RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF2AK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000055332

Ensembl transcript IDs: ENST00000233057.9, ENST00000395127.6, ENST00000405334.5, ENST00000411537.7, ENST00000462861.1, ENST00000496059.1, ENST00000647926.1, ENST00000679507.1, ENST00000679979.1, ENST00000680273.1, ENST00000681329.1, ENST00000681463.1, ENST00000681507.1, ENST00000681516.1

Found 1260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGACCTGCATGGGTGGGGCTTACTCGGGAAACACTGAATATGGGATaGATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCCAGTGAAC +
Preference number: 1 (lower is better)
Translates to: RPAWVGLTRETLNMG*IMEASRGAWPCPVN
Trigger: GTTCACTGGGCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTCCCGAGTAAGCCCCACCCATGCAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 90 bp CCTGGGTGGTCTCCTCTCTACTCATCTAACACCCTGGCATATAGTTaGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGTGCTCAGCAGA +
Preference number: 1 (lower is better)
Translates to: PGWSPLYSSNTLAYS*KAHWAVTSSPVLSR
Trigger: TCTGCTGAGCACAGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGATGAGTAGAGAGGAGACCACCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 90 bp AAAAAGAGCCTGGCACCTTCTCCCTCGCTCTCTTGCTTCCTCTCTTaGCATATGATCTCTGCACATCCGGCTCCCCTTCACCTTCCACCA +
Preference number: 1 (lower is better)
Translates to: KKSLAPSPSLSCFLS*HMISAHPAPLHLPP
Trigger: TGGTGGAAGGTGAAGGGGAGCCGGATGTGCAGAGATCATATGGCAAGAGAGGAAGCAAGAGAGCGAGGGAGAAGGTGCCAGGCTCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 90 bp TGTCCAGACTTCCTGGGTGGTCTCCTCTCTACTCATCTAACACCCTaGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTG +
Preference number: 1 (lower is better)
Translates to: CPDFLGGLLSTHLTP*HIVGRPTGLSLLAL
Trigger: CAGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGATGAGTAGAGAGGAGACCACCCAGGAAGTCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR TCA 90 bp GGTAAAACTGCAGACCTGCATGGGTGGGGCTTACTCGGGAAACACTaGATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTT +
Preference number: 1 (lower is better)
Translates to: GKTADLHGWGLLGKH*IWDASWKPPEEHGL
Trigger: AAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTCCCGAGTAAGCCCCACCCATGCAGGTCTGCAGTTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 90 bp CCTTCACCTTCCACCATGAGTGGAAGCAGCCGGGGAAGAAGCAGATaGTGGTGCCATGTTTCTTGTACAGCCTGCAGAACTGTAAGTCAT +
Preference number: 1 (lower is better)
Translates to: PSPSTMSGSSRGRSR*WCHVSCTACRTVSH
Trigger: ATGACTTACAGTTCTGCAGGCTGTACAAGAAACATGGCACCAGCATCTGCTTCTTCCCCGGCTGCTTCCACTCATGGTGGAAGGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 90 bp CCTCTCTACTCATCTAACACCCTGGCATATAGTTGGAAGGCCCACTaGGCTGTCACTTCTAGCCCTGTGCTCAGCAGAAAGCCATCTTAC +
Preference number: 1 (lower is better)
Translates to: PLYSSNTLAYSWKAH*AVTSSPVLSRKPSY
Trigger: GTAAGATGGCTTTCTGCTGAGCACAGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGATGAGTAGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 90 bp CTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTaGCCAGTGAACTGCAGCCCAGTGAATCTCATTTTAGACTTCTGG +
Preference number: 1 (lower is better)
Translates to: LNMGCIMEASRGAWP*PVNCSPVNLILDFW
Trigger: CCAGAAGTCTAAAATGAGATTCACTGGGCTGCAGTTCACTGGGCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 90 bp TTCAGTGCAGTGTTCTGGCAGCACCTCAAGCTCACTGTCACCAAATaGGATTCAACGTCTTTCCTCCCAAACATGCTCTACCTCACCATG +
Preference number: 1 (lower is better)
Translates to: FSAVFWQHLKLTVTK*DSTSFLPNMLYLTM
Trigger: CATGGTGAGGTAGAGCATGTTTGGGAGGAAAGACGTTGAATCCCATTTGGTGACAGTGAGCTTGAGGTGCTGCCAGAACACTGCACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATaGCCTTGCCCAGTGAACTGCAGCCCAGTGAATCTCATTTTAGAC +
Preference number: 1 (lower is better)
Translates to: ETLNMGCIMEASRGA*PCPVNCSPVNLILD
Trigger: GTCTAAAATGAGATTCACTGGGCTGCAGTTCACTGGGCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 90 bp ATCTTGTATTTCCTACAGTCTCCTCCTATCTTCAGTGCAGTGTTCTaGCAGCACCTCAAGCTCACTGTCACCAAATGGGATTCAACGTCT +
Preference number: 1 (lower is better)
Translates to: ILYFLQSPPIFSAVF*QHLKLTVTKWDSTS
Trigger: AGACGTTGAATCCCATTTGGTGACAGTGAGCTTGAGGTGCTGCCAGAACACTGCACTGAAGATAGGAGGAGACTGTAGGAAATACAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 90 bp GGGAAAATAAATGAACCAGGATCAAATCCAGCTTCTAGGTCTAACTaGACACTCTGGGGATACTCTCAGTCAAATCCTGAGTGGAGGAAA +
Preference number: 1 (lower is better)
Translates to: GKINEPGSNPASRSN*TLWGYSQSNPEWRK
Trigger: TTTCCTCCACTCAGGATTTGACTGAGAGTATCCCCAGAGTGTCCAGTTAGACCTAGAAGCTGGATTTGATCCTGGTTCATTTATTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 90 bp TTGAGGCCTGGATGGCCGTTTAGAGAGAAAGAGTTAACATTTCAGTaGAGACCTTTCCTATCTTGTATTTCCTACAGTCTCCTCCTATCT +
Preference number: 1 (lower is better)
Translates to: LRPGWPFREKELTFQ*RPFLSCISYSLLLS
Trigger: AGATAGGAGGAGACTGTAGGAAATACAAGATAGGAAAGGTCTCCACTGAAATGTTAACTCTTTCTCTCTAAACGGCCATCCAGGCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 90 bp CTTTTGAGTTCCTGCTTTCTTCACAGCAGTGCACTCACTACTTTCTaGTATACAAGAAGAACAGCTTGTCCCCACTCTTACAGTGTAATG +
Preference number: 1 (lower is better)
Translates to: LLSSCFLHSSALTTF*YTRRTACPHSYSVM
Trigger: CATTACACTGTAAGAGTGGGGACAAGCTGTTCTTCTTGTATACCAGAAAGTAGTGAGTGCACTGCTGTGAAGAAAGCAGGAACTCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR TCA 90 bp TTTGCCACATGTGTGCCCTCTTTCTCTCTCCATGTTGATTTTTGCTaGACATTGAAAGTTGCAGACATCATGACACACTTGGCCTCTAAA +
Preference number: 1 (lower is better)
Translates to: FATCVPSFSLHVDFC*TLKVADIMTHLASK
Trigger: TTTAGAGGCCAAGTGTGTCATGATGTCTGCAACTTTCAATGTTCAGCAAAAATCAACATGGAGAGAGAAAGAGGGCACACATGTGGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR TCA 90 bp ACAAAGTACCCCTCAAATACATGTGGCTCTTGGGGTTCATCTGACTaGGACTTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAAC +
Preference number: 1 (lower is better)
Translates to: TKYPSNTCGSWGSSD*DLYLLEWHQNPATN
Trigger: GTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAAGTCTCAGTCAGATGAACCCCAAGAGCCACATGTATTTGAGGGGTACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 90 bp TTTGCCCTTAGTCCCACAAATTATGTAGCTGGCCATACACACACATaGACACATACCACATACCCACATGTATATATGCATATATTGTGT +
Preference number: 1 (lower is better)
Translates to: FALSPTNYVAGHTHT*THTTYPHVYMHILC
Trigger: ACACAATATATGCATATATACATGTGGGTATGTGGTATGTGTGCATGTGTGTGTATGGCCAGCTACATAATTTGTGGGACTAAGGGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR TCA 90 bp AAATCACTGAAAGTGGAACAATCAGACATCATGTTCCTCCTGAAATaGTGTAAGAGAAAGTGTATAGCATCACCTATGGAGTATTCTTGG +
Preference number: 1 (lower is better)
Translates to: KSLKVEQSDIMFLLK*CKRKCIASPMEYSW
Trigger: CCAAGAATACTCCATAGGTGATGCTATACACTTTCTCTTACATCATTTCAGGAGGAACATGATGTCTGATTGTTCCACTTTCAGTGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCTGATGGGAGGTGTTTaGGTCATGGGGGAAGACCCC +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYLMGGV*VMGEDP
Trigger: GGGGTCTTCCCCCATGACCCAAACACCTCCCATCAG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCTGATGGGAGGTGTTTaGGTCATGGGGGAAGACCCC +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCLMGGV*VMGEDP
Trigger: GGGGTCTTCCCCCATGACCCAAACACCTCCCATCAG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTCACCCAGGCTGGAGTaGAATGGCGTGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSPRLE*NGVISA
Trigger: AGCTGAGATCACGCCATTGCACTCCAGCCTGGGTGA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTCACCCAGGCTGGAGTaGAATGGCGTGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCSPRLE*NGVISA
Trigger: AGCTGAGATCACGCCATTGCACTCCAGCCTGGGTGA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACACCCTGGCATATAGTTaGAAGGCCCACTGGGCTGTC +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYTLAYS*KAHWAV
Trigger: GACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCTTGTCCAGACTTCCTaGGTGGTCTCCTCTCTACTC +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCLVQTS*VVSSLL
Trigger: GAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAGGCAGAAGTTGCAGTaGGCCAAGACTGTGTCATTG +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCRQKLQ*AKTVSL
Trigger: CAATGACACAGTCTTGGCTCACTGCAACTTCTGCCT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCTGATGGGAGGTGTTTaGGTCATGGGGGAAGACCCC +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFLMGGV*VMGEDP
Trigger: GGGGTCTTCCCCCATGACCCAAACACCTCCCATCAG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTCCCAGTGTTGGAGGTaGGGCCTGATGGGAGGTGTT +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFSQCWR*GLMGGV
Trigger: AACACCTCCCATCAGGCCCCACCTCCAACACTGGGA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CAA 90 bp ACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTaGCCCAGTGAACTGCAGCCCAGTGAATCTCATTTTAGACTTCTG +
Preference number: 2 (lower is better)
Translates to: TEYGMHHGSLQRSMA*PSELQPSESHFRLL
Trigger: CAGAAGTCTAAAATGAGATTCACTGGGCTGCAGTTCACTGGGCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTCACTTCTAGCCCTGTaGTCAGCAGAAAGCCATCTT +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSLLAL*SAESHL
Trigger: AAGATGGCTTTCTGCTGAGCACAGGGCTAGAAGTGA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTCACCCAGGCTGGAATaGAGTAACATGATCATGGCT +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSPRLE*SNMIMA
Trigger: AGCCATGATCATGTTACTGCATTCCAGCCTGGGTGA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTCACCCAGGCTGGAATaGAGTAACATGATCATGGCT +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCSPRLE*SNMIMA
Trigger: AGCCATGATCATGTTACTGCATTCCAGCCTGGGTGA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAGGCGTGAGCCACCATaGCCAGCCAGAGTAGGAATA +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFRREPP*PARVGI
Trigger: TATTCCTACTCTGGCTGGGCATGGTGGCTCACGCCT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCTTTCCTCCCAAACATaGTCTACCTCACCATGTCGA +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCLSSQT*STSPCR
Trigger: TCGACATGGTGAGGTAGAGCATGTTTGGGAGGAAAG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACGCTTCTAGGTCTAACTaGACACTCTGGGGATACTCT +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYASRSN*TLWGYS
Trigger: AGAGTATCCCCAGAGTGTCCAGTTAGACCTAGAAGC...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAATCTCAAATTATGGTaGACACTCAGTGGGGACTGC +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCNLKLW*TLSGDC
Trigger: GCAGTCCCCACTGAGTGTTCACCATAATTTGAGATT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACATTTTGCCACATGTGTaGCCTCTTTCTCTCTCCATG +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYILPHV*PLSLSM
Trigger: CATGGAGAGAGAAAGAGGGCACACATGTGGCAAAAT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGTTGGAAGGCCCACTaGGCTGTCACTTCTAGCCCT +
Preference number: 2 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQSWKAH*AVTSSP
Trigger: AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCTTGTCCAGACTTCCTaGGTGGTCTCCTCTCTACTC +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFLVQTS*VVSSLL
Trigger: GAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACGGAAGAAGCAGATGCTaGTGCCATGTTTCTTGTACA +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYGRSRC*CHVSCT
Trigger: TGTACAAGAAACATGGCACCAGCATCTGCTTCTTCC...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCATTAACCTGGAGTGGTaGCAGATACCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCINLEW*QIPVIP
Trigger: TGGGATTACAGGTATCTGCCACCACTCCAGGTTAAT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATTTAGAACAAAGAGATaGGGCTGGGCGCGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEFRTKR*GWARWL
Trigger: GAGCCACCGCGCCCAGCCTCATCTCTTTGTTCTAAA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATTTAGAACAAAGAGATaGGGCTGGGCGCGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARFRTKR*GWARWL
Trigger: GAGCCACCGCGCCCAGCCTCATCTCTTTGTTCTAAA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTTGGGGGAAAATAAATaGACCAGGATCAAATCCAGC +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYLGENK*TRIKSS
Trigger: GCTGGATTTGATCCTGGTTCATTTATTTTCCCCCAA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACACAGGCATTAGCTACTaGGTCCAGCTTTTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYTGISY*VQLLSF
Trigger: AAAAGACAAAAGCTGGACGCAGTAGCTAATGCCTGT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAGGCGTGAGCCACCATaGCCAGCCAGAGTAGGAATA +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAERREPP*PARVGI
Trigger: TATTCCTACTCTGGCTGGGCATGGTGGCTCACGCCT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAGTTGGAAGGCCCACTaGGCTGTCACTTCTAGCCCT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESWKAH*AVTSSP
Trigger: AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTCCAGACTTCCTGGGTaGTCTCCTCTCTACTCATCT +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFSRLPG*SPLYSS
Trigger: AGATGAGTAGAGAGGAGACCACCCAGGAAGTCTGGA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACGAGTTCAAAACCAGCTaGGTCAACATGGTGAAATTC +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYEFKTS*VNMVKF
Trigger: GAATTTCACCATGTTGACCCAGCTGGTTTTGAACTC...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCACAAATTATGTAGCTaGCCATACACACACATGCAC +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYHKLCS*PYTHMH
Trigger: GTGCATGTGTGTGTATGGCCAGCTACATAATTTGTG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCCCAAAATCTCATGTTaGAATTTGATCCCAGTGTTG +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCPKISC*NLIPVL
Trigger: CAACACTGGGATCAAATTTCAACATGAGATTTTGGG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTGGGTGATGCTAAATTaGATCACTTGGTTATTGTGG +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCWVMLN*ITWLLW
Trigger: CCACAATAACCAAGTGATTCAATTTAGCATCACCCA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTGCCCCTGTCCTCCTCTaGGTAAGAGGATACTTTTTA +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFAPVLL*VRGYFL
Trigger: TAAAAAGTATCCTCTTACTCAGAGGAGGACAGGGGC...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCTCTCAGTCAAATCCTaGGTGGAGGAAATTCCACAG +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFLSVKS*VEEIPQ
Trigger: CTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTCACTTCTAGCCCTGTaGTCAGCAGAAAGCCATCTT +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFSLLAL*SAESHL
Trigger: AAGATGGCTTTCTGCTGAGCACAGGGCTAGAAGTGA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCAATGGCTAATATTTTaGCACATGTGTGCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYQWLIF*HMCALF
Trigger: AAAGAGGGCACACATGTGGCAAAATATTAGCCATTG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAGTATTGATATTTGTTaGAGCTGGGTGATGGGTAGA +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCSIDIC*SWVMGR
Trigger: TCTACCCATCACCCAGCTGCAACAAATATCAATACT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGTCCAGACTTCCTGGGTaGTCTCCTCTCTACTCATCT +
Preference number: 2 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQSRLPG*SPLYSS
Trigger: AGATGAGTAGAGAGGAGACCACCCAGGAAGTCTGGA...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACTTGTCCAGACTTCCTaGGTGGTCTCCTCTCTACTC +
Preference number: 2 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARLVQTS*VVSSLL
Trigger: GAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACTTGTCCAGACTTCCTaGGTGGTCTCCTCTCTACTC +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAELVQTS*VVSSLL
Trigger: GAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAAAATTAACCTGGAGTaGTGGCAGATACCTGTAATC +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYKINLE*WQIPVI
Trigger: GATTACAGGTATCTGCCACCACTCCAGGTTAATTTT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCTAGTTTCAAAGTATTaGTTGGGCCATACCTTGCTT +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYLVSKY*LGHTLL
Trigger: AAGCAAGGTATGGCCCAACCAATACTTTGAAACTAG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCTAGTTTCAAAGTATTaGTTGGGCCATACCTTGCTT +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCLVSKY*LGHTLL
Trigger: AAGCAAGGTATGGCCCAACCAATACTTTGAAACTAG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTTTAGAACAAAGAGATaGGGCTGGGCGCGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLFRTKR*GWARWL
Trigger: GAGCCACCGCGCCCAGCCTCATCTCTTTGTTCTAAA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTTTAGAACAAAGAGATaGGGCTGGGCGCGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLFRTKR*GWARWL
Trigger: GAGCCACCGCGCCCAGCCTCATCTCTTTGTTCTAAA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTCTGCATATATTTTCTaGAAACCTGCTTTGTTCGCT +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCSAYIF*KPALFA
Trigger: AGCGAACAAAGCAGGTTTTCAGAAAATATATGCAGA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTCTGCATATATTTTCTaGAAACCTGCTTTGTTCGCT +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSAYIF*KPALFA
Trigger: AGCGAACAAAGCAGGTTTTCAGAAAATATATGCAGA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAATCTCAAATTATGGTaGACACTCAGTGGGGACTGC +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFNLKLW*TLSGDC
Trigger: GCAGTCCCCACTGAGTGTTCACCATAATTTGAGATT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCACATCATGTTCCTCCTaGAATGATGTAAGAGAAAGT +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCTSCSS*NDVRES
Trigger: ACTTTCTCTTACATCATTTCAGGAGGAACATGATGT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACACATCATGTTCCTCCTaGAATGATGTAAGAGAAAGT +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYTSCSS*NDVRES
Trigger: ACTTTCTCTTACATCATTTCAGGAGGAACATGATGT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCTTGGAGGTAATCTTTaGTGCTTACCTTTCCTTAAT +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCLGGNL*CLPFLN
Trigger: ATTAAGGAAAGGTAAGCATCAAAGATTACCTCCAAG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACGTTTCTTGTACAGCCTaGAGAACTGTAAGTCATATA +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYVSCTA*RTVSHI
Trigger: TATATGACTTACAGTTCTGCAGGCTGTACAAGAAAC...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAGTTGGAAGGCCCACTaGGCTGTCACTTCTAGCCCT +
Preference number: 2 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLSWKAH*AVTSSP
Trigger: AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCACCCTGGCATATAGTTaGAAGGCCCACTGGGCTGTC +
Preference number: 2 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLTLAYS*KAHWAV
Trigger: GACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTACCCTGGCATATAGTTaGAAGGCCCACTGGGCTGTC +
Preference number: 2 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPTLAYS*KAHWAV
Trigger: GACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATCCAGACTTCCTGGGTaGTCTCCTCTCTACTCATCT +
Preference number: 2 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARSRLPG*SPLYSS
Trigger: AGATGAGTAGAGAGGAGACCACCCAGGAAGTCTGGA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCTGATGGGAGGTGTTTaGGTCATGGGGGAAGACCCC +
Preference number: 2 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLLMGGV*VMGEDP
Trigger: GGGGTCTTCCCCCATGACCCAAACACCTCCCATCAG...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTCCCAGTGTTGGAGGTaGGGCCTGATGGGAGGTGTT +
Preference number: 2 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVSQCWR*GLMGGV
Trigger: AACACCTCCCATCAGGCCCCACCTCCAACACTGGGA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACGGACTCCCGAGTAGCTaGGATTACAGGCGCCTACCA +
Preference number: 2 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENGLPSS*DYRRLP
Trigger: TGGTAGGCGCCTGTAATCCCAGCTACTCGGGAGTCC...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACACAGGATGGCTTCATaGACATGCAACCTGTGCAGT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEHRMAS*TCNLCS
Trigger: ACTGCACAGGTTGCATGTCCATGAAGCCATCCTGTG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATGCACACACACAGGATaGCTTCATGGACATGCAACC +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAECTHTG*LHGHAT
Trigger: GGTTGCATGTCCATGAAGCCATCCTGTGTGTGTGCA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTATGGTGAACACTCAGTaGGGACTGCATATTGTGAGT +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFMVNTQ*GLHIVS
Trigger: ACTCACAATATGCAGTCCCCACTGAGTGTTCACCAT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAAACTTTGTAGTAGTTaGTACCACCAGAACTCATTG +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCKLCSS*YHQNSL
Trigger: CAATGAGTTCTGGTGGTACCAACTACTACAAAGTTT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CAA 90 bp ACACTAGTGGACCTACCATCCAGCTTAAGGAAGTTACCATTACCTTaGAAAGTCCATTTCCCCAATCACATCATTCCCCTCCCTCAAAGA +
Preference number: 2 (lower is better)
Translates to: TLVDLPSSLRKLPLP*KVHFPNHIIPLPQR
Trigger: TCTTTGAGGGAGGGGAATGATGTGATTGGGGAAATGGACTTTCAAAGGTAATGGTAACTTCCTTAAGCTGGATGGTAGGTCCACTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTTTAGAACAAAGAGATaGGGCTGGGCGCGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENFRTKR*GWARWL
Trigger: GAGCCACCGCGCCCAGCCTCATCTCTTTGTTCTAAA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTTTAGAACAAAGAGATaGGGCTGGGCGCGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISFRTKR*GWARWL
Trigger: GAGCCACCGCGCCCAGCCTCATCTCTTTGTTCTAAA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAAGTTGCAGACATCATaGCACACTTGGCCTCTAAAT +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFKLQTS*HTWPLN
Trigger: ATTTAGAGGCCAAGTGTGTCATGATGTCTGCAACTT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCCAAGACTGTGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPPRLCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCCAAGACTGTGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLPRLCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGG...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTCTGTTTTTAGCTACTaGCTTACAGCACGGTTGTCT +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFSVFSY*LTARLS
Trigger: AGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATCACCCAGGCTGGAATaGAGTAACATGATCATGGCT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESPRLE*SNMIMA
Trigger: AGCCATGATCATGTTACTGCATTCCAGCCTGGGTGA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAGGCGTGAGCCACCATaGCCAGCCAGAGTAGGAATA +
Preference number: 2 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENRREPP*PARVGI
Trigger: TATTCCTACTCTGGCTGGGCATGGTGGCTCACGCCT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCTCGGCCTCCCAGAGTaGTGGGATTATAGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLGLPE*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCACTCTGGGAGGCCGAG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCGAGAAGCATTTTATTTaGCTCACAGTTTTGCCTATT +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCEKHFI*LTVLPI
Trigger: AATAGGCAAAACTGTGAGGCAAATAAAATGCTTCTC...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAGTTGGAAGGCCCACTaGGCTGTCACTTCTAGCCCT +
Preference number: 2 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLSWKAH*AVTSSP
Trigger: AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAGTTGGAAGGCCCACTaGGCTGTCACTTCTAGCCCT +
Preference number: 2 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVSWKAH*AVTSSP
Trigger: AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTACCCTGGCATATAGTTaGAAGGCCCACTGGGCTGTC +
Preference number: 2 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVTLAYS*KAHWAV
Trigger: GACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCTTGTCCAGACTTCCTaGGTGGTCTCCTCTCTACTC +
Preference number: 2 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPLVQTS*VVSSLL
Trigger: GAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTACATTCTCACTAACTaGCCACATCATTTAGTGTTT +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYYILTN*PHHLVF
Trigger: AAACACTAAATGATGTGGCCAGTTAGTGAGAATGTA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTACATTCTCACTAACTaGCCACATCATTTAGTGTTT +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCYILTN*PHHLVF
Trigger: AAACACTAAATGATGTGGCCAGTTAGTGAGAATGTA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGGGACTCCCGAGTAGCTaGGATTACAGGCGCCTACCA +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLGLPSS*DYRRLP
Trigger: TGGTAGGCGCCTGTAATCCCAGCTACTCGGGAGTCC...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCACAAATTATGTAGCTaGCCATACACACACATGCAC +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFHKLCS*PYTHMH
Trigger: GTGCATGTGTGTGTATGGCCAGCTACATAATTTGTG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTATTAGTTGGGTGTGTTaGTGTATGCATGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFISWVC*CMHVVP
Trigger: TGGGACTACATGCATACACCAACACACCCAACTAAT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTTTCAAAGTATTGGTTaGGCCATACCTTGCTTTAAA +
Preference number: 2 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYFQSIG*AIPCFK
Trigger: TTTAAAGCAAGGTATGGCCCAACCAATACTTTGAAA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTTTCAAAGTATTGGTTaGGCCATACCTTGCTTTAAA +
Preference number: 2 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCFQSIG*AIPCFK
Trigger: TTTAAAGCAAGGTATGGCCCAACCAATACTTTGAAA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAGGCAGAAGTTGCAGTaGGCCAAGACTGTGTCATTG +
Preference number: 2 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLRQKLQ*AKTVSL
Trigger: CAATGACACAGTCTTGGCTCACTGCAACTTCTGCCT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCAGGCAGAAGTTGCAGTaGGCCAAGACTGTGTCATTG +
Preference number: 2 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLRQKLQ*AKTVSL
Trigger: CAATGACACAGTCTTGGCTCACTGCAACTTCTGCCT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAGTTACCATTACCTTTaGAAGTCCATTTCCCCAATC +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFSYHYL*KSISPI
Trigger: GATTGGGGAAATGGACTTTCAAAGGTAATGGTAACT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCCCAAAATCTCATGTTaGAATTTGATCCCAGTGTTG +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFPKISC*NLIPVL
Trigger: CAACACTGGGATCAAATTTCAACATGAGATTTTGGG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAGAACGGTAAAGTATTaGTATTTGTTGCAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFRTVKY*YLLQLG
Trigger: ACCCAGCTGCAACAAATATCAATACTTTACCGTTCT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCAAGACTGTGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISPRLCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTGTTGCTGCTATAGTTTaGATGTTTGTCCCCCAAAAT +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFVAAIV*MFVPQN
Trigger: ATTTTGGGGGACAAACATGCAAACTATAGCAGCAAC...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTATGGTAGCTGGTTGCTaGTATAGTTTGCATGTTTGT +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFMVAGC*YSLHVC
Trigger: ACAAACATGCAAACTATAGCAGCAACCAGCTACCAT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAATTTTGCCACATGTGTaGCCTCTTTCTCTCTCCATG +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEILPHV*PLSLSM
Trigger: CATGGAGAGAGAAAGAGGGCACACATGTGGCAAAAT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTCACCCAGGCTGGAGTaGAATGGCGTGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLSPRLE*NGVISA
Trigger: AGCTGAGATCACGCCATTGCACTCCAGCCTGGGTGA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGACCCTGGCATATAGTTaGAAGGCCCACTGGGCTGTC +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLTLAYS*KAHWAV
Trigger: GACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTCCAGACTTCCTGGGTaGTCTCCTCTCTACTCATCT +
Preference number: 2 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLSRLPG*SPLYSS
Trigger: AGATGAGTAGAGAGGAGACCACCCAGGAAGTCTGGA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACTTGTCCAGACTTCCTaGGTGGTCTCCTCTCTACTC +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLLVQTS*VVSSLL
Trigger: GAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATATTTAAAAAGAGCCTaGCACCTTCTCCCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEYLKRA*HLLPRS
Trigger: AGAGCGAGGGAGAAGGTGCCAGGCTCTTTTTAAATA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAATGGTGAACACTCAGTaGGGACTGCATATTGTGAGT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEMVNTQ*GLHIVS
Trigger: ACTCACAATATGCAGTCCCCACTGAGTGTTCACCAT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAGGCAGAAGTTGCAGTaGGCCAAGACTGTGTCATTG +
Preference number: 2 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENRQKLQ*AKTVSL
Trigger: CAATGACACAGTCTTGGCTCACTGCAACTTCTGCCT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTCTGCATATATTTTCTaGAAACCTGCTTTGTTCGCT +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFSAYIF*KPALFA
Trigger: AGCGAACAAAGCAGGTTTTCAGAAAATATATGCAGA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGGGGACTGCATATTGTaGGTTATGTCTCTAGTTAGT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEGDCIL*VMSLVS
Trigger: ACTAACTAGAGACATAACTCACAATATGCAGTCCCC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATTTGTTGCAGCTGGGTaGTGGGTAGAGTTTCATTAT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEFVAAG*WVEFHY
Trigger: ATAATGAAACTCTACCCATCACCCAGCTGCAACAAA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCCAAGACTGTGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFPRLCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCCAAGACTGTGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLPRLCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATCTGTTTTTAGCTACTaGCTTACAGCACGGTTGTCT +
Preference number: 2 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARSVFSY*LTARLS
Trigger: AGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATCTGTTTTTAGCTACTaGCTTACAGCACGGTTGTCT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESVFSY*LTARLS
Trigger: AGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTGTTTCTTGTACAGCCTaGAGAACTGTAAGTCATATA +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFVSCTA*RTVSHI
Trigger: TATATGACTTACAGTTCTGCAGGCTGTACAAGAAAC...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGAGGCAGAAGTTGCAGTaGGCCAAGACTGTGTCATTG +
Preference number: 2 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMRQKLQ*AKTVSL
Trigger: CAATGACACAGTCTTGGCTCACTGCAACTTCTGCCT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAGTTACCATTACCTTTaGAAGTCCATTTCCCCAATC +
Preference number: 2 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARSYHYL*KSISPI
Trigger: GATTGGGGAAATGGACTTTCAAAGGTAATGGTAACT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAGTTACCATTACCTTTaGAAGTCCATTTCCCCAATC +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESYHYL*KSISPI
Trigger: GATTGGGGAAATGGACTTTCAAAGGTAATGGTAACT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATGGGTGATGCTAAATTaGATCACTTGGTTATTGTGG +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEWVMLN*ITWLLW
Trigger: CCACAATAACCAAGTGATTCAATTTAGCATCACCCA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAATGACACTGACTTTTTaGGAAGCCCAAGTCAATCAT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEMTLTF*EAQVNH
Trigger: ATGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCAT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAGAACGGTAAAGTATTaGTATTTGTTGCAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAERTVKY*YLLQLG
Trigger: ACCCAGCTGCAACAAATATCAATACTTTACCGTTCT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTATTCTTCTTTTGATGTaGATTATGGTTGTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: VANSSWFCPLIVQALLVFILLLM*IMVVPC
Trigger: ACAGGGAACAACCATAATGCACATCAAAAGAAGAAT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTCACTTCTAGCCCTGTaGTCAGCAGAAAGCCATCTT +
Preference number: 2 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLSLLAL*SAESHL
Trigger: AAGATGGCTTTCTGCTGAGCACAGGGCTAGAAGTGA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAGTATTGATATTTGTTaGAGCTGGGTGATGGGTAGA +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESIDIC*SWVMGR
Trigger: TCTACCCATCACCCAGCTGCAACAAATATCAATACT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTCCAGACTTCCTGGGTaGTCTCCTCTCTACTCATCT +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLSRLPG*SPLYSS
Trigger: AGATGAGTAGAGAGGAGACCACCCAGGAAGTCTGGA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CAA 90 bp TTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTaGGAGGTAATCTTTGATGCTTACCTTTCCTTAATCCCCACATCC +
Preference number: 2 (lower is better)
Translates to: LLEWHQNPATNLLTN*EVIFDAYLSLIPTS
Trigger: GGATGTGGGGATTAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CAA 90 bp TCACAGCAGTGCACTCACTACTTTCTGGTATACAAGAAGAACAGCTaGTCCCCACTCTTACAGTGTAATGAAATTAGCAGTATAATGAAG +
Preference number: 2 (lower is better)
Translates to: SQQCTHYFLVYKKNS*SPLLQCNEISSIMK
Trigger: CTTCATTATACTGCTAATTTCATTACACTGTAAGAGTGGGGACAAGCTGTTCTTCTTGTATACCAGAAAGTAGTGAGTGCACTGCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATCTGCATATATTTTCTaGAAACCTGCTTTGTTCGCT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESAYIF*KPALFA
Trigger: AGCGAACAAAGCAGGTTTTCAGAAAATATATGCAGA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTCTCATGTTGAAATTTaGTCCCAGTGTTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVSHVEI*SQCWRW
Trigger: CCACCTCCAACACTGGGATCAAATTTCAACATGAGA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTCTCATGTTGAAATTTaGTCCCAGTGTTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLSHVEI*SQCWRW
Trigger: CCACCTCCAACACTGGGATCAAATTTCAACATGAGA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTCTGTTTTTAGCTACTaGCTTACAGCACGGTTGTCT +
Preference number: 2 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPSVFSY*LTARLS
Trigger: AGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAAGTCTCAAAATCCTATaGTCAAGCCATCCTCCCCTT +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLSLKIL*SSHPPL
Trigger: AAGGGGAGGATGGCTTGAGCATAGGATTTTGAGACT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAATTTTGCCACATGTGTaGCCTCTTTCTCTCTCCATG +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLILPHV*PLSLSM
Trigger: CATGGAGAGAGAAAGAGGGCACACATGTGGCAAAAT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGGAAGAAGCAGATGCTaGTGCCATGTTTCTTGTACA +
Preference number: 2 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVGRSRC*CHVSCT
Trigger: TGTACAAGAAACATGGCACCAGCATCTGCTTCTTCC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGGGAAGAAGCAGATGCTaGTGCCATGTTTCTTGTACA +
Preference number: 2 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLGRSRC*CHVSCT
Trigger: TGTACAAGAAACATGGCACCAGCATCTGCTTCTTCC...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTATTTAAAAAGAGCCTaGCACCTTCTCCCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENYLKRA*HLLPRS
Trigger: AGAGCGAGGGAGAAGGTGCCAGGCTCTTTTTAAATA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAGTTACCATTACCTTTaGAAGTCCATTTCCCCAATC +
Preference number: 2 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLSYHYL*KSISPI
Trigger: GATTGGGGAAATGGACTTTCAAAGGTAATGGTAACT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTCTCATGTTGAAATTTaGTCCCAGTGTTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLSHVEI*SQCWRW
Trigger: CCACCTCCAACACTGGGATCAAATTTCAACATGAGA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGGCTGGGTCAACATGGTaGAATTCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLAGSTW*NSVSTK
Trigger: TTTAGTAGAGACGGAATTTCACCATGTTGACCCAGC...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAATCTCAAATTATGGTaGACACTCAGTGGGGACTGC +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLNLKLW*TLSGDC
Trigger: GCAGTCCCCACTGAGTGTTCACCATAATTTGAGATT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATTTGTTGCAGCTGGGTaGTGGGTAGAGTTTCATTAT +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLFVAAG*WVEFHY
Trigger: ATAATGAAACTCTACCCATCACCCAGCTGCAACAAA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAATTCTTCTTTTGATGTaGATTATGGTTGTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEILLLM*IMVVPC
Trigger: ACAGGGAACAACCATAATGCACATCAAAAGAAGAAT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTCTGTTTTTAGCTACTaGCTTACAGCACGGTTGTCT +
Preference number: 2 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSVFSY*LTARLS
Trigger: AGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTCTGTTTTTAGCTACTaGCTTACAGCACGGTTGTCT +
Preference number: 2 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVSVFSY*LTARLS
Trigger: AGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATCTTGCTTCCTCTCTTaGCATATGATCTCTGCACAT +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLSCFLS*HMISAH
Trigger: ATGTGCAGAGATCATATGGCAAGAGAGGAAGCAAGA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTCTTGCTTCCTCTCTTaGCATATGATCTCTGCACAT +
Preference number: 2 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSCFLS*HMISAH
Trigger: ATGTGCAGAGATCATATGGCAAGAGAGGAAGCAAGA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGATTTTGCCACATGTGTaGCCTCTTTCTCTCTCCATG +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLILPHV*PLSLSM
Trigger: CATGGAGAGAGAAAGAGGGCACACATGTGGCAAAAT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGACACATCAACCAAATaGAATGTTGGATCTAGATTT +
Preference number: 2 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEDTSTK*NVGSRF
Trigger: AAATCTAGATCCAACATTGCATTTGGTTGATGTGTC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCACAAATTATGTAGCTaGCCATACACACACATGCAC +
Preference number: 2 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENHKLCS*PYTHMH
Trigger: GTGCATGTGTGTGTATGGCCAGCTACATAATTTGTG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGATGGTGAACACTCAGTaGGGACTGCATATTGTGAGT +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLMVNTQ*GLHIVS
Trigger: ACTCACAATATGCAGTCCCCACTGAGTGTTCACCAT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAATTAGTTGGGTGTGTTaGTGTATGCATGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLISWVC*CMHVVP
Trigger: TGGGACTACATGCATACACCAACACACCCAACTAAT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTCTGCATATATTTTCTaGAAACCTGCTTTGTTCGCT +
Preference number: 2 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLSAYIF*KPALFA
Trigger: AGCGAACAAAGCAGGTTTTCAGAAAATATATGCAGA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATGGGTGATGCTAAATTaGATCACTTGGTTATTGTGG +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLWVMLN*ITWLLW
Trigger: CCACAATAACCAAGTGATTCAATTTAGCATCACCCA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACATGACACTGACTTTTTaGGAAGCCCAAGTCAATCAT +
Preference number: 2 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENMTLTF*EAQVNH
Trigger: ATGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCAT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGGGGGACTGCATATTGTaGGTTATGTCTCTAGTTAGT +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLGDCIL*VMSLVS
Trigger: ACTAACTAGAGACATAACTCACAATATGCAGTCCCC...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAAGAACGGTAAAGTATTaGTATTTGTTGCAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLRTVKY*YLLQLG
Trigger: ACCCAGCTGCAACAAATATCAATACTTTACCGTTCT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTCTGTTTTTAGCTACTaGCTTACAGCACGGTTGTCT +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLSVFSY*LTARLS
Trigger: AGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAATGGTAGCTGGTTGCTaGTATAGTTTGCATGTTTGT +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLMVAGC*YSLHVC
Trigger: ACAAACATGCAAACTATAGCAGCAACCAGCTACCAT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCAGATAGTAGAGACCTaGAAAAGCTTGTATGTAGCC +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLQIVET*KSLYVA
Trigger: GGCTACATACAAGCTTTTCCAGGTCTCTACTATCTG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTCTGCATATATTTTCTaGAAACCTGCTTTGTTCGCT +
Preference number: 2 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLSAYIF*KPALFA
Trigger: AGCGAACAAAGCAGGTTTTCAGAAAATATATGCAGA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTCTGCATATATTTTCTaGAAACCTGCTTTGTTCGCT +
Preference number: 2 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVSAYIF*KPALFA
Trigger: AGCGAACAAAGCAGGTTTTCAGAAAATATATGCAGA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATCTGCATATATTTTCTaGAAACCTGCTTTGTTCGCT +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLSAYIF*KPALFA
Trigger: AGCGAACAAAGCAGGTTTTCAGAAAATATATGCAGA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATTTCCCCTGTATAATTaGTACCTCTTCTGTAGGATT +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLFPLYN*YLFCRI
Trigger: AATCCTACAGAAGAGGTATCAATTATACAGGGGAAA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTTTCCCCTGTATAATTaGTACCTCTTCTGTAGGATT +
Preference number: 2 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENFPLYN*YLFCRI
Trigger: AATCCTACAGAAGAGGTATCAATTATACAGGGGAAA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAGAACGGTAAAGTATTaGTATTTGTTGCAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLRTVKY*YLLQLG
Trigger: ACCCAGCTGCAACAAATATCAATACTTTACCGTTCT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAACATCATGTTCCTCCTaGAATGATGTAAGAGAAAGT +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLTSCSS*NDVRES
Trigger: ACTTTCTCTTACATCATTTCAGGAGGAACATGATGT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGGTTGCTGCTATAGTTTaGATGTTTGTCCCCCAAAAT +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLVAAIV*MFVPQN
Trigger: ATTTTGGGGGACAAACATGCAAACTATAGCAGCAAC...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCTGAACATTGAAAGTTaGAGACATCATGACACACTT +
Preference number: 2 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENLNIES*RHHDTL
Trigger: AAGTGTGTCATGATGTCTGCAACTTTCAATGTTCAG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCAATGGCTAATATTTTaGCACATGTGTGCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLQWLIF*HMCALF
Trigger: AAAGAGGGCACACATGTGGCAAAATATTAGCCATTG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAGTATTGATATTTGTTaGAGCTGGGTGATGGGTAGA +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLSIDIC*SWVMGR
Trigger: TCTACCCATCACCCAGCTGCAACAAATATCAATACT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAAAATTAACCTGGAGTaGTGGCAGATACCTGTAATC +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLKINLE*WQIPVI
Trigger: GATTACAGGTATCTGCCACCACTCCAGGTTAATTTT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCTAGTTTCAAAGTATTaGTTGGGCCATACCTTGCTT +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLVSKY*LGHTLL
Trigger: AAGCAAGGTATGGCCCAACCAATACTTTGAAACTAG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTATTCTTCTTTTGATGTaGATTATGGTTGTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVILLLM*IMVVPC
Trigger: ACAGGGAACAACCATAATGCACATCAAAAGAAGAAT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGATTCTTCTTTTGATGTaGATTATGGTTGTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLILLLM*IMVVPC
Trigger: ACAGGGAACAACCATAATGCACATCAAAAGAAGAAT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCTGAACATTGAAAGTTaGAGACATCATGACACACTT +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLNIES*RHHDTL
Trigger: AAGTGTGTCATGATGTCTGCAACTTTCAATGTTCAG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAAACTTTGTAGTAGTTaGTACCACCAGAACTCATTG +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLKLCSS*YHQNSL
Trigger: CAATGAGTTCTGGTGGTACCAACTACTACAAAGTTT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATTTCAAAGTATTGGTTaGGCCATACCTTGCTTTAAA +
Preference number: 2 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLFQSIG*AIPCFK
Trigger: TTTAAAGCAAGGTATGGCCCAACCAATACTTTGAAA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGATTCTTCTTTTGATGTaGATTATGGTTGTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLILLLM*IMVVPC
Trigger: ACAGGGAACAACCATAATGCACATCAAAAGAAGAAT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCTCATGCCAGACCCCTaGTCCAGACTTCCTGGGTGG +
Preference number: 3 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCLMPDP*SRLPGW
Trigger: CCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR TCA 72 bp GCAGACCTGCATGGGTGGGGCTTACTCGGGAAACACTaGATATGGGATGCATCATGGAAGCCTCCAGAGGAG +
Preference number: 3 (lower is better)
Translates to: ADLHGWGLLGKH*IWDASWKPPEE
Trigger: CTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTCCCGAGTAAGCCCCACCCATGCAGGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 72 bp TGGGTGGGGCTTACTCGGGAAACACTGAATATGGGATaGATCATGGAAGCCTCCAGAGGAGCATGGCCTTGC +
Preference number: 3 (lower is better)
Translates to: WVGLTRETLNMG*IMEASRGAWPC
Trigger: GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTCCCGAGTAAGCCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 72 bp TCCACCATGAGTGGAAGCAGCCGGGGAAGAAGCAGATaGTGGTGCCATGTTTCTTGTACAGCCTGCAGAACT +
Preference number: 3 (lower is better)
Translates to: STMSGSSRGRSR*WCHVSCTACRT
Trigger: AGTTCTGCAGGCTGTACAAGAAACATGGCACCAGCATCTGCTTCTTCCCCGGCTGCTTCCACTCATGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 72 bp CTCGCTCTCTTGCTTCCTCTCTTGCCATATGATCTCTaGACATCCGGCTCCCCTTCACCTTCCACCATGAGT +
Preference number: 3 (lower is better)
Translates to: LALLLPLLPYDL*TSGSPSPSTMS
Trigger: ACTCATGGTGGAAGGTGAAGGGGAGCCGGATGTGCAGAGATCATATGGCAAGAGAGGAAGCAAGAGAGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp GAGCTCATGCCAGACCCCTTGTCCAGACTTCCTGGGTaGTCTCCTCTCTACTCATCTAACACCCTGGCATAT +
Preference number: 3 (lower is better)
Translates to: ELMPDPLSRLPG*SPLYSSNTLAY
Trigger: ATATGCCAGGGTGTTAGATGAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp AATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATaGCCTTGCCCAGTGAACTGCAGCCCAGTGAATCTC +
Preference number: 3 (lower is better)
Translates to: NMGCIMEASRGA*PCPVNCSPVNL
Trigger: GAGATTCACTGGGCTGCAGTTCACTGGGCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 72 bp CCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATaGCAGACCCCTTGTCCAGACTTCCTGGGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: PHVPQIYLLQSS*QTPCPDFLGGL
Trigger: GAGACCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 72 bp GGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTaGCCAGTGAACTGCAGCCCAGTGAATCTCATTTTA +
Preference number: 3 (lower is better)
Translates to: GCIMEASRGAWP*PVNCSPVNLIL
Trigger: TAAAATGAGATTCACTGGGCTGCAGTTCACTGGGCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp TCTCCTCTCTACTCATCTAACACCCTGGCATATAGTTaGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGTG +
Preference number: 3 (lower is better)
Translates to: SPLYSSNTLAYS*KAHWAVTSSPV
Trigger: CACAGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGATGAGTAGAGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp TTCCTGGGTGGTCTCCTCTCTACTCATCTAACACCCTaGCATATAGTTGGAAGGCCCACTGGGCTGTCACTT +
Preference number: 3 (lower is better)
Translates to: FLGGLLSTHLTP*HIVGRPTGLSL
Trigger: AAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGATGAGTAGAGAGGAGACCACCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp ACCATGAGTGGAAGCAGCCGGGGAAGAAGCAGATGCTaGTGCCATGTTTCTTGTACAGCCTGCAGAACTGTA +
Preference number: 3 (lower is better)
Translates to: TMSGSSRGRSRC*CHVSCTACRTV
Trigger: TACAGTTCTGCAGGCTGTACAAGAAACATGGCACCAGCATCTGCTTCTTCCCCGGCTGCTTCCACTCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACTCATGCCAGACCCCTaGTCCAGACTTCCTGGGTGG +
Preference number: 3 (lower is better)
Translates to: TLSQILSGGNSTGQIKAELMPDP*SRLPGW
Trigger: CCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACCTGATGGGAGGTGTTaGGGTCATGGGGGAAGACCC +
Preference number: 3 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEPDGRC*GHGGRP
Trigger: GGGTCTTCCCCCATGACCCAAACACCTCCCATCAGG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAATTTGATCCCAGTGTaGGAGGTGGGGCCTGATGGG +
Preference number: 3 (lower is better)
Translates to: VANSSWFCPLIVQALLVFNLIPV*EVGPDG
Trigger: CCCATCAGGCCCCACCTCCAACACTGGGATCAAATT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp GTGTTCTGGCAGCACCTCAAGCTCACTGTCACCAAATaGGATTCAACGTCTTTCCTCCCAAACATGCTCTAC +
Preference number: 3 (lower is better)
Translates to: VFWQHLKLTVTK*DSTSFLPNMLY
Trigger: GTAGAGCATGTTTGGGAGGAAAGACGTTGAATCCCATTTGGTGACAGTGAGCTTGAGGTGCTGCCAGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCCTTCCTTCCCATTATaGTCTCATCACATTTGTTGG +
Preference number: 3 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPPSFPL*SHHICW
Trigger: CCAACAAATGTGATGAGACAATAATGGGAAGGAAGG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTTGCCTTACAGCACGGTaGTCTTTAAAGTGGTTGTTA +
Preference number: 3 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPCLTAR*SLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCA...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAACAATTGCCCTAAGTaGAAATTCACCCTCAGGGTC +
Preference number: 3 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYNNCPK*KFTLRV
Trigger: GACCCTGAGGGTGAATTTCAACTTAGGGCAATTGTT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACGCTAGTTTCAAAGTATaGGTTGGGCCATACCTTGCT +
Preference number: 3 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYASFKV*VGPYLA
Trigger: AGCAAGGTATGGCCCAACCAATACTTTGAAACTAGC...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCCTTCCTTCCCATTATaGTCTCATCACATTTGTTGG +
Preference number: 3 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYPSFPL*SHHICW
Trigger: CCAACAAATGTGATGAGACAATAATGGGAAGGAAGG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTGCCTTACAGCACGGTaGTCTTTAAAGTGGTTGTTA +
Preference number: 3 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCCLTAR*SLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTTCTCCCTCGCTCTCTaGCTTCCTCTCTTGCCATAT +
Preference number: 3 (lower is better)
Translates to: VANSSWFCPLIVQALLVFFSLAL*LPLLPY
Trigger: ATATGGCAAGAGAGGAAGCAAGAGAGCGAGGGAGAA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTTAGGGTGTTCCACCTaGGGTGATGCTAAATTGAAT +
Preference number: 3 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYLGCST*GDAKLN
Trigger: ATTCAATTTAGCATCACCCAAGGTGGAACACCCTAA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCATGACACTGACTTTTaGAGAAGCCCAAGTCAATCA +
Preference number: 3 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYHDTDF*RSPSQS
Trigger: TGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCATG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCTCATGCCAGACCCCTaGTCCAGACTTCCTGGGTGG +
Preference number: 3 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENLMPDP*SRLPGW
Trigger: CCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCTCATGCCAGACCCCTaGTCCAGACTTCCTGGGTGG +
Preference number: 3 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVLMPDP*SRLPGW
Trigger: CCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCCTGATGGGAGGTGTTaGGGTCATGGGGGAAGACCC +
Preference number: 3 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENPDGRC*GHGGRP
Trigger: GGGTCTTCCCCCATGACCCAAACACCTCCCATCAGG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCCTGATGGGAGGTGTTaGGGTCATGGGGGAAGACCC +
Preference number: 3 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVPDGRC*GHGGRP
Trigger: GGGTCTTCCCCCATGACCCAAACACCTCCCATCAGG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACCTGATGGGAGGTGTTaGGGTCATGGGGGAAGACCC +
Preference number: 3 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLPDGRC*GHGGRP
Trigger: GGGTCTTCCCCCATGACCCAAACACCTCCCATCAGG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCCCCAAAATCTCATGTaGAAATTTGATCCCAGTGTT +
Preference number: 3 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYPQNLM*KFDPSV
Trigger: AACACTGGGATCAAATTTCAACATGAGATTTTGGGG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCCCCAAAATCTCATGTaGAAATTTGATCCCAGTGTT +
Preference number: 3 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCPQNLM*KFDPSV
Trigger: AACACTGGGATCAAATTTCAACATGAGATTTTGGGG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAGCCATCCTCCCCTTTaGACCTCCCAAAAATGCTGG +
Preference number: 3 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESHPPL*TSQKCW
Trigger: CCAGCATTTTTGGGAGGTCAAAAGGGGAGGATGGCT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTTGGCCTCTAAATGTTaGTGCATGCATTGCCTAAAA +
Preference number: 3 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCLASKC*CMHCLK
Trigger: TTTTAGGCAATGCATGCACAAACATTTAGAGGCCAA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCGAGACTTGTATTTACTaGAATGGCATCAGAATCCTG +
Preference number: 3 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCETCIY*NGIRIL
Trigger: CAGGATTCTGATGCCATTCAAGTAAATACAAGTCTC...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 72 bp ACATATGTGCACACACACAGGATGGCTTCATGGACATaGAACCTGTGCAGTTGCACAAGACTGTGCTTAGAA +
Preference number: 3 (lower is better)
Translates to: TYVHTHRMASWT*NLCSCTRLCLE
Trigger: TTCTAAGCACAGTCTTGTGCAACTGCACAGGTTGCATGTCCATGAAGCCATCCTGTGTGTGTGCACATATGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp GGATCAAATCCAGCTTCTAGGTCTAACTGGACACTCTaGGGATACTCTCAGTCAAATCCTGAGTGGAGGAAA +
Preference number: 3 (lower is better)
Translates to: GSNPASRSNWTL*GYSQSNPEWRK
Trigger: TTTCCTCCACTCAGGATTTGACTGAGAGTATCCCCAGAGTGTCCAGTTAGACCTAGAAGCTGGATTTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAAGTTACCATTACCTTaGAAAGTCCATTTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCKLPLP*KVHFPN
Trigger: ATTGGGGAAATGGACTTTCAAAGGTAATGGTAACTT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAACAATTGCCCTAAGTaGAAATTCACCCTCAGGGTC +
Preference number: 3 (lower is better)
Translates to: VANSSWFCPLIVQALLVFNNCPK*KFTLRV
Trigger: GACCCTGAGGGTGAATTTCAACTTAGGGCAATTGTT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCCATCAGGTGAAAGATaGATGAGAAACTTTGTAGTA +
Preference number: 3 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCPSGER*MRNFVV
Trigger: TACTACAAAGTTTCTCATCAATCTTTCACCTGATGG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp CTTAATCCCCACATCCAATTAGTTGCCAACTCCTCTTaGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTC +
Preference number: 3 (lower is better)
Translates to: LNPHIQLVANSS*FCPLIVQALLV
Trigger: GACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAACTAATTGGATGTGGGGATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp TCCTGCTTTCTTCACAGCAGTGCACTCACTACTTTCTaGTATACAAGAAGAACAGCTTGTCCCCACTCTTAC +
Preference number: 3 (lower is better)
Translates to: SCFLHSSALTTF*YTRRTACPHSY
Trigger: GTAAGAGTGGGGACAAGCTGTTCTTCTTGTATACCAGAAAGTAGTGAGTGCACTGCTGTGAAGAAAGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCCTTCCTTCCCATTATaGTCTCATCACATTTGTTGG +
Preference number: 3 (lower is better)
Translates to: VANSSWFCPLIVQALLVFPSFPL*SHHICW
Trigger: CCAACAAATGTGATGAGACAATAATGGGAAGGAAGG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAATTTGATCCCAGTGTaGGAGGTGGGGCCTGATGGG +
Preference number: 3 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVNLIPV*EVGPDG
Trigger: CCCATCAGGCCCCACCTCCAACACTGGGATCAAATT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp TGGACACTCTGGGGATACTCTCAGTCAAATCCTGAGTaGAGGAAATTCCACAGGACAAATAAAAGCCGAAAA +
Preference number: 3 (lower is better)
Translates to: WTLWGYSQSNPE*RKFHRTNKSRK
Trigger: TTTTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGTATCCCCAGAGTGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp ATCACAGATCAGAAACTGCAGACATTGAGGCCTGGATaGCCGTTTAGAGAGAAAGAGTTAACATTTCAGTGG +
Preference number: 3 (lower is better)
Translates to: ITDQKLQTLRPG*PFREKELTFQW
Trigger: CCACTGAAATGTTAACTCTTTCTCTCTAAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCTGATCTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAGGCAGGAGAATCACTaGAACCCAAGAGGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLRQENH*NPRGRS
Trigger: ACTTCTGCCTCTTGGGTTCAAGTGATTCTCCTGCCT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCAGGCAGGAGAATCACTaGAACCCAAGAGGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLRQENH*NPRGRS
Trigger: ACTTCTGCCTCTTGGGTTCAAGTGATTCTCCTGCCT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCCTTCCTTCCCATTATaGTCTCATCACATTTGTTGG +
Preference number: 3 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQPSFPL*SHHICW
Trigger: CCAACAAATGTGATGAGACAATAATGGGAAGGAAGG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGGTTGCTGCTATAGTTaGCATGTTTGTCCCCCAAAA +
Preference number: 3 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEGCCYS*HVCPPK
Trigger: TTTTGGGGGACAAACATGCAAACTATAGCAGCAACC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAGCCATCCTCCCCTTTaGACCTCCCAAAAATGCTGG +
Preference number: 3 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSHPPL*TSQKCW
Trigger: CCAGCATTTTTGGGAGGTCAAAAGGGGAGGATGGCT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR TCA 72 bp CCCTCAAATACATGTGGCTCTTGGGGTTCATCTGACTaGGACTTGTATTTACTTGAATGGCATCAGAATCCT +
Preference number: 3 (lower is better)
Translates to: PSNTCGSWGSSD*DLYLLEWHQNP
Trigger: AGGATTCTGATGCCATTCAAGTAAATACAAGTCTCAGTCAGATGAACCCCAAGAGCCACATGTATTTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAGGCAGGAGAATCACTaGAACCCAAGAGGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLRQENH*NPRGRS
Trigger: ACTTCTGCCTCTTGGGTTCAAGTGATTCTCCTGCCT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAGGCAGGAGAATCACTaGAACCCAAGAGGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVRQENH*NPRGRS
Trigger: ACTTCTGCCTCTTGGGTTCAAGTGATTCTCCTGCCT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATGCCTTACAGCACGGTaGTCTTTAAAGTGGTTGTTA +
Preference number: 3 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARCLTAR*SLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATGCCTTACAGCACGGTaGTCTTTAAAGTGGTTGTTA +
Preference number: 3 (lower is better)
Translates to: TLSQILSGGNSTGQIKAECLTAR*SLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTTGGGTGATGCTAAATaGAATCACTTGGTTATTGTG +
Preference number: 3 (lower is better)
Translates to: VANSSWFCPLIVQALLVFLGDAK*NHLVIV
Trigger: CACAATAACCAAGTGATTCAATTTAGCATCACCCAA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 72 bp ACCCTTCCCGATGGACTATTTTCTGTTTTTAGCTACTaGCTTACAGCACGGTTGTCTTTAAAGTGGTTGTTA +
Preference number: 3 (lower is better)
Translates to: TLPDGLFSVFSY*LTARLSLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGAAAATAGTCCATCGGGAAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTAGGCAGGAGAATCACTaGAACCCAAGAGGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFRQENH*NPRGRS
Trigger: ACTTCTGCCTCTTGGGTTCAAGTGATTCTCCTGCCT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCCTTCCTTCCCATTATaGTCTCATCACATTTGTTGG +
Preference number: 3 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPPSFPL*SHHICW
Trigger: CCAACAAATGTGATGAGACAATAATGGGAAGGAAGG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAAGTTACCATTACCTTaGAAAGTCCATTTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARKLPLP*KVHFPN
Trigger: ATTGGGGAAATGGACTTTCAAAGGTAATGGTAACTT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTGCCTTACAGCACGGTaGTCTTTAAAGTGGTTGTTA +
Preference number: 3 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLCLTAR*SLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAGGTTGCTGCTATAGTTaGCATGTTTGTCCCCCAAAA +
Preference number: 3 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLGCCYS*HVCPPK
Trigger: TTTTGGGGGACAAACATGCAAACTATAGCAGCAACC...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAGCTAGTTTCAAAGTATaGGTTGGGCCATACCTTGCT +
Preference number: 3 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLASFKV*VGPYLA
Trigger: AGCAAGGTATGGCCCAACCAATACTTTGAAACTAGC...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 72 bp AGAAGCAGATGCTGGTGCCATGTTTCTTGTACAGCCTaGAGAACTGTAAGTCATATAAATCTCTTTTCCTTA +
Preference number: 3 (lower is better)
Translates to: RSRCWCHVSCTA*RTVSHINLFSL
Trigger: TAAGGAAAAGAGATTTATATGACTTACAGTTCTGCAGGCTGTACAAGAAACATGGCACCAGCATCTGCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 72 bp TTCTTAACTTTTGAGTTCCTGCTTTCTTCACAGCAGTaGACTCACTACTTTCTGGTATACAAGAAGAACAGC +
Preference number: 3 (lower is better)
Translates to: FLTFEFLLSSQQ*THYFLVYKKNS
Trigger: GCTGTTCTTCTTGTATACCAGAAAGTAGTGAGTGCACTGCTGTGAAGAAAGCAGGAACTCAAAAGTTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp CCTGTGTACTGTCATCTAGATTTACCAATTGTACAATaGCTAATATTTTGCCACATGTGTGCCCTCTTTCTC +
Preference number: 3 (lower is better)
Translates to: PVYCHLDLPIVQ*LIFCHMCALFL
Trigger: GAGAAAGAGGGCACACATGTGGCAAAATATTAGCCATTGTACAATTGGTAAATCTAGATGACAGTACACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACCTTCCTTCCCATTATaGTCTCATCACATTTGTTGG +
Preference number: 3 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLPSFPL*SHHICW
Trigger: CCAACAAATGTGATGAGACAATAATGGGAAGGAAGG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCCTTCCTTCCCATTATaGTCTCATCACATTTGTTGG +
Preference number: 3 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLPSFPL*SHHICW
Trigger: CCAACAAATGTGATGAGACAATAATGGGAAGGAAGG...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATGCCTTACAGCACGGTaGTCTTTAAAGTGGTTGTTA +
Preference number: 3 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLCLTAR*SLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTGCCTTACAGCACGGTaGTCTTTAAAGTGGTTGTTA +
Preference number: 3 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVCLTAR*SLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCATGACACTGACTTTTaGAGAAGCCCAAGTCAATCA +
Preference number: 3 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENHDTDF*RSPSQS
Trigger: TGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCATG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACATGACACTGACTTTTaGAGAAGCCCAAGTCAATCA +
Preference number: 3 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLHDTDF*RSPSQS
Trigger: TGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCATG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR TCA 72 bp AAAGTGGAACAATCAGACATCATGTTCCTCCTGAAATaGTGTAAGAGAAAGTGTATAGCATCACCTATGGAG +
Preference number: 3 (lower is better)
Translates to: KVEQSDIMFLLK*CKRKCIASPME
Trigger: CTCCATAGGTGATGCTATACACTTTCTCTTACATCATTTCAGGAGGAACATGATGTCTGATTGTTCCACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR GCA 72 bp ACCAATTGTACAATGGCTAATATTTTGCCACATGTGTaGCCTCTTTCTCTCTCCATGTTGATTTTTGCTGAA +
Preference number: 3 (lower is better)
Translates to: TNCTMANILPHV*PLSLSMLIFAE
Trigger: TTCAGCAAAAATCAACATGGAGAGAGAAAGAGGGCACACATGTGGCAAAATATTAGCCATTGTACAATTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAAGTTACCATTACCTTaGAAAGTCCATTTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLKLPLP*KVHFPN
Trigger: ATTGGGGAAATGGACTTTCAAAGGTAATGGTAACTT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTAAGTTACCATTACCTTaGAAAGTCCATTTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPKLPLP*KVHFPN
Trigger: ATTGGGGAAATGGACTTTCAAAGGTAATGGTAACTT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTTGGCCTCTAAATGTTaGTGCATGCATTGCCTAAAA +
Preference number: 3 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENLASKC*CMHCLK
Trigger: TTTTAGGCAATGCATGCACAAACATTTAGAGGCCAA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAAGTTACCATTACCTTaGAAAGTCCATTTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVKLPLP*KVHFPN
Trigger: ATTGGGGAAATGGACTTTCAAAGGTAATGGTAACTT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTTGGGTGATGCTAAATaGAATCACTTGGTTATTGTG +
Preference number: 3 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENLGDAK*NHLVIV
Trigger: CACAATAACCAAGTGATTCAATTTAGCATCACCCAA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATTGGGTGATGCTAAATaGAATCACTTGGTTATTGTG +
Preference number: 3 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLLGDAK*NHLVIV
Trigger: CACAATAACCAAGTGATTCAATTTAGCATCACCCAA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTTGGCCTCTAAATGTTaGTGCATGCATTGCCTAAAA +
Preference number: 3 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLASKC*CMHCLK
Trigger: TTTTAGGCAATGCATGCACAAACATTTAGAGGCCAA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACCATCAGGTGAAAGATaGATGAGAAACTTTGTAGTA +
Preference number: 3 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLPSGER*MRNFVV
Trigger: TACTACAAAGTTTCTCATCAATCTTTCACCTGATGG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTTGGGTGATGCTAAATaGAATCACTTGGTTATTGTG +
Preference number: 3 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLGDAK*NHLVIV
Trigger: CACAATAACCAAGTGATTCAATTTAGCATCACCCAA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCAACCAAATGCAATGTaGGATCTAGATTTCAACAAC +
Preference number: 3 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLQPNAM*DLDFNN
Trigger: GTTGTTGAAATCTAGATCCAACATTGCATTTGGTTG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR TCA 72 bp AGGCAACAATTATCAATAGCTGCTAAAACCATCAGGTaGAAGATTGATGAGAAACTTTGTAGTAGTTGGTAC +
Preference number: 3 (lower is better)
Translates to: RQQLSIAAKTIR*KIDEKLCSSWY
Trigger: GTACCAACTACTACAAAGTTTCTCATCAATCTTTCACCTGATGGTTTTAGCAGCTATTGATAATTGTTGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CCA 72 bp GTAAGCACGTATGTAGGAATAGAATTGATAGCTATGTaGGTATACATGGATTCAACTTTACTAGATAATGCC +
Preference number: 3 (lower is better)
Translates to: VSTYVGIELIAM*VYMDSTLLDNA
Trigger: GGCATTATCTAGTAAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTGCTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCTCGGCCTCCCAGAGTaGTGGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPLGLPE*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCACTCTGGGAGGCCGAG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTAATCCTTCTGGCCCATaGACCCCCGATGCACACTGT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPNPSGP*TPDAHC
Trigger: ACAGTGTGCATCGGGGGTGCATGGGCCAGAAGGATT...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCTCGGCCTCCCAGAGTaGTGGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYLGLPE*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCACTCTGGGAGGCCGAG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTACCCTGGCATATAGTTaGAAGGCCCACTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPTLAYS*KAHWAV
Trigger: GACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGT...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTCCCAGTGTTGGAGGTaGGGCCTGATGGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCSQCWR*GLMGGV
Trigger: AACACCTCCCATCAGGCCCCACCTCCAACACTGGGA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTCCCAGTGTTGGAGGTaGGGCCTGATGGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSQCWR*GLMGGV
Trigger: AACACCTCCCATCAGGCCCCACCTCCAACACTGGGA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CAA 72 bp GGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTaGCCCAGTGAACTGCAGCCCAGTGAATCTCATTTT +
Preference number: 4 (lower is better)
Translates to: GMHHGSLQRSMA*PSELQPSESHF
Trigger: AAAATGAGATTCACTGGGCTGCAGTTCACTGGGCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCCAAGACTGTGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPPRLCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAGGCGTGAGCCACCATaGCCAGCCAGAGTAGGAATA +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYRREPP*PARVGI
Trigger: TATTCCTACTCTGGCTGGGCATGGTGGCTCACGCCT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGCACAAGCCCTCGTCTaGTACGGGATTGGGGTAAAT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPAQALV*YGIGVN
Trigger: ATTTACCCCAATCCCGTAGCAGACGAGGGCTTGTGC...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAGTTGGAAGGCCCACTaGGCTGTCACTTCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCSWKAH*AVTSSP
Trigger: AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAGTTGGAAGGCCCACTaGGCTGTCACTTCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSWKAH*AVTSSP
Trigger: AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCACCCTGGCATATAGTTaGAAGGCCCACTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCTLAYS*KAHWAV
Trigger: GACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAACTGCAGACCTGCATaGGTGGGGCTTACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCNCRPA*VGLTRE
Trigger: TTCCCGAGTAAGCCCCACCCATGCAGGTCTGCAGTT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAACTGCAGACCTGCATaGGTGGGGCTTACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYNCRPA*VGLTRE
Trigger: TTCCCGAGTAAGCCCCACCCATGCAGGTCTGCAGTT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCCAGAGAAGCAAACCTaGGTCAGATGGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPPEKQT*VRWKNC
Trigger: GCAGTTCTTCCATCTGACTCAGGTTTGCTTCTCTGG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679979.1
ENST00000680273.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCACAGGAGAGAGCCACTaGGTGCAAAAGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCTGESH*VQKPVE
Trigger: CTCAACAGGCTTTTGCACTCAGTGGCTCTCTCCTGT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCCAAGACTGTGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCPRLCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCCAAGACTGTGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYPRLCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCGTAAAACTGCAGACCTaGATGGGTGGGGCTTACTCG +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCVKLQT*MGGAYS
Trigger: CGAGTAAGCCCCACCCATGCAGGTCTGCAGTTTTAC...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGGCTTGGCACCCACGTaGTGCCCCTGCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLGLAPT*CPCTAR
Trigger: CCTGGCCGTGCAGGGGCAGCACGTGGGTGCCAAGCC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTATAATGAAATCCTTCTaGCCCATGCACCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPIMKSF*PMHPRC
Trigger: GCATCGGGGGTGCATGGGCCAGAAGGATTTCATTAT...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCCAGAGAAGCAAACCTaGGTCAGATGGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYPEKQT*VRWKNC
Trigger: GCAGTTCTTCCATCTGACTCAGGTTTGCTTCTCTGG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233057.9
ENST00000679979.1
ENST00000680273.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAGGCAGAAGTTGCAGTaGGCCAAGACTGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYRQKLQ*AKTVSL
Trigger: CAATGACACAGTCTTGGCTCACTGCAACTTCTGCCT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAGAAACTGCAGACATTaGGGCCTGGATGGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCRNCRH*GLDGRL
Trigger: TAAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTAAAGGAATGAGATGCTaGTTCATGCCACAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPKGMRC*FMPQLG
Trigger: TCCCAGCTGTGGCATGAATCAGCATCTCATTCCTTT...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTTCACCCAGGCTGGAATaGAGTAACATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPSPRLE*SNMIMA
Trigger: AGCCATGATCATGTTACTGCATTCCAGCCTGGGTGA...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCTTTCCTCCCAAACATaGTCTACCTCACCATGTCGA +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPLSSQT*STSPCR
Trigger: TCGACATGGTGAGGTAGAGCATGTTTGGGAGGAAAG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTGCGCTGGATCCAGAGTaGGCGCGAGAGGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPALDPE*AREALA
Trigger: CGCCAGTGCCTCTCGCGCGCACTCTGGATCCAGCGC...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTTCAGTGCAGTGTTCTaGCAGCACCTCAAGCTCACT +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYFSAVF*QHLKLT
Trigger: AGTGAGCTTGAGGTGCTGCCAGAACACTGCACTGAA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTACTACTCCCTGCTTCTaGCGGTATGTATTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPTTPCF*RYVLSS
Trigger: GGAACTTAATACATACCGTCAGAAGCAGGGAGTAGT...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCAAATATATCTGAGATaGTGCCATCCCGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPQIYLR*CHPVGL
Trigger: CAGACCTACGGGATGGCATCATCTCAGATATATTTG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTTTAGAACAAAGAGATaGGGCTGGGCGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFFRTKR*GWARWL
Trigger: GAGCCACCGCGCCCAGCCTCATCTCTTTGTTCTAAA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTTCTCATGTTGAAATTTaGTCCCAGTGTTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPSHVEI*SQCWRW
Trigger: CCACCTCCAACACTGGGATCAAATTTCAACATGAGA...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACGCCCCTGTCCTCCTCTaGGTAAGAGGATACTTTTTA +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYAPVLL*VRGYFL
Trigger: TAAAAAGTATCCTCTTACTCAGAGGAGGACAGGGGC...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCTCTCAGTCAAATCCTaGGTGGAGGAAATTCCACAG +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYLSVKS*VEEIPQ
Trigger: CTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAAAGGAATGAGATGCTaGTTCATGCCACAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCKGMRC*FMPQLG
Trigger: TCCCAGCTGTGGCATGAATCAGCATCTCATTCCTTT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTATTTTGCCACATGTGTaGCCTCTTTCTCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPILPHV*PLSLSM
Trigger: CATGGAGAGAGAAAGAGGGCACACATGTGGCAAAAT...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTTGGCACCCACGTGCTaGCCCTGCACGGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISLAPTC*PCTART
Trigger: GGTCCTGGCCGTGCAGGGGCAGCACGTGGGTGCCAA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTTATTTAAAAAGAGCCTaGCACCTTCTCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPYLKRA*HLLPRS
Trigger: AGAGCGAGGGAGAAGGTGCCAGGCTCTTTTTAAATA...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGTCCCAGTGTTGGAGGTaGGGCCTGATGGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQSQCWR*GLMGGV
Trigger: AACACCTCCCATCAGGCCCCACCTCCAACACTGGGA...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTATTAACCTGGAGTGGTaGCAGATACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPINLEW*QIPVIP
Trigger: TGGGATTACAGGTATCTGCCACCACTCCAGGTTAAT...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGGACTCCCGAGTAGCTaGGATTACAGGCGCCTACCA +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQGLPSS*DYRRLP
Trigger: TGGTAGGCGCCTGTAATCCCAGCTACTCGGGAGTCC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCGCTTCTAGGTCTAACTaGACACTCTGGGGATACTCT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCASRSN*TLWGYS
Trigger: AGAGTATCCCCAGAGTGTCCAGTTAGACCTAGAAGC...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCTCACTGTCACCAAATaGGATTCAACGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPLTVTK*DSTSFL
Trigger: GAGGAAAGACGTTGAATCCCATTTGGTGACAGTGAG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACATATGGGATGCATCATaGAAGCCTCCAGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYIWDAS*KPPEEH
Trigger: ATGCTCCTCTGGAGGCTTCCATGATGCATCCCATAT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCATATGGGATGCATCATaGAAGCCTCCAGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCIWDAS*KPPEEH
Trigger: ATGCTCCTCTGGAGGCTTCCATGATGCATCCCATAT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGACCGGCAGGCGGGCTTaGCACCCACGTGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLTGRRA*HPRAAP
Trigger: AGGGGCAGCACGTGGGTGCCAAGCCCGCCTGCCGGT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
3UTR CAA 72 bp TCAAATATATCTTCTCCAGAGCTCATGCCAGACCCCTaGTCCAGACTTCCTGGGTGGTCTCCTCTCTACTCA +
Preference number: 4 (lower is better)
Translates to: SNISSPELMPDP*SRLPGWSPLYS
Trigger: TGAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAGCTCTGGAGAAGATATATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCATGAAGAAACCTGCTaGAAGATCACCAGCCATTTC +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYHEETC*KITSHF
Trigger: GAAATGGCTGGTGATCTTTCAGCAGGTTTCTTCATG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACACTACTCCCTGCTTCTaGCGGTATGTATTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYTTPCF*RYVLSS
Trigger: GGAACTTAATACATACCGTCAGAAGCAGGGAGTAGT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCACTACTCCCTGCTTCTaGCGGTATGTATTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCTTPCF*RYVLSS
Trigger: GGAACTTAATACATACCGTCAGAAGCAGGGAGTAGT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTCTCATGTTGAAATTTaGTCCCAGTGTTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSHVEI*SQCWRW
Trigger: CCACCTCCAACACTGGGATCAAATTTCAACATGAGA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAATCTCAAATTATGGTaGACACTCAGTGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYNLKLW*TLSGDC
Trigger: GCAGTCCCCACTGAGTGTTCACCATAATTTGAGATT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTACAGGAGAGAGCCACTaGGTGCAAAAGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFTGESH*VQKPVE
Trigger: CTCAACAGGCTTTTGCACTCAGTGGCTCTCTCCTGT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTGTGAGAAAACAGAGTaGATACTAACGGGCATAGGG +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCCEKTE*ILTGIG
Trigger: CCCTATGCCCGTTAGTATTCACTCTGTTTTCTCACA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGGCAATAAAAAGGAATaGGATGCTGATTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPGNKKE*DADSCH
Trigger: GTGGCATGAATCAGCATCTCATTCCTTTTTATTGCC...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCTGTGTAGGAATGACTaGGCTCTAAGACAAACTGGT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCLCRND*ALRQTG
Trigger: ACCAGTTTGTCTTAGAGCTCAGTCATTCCTACACAG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCCAAGACTGTGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFPRLCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAGTCTCAAAATCCTATaGTCAAGCCATCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCSLKIL*SSHPPL
Trigger: AAGGGGAGGATGGCTTGAGCATAGGATTTTGAGACT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGTCACCCAGGCTGGAGTaGAATGGCGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQSPRLE*NGVISA
Trigger: AGCTGAGATCACGCCATTGCACTCCAGCCTGGGTGA...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCCACATCCAATTAGTTaGCAACTCCTCTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCPHPIS*QLLLVL
Trigger: CAGAACCAAGAGGAGTTGGCAACTAATTGGATGTGG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACTGATGGGAGGTGTTTaGGTCATGGGGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARLMGGV*VMGEDP
Trigger: GGGGTCTTCCCCCATGACCCAAACACCTCCCATCAG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGGACTCCCGAGTAGCTaGGATTACAGGCGCCTACCA +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEGLPSS*DYRRLP
Trigger: TGGTAGGCGCCTGTAATCCCAGCTACTCGGGAGTCC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCACAAATTATGTAGCTaGCCATACACACACATGCAC +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPHKLCS*PYTHMH
Trigger: GTGCATGTGTGTGTATGGCCAGCTACATAATTTGTG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGTTGCCAACTCCTCTTaGTTCTGTCCTCTTATTGTT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPVANSS*FCPLIV
Trigger: AACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGCAGACCTGCATGGGTaGGGCTTACTCGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARADLHG*GLLGKH
Trigger: GTGTTTCCCGAGTAAGCCCCACCCATGCAGGTCTGC...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGGGATTGGGGTAAATTaGCGCTGGATCCAGAGTGCG +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQGIGVN*RWIQSA
Trigger: CGCACTCTGGATCCAGCGCCAATTTACCCCAATCCC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACATCATGTGGAGGTCCTaGATTAGGCAGTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYIMWRS*IRQFLI
Trigger: TATCAAGAACTGCCTAATTCAGGACCTCCACATGAT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGCAGTGTCACATACATaGAGAAGTTCAGCAAGAATT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPAVSHT*RSSARI
Trigger: AATTCTTGCTGAACTTCTTCATGTATGTGACACTGC...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAGGCAGAAGTTGCAGTaGGCCAAGACTGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFRQKLQ*AKTVSL
Trigger: CAATGACACAGTCTTGGCTCACTGCAACTTCTGCCT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCCCAAAATCTCATGTTaGAATTTGATCCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPPKISC*NLIPVL
Trigger: CAACACTGGGATCAAATTTCAACATGAGATTTTGGG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTATGACACTGACTTTTTaGGAAGCCCAAGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPMTLTF*EAQVNH
Trigger: ATGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCAT...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAAGTTGCAGACATCATaGCACACTTGGCCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCKLQTS*HTWPLN
Trigger: ATTTAGAGGCCAAGTGTGTCATGATGTCTGCAACTT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTAGAACGGTAAAGTATTaGTATTTGTTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPRTVKY*YLLQLG
Trigger: ACCCAGCTGCAACAAATATCAATACTTTACCGTTCT...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAGAAACTGCAGACATTaGGGCCTGGATGGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFRNCRH*GLDGRL
Trigger: TAAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCGGCAATAAAAAGGAATaGGATGCTGATTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCGNKKE*DADSCH
Trigger: GTGGCATGAATCAGCATCTCATTCCTTTTTATTGCC...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCGGAAGTGTGGATGTTaGTTCTGCGCCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLRKCGC*FCAAAA
Trigger: GGCGGCGGCGGCGCAGAATCAACATCCACACTTCCG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681463.1
CDS-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAATCCTTCTGGCCCATaGACCCCCGATGCACACTGT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAENPSGP*TPDAHC
Trigger: ACAGTGTGCATCGGGGGTGCATGGGCCAGAAGGATT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAGCGGCCAATTGTTTTaGTTCCTGTTTAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCSGQLF*FLFSRT
Trigger: GGTTCTACTAAACAGGAAGCAAAACAATTGGCCGCT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCAGGATCATAATCACTaGTCTCAAGAGAATCATCAC +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPQDHNH*SQENHH
Trigger: GTGATGATTCTCTTGAGAGCAGTGATTATGATCCTG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCCAAGACTGTGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQPRLCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTCTGTTTTTAGCTACTaGCTTACAGCACGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCSVFSY*LTARLS
Trigger: AGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTCTGTTTTTAGCTACTaGCTTACAGCACGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSVFSY*LTARLS
Trigger: AGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTCTTGCTTCCTCTCTTaGCATATGATCTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSCFLS*HMISAH
Trigger: ATGTGCAGAGATCATATGGCAAGAGAGGAAGCAAGA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCACAGGCATTAGCTACTaGGTCCAGCTTTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCTGISY*VQLLSF
Trigger: AAAAGACAAAAGCTGGACGCAGTAGCTAATGCCTGT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGTAAAACTGCAGACCTaGATGGGTGGGGCTTACTCG +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQVKLQT*MGGAYS
Trigger: CGAGTAAGCCCCACCCATGCAGGTCTGCAGTTTTAC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTATAATGAAATCCTTCTaGCCCATGCACCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFIMKSF*PMHPRC
Trigger: GCATCGGGGGTGCATGGGCCAGAAGGATTTCATTAT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACACTAAAGAGTTGCTTTaGGACTCACACGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYTKELL*DSHVVA
Trigger: TGCTACTACGTGTGAGTCCCAAAGCAACTCTTTAGT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAGTTGGAAGGCCCACTaGGCTGTCACTTCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARSWKAH*AVTSSP
Trigger: AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAACCCTGGCATATAGTTaGAAGGCCCACTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARTLAYS*KAHWAV
Trigger: GACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCTTGTCCAGACTTCCTaGGTGGTCTCCTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQLVQTS*VVSSLL
Trigger: GAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTAAAATTAACCTGGAGTaGTGGCAGATACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPKINLE*WQIPVI
Trigger: GATTACAGGTATCTGCCACCACTCCAGGTTAATTTT...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCGAGTTCAAAACCAGCTaGGTCAACATGGTGAAATTC +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCEFKTS*VNMVKF
Trigger: GAATTTCACCATGTTGACCCAGCTGGTTTTGAACTC...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCACAGGATGGCTTCATaGACATGCAACCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFHRMAS*TCNLCS
Trigger: ACTGCACAGGTTGCATGTCCATGAAGCCATCCTGTG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCAGATAGTAGAGACCTaGAAAAGCTTGTATGTAGCC +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCQIVET*KSLYVA
Trigger: GGCTACATACAAGCTTTTCCAGGTCTCTACTATCTG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCGTTGCCAACTCCTCTTaGTTCTGTCCTCTTATTGTT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCVANSS*FCPLIV
Trigger: AACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCGGCTTCGGGAGAGCTaGTTCTCAGTTTCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQRLRES*FSVSFS
Trigger: GGAAAACGAAACTGAGAACCAGCTCTCCCGAAGCCG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395127.6
ENST00000679507.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGTCTGTGAAAAACTTTaGTGTTTCAAAAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPVCEKL*CFKSSV
Trigger: GACACTGCTTTTGAAACATCAAAGTTTTTCACAGAC...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCATCCCGTAGGTCTGTaGAAAACTTTGATGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYHPVGL*KTLMFQ
Trigger: TTGAAACATCAAAGTTTTTCACAGACCTACGGGATG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTTCTGCATATATTTTCTaGAAACCTGCTTTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPSAYIF*KPALFA
Trigger: AGCGAACAAAGCAGGTTTTCAGAAAATATATGCAGA...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAGTTACCATTACCTTTaGAAGTCCATTTCCCCAATC +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCSYHYL*KSISPI
Trigger: GATTGGGGAAATGGACTTTCAAAGGTAATGGTAACT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCCCAAAATCTCATGTTaGAATTTGATCCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYPKISC*NLIPVL
Trigger: CAACACTGGGATCAAATTTCAACATGAGATTTTGGG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACATGACACTGACTTTTTaGGAAGCCCAAGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYMTLTF*EAQVNH
Trigger: ATGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCAT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTTACAACCCCTGAAATaGAATAATGGATCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCLQPLK*NNGSRQ
Trigger: TTGCCTGGATCCATTATTTCATTTCAGGGGTTGTAA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCTTGGAGGTAATCTTTaGTGCTTACCTTTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPLGGNL*CLPFLN
Trigger: ATTAAGGAAAGGTAAGCATCAAAGATTACCTCCAAG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTGGGGTTCATCTGACTaGGACTTGTATTTACTTGAA +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCWGSSD*DLYLLE
Trigger: TTCAAGTAAATACAAGTCTCAGTCAGATGAACCCCA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAACAGGAGAGAGCCACTaGGTGCAAAAGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAETGESH*VQKPVE
Trigger: CTCAACAGGCTTTTGCACTCAGTGGCTCTCTCCTGT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCGGTTACCTAGAGTTGTaGGAAAACAGAGTGAATACT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCGYLEL*ENRVNT
Trigger: AGTATTCACTCTGTTTTCTCACAACTCTAGGTAACC...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCGCAAGTCACAAAGTATaGGCAAACTGCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLASHKV*ANCAAA
Trigger: GGCGGCGGCGCAGTTTGCTCATACTTTGTGACTTGC...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395127.6
CDS-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCCCATGCACCCCCGATaGACACTGTTCATAATTTAC +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFPMHPR*TLFIIY
Trigger: GTAAATTATGAACAGTGTGCATCGGGGGTGCATGGG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCAGGATCATAATCACTaGTCTCAAGAGAATCATCAC +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYQDHNH*SQENHH
Trigger: GTGATGATTCTCTTGAGAGCAGTGATTATGATCCTG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCATGGTAGCTGGTTGCTaGTATAGTTTGCATGTTTGT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCMVAGC*YSLHVC
Trigger: ACAAACATGCAAACTATAGCAGCAACCAGCTACCAT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCTGAACATTGAAAGTTaGAGACATCATGACACACTT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPLNIES*RHHDTL
Trigger: AAGTGTGTCATGATGTCTGCAACTTTCAATGTTCAG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCTCGGCCTCCCAGAGTaGTGGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLLGLPE*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCACTCTGGGAGGCCGAG...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCTCGGCCTCCCAGAGTaGTGGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPLGLPE*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCACTCTGGGAGGCCGAG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAGTATTGATATTTGTTaGAGCTGGGTGATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSIDIC*SWVMGR
Trigger: TCTACCCATCACCCAGCTGCAACAAATATCAATACT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCTTTCCTCCCAAACATaGTCTACCTCACCATGTCGA +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFLSSQT*STSPCR
Trigger: TCGACATGGTGAGGTAGAGCATGTTTGGGAGGAAAG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAGAGGAGCATGGCCTTaGCCAGTGAACTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLRGAWP*PVNCSP
Trigger: TGGGCTGCAGTTCACTGGGCAAGGCCATGCTCCTCT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTAGAGGAGCATGGCCTTaGCCAGTGAACTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPRGAWP*PVNCSP
Trigger: TGGGCTGCAGTTCACTGGGCAAGGCCATGCTCCTCT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACATAATCACGGAAGTGTaGATGTTGATTCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYIITEV*MLILKT
Trigger: GGTCTTCAGAATCAACATCCACACTTCCGTGATTAT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233057.9
ENST00000679979.1
ENST00000680273.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATAATGAAATCCTTCTaGCCCATGCACCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQIMKSF*PMHPRC
Trigger: GCATCGGGGGTGCATGGGCCAGAAGGATTTCATTAT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTTCACAGAATTCCATTTaGATGAAAAGGCACTTAGTC +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPSQNSI*MKRHLV
Trigger: GACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGA...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCTGATGGGAGGTGTTTaGGTCATGGGGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLLMGGV*VMGEDP
Trigger: GGGGTCTTCCCCCATGACCCAAACACCTCCCATCAG...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCTGATGGGAGGTGTTTaGGTCATGGGGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPLMGGV*VMGEDP
Trigger: GGGGTCTTCCCCCATGACCCAAACACCTCCCATCAG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTCCCAGTGTTGGAGGTaGGGCCTGATGGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPSQCWR*GLMGGV
Trigger: AACACCTCCCATCAGGCCCCACCTCCAACACTGGGA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAAAATTAACCTGGAGTaGTGGCAGATACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCKINLE*WQIPVI
Trigger: GATTACAGGTATCTGCCACCACTCCAGGTTAATTTT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTGCTTCTAGGTCTAACTaGACACTCTGGGGATACTCT +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFASRSN*TLWGYS
Trigger: AGAGTATCCCCAGAGTGTCCAGTTAGACCTAGAAGC...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCCTATGGAGTATTCTTaGGGGAAAATAAATGAACCA +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPPMEYS*GKINEP
Trigger: TGGTTCATTTATTTTCCCCCAAGAATACTCCATAGG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGTTCAGTGCAGTGTTCTaGCAGCACCTCAAGCTCACT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQFSAVF*QHLKLT
Trigger: AGTGAGCTTGAGGTGCTGCCAGAACACTGCACTGAA...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGAGTTAACATTTCAGTaGAGACCTTTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPELTFQ*RPFLSC
Trigger: ACAAGATAGGAAAGGTCTCCACTGAAATGTTAACTC...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTACATTGAGGCCTGGATaGCCGTTTAGAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFTLRPG*PFREKE
Trigger: CTCTTTCTCTCTAAACGGCCATCCAGGCCTCAATGT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGCAGACCTGCATGGGTaGGGCTTACTCGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLADLHG*GLLGKH
Trigger: GTGTTTCCCGAGTAAGCCCCACCCATGCAGGTCTGC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTGCAGACCTGCATGGGTaGGGCTTACTCGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPADLHG*GLLGKH
Trigger: GTGTTTCCCGAGTAAGCCCCACCCATGCAGGTCTGC...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCGCAGACCTGCATGGGTaGGGCTTACTCGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLADLHG*GLLGKH
Trigger: GTGTTTCCCGAGTAAGCCCCACCCATGCAGGTCTGC...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACGGCTTCGGGAGAGCTaGTTCTCAGTTTCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAERLRES*FSVSFS
Trigger: GGAAAACGAAACTGAGAACCAGCTCTCCCGAAGCCG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679507.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGGGGGTAAATTGGCGCTaGATCCAGAGTGCGCGCGAG +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLGVNWR*IQSARE
Trigger: CTCGCGCGCACTCTGGATCCAGCGCCAATTTACCCC...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681507.1
3UTR CAA 72 bp CAGCCGGGGAAGAAGCAGATGCTGGTGCCATGTTTCTaGTACAGCCTGCAGAACTGTAAGTCATATAAATCT +
Preference number: 4 (lower is better)
Translates to: QPGKKQMLVPCF*YSLQNCKSYKS
Trigger: AGATTTATATGACTTACAGTTCTGCAGGCTGTACAAGAAACATGGCACCAGCATCTGCTTCTTCCCCGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCGTCTGTGAAAAACTTTaGTGTTTCAAAAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCVCEKL*CFKSSV
Trigger: GACACTGCTTTTGAAACATCAAAGTTTTTCACAGAC...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAGGCAGAAGTTGCAGTaGGCCAAGACTGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARRQKLQ*AKTVSL
Trigger: CAATGACACAGTCTTGGCTCACTGCAACTTCTGCCT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAGAAACTGCAGACATTaGGGCCTGGATGGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAERNCRH*GLDGRL
Trigger: TAAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTTACTCGGGAAACACTaGATATGGGATGCATCATGG +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFLLGKH*IWDASW
Trigger: CCATGATGCATCCCATATTCAGTGTTTCCCGAGTAA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGTGCAAAAGCCTGTTaGGGTAAAACTGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQSAKAC*GKTADL
Trigger: CAGGTCTGCAGTTTTACCTCAACAGGCTTTTGCACT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTGTGAGAAAACAGAGTaGATACTAACGGGCATAGGG +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFCEKTE*ILTGIG
Trigger: CCCTATGCCCGTTAGTATTCACTCTGTTTTCTCACA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAAGGAATGAGATGCTaGTTCATGCCACAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQKGMRC*FMPQLG
Trigger: TCCCAGCTGTGGCATGAATCAGCATCTCATTCCTTT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAGTCTCAAAATCCTATaGTCAAGCCATCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFSLKIL*SSHPPL
Trigger: AAGGGGAGGATGGCTTGAGCATAGGATTTTGAGACT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCTGAACATTGAAAGTTaGAGACATCATGACACACTT +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYLNIES*RHHDTL
Trigger: AAGTGTGTCATGATGTCTGCAACTTTCAATGTTCAG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTCGGCCTCCCAGAGTaGTGGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISLGLPE*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCACTCTGGGAGGCCGAG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTCACCCAGGCTGGAGTaGAATGGCGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLSPRLE*NGVISA
Trigger: AGCTGAGATCACGCCATTGCACTCCAGCCTGGGTGA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGACACATCAACCAAATaGAATGTTGGATCTAGATTT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPDTSTK*NVGSRF
Trigger: AAATCTAGATCCAACATTGCATTTGGTTGATGTGTC...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGAGAAGCATTTTATTTaGCTCACAGTTTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPEKHFI*LTVLPI
Trigger: AATAGGCAAAACTGTGAGGCAAATAAAATGCTTCTC...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAGAGGAGCATGGCCTTaGCCAGTGAACTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVRGAWP*PVNCSP
Trigger: TGGGCTGCAGTTCACTGGGCAAGGCCATGCTCCTCT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTAGAGGAGCATGGCCTTaGCCAGTGAACTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISRGAWP*PVNCSP
Trigger: TGGGCTGCAGTTCACTGGGCAAGGCCATGCTCCTCT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAGAGGAGCATGGCCTTaGCCAGTGAACTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENRGAWP*PVNCSP
Trigger: TGGGCTGCAGTTCACTGGGCAAGGCCATGCTCCTCT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTACACTGAATATGGGATaGATCATGGAAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFTLNMG*IMEASR
Trigger: TCTGGAGGCTTCCATGATGCATCCCATATTCAGTGT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGTTAGTCTTTTCTTCTaGGCAATTCTATTGATAAGG +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPVSLFF*AILLIR
Trigger: CCTTATCAATAGAATTGCCCAGAAGAAAAGACTAAC...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAATAATGAAATCCTTCTaGCCCATGCACCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEIMKSF*PMHPRC
Trigger: GCATCGGGGGTGCATGGGCCAGAAGGATTTCATTAT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCAGAAGCGAGTGTGCTaGTCACTAAAGAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFQKRVC*SLKSCF
Trigger: AAAGCAACTCTTTAGTGACCAGCACACTCGCTTCTG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCAAGAGAATCATCACTaGTCTCAGGATCATAATCAA +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYQENHH*SQDHNQ
Trigger: TTGATTATGATCCTGAGACCAGTGATGATTCTCTTG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTCACAGAATTCCATTTaGATGAAAAGGCACTTAGTC +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCSQNSI*MKRHLV
Trigger: GACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATCCAGACTTCCTGGGTaGTCTCCTCTCTACTCATCT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESRLPG*SPLYSS
Trigger: AGATGAGTAGAGAGGAGACCACCCAGGAAGTCTGGA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTGGAAGAAGCAGATGCTaGTGCCATGTTTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFGRSRC*CHVSCT
Trigger: TGTACAAGAAACATGGCACCAGCATCTGCTTCTTCC...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCTGATGGGAGGTGTTTaGGTCATGGGGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENLMGGV*VMGEDP
Trigger: GGGGTCTTCCCCCATGACCCAAACACCTCCCATCAG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTCCCAGTGTTGGAGGTaGGGCCTGATGGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSQCWR*GLMGGV
Trigger: AACACCTCCCATCAGGCCCCACCTCCAACACTGGGA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGGGACTCCCGAGTAGCTaGGATTACAGGCGCCTACCA +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLGLPSS*DYRRLP
Trigger: TGGTAGGCGCCTGTAATCCCAGCTACTCGGGAGTCC...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCCTATGGAGTATTCTTaGGGGAAAATAAATGAACCA +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCPMEYS*GKINEP
Trigger: TGGTTCATTTATTTTCCCCCAAGAATACTCCATAGG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCGAGTTAACATTTCAGTaGAGACCTTTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCELTFQ*RPFLSC
Trigger: ACAAGATAGGAAAGGTCTCCACTGAAATGTTAACTC...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACATTGAGGCCTGGATaGCCGTTTAGAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQTLRPG*PFREKE
Trigger: CTCTTTCTCTCTAAACGGCCATCCAGGCCTCAATGT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAGCAGACCTGCATGGGTaGGGCTTACTCGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLADLHG*GLLGKH
Trigger: GTGTTTCCCGAGTAAGCCCCACCCATGCAGGTCTGC...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAACTGCAGACCTGCATaGGTGGGGCTTACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLNCRPA*VGLTRE
Trigger: TTCCCGAGTAAGCCCCACCCATGCAGGTCTGCAGTT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCCATCAGCTGATGAATaGATACATAAAATGCGACAT +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYPSADE*IHKMRH
Trigger: ATGTCGCATTTTATGTATCCATTCATCAGCTGATGG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCCATCAGCTGATGAATaGATACATAAAATGCGACAT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCPSADE*IHKMRH
Trigger: ATGTCGCATTTTATGTATCCATTCATCAGCTGATGG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTTGAGTGGGAGATGTTaGAACACTTTGGAAATAACA +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYLSGRC*NTLEIT
Trigger: TGTTATTTCCAAAGTGTTCCAACATCTCCCACTCAA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTAAGATTCATTTTGAGTaGGAGATGTTGGAACACTTT +
Preference number: 4 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPKIHFE*EMLEHF
Trigger: AAAGTGTTCCAACATCTCCCACTCAAAATGAATCTT...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACTACTCCCTGCTTCTaGCGGTATGTATTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQTTPCF*RYVLSS
Trigger: GGAACTTAATACATACCGTCAGAAGCAGGGAGTAGT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTTTAGAACAAAGAGATaGGGCTGGGCGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVFRTKR*GWARWL
Trigger: GAGCCACCGCGCCCAGCCTCATCTCTTTGTTCTAAA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGCCCCTGTCCTCCTCTaGGTAAGAGGATACTTTTTA +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEAPVLL*VRGYFL
Trigger: TAAAAAGTATCCTCTTACTCAGAGGAGGACAGGGGC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAATCTCAAATTATGGTaGACACTCAGTGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQNLKLW*TLSGDC
Trigger: GCAGTCCCCACTGAGTGTTCACCATAATTTGAGATT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAGTGCAAAAGCCTGTTaGGGTAAAACTGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESAKAC*GKTADL
Trigger: CAGGTCTGCAGTTTTACCTCAACAGGCTTTTGCACT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAGTGCAAAAGCCTGTTaGGGTAAAACTGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARSAKAC*GKTADL
Trigger: CAGGTCTGCAGTTTTACCTCAACAGGCTTTTGCACT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCACAGGAGAGAGCCACTaGGTGCAAAAGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLTGESH*VQKPVE
Trigger: CTCAACAGGCTTTTGCACTCAGTGGCTCTCTCCTGT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTGGCAATAAAAAGGAATaGGATGCTGATTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFGNKKE*DADSCH
Trigger: GTGGCATGAATCAGCATCTCATTCCTTTTTATTGCC...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACCCATGCACCCCCGATaGACACTGTTCATAATTTAC +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARPMHPR*TLFIIY
Trigger: GTAAATTATGAACAGTGTGCATCGGGGGTGCATGGG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAATCCTTCTGGCCCATaGACCCCCGATGCACACTGT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVNPSGP*TPDAHC
Trigger: ACAGTGTGCATCGGGGGTGCATGGGCCAGAAGGATT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATTCAGAAGCGAGTGTaGTGGTCACTAAAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQIQKRV*WSLKSC
Trigger: GCAACTCTTTAGTGACCAGCACACTCGCTTCTGAAT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTACATGATCAAGTTTTaGCAATGCTTTTACTTCACG +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYYMIKF*QCFYFT
Trigger: CGTGAAGTAAAAGCATTGGCAAAACTTGATCATGTA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACATTCTTCTTTTGATGTaGATTATGGTTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYILLLM*IMVVPC
Trigger: ACAGGGAACAACCATAATGCACATCAAAAGAAGAAT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAGGCGTGAGCCACCATaGCCAGCCAGAGTAGGAATA +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLRREPP*PARVGI
Trigger: TATTCCTACTCTGGCTGGGCATGGTGGCTCACGCCT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTAGGCGTGAGCCACCATaGCCAGCCAGAGTAGGAATA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISRREPP*PARVGI
Trigger: TATTCCTACTCTGGCTGGGCATGGTGGCTCACGCCT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTCACCCAGGCTGGAGTaGAATGGCGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSPRLE*NGVISA
Trigger: AGCTGAGATCACGCCATTGCACTCCAGCCTGGGTGA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTCACCCAGGCTGGAGTaGAATGGCGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLSPRLE*NGVISA
Trigger: AGCTGAGATCACGCCATTGCACTCCAGCCTGGGTGA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCCACATCCAATTAGTTaGCAACTCCTCTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQPHPIS*QLLLVL
Trigger: CAGAACCAAGAGGAGTTGGCAACTAATTGGATGTGG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACTTTCCTCCCAAACATaGTCTACCTCACCATGTCGA +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARLSSQT*STSPCR
Trigger: TCGACATGGTGAGGTAGAGCATGTTTGGGAGGAAAG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAGAGGAGCATGGCCTTaGCCAGTGAACTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLRGAWP*PVNCSP
Trigger: TGGGCTGCAGTTCACTGGGCAAGGCCATGCTCCTCT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGTAAAACTGCAGACCTaGATGGGTGGGGCTTACTCG +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLVKLQT*MGGAYS
Trigger: CGAGTAAGCCCCACCCATGCAGGTCTGCAGTTTTAC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTATGCCACAGCTGGGATaGACCTTGAAAATATACTCA +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFMPQLG*TLKIYS
Trigger: TGAGTATATTTTCAAGGTGCATCCCAGCTGTGGCAT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTATAATGAAGAAAAGTaGTGTGTAGGAATGACTGAG +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCYNEEK*CVGMTE
Trigger: CTCAGTCATTCCTACACAGCACTTTTCTTCATTATA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTATAATGAAGAAAAGTaGTGTGTAGGAATGACTGAG +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYYNEEK*CVGMTE
Trigger: CTCAGTCATTCCTACACAGCACTTTTCTTCATTATA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCTTTCTTCACAGCAGTaGACTCACTACTTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFLSSQQ*THYFLV
Trigger: TACCAGAAAGTAGTGAGTGCACTGCTGTGAAGAAAG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAGTTGGAAGGCCCACTaGGCTGTCACTTCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSWKAH*AVTSSP
Trigger: AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTAGTTGGAAGGCCCACTaGGCTGTCACTTCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISSWKAH*AVTSSP
Trigger: AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACACCCTGGCATATAGTTaGAAGGCCCACTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENTLAYS*KAHWAV
Trigger: GACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCTTGTCCAGACTTCCTaGGTGGTCTCCTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLLVQTS*VVSSLL
Trigger: GAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAG...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCTTGTCCAGACTTCCTaGGTGGTCTCCTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLLVQTS*VVSSLL
Trigger: GAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAG...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGTATTTAAAAAGAGCCTaGCACCTTCTCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQYLKRA*HLLPRS
Trigger: AGAGCGAGGGAGAAGGTGCCAGGCTCTTTTTAAATA...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCTGATGGGAGGTGTTTaGGTCATGGGGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMLMGGV*VMGEDP
Trigger: GGGGTCTTCCCCCATGACCCAAACACCTCCCATCAG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTCCCAGTGTTGGAGGTaGGGCCTGATGGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLSQCWR*GLMGGV
Trigger: AACACCTCCCATCAGGCCCCACCTCCAACACTGGGA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATTAACCTGGAGTGGTaGCAGATACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQINLEW*QIPVIP
Trigger: TGGGATTACAGGTATCTGCCACCACTCCAGGTTAAT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCAGATAGTAGAGACCTaGAAAAGCTTGTATGTAGCC +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFQIVET*KSLYVA
Trigger: GGCTACATACAAGCTTTTCCAGGTCTCTACTATCTG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGCTTCTAGGTCTAACTaGACACTCTGGGGATACTCT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEASRSN*TLWGYS
Trigger: AGAGTATCCCCAGAGTGTCCAGTTAGACCTAGAAGC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTGTTGCCAACTCCTCTTaGTTCTGTCCTCTTATTGTT +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFVANSS*FCPLIV
Trigger: AACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCTTGTATTTACTTGAATaGCATCAGAATCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCLYLLE*HQNPAT
Trigger: AGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCTCACTGTCACCAAATaGGATTCAACGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQLTVTK*DSTSFL
Trigger: GAGGAAAGACGTTGAATCCCATTTGGTGACAGTGAG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAACATTGAGGCCTGGATaGCCGTTTAGAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARTLRPG*PFREKE
Trigger: CTCTTTCTCTCTAAACGGCCATCCAGGCCTCAATGT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAACTGCAGACCTGCATaGGTGGGGCTTACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLNCRPA*VGLTRE
Trigger: TTCCCGAGTAAGCCCCACCCATGCAGGTCTGCAGTT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAACTGCAGACCTGCATaGGTGGGGCTTACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENNCRPA*VGLTRE
Trigger: TTCCCGAGTAAGCCCCACCCATGCAGGTCTGCAGTT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAAGATTCATTTTGAGTaGGAGATGTTGGAACACTTT +
Preference number: 4 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYKIHFE*EMLEHF
Trigger: AAAGTGTTCCAACATCTCCCACTCAAAATGAATCTT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCGGCTTCGGGAGAGCTaGTTCTCAGTTTCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPRLRES*FSVSFS
Trigger: GGAAAACGAAACTGAGAACCAGCTCTCCCGAAGCCG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395127.6
ENST00000679507.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAATAATCACGGAAGTGTaGATGTTGATTCTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEIITEV*MLILRR
Trigger: GCGGCGCAGAATCAACATCCACACTTCCGTGATTAT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681463.1
3UTR CAA 72 bp CACATCAGGAGGGGCATAATGTTAGGGTGTTCCACCTaGGGTGATGCTAAATTGAATCACTTGGTTATTGTG +
Preference number: 4 (lower is better)
Translates to: HIRRGIMLGCST*GDAKLNHLVIV
Trigger: CACAATAACCAAGTGATTCAATTTAGCATCACCCAAGGTGGAACACCCTAACATTATGCCCCTCCTGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCCAGAGAAGCAAACCTaGGTCAGATGGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLPEKQT*VRWKNC
Trigger: GCAGTTCTTCCATCTGACTCAGGTTTGCTTCTCTGG...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679979.1
ENST00000680273.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTGCAGTGTCACATACATaGAGAAGTTCAGCAAGAATT +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFAVSHT*RSSARI
Trigger: AATTCTTGCTGAACTTCTTCATGTATGTGACACTGC...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACAAATATATCTGAGATaGTGCCATCCCGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARQIYLR*CHPVGL
Trigger: CAGACCTACGGGATGGCATCATCTCAGATATATTTG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACAAATATATCTGAGATaGTGCCATCCCGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEQIYLR*CHPVGL
Trigger: CAGACCTACGGGATGGCATCATCTCAGATATATTTG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTTTAGAACAAAGAGATaGGGCTGGGCGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFFRTKR*GWARWL
Trigger: GAGCCACCGCGCCCAGCCTCATCTCTTTGTTCTAAA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTTTAGAACAAAGAGATaGGGCTGGGCGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLFRTKR*GWARWL
Trigger: GAGCCACCGCGCCCAGCCTCATCTCTTTGTTCTAAA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTTTAGAACAAAGAGATaGGGCTGGGCGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMFRTKR*GWARWL
Trigger: GAGCCACCGCGCCCAGCCTCATCTCTTTGTTCTAAA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTGGGTGATGCTAAATTaGATCACTTGGTTATTGTGG +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFWVMLN*ITWLLW
Trigger: CCACAATAACCAAGTGATTCAATTTAGCATCACCCA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGCTGGGTCAACATGGTaGAATTCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARAGSTW*NSVSTK
Trigger: TTTAGTAGAGACGGAATTTCACCATGTTGACCCAGC...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGGGGACTGCATATTGTaGGTTATGTCTCTAGTTAGT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQGDCIL*VMSLVS
Trigger: ACTAACTAGAGACATAACTCACAATATGCAGTCCCC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATTACTCGGGAAACACTaGATATGGGATGCATCATGG +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAELLGKH*IWDASW
Trigger: CCATGATGCATCCCATATTCAGTGTTTCCCGAGTAA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATGTGAGAAAACAGAGTaGATACTAACGGGCATAGGG +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAECEKTE*ILTGIG
Trigger: CCCTATGCCCGTTAGTATTCACTCTGTTTTCTCACA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGGCAATAAAAAGGAATaGGATGCTGATTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQGNKKE*DADSCH
Trigger: GTGGCATGAATCAGCATCTCATTCCTTTTTATTGCC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACTGTGTAGGAATGACTaGGCTCTAAGACAAACTGGT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAELCRND*ALRQTG
Trigger: ACCAGTTTGTCTTAGAGCTCAGTCATTCCTACACAG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTAATCCTTCTGGCCCATaGACCCCCGATGCACACTGT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFNPSGP*TPDAHC
Trigger: ACAGTGTGCATCGGGGGTGCATGGGCCAGAAGGATT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAATCCTTCTGGCCCATaGACCCCCGATGCACACTGT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLNPSGP*TPDAHC
Trigger: ACAGTGTGCATCGGGGGTGCATGGGCCAGAAGGATT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGAATCCTTCTGGCCCATaGACCCCCGATGCACACTGT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMNPSGP*TPDAHC
Trigger: ACAGTGTGCATCGGGGGTGCATGGGCCAGAAGGATT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAATTCAGAAGCGAGTGTaGTGGTCACTAAAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEIQKRV*WSLKSC
Trigger: GCAACTCTTTAGTGACCAGCACACTCGCTTCTGAAT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCCAAGACTGTGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVPRLCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACCAAGACTGTGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLPRLCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGTCTTGCTTCCTCTCTTaGCATATGATCTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQSCFLS*HMISAH
Trigger: ATGTGCAGAGATCATATGGCAAGAGAGGAAGCAAGA...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACAGGCATTAGCTACTaGGTCCAGCTTTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQTGISY*VQLLSF
Trigger: AAAAGACAAAAGCTGGACGCAGTAGCTAATGCCTGT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAGTCTCAAAATCCTATaGTCAAGCCATCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARSLKIL*SSHPPL
Trigger: AAGGGGAGGATGGCTTGAGCATAGGATTTTGAGACT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAATTTTGCCACATGTGTaGCCTCTTTCTCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARILPHV*PLSLSM
Trigger: CATGGAGAGAGAAAGAGGGCACACATGTGGCAAAAT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAGGCGTGAGCCACCATaGCCAGCCAGAGTAGGAATA +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLRREPP*PARVGI
Trigger: TATTCCTACTCTGGCTGGGCATGGTGGCTCACGCCT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTAGGCGTGAGCCACCATaGCCAGCCAGAGTAGGAATA +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFRREPP*PARVGI
Trigger: TATTCCTACTCTGGCTGGGCATGGTGGCTCACGCCT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTCACCCAGGCTGGAGTaGAATGGCGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMSPRLE*NGVISA
Trigger: AGCTGAGATCACGCCATTGCACTCCAGCCTGGGTGA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTCACCCAGGCTGGAGTaGAATGGCGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFSPRLE*NGVISA
Trigger: AGCTGAGATCACGCCATTGCACTCCAGCCTGGGTGA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACCACATCCAATTAGTTaGCAACTCCTCTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARPHPIS*QLLLVL
Trigger: CAGAACCAAGAGGAGTTGGCAACTAATTGGATGTGG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACCACATCCAATTAGTTaGCAACTCCTCTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEPHPIS*QLLLVL
Trigger: CAGAACCAAGAGGAGTTGGCAACTAATTGGATGTGG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAACACTGAATATGGGATaGATCATGGAAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAETLNMG*IMEASR
Trigger: TCTGGAGGCTTCCATGATGCATCCCATATTCAGTGT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGTAAAACTGCAGACCTaGATGGGTGGGGCTTACTCG +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVVKLQT*MGGAYS
Trigger: CGAGTAAGCCCCACCCATGCAGGTCTGCAGTTTTAC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACGTAAAACTGCAGACCTaGATGGGTGGGGCTTACTCG +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENVKLQT*MGGAYS
Trigger: CGAGTAAGCCCCACCCATGCAGGTCTGCAGTTTTAC...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCTTTCTTCACAGCAGTaGACTCACTACTTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQLSSQQ*THYFLV
Trigger: TACCAGAAAGTAGTGAGTGCACTGCTGTGAAGAAAG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATGGGATGGACCTCGATaGCTCGATGAAGATTGTTTA +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARWDGPR*LDEDCL
Trigger: TAAACAATCTTCATCGAGGCATCGAGGTCCATCCCA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395127.6
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTACCCTGGCATATAGTTaGAAGGCCCACTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFTLAYS*KAHWAV
Trigger: GACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCTTGTCCAGACTTCCTaGGTGGTCTCCTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVLVQTS*VVSSLL
Trigger: GAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGGAAGAAGCAGATGCTaGTGCCATGTTTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARGRSRC*CHVSCT
Trigger: TGTACAAGAAACATGGCACCAGCATCTGCTTCTTCC...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAATTAACCTGGAGTGGTaGCAGATACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARINLEW*QIPVIP
Trigger: TGGGATTACAGGTATCTGCCACCACTCCAGGTTAAT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAAAATTAACCTGGAGTaGTGGCAGATACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFKINLE*WQIPVI
Trigger: GATTACAGGTATCTGCCACCACTCCAGGTTAATTTT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCACAAATTATGTAGCTaGCCATACACACACATGCAC +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQHKLCS*PYTHMH
Trigger: GTGCATGTGTGTGTATGGCCAGCTACATAATTTGTG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTGCACACACACAGGATaGCTTCATGGACATGCAACC +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLCTHTG*LHGHAT
Trigger: GGTTGCATGTCCATGAAGCCATCCTGTGTGTGTGCA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACAGTCAAATCCTGAGTaGAGGAAATTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEQSNPE*RKFHRT
Trigger: TGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACTCACTGTCACCAAATaGGATTCAACGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAELTVTK*DSTSFL
Trigger: GAGGAAAGACGTTGAATCCCATTTGGTGACAGTGAG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACTCACTGTCACCAAATaGGATTCAACGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARLTVTK*DSTSFL
Trigger: GAGGAAAGACGTTGAATCCCATTTGGTGACAGTGAG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTTCAGTGCAGTGTTCTaGCAGCACCTCAAGCTCACT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPFSAVF*QHLKLT
Trigger: AGTGAGCTTGAGGTGCTGCCAGAACACTGCACTGAA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAACTGCAGACCTGCATaGGTGGGGCTTACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLNCRPA*VGLTRE
Trigger: TTCCCGAGTAAGCCCCACCCATGCAGGTCTGCAGTT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTGCACTCACTACTTTCTaGTATACAAGAAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFALTTF*YTRRTA
Trigger: AGCTGTTCTTCTTGTATACCAGAAAGTAGTGAGTGC...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGCAGTGTCACATACATaGAGAAGTTCAGCAAGAATT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQAVSHT*RSSARI
Trigger: AATTCTTGCTGAACTTCTTCATGTATGTGACACTGC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAGGCAGAAGTTGCAGTaGGCCAAGACTGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVRQKLQ*AKTVSL
Trigger: CAATGACACAGTCTTGGCTCACTGCAACTTCTGCCT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTAGGCAGAAGTTGCAGTaGGCCAAGACTGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISRQKLQ*AKTVSL
Trigger: CAATGACACAGTCTTGGCTCACTGCAACTTCTGCCT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAAGTTGCAGACATCATaGCACACTTGGCCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEKLQTS*HTWPLN
Trigger: ATTTAGAGGCCAAGTGTGTCATGATGTCTGCAACTT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTGCCCCTGTCCTCCTCTaGGTAAGAGGATACTTTTTA +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPAPVLL*VRGYFL
Trigger: TAAAAAGTATCCTCTTACTCAGAGGAGGACAGGGGC...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGGGGACTGCATATTGTaGGTTATGTCTCTAGTTAGT +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARGDCIL*VMSLVS
Trigger: ACTAACTAGAGACATAACTCACAATATGCAGTCCCC...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCTCTCAGTCAAATCCTaGGTGGAGGAAATTCCACAG +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLLSVKS*VEEIPQ
Trigger: CTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAG...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATTGGGGGAAAATAAATaGACCAGGATCAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARLGENK*TRIKSS
Trigger: GCTGGATTTGATCCTGGTTCATTTATTTTCCCCCAA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTACATCATGTTCCTCCTaGAATGATGTAAGAGAAAGT +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFTSCSS*NDVRES
Trigger: ACTTTCTCTTACATCATTTCAGGAGGAACATGATGT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGTTACAACCCCTGAAATaGAATAATGGATCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQLQPLK*NNGSRQ
Trigger: TTGCCTGGATCCATTATTTCATTTCAGGGGTTGTAA...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACTCTTGGGGTTCATCTaGCTGAGACTTGTATTTACT +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARLLGFI*LRLVFT
Trigger: AGTAAATACAAGTCTCAGTCAGATGAACCCCAAGAG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAGAAACTGCAGACATTaGGGCCTGGATGGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENRNCRH*GLDGRL
Trigger: TAAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTAGAAACTGCAGACATTaGGGCCTGGATGGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISRNCRH*GLDGRL
Trigger: TAAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAAGAAACTGCAGACATTaGGGCCTGGATGGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLRNCRH*GLDGRL
Trigger: TAAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAGTGCAAAAGCCTGTTaGGGTAAAACTGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLSAKAC*GKTADL
Trigger: CAGGTCTGCAGTTTTACCTCAACAGGCTTTTGCACT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGACAGGAGAGAGCCACTaGGTGCAAAAGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMTGESH*VQKPVE
Trigger: CTCAACAGGCTTTTGCACTCAGTGGCTCTCTCCTGT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGACAGGAGAGAGCCACTaGGTGCAAAAGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLTGESH*VQKPVE
Trigger: CTCAACAGGCTTTTGCACTCAGTGGCTCTCTCCTGT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAAAGGAATGAGATGCTaGTTCATGCCACAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLKGMRC*FMPQLG
Trigger: TCCCAGCTGTGGCATGAATCAGCATCTCATTCCTTT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCAAAGGAATGAGATGCTaGTTCATGCCACAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLKGMRC*FMPQLG
Trigger: TCCCAGCTGTGGCATGAATCAGCATCTCATTCCTTT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGTTCAGACAGACGAGTaGTACCAGCGAAGACTAAGG +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVVQTDE*YQRRLR
Trigger: CCTTAGTCTTCGCTGGTATCACTCGTCTGTCTGAAC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395127.6
CDS-3UTR GCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAGCGGCCAATTGTTTTaGTTCCTGTTTAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARSGQLF*FLFSRT
Trigger: GGTTCTACTAAACAGGAAGCAAAACAATTGGCCGCT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTCACTTCTAGCCCTGTaGTCAGCAGAAAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLSLLAL*SAESHL
Trigger: AAGATGGCTTTCTGCTGAGCACAGGGCTAGAAGTGA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATCTTGCTTCCTCTCTTaGCATATGATCTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARSCFLS*HMISAH
Trigger: ATGTGCAGAGATCATATGGCAAGAGAGGAAGCAAGA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATCTTGCTTCCTCTCTTaGCATATGATCTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESCFLS*HMISAH
Trigger: ATGTGCAGAGATCATATGGCAAGAGAGGAAGCAAGA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGTTGCTGCTATAGTTTaGATGTTTGTCCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQVAAIV*MFVPQN
Trigger: ATTTTGGGGGACAAACATGCAAACTATAGCAGCAAC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTCACCCAGGCTGGAATaGAGTAACATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLSPRLE*SNMIMA
Trigger: AGCCATGATCATGTTACTGCATTCCAGCCTGGGTGA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTCACCCAGGCTGGAATaGAGTAACATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPSPRLE*SNMIMA
Trigger: AGCCATGATCATGTTACTGCATTCCAGCCTGGGTGA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTCTACCTTCACCTTCTaGAAATTCTCTTCCATCTAT +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFSTFTF*KFSSIY
Trigger: ATAGATGGAAGAGAATTTCCAGAAGGTGAAGGTAGA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTATAATGAAATCCTTCTaGCCCATGCACCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVIMKSF*PMHPRC
Trigger: GCATCGGGGGTGCATGGGCCAGAAGGATTTCATTAT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAACTAAAGAGTTGCTTTaGGACTCACACGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAETKELL*DSHVVA
Trigger: TGCTACTACGTGTGAGTCCCAAAGCAACTCTTTAGT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCAAGAGAATCATCACTaGTCTCAGGATCATAATCAA +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFQENHH*SQDHNQ
Trigger: TTGATTATGATCCTGAGACCAGTGATGATTCTCTTG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTCACAGAATTCCATTTaGATGAAAAGGCACTTAGTC +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFSQNSI*MKRHLV
Trigger: GACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTCCAGACTTCCTGGGTaGTCTCCTCTCTACTCATCT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSRLPG*SPLYSS
Trigger: AGATGAGTAGAGAGGAGACCACCCAGGAAGTCTGGA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCTTGTCCAGACTTCCTaGGTGGTCTCCTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLVQTS*VVSSLL
Trigger: GAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCTTGTCCAGACTTCCTaGGTGGTCTCCTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFLVQTS*VVSSLL
Trigger: GAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGAGTTCAAAACCAGCTaGGTCAACATGGTGAAATTC +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHAREFKTS*VNMVKF
Trigger: GAATTTCACCATGTTGACCCAGCTGGTTTTGAACTC...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCACAGGATGGCTTCATaGACATGCAACCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLHRMAS*TCNLCS
Trigger: ACTGCACAGGTTGCATGTCCATGAAGCCATCCTGTG...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCACAGGATGGCTTCATaGACATGCAACCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENHRMAS*TCNLCS
Trigger: ACTGCACAGGTTGCATGTCCATGAAGCCATCCTGTG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTGCACACACACAGGATaGCTTCATGGACATGCAACC +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLCTHTG*LHGHAT
Trigger: GGTTGCATGTCCATGAAGCCATCCTGTGTGTGTGCA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATGCACACACACAGGATaGCTTCATGGACATGCAACC +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLCTHTG*LHGHAT
Trigger: GGTTGCATGTCCATGAAGCCATCCTGTGTGTGTGCA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTGCACACACACAGGATaGCTTCATGGACATGCAACC +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVCTHTG*LHGHAT
Trigger: GGTTGCATGTCCATGAAGCCATCCTGTGTGTGTGCA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCCTATGGAGTATTCTTaGGGGAAAATAAATGAACCA +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFPMEYS*GKINEP
Trigger: TGGTTCATTTATTTTCCCCCAAGAATACTCCATAGG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGTTGCCAACTCCTCTTaGTTCTGTCCTCTTATTGTT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEVANSS*FCPLIV
Trigger: AACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTTCAGTGCAGTGTTCTaGCAGCACCTCAAGCTCACT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISFSAVF*QHLKLT
Trigger: AGTGAGCTTGAGGTGCTGCCAGAACACTGCACTGAA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATTCAGTGCAGTGTTCTaGCAGCACCTCAAGCTCACT +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLFSAVF*QHLKLT
Trigger: AGTGAGCTTGAGGTGCTGCCAGAACACTGCACTGAA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTTCAGTGCAGTGTTCTaGCAGCACCTCAAGCTCACT +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLFSAVF*QHLKLT
Trigger: AGTGAGCTTGAGGTGCTGCCAGAACACTGCACTGAA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCATATGGGATGCATCATaGAAGCCTCCAGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLIWDAS*KPPEEH
Trigger: ATGCTCCTCTGGAGGCTTCCATGATGCATCCCATAT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTATATGGGATGCATCATaGAAGCCTCCAGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPIWDAS*KPPEEH
Trigger: ATGCTCCTCTGGAGGCTTCCATGATGCATCCCATAT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCCATCAGCTGATGAATaGATACATAAAATGCGACAT +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFPSADE*IHKMRH
Trigger: ATGTCGCATTTTATGTATCCATTCATCAGCTGATGG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCGGCTTCGGGAGAGCTaGTTCTCAGTTTCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMRLRES*FSVSFS
Trigger: GGAAAACGAAACTGAGAACCAGCTCTCCCGAAGCCG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395127.6
ENST00000679507.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCGTCTGCTACGGGATTaGGGTAAATTGGCGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLRLLRD*GKLALD
Trigger: ATCCAGCGCCAATTTACCCCAATCCCGTAGCAGACG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCCAGAGAAGCAAACCTaGGTCAGATGGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMPEKQT*VRWKNC
Trigger: GCAGTTCTTCCATCTGACTCAGGTTTGCTTCTCTGG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679979.1
ENST00000680273.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGTCTGTGAAAAACTTTaGTGTTTCAAAAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQVCEKL*CFKSSV
Trigger: GACACTGCTTTTGAAACATCAAAGTTTTTCACAGAC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACATCCCGTAGGTCTGTaGAAAACTTTGATGTTTCAA +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARHPVGL*KTLMFQ
Trigger: TTGAAACATCAAAGTTTTTCACAGACCTACGGGATG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCAAATATATCTGAGATaGTGCCATCCCGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLQIYLR*CHPVGL
Trigger: CAGACCTACGGGATGGCATCATCTCAGATATATTTG...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTCTCATGTTGAAATTTaGTCCCAGTGTTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLSHVEI*SQCWRW
Trigger: CCACCTCCAACACTGGGATCAAATTTCAACATGAGA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTCTCATGTTGAAATTTaGTCCCAGTGTTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPSHVEI*SQCWRW
Trigger: CCACCTCCAACACTGGGATCAAATTTCAACATGAGA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACCCAAAATCTCATGTTaGAATTTGATCCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEPKISC*NLIPVL
Trigger: CAACACTGGGATCAAATTTCAACATGAGATTTTGGG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATGGGTGATGCTAAATTaGATCACTTGGTTATTGTGG +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARWVMLN*ITWLLW
Trigger: CCACAATAACCAAGTGATTCAATTTAGCATCACCCA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGCTGGGTCAACATGGTaGAATTCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLAGSTW*NSVSTK
Trigger: TTTAGTAGAGACGGAATTTCACCATGTTGACCCAGC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTGCTGGGTCAACATGGTaGAATTCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPAGSTW*NSVSTK
Trigger: TTTAGTAGAGACGGAATTTCACCATGTTGACCCAGC...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACGCCCCTGTCCTCCTCTaGGTAAGAGGATACTTTTTA +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENAPVLL*VRGYFL
Trigger: TAAAAAGTATCCTCTTACTCAGAGGAGGACAGGGGC...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGCCCCTGTCCTCCTCTaGGTAAGAGGATACTTTTTA +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVAPVLL*VRGYFL
Trigger: TAAAAAGTATCCTCTTACTCAGAGGAGGACAGGGGC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTCTCAGTCAAATCCTaGGTGGAGGAAATTCCACAG +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISLSVKS*VEEIPQ
Trigger: CTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCTCTCAGTCAAATCCTaGGTGGAGGAAATTCCACAG +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENLSVKS*VEEIPQ
Trigger: CTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACATCATGTTCCTCCTaGAATGATGTAAGAGAAAGT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQTSCSS*NDVRES
Trigger: ACTTTCTCTTACATCATTTCAGGAGGAACATGATGT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATTACAACCCCTGAAATaGAATAATGGATCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAELQPLK*NNGSRQ
Trigger: TTGCCTGGATCCATTATTTCATTTCAGGGGTTGTAA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTTACTCGGGAAACACTaGATATGGGATGCATCATGG +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLLLGKH*IWDASW
Trigger: CCATGATGCATCCCATATTCAGTGTTTCCCGAGTAA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAGTGCAAAAGCCTGTTaGGGTAAAACTGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLSAKAC*GKTADL
Trigger: CAGGTCTGCAGTTTTACCTCAACAGGCTTTTGCACT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTGTGAGAAAACAGAGTaGATACTAACGGGCATAGGG +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLCEKTE*ILTGIG
Trigger: CCCTATGCCCGTTAGTATTCACTCTGTTTTCTCACA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAAAGGAATGAGATGCTaGTTCATGCCACAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLKGMRC*FMPQLG
Trigger: TCCCAGCTGTGGCATGAATCAGCATCTCATTCCTTT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTAAAGGAATGAGATGCTaGTTCATGCCACAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISKGMRC*FMPQLG
Trigger: TCCCAGCTGTGGCATGAATCAGCATCTCATTCCTTT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCTGTGTAGGAATGACTaGGCTCTAAGACAAACTGGT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLLCRND*ALRQTG
Trigger: ACCAGTTTGTCTTAGAGCTCAGTCATTCCTACACAG...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCTGTGTAGGAATGACTaGGCTCTAAGACAAACTGGT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPLCRND*ALRQTG
Trigger: ACCAGTTTGTCTTAGAGCTCAGTCATTCCTACACAG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCCATGCACCCCCGATaGACACTGTTCATAATTTAC +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISPMHPR*TLFIIY
Trigger: GTAAATTATGAACAGTGTGCATCGGGGGTGCATGGG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCCCATGCACCCCCGATaGACACTGTTCATAATTTAC +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVPMHPR*TLFIIY
Trigger: GTAAATTATGAACAGTGTGCATCGGGGGTGCATGGG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTACATGATCAAGTTTTaGCAATGCTTTTACTTCACG +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFYMIKF*QCFYFT
Trigger: CGTGAAGTAAAAGCATTGGCAAAACTTGATCATGTA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGTTGCTGCTATAGTTTaGATGTTTGTCCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARVAAIV*MFVPQN
Trigger: ATTTTGGGGGACAAACATGCAAACTATAGCAGCAAC...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAATGGTAGCTGGTTGCTaGTATAGTTTGCATGTTTGT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEMVAGC*YSLHVC
Trigger: ACAAACATGCAAACTATAGCAGCAACCAGCTACCAT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAGTCTCAAAATCCTATaGTCAAGCCATCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLSLKIL*SSHPPL
Trigger: AAGGGGAGGATGGCTTGAGCATAGGATTTTGAGACT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTCACCCAGGCTGGAATaGAGTAACATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISSPRLE*SNMIMA
Trigger: AGCCATGATCATGTTACTGCATTCCAGCCTGGGTGA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTCACCCAGGCTGGAATaGAGTAACATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSPRLE*SNMIMA
Trigger: AGCCATGATCATGTTACTGCATTCCAGCCTGGGTGA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACAATGGCTAATATTTTaGCACATGTGTGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEQWLIF*HMCALF
Trigger: AAAGAGGGCACACATGTGGCAAAATATTAGCCATTG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTGACACATCAACCAAATaGAATGTTGGATCTAGATTT +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFDTSTK*NVGSRF
Trigger: AAATCTAGATCCAACATTGCATTTGGTTGATGTGTC...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCCACATCCAATTAGTTaGCAACTCCTCTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPPHPIS*QLLLVL
Trigger: CAGAACCAAGAGGAGTTGGCAACTAATTGGATGTGG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACTTTCCTCCCAAACATaGTCTACCTCACCATGTCGA +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLLSSQT*STSPCR
Trigger: TCGACATGGTGAGGTAGAGCATGTTTGGGAGGAAAG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTGAGAAGCATTTTATTTaGCTCACAGTTTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFEKHFI*LTVLPI
Trigger: AATAGGCAAAACTGTGAGGCAAATAAAATGCTTCTC...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCACACTGAATATGGGATaGATCATGGAAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLTLNMG*IMEASR
Trigger: TCTGGAGGCTTCCATGATGCATCCCATATTCAGTGT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCACACTGAATATGGGATaGATCATGGAAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLTLNMG*IMEASR
Trigger: TCTGGAGGCTTCCATGATGCATCCCATATTCAGTGT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTATAATGAAGAAAAGTaGTGTGTAGGAATGACTGAG +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFYNEEK*CVGMTE
Trigger: CTCAGTCATTCCTACACAGCACTTTTCTTCATTATA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCTTCTTCCCGTATCCTaGTTGGAAGCTTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLLLPVS*LEALSK
Trigger: TTTGGACAAAGCTTCCAACCAGGATACGGGAAGAAG...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCTTCTTCCCGTATCCTaGTTGGAAGCTTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPLLPVS*LEALSK
Trigger: TTTGGACAAAGCTTCCAACCAGGATACGGGAAGAAG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGATAATGAAATCCTTCTaGCCCATGCACCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMIMKSF*PMHPRC
Trigger: GCATCGGGGGTGCATGGGCCAGAAGGATTTCATTAT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCAGAAGCGAGTGTGCTaGTCACTAAAGAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLQKRVC*SLKSCF
Trigger: AAAGCAACTCTTTAGTGACCAGCACACTCGCTTCTG...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTCCAGACTTCCTGGGTaGTCTCCTCTCTACTCATCT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMSRLPG*SPLYSS
Trigger: AGATGAGTAGAGAGGAGACCACCCAGGAAGTCTGGA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCGGAAGAAGCAGATGCTaGTGCCATGTTTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLGRSRC*CHVSCT
Trigger: TGTACAAGAAACATGGCACCAGCATCTGCTTCTTCC...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGGAAGAAGCAGATGCTaGTGCCATGTTTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLGRSRC*CHVSCT
Trigger: TGTACAAGAAACATGGCACCAGCATCTGCTTCTTCC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTATTTAAAAAGAGCCTaGCACCTTCTCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPYLKRA*HLLPRS
Trigger: AGAGCGAGGGAGAAGGTGCCAGGCTCTTTTTAAATA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTATTTAAAAAGAGCCTaGCACCTTCTCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLYLKRA*HLLPRS
Trigger: AGAGCGAGGGAGAAGGTGCCAGGCTCTTTTTAAATA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCACAGGATGGCTTCATaGACATGCAACCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMHRMAS*TCNLCS
Trigger: ACTGCACAGGTTGCATGTCCATGAAGCCATCCTGTG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCACAGGATGGCTTCATaGACATGCAACCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLHRMAS*TCNLCS
Trigger: ACTGCACAGGTTGCATGTCCATGAAGCCATCCTGTG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCACAGGATGGCTTCATaGACATGCAACCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFHRMAS*TCNLCS
Trigger: ACTGCACAGGTTGCATGTCCATGAAGCCATCCTGTG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTGCACACACACAGGATaGCTTCATGGACATGCAACC +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLCTHTG*LHGHAT
Trigger: GGTTGCATGTCCATGAAGCCATCCTGTGTGTGTGCA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCATGGTGAACACTCAGTaGGGACTGCATATTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLMVNTQ*GLHIVS
Trigger: ACTCACAATATGCAGTCCCCACTGAGTGTTCACCAT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTATGGTGAACACTCAGTaGGGACTGCATATTGTGAGT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPMVNTQ*GLHIVS
Trigger: ACTCACAATATGCAGTCCCCACTGAGTGTTCACCAT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGTCAAATCCTGAGTaGAGGAAATTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLQSNPE*RKFHRT
Trigger: TGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTG...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAGCTTCTAGGTCTAACTaGACACTCTGGGGATACTCT +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLASRSN*TLWGYS
Trigger: AGAGTATCCCCAGAGTGTCCAGTTAGACCTAGAAGC...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTGCTTCTAGGTCTAACTaGACACTCTGGGGATACTCT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISASRSN*TLWGYS
Trigger: AGAGTATCCCCAGAGTGTCCAGTTAGACCTAGAAGC...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCCTATGGAGTATTCTTaGGGGAAAATAAATGAACCA +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQPMEYS*GKINEP
Trigger: TGGTTCATTTATTTTCCCCCAAGAATACTCCATAGG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAACTTTGTAGTAGTTaGTACCACCAGAACTCATTG +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQKLCSS*YHQNSL
Trigger: CAATGAGTTCTGGTGGTACCAACTACTACAAAGTTT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTTTCAAAGTATTGGTTaGGCCATACCTTGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: VANSSWFCPLIVQALLVFFQSIG*AIPCFK
Trigger: TTTAAAGCAAGGTATGGCCCAACCAATACTTTGAAA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGACATTGAGGCCTGGATaGCCGTTTAGAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLTLRPG*PFREKE
Trigger: CTCTTTCTCTCTAAACGGCCATCCAGGCCTCAATGT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTACATTGAGGCCTGGATaGCCGTTTAGAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVTLRPG*PFREKE
Trigger: CTCTTTCTCTCTAAACGGCCATCCAGGCCTCAATGT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTATATGGGATGCATCATaGAAGCCTCCAGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVIWDAS*KPPEEH
Trigger: ATGCTCCTCTGGAGGCTTCCATGATGCATCCCATAT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACATATGGGATGCATCATaGAAGCCTCCAGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENIWDAS*KPPEEH
Trigger: ATGCTCCTCTGGAGGCTTCCATGATGCATCCCATAT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCCATCAGCTGATGAATaGATACATAAAATGCGACAT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQPSADE*IHKMRH
Trigger: ATGTCGCATTTTATGTATCCATTCATCAGCTGATGG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGTTGAGTGGGAGATGTTaGAACACTTTGGAAATAACA +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQLSGRC*NTLEIT
Trigger: TGTTATTTCCAAAGTGTTCCAACATCTCCCACTCAA...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGCACTCACTACTTTCTaGTATACAAGAAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEALTTF*YTRRTA
Trigger: AGCTGTTCTTCTTGTATACCAGAAAGTAGTGAGTGC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACACTACTCCCTGCTTCTaGCGGTATGTATTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENTTPCF*RYVLSS
Trigger: GGAACTTAATACATACCGTCAGAAGCAGGGAGTAGT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTACTACTCCCTGCTTCTaGCGGTATGTATTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISTTPCF*RYVLSS
Trigger: GGAACTTAATACATACCGTCAGAAGCAGGGAGTAGT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGAATTAGGCAGTTCTTaGTATTTAAGTACTACTCCC +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEELGSS*YLSTTP
Trigger: GGGAGTAGTACTTAAATATCAAGAACTGCCTAATTC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTATCATGTGGAGGTCCTaGATTAGGCAGTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPIMWRS*IRQFLI
Trigger: TATCAAGAACTGCCTAATTCAGGACCTCCACATGAT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCATCATGTGGAGGTCCTaGATTAGGCAGTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLIMWRS*IRQFLI
Trigger: TATCAAGAACTGCCTAATTCAGGACCTCCACATGAT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACAAATATATCTGAGATaGTGCCATCCCGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLQIYLR*CHPVGL
Trigger: CAGACCTACGGGATGGCATCATCTCAGATATATTTG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCAAATATATCTGAGATaGTGCCATCCCGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISQIYLR*CHPVGL
Trigger: CAGACCTACGGGATGGCATCATCTCAGATATATTTG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATTTCCCCTGTATAATTaGTACCTCTTCTGTAGGATT +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARFPLYN*YLFCRI
Trigger: AATCCTACAGAAGAGGTATCAATTATACAGGGGAAA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTGCTGGGTCAACATGGTaGAATTCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISAGSTW*NSVSTK
Trigger: TTTAGTAGAGACGGAATTTCACCATGTTGACCCAGC...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACGCTGGGTCAACATGGTaGAATTCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENAGSTW*NSVSTK
Trigger: TTTAGTAGAGACGGAATTTCACCATGTTGACCCAGC...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCAAGTTGCAGACATCATaGCACACTTGGCCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLKLQTS*HTWPLN
Trigger: ATTTAGAGGCCAAGTGTGTCATGATGTCTGCAACTT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGGCCCCTGTCCTCCTCTaGGTAAGAGGATACTTTTTA +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMAPVLL*VRGYFL
Trigger: TAAAAAGTATCCTCTTACTCAGAGGAGGACAGGGGC...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGGGGACTGCATATTGTaGGTTATGTCTCTAGTTAGT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLGDCIL*VMSLVS
Trigger: ACTAACTAGAGACATAACTCACAATATGCAGTCCCC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCGGGGACTGCATATTGTaGGTTATGTCTCTAGTTAGT +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLGDCIL*VMSLVS
Trigger: ACTAACTAGAGACATAACTCACAATATGCAGTCCCC...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAAATCTCAAATTATGGTaGACACTCAGTGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLNLKLW*TLSGDC
Trigger: GCAGTCCCCACTGAGTGTTCACCATAATTTGAGATT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTTTGTTGCAGCTGGGTaGTGGGTAGAGTTTCATTAT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLFVAAG*WVEFHY
Trigger: ATAATGAAACTCTACCCATCACCCAGCTGCAACAAA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCTCTCAGTCAAATCCTaGGTGGAGGAAATTCCACAG +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLSVKS*VEEIPQ
Trigger: CTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCTCTCAGTCAAATCCTaGGTGGAGGAAATTCCACAG +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFLSVKS*VEEIPQ
Trigger: CTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTTGGGGGAAAATAAATaGACCAGGATCAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLLGENK*TRIKSS
Trigger: GCTGGATTTGATCCTGGTTCATTTATTTTCCCCCAA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCTCTTGGGGTTCATCTaGCTGAGACTTGTATTTACT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLLLGFI*LRLVFT
Trigger: AGTAAATACAAGTCTCAGTCAGATGAACCCCAAGAG...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTTACTCGGGAAACACTaGATATGGGATGCATCATGG +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISLLGKH*IWDASW
Trigger: CCATGATGCATCCCATATTCAGTGTTTCCCGAGTAA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTAGTGCAAAAGCCTGTTaGGGTAAAACTGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFSAKAC*GKTADL
Trigger: CAGGTCTGCAGTTTTACCTCAACAGGCTTTTGCACT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTGTGAGAAAACAGAGTaGATACTAACGGGCATAGGG +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLCEKTE*ILTGIG
Trigger: CCCTATGCCCGTTAGTATTCACTCTGTTTTCTCACA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTGGCAATAAAAAGGAATaGGATGCTGATTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPGNKKE*DADSCH
Trigger: GTGGCATGAATCAGCATCTCATTCCTTTTTATTGCC...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCTGTGTAGGAATGACTaGGCTCTAAGACAAACTGGT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVLCRND*ALRQTG
Trigger: ACCAGTTTGTCTTAGAGCTCAGTCATTCCTACACAG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCCCATGCACCCCCGATaGACACTGTTCATAATTTAC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMPMHPR*TLFIIY
Trigger: GTAAATTATGAACAGTGTGCATCGGGGGTGCATGGG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTATTCAGAAGCGAGTGTaGTGGTCACTAAAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISIQKRV*WSLKSC
Trigger: GCAACTCTTTAGTGACCAGCACACTCGCTTCTGAAT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAATTCAGAAGCGAGTGTaGTGGTCACTAAAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLIQKRV*WSLKSC
Trigger: GCAACTCTTTAGTGACCAGCACACTCGCTTCTGAAT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATTCTTCTTTTGATGTaGATTATGGTTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQILLLM*IMVVPC
Trigger: ACAGGGAACAACCATAATGCACATCAAAAGAAGAAT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTCTGTTTTTAGCTACTaGCTTACAGCACGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLSVFSY*LTARLS
Trigger: AGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTCACTTCTAGCCCTGTaGTCAGCAGAAAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFSLLAL*SAESHL
Trigger: AAGATGGCTTTCTGCTGAGCACAGGGCTAGAAGTGA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTCACTTCTAGCCCTGTaGTCAGCAGAAAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMSLLAL*SAESHL
Trigger: AAGATGGCTTTCTGCTGAGCACAGGGCTAGAAGTGA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGTTTCTTGTACAGCCTaGAGAACTGTAAGTCATATA +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEVSCTA*RTVSHI
Trigger: TATATGACTTACAGTTCTGCAGGCTGTACAAGAAAC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTCTTGCTTCCTCTCTTaGCATATGATCTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPSCFLS*HMISAH
Trigger: ATGTGCAGAGATCATATGGCAAGAGAGGAAGCAAGA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTACAGGCATTAGCTACTaGGTCCAGCTTTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPTGISY*VQLLSF
Trigger: AAAAGACAAAAGCTGGACGCAGTAGCTAATGCCTGT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCACAGGCATTAGCTACTaGGTCCAGCTTTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLTGISY*VQLLSF
Trigger: AAAAGACAAAAGCTGGACGCAGTAGCTAATGCCTGT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAGTCTCAAAATCCTATaGTCAAGCCATCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSLKIL*SSHPPL
Trigger: AAGGGGAGGATGGCTTGAGCATAGGATTTTGAGACT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAGTCTCAAAATCCTATaGTCAAGCCATCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVSLKIL*SSHPPL
Trigger: AAGGGGAGGATGGCTTGAGCATAGGATTTTGAGACT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTATTTTGCCACATGTGTaGCCTCTTTCTCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISILPHV*PLSLSM
Trigger: CATGGAGAGAGAAAGAGGGCACACATGTGGCAAAAT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACATTTTGCCACATGTGTaGCCTCTTTCTCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENILPHV*PLSLSM
Trigger: CATGGAGAGAGAAAGAGGGCACACATGTGGCAAAAT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTATTTTGCCACATGTGTaGCCTCTTTCTCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVILPHV*PLSLSM
Trigger: CATGGAGAGAGAAAGAGGGCACACATGTGGCAAAAT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCCACATCCAATTAGTTaGCAACTCCTCTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENPHPIS*QLLLVL
Trigger: CAGAACCAAGAGGAGTTGGCAACTAATTGGATGTGG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCCACATCCAATTAGTTaGCAACTCCTCTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVPHPIS*QLLLVL
Trigger: CAGAACCAAGAGGAGTTGGCAACTAATTGGATGTGG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCTTTCCTCCCAAACATaGTCTACCTCACCATGTCGA +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMLSSQT*STSPCR
Trigger: TCGACATGGTGAGGTAGAGCATGTTTGGGAGGAAAG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCTTTCCTCCCAAACATaGTCTACCTCACCATGTCGA +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFLSSQT*STSPCR
Trigger: TCGACATGGTGAGGTAGAGCATGTTTGGGAGGAAAG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAACACTGAATATGGGATaGATCATGGAAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLTLNMG*IMEASR
Trigger: TCTGGAGGCTTCCATGATGCATCCCATATTCAGTGT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCATGCCACAGCTGGGATaGACCTTGAAAATATACTCA +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLMPQLG*TLKIYS
Trigger: TGAGTATATTTTCAAGGTGCATCCCAGCTGTGGCAT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCATGCCACAGCTGGGATaGACCTTGAAAATATACTCA +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLMPQLG*TLKIYS
Trigger: TGAGTATATTTTCAAGGTGCATCCCAGCTGTGGCAT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCTTCTTCCCGTATCCTaGTTGGAAGCTTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVLLPVS*LEALSK
Trigger: TTTGGACAAAGCTTCCAACCAGGATACGGGAAGAAG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCTTCTTCCCGTATCCTaGTTGGAAGCTTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENLLPVS*LEALSK
Trigger: TTTGGACAAAGCTTCCAACCAGGATACGGGAAGAAG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTTCTTCCCGTATCCTaGTTGGAAGCTTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISLLPVS*LEALSK
Trigger: TTTGGACAAAGCTTCCAACCAGGATACGGGAAGAAG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATCTACCTTCACCTTCTaGAAATTCTCTTCCATCTAT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESTFTF*KFSSIY
Trigger: ATAGATGGAAGAGAATTTCCAGAAGGTGAAGGTAGA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGTTAGTCTTTTCTTCTaGGCAATTCTATTGATAAGG +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQVSLFF*AILLIR
Trigger: CCTTATCAATAGAATTGCCCAGAAGAAAAGACTAAC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTACTAAAGAGTTGCTTTaGGACTCACACGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPTKELL*DSHVVA
Trigger: TGCTACTACGTGTGAGTCCCAAAGCAACTCTTTAGT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCAGAAGCGAGTGTGCTaGTCACTAAAGAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENQKRVC*SLKSCF
Trigger: AAAGCAACTCTTTAGTGACCAGCACACTCGCTTCTG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCAGAAGCGAGTGTGCTaGTCACTAAAGAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLQKRVC*SLKSCF
Trigger: AAAGCAACTCTTTAGTGACCAGCACACTCGCTTCTG...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACAGAAGCGAGTGTGCTaGTCACTAAAGAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLQKRVC*SLKSCF
Trigger: AAAGCAACTCTTTAGTGACCAGCACACTCGCTTCTG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACAAGAGAATCATCACTaGTCTCAGGATCATAATCAA +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARQENHH*SQDHNQ
Trigger: TTGATTATGATCCTGAGACCAGTGATGATTCTCTTG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAGGAAGAAGCAGATGCTaGTGCCATGTTTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLGRSRC*CHVSCT
Trigger: TGTACAAGAAACATGGCACCAGCATCTGCTTCTTCC...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACGGAAGAAGCAGATGCTaGTGCCATGTTTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENGRSRC*CHVSCT
Trigger: TGTACAAGAAACATGGCACCAGCATCTGCTTCTTCC...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTATTTAAAAAGAGCCTaGCACCTTCTCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLYLKRA*HLLPRS
Trigger: AGAGCGAGGGAGAAGGTGCCAGGCTCTTTTTAAATA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGATTAACCTGGAGTGGTaGCAGATACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLINLEW*QIPVIP
Trigger: TGGGATTACAGGTATCTGCCACCACTCCAGGTTAAT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTGAGTTCAAAACCAGCTaGGTCAACATGGTGAAATTC +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPEFKTS*VNMVKF
Trigger: GAATTTCACCATGTTGACCCAGCTGGTTTTGAACTC...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGTACATTCTCACTAACTaGCCACATCATTTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQYILTN*PHHLVF
Trigger: AAACACTAAATGATGTGGCCAGTTAGTGAGAATGTA...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCACAAATTATGTAGCTaGCCATACACACACATGCAC +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPHKLCS*PYTHMH
Trigger: GTGCATGTGTGTGTATGGCCAGCTACATAATTTGTG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGATAGTAGAGACCTaGAAAAGCTTGTATGTAGCC +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLQIVET*KSLYVA
Trigger: GGCTACATACAAGCTTTTCCAGGTCTCTACTATCTG...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACATGGTGAACACTCAGTaGGGACTGCATATTGTGAGT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENMVNTQ*GLHIVS
Trigger: ACTCACAATATGCAGTCCCCACTGAGTGTTCACCAT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCATTAGTTGGGTGTGTTaGTGTATGCATGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLISWVC*CMHVVP
Trigger: TGGGACTACATGCATACACCAACACACCCAACTAAT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCATTAGTTGGGTGTGTTaGTGTATGCATGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLISWVC*CMHVVP
Trigger: TGGGACTACATGCATACACCAACACACCCAACTAAT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTATTAGTTGGGTGTGTTaGTGTATGCATGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPISWVC*CMHVVP
Trigger: TGGGACTACATGCATACACCAACACACCCAACTAAT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCAGTCAAATCCTGAGTaGAGGAAATTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVQSNPE*RKFHRT
Trigger: TGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCAGTCAAATCCTGAGTaGAGGAAATTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENQSNPE*RKFHRT
Trigger: TGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCAGTCAAATCCTGAGTaGAGGAAATTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISQSNPE*RKFHRT
Trigger: TGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGGCTTCTAGGTCTAACTaGACACTCTGGGGATACTCT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLASRSN*TLWGYS
Trigger: AGAGTATCCCCAGAGTGTCCAGTTAGACCTAGAAGC...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACCTATGGAGTATTCTTaGGGGAAAATAAATGAACCA +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEPMEYS*GKINEP
Trigger: TGGTTCATTTATTTTCCCCCAAGAATACTCCATAGG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGTTGCCAACTCCTCTTaGTTCTGTCCTCTTATTGTT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLVANSS*FCPLIV
Trigger: AACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTCACTGTCACCAAATaGGATTCAACGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISLTVTK*DSTSFL
Trigger: GAGGAAAGACGTTGAATCCCATTTGGTGACAGTGAG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGACATTGAGGCCTGGATaGCCGTTTAGAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLTLRPG*PFREKE
Trigger: CTCTTTCTCTCTAAACGGCCATCCAGGCCTCAATGT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGACATTGAGGCCTGGATaGCCGTTTAGAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMTLRPG*PFREKE
Trigger: CTCTTTCTCTCTAAACGGCCATCCAGGCCTCAATGT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACCATCAGCTGATGAATaGATACATAAAATGCGACAT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEPSADE*IHKMRH
Trigger: ATGTCGCATTTTATGTATCCATTCATCAGCTGATGG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CAA 72 bp TGCACTCACTACTTTCTGGTATACAAGAAGAACAGCTaGTCCCCACTCTTACAGTGTAATGAAATTAGCAGT +
Preference number: 4 (lower is better)
Translates to: CTHYFLVYKKNS*SPLLQCNEISS
Trigger: ACTGCTAATTTCATTACACTGTAAGAGTGGGGACAAGCTGTTCTTCTTGTATACCAGAAAGTAGTGAGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCATCCCGTAGGTCTGTaGAAAACTTTGATGTTTCAA +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPHPVGL*KTLMFQ
Trigger: TTGAAACATCAAAGTTTTTCACAGACCTACGGGATG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCAAATATATCTGAGATaGTGCCATCCCGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMQIYLR*CHPVGL
Trigger: CAGACCTACGGGATGGCATCATCTCAGATATATTTG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTAGTTACCATTACCTTTaGAAGTCCATTTCCCCAATC +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPSYHYL*KSISPI
Trigger: GATTGGGGAAATGGACTTTCAAAGGTAATGGTAACT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTCTCATGTTGAAATTTaGTCCCAGTGTTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMSHVEI*SQCWRW
Trigger: CCACCTCCAACACTGGGATCAAATTTCAACATGAGA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTGGGTGATGCTAAATTaGATCACTTGGTTATTGTGG +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLWVMLN*ITWLLW
Trigger: CCACAATAACCAAGTGATTCAATTTAGCATCACCCA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTGGGTGATGCTAAATTaGATCACTTGGTTATTGTGG +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLWVMLN*ITWLLW
Trigger: CCACAATAACCAAGTGATTCAATTTAGCATCACCCA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTGGGTGATGCTAAATTaGATCACTTGGTTATTGTGG +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPWVMLN*ITWLLW
Trigger: CCACAATAACCAAGTGATTCAATTTAGCATCACCCA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTATGACACTGACTTTTTaGGAAGCCCAAGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPMTLTF*EAQVNH
Trigger: ATGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCAT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTAAGTTGCAGACATCATaGCACACTTGGCCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISKLQTS*HTWPLN
Trigger: ATTTAGAGGCCAAGTGTGTCATGATGTCTGCAACTT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAAGTTGCAGACATCATaGCACACTTGGCCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVKLQTS*HTWPLN
Trigger: ATTTAGAGGCCAAGTGTGTCATGATGTCTGCAACTT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGAATCTCAAATTATGGTaGACACTCAGTGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMNLKLW*TLSGDC
Trigger: GCAGTCCCCACTGAGTGTTCACCATAATTTGAGATT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTTTGTTGCAGCTGGGTaGTGGGTAGAGTTTCATTAT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISFVAAG*WVEFHY
Trigger: ATAATGAAACTCTACCCATCACCCAGCTGCAACAAA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTTACAACCCCTGAAATaGAATAATGGATCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLLQPLK*NNGSRQ
Trigger: TTGCCTGGATCCATTATTTCATTTCAGGGGTTGTAA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTGGGGTTCATCTGACTaGGACTTGTATTTACTTGAA +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLWGSSD*DLYLLE
Trigger: TTCAAGTAAATACAAGTCTCAGTCAGATGAACCCCA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTGGGGTTCATCTGACTaGGACTTGTATTTACTTGAA +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPWGSSD*DLYLLE
Trigger: TTCAAGTAAATACAAGTCTCAGTCAGATGAACCCCA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTGGGGTTCATCTGACTaGGACTTGTATTTACTTGAA +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLWGSSD*DLYLLE
Trigger: TTCAAGTAAATACAAGTCTCAGTCAGATGAACCCCA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACTCTTGGGGTTCATCTaGCTGAGACTTGTATTTACT +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLLLGFI*LRLVFT
Trigger: AGTAAATACAAGTCTCAGTCAGATGAACCCCAAGAG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCTCTTGGGGTTCATCTaGCTGAGACTTGTATTTACT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENLLGFI*LRLVFT
Trigger: AGTAAATACAAGTCTCAGTCAGATGAACCCCAAGAG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTTACTCGGGAAACACTaGATATGGGATGCATCATGG +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFLLGKH*IWDASW
Trigger: CCATGATGCATCCCATATTCAGTGTTTCCCGAGTAA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTTACTCGGGAAACACTaGATATGGGATGCATCATGG +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLLGKH*IWDASW
Trigger: CCATGATGCATCCCATATTCAGTGTTTCCCGAGTAA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTGGTTACCTAGAGTTGTaGGAAAACAGAGTGAATACT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPGYLEL*ENRVNT
Trigger: AGTATTCACTCTGTTTTCTCACAACTCTAGGTAACC...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGGTTACCTAGAGTTGTaGGAAAACAGAGTGAATACT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLGYLEL*ENRVNT
Trigger: AGTATTCACTCTGTTTTCTCACAACTCTAGGTAACC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGGCAATAAAAAGGAATaGGATGCTGATTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVGNKKE*DADSCH
Trigger: GTGGCATGAATCAGCATCTCATTCCTTTTTATTGCC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAGGCAATAAAAAGGAATaGGATGCTGATTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLGNKKE*DADSCH
Trigger: GTGGCATGAATCAGCATCTCATTCCTTTTTATTGCC...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCTGTGTAGGAATGACTaGGCTCTAAGACAAACTGGT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLCRND*ALRQTG
Trigger: ACCAGTTTGTCTTAGAGCTCAGTCATTCCTACACAG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGACCTCGATGCCTCGATaGAGATTGTTTAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLTSMPR*RLFRMF
Trigger: AAACATCCTAAACAATCTTCATCGAGGCATCGAGGT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395127.6
CDS-3UTR TCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATCCCGTAGGTCTGTaGAAAAATGAAGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLHPVGL*KNEEVQ
Trigger: CTGAACTTCTTCATTTTTTCACAGACCTACGGGATG...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAGCGGCCAATTGTTTTaGTTCCTGTTTAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVSGQLF*FLFSRT
Trigger: GGTTCTACTAAACAGGAAGCAAAACAATTGGCCGCT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAGCGGCCAATTGTTTTaGTTCCTGTTTAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSGQLF*FLFSRT
Trigger: GGTTCTACTAAACAGGAAGCAAAACAATTGGCCGCT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGATTCAGAAGCGAGTGTaGTGGTCACTAAAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMIQKRV*WSLKSC
Trigger: GCAACTCTTTAGTGACCAGCACACTCGCTTCTGAAT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGATTCAGAAGCGAGTGTaGTGGTCACTAAAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLIQKRV*WSLKSC
Trigger: GCAACTCTTTAGTGACCAGCACACTCGCTTCTGAAT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTATTCAGAAGCGAGTGTaGTGGTCACTAAAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFIQKRV*WSLKSC
Trigger: GCAACTCTTTAGTGACCAGCACACTCGCTTCTGAAT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATACATGATCAAGTTTTaGCAATGCTTTTACTTCACG +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARYMIKF*QCFYFT
Trigger: CGTGAAGTAAAAGCATTGGCAAAACTTGATCATGTA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTCTTGCTTCCTCTCTTaGCATATGATCTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLSCFLS*HMISAH
Trigger: ATGTGCAGAGATCATATGGCAAGAGAGGAAGCAAGA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTGTTGCTGCTATAGTTTaGATGTTTGTCCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPVAAIV*MFVPQN
Trigger: ATTTTGGGGGACAAACATGCAAACTATAGCAGCAAC...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTATGGTAGCTGGTTGCTaGTATAGTTTGCATGTTTGT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPMVAGC*YSLHVC
Trigger: ACAAACATGCAAACTATAGCAGCAACCAGCTACCAT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCATGGTAGCTGGTTGCTaGTATAGTTTGCATGTTTGT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLMVAGC*YSLHVC
Trigger: ACAAACATGCAAACTATAGCAGCAACCAGCTACCAT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACACAGGCATTAGCTACTaGGTCCAGCTTTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENTGISY*VQLLSF
Trigger: AAAAGACAAAAGCTGGACGCAGTAGCTAATGCCTGT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCAATGGCTAATATTTTaGCACATGTGTGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLQWLIF*HMCALF
Trigger: AAAGAGGGCACACATGTGGCAAAATATTAGCCATTG...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAATGGCTAATATTTTaGCACATGTGTGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPQWLIF*HMCALF
Trigger: AAAGAGGGCACACATGTGGCAAAATATTAGCCATTG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAGTATTGATATTTGTTaGAGCTGGGTGATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLSIDIC*SWVMGR
Trigger: TCTACCCATCACCCAGCTGCAACAAATATCAATACT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTAGTATTGATATTTGTTaGAGCTGGGTGATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPSIDIC*SWVMGR
Trigger: TCTACCCATCACCCAGCTGCAACAAATATCAATACT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTACACTGAATATGGGATaGATCATGGAAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFTLNMG*IMEASR
Trigger: TCTGGAGGCTTCCATGATGCATCCCATATTCAGTGT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTATGCCACAGCTGGGATaGACCTTGAAAATATACTCA +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVMPQLG*TLKIYS
Trigger: TGAGTATATTTTCAAGGTGCATCCCAGCTGTGGCAT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTATGCCACAGCTGGGATaGACCTTGAAAATATACTCA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISMPQLG*TLKIYS
Trigger: TGAGTATATTTTCAAGGTGCATCCCAGCTGTGGCAT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCTTTCTTCACAGCAGTaGACTCACTACTTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVLSSQQ*THYFLV
Trigger: TACCAGAAAGTAGTGAGTGCACTGCTGTGAAGAAAG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTTTCTTCACAGCAGTaGACTCACTACTTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISLSSQQ*THYFLV
Trigger: TACCAGAAAGTAGTGAGTGCACTGCTGTGAAGAAAG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCATAATCACGGAAGTGTaGATGTTGATTCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLIITEV*MLILKT
Trigger: GGTCTTCAGAATCAACATCCACACTTCCGTGATTAT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679979.1
ENST00000680273.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTATAATCACGGAAGTGTaGATGTTGATTCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPIITEV*MLILKT
Trigger: GGTCTTCAGAATCAACATCCACACTTCCGTGATTAT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679979.1
ENST00000680273.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGTTAGTCTTTTCTTCTaGGCAATTCTATTGATAAGG +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARVSLFF*AILLIR
Trigger: CCTTATCAATAGAATTGCCCAGAAGAAAAGACTAAC...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTACTAAAGAGTTGCTTTaGGACTCACACGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISTKELL*DSHVVA
Trigger: TGCTACTACGTGTGAGTCCCAAAGCAACTCTTTAGT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACACTAAAGAGTTGCTTTaGGACTCACACGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENTKELL*DSHVVA
Trigger: TGCTACTACGTGTGAGTCCCAAAGCAACTCTTTAGT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCAGAAGCGAGTGTGCTaGTCACTAAAGAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLQKRVC*SLKSCF
Trigger: AAAGCAACTCTTTAGTGACCAGCACACTCGCTTCTG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTATTTAAAAAGAGCCTaGCACCTTCTCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMYLKRA*HLLPRS
Trigger: AGAGCGAGGGAGAAGGTGCCAGGCTCTTTTTAAATA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTATTTAAAAAGAGCCTaGCACCTTCTCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFYLKRA*HLLPRS
Trigger: AGAGCGAGGGAGAAGGTGCCAGGCTCTTTTTAAATA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTATTAACCTGGAGTGGTaGCAGATACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFINLEW*QIPVIP
Trigger: TGGGATTACAGGTATCTGCCACCACTCCAGGTTAAT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATACATTCTCACTAACTaGCCACATCATTTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEYILTN*PHHLVF
Trigger: AAACACTAAATGATGTGGCCAGTTAGTGAGAATGTA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACACAAATTATGTAGCTaGCCATACACACACATGCAC +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLHKLCS*PYTHMH
Trigger: GTGCATGTGTGTGTATGGCCAGCTACATAATTTGTG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCACAAATTATGTAGCTaGCCATACACACACATGCAC +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLHKLCS*PYTHMH
Trigger: GTGCATGTGTGTGTATGGCCAGCTACATAATTTGTG...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCAGATAGTAGAGACCTaGAAAAGCTTGTATGTAGCC +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLQIVET*KSLYVA
Trigger: GGCTACATACAAGCTTTTCCAGGTCTCTACTATCTG...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACAGATAGTAGAGACCTaGAAAAGCTTGTATGTAGCC +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLQIVET*KSLYVA
Trigger: GGCTACATACAAGCTTTTCCAGGTCTCTACTATCTG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTATGGTGAACACTCAGTaGGGACTGCATATTGTGAGT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFMVNTQ*GLHIVS
Trigger: ACTCACAATATGCAGTCCCCACTGAGTGTTCACCAT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGATGGTGAACACTCAGTaGGGACTGCATATTGTGAGT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMMVNTQ*GLHIVS
Trigger: ACTCACAATATGCAGTCCCCACTGAGTGTTCACCAT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCAGTCAAATCCTGAGTaGAGGAAATTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLQSNPE*RKFHRT
Trigger: TGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCAGTCAAATCCTGAGTaGAGGAAATTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMQSNPE*RKFHRT
Trigger: TGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATTTCAAAGTATTGGTTaGGCCATACCTTGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEFQSIG*AIPCFK
Trigger: TTTAAAGCAAGGTATGGCCCAACCAATACTTTGAAA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCTAGTTTCAAAGTATTaGTTGGGCCATACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPLVSKY*LGHTLL
Trigger: AAGCAAGGTATGGCCCAACCAATACTTTGAAACTAG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACGTTGCCAACTCCTCTTaGTTCTGTCCTCTTATTGTT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENVANSS*FCPLIV
Trigger: AACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATTGTATTTACTTGAATaGCATCAGAATCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAELYLLE*HQNPAT
Trigger: AGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCTCACTGTCACCAAATaGGATTCAACGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLTVTK*DSTSFL
Trigger: GAGGAAAGACGTTGAATCCCATTTGGTGACAGTGAG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCTCACTGTCACCAAATaGGATTCAACGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFLTVTK*DSTSFL
Trigger: GAGGAAAGACGTTGAATCCCATTTGGTGACAGTGAG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAAGATTCATTTTGAGTaGGAGATGTTGGAACACTTT +
Preference number: 4 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARKIHFE*EMLEHF
Trigger: AAAGTGTTCCAACATCTCCCACTCAAAATGAATCTT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAAGATTCATTTTGAGTaGGAGATGTTGGAACACTTT +
Preference number: 4 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEKIHFE*EMLEHF
Trigger: AAAGTGTTCCAACATCTCCCACTCAAAATGAATCTT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CAA 72 bp ATAATGTTAGGGTGTTCCACCTTGGGTGATGCTAAATaGAATCACTTGGTTATTGTGGTGACCATTGTAAAG +
Preference number: 4 (lower is better)
Translates to: IMLGCSTLGDAK*NHLVIVVTIVK
Trigger: CTTTACAATGGTCACCACAATAACCAAGTGATTCAATTTAGCATCACCCAAGGTGGAACACCCTAACATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CAA 72 bp TGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTaGGAGGTAATCTTTGATGCTTACCTTTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: WHQNPATNLLTN*EVIFDAYLSLI
Trigger: GATTAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCGAATTAGGCAGTTCTTaGTATTTAAGTACTACTCCC +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLELGSS*YLSTTP
Trigger: GGGAGTAGTACTTAAATATCAAGAACTGCCTAATTC...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGATCATGTGGAGGTCCTaGATTAGGCAGTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLIMWRS*IRQFLI
Trigger: TATCAAGAACTGCCTAATTCAGGACCTCCACATGAT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGATCATGTGGAGGTCCTaGATTAGGCAGTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMIMWRS*IRQFLI
Trigger: TATCAAGAACTGCCTAATTCAGGACCTCCACATGAT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGGCAGTGTCACATACATaGAGAAGTTCAGCAAGAATT +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLAVSHT*RSSARI
Trigger: AATTCTTGCTGAACTTCTTCATGTATGTGACACTGC...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTGCAGTGTCACATACATaGAGAAGTTCAGCAAGAATT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISAVSHT*RSSARI
Trigger: AATTCTTGCTGAACTTCTTCATGTATGTGACACTGC...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGCAGTGTCACATACATaGAGAAGTTCAGCAAGAATT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVAVSHT*RSSARI
Trigger: AATTCTTGCTGAACTTCTTCATGTATGTGACACTGC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTGTCTGTGAAAAACTTTaGTGTTTCAAAAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPVCEKL*CFKSSV
Trigger: GACACTGCTTTTGAAACATCAAAGTTTTTCACAGAC...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCGTCTGTGAAAAACTTTaGTGTTTCAAAAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLVCEKL*CFKSSV
Trigger: GACACTGCTTTTGAAACATCAAAGTTTTTCACAGAC...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATCCCGTAGGTCTGTaGAAAACTTTGATGTTTCAA +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLHPVGL*KTLMFQ
Trigger: TTGAAACATCAAAGTTTTTCACAGACCTACGGGATG...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACATCCCGTAGGTCTGTaGAAAACTTTGATGTTTCAA +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLHPVGL*KTLMFQ
Trigger: TTGAAACATCAAAGTTTTTCACAGACCTACGGGATG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTCTGCATATATTTTCTaGAAACCTGCTTTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPSAYIF*KPALFA
Trigger: AGCGAACAAAGCAGGTTTTCAGAAAATATATGCAGA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAGTTACCATTACCTTTaGAAGTCCATTTCCCCAATC +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSYHYL*KSISPI
Trigger: GATTGGGGAAATGGACTTTCAAAGGTAATGGTAACT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAGTTACCATTACCTTTaGAAGTCCATTTCCCCAATC +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLSYHYL*KSISPI
Trigger: GATTGGGGAAATGGACTTTCAAAGGTAATGGTAACT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAGTTACCATTACCTTTaGAAGTCCATTTCCCCAATC +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVSYHYL*KSISPI
Trigger: GATTGGGGAAATGGACTTTCAAAGGTAATGGTAACT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCCAAAATCTCATGTTaGAATTTGATCCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISPKISC*NLIPVL
Trigger: CAACACTGGGATCAAATTTCAACATGAGATTTTGGG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACCCAAAATCTCATGTTaGAATTTGATCCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLPKISC*NLIPVL
Trigger: CAACACTGGGATCAAATTTCAACATGAGATTTTGGG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTTTCCCCTGTATAATTaGTACCTCTTCTGTAGGATT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLFPLYN*YLFCRI
Trigger: AATCCTACAGAAGAGGTATCAATTATACAGGGGAAA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTTTCCCCTGTATAATTaGTACCTCTTCTGTAGGATT +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLFPLYN*YLFCRI
Trigger: AATCCTACAGAAGAGGTATCAATTATACAGGGGAAA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTATGACACTGACTTTTTaGGAAGCCCAAGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVMTLTF*EAQVNH
Trigger: ATGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCAT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTATGACACTGACTTTTTaGGAAGCCCAAGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISMTLTF*EAQVNH
Trigger: ATGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCAT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGAAGTTGCAGACATCATaGCACACTTGGCCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMKLQTS*HTWPLN
Trigger: ATTTAGAGGCCAAGTGTGTCATGATGTCTGCAACTT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGGGGGACTGCATATTGTaGGTTATGTCTCTAGTTAGT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMGDCIL*VMSLVS
Trigger: ACTAACTAGAGACATAACTCACAATATGCAGTCCCC...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTTTGTTGCAGCTGGGTaGTGGGTAGAGTTTCATTAT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMFVAAG*WVEFHY
Trigger: ATAATGAAACTCTACCCATCACCCAGCTGCAACAAA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTTTGTTGCAGCTGGGTaGTGGGTAGAGTTTCATTAT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFFVAAG*WVEFHY
Trigger: ATAATGAAACTCTACCCATCACCCAGCTGCAACAAA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAGAACGGTAAAGTATTaGTATTTGTTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVRTVKY*YLLQLG
Trigger: ACCCAGCTGCAACAAATATCAATACTTTACCGTTCT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAGAACGGTAAAGTATTaGTATTTGTTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENRTVKY*YLLQLG
Trigger: ACCCAGCTGCAACAAATATCAATACTTTACCGTTCT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTTGGGGGAAAATAAATaGACCAGGATCAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLGENK*TRIKSS
Trigger: GCTGGATTTGATCCTGGTTCATTTATTTTCCCCCAA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTTGGGGGAAAATAAATaGACCAGGATCAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMLGENK*TRIKSS
Trigger: GCTGGATTTGATCCTGGTTCATTTATTTTCCCCCAA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTTACAACCCCTGAAATaGAATAATGGATCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISLQPLK*NNGSRQ
Trigger: TTGCCTGGATCCATTATTTCATTTCAGGGGTTGTAA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCTTGGAGGTAATCTTTaGTGCTTACCTTTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPLGGNL*CLPFLN
Trigger: ATTAAGGAAAGGTAAGCATCAAAGATTACCTCCAAG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTGGGGTTCATCTGACTaGGACTTGTATTTACTTGAA +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLWGSSD*DLYLLE
Trigger: TTCAAGTAAATACAAGTCTCAGTCAGATGAACCCCA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTGGGGTTCATCTGACTaGGACTTGTATTTACTTGAA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISWGSSD*DLYLLE
Trigger: TTCAAGTAAATACAAGTCTCAGTCAGATGAACCCCA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCTCTTGGGGTTCATCTaGCTGAGACTTGTATTTACT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMLLGFI*LRLVFT
Trigger: AGTAAATACAAGTCTCAGTCAGATGAACCCCAAGAG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGGTTACCTAGAGTTGTaGGAAAACAGAGTGAATACT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVGYLEL*ENRVNT
Trigger: AGTATTCACTCTGTTTTCTCACAACTCTAGGTAACC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTGGTTACCTAGAGTTGTaGGAAAACAGAGTGAATACT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISGYLEL*ENRVNT
Trigger: AGTATTCACTCTGTTTTCTCACAACTCTAGGTAACC...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTCCTTTGATTATTTCTaGGACCATTCACTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLSFDYF*DHSLRF
Trigger: AAACCTCAGTGAATGGTCTCAGAAATAATCAAAGGA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680273.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTAGCGGCCAATTGTTTTaGTTCCTGTTTAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFSGQLF*FLFSRT
Trigger: GGTTCTACTAAACAGGAAGCAAAACAATTGGCCGCT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCAGGATCATAATCACTaGTCTCAAGAGAATCATCAC +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLQDHNH*SQENHH
Trigger: GTGATGATTCTCTTGAGAGCAGTGATTATGATCCTG...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACAGGATCATAATCACTaGTCTCAAGAGAATCATCAC +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLQDHNH*SQENHH
Trigger: GTGATGATTCTCTTGAGAGCAGTGATTATGATCCTG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCAGGATCATAATCACTaGTCTCAAGAGAATCATCAC +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENQDHNH*SQENHH
Trigger: GTGATGATTCTCTTGAGAGCAGTGATTATGATCCTG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTCTGTTTTTAGCTACTaGCTTACAGCACGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMSVFSY*LTARLS
Trigger: AGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACGTTGCTGCTATAGTTTaGATGTTTGTCCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENVAAIV*MFVPQN
Trigger: ATTTTGGGGGACAAACATGCAAACTATAGCAGCAAC...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACATGGTAGCTGGTTGCTaGTATAGTTTGCATGTTTGT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENMVAGC*YSLHVC
Trigger: ACAAACATGCAAACTATAGCAGCAACCAGCTACCAT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGACAGGCATTAGCTACTaGGTCCAGCTTTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLTGISY*VQLLSF
Trigger: AAAAGACAAAAGCTGGACGCAGTAGCTAATGCCTGT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCTGAACATTGAAAGTTaGAGACATCATGACACACTT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPLNIES*RHHDTL
Trigger: AAGTGTGTCATGATGTCTGCAACTTTCAATGTTCAG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACAATGGCTAATATTTTaGCACATGTGTGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLQWLIF*HMCALF
Trigger: AAAGAGGGCACACATGTGGCAAAATATTAGCCATTG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCAATGGCTAATATTTTaGCACATGTGTGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVQWLIF*HMCALF
Trigger: AAAGAGGGCACACATGTGGCAAAATATTAGCCATTG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCAATGGCTAATATTTTaGCACATGTGTGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENQWLIF*HMCALF
Trigger: AAAGAGGGCACACATGTGGCAAAATATTAGCCATTG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTAGTATTGATATTTGTTaGAGCTGGGTGATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISSIDIC*SWVMGR
Trigger: TCTACCCATCACCCAGCTGCAACAAATATCAATACT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAGTATTGATATTTGTTaGAGCTGGGTGATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLSIDIC*SWVMGR
Trigger: TCTACCCATCACCCAGCTGCAACAAATATCAATACT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCTTTCTTCACAGCAGTaGACTCACTACTTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFLSSQQ*THYFLV
Trigger: TACCAGAAAGTAGTGAGTGCACTGCTGTGAAGAAAG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTCTACCTTCACCTTCTaGAAATTCTCTTCCATCTAT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPSTFTF*KFSSIY
Trigger: ATAGATGGAAGAGAATTTCCAGAAGGTGAAGGTAGA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTCTACCTTCACCTTCTaGAAATTCTCTTCCATCTAT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLSTFTF*KFSSIY
Trigger: ATAGATGGAAGAGAATTTCCAGAAGGTGAAGGTAGA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAGAGAATCATCACTaGTCTCAGGATCATAATCAA +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPQENHH*SQDHNQ
Trigger: TTGATTATGATCCTGAGACCAGTGATGATTCTCTTG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAAAAATTAACCTGGAGTaGTGGCAGATACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLKINLE*WQIPVI
Trigger: GATTACAGGTATCTGCCACCACTCCAGGTTAATTTT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGGAGTTCAAAACCAGCTaGGTCAACATGGTGAAATTC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMEFKTS*VNMVKF
Trigger: GAATTTCACCATGTTGACCCAGCTGGTTTTGAACTC...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTGAGTTCAAAACCAGCTaGGTCAACATGGTGAAATTC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFEFKTS*VNMVKF
Trigger: GAATTTCACCATGTTGACCCAGCTGGTTTTGAACTC...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCACAAATTATGTAGCTaGCCATACACACACATGCAC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFHKLCS*PYTHMH
Trigger: GTGCATGTGTGTGTATGGCCAGCTACATAATTTGTG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCAGATAGTAGAGACCTaGAAAAGCTTGTATGTAGCC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMQIVET*KSLYVA
Trigger: GGCTACATACAAGCTTTTCCAGGTCTCTACTATCTG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCAGATAGTAGAGACCTaGAAAAGCTTGTATGTAGCC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFQIVET*KSLYVA
Trigger: GGCTACATACAAGCTTTTCCAGGTCTCTACTATCTG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGATTAGTTGGGTGTGTTaGTGTATGCATGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLISWVC*CMHVVP
Trigger: TGGGACTACATGCATACACCAACACACCCAACTAAT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTAAACTTTGTAGTAGTTaGTACCACCAGAACTCATTG +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPKLCSS*YHQNSL
Trigger: CAATGAGTTCTGGTGGTACCAACTACTACAAAGTTT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAAACTTTGTAGTAGTTaGTACCACCAGAACTCATTG +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLKLCSS*YHQNSL
Trigger: CAATGAGTTCTGGTGGTACCAACTACTACAAAGTTT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCTAGTTTCAAAGTATTaGTTGGGCCATACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENLVSKY*LGHTLL
Trigger: AAGCAAGGTATGGCCCAACCAATACTTTGAAACTAG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCTAGTTTCAAAGTATTaGTTGGGCCATACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVLVSKY*LGHTLL
Trigger: AAGCAAGGTATGGCCCAACCAATACTTTGAAACTAG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGAGTTAACATTTCAGTaGAGACCTTTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLELTFQ*RPFLSC
Trigger: ACAAGATAGGAAAGGTCTCCACTGAAATGTTAACTC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTGAGTTAACATTTCAGTaGAGACCTTTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPELTFQ*RPFLSC
Trigger: ACAAGATAGGAAAGGTCTCCACTGAAATGTTAACTC...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCCATCAGCTGATGAATaGATACATAAAATGCGACAT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPPSADE*IHKMRH
Trigger: ATGTCGCATTTTATGTATCCATTCATCAGCTGATGG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGGCACTCACTACTTTCTaGTATACAAGAAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLALTTF*YTRRTA
Trigger: AGCTGTTCTTCTTGTATACCAGAAAGTAGTGAGTGC...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGAATTAGGCAGTTCTTaGTATTTAAGTACTACTCCC +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVELGSS*YLSTTP
Trigger: GGGAGTAGTACTTAAATATCAAGAACTGCCTAATTC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACGAATTAGGCAGTTCTTaGTATTTAAGTACTACTCCC +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENELGSS*YLSTTP
Trigger: GGGAGTAGTACTTAAATATCAAGAACTGCCTAATTC...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGGAATTAGGCAGTTCTTaGTATTTAAGTACTACTCCC +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLELGSS*YLSTTP
Trigger: GGGAGTAGTACTTAAATATCAAGAACTGCCTAATTC...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGGCAGTGTCACATACATaGAGAAGTTCAGCAAGAATT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMAVSHT*RSSARI
Trigger: AATTCTTGCTGAACTTCTTCATGTATGTGACACTGC...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGTCTGTGAAAAACTTTaGTGTTTCAAAAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVVCEKL*CFKSSV
Trigger: GACACTGCTTTTGAAACATCAAAGTTTTTCACAGAC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCATCCCGTAGGTCTGTaGAAAACTTTGATGTTTCAA +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMHPVGL*KTLMFQ
Trigger: TTGAAACATCAAAGTTTTTCACAGACCTACGGGATG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCCCAAAATCTCATGTTaGAATTTGATCCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFPKISC*NLIPVL
Trigger: CAACACTGGGATCAAATTTCAACATGAGATTTTGGG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCCCAAAATCTCATGTTaGAATTTGATCCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLPKISC*NLIPVL
Trigger: CAACACTGGGATCAAATTTCAACATGAGATTTTGGG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTTTCCCCTGTATAATTaGTACCTCTTCTGTAGGATT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISFPLYN*YLFCRI
Trigger: AATCCTACAGAAGAGGTATCAATTATACAGGGGAAA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTGGGTGATGCTAAATTaGATCACTTGGTTATTGTGG +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMWVMLN*ITWLLW
Trigger: CCACAATAACCAAGTGATTCAATTTAGCATCACCCA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGAGAACGGTAAAGTATTaGTATTTGTTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMRTVKY*YLLQLG
Trigger: ACCCAGCTGCAACAAATATCAATACTTTACCGTTCT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTAGAACGGTAAAGTATTaGTATTTGTTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFRTVKY*YLLQLG
Trigger: ACCCAGCTGCAACAAATATCAATACTTTACCGTTCT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTACATCATGTTCCTCCTaGAATGATGTAAGAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISTSCSS*NDVRES
Trigger: ACTTTCTCTTACATCATTTCAGGAGGAACATGATGT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACACATCATGTTCCTCCTaGAATGATGTAAGAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENTSCSS*NDVRES
Trigger: ACTTTCTCTTACATCATTTCAGGAGGAACATGATGT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTTACAACCCCTGAAATaGAATAATGGATCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMLQPLK*NNGSRQ
Trigger: TTGCCTGGATCCATTATTTCATTTCAGGGGTTGTAA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTTACAACCCCTGAAATaGAATAATGGATCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFLQPLK*NNGSRQ
Trigger: TTGCCTGGATCCATTATTTCATTTCAGGGGTTGTAA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACTTGGAGGTAATCTTTaGTGCTTACCTTTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLLGGNL*CLPFLN
Trigger: ATTAAGGAAAGGTAAGCATCAAAGATTACCTCCAAG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTGGTTACCTAGAGTTGTaGGAAAACAGAGTGAATACT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFGYLEL*ENRVNT
Trigger: AGTATTCACTCTGTTTTCTCACAACTCTAGGTAACC...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGGGTTACCTAGAGTTGTaGGAAAACAGAGTGAATACT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMGYLEL*ENRVNT
Trigger: AGTATTCACTCTGTTTTCTCACAACTCTAGGTAACC...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCAGGATCATAATCACTaGTCTCAAGAGAATCATCAC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMQDHNH*SQENHH
Trigger: GTGATGATTCTCTTGAGAGCAGTGATTATGATCCTG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGTTTCTTGTACAGCCTaGAGAACTGTAAGTCATATA +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVVSCTA*RTVSHI
Trigger: TATATGACTTACAGTTCTGCAGGCTGTACAAGAAAC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAGTTTCTTGTACAGCCTaGAGAACTGTAAGTCATATA +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLVSCTA*RTVSHI
Trigger: TATATGACTTACAGTTCTGCAGGCTGTACAAGAAAC...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTGTTGCTGCTATAGTTTaGATGTTTGTCCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFVAAIV*MFVPQN
Trigger: ATTTTGGGGGACAAACATGCAAACTATAGCAGCAAC...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTATGGTAGCTGGTTGCTaGTATAGTTTGCATGTTTGT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFMVAGC*YSLHVC
Trigger: ACAAACATGCAAACTATAGCAGCAACCAGCTACCAT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCTGAACATTGAAAGTTaGAGACATCATGACACACTT +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLLNIES*RHHDTL
Trigger: AAGTGTGTCATGATGTCTGCAACTTTCAATGTTCAG...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCTGAACATTGAAAGTTaGAGACATCATGACACACTT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVLNIES*RHHDTL
Trigger: AAGTGTGTCATGATGTCTGCAACTTTCAATGTTCAG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTGACACATCAACCAAATaGAATGTTGGATCTAGATTT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPDTSTK*NVGSRF
Trigger: AAATCTAGATCCAACATTGCATTTGGTTGATGTGTC...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGAGAAGCATTTTATTTaGCTCACAGTTTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLEKHFI*LTVLPI
Trigger: AATAGGCAAAACTGTGAGGCAAATAAAATGCTTCTC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCGAGAAGCATTTTATTTaGCTCACAGTTTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLEKHFI*LTVLPI
Trigger: AATAGGCAAAACTGTGAGGCAAATAAAATGCTTCTC...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTATAATGAAGAAAAGTaGTGTGTAGGAATGACTGAG +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLYNEEK*CVGMTE
Trigger: CTCAGTCATTCCTACACAGCACTTTTCTTCATTATA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGATAATCACGGAAGTGTaGATGTTGATTCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLIITEV*MLILKT
Trigger: GGTCTTCAGAATCAACATCCACACTTCCGTGATTAT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233057.9
ENST00000679979.1
ENST00000680273.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTATAATCACGGAAGTGTaGATGTTGATTCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFIITEV*MLILKT
Trigger: GGTCTTCAGAATCAACATCCACACTTCCGTGATTAT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679979.1
ENST00000680273.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCAAGAGAATCATCACTaGTCTCAGGATCATAATCAA +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENQENHH*SQDHNQ
Trigger: TTGATTATGATCCTGAGACCAGTGATGATTCTCTTG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTCACAGAATTCCATTTaGATGAAAAGGCACTTAGTC +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISSQNSI*MKRHLV
Trigger: GACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTCACAGAATTCCATTTaGATGAAAAGGCACTTAGTC +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSQNSI*MKRHLV
Trigger: GACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTCACAGAATTCCATTTaGATGAAAAGGCACTTAGTC +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLSQNSI*MKRHLV
Trigger: GACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTAAAATTAACCTGGAGTaGTGGCAGATACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFKINLE*WQIPVI
Trigger: GATTACAGGTATCTGCCACCACTCCAGGTTAATTTT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGAAAATTAACCTGGAGTaGTGGCAGATACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMKINLE*WQIPVI
Trigger: GATTACAGGTATCTGCCACCACTCCAGGTTAATTTT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTACATTCTCACTAACTaGCCACATCATTTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLYILTN*PHHLVF
Trigger: AAACACTAAATGATGTGGCCAGTTAGTGAGAATGTA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTACATTCTCACTAACTaGCCACATCATTTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLYILTN*PHHLVF
Trigger: AAACACTAAATGATGTGGCCAGTTAGTGAGAATGTA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACCTATGGAGTATTCTTaGGGGAAAATAAATGAACCA +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLPMEYS*GKINEP
Trigger: TGGTTCATTTATTTTCCCCCAAGAATACTCCATAGG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAAACTTTGTAGTAGTTaGTACCACCAGAACTCATTG +
Preference number: 4 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLKLCSS*YHQNSL
Trigger: CAATGAGTTCTGGTGGTACCAACTACTACAAAGTTT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTTTCAAAGTATTGGTTaGGCCATACCTTGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLFQSIG*AIPCFK
Trigger: TTTAAAGCAAGGTATGGCCCAACCAATACTTTGAAA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCTAGTTTCAAAGTATTaGTTGGGCCATACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMLVSKY*LGHTLL
Trigger: AAGCAAGGTATGGCCCAACCAATACTTTGAAACTAG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTTGTATTTACTTGAATaGCATCAGAATCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLLYLLE*HQNPAT
Trigger: AGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTTGTATTTACTTGAATaGCATCAGAATCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPLYLLE*HQNPAT
Trigger: AGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGAGTTAACATTTCAGTaGAGACCTTTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVELTFQ*RPFLSC
Trigger: ACAAGATAGGAAAGGTCTCCACTGAAATGTTAACTC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAGAGTTAACATTTCAGTaGAGACCTTTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLELTFQ*RPFLSC
Trigger: ACAAGATAGGAAAGGTCTCCACTGAAATGTTAACTC...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCATCAGCTGATGAATaGATACATAAAATGCGACAT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISPSADE*IHKMRH
Trigger: ATGTCGCATTTTATGTATCCATTCATCAGCTGATGG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTTGAGTGGGAGATGTTaGAACACTTTGGAAATAACA +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVLSGRC*NTLEIT
Trigger: TGTTATTTCCAAAGTGTTCCAACATCTCCCACTCAA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTTGAGTGGGAGATGTTaGAACACTTTGGAAATAACA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISLSGRC*NTLEIT
Trigger: TGTTATTTCCAAAGTGTTCCAACATCTCCCACTCAA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGGCACTCACTACTTTCTaGTATACAAGAAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLALTTF*YTRRTA
Trigger: AGCTGTTCTTCTTGTATACCAGAAAGTAGTGAGTGC...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTGAATTAGGCAGTTCTTaGTATTTAAGTACTACTCCC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFELGSS*YLSTTP
Trigger: GGGAGTAGTACTTAAATATCAAGAACTGCCTAATTC...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGGTCTGTGAAAAACTTTaGTGTTTCAAAAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMVCEKL*CFKSSV
Trigger: GACACTGCTTTTGAAACATCAAAGTTTTTCACAGAC...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTTTCCCCTGTATAATTaGTACCTCTTCTGTAGGATT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMFPLYN*YLFCRI
Trigger: AATCCTACAGAAGAGGTATCAATTATACAGGGGAAA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCTTGGAGGTAATCTTTaGTGCTTACCTTTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLGGNL*CLPFLN
Trigger: ATTAAGGAAAGGTAAGCATCAAAGATTACCTCCAAG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR TCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCTTGGAGGTAATCTTTaGTGCTTACCTTTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMLGGNL*CLPFLN
Trigger: ATTAAGGAAAGGTAAGCATCAAAGATTACCTCCAAG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACATTCTTCTTTTGATGTaGATTATGGTTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENILLLM*IMVVPC
Trigger: ACAGGGAACAACCATAATGCACATCAAAAGAAGAAT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTGTTTCTTGTACAGCCTaGAGAACTGTAAGTCATATA +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFVSCTA*RTVSHI
Trigger: TATATGACTTACAGTTCTGCAGGCTGTACAAGAAAC...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGGTTTCTTGTACAGCCTaGAGAACTGTAAGTCATATA +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMVSCTA*RTVSHI
Trigger: TATATGACTTACAGTTCTGCAGGCTGTACAAGAAAC...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCTGAACATTGAAAGTTaGAGACATCATGACACACTT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMLNIES*RHHDTL
Trigger: AAGTGTGTCATGATGTCTGCAACTTTCAATGTTCAG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGACACATCAACCAAATaGAATGTTGGATCTAGATTT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVDTSTK*NVGSRF
Trigger: AAATCTAGATCCAACATTGCATTTGGTTGATGTGTC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTGAGAAGCATTTTATTTaGCTCACAGTTTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVEKHFI*LTVLPI
Trigger: AATAGGCAAAACTGTGAGGCAAATAAAATGCTTCTC...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTGAGAAGCATTTTATTTaGCTCACAGTTTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISEKHFI*LTVLPI
Trigger: AATAGGCAAAACTGTGAGGCAAATAAAATGCTTCTC...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTATAATGAAGAAAAGTaGTGTGTAGGAATGACTGAG +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVYNEEK*CVGMTE
Trigger: CTCAGTCATTCCTACACAGCACTTTTCTTCATTATA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATATAATGAAGAAAAGTaGTGTGTAGGAATGACTGAG +
Preference number: 4 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLYNEEK*CVGMTE
Trigger: CTCAGTCATTCCTACACAGCACTTTTCTTCATTATA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTCTACCTTCACCTTCTaGAAATTCTCTTCCATCTAT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFSTFTF*KFSSIY
Trigger: ATAGATGGAAGAGAATTTCCAGAAGGTGAAGGTAGA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCAAGAGAATCATCACTaGTCTCAGGATCATAATCAA +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLQENHH*SQDHNQ
Trigger: TTGATTATGATCCTGAGACCAGTGATGATTCTCTTG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTCACAGAATTCCATTTaGATGAAAAGGCACTTAGTC +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFSQNSI*MKRHLV
Trigger: GACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTACATTCTCACTAACTaGCCACATCATTTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISYILTN*PHHLVF
Trigger: AAACACTAAATGATGTGGCCAGTTAGTGAGAATGTA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCCTATGGAGTATTCTTaGGGGAAAATAAATGAACCA +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFPMEYS*GKINEP
Trigger: TGGTTCATTTATTTTCCCCCAAGAATACTCCATAGG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGAAACTTTGTAGTAGTTaGTACCACCAGAACTCATTG +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMKLCSS*YHQNSL
Trigger: CAATGAGTTCTGGTGGTACCAACTACTACAAAGTTT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTTTCAAAGTATTGGTTaGGCCATACCTTGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENFQSIG*AIPCFK
Trigger: TTTAAAGCAAGGTATGGCCCAACCAATACTTTGAAA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTTTCAAAGTATTGGTTaGGCCATACCTTGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISFQSIG*AIPCFK
Trigger: TTTAAAGCAAGGTATGGCCCAACCAATACTTTGAAA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTTGTATTTACTTGAATaGCATCAGAATCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVLYLLE*HQNPAT
Trigger: AGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGGAGTTAACATTTCAGTaGAGACCTTTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLELTFQ*RPFLSC
Trigger: ACAAGATAGGAAAGGTCTCCACTGAAATGTTAACTC...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTTGAGTGGGAGATGTTaGAACACTTTGGAAATAACA +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLLSGRC*NTLEIT
Trigger: TGTTATTTCCAAAGTGTTCCAACATCTCCCACTCAA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAAGATTCATTTTGAGTaGGAGATGTTGGAACACTTT +
Preference number: 4 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENKIHFE*EMLEHF
Trigger: AAAGTGTTCCAACATCTCCCACTCAAAATGAATCTT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAAGATTCATTTTGAGTaGGAGATGTTGGAACACTTT +
Preference number: 4 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVKIHFE*EMLEHF
Trigger: AAAGTGTTCCAACATCTCCCACTCAAAATGAATCTT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
3UTR CAA 72 bp ATGGACATTCTTGTAAGCACGTATGTAGGAATAGAATaGATAGCTATGTGGGTATACATGGATTCAACTTTA +
Preference number: 4 (lower is better)
Translates to: MDILVSTYVGIE*IAMWVYMDSTL
Trigger: TAAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTGCTTACAAGAATGTCCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTACATGATCAAGTTTTaGCAATGCTTTTACTTCACG +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMYMIKF*QCFYFT
Trigger: CGTGAAGTAAAAGCATTGGCAAAACTTGATCATGTA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTACATGATCAAGTTTTaGCAATGCTTTTACTTCACG +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFYMIKF*QCFYFT
Trigger: CGTGAAGTAAAAGCATTGGCAAAACTTGATCATGTA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGATTCTTCTTTTGATGTaGATTATGGTTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMILLLM*IMVVPC
Trigger: ACAGGGAACAACCATAATGCACATCAAAAGAAGAAT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTGACACATCAACCAAATaGAATGTTGGATCTAGATTT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFDTSTK*NVGSRF
Trigger: AAATCTAGATCCAACATTGCATTTGGTTGATGTGTC...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR GCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGGACACATCAACCAAATaGAATGTTGGATCTAGATTT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMDTSTK*NVGSRF
Trigger: AAATCTAGATCCAACATTGCATTTGGTTGATGTGTC...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGGTTAGTCTTTTCTTCTaGGCAATTCTATTGATAAGG +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMVSLFF*AILLIR
Trigger: CCTTATCAATAGAATTGCCCAGAAGAAAAGACTAAC...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGGTTAGTCTTTTCTTCTaGGCAATTCTATTGATAAGG +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLVSLFF*AILLIR
Trigger: CCTTATCAATAGAATTGCCCAGAAGAAAAGACTAAC...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTGTTAGTCTTTTCTTCTaGGCAATTCTATTGATAAGG +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFVSLFF*AILLIR
Trigger: CCTTATCAATAGAATTGCCCAGAAGAAAAGACTAAC...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTACATTCTCACTAACTaGCCACATCATTTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFYILTN*PHHLVF
Trigger: AAACACTAAATGATGTGGCCAGTTAGTGAGAATGTA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTACATTCTCACTAACTaGCCACATCATTTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLYILTN*PHHLVF
Trigger: AAACACTAAATGATGTGGCCAGTTAGTGAGAATGTA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTTTCAAAGTATTGGTTaGGCCATACCTTGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLFQSIG*AIPCFK
Trigger: TTTAAAGCAAGGTATGGCCCAACCAATACTTTGAAA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTTGTATTTACTTGAATaGCATCAGAATCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFLYLLE*HQNPAT
Trigger: AGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTTGTATTTACTTGAATaGCATCAGAATCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMLYLLE*HQNPAT
Trigger: AGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CCA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAAGATTCATTTTGAGTaGGAGATGTTGGAACACTTT +
Preference number: 4 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLKIHFE*EMLEHF
Trigger: AAAGTGTTCCAACATCTCCCACTCAAAATGAATCTT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS CCA 90 bp GCGCGAGAGGCACTGGCGGGCGGGCTTGGCACCGGCGGGCGGGCTTaGCACCGGCAGGCGGGCTTGGCACCCACGTGCTGCCCCTGCACG +
Preference number: 5 (lower is better)
Translates to: AREALAGGLGTGGRA*HRQAGLAPTCCPCT
Trigger: CGTGCAGGGGCAGCACGTGGGTGCCAAGCCCGCCTGCCGGTGCCAAGCCCGCCCGCCGGTGCCAAGCCCGCCCGCCAGTGCCTCTCGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CCA 90 bp GGCGCTGGATCCAGAGTGCGCGCGAGAGGCACTGGCGGGCGGGCTTaGCACCGGCGGGCGGGCTTGGCACCGGCAGGCGGGCTTGGCACC +
Preference number: 5 (lower is better)
Translates to: GAGSRVRARGTGGRA*HRRAGLAPAGGLGT
Trigger: GGTGCCAAGCCCGCCTGCCGGTGCCAAGCCCGCCCGCCGGTGCCAAGCCCGCCCGCCAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CCA 90 bp CCGCCGCCGCCGCCGCCGGCCGGAGACCCGCGGCTTCGGGAGAGCTaGTTCTCAGTTTCGTTTTCCCCTTGGACTCCGCCTTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: PPPPPPAGDPRLRES*FSVSFSPWTPPSLQ
Trigger: CTGCAGGGAAGGCGGAGTCCAAGGGGAAAACGAAACTGAGAACCAGCTCTCCCGAAGCCGCGGGTCTCCGGCCGGCGGCGGCGGCGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395127.6
ENST00000681463.1
ENST00000681507.1
CDS CCA 90 bp ATTGGGGTAAATTGGCGCTGGATCCAGAGTGCGCGCGAGAGGCACTaGCGGGCGGGCTTGGCACCGGCGGGCGGGCTTGGCACCGGCAGG +
Preference number: 5 (lower is better)
Translates to: IGVNWRWIQSARERH*RAGLAPAGGLGTGR
Trigger: CCTGCCGGTGCCAAGCCCGCCCGCCGGTGCCAAGCCCGCCCGCCAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCCAATTTACCCCAAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS GCA 90 bp AGAAACCTGCTGAAAGATCACCAGCCATTTCTTCTTCCCGTATCCTaGGCCGCCGCCGCCGCCGCCGCCGCCGCCGGCCGGAGACCCGCG +
Preference number: 5 (lower is better)
Translates to: RNLLKDHQPFLLPVS*AAAAAAAAAGRRPA
Trigger: CGCGGGTCTCCGGCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCAGGATACGGGAAGAAGAAATGGCTGGTGATCTTTCAGCAGGTTTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679507.1
CDS GCA 90 bp CCTCGTCTGCTACGGGATTGGGGTAAATTGGCGCTGGATCCAGAGTaGGCGCGAGAGGCACTGGCGGGCGGGCTTGGCACCGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: PRLLRDWGKLALDPE*AREALAGGLGTGGR
Trigger: CCGCCCGCCGGTGCCAAGCCCGCCCGCCAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCCAATTTACCCCAATCCCGTAGCAGACGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CCA 90 bp CCCCCTCTCGCACAAGCCCTCGTCTGCTACGGGATTGGGGTAAATTaGCGCTGGATCCAGAGTGCGCGCGAGAGGCACTGGCGGGCGGGC +
Preference number: 5 (lower is better)
Translates to: PPLAQALVCYGIGVN*RWIQSARERHWRAG
Trigger: GCCCGCCCGCCAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCCAATTTACCCCAATCCCGTAGCAGACGAGGGCTTGTGCGAGAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CCA 90 bp AGCCGCCCGGCCCCCTCTCGCACAAGCCCTCGTCTGCTACGGGATTaGGGTAAATTGGCGCTGGATCCAGAGTGCGCGCGAGAGGCACTG +
Preference number: 5 (lower is better)
Translates to: SRPAPSRTSPRLLRD*GKLALDPECAREAL
Trigger: CAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCCAATTTACCCCAATCCCGTAGCAGACGAGGGCTTGTGCGAGAGGGGGCCGGGCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CCA 90 bp CTCGCACAAGCCCTCGTCTGCTACGGGATTGGGGTAAATTGGCGCTaGATCCAGAGTGCGCGCGAGAGGCACTGGCGGGCGGGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LAQALVCYGIGVNWR*IQSARERHWRAGLA
Trigger: TGCCAAGCCCGCCCGCCAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCCAATTTACCCCAATCCCGTAGCAGACGAGGGCTTGTGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCACCGGCAGGCGGGCTaGGCACCCACGTGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQHRQAG*APTCCP
Trigger: GGGGCAGCACGTGGGTGCCAAGCCCGCCTGCCGGTG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS-3UTR CAA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCCCTGATGGGAGGTGTTaGGGTCATGGGGGAAGACCC +
Preference number: 5 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCPDGRC*GHGGRP
Trigger: GGGTCTTCCCCCATGACCCAAACACCTCCCATCAGG...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCGGGATTGGGGTAAATaGGCGCTGGATCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYRDWGK*ALDPEC
Trigger: GCACTCTGGATCCAGCGCCAATTTACCCCAATCCCG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAATTTGATCCCAGTGTaGGAGGTGGGGCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYNLIPV*EVGPDG
Trigger: CCCATCAGGCCCCACCTCCAACACTGGGATCAAATT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAGTTTCGTTTTCCCCTaGGACTCCGCCTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSFVFP*DSAFPA
Trigger: TGCAGGGAAGGCGGAGTCCAAGGGGAAAACGAAACT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000681463.1
ENST00000681507.1
CDS CCA 90 bp CAAACTGAATTTGCTCCAGAAACCAGGGGTCCTGCCGCTCGTAAGTaGCAAAGCCAGGATTCAGTTCAAGTCGGGGCCTGTAAACACCAA +
Preference number: 5 (lower is better)
Translates to: QTEFAPETRGPAARK*QSQDSVQVGACKHQ
Trigger: TTGGTGTTTACAGGCCCCGACTTGAACTGAATCCTGGCTTTGCCACTTACGAGCGGCAGGACCCCTGGTTTCTGGAGCAAATTCAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681329.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAGCCATCCTCCCCTTTaGACCTCCCAAAAATGCTGG +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSHPPL*TSQKCW
Trigger: CCAGCATTTTTGGGAGGTCAAAAGGGGAGGATGGCT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCAGAAACTGCAGACATaGAGGCCTGGATGGCCGTTT +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYQKLQT*RPGWPF
Trigger: AAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCTG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAGGCAGGAGAATCACTaGAACCCAAGAGGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYRQENH*NPRGRS
Trigger: ACTTCTGCCTCTTGGGTTCAAGTGATTCTCCTGCCT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCCTGATGGGAGGTGTTaGGGTCATGGGGGAAGACCC +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQPDGRC*GHGGRP
Trigger: GGGTCTTCCCCCATGACCCAAACACCTCCCATCAGG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS TCA 90 bp CTGCTTCTGACGGTATGTATTAAGTTCCTCCATGAAGAAACCTGCTaGAAGATCACCAGCCATTTCTTCTTCCCGTATCCTGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LLLTVCIKFLHEETC*KITSHFFFPYPAPP
Trigger: CGGCGGCGCAGGATACGGGAAGAAGAAATGGCTGGTGATCTTTCAGCAGGTTTCTTCATGGAGGAACTTAATACATACCGTCAGAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679507.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCTGGTCACTAAAGAGTaGCTTTGGGACTCACACGTA +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYLVTKE*LWDSHV
Trigger: TACGTGTGAGTCCCAAAGCAACTCTTTAGTGACCAG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTTACAAGAAGAACAGCTaGTCCCCACTCTTACAGTGT +
Preference number: 5 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPYKKNS*SPLLQC
Trigger: ACACTGTAAGAGTGGGGACAAGCTGTTCTTCTTGTA...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTTCCATGCCAAACCTCTaGTCCACAGTATACTTTGTT +
Preference number: 5 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPSMPNL*STVYFV
Trigger: AACAAAGTATACTGTGGACAAGAGGTTTGGCATGGA...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAACAATTGCCCTAAGTaGAAATTCACCCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCNNCPK*KFTLRV
Trigger: GACCCTGAGGGTGAATTTCAACTTAGGGCAATTGTT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACGGTTGCTGCTATAGTTaGCATGTTTGTCCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYGCCYS*HVCPPK
Trigger: TTTTGGGGGACAAACATGCAAACTATAGCAGCAACC...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAGCCATCCTCCCCTTTaGACCTCCCAAAAATGCTGG +
Preference number: 5 (lower is better)
Translates to: VANSSWFCPLIVQALLVFSHPPL*TSQKCW
Trigger: CCAGCATTTTTGGGAGGTCAAAAGGGGAGGATGGCT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACGGGAGAAGATTCATTTaGAGTGGGAGATGTTGGAAC +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYGRRFI*SGRCWN
Trigger: GTTCCAACATCTCCCACTCAAAATGAATCTTCTCCC...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTCCAAAGCCAAAACTTaGTCTAGTTTCTCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYSKAKT*SSFSPL
Trigger: AAGAGGCGAGAAACTAGACAAAGTTTTGGCTTTGGA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCACCCCTTTTGTTATTaGTTCAAAGAGTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPHPFCY*FKEFQS
Trigger: GCTTTGGAACTCTTTGAACAAATAACAAAAGGGGTG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCTCATGCCAGACCCCTaGTCCAGACTTCCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLLMPDP*SRLPGW
Trigger: CCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAG...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCTCATGCCAGACCCCTaGTCCAGACTTCCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPLMPDP*SRLPGW
Trigger: CCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCCTGATGGGAGGTGTTaGGGTCATGGGGGAAGACCC +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPPDGRC*GHGGRP
Trigger: GGGTCTTCCCCCATGACCCAAACACCTCCCATCAGG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAATTTGATCCCAGTGTaGGAGGTGGGGCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARNLIPV*EVGPDG
Trigger: CCCATCAGGCCCCACCTCCAACACTGGGATCAAATT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTCCCCAAAATCTCATGTaGAAATTTGATCCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPPQNLM*KFDPSV
Trigger: AACACTGGGATCAAATTTCAACATGAGATTTTGGGG...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGCCATCCTCCCCTTTaGACCTCCCAAAAATGCTGG +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQSHPPL*TSQKCW
Trigger: CCAGCATTTTTGGGAGGTCAAAAGGGGAGGATGGCT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGAGACTTGTATTTACTaGAATGGCATCAGAATCCTG +
Preference number: 5 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPETCIY*NGIRIL
Trigger: CAGGATTCTGATGCCATTCAAGTAAATACAAGTCTC...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCAGAAACTGCAGACATaGAGGCCTGGATGGCCGTTT +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQQKLQT*RPGWPF
Trigger: AAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCTG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCGGCATAGGGTTTCTTTaGGGGGTGAGAAAAATGATA +
Preference number: 5 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCGIGFL*GVRKMI
Trigger: TATCATTTTTCTCACCCCCAAAAGAAACCCTATGCC...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAGTTTCGTTTTCCCCTaGGACTCCGCCTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARSFVFP*DSAFPA
Trigger: TGCAGGGAAGGCGGAGTCCAAGGGGAAAACGAAACT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395127.6
ENST00000681463.1
ENST00000681507.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACACGGAAGTGTGGATGTaGATTCTGCGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENTEVWM*ILRRRR
Trigger: GCGGCGGCGGCGCAGAATCAACATCCACACTTCCGT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681463.1
CDS-3UTR CAA 90 bp GAAACACTGAATATGGGATGCATCATGGAAGCCTCCAGAGGAGCATGGCCTTGCAAGTTCCCTTACTCCTaGTTCGCTTTCCATCATTTT +
Preference number: 5 (lower is better)
Translates to: ETLNMGCIMEASRGAWPCKFPYS*FAFHHF
Trigger: AAAATGATGGAAAGCGAACAAGGAGTAAGGGAACTT...GCAAGGCCATGCTCCTCTGGAGGCTTCCATGATGCATCCCATATTCAGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACAAGTTCCCTTACTCCTaGTTCGCTTTCCATCATTTT +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYKFPYS*FAFHHF
Trigger: AAAATGATGGAAAGCGAACAAGGAGTAAGGGAACTT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCTAACACCCTGGCATATAGTTGGAAGGCCCACTGGGCTGTCACTTCTAGCCCTGATCCTCAGGTTTCTTaGAGAGTAATTTCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: SNTLAYSWKAHWAVTSSPDPQVS*RVISVE
Trigger: TTCTACAGAAATTACTCTCAAAGAAACCTGAGGATC...AGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCTCATGCCAGACCCCTaGTCCAGACTTCCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLLMPDP*SRLPGW
Trigger: CCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAG...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTCATGCCAGACCCCTaGTCCAGACTTCCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISLMPDP*SRLPGW
Trigger: CCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCTGATGGGAGGTGTTaGGGTCATGGGGGAAGACCC +
Preference number: 5 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISPDGRC*GHGGRP
Trigger: GGGTCTTCCCCCATGACCCAAACACCTCCCATCAGG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCCTGATGGGAGGTGTTaGGGTCATGGGGGAAGACCC +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLPDGRC*GHGGRP
Trigger: GGGTCTTCCCCCATGACCCAAACACCTCCCATCAGG...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAGCCATCCTCCCCTTTaGACCTCCCAAAAATGCTGG +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARSHPPL*TSQKCW
Trigger: CCAGCATTTTTGGGAGGTCAAAAGGGGAGGATGGCT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTTGGCCTCTAAATGTTaGTGCATGCATTGCCTAAAA +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYLASKC*CMHCLK
Trigger: TTTTAGGCAATGCATGCACAAACATTTAGAGGCCAA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACAGAAACTGCAGACATaGAGGCCTGGATGGCCGTTT +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARQKLQT*RPGWPF
Trigger: AAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCTG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTTTGAGTGGGAGATGTaGGAACACTTTGGAAATAAC +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYFEWEM*EHFGNN
Trigger: GTTATTTCCAAAGTGTTCCAACATCTCCCACTCAAA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS TCA 90 bp CTGCTTCTGACGGTATGTATTAAGTTCCTCCATGAAGAAACCTGCTaGAAGATCACCAGCCATTTCTTCTTCCCGTATCCTGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: LLLTVCIKFLHEETC*KITSHFFFPYPGWK
Trigger: CTTCCAACCAGGATACGGGAAGAAGAAATGGCTGGTGATCTTTCAGCAGGTTTCTTCATGGAGGAACTTAATACATACCGTCAGAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000411537.7
ENST00000647926.1
ENST00000679979.1
ENST00000680273.1
ENST00000681329.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCTGGTCACTAAAGAGTaGCTTTGGGACTCACACGTA +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQLVTKE*LWDSHV
Trigger: TACGTGTGAGTCCCAAAGCAACTCTTTAGTGACCAG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACATCACAGAATTCCATTaGGATGAAAAGGCACTTAGT +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYITEFH*DEKALS
Trigger: ACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGAT...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAGGCAGGAGAATCACTaGAACCCAAGAGGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAERQENH*NPRGRS
Trigger: ACTTCTGCCTCTTGGGTTCAAGTGATTCTCCTGCCT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCTCATGCCAGACCCCTaGTCCAGACTTCCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFLMPDP*SRLPGW
Trigger: CCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATTCTCCCTCGCTCTCTaGCTTCCTCTCTTGCCATAT +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARFSLAL*LPLLPY
Trigger: ATATGGCAAGAGAGGAAGCAAGAGAGCGAGGGAGAA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCCTGATGGGAGGTGTTaGGGTCATGGGGGAAGACCC +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMPDGRC*GHGGRP
Trigger: GGGTCTTCCCCCATGACCCAAACACCTCCCATCAGG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAATTTGATCCCAGTGTaGGAGGTGGGGCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLNLIPV*EVGPDG
Trigger: CCCATCAGGCCCCACCTCCAACACTGGGATCAAATT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACTTGGGTGATGCTAAATaGAATCACTTGGTTATTGTG +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYLGDAK*NHLVIV
Trigger: CACAATAACCAAGTGATTCAATTTAGCATCACCCAA...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CTCCCAAACATGCTCTACCTCACCATGTCGATAGATGTACAGTCGCCCCACTACCCATCAGGTGAAAGATaGATGAGAAACTTTGTAGTA +
Preference number: 5 (lower is better)
Translates to: LPNMLYLTMSIDVQSPHYPSGER*MRNFVV
Trigger: TACTACAAAGTTTCTCATCAATCTTTCACCTGATGG...GTAGTGGGGCGACTGTACATCTATCGACATGGTGAGGTAGAGCATGTTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACTGGTCACTAAAGAGTaGCTTTGGGACTCACACGTA +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAELVTKE*LWDSHV
Trigger: TACGTGTGAGTCCCAAAGCAACTCTTTAGTGACCAG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTTCCTTTCCATAGTCTaGCGAAGAAATCTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: VANSSWFCPLIVQALLVFFLSIV*RRNLFW
Trigger: CCAGAACAGATTTCTTCGCAAGACTATGGAAAGGAA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTGCCTTACAGCACGGTaGTCTTTAAAGTGGTTGTTA +
Preference number: 5 (lower is better)
Translates to: VANSSWFCPLIVQALLVFCLTAR*SLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAACAATTGCCCTAAGTaGAAATTCACCCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQNNCPK*KFTLRV
Trigger: GACCCTGAGGGTGAATTTCAACTTAGGGCAATTGTT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAATTTGATCCCAGTGTaGGAGGTGGGGCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENNLIPV*EVGPDG
Trigger: CCCATCAGGCCCCACCTCCAACACTGGGATCAAATT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAAATTTGATCCCAGTGTaGGAGGTGGGGCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLNLIPV*EVGPDG
Trigger: CCCATCAGGCCCCACCTCCAACACTGGGATCAAATT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAATTTGATCCCAGTGTaGGAGGTGGGGCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLNLIPV*EVGPDG
Trigger: CCCATCAGGCCCCACCTCCAACACTGGGATCAAATT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGGTTGCTGCTATAGTTaGCATGTTTGTCCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQGCCYS*HVCPPK
Trigger: TTTTGGGGGACAAACATGCAAACTATAGCAGCAACC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAGCCATCCTCCCCTTTaGACCTCCCAAAAATGCTGG +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLSHPPL*TSQKCW
Trigger: CCAGCATTTTTGGGAGGTCAAAAGGGGAGGATGGCT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCAGCCATCCTCCCCTTTaGACCTCCCAAAAATGCTGG +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLSHPPL*TSQKCW
Trigger: CCAGCATTTTTGGGAGGTCAAAAGGGGAGGATGGCT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGCTAGTTTCAAAGTATaGGTTGGGCCATACCTTGCT +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQASFKV*VGPYLA
Trigger: AGCAAGGTATGGCCCAACCAATACTTTGAAACTAGC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAAACTGCAGACATaGAGGCCTGGATGGCCGTTT +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLQKLQT*RPGWPF
Trigger: AAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCTG...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAGAAACTGCAGACATaGAGGCCTGGATGGCCGTTT +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPQKLQT*RPGWPF
Trigger: AAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCTG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCAGCTGGGATGCACCTaGAAAATATACTCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: VANSSWFCPLIVQALLVFQLGCT*KIYSVK
Trigger: TTTCACTGAGTATATTTTCAAGGTGCATCCCAGCTG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGGGAGAAGATTCATTTaGAGTGGGAGATGTTGGAAC +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQGRRFI*SGRCWN
Trigger: GTTCCAACATCTCCCACTCAAAATGAATCTTCTCCC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTTTTTGCTTCCTTCTTaGATCTACCTTCACCTTCTG +
Preference number: 5 (lower is better)
Translates to: VANSSWFCPLIVQALLVFFLLPS*IYLHLL
Trigger: CAGAAGGTGAAGGTAGATCAAAGAAGGAAGCAAAAA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCACCCCTTTTGTTATTaGTTCAAAGAGTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: VANSSWFCPLIVQALLVFHPFCY*FKEFQS
Trigger: GCTTTGGAACTCTTTGAACAAATAACAAAAGGGGTG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAAGTTCCCTTACTCCTaGTTCGCTTTCCATCATTTT +
Preference number: 5 (lower is better)
Translates to: VANSSWFCPLIVQALLVFKFPYS*FAFHHF
Trigger: AAAATGATGGAAAGCGAACAAGGAGTAAGGGAACTT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGTTCCTTTCCATAGTCTaGCGAAGAAATCTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQFLSIV*RRNLFW
Trigger: CCAGAACAGATTTCTTCGCAAGACTATGGAAAGGAA...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTAGGCAGGAGAATCACTaGAACCCAAGAGGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPRQENH*NPRGRS
Trigger: ACTTCTGCCTCTTGGGTTCAAGTGATTCTCCTGCCT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAAACAATTGCCCTAAGTaGAAATTCACCCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARNNCPK*KFTLRV
Trigger: GACCCTGAGGGTGAATTTCAACTTAGGGCAATTGTT...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAACAATTGCCCTAAGTaGAAATTCACCCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAENNCPK*KFTLRV
Trigger: GACCCTGAGGGTGAATTTCAACTTAGGGCAATTGTT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTTCTCCCTCGCTCTCTaGCTTCCTCTCTTGCCATAT +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLFSLAL*LPLLPY
Trigger: ATATGGCAAGAGAGGAAGCAAGAGAGCGAGGGAGAA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTAATTTGATCCCAGTGTaGGAGGTGGGGCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFNLIPV*EVGPDG
Trigger: CCCATCAGGCCCCACCTCCAACACTGGGATCAAATT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAATTTGATCCCAGTGTaGGAGGTGGGGCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLNLIPV*EVGPDG
Trigger: CCCATCAGGCCCCACCTCCAACACTGGGATCAAATT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGGTTGCTGCTATAGTTaGCATGTTTGTCCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARGCCYS*HVCPPK
Trigger: TTTTGGGGGACAAACATGCAAACTATAGCAGCAACC...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCATGACACTGACTTTTaGAGAAGCCCAAGTCAATCA +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQHDTDF*RSPSQS
Trigger: TGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCATG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGCTAGTTTCAAAGTATaGGTTGGGCCATACCTTGCT +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEASFKV*VGPYLA
Trigger: AGCAAGGTATGGCCCAACCAATACTTTGAAACTAGC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAGTTGCCAACTCCTCTaGGTTCTGTCCTCTTATTGT +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESCQLL*VLSSYC
Trigger: ACAATAAGAGGACAGAACCAAGAGGAGTTGGCAACT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGGCATAGGGTTTCTTTaGGGGGTGAGAAAAATGATA +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQGIGFL*GVRKMI
Trigger: TATCATTTTTCTCACCCCCAAAAGAAACCCTATGCC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCAGCTGGGATGCACCTaGAAAATATACTCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQQLGCT*KIYSVK
Trigger: TTTCACTGAGTATATTTTCAAGGTGCATCCCAGCTG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTTTTGAGTGGGAGATGTaGGAACACTTTGGAAATAAC +
Preference number: 5 (lower is better)
Translates to: VANSSWFCPLIVQALLVFFEWEM*EHFGNN
Trigger: GTTATTTCCAAAGTGTTCCAACATCTCCCACTCAAA...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGGGAGAAGATTCATTTaGAGTGGGAGATGTTGGAAC +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEGRRFI*SGRCWN
Trigger: GTTCCAACATCTCCCACTCAAAATGAATCTTCTCCC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATACAAGAAGAACAGCTaGTCCCCACTCTTACAGTGT +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARYKKNS*SPLLQC
Trigger: ACACTGTAAGAGTGGGGACAAGCTGTTCTTCTTGTA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGAGTTTCGTTTTCCCCTaGGACTCCGCCTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMSFVFP*DSAFPA
Trigger: TGCAGGGAAGGCGGAGTCCAAGGGGAAAACGAAACT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000395127.6
ENST00000681463.1
ENST00000681507.1
CDS GCA 90 bp CCACAAAACAATGTCTATTTATTAGCAAAATCTGTGGAGTCTGACTaGCTAGGTTCAAATCTGTACCGCCGAATAGCTGAATCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: PQNNVYLLAKSVESD*LGSNLYRRIAESSV
Trigger: CACAGAGGATTCAGCTATTCGGCGGTACAGATTTGAACCTAGGCAGTCAGACTCCACAGATTTTGCTAATAAATAGACATTGTTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462861.1
CDS CCA 90 bp TGCTGTTCTCAGGATCATAATCACTGCTCTCAAGAGAATCATCACTaGTCTCAGGATCATAATCAAATCCATCCCAACAGCCATTGTAGT +
Preference number: 5 (lower is better)
Translates to: CCSQDHNHCSQENHH*SQDHNQIHPNSHCS
Trigger: ACTACAATGGCTGTTGGGATGGATTTGATTATGATCCTGAGACCAGTGATGATTCTCTTGAGAGCAGTGATTATGATCCTGAGAACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000405334.5
ENST00000647926.1
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681329.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTGTGCCAAAGATCTTTTaGCCTTCCTTTGATTATTTC +
Preference number: 5 (lower is better)
Translates to: VANSSWFCPLIVQALLVFVPKIF*PSFDYF
Trigger: GAAATAATCAAAGGAAGGCAAAAAGATCTTTGGCAC...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAATCCAAAGCCAAAACTTaGTCTAGTTTCTCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAESKAKT*SSFSPL
Trigger: AAGAGGCGAGAAACTAGACAAAGTTTTGGCTTTGGA...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCACCCCTTTTGTTATTaGTTCAAAGAGTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQHPFCY*FKEFQS
Trigger: GCTTTGGAACTCTTTGAACAAATAACAAAAGGGGTG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATTCCTTTCCATAGTCTaGCGAAGAAATCTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARFLSIV*RRNLFW
Trigger: CCAGAACAGATTTCTTCGCAAGACTATGGAAAGGAA...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAAGGCAGGAGAATCACTaGAACCCAAGAGGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLRQENH*NPRGRS
Trigger: ACTTCTGCCTCTTGGGTTCAAGTGATTCTCCTGCCT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACCTTCCTTCCCATTATaGTCTCATCACATTTGTTGG +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARPSFPL*SHHICW
Trigger: CCAACAAATGTGATGAGACAATAATGGGAAGGAAGG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTAAGTTACCATTACCTTaGAAAGTCCATTTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: VANSSWFCPLIVQALLVFKLPLP*KVHFPN
Trigger: ATTGGGGAAATGGACTTTCAAAGGTAATGGTAACTT...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTTCTCCCTCGCTCTCTaGCTTCCTCTCTTGCCATAT +
Preference number: 5 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVFSLAL*LPLLPY
Trigger: ATATGGCAAGAGAGGAAGCAAGAGAGCGAGGGAGAA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTTCTCCCTCGCTCTCTaGCTTCCTCTCTTGCCATAT +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENFSLAL*LPLLPY
Trigger: ATATGGCAAGAGAGGAAGCAAGAGAGCGAGGGAGAA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTTCTCCCTCGCTCTCTaGCTTCCTCTCTTGCCATAT +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLFSLAL*LPLLPY
Trigger: ATATGGCAAGAGAGGAAGCAAGAGAGCGAGGGAGAA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GTTGCCAACTCCTCTTGGTTCTGTCCTCTTATTGTTCAGGCCCTCTTAGTCTTTCCATCAGGTGAAAGATaGATGAGAAACTTTGTAGTA +
Preference number: 5 (lower is better)
Translates to: VANSSWFCPLIVQALLVFPSGER*MRNFVV
Trigger: TACTACAAAGTTTCTCATCAATCTTTCACCTGATGG...AAAGACTAAGAGGGCCTGAACAATAAGAGGACAGAACCAAGAGGAGTTGGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCAGAAACTGCAGACATaGAGGCCTGGATGGCCGTTT +
Preference number: 5 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLQKLQT*RPGWPF
Trigger: AAACGGCCATCCAGGCCTCAATGTCTGCAGTTTCTG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGGCATAGGGTTTCTTTaGGGGGTGAGAAAAATGATA +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARGIGFL*GVRKMI
Trigger: TATCATTTTTCTCACCCCCAAAAGAAACCCTATGCC...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCTGGTCACTAAAGAGTaGCTTTGGGACTCACACGTA +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENLVTKE*LWDSHV
Trigger: TACGTGTGAGTCCCAAAGCAACTCTTTAGTGACCAG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCTGGTCACTAAAGAGTaGCTTTGGGACTCACACGTA +
Preference number: 5 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVLVTKE*LWDSHV
Trigger: TACGTGTGAGTCCCAAAGCAACTCTTTAGTGACCAG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGATCACAGAATTCCATTaGGATGAAAAGGCACTTAGT +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQITEFH*DEKALS
Trigger: ACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGAT...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACACCCCTTTTGTTATTaGTTCAAAGAGTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEHPFCY*FKEFQS
Trigger: GCTTTGGAACTCTTTGAACAAATAACAAAAGGGGTG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGGATCCTCAGGTTTCTTaGAGAGTAATTTCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQDPQVS*RVISVE
Trigger: TTCTACAGAAATTACTCTCAAAGAAACCTGAGGATC...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAGGCAGGAGAATCACTaGAACCCAAGAGGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLRQENH*NPRGRS
Trigger: ACTTCTGCCTCTTGGGTTCAAGTGATTCTCCTGCCT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTTCTCCCTCGCTCTCTaGCTTCCTCTCTTGCCATAT +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFFSLAL*LPLLPY
Trigger: ATATGGCAAGAGAGGAAGCAAGAGAGCGAGGGAGAA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACCCCAAAATCTCATGTaGAAATTTGATCCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARPQNLM*KFDPSV
Trigger: AACACTGGGATCAAATTTCAACATGAGATTTTGGGG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGTTGGGTGATGCTAAATaGAATCACTTGGTTATTGTG +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQLGDAK*NHLVIV
Trigger: CACAATAACCAAGTGATTCAATTTAGCATCACCCAA...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGCAACCAAATGCAATGTaGGATCTAGATTTCAACAAC +
Preference number: 5 (lower is better)
Translates to: QTSIPHVPQIYLLQSSCQQPNAM*DLDFNN
Trigger: GTTGTTGAAATCTAGATCCAACATTGCATTTGGTTG...CTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGCTAGTTTCAAAGTATaGGTTGGGCCATACCTTGCT +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLASFKV*VGPYLA
Trigger: AGCAAGGTATGGCCCAACCAATACTTTGAAACTAGC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGAGACTTGTATTTACTaGAATGGCATCAGAATCCTG +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEETCIY*NGIRIL
Trigger: CAGGATTCTGATGCCATTCAAGTAAATACAAGTCTC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTACAAGAAGAACAGCTaGTCCCCACTCTTACAGTGT +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLYKKNS*SPLLQC
Trigger: ACACTGTAAGAGTGGGGACAAGCTGTTCTTCTTGTA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTACAAGAAGAACAGCTaGTCCCCACTCTTACAGTGT +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLYKKNS*SPLLQC
Trigger: ACACTGTAAGAGTGGGGACAAGCTGTTCTTCTTGTA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTACAAGAAGAACAGCTaGTCCCCACTCTTACAGTGT +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPYKKNS*SPLLQC
Trigger: ACACTGTAAGAGTGGGGACAAGCTGTTCTTCTTGTA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCTGGTCACTAAAGAGTaGCTTTGGGACTCACACGTA +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFLVTKE*LWDSHV
Trigger: TACGTGTGAGTCCCAAAGCAACTCTTTAGTGACCAG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGTGCCAAAGATCTTTTaGCCTTCCTTTGATTATTTC +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEVPKIF*PSFDYF
Trigger: GAAATAATCAAAGGAAGGCAAAAAGATCTTTGGCAC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTCCATGCCAAACCTCTaGTCCACAGTATACTTTGTT +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLSMPNL*STVYFV
Trigger: AACAAAGTATACTGTGGACAAGAGGTTTGGCATGGA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTCCATGCCAAACCTCTaGTCCACAGTATACTTTGTT +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPSMPNL*STVYFV
Trigger: AACAAAGTATACTGTGGACAAGAGGTTTGGCATGGA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAATCACAGAATTCCATTaGGATGAAAAGGCACTTAGT +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEITEFH*DEKALS
Trigger: ACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGAT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTCCAAAGCCAAAACTTaGTCTAGTTTCTCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPSKAKT*SSFSPL
Trigger: AAGAGGCGAGAAACTAGACAAAGTTTTGGCTTTGGA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGATCCTCAGGTTTCTTaGAGAGTAATTTCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEDPQVS*RVISVE
Trigger: TTCTACAGAAATTACTCTCAAAGAAACCTGAGGATC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCCTTCCTTCCCATTATaGTCTCATCACATTTGTTGG +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLPSFPL*SHHICW
Trigger: CCAACAAATGTGATGAGACAATAATGGGAAGGAAGG...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAAAGTTACCATTACCTTaGAAAGTCCATTTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEKLPLP*KVHFPN
Trigger: ATTGGGGAAATGGACTTTCAAAGGTAATGGTAACTT...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTGCCTTACAGCACGGTaGTCTTTAAAGTGGTTGTTA +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLCLTAR*SLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTGCCTTACAGCACGGTaGTCTTTAAAGTGGTTGTTA +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPCLTAR*SLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAACAATTGCCCTAAGTaGAAATTCACCCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLNNCPK*KFTLRV
Trigger: GACCCTGAGGGTGAATTTCAACTTAGGGCAATTGTT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTAACAATTGCCCTAAGTaGAAATTCACCCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISNNCPK*KFTLRV
Trigger: GACCCTGAGGGTGAATTTCAACTTAGGGCAATTGTT...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAACAATTGCCCTAAGTaGAAATTCACCCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENNNCPK*KFTLRV
Trigger: GACCCTGAGGGTGAATTTCAACTTAGGGCAATTGTT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGGGTTGCTGCTATAGTTaGCATGTTTGTCCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLGCCYS*HVCPPK
Trigger: TTTTGGGGGACAAACATGCAAACTATAGCAGCAACC...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAAGCTAAATTGAATCACTaGGTTATTGTGGTGACCATT +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEAKLNH*VIVVTI
Trigger: AATGGTCACCACAATAACCAAGTGATTCAATTTAGC...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGAGCTAAATTGAATCACTaGGTTATTGTGGTGACCATT +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARAKLNH*VIVVTI
Trigger: AATGGTCACCACAATAACCAAGTGATTCAATTTAGC...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTTAGGGTGTTCCACCTaGGGTGATGCTAAATTGAAT +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLLGCST*GDAKLN
Trigger: ATTCAATTTAGCATCACCCAAGGTGGAACACCCTAA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCATGACACTGACTTTTaGAGAAGCCCAAGTCAATCA +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPHDTDF*RSPSQS
Trigger: TGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCATG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCCATGACACTGACTTTTaGAGAAGCCCAAGTCAATCA +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLHDTDF*RSPSQS
Trigger: TGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCATG...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ACTCTCAGTCAAATCCTGAGTGGAGGAAATTCCACAGGACAAATAAAAGCCGAACAACCAAATGCAATGTaGGATCTAGATTTCAACAAC +
Preference number: 5 (lower is better)
Translates to: TLSQILSGGNSTGQIKAEQPNAM*DLDFNN
Trigger: GTTGTTGAAATCTAGATCCAACATTGCATTTGGTTG...TTCGGCTTTTATTTGTCCTGTGGAATTTCCTCCACTCAGGATTTGACTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCAGAGCTCATGCCAGACAACCAAATGCAATGTaGGATCTAGATTTCAACAAC +
Preference number: 5 (lower is better)
Translates to: KLAYPMFLKYIFSRAHARQPNAM*DLDFNN
Trigger: GTTGTTGAAATCTAGATCCAACATTGCATTTGGTTG...TCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGGCTAGTTTCAAAGTATaGGTTGGGCCATACCTTGCT +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLASFKV*VGPYLA
Trigger: AGCAAGGTATGGCCCAACCAATACTTTGAAACTAGC...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACGCTAGTTTCAAAGTATaGGTTGGGCCATACCTTGCT +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENASFKV*VGPYLA
Trigger: AGCAAGGTATGGCCCAACCAATACTTTGAAACTAGC...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAGTTGCCAACTCCTCTaGGTTCTGTCCTCTTATTGT +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLSCQLL*VLSSYC
Trigger: ACAATAAGAGGACAGAACCAAGAGGAGTTGGCAACT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAGTTGCCAACTCCTCTaGGTTCTGTCCTCTTATTGT +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSCQLL*VLSSYC
Trigger: ACAATAAGAGGACAGAACCAAGAGGAGTTGGCAACT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCGGCATAGGGTTTCTTTaGGGGGTGAGAAAAATGATA +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLGIGFL*GVRKMI
Trigger: TATCATTTTTCTCACCCCCAAAAGAAACCCTATGCC...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGGCATAGGGTTTCTTTaGGGGGTGAGAAAAATGATA +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLGIGFL*GVRKMI
Trigger: TATCATTTTTCTCACCCCCAAAAGAAACCCTATGCC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAGGGAGAAGATTCATTTaGAGTGGGAGATGTTGGAAC +
Preference number: 5 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLGRRFI*SGRCWN
Trigger: GTTCCAACATCTCCCACTCAAAATGAATCTTCTCCC...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTACAAGAAGAACAGCTaGTCCCCACTCTTACAGTGT +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLYKKNS*SPLLQC
Trigger: ACACTGTAAGAGTGGGGACAAGCTGTTCTTCTTGTA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCTTTTTGCTTCCTTCTTaGATCTACCTTCACCTTCTG +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLFLLPS*IYLHLL
Trigger: CAGAAGGTGAAGGTAGATCAAAGAAGGAAGCAAAAA...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTTTTTGCTTCCTTCTTaGATCTACCTTCACCTTCTG +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPFLLPS*IYLHLL
Trigger: CAGAAGGTGAAGGTAGATCAAAGAAGGAAGCAAAAA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTAAGTTTAGCGGCCAATaGTTTTGCTTCCTGTTTAGT +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPKFSGQ*FCFLFS
Trigger: ACTAAACAGGAAGCAAAACAATTGGCCGCTAAACTT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTCCATGCCAAACCTCTaGTCCACAGTATACTTTGTT +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLSMPNL*STVYFV
Trigger: AACAAAGTATACTGTGGACAAGAGGTTTGGCATGGA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTCCATGCCAAACCTCTaGTCCACAGTATACTTTGTT +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSMPNL*STVYFV
Trigger: AACAAAGTATACTGTGGACAAGAGGTTTGGCATGGA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATCCATGCCAAACCTCTaGTCCACAGTATACTTTGTT +
Preference number: 5 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLSMPNL*STVYFV
Trigger: AACAAAGTATACTGTGGACAAGAGGTTTGGCATGGA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTCCAAAGCCAAAACTTaGTCTAGTTTCTCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISSKAKT*SSFSPL
Trigger: AAGAGGCGAGAAACTAGACAAAGTTTTGGCTTTGGA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTCCAAAGCCAAAACTTaGTCTAGTTTCTCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENSKAKT*SSFSPL
Trigger: AAGAGGCGAGAAACTAGACAAAGTTTTGGCTTTGGA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCAAGTTCCCTTACTCCTaGTTCGCTTTCCATCATTTT +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLKFPYS*FAFHHF
Trigger: AAAATGATGGAAAGCGAACAAGGAGTAAGGGAACTT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCAAGTTCCCTTACTCCTaGTTCGCTTTCCATCATTTT +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLKFPYS*FAFHHF
Trigger: AAAATGATGGAAAGCGAACAAGGAGTAAGGGAACTT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGTTCCTTTCCATAGTCTaGCGAAGAAATCTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLFLSIV*RRNLFW
Trigger: CCAGAACAGATTTCTTCGCAAGACTATGGAAAGGAA...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTTCCTTTCCATAGTCTaGCGAAGAAATCTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISFLSIV*RRNLFW
Trigger: CCAGAACAGATTTCTTCGCAAGACTATGGAAAGGAA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTTCCTTTCCATAGTCTaGCGAAGAAATCTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVFLSIV*RRNLFW
Trigger: CCAGAACAGATTTCTTCGCAAGACTATGGAAAGGAA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCCTTCCTTCCCATTATaGTCTCATCACATTTGTTGG +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENPSFPL*SHHICW
Trigger: CCAACAAATGTGATGAGACAATAATGGGAAGGAAGG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTGCCTTACAGCACGGTaGTCTTTAAAGTGGTTGTTA +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENCLTAR*SLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCCCCAAAATCTCATGTaGAAATTTGATCCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLPQNLM*KFDPSV
Trigger: AACACTGGGATCAAATTTCAACATGAGATTTTGGGG...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCCCCAAAATCTCATGTaGAAATTTGATCCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPPQNLM*KFDPSV
Trigger: AACACTGGGATCAAATTTCAACATGAGATTTTGGGG...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTGGTTGCTGCTATAGTTaGCATGTTTGTCCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFGCCYS*HVCPPK
Trigger: TTTTGGGGGACAAACATGCAAACTATAGCAGCAACC...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGGGTTGCTGCTATAGTTaGCATGTTTGTCCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLGCCYS*HVCPPK
Trigger: TTTTGGGGGACAAACATGCAAACTATAGCAGCAACC...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTTAGGGTGTTCCACCTaGGGTGATGCTAAATTGAAT +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENLGCST*GDAKLN
Trigger: ATTCAATTTAGCATCACCCAAGGTGGAACACCCTAA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATTAGGGTGTTCCACCTaGGGTGATGCTAAATTGAAT +
Preference number: 5 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLLGCST*GDAKLN
Trigger: ATTCAATTTAGCATCACCCAAGGTGGAACACCCTAA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTTAGGGTGTTCCACCTaGGGTGATGCTAAATTGAAT +
Preference number: 5 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVLGCST*GDAKLN
Trigger: ATTCAATTTAGCATCACCCAAGGTGGAACACCCTAA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCATGACACTGACTTTTaGAGAAGCCCAAGTCAATCA +
Preference number: 5 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISHDTDF*RSPSQS
Trigger: TGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCATG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTTGGCCTCTAAATGTTaGTGCATGCATTGCCTAAAA +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLLASKC*CMHCLK
Trigger: TTTTAGGCAATGCATGCACAAACATTTAGAGGCCAA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGAGTTGCCAACTCCTCTaGGTTCTGTCCTCTTATTGT +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMSCQLL*VLSSYC
Trigger: ACAATAAGAGGACAGAACCAAGAGGAGTTGGCAACT...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCGAGACTTGTATTTACTaGAATGGCATCAGAATCCTG +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLETCIY*NGIRIL
Trigger: CAGGATTCTGATGCCATTCAAGTAAATACAAGTCTC...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGAGACTTGTATTTACTaGAATGGCATCAGAATCCTG +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLETCIY*NGIRIL
Trigger: CAGGATTCTGATGCCATTCAAGTAAATACAAGTCTC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACGGCATAGGGTTTCTTTaGGGGGTGAGAAAAATGATA +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENGIGFL*GVRKMI
Trigger: TATCATTTTTCTCACCCCCAAAAGAAACCCTATGCC...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCAGCTGGGATGCACCTaGAAAATATACTCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVQLGCT*KIYSVK
Trigger: TTTCACTGAGTATATTTTCAAGGTGCATCCCAGCTG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACAGCTGGGATGCACCTaGAAAATATACTCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLQLGCT*KIYSVK
Trigger: TTTCACTGAGTATATTTTCAAGGTGCATCCCAGCTG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCTTTGAGTGGGAGATGTaGGAACACTTTGGAAATAAC +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLFEWEM*EHFGNN
Trigger: GTTATTTCCAAAGTGTTCCAACATCTCCCACTCAAA...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTTTTGAGTGGGAGATGTaGGAACACTTTGGAAATAAC +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPFEWEM*EHFGNN
Trigger: GTTATTTCCAAAGTGTTCCAACATCTCCCACTCAAA...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTACAAGAAGAACAGCTaGTCCCCACTCTTACAGTGT +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFYKKNS*SPLLQC
Trigger: ACACTGTAAGAGTGGGGACAAGCTGTTCTTCTTGTA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS GCA 90 bp TCTTTGACCTTGAACTATTTTTGCTGTTCTCAGGATCATAATCACTaGTCTCAAGAGAATCATCACTGGTCTCAGGATCATAATCAAATC +
Preference number: 5 (lower is better)
Translates to: SLTLNYFCCSQDHNH*SQENHHWSQDHNQI
Trigger: GATTTGATTATGATCCTGAGACCAGTGATGATTCTCTTGAGAGCAGTGATTATGATCCTGAGAACAGCAAAAATAGTTCAAGGTCAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000405334.5
ENST00000647926.1
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681329.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTTTTTGCTTCCTTCTTaGATCTACCTTCACCTTCTG +
Preference number: 5 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVFLLPS*IYLHLL
Trigger: CAGAAGGTGAAGGTAGATCAAAGAAGGAAGCAAAAA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTTTTTGCTTCCTTCTTaGATCTACCTTCACCTTCTG +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENFLLPS*IYLHLL
Trigger: CAGAAGGTGAAGGTAGATCAAAGAAGGAAGCAAAAA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAAAGTTTAGCGGCCAATaGTTTTGCTTCCTGTTTAGT +
Preference number: 5 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLKFSGQ*FCFLFS
Trigger: ACTAAACAGGAAGCAAAACAATTGGCCGCTAAACTT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTAAGTTTAGCGGCCAATaGTTTTGCTTCCTGTTTAGT +
Preference number: 5 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVKFSGQ*FCFLFS
Trigger: ACTAAACAGGAAGCAAAACAATTGGCCGCTAAACTT...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTCCATGCCAAACCTCTaGTCCACAGTATACTTTGTT +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFSMPNL*STVYFV
Trigger: AACAAAGTATACTGTGGACAAGAGGTTTGGCATGGA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCATCACAGAATTCCATTaGGATGAAAAGGCACTTAGT +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLITEFH*DEKALS
Trigger: ACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGAT...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AATTATCTTCTCTACAGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTATCACAGAATTCCATTaGGATGAAAAGGCACTTAGT +
Preference number: 5 (lower is better)
Translates to: NYLLYSNSGQQTSIPHVPITEFH*DEKALS
Trigger: ACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGAT...AGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTCCAAAGCCAAAACTTaGTCTAGTTTCTCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMSKAKT*SSFSPL
Trigger: AAGAGGCGAGAAACTAGACAAAGTTTTGGCTTTGGA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCACCCCTTTTGTTATTaGTTCAAAGAGTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVHPFCY*FKEFQS
Trigger: GCTTTGGAACTCTTTGAACAAATAACAAAAGGGGTG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCACCCCTTTTGTTATTaGTTCAAAGAGTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENHPFCY*FKEFQS
Trigger: GCTTTGGAACTCTTTGAACAAATAACAAAAGGGGTG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCGATCCTCAGGTTTCTTaGAGAGTAATTTCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLDPQVS*RVISVE
Trigger: TTCTACAGAAATTACTCTCAAAGAAACCTGAGGATC...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCGATCCTCAGGTTTCTTaGAGAGTAATTTCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLDPQVS*RVISVE
Trigger: TTCTACAGAAATTACTCTCAAAGAAACCTGAGGATC...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCCTTCCTTCCCATTATaGTCTCATCACATTTGTTGG +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFPSFPL*SHHICW
Trigger: CCAACAAATGTGATGAGACAATAATGGGAAGGAAGG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCAAGTTACCATTACCTTaGAAAGTCCATTTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: SHHSPPSKITTIQNLIFLKLPLP*KVHFPN
Trigger: ATTGGGGAAATGGACTTTCAAAGGTAATGGTAACTT...GAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTGCCTTACAGCACGGTaGTCTTTAAAGTGGTTGTTA +
Preference number: 5 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLCLTAR*SLKWLL
Trigger: TAACAACCACTTTAAAGACAACCGTGCTGTAAGGCA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTACCCCAAAATCTCATGTaGAAATTTGATCCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLPQNLM*KFDPSV
Trigger: AACACTGGGATCAAATTTCAACATGAGATTTTGGGG...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACCCCCAAAATCTCATGTaGAAATTTGATCCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENPQNLM*KFDPSV
Trigger: AACACTGGGATCAAATTTCAACATGAGATTTTGGGG...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCGCTAAATTGAATCACTaGGTTATTGTGGTGACCATT +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLAKLNH*VIVVTI
Trigger: AATGGTCACCACAATAACCAAGTGATTCAATTTAGC...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTTAGGGTGTTCCACCTaGGGTGATGCTAAATTGAAT +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMLGCST*GDAKLN
Trigger: ATTCAATTTAGCATCACCCAAGGTGGAACACCCTAA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGCATGACACTGACTTTTaGAGAAGCCCAAGTCAATCA +
Preference number: 5 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLHDTDF*RSPSQS
Trigger: TGATTGACTTGGGCTTCTCAAAAAGTCAGTGTCATG...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTTTGGCCTCTAAATGTTaGTGCATGCATTGCCTAAAA +
Preference number: 5 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVLASKC*CMHCLK
Trigger: TTTTAGGCAATGCATGCACAAACATTTAGAGGCCAA...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTATTGGCCTCTAAATGTTaGTGCATGCATTGCCTAAAA +
Preference number: 5 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLLASKC*CMHCLK
Trigger: TTTTAGGCAATGCATGCACAAACATTTAGAGGCCAA...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AGCAATTCAGGACAACAAACTAGCATACCCCATGTTCCTCAAATATATCTTCTCCCATCAGGTGAAAGATaGATGAGAAACTTTGTAGTA +
Preference number: 5 (lower is better)
Translates to: SNSGQQTSIPHVPQIYLLPSGER*MRNFVV
Trigger: TACTACAAAGTTTCTCATCAATCTTTCACCTGATGG...GAGAAGATATATTTGAGGAACATGGGGTATGCTAGTTTGTTGTCCTGAATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCAGCTGGGATGCACCTaGAAAATATACTCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMQLGCT*KIYSVK
Trigger: TTTCACTGAGTATATTTTCAAGGTGCATCCCAGCTG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCAGCTGGGATGCACCTaGAAAATATACTCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFQLGCT*KIYSVK
Trigger: TTTCACTGAGTATATTTTCAAGGTGCATCCCAGCTG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACTTTGAGTGGGAGATGTaGGAACACTTTGGAAATAAC +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENFEWEM*EHFGNN
Trigger: GTTATTTCCAAAGTGTTCCAACATCTCCCACTCAAA...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTAAGTTTAGCGGCCAATaGTTTTGCTTCCTGTTTAGT +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFKFSGQ*FCFLFS
Trigger: ACTAAACAGGAAGCAAAACAATTGGCCGCTAAACTT...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTGTGCCAAAGATCTTTTaGCCTTCCTTTGATTATTTC +
Preference number: 5 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISVPKIF*PSFDYF
Trigger: GAAATAATCAAAGGAAGGCAAAAAGATCTTTGGCAC...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAATCACAGAATTCCATTaGGATGAAAAGGCACTTAGT +
Preference number: 5 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLITEFH*DEKALS
Trigger: ACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGAT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCACCCCTTTTGTTATTaGTTCAAAGAGTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMHPFCY*FKEFQS
Trigger: GCTTTGGAACTCTTTGAACAAATAACAAAAGGGGTG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGAAGTTCCCTTACTCCTaGTTCGCTTTCCATCATTTT +
Preference number: 5 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLKFPYS*FAFHHF
Trigger: AAAATGATGGAAAGCGAACAAGGAGTAAGGGAACTT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGGATCCTCAGGTTTCTTaGAGAGTAATTTCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLDPQVS*RVISVE
Trigger: TTCTACAGAAATTACTCTCAAAGAAACCTGAGGATC...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGAAGTTACCATTACCTTaGAAAGTCCATTTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLKLPLP*KVHFPN
Trigger: ATTGGGGAAATGGACTTTCAAAGGTAATGGTAACTT...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACAAGTTACCATTACCTTaGAAAGTCCATTTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENKLPLP*KVHFPN
Trigger: ATTGGGGAAATGGACTTTCAAAGGTAATGGTAACTT...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GCTACTAACCTTCTAACAAACTTGGAGGTAATCTTTGATGCTTACCTTTCCTTAAAGTTACCATTACCTTaGAAAGTCCATTTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: ATNLLTNLEVIFDAYLSLKLPLP*KVHFPN
Trigger: ATTGGGGAAATGGACTTTCAAAGGTAATGGTAACTT...TAAGGAAAGGTAAGCATCAAAGATTACCTCCAAGTTTGTTAGAAGGTTAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCCTAAAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGGCTAAATTGAATCACTaGGTTATTGTGGTGACCATT +
Preference number: 5 (lower is better)
Translates to: ILKSYGSFRMVAGCCYSLAKLNH*VIVVTI
Trigger: AATGGTCACCACAATAACCAAGTGATTCAATTTAGC...CAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTTTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp GAGACACATCAACCAAATGCAATGTTGGATCTAGATTTCAACAACCAAGAAAACGCTAAATTGAATCACTaGGTTATTGTGGTGACCATT +
Preference number: 5 (lower is better)
Translates to: ETHQPNAMLDLDFNNQENAKLNH*VIVVTI
Trigger: AATGGTCACCACAATAACCAAGTGATTCAATTTAGC...GTTTTCTTGGTTGTTGAAATCTAGATCCAACATTGCATTTGGTTGATGTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTGCTAAATTGAATCACTaGGTTATTGTGGTGACCATT +
Preference number: 5 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISAKLNH*VIVVTI
Trigger: AATGGTCACCACAATAACCAAGTGATTCAATTTAGC...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTTTGGGTGATGCTAAATaGAATCACTTGGTTATTGTG +
Preference number: 5 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISLGDAK*NHLVIV
Trigger: CACAATAACCAAGTGATTCAATTTAGCATCACCCAA...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTTGGCCTCTAAATGTTaGTGCATGCATTGCCTAAAA +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMLASKC*CMHCLK
Trigger: TTTTAGGCAATGCATGCACAAACATTTAGAGGCCAA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp AAATCATATGGCAGTTTTAGAATGGTAGCTGGTTGCTGCTATAGTTTGCATGTTCAACCAAATGCAATGTaGGATCTAGATTTCAACAAC +
Preference number: 5 (lower is better)
Translates to: KSYGSFRMVAGCCYSLHVQPNAM*DLDFNN
Trigger: GTTGTTGAAATCTAGATCCAACATTGCATTTGGTTG...AACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAAACTGCCATATGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATCACATCATTCCCCTCCCTCAAAGATAACCACCATCCAGAATTTAATATTTCTCAACCAAATGCAATGTaGGATCTAGATTTCAACAAC +
Preference number: 5 (lower is better)
Translates to: ITSFPSLKDNHHPEFNISQPNAM*DLDFNN
Trigger: GTTGTTGAAATCTAGATCCAACATTGCATTTGGTTG...AGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTGAGACTTGTATTTACTaGAATGGCATCAGAATCCTG +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFETCIY*NGIRIL
Trigger: CAGGATTCTGATGCCATTCAAGTAAATACAAGTCTC...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGGAGACTTGTATTTACTaGAATGGCATCAGAATCCTG +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMETCIY*NGIRIL
Trigger: CAGGATTCTGATGCCATTCAAGTAAATACAAGTCTC...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGTTTGAGTGGGAGATGTaGGAACACTTTGGAAATAAC +
Preference number: 5 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLFEWEM*EHFGNN
Trigger: GTTATTTCCAAAGTGTTCCAACATCTCCCACTCAAA...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTTTGAGTGGGAGATGTaGGAACACTTTGGAAATAAC +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMFEWEM*EHFGNN
Trigger: GTTATTTCCAAAGTGTTCCAACATCTCCCACTCAAA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTGTGCCAAAGATCTTTTaGCCTTCCTTTGATTATTTC +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFVPKIF*PSFDYF
Trigger: GAAATAATCAAAGGAAGGCAAAAAGATCTTTGGCAC...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGGTGCCAAAGATCTTTTaGCCTTCCTTTGATTATTTC +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMVPKIF*PSFDYF
Trigger: GAAATAATCAAAGGAAGGCAAAAAGATCTTTGGCAC...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGATCACAGAATTCCATTaGGATGAAAAGGCACTTAGT +
Preference number: 5 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLITEFH*DEKALS
Trigger: ACTAAGTGCCTTTTCATCCAAATGGAATTCTGTGAT...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp TTGTATTTACTTGAATGGCATCAGAATCCTGCTACTAACCTTCTAACAAACTTGGATCCTCAGGTTTCTTaGAGAGTAATTTCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: LYLLEWHQNPATNLLTNLDPQVS*RVISVE
Trigger: TTCTACAGAAATTACTCTCAAAGAAACCTGAGGATC...CAAGTTTGTTAGAAGGTTAGTAGCAGGATTCTGATGCCATTCAAGTAAATACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGGATCCTCAGGTTTCTTaGAGAGTAATTTCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMDPQVS*RVISVE
Trigger: TTCTACAGAAATTACTCTCAAAGAAACCTGAGGATC...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTTTGGGTGATGCTAAATaGAATCACTTGGTTATTGTG +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFLGDAK*NHLVIV
Trigger: CACAATAACCAAGTGATTCAATTTAGCATCACCCAA...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCAACCAAATGCAATGTaGGATCTAGATTTCAACAAC +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMQPNAM*DLDFNN
Trigger: GTTGTTGAAATCTAGATCCAACATTGCATTTGGTTG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp CACGTATGTAGGAATAGAATTGATAGCTATGTGGGTATACATGGATTCAACTTTCCATCAGGTGAAAGATaGATGAGAAACTTTGTAGTA +
Preference number: 5 (lower is better)
Translates to: HVCRNRIDSYVGIHGFNFPSGER*MRNFVV
Trigger: TACTACAAAGTTTCTCATCAATCTTTCACCTGATGG...AAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGCCATCAGGTGAAAGATaGATGAGAAACTTTGTAGTA +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMPSGER*MRNFVV
Trigger: TACTACAAAGTTTCTCATCAATCTTTCACCTGATGG...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233057.9
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS-3UTR CAA 90 bp ATGTGCATTATGGTTGTTCCCTGTTCTTTTGGCTATTATAAACAGGGTTTTATGTTCCTTTCCATAGTCTaGCGAAGAAATCTTAAGATC +
Preference number: 5 (lower is better)
Translates to: MCIMVVPCSFGYYKQGFMFLSIV*RRNLKI
Trigger: GATCTTAAGATTTCTTCGCAAGACTATGGAAAGGAA...CATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679979.1
CDS CAA 90 bp GGCGGGCTTGGCACCGGCGGGCGGGCTTGGCACCGGCAGGCGGGCTaGGCACCCACGTGCTGCCCCTGCACGGCCAGGACCCTGCACCCC +
Preference number: 6 (lower is better)
Translates to: GGLGTGGRAWHRQAG*APTCCPCTARTLHP
Trigger: GGGGTGCAGGGTCCTGGCCGTGCAGGGGCAGCACGTGGGTGCCAAGCCCGCCTGCCGGTGCCAAGCCCGCCCGCCGGTGCCAAGCCCGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CAA 90 bp CGCGCGAGAGGCACTGGCGGGCGGGCTTGGCACCGGCGGGCGGGCTaGGCACCGGCAGGCGGGCTTGGCACCCACGTGCTGCCCCTGCAC +
Preference number: 6 (lower is better)
Translates to: RARGTGGRAWHRRAG*APAGGLGTHVLPLH
Trigger: GTGCAGGGGCAGCACGTGGGTGCCAAGCCCGCCTGCCGGTGCCAAGCCCGCCCGCCGGTGCCAAGCCCGCCCGCCAGTGCCTCTCGCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CCA 72 bp GCACCGGCGGGCGGGCTTGGCACCGGCAGGCGGGCTTaGCACCCACGTGCTGCCCCTGCACGGCCAGGACCC +
Preference number: 6 (lower is better)
Translates to: APAGGLGTGRRA*HPRAAPARPGP
Trigger: GGGTCCTGGCCGTGCAGGGGCAGCACGTGGGTGCCAAGCCCGCCTGCCGGTGCCAAGCCCGCCCGCCGGTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CCA 72 bp TCCAGAGTGCGCGCGAGAGGCACTGGCGGGCGGGCTTaGCACCGGCGGGCGGGCTTGGCACCGGCAGGCGGG +
Preference number: 6 (lower is better)
Translates to: SRVRARGTGGRA*HRRAGLAPAGG
Trigger: CCCGCCTGCCGGTGCCAAGCCCGCCCGCCGGTGCCAAGCCCGCCCGCCAGTGCCTCTCGCGCGCACTCTGGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CAA 72 bp GGCACCGGCGGGCGGGCTTGGCACCGGCAGGCGGGCTaGGCACCCACGTGCTGCCCCTGCACGGCCAGGACC +
Preference number: 6 (lower is better)
Translates to: GTGGRAWHRQAG*APTCCPCTART
Trigger: GGTCCTGGCCGTGCAGGGGCAGCACGTGGGTGCCAAGCCCGCCTGCCGGTGCCAAGCCCGCCCGCCGGTGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CAA 90 bp TGGCGCTGGATCCAGAGTGCGCGCGAGAGGCACTGGCGGGCGGGCTaGGCACCGGCGGGCGGGCTTGGCACCGGCAGGCGGGCTTGGCAC +
Preference number: 6 (lower is better)
Translates to: WRWIQSARERHWRAG*APAGGLGTGRRAWH
Trigger: GTGCCAAGCCCGCCTGCCGGTGCCAAGCCCGCCCGCCGGTGCCAAGCCCGCCCGCCAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCCA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CCA 72 bp AATTGGCGCTGGATCCAGAGTGCGCGCGAGAGGCACTaGCGGGCGGGCTTGGCACCGGCGGGCGGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: NWRWIQSARERH*RAGLAPAGGLG
Trigger: GCCAAGCCCGCCCGCCGGTGCCAAGCCCGCCCGCCAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCCAATT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CAA 90 bp GCCCCCTCTCGCACAAGCCCTCGTCTGCTACGGGATTGGGGTAAATaGGCGCTGGATCCAGAGTGCGCGCGAGAGGCACTGGCGGGCGGG +
Preference number: 6 (lower is better)
Translates to: APSRTSPRLLRDWGK*ALDPECAREALAGG
Trigger: CCCGCCCGCCAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCCAATTTACCCCAATCCCGTAGCAGACGAGGGCTTGTGCGAGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CCA 72 bp CCGCCGCCGGCCGGAGACCCGCGGCTTCGGGAGAGCTaGTTCTCAGTTTCGTTTTCCCCTTGGACTCCGCCT +
Preference number: 6 (lower is better)
Translates to: PPPAGDPRLRES*FSVSFSPWTPP
Trigger: AGGCGGAGTCCAAGGGGAAAACGAAACTGAGAACCAGCTCTCCCGAAGCCGCGGGTCTCCGGCCGGCGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395127.6
ENST00000679507.1
ENST00000681463.1
ENST00000681507.1
CDS GCA 72 bp CTACGGGATTGGGGTAAATTGGCGCTGGATCCAGAGTaGGCGCGAGAGGCACTGGCGGGCGGGCTTGGCACC +
Preference number: 6 (lower is better)
Translates to: LRDWGKLALDPE*AREALAGGLGT
Trigger: GGTGCCAAGCCCGCCCGCCAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCCAATTTACCCCAATCCCGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS GCA 72 bp GCAGCCGCCCGGCCCCCTCTCGCACAAGCCCTCGTCTaGTACGGGATTGGGGTAAATTGGCGCTGGATCCAG +
Preference number: 6 (lower is better)
Translates to: AAARPPLAQALV*YGIGVNWRWIQ
Trigger: CTGGATCCAGCGCCAATTTACCCCAATCCCGTAGCAGACGAGGGCTTGTGCGAGAGGGGGCCGGGCGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CCA 72 bp GCCCTCGTCTGCTACGGGATTGGGGTAAATTGGCGCTaGATCCAGAGTGCGCGCGAGAGGCACTGGCGGGCG +
Preference number: 6 (lower is better)
Translates to: ALVCYGIGVNWR*IQSARERHWRA
Trigger: CGCCCGCCAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCCAATTTACCCCAATCCCGTAGCAGACGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CCA 72 bp GCCCCCTCTCGCACAAGCCCTCGTCTGCTACGGGATTaGGGTAAATTGGCGCTGGATCCAGAGTGCGCGCGA +
Preference number: 6 (lower is better)
Translates to: APSRTSPRLLRD*GKLALDPECAR
Trigger: TCGCGCGCACTCTGGATCCAGCGCCAATTTACCCCAATCCCGTAGCAGACGAGGGCTTGTGCGAGAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CCA 72 bp TCTTGCCACACCGCGGCCCCCTCACCTTTACAAGCCTaGGGATCAGAGGCCTGGGGGCGTAATCTCCTTCAC +
Preference number: 6 (lower is better)
Translates to: SCHTAAPSPLQA*GSEAWGRNLLH
Trigger: GTGAAGGAGATTACGCCCCCAGGCCTCTGATCCCCAGGCTTGTAAAGGTGAGGGGGCCGCGGTGTGGCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000681329.1
CDS CCA 72 bp GCACAAGCCCTCGTCTGCTACGGGATTGGGGTAAATTaGCGCTGGATCCAGAGTGCGCGCGAGAGGCACTGG +
Preference number: 6 (lower is better)
Translates to: AQALVCYGIGVN*RWIQSARERHW
Trigger: CCAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCCAATTTACCCCAATCCCGTAGCAGACGAGGGCTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS CAA 72 bp CGCACAAGCCCTCGTCTGCTACGGGATTGGGGTAAATaGGCGCTGGATCCAGAGTGCGCGCGAGAGGCACTG +
Preference number: 6 (lower is better)
Translates to: RTSPRLLRDWGK*ALDPECAREAL
Trigger: CAGTGCCTCTCGCGCGCACTCTGGATCCAGCGCCAATTTACCCCAATCCCGTAGCAGACGAGGGCTTGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681507.1
CDS GCA 72 bp TCGGGGCCTGTAAACACCAAAGCACTCTTTCCCTCTTaGCACACCGCGGCCCCCTCACCTTTACAAGCCTGG +
Preference number: 6 (lower is better)
Translates to: SGPVNTKALFPS*HTAAPSPLQAW
Trigger: CCAGGCTTGTAAAGGTGAGGGGGCCGCGGTGTGGCAAGAGGGAAAGAGTGCTTTGGTGTTTACAGGCCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681329.1
CDS CAA 72 bp GTCGGGGCCTGTAAACACCAAAGCACTCTTTCCCTCTaGCCACACCGCGGCCCCCTCACCTTTACAAGCCTG +
Preference number: 6 (lower is better)
Translates to: VGACKHQSTLSL*PHRGPLTFTSL
Trigger: CAGGCTTGTAAAGGTGAGGGGGCCGCGGTGTGGCAAGAGGGAAAGAGTGCTTTGGTGTTTACAGGCCCCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681329.1
CDS CCA 72 bp TCAGAAGCGAGTGTGCTGGTCACTAAAGAGTTGCTTTaGGACTCACACGTAGTAGCAAAAGAACCAGAGGAC +
Preference number: 6 (lower is better)
Translates to: SEASVLVTKELL*DSHVVAKEPED
Trigger: GTCCTCTGGTTCTTTTGCTACTACGTGTGAGTCCCAAAGCAACTCTTTAGTGACCAGCACACTCGCTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000405334.5
ENST00000411537.7
ENST00000496059.1
ENST00000647926.1
ENST00000679507.1
ENST00000679979.1
ENST00000681329.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS CAA 72 bp CCCCAAAGCGTAGAGGTCCACTTCCTTTCCATAGTCTaGCGAAGAAATCTGTTCTGGGCTCATGTATCGCAA +
Preference number: 6 (lower is better)
Translates to: PQSVEVHFLSIV*RRNLFWAHVSQ
Trigger: TTGCGATACATGAGCCCAGAACAGATTTCTTCGCAAGACTATGGAAAGGAAGTGGACCTCTACGCTTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000405334.5
ENST00000647926.1
ENST00000679507.1
ENST00000680273.1
ENST00000681329.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS CAA 90 bp CCTTCAGATGATGATTCAGAAGCGAGTGTGCTGGTCACTAAAGAGTaGCTTTGGGACTCACACGTAGTAGCAAAAGAACCAGAGGACAGG +
Preference number: 6 (lower is better)
Translates to: PSDDDSEASVLVTKE*LWDSHVVAKEPEDR
Trigger: CCTGTCCTCTGGTTCTTTTGCTACTACGTGTGAGTCCCAAAGCAACTCTTTAGTGACCAGCACACTCGCTTCTGAATCATCATCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000405334.5
ENST00000411537.7
ENST00000496059.1
ENST00000647926.1
ENST00000679507.1
ENST00000679979.1
ENST00000681329.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS CAA 72 bp GATGATTCAGAAGCGAGTGTGCTGGTCACTAAAGAGTaGCTTTGGGACTCACACGTAGTAGCAAAAGAACCA +
Preference number: 6 (lower is better)
Translates to: DDSEASVLVTKE*LWDSHVVAKEP
Trigger: TGGTTCTTTTGCTACTACGTGTGAGTCCCAAAGCAACTCTTTAGTGACCAGCACACTCGCTTCTGAATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000405334.5
ENST00000411537.7
ENST00000496059.1
ENST00000647926.1
ENST00000679507.1
ENST00000679979.1
ENST00000681329.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS CAA 90 bp CATCCCAACAGCCATTGTAGTGAACAATATTTACATGATCAAGTTTaGCCAATGCTTTTACTTCACGCTCCGCCTTCCTCTTGTCCACAG +
Preference number: 6 (lower is better)
Translates to: HPNSHCSEQYLHDQV*PMLLLHAPPSSCPQ
Trigger: CTGTGGACAAGAGGAAGGCGGAGCGTGAAGTAAAAGCATTGGCAAAACTTGATCATGTAAATATTGTTCACTACAATGGCTGTTGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405334.5
CDS TCA 72 bp ACGGTATGTATTAAGTTCCTCCATGAAGAAACCTGCTaGAAGATCACCAGCCATTTCTTCTTCCCGTATCCT +
Preference number: 6 (lower is better)
Translates to: TVCIKFLHEETC*KITSHFFFPYP
Trigger: AGGATACGGGAAGAAGAAATGGCTGGTGATCTTTCAGCAGGTTTCTTCATGGAGGAACTTAATACATACCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000411537.7
ENST00000647926.1
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681329.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS CAA 90 bp AAGAAATCTGTTCTGGGCTCATGTATCGCAAAGTTCCCTTACTCCTaGTTCGCTTTCCATCATTTTTCAGAGATGTTACAAGTCCAAAGT +
Preference number: 6 (lower is better)
Translates to: KKSVLGSCIAKFPYS*FAFHHFSEMLQVQS
Trigger: ACTTTGGACTTGTAACATCTCTGAAAAATGATGGAAAGCGAACAAGGAGTAAGGGAACTTTGCGATACATGAGCCCAGAACAGATTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000405334.5
ENST00000647926.1
ENST00000679507.1
ENST00000680273.1
ENST00000681329.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS TCA 72 bp AAACAATGTCTATTTATTAGCAAAATCTGTGGAGTCTaGCTGCCTAGGTTCAAATCTGTACCGCCGAATAGC +
Preference number: 6 (lower is better)
Translates to: KQCLFISKICGV*LPRFKSVPPNS
Trigger: GCTATTCGGCGGTACAGATTTGAACCTAGGCAGTCAGACTCCACAGATTTTGCTAATAAATAGACATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462861.1
CDS GCA 72 bp AATGTCTATTTATTAGCAAAATCTGTGGAGTCTGACTaGCTAGGTTCAAATCTGTACCGCCGAATAGCTGAA +
Preference number: 6 (lower is better)
Translates to: NVYLLAKSVESD*LGSNLYRRIAE
Trigger: TTCAGCTATTCGGCGGTACAGATTTGAACCTAGGCAGTCAGACTCCACAGATTTTGCTAATAAATAGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462861.1
CDS CAA 72 bp AGCCATTGTAGTGAACAATATTTACATGATCAAGTTTaGCCAATGCTTTTACTTCACGCTCCGCCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: SHCSEQYLHDQV*PMLLLHAPPSS
Trigger: AGAGGAAGGCGGAGCGTGAAGTAAAAGCATTGGCAAAACTTGATCATGTAAATATTGTTCACTACAATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405334.5
CDS CAA 72 bp GTCAAATCTGGGTGCCAAAGATCTTTTTGCCTTCCTTaGATTATTTCTGAGACCATTCATAAGCAACGAAGA +
Preference number: 6 (lower is better)
Translates to: VKSGCQRSFCLP*IISETIHKQRR
Trigger: TCTTCGTTGCTTATGAATGGTCTCAGAAATAATCAAAGGAAGGCAAAAAGATCTTTGGCACCCAGATTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000405334.5
ENST00000411537.7
ENST00000647926.1
ENST00000679507.1
ENST00000679979.1
ENST00000681329.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS TCA 72 bp AACTTGAAATGTAAACCTCCTATCATGTGGAGGTCCTaGATTAGGCAGTTCTTGATATTTAAGTACTACTCC +
Preference number: 6 (lower is better)
Translates to: NLKCKPPIMWRS*IRQFLIFKYYS
Trigger: GGAGTAGTACTTAAATATCAAGAACTGCCTAATTCAGGACCTCCACATGATAGGAGGTTTACATTTCAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000233057.9
ENST00000395127.6
ENST00000405334.5
ENST00000411537.7
ENST00000647926.1
ENST00000679507.1
ENST00000679979.1
ENST00000680273.1
ENST00000681329.1
ENST00000681463.1
ENST00000681507.1
ENST00000681516.1
CDS TCA 72 bp TCAATGCATAATGATACTCACCTTTTTGCCTTCCTTTaGTTATTTCTGAGACCATTCATAAGCAACGAAGAA +
Preference number: 6 (lower is better)
Translates to: SMHNDTHLFAFL*LFLRPFISNEE
Trigger: TTCTTCGTTGCTTATGAATGGTCTCAGAAATAATCAAAGGAAGGCAAAAAGGTGAGTATCATTATGCATTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496059.1