: 6 (lower is better)
Translates to: CLKVLLINSRLE*PYPSLVYFFFI
Trigger: AATGAAGAAGAAATAAACGAGAGATGGGTAGGGCCATTCCAACCTTGAATTGATAAGCAAGACTTTGAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553539.1
ENST00000555522.1
CDS CAA 72 bp AGGACGAACACCTTGAAAATTCACTTAATGTTTTACTaGATCTTCTCAGTGTCTCAAAGTCTTGCTTATCAA +
Preference number: 6 (lower is better)
Translates to: RTNTLKIHLMFY*IFSVSQSLAYQ
Trigger: TTGATAAGCAAGACTTTGAGACACTGAGAAGATCAAGTAAAACATTAAGTGAATTTTCAAGGTGTTCGTCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553539.1