RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF1AD (Homo sapiens)

Ensembl gene IDs: ENSG00000175376

Ensembl transcript IDs: ENST00000312234.6, ENST00000525767.5, ENST00000526449.1, ENST00000526451.5, ENST00000527051.1, ENST00000527249.5, ENST00000529964.5, ENST00000529973.1, ENST00000530462.5, ENST00000532707.5, ENST00000533544.6

Found 380 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCAAGCAGGCAAGGAAGCAGGAGTGCTCCCAGCTGTTAAACACATaGAAGAAGGCCCAGAGCACGGCCTGGCACTTTCTAAGTGCCCAA +
Preference number: 1 (lower is better)
Translates to: CKQARKQECSQLLNT*KKAQSTAWHFLSAQ
Trigger: TTGGGCACTTAGAAAGTGCCAGGCCGTGCTCTGGGCCTTCTTGCATGTGTTTAACAGCTGGGAGCACTCCTGCTTCCTTGCCTGCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR GCA 90 bp AGGTTTAAGTCCCATTGGCTTACGACAGGAAGATATGTGCACATCTaGAGAGCTGGTAACAGGGAGGCAGGCATTCCCTCTGATGGTTGC +
Preference number: 1 (lower is better)
Translates to: RFKSHWLTTGRYVHI*RAGNREAGIPSDGC
Trigger: GCAACCATCAGAGGGAATGCCTGCCTCCCTGTTACCAGCTCTGCAGATGTGCACATATCTTCCTGTCGTAAGCCAATGGGACTTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR GCA 90 bp AAACACATGCAAGAAGGCCCAGAGCACGGCCTGGCACTTTCTAAGTaGCCAATAAGAAAGAACAAACCACCTGGGAAAGACTCCAGCCAT +
Preference number: 1 (lower is better)
Translates to: KHMQEGPEHGLALSK*PIRKNKPPGKDSSH
Trigger: ATGGCTGGAGTCTTTCCCAGGTGGTTTGTTCTTTCTTATTGGGCACTTAGAAAGTGCCAGGCCGTGCTCTGGGCCTTCTTGCATGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR GCA 90 bp AAGGATAGAGAGATTTGCCAGCCACCTTCTGGAAGTGATAGATGGTaGAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACAGTA +
Preference number: 1 (lower is better)
Translates to: KDREICQPPSGSDRW*RVGEMRSYVGMDTV
Trigger: TACTGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACTTCCAGAAGGTGGCTGGCAAATCTCTCTATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR CCA 90 bp GTTAAGGATAGAGAGATTTGCCAGCCACCTTCTGGAAGTGATAGATaGTGCAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACA +
Preference number: 1 (lower is better)
Translates to: VKDREICQPPSGSDR*CRVGEMRSYVGMDT
Trigger: TGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACTTCCAGAAGGTGGCTGGCAAATCTCTCTATCCTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR GCA 90 bp GGAGATGGATGGACCATTCAAAACAAAGTTAAGGATAGAGAGATTTaGCAGCCACCTTCTGGAAGTGATAGATGGTGCAGAGTGGGAGAG +
Preference number: 1 (lower is better)
Translates to: GDGWTIQNKVKDREI*QPPSGSDRWCRVGE
Trigger: CTCTCCCACTCTGCACCATCTATCACTTCCAGAAGGTGGCTGGCAAATCTCTCTATCCTTAACTTTGTTTTGAATGGTCCATCCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp CCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGCCAGGGGCCAGTCCCTaGGCAAGTGGAGAATTGGGT +
Preference number: 2 (lower is better)
Translates to: PPPREPLRHQNKSPTHQGPGASP*ASGELG
Trigger: ACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGG...CCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCCCAGGGGCCAGTCCCTaGGCAAGTGGAGAATTGGGT +
Preference number: 2 (lower is better)
Translates to: SERSPALSSCRGEDVQSTPGASP*ASGELG
Trigger: ACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGG...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTTCAGAGAGGAGCCCTaGTTTGTCCTCATGCAGGGG +
Preference number: 2 (lower is better)
Translates to: SPERATQTPEQVTNPPGVFREEP*FVLMQG
Trigger: CCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGAA...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp AGTGATAGATGGTGCAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACAGGCACCATGGGCTCCTaGGCGTCTCTTAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: SDRWCRVGEMRSYVGMDTGTMGS*ASLRGR
Trigger: CCTGCCTCTAAGAGACGCTCAGGAGCCCATGGTGCC...TGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGACCTGCTTTGTCCTCATaGAGGGGTGAAGATGTGCAG +
Preference number: 2 (lower is better)
Translates to: EVSTPVHRVTRKAGRTARPALSS*RGEDVQ
Trigger: CTGCACATCTTCACCCCTGCATGAGGACAAAGCAGG...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp CTAGAAAGGCGGGGAGAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTACCTGCTTTGTCCTCATaGAGGGGTGAAGATGTGCAG +
Preference number: 2 (lower is better)
Translates to: LERRGEQHEAPWAPERLLPALSS*RGEDVQ
Trigger: CTGCACATCTTCACCCCTGCATGAGGACAAAGCAGG...TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTCTCCCCGCCTTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTCAGTCCCTGAGCAAGTaGAGAATTGGGTCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: SPERATQTPEQVTNPPGVQSLSK*RIGSWS
Trigger: ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTG...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp AGTGATAGATGGTGCAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACACCAGGGGCCAGTCCCTaGGCAAGTGGAGAATTGGGT +
Preference number: 2 (lower is better)
Translates to: SDRWCRVGEMRSYVGMDTPGASP*ASGELG
Trigger: ACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGG...TGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCCAGTCCCTGAGCAAGTaGAGAATTGGGTCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: SERSPALSSCRGEDVQSTQSLSK*RIGSWS
Trigger: ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTG...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp TCAGAATCATCTTCTGAGCTGGACTCCTCTCCTGATAACTGTGGCTCAGCTGGGCAAAACCCCTCCTTCTaGAGAGAGCGCACGTGGTCC +
Preference number: 2 (lower is better)
Translates to: SESSSELDSSPDNCGSAGQNPSF*RERTWS
Trigger: GGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTG...CCCAGCTGAGCCACAGTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529973.1
3UTR-3UTR CCA 90 bp AGTGATAGATGGTGCAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACACAGCACGAGGCACCATaGGCTCCTGAGCGTCTCTTA +
Preference number: 2 (lower is better)
Translates to: SDRWCRVGEMRSYVGMDTQHEAP*APERLL
Trigger: TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTG...TGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp TGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAAGGCAGAAGGGTCCTCATGCAGGGGTaGAGATGTGCAGAGCACCCT +
Preference number: 2 (lower is better)
Translates to: CRVDYGIDATQEGSEGRRVLMQG*RCAEHP
Trigger: AGGGTGCTCTGCACATCTTCACCCCTGCATGAGGAC...CCTTCTGCCTTCACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCACACAGTAGCTGGAGGTaGGCACTCCCGTACACAGGG +
Preference number: 2 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKAHSSWR*ALPYTG
Trigger: CCCTGTGTACGGGAGTGCTCACCTCCAGCTACTGTG...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp GTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTTAGTGTCCATCCACAGTAGCTGGAGGTaGGCACTCCCGTACACAGGG +
Preference number: 2 (lower is better)
Translates to: VLKQTSQSRSAGQCLVSIHSSWR*ALPYTG
Trigger: CCCTGTGTACGGGAGTGCTCACCTCCAGCTACTGTG...GATGGACACTAAGCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp CCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATCCTGCTTTGTCCTCATaGAGGGGTGAAGATGTGCAG +
Preference number: 2 (lower is better)
Translates to: PREPLRHQNKSPTHQGFNPALSS*RGEDVQ
Trigger: CTGCACATCTTCACCCCTGCATGAGGACAAAGCAGG...ATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CCA 90 bp GAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAGAGGCAGGTGGGTGTAAAGAACAAACCACCTaGGAAAGACTCCAGCCATTT +
Preference number: 2 (lower is better)
Translates to: EQHEAPWAPERLLEAGGCKEQTT*ERLQPF
Trigger: AAATGGCTGGAGTCTTTCCCAGGTGGTTTGTTCTTT...ACACCCACCTGCCTCTAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp CTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATTCTCTGAATCAACCAGGGGCCAGTCCCTaGGCAAGTGGAGAATTGGGT +
Preference number: 2 (lower is better)
Translates to: LRHQNKSPTHQGFNSLNQPGASP*ASGELG
Trigger: ACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGG...TTGATTCAGAGAATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
3UTR CAA 90 bp GTGGCCAGGCTGGCTGTTTTCTCACCTAATGATGGTGACTTGGGTTaGGGCACAGAGGTGAATGATTGGGTTTACCCAGGGTTAGGGTTT +
Preference number: 2 (lower is better)
Translates to: VARLAVFSPNDGDLG*GTEVNDWVYPGLGF
Trigger: AAACCCTAACCCTGGGTAAACCCAATCATTCACCTCTGTGCCCAAACCCAAGTCACCATCATTAGGTGAGAAAACAGCCAGCCTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR CAA 90 bp CAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTAATGATGGTGACTaGGGTTTGGGCACAGAGGTGAATGATTGGGTTTACCCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: QLVARLAVFSPNDGD*GLGTEVNDWVYPGL
Trigger: TAACCCTGGGTAAACCCAATCATTCACCTCTGTGCCCAAACCCAAGTCACCATCATTAGGTGAGAAAACAGCCAGCCTGGCCACCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp CTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATTCTCTGAATCAAGTCCTCATGCAGGGGTaGAGATGTGCAGAGCACCCT +
Preference number: 2 (lower is better)
Translates to: LRHQNKSPTHQGFNSLNQVLMQG*RCAEHP
Trigger: AGGGTGCTCTGCACATCTTCACCCCTGCATGAGGAC...TTGATTCAGAGAATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCGTCCTCATGCAGGGGTaGAGATGTGCAGAGCACCCT +
Preference number: 2 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCVLMQG*RCAEHP
Trigger: AGGGTGCTCTGCACATCTTCACCCCTGCATGAGGAC...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp TGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTCTCCCGTACACAGGGTaGCTAGAAAGGCGGGGAGAA +
Preference number: 2 (lower is better)
Translates to: CNDKRKVQLVARLAVFSPLPYTG*LERRGE
Trigger: TTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAG...AGGTGAGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGCAGCTGTTAAACACATaGAAGAAGGCCCAGAGCACG +
Preference number: 2 (lower is better)
Translates to: RQRGVGWTTELMLHKREVQLLNT*KKAQST
Trigger: CGTGCTCTGGGCCTTCTTGCATGTGTTTAACAGCTG...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGGCAAGGAAGCAGGAGTaGTCCCAGCTGTTAAACACA +
Preference number: 2 (lower is better)
Translates to: RQRGVGWTTELMLHKREVARKQE*SQLLNT
Trigger: TGTGTTTAACAGCTGGGAGCACTCCTGCTTCCTTGC...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp AGTGATAGATGGTGCAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACAGCAAGGAAGCAGGAGTaGTCCCAGCTGTTAAACACA +
Preference number: 2 (lower is better)
Translates to: SDRWCRVGEMRSYVGMDTARKQE*SQLLNT
Trigger: TGTGTTTAACAGCTGGGAGCACTCCTGCTTCCTTGC...TGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCACCAGGGGCCAGTCCCTaGGCAAGTGGAGAATTGGGT +
Preference number: 2 (lower is better)
Translates to: MGDSTARSTLTHHIHNISPGASP*ASGELG
Trigger: ACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGG...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp TGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAAGGCAGAAGGCAGCTGTTAAACACATaGAAGAAGGCCCAGAGCACG +
Preference number: 2 (lower is better)
Translates to: CRVDYGIDATQEGSEGRRQLLNT*KKAQST
Trigger: CGTGCTCTGGGCCTTCTTGCATGTGTTTAACAGCTG...CCTTCTGCCTTCACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CCA 90 bp TGTCATCCTGAATGCTTAAATTGGTATGAACTGCAAGCAGGCAAGGAAGCAGGAGCCCAGAGCACGGCCTaGCACTTTCTAAGTGCCCAA +
Preference number: 2 (lower is better)
Translates to: CHPECLNWYELQAGKEAGAQSTA*HFLSAQ
Trigger: TTGGGCACTTAGAAAGTGCCAGGCCGTGCTCTGGGC...TCCTGCTTCCTTGCCTGCTTGCAGTTCATACCAATTTAAGCATTCAGGATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CCA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCATCTCTTAGAGGCAGGTaGGTGTTAGGTCCTAGGGCT +
Preference number: 2 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKASLRGR*VLGPRA
Trigger: AGCCCTAGGACCTAACACCCACCTGCCTCTAAGAGA...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CCA 90 bp GTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTTAGTGTCCATCACTAGCGGAACAGAATaGAGGGAGACAGAGGGGTGT +
Preference number: 2 (lower is better)
Translates to: VLKQTSQSRSAGQCLVSITSGTE*RETEGC
Trigger: ACACCCCTCTGTCTCCCTCCATTCTGTTCCGCTAGT...GATGGACACTAAGCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCGGGCACAGAGGTGAATaGTTGGGTTTACCCAGGGTT +
Preference number: 2 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCGHRGE*LGLPRV
Trigger: AACCCTGGGTAAACCCAATCATTCACCTCTGTGCCC...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCACAGCTGTTAAACACATaGAAGAAGGCCCAGAGCACG +
Preference number: 2 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKAQLLNT*KKAQST
Trigger: CGTGCTCTGGGCCTTCTTGCATGTGTTTAACAGCTG...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAAGGATAGAGAGATTTaGCAGCCACCTTCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: RQRGVGWTTELMLHKREVKDREI*QPPSGS
Trigger: ACTTCCAGAAGGTGGCTGGCAAATCTCTCTATCCTT...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CCA 90 bp CTCTTCACTCTCCTCCTCACTCTCATGATACTGTCTGCGGTTTGTGTTAACAAATGCAGAGAGCGCACGTaGTCCTTGCAGAGCACAAAC +
Preference number: 2 (lower is better)
Translates to: LFTLLLTLMILSAVCVNKCRERT*SLQSTN
Trigger: GTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCA...TTTGTTAACACAAACCGCAGACAGTATCATGAGAGTGAGGAGGAGAGTGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529973.1
3UTR-3UTR CCA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGCAGCACGAGGCACCATaGGCTCCTGAGCGTCTCTTA +
Preference number: 2 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPQHEAP*APERLL
Trigger: TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTG...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp GTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTTAGTGTCCATCTACACAAGAGGGAAGTaGAGGCAGAAGGTTACTCAT +
Preference number: 2 (lower is better)
Translates to: VLKQTSQSRSAGQCLVSIYTRGK*RQKVTH
Trigger: ATGAGTAACCTTCTGCCTTCACTTCCCTCTTGTGTA...GATGGACACTAAGCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCAGGGCACAGAGGTGAATaGTTGGGTTTACCCAGGGTT +
Preference number: 2 (lower is better)
Translates to: MGDSTARSTLTHHIHNISGHRGE*LGLPRV
Trigger: AACCCTGGGTAAACCCAATCATTCACCTCTGTGCCC...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCACCTGCTTTGTCCTCATaGAGGGGTGAAGATGTGCAG +
Preference number: 2 (lower is better)
Translates to: MGDSTARSTLTHHIHNISPALSS*RGEDVQ
Trigger: CTGCACATCTTCACCCCTGCATGAGGACAAAGCAGG...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp GTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTTAGTGTCCATCAAGGATAGAGAGATTTaGCAGCCACCTTCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: VLKQTSQSRSAGQCLVSIKDREI*QPPSGS
Trigger: ACTTCCAGAAGGTGGCTGGCAAATCTCTCTATCCTT...GATGGACACTAAGCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp CTCTTCACTCTCCTCCTCACTCTCATGATACTGTCTGCGGTTTGTGTTAACAAAAGCGCACGTGGTCCTTaGAGAGCACAAACGAGATTT +
Preference number: 2 (lower is better)
Translates to: LFTLLLTLMILSAVCVNKSARGP*RAQTRF
Trigger: AAATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCT...TTTGTTAACACAAACCGCAGACAGTATCATGAGAGTGAGGAGGAGAGTGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529973.1
3UTR-3UTR CCA 90 bp TGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAAGGCAGAAGGCCTGAATGCTTAAATTaGTATGAACTGCAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: CRVDYGIDATQEGSEGRRPECLN*YELQAG
Trigger: GCCTGCTTGCAGTTCATACCAATTTAAGCATTCAGG...CCTTCTGCCTTCACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCATCTCTTAGAGGCAGGTaGGTGTTAGGTCCTAGGGCT +
Preference number: 2 (lower is better)
Translates to: MGDSTARSTLTHHIHNISSLRGR*VLGPRA
Trigger: AGCCCTAGGACCTAACACCCACCTGCCTCTAAGAGA...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp GTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTTAGTGTCCATCATGCTTAAATTGGTATaGACTGCAAGCAGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: VLKQTSQSRSAGQCLVSIMLKLV*TASRQG
Trigger: TCCTTGCCTGCTTGCAGTTCATACCAATTTAAGCAT...GATGGACACTAAGCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CCA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGCAGTCCCTGAGCAAGTaGAGAATTGGGTCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPQSLSK*RIGSWS
Trigger: ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTG...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CCA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCACCTGAATGCTTAAATTaGTATGAACTGCAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKAPECLN*YELQAG
Trigger: GCCTGCTTGCAGTTCATACCAATTTAAGCATTCAGG...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCAAGATATGTGCACATCTaGAGAGCTGGTAACAGGGAG +
Preference number: 2 (lower is better)
Translates to: MGDSTARSTLTHHIHNISRYVHI*RAGNRE
Trigger: CTCCCTGTTACCAGCTCTGCAGATGTGCACATATCT...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCCCTGAATGCTTAAATTaGTATGAACTGCAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCPECLN*YELQAG
Trigger: GCCTGCTTGCAGTTCATACCAATTTAAGCATTCAGG...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp TGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTGGCTGTCATCCTGAATaGTTAAATTGGTATGAACTG +
Preference number: 2 (lower is better)
Translates to: CNDKRKVQLVARLAVFSPGCHPE*LNWYEL
Trigger: CAGTTCATACCAATTTAAGCATTCAGGATGACAGCC...AGGTGAGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGCGACAGGAAGATATGTaGACATCTGCAGAGCTGGTA +
Preference number: 2 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPRQEDM*TSAELV
Trigger: TACCAGCTCTGCAGATGTGCACATATCTTCCTGTCG...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR TCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCAATGCTTAAATTGGTATaGACTGCAAGCAGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: MGDSTARSTLTHHIHNISMLKLV*TASRQG
Trigger: TCCTTGCCTGCTTGCAGTTCATACCAATTTAAGCAT...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCCTGGCACTTTCTAAGTaGCCAATAAGAAAGAACAAA +
Preference number: 2 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCLALSK*PIRKNK
Trigger: TTTGTTCTTTCTTATTGGGCACTTAGAAAGTGCCAG...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CCA 90 bp GTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTTAGTGTCCATCAATAAAGTCAGGAGATaGATGGACCATTCAAAACAA +
Preference number: 2 (lower is better)
Translates to: VLKQTSQSRSAGQCLVSINKVRR*MDHSKQ
Trigger: TTGTTTTGAATGGTCCATCCATCTCCTGACTTTATT...GATGGACACTAAGCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR GCA 90 bp AGGTTTGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCTGGCACTTTCTAAGTaGCCAATAAGAAAGAACAAA +
Preference number: 2 (lower is better)
Translates to: RFVMINVRYNWWPGWLFSLALSK*PIRKNK
Trigger: TTTGTTCTTTCTTATTGGGCACTTAGAAAGTGCCAG...AGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR GCA 72 bp GCAAGGAAGCAGGAGTGCTCCCAGCTGTTAAACACATaGAAGAAGGCCCAGAGCACGGCCTGGCACTTTCTA +
Preference number: 3 (lower is better)
Translates to: ARKQECSQLLNT*KKAQSTAWHFL
Trigger: TAGAAAGTGCCAGGCCGTGCTCTGGGCCTTCTTGCATGTGTTTAACAGCTGGGAGCACTCCTGCTTCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR CCA 72 bp GCGGAACAGAATGGAGGGAGACAGAGGGGTGTAGGGTaGACTACGGAATTGATGCTACACAAGAGGGAAGTG +
Preference number: 3 (lower is better)
Translates to: AEQNGGRQRGVG*TTELMLHKREV
Trigger: CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCTCCCTCCATTCTGTTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR GCA 72 bp GAGATTTGCCAGCCACCTTCTGGAAGTGATAGATGGTaGAGAGTGGGAGAGATGAGGTCGTATGTGGGGATG +
Preference number: 3 (lower is better)
Translates to: EICQPPSGSDRW*RVGEMRSYVGM
Trigger: CATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACTTCCAGAAGGTGGCTGGCAAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR GCA 72 bp TCCCATTGGCTTACGACAGGAAGATATGTGCACATCTaGAGAGCTGGTAACAGGGAGGCAGGCATTCCCTCT +
Preference number: 3 (lower is better)
Translates to: SHWLTTGRYVHI*RAGNREAGIPS
Trigger: AGAGGGAATGCCTGCCTCCCTGTTACCAGCTCTGCAGATGTGCACATATCTTCCTGTCGTAAGCCAATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR GCA 72 bp CAAGAAGGCCCAGAGCACGGCCTGGCACTTTCTAAGTaGCCAATAAGAAAGAACAAACCACCTGGGAAAGAC +
Preference number: 3 (lower is better)
Translates to: QEGPEHGLALSK*PIRKNKPPGKD
Trigger: GTCTTTCCCAGGTGGTTTGTTCTTTCTTATTGGGCACTTAGAAAGTGCCAGGCCGTGCTCTGGGCCTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR GCA 72 bp ATTGGTATGAACTGCAAGCAGGCAAGGAAGCAGGAGTaGTCCCAGCTGTTAAACACATGCAAGAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: IGMNCKQARKQE*SQLLNTCKKAQ
Trigger: CTGGGCCTTCTTGCATGTGTTTAACAGCTGGGAGCACTCCTGCTTCCTTGCCTGCTTGCAGTTCATACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR GCA 72 bp GGTTTAAGTCCCATTGGCTTACGACAGGAAGATATGTaGACATCTGCAGAGCTGGTAACAGGGAGGCAGGCA +
Preference number: 3 (lower is better)
Translates to: GLSPIGLRQEDM*TSAELVTGRQA
Trigger: TGCCTGCCTCCCTGTTACCAGCTCTGCAGATGTGCACATATCTTCCTGTCGTAAGCCAATGGGACTTAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CAA 90 bp AGGTTTGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCCTAATGATGGTGACTaGGGTTTGGGCACAGAGGTG +
Preference number: 3 (lower is better)
Translates to: RFVMINVRYNWWPGWLFSPNDGD*GLGTEV
Trigger: CACCTCTGTGCCCAAACCCAAGTCACCATCATTAGG...AGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CAA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGCCTAATGATGGTGACTaGGGTTTGGGCACAGAGGTG +
Preference number: 3 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPPNDGD*GLGTEV
Trigger: CACCTCTGTGCCCAAACCCAAGTCACCATCATTAGG...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR-3UTR CAA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGGATGGTGACTTGGGTTaGGGCACAGAGGTGAATGAT +
Preference number: 3 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPDGDLG*GTEVND
Trigger: ATCATTCACCTCTGTGCCCAAACCCAAGTCACCATC...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR CCA 72 bp GTCTCCAAAACACAAGAGGTAAGGTTTAAGTCCCATTaGCTTACGACAGGAAGATATGTGCACATCTGCAGA +
Preference number: 3 (lower is better)
Translates to: VSKTQEVRFKSH*LTTGRYVHICR
Trigger: TCTGCAGATGTGCACATATCTTCCTGTCGTAAGCCAATGGGACTTAAACCTTACCTCTTGTGTTTTGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR CCA 72 bp GGAATAATCAGGTTTCAAATAAAGTCAGGAGATGGATaGACCATTCAAAACAAAGTTAAGGATAGAGAGATT +
Preference number: 3 (lower is better)
Translates to: GIIRFQIKSGDG*TIQNKVKDREI
Trigger: AATCTCTCTATCCTTAACTTTGTTTTGAATGGTCCATCCATCTCCTGACTTTATTTGAAACCTGATTATTCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CTAGAAAGGCGGGGAGAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAGGCTCCCAGGAACGCTaGCGGAGCAACACCGCCGTC +
Preference number: 4 (lower is better)
Translates to: LERRGEQHEAPWAPERLLGSQER*RSNTAV
Trigger: GACGGCGGTGTTGCTCCGGCAGCGTTCCTGGGAGCC...TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTCTCCCCGCCTTTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312234.6
ENST00000533544.6
CDS-3UTR GCA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGAGGCTCCCAGGAACGCTaGCGGAGCAACACCGCCGTC +
Preference number: 4 (lower is better)
Translates to: EVSTPVHRVTRKAGRTARGSQER*RSNTAV
Trigger: GACGGCGGTGTTGCTCCGGCAGCGTTCCTGGGAGCC...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312234.6
ENST00000533544.6
CDS-3UTR TCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTTGGCCTGAGACATGCTaGAGTCGTCCCACACGGCGG +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSWPETC*SRPTRR
Trigger: CCGCCGTGTGGGACGACTTCAGCATGTCTCAGGCCA...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529964.5
CDS-3UTR GCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTCTCACCAGGAAGCGCTaGCCTTGGGCTGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSLTRKR*PWAVST
Trigger: GGTGGAGACAGCCCAAGGGCAGCGCTTCCTGGTGAG...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTCCAGGGGCCAGTCCCTaGGCAAGTGGAGAATTGGGT +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSPGASP*ASGELG
Trigger: ACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGG...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR TCA 90 bp GAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAGAGGCAGGTGGGTGTCCAGGGGCCAGTCCCTaGGCAAGTGGAGAATTGGGT +
Preference number: 4 (lower is better)
Translates to: EQHEAPWAPERLLEAGGCPGASP*ASGELG
Trigger: ACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGG...ACACCCACCTGCCTCTAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGAGGCACCATGGGCTCCTaGGCGTCTCTTAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: EVSTPVHRVTRKAGRTARGTMGS*ASLRGR
Trigger: CCTGCCTCTAAGAGACGCTCAGGAGCCCATGGTGCC...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGCTCCCGTACACAGGGTaGCTAGAAAGGCGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: PPPREPLRHQNKSPTHQGLPYTG*LERRGE
Trigger: TTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAG...CCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTCTCACCAGGAAGCGCTaGCCTTGGGCTGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: SPERATQTPEQVTNPPGVLTRKR*PWAVST
Trigger: GGTGGAGACAGCCCAAGGGCAGCGCTTCCTGGTGAG...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGCAAAACCCCTCCTTCTaGAGAGAGCGCACGTGGTCC +
Preference number: 4 (lower is better)
Translates to: PPPREPLRHQNKSPTHQGQNPSF*RERTWS
Trigger: GGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTG...CCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTGTCCTCATGCAGGGGTaGAGATGTGCAGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSVLMQG*RCAEHP
Trigger: AGGGTGCTCTGCACATCTTCACCCCTGCATGAGGAC...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCGGCACCATGGGCTCCTaGGCGTCTCTTAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTGTMGS*ASLRGR
Trigger: CCTGCCTCTAAGAGACGCTCAGGAGCCCATGGTGCC...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGACACAGTAGCTGGAGGTaGGCACTCCCGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: EVSTPVHRVTRKAGRTARHSSWR*ALPYTG
Trigger: CCCTGTGTACGGGAGTGCTCACCTCCAGCTACTGTG...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGAGGTGGGTGGACCACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: EVSTPVHRVTRKAGRTARGGWTT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGGTCCACCCACC...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTTCGGAGGGCACTATGTaGTCCCCTAGCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSSEGTM*SPSTSF
Trigger: GAAGGAGGTGCTAGGGGAGCACATAGTGCCCTCCGA...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTCAAAACCCCTCCTTCTaGAGAGAGCGCACGTGGTCC +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSQNPSF*RERTWS
Trigger: GGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTG...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTCCTGGAGTCTCAGGCTaGCTCCTCCTCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSPGVSG*LLLFTL
Trigger: GAGAGTGAAGAGGAGGAGGCAGCCTGAGACTCCAGG...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CTAGAAAGGCGGGGAGAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTACACCGCCGTCTAGGCTaGACGCTGAGAGAGGATCGT +
Preference number: 4 (lower is better)
Translates to: LERRGEQHEAPWAPERLLHRRLG*TLREDR
Trigger: ACGATCCTCTCTCAGCGTCCAGCCTAGACGGCGGTG...TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTCTCCCCGCCTTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312234.6
ENST00000533544.6
CDS-3UTR CCA 90 bp CCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGCTGACAATCTGCTGCTaGTCGGAGGGCACTATGTGC +
Preference number: 4 (lower is better)
Translates to: PPPREPLRHQNKSPTHQGLTICC*SEGTMC
Trigger: GCACATAGTGCCCTCCGACCAGCAGCAGATTGTCAG...CCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CTAGAAAGGCGGGGAGAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAAGGAAGCGCTGCCCTTaGGCTGTCTCCACCTCATGC +
Preference number: 4 (lower is better)
Translates to: LERRGEQHEAPWAPERLLRKRCP*AVSTSC
Trigger: GCATGAGGTGGAGACAGCCCAAGGGCAGCGCTTCCT...TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTCTCCCCGCCTTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTGCAGAGAGCGCACGTaGTCCTTGCAGAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: PPPREPLRHQNKSPTHQGCRERT*SLQSTN
Trigger: GTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCA...CCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp GAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAGAGGCAGGTGGGTGTCAGCACGAGGCACCATaGGCTCCTGAGCGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: EQHEAPWAPERLLEAGGCQHEAP*APERLL
Trigger: TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTG...ACACCCACCTGCCTCTAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGAGTCAACTCCTCCTCCTaGGTTCCTTGGATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: EVSTPVHRVTRKAGRTARVNSSS*VPWMAG
Trigger: GCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGAC...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTGTCAACTCCTCCTCCTaGGTTCCTTGGATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SPERATQTPEQVTNPPGVVNSSS*VPWMAG
Trigger: GCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGAC...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTTTCCTCTTGGTGGCCTaGGACATGCTGAAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSFLLVA*DMLKSS
Trigger: GGACGACTTCAGCATGTCTCAGGCCACCAAGAGGAA...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CTCAGGCCAAAACCCCTCCTTCTGCAGAGAGCGCACGTGGTCCTTGCAGAGCACTTCCTCTTGGTGGCCTaGGACATGCTGAAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: LRPKPLLLQRAHVVLAEHFLLVA*DMLKSS
Trigger: GGACGACTTCAGCATGTCTCAGGCCACCAAGAGGAA...GTGCTCTGCAAGGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTGGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR GCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTTCCAACTGCGAGGAGTaGGACGTGAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSSNCEE*DVSLSL
Trigger: CAGACTCAGACTCACGTCGCACTCCTCGCAGTTGGA...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTCCCACCAGTCCAACTaGGAGGAGTGCGACGTGAGT +
Preference number: 4 (lower is better)
Translates to: SPERATQTPEQVTNPPGVSHQSN*EECDVS
Trigger: ACTCACGTCGCACTCCTCGCAGTTGGACTGGTGGGA...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTCGGAGGGCACTATGTaGTCCCCTAGCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SPERATQTPEQVTNPPGVSEGTM*SPSTSF
Trigger: GAAGGAGGTGCTAGGGGAGCACATAGTGCCCTCCGA...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp GAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAGAGGCAGGTGGGTGTACCCTGACAATCTGCTaGTGGTCGGAGGGCACTATG +
Preference number: 4 (lower is better)
Translates to: EQHEAPWAPERLLEAGGCTLTIC*WSEGTM
Trigger: CATAGTGCCCTCCGACCAGCAGCAGATTGTCAGGGT...ACACCCACCTGCCTCTAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTACCCTGACAATCTGCTaGTGGTCGGAGGGCACTATG +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSTLTIC*WSEGTM
Trigger: CATAGTGCCCTCCGACCAGCAGCAGATTGTCAGGGT...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp AGGCCTCAGGCCAAAACCCCTCCTTCTGCAGAGAGCGCACGTGGTCCTTGCAGAACCCTGACAATCTGCTaGTGGTCGGAGGGCACTATG +
Preference number: 4 (lower is better)
Translates to: RPQAKTPPSAESARGPCRTLTIC*WSEGTM
Trigger: CATAGTGCCCTCCGACCAGCAGCAGATTGTCAGGGT...TCTGCAAGGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTGGCCTGAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR GCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTGCTGTCTCCACCTCATaGAGATTGTTCCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSAVSTS*RLFPGV
Trigger: GACCCCAGGGAACAATCTGCATGAGGTGGAGACAGC...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp GAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAGAGGCAGGTGGGTGTTTCAGAGAGGAGCCCTaGTTTGTCCTCATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: EQHEAPWAPERLLEAGGCFREEP*FVLMQG
Trigger: CCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGAA...ACACCCACCTGCCTCTAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCCACCGCCGTCTAGGCTaGACGCTGAGAGAGGATCGT +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTHRRLG*TLREDR
Trigger: ACGATCCTCTCTCAGCGTCCAGCCTAGACGGCGGTG...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312234.6
ENST00000533544.6
CDS-3UTR CCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTCTGACAATCTGCTGCTaGTCGGAGGGCACTATGTGC +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSLTICC*SEGTMC
Trigger: GCACATAGTGCCCTCCGACCAGCAGCAGATTGTCAG...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCAGGAAGCGCTGCCCTTaGGCTGTCTCCACCTCATGC +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTRKRCP*AVSTSC
Trigger: GCATGAGGTGGAGACAGCCCAAGGGCAGCGCTTCCT...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTTGCAGAGAGCGCACGTaGTCCTTGCAGAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSCRERT*SLQSTN
Trigger: GTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCA...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGGAGCAAGTGGAGAATTaGGTCCTGGAGTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PPPREPLRHQNKSPTHQGEQVEN*VLESQA
Trigger: AGCCTGAGACTCCAGGACCCAATTCTCCACTTGCTC...CCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTTCCTCTTGGTGGCCTaGGACATGCTGAAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: SPERATQTPEQVTNPPGVFLLVA*DMLKSS
Trigger: GGACGACTTCAGCATGTCTCAGGCCACCAAGAGGAA...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGGCTGGGAGTTCTGGTTaGGTTTGTCTGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PPPREPLRHQNKSPTHQGAGSSG*VCLFLL
Trigger: CAACAGGAACAGACAAACTCAACCAGAACTCCCAGC...CCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp GGCCTCAGGCCAAAACCCCTCCTTCTGCAGAGAGCGCACGTGGTCCTTGCAGAGTCCTCCTCACTCTCATaGTACTGTCTGCGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: GLRPKPLLLQRAHVVLAESSSLS*YCLRFV
Trigger: CACAAACCGCAGACAGTATCATGAGAGTGAGGAGGA...CTCTGCAAGGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTGGCCTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR GCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTCCAACTGCGAGGAGTaGGACGTGAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SPERATQTPEQVTNPPGVSNCEE*DVSLSL
Trigger: CAGACTCAGACTCACGTCGCACTCCTCGCAGTTGGA...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCTCCCACCAGTCCAACTaGGAGGAGTGCGACGTGAGT +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTSHQSN*EECDVS
Trigger: ACTCACGTCGCACTCCTCGCAGTTGGACTGGTGGGA...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCTCGGAGGGCACTATGTaGTCCCCTAGCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTSEGTM*SPSTSF
Trigger: GAAGGAGGTGCTAGGGGAGCACATAGTGCCCTCCGA...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CTAGAAAGGCGGGGAGAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAAGTACCCTGACAATCTaGTGCTGGTCGGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: LERRGEQHEAPWAPERLLSTLTI*CWSEGT
Trigger: AGTGCCCTCCGACCAGCAGCAGATTGTCAGGGTACT...TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTCTCCCCGCCTTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCGGTATTTGGAGGGCATaGTCACCAGGAAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTGIWRA*SPGSAA
Trigger: GGCAGCGCTTCCTGGTGAGCATGCCCTCCAAATACC...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTCCTGCTTTGTCCTCATaGAGGGGTGAAGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSPALSS*RGEDVQ
Trigger: CTGCACATCTTCACCCCTGCATGAGGACAAAGCAGG...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCAGAATCATCTTCTGAGCTGGACTCCTCTCCTGATAACTGTGGCTCAGCTGGGGTCCCCAGGAAGCGCTaGCCTTGGGCTGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: SESSSELDSSPDNCGSAGVPRKR*PWAVST
Trigger: GGTGGAGACAGCCCAAGGGCAGCGCTTCCTGGGGAC...CCCAGCTGAGCCACAGTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR CCA 90 bp TCACAATCTCCCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACAGGAAGCGCTGCCCTTaGGCTGTCTCCACCTCATGC +
Preference number: 4 (lower is better)
Translates to: SQSPSPERATQTPEQVTNRKRCP*AVSTSC
Trigger: GCATGAGGTGGAGACAGCCCAAGGGCAGCGCTTCCT...GTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGGGAGATTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTGAGCAAGTGGAGAATTaGGTCCTGGAGTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSEQVEN*VLESQA
Trigger: AGCCTGAGACTCCAGGACCCAATTCTCCACTTGCTC...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTCAGTCCCTGAGCAAGTaGAGAATTGGGTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSQSLSK*RIGSWS
Trigger: ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTG...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCCAGCACGAGGCACCATaGGCTCCTGAGCGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTQHEAP*APERLL
Trigger: TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTG...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCTTCCTCTTGGTGGCCTaGGACATGCTGAAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTFLLVA*DMLKSS
Trigger: GGACGACTTCAGCATGTCTCAGGCCACCAAGAGGAA...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTGAAAGTCCCCTCTCTTaGTCCAGATGTTCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSESPLS*SRCSCG
Trigger: ACCGCAAGAACATCTGGATCAAGAGAGGGGACTTTC...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTGCTGGGAGTTCTGGTTaGGTTTGTCTGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSAGSSG*VCLFLL
Trigger: CAACAGGAACAGACAAACTCAACCAGAACTCCCAGC...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTTCCTCCTCACTCTCATaGTACTGTCTGCGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSSSSLS*YCLRFV
Trigger: CACAAACCGCAGACAGTATCATGAGAGTGAGGAGGA...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGGGCAGGCATTCCCTCTaGTGGTTGCTGTTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: PPPREPLRHQNKSPTHQGGRHSL*WLLFLN
Trigger: ATTAAGAAACAGCAACCATCAGAGGGAATGCCTGCC...CCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCTCCAACTGCGAGGAGTaGGACGTGAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTSNCEE*DVSLSL
Trigger: CAGACTCAGACTCACGTCGCACTCCTCGCAGTTGGA...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCACCCTGACAATCTGCTaGTGGTCGGAGGGCACTATG +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTTLTIC*WSEGTM
Trigger: CATAGTGCCCTCCGACCAGCAGCAGATTGTCAGGGT...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCAGTACCCTGACAATCTaGTGCTGGTCGGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTSTLTI*CWSEGT
Trigger: AGTGCCCTCCGACCAGCAGCAGATTGTCAGGGTACT...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCGCTGTCTCCACCTCATaGAGATTGTTCCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTAVSTS*RLFPGV
Trigger: GACCCCAGGGAACAATCTGCATGAGGTGGAGACAGC...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCTTCAGAGAGGAGCCCTaGTTTGTCCTCATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTFREEP*FVLMQG
Trigger: CCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGAA...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGCGACAGGAAGATATGTaGACATCTGCAGAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: PPPREPLRHQNKSPTHQGRQEDM*TSAELV
Trigger: TACCAGCTCTGCAGATGTGCACATATCTTCCTGTCG...CCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp AGGCCAAAACCCCTCCTTCTGCAGAGAGCGCACGTGGTCCTTGCAGAGCACAAACTGACAATCTGCTGCTaGTCGGAGGGCACTATGTGC +
Preference number: 4 (lower is better)
Translates to: RPKPLLLQRAHVVLAEHKLTICC*SEGTMC
Trigger: GCACATAGTGCCCTCCGACCAGCAGCAGATTGTCAG...TTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR CCA 90 bp CTAGAAAGGCGGGGAGAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAATGCAGATTGTTCCCTaGGGTCCTGAGTACCCTGAC +
Preference number: 4 (lower is better)
Translates to: LERRGEQHEAPWAPERLLMQIVP*GPEYPD
Trigger: GTCAGGGTACTCAGGACCCCAGGGAACAATCTGCAT...TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTCTCCCCGCCTTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTTGTTCTTGCGGTATTTaGAGGGCATGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSCSCGI*RACSPG
Trigger: TCCTGGTGAGCATGCCCTCCAAATACCGCAAGAACA...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCTGGAGAATTGGGTCCTaGAGTCTCAGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTWRIGS*SLRLPP
Trigger: AGGAGGCAGCCTGAGACTCCAGGACCCAATTCTCCA...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CCA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGAGAGCAAGTGGAGAATTaGGTCCTGGAGTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: EVSTPVHRVTRKAGRTAREQVEN*VLESQA
Trigger: AGCCTGAGACTCCAGGACCCAATTCTCCACTTGCTC...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGATCTCTTAGAGGCAGGTaGGTGTTAGGTCCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: EVSTPVHRVTRKAGRTARSLRGR*VLGPRA
Trigger: AGCCCTAGGACCTAACACCCACCTGCCTCTAAGAGA...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp GAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAGAGGCAGGTGGGTGTCAGAGGGGTGTAGGGTaGACTACGGAATTGATGCTA +
Preference number: 4 (lower is better)
Translates to: EQHEAPWAPERLLEAGGCQRGVG*TTELML
Trigger: TAGCATCAATTCCGTAGTCCACCCTACACCCCTCTG...ACACCCACCTGCCTCTAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTGGTAGCTGGAGGACGTaGGAATCAGTACAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSGSWRT*ESVQVF
Trigger: GAAAACCTGTACTGATTCCCACGTCCTCCAGCTACC...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTGAAAGTCCCCTCTCTTaGTCCAGATGTTCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SPERATQTPEQVTNPPGVESPLS*SRCSCG
Trigger: ACCGCAAGAACATCTGGATCAAGAGAGGGGACTTTC...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CTAGAAAGGCGGGGAGAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAGAAAGTCCCCTCTCTTaGTCCAGATGTTCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: LERRGEQHEAPWAPERLLESPLS*SRCSCG
Trigger: ACCGCAAGAACATCTGGATCAAGAGAGGGGACTTTC...TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTCTCCCCGCCTTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATGTCCTCATGCAGGGGTaGAGATGTGCAGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: PREPLRHQNKSPTHQGFNVLMQG*RCAEHP
Trigger: AGGGTGCTCTGCACATCTTCACCCCTGCATGAGGAC...ATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAAGGCAGAAGGGGCACCATGGGCTCCTaGGCGTCTCTTAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CRVDYGIDATQEGSEGRRGTMGS*ASLRGR
Trigger: CCTGCCTCTAAGAGACGCTCAGGAGCCCATGGTGCC...CCTTCTGCCTTCACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTGGCTGGTTAGAAGAATaGAGGGTGAGGGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SPERATQTPEQVTNPPGVGWLEE*RVRVEK
Trigger: CTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCC...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCGGGCACAGAGGTGAATaGTTGGGTTTACCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTGHRGE*LGLPRV
Trigger: AACCCTGGGTAAACCCAATCATTCACCTCTGTGCCC...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp AGTGATAGATGGTGCAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACAGGTGGGTGGACCACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: SDRWCRVGEMRSYVGMDTGGWTT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGGTCCACCCACC...TGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCACAATCTCCCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACGCTGTCTCCACCTCATaGAGATTGTTCCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SQSPSPERATQTPEQVTNAVSTS*RLFPGV
Trigger: GACCCCAGGGAACAATCTGCATGAGGTGGAGACAGC...GTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGGGAGATTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATGGTATTTGGAGGGCATaGTCACCAGGAAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: PREPLRHQNKSPTHQGFNGIWRA*SPGSAA
Trigger: GGCAGCGCTTCCTGGTGAGCATGCCCTCCAAATACC...ATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATCAAAACCCCTCCTTCTaGAGAGAGCGCACGTGGTCC +
Preference number: 4 (lower is better)
Translates to: PREPLRHQNKSPTHQGFNQNPSF*RERTWS
Trigger: GGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTG...ATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCTTCTGAGCTGGACTCCTCTCCTGATAACTGTGGCTCAGCTGGGAGTTCTGGTCAAAACCCCTCCTTCTaGAGAGAGCGCACGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SSELDSSPDNCGSAGSSGQNPSF*RERTWS
Trigger: GGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTG...ACCAGAACTCCCAGCTGAGCCACAGTTATCAGGAGAGGAGTCCAGCTCAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR GCA 90 bp TCACAATCTCCCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACTTCAGAGAGGAGCCCTaGTTTGTCCTCATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SQSPSPERATQTPEQVTNFREEP*FVLMQG
Trigger: CCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGAA...GTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGGGAGATTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CTAGAAAGGCGGGGAGAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTACAGCTGTTAAACACATaGAAGAAGGCCCAGAGCACG +
Preference number: 4 (lower is better)
Translates to: LERRGEQHEAPWAPERLLQLLNT*KKAQST
Trigger: CGTGCTCTGGGCCTTCTTGCATGTGTTTAACAGCTG...TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTCTCCCCGCCTTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCACAATCTCCCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCTGAGTTCCTTGGATaGCAGGCTCAGAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: SQSPSPERATQTPEQVTNPEFLG*QAQNPG
Trigger: TCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGG...GTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGGGAGATTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCACAATCTCCCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCTGACAATCTGCTGCTaGTCGGAGGGCACTATGTGC +
Preference number: 4 (lower is better)
Translates to: SQSPSPERATQTPEQVTNLTICC*SEGTMC
Trigger: GCACATAGTGCCCTCCGACCAGCAGCAGATTGTCAG...GTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGGGAGATTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCATGCAGATTGTTCCCTaGGGTCCTGAGTACCCTGAC +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTMQIVP*GPEYPD
Trigger: GTCAGGGTACTCAGGACCCCAGGGAACAATCTGCAT...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTCGCCTGTTTCAGAAATaGGAGATTCTACAGCACGCT +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSRLFQK*EILQHA
Trigger: AGCGTGCTGTAGAATCTCCCATTTCTGAAACAGGCG...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATATGCAGATTGTTCCCTaGGGTCCTGAGTACCGGCGG +
Preference number: 4 (lower is better)
Translates to: PREPLRHQNKSPTHQGFNMQIVP*GPEYRR
Trigger: CCGCCGGTACTCAGGACCCCAGGGAACAATCTGCAT...ATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525767.5
CDS-3UTR TCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCGAAAGTCCCCTCTCTTaGTCCAGATGTTCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTESPLS*SRCSCG
Trigger: ACCGCAAGAACATCTGGATCAAGAGAGGGGACTTTC...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAAGGCAGAAGGCACAGTAGCTGGAGGTaGGCACTCCCGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: CRVDYGIDATQEGSEGRRHSSWR*ALPYTG
Trigger: CCCTGTGTACGGGAGTGCTCACCTCCAGCTACTGTG...CCTTCTGCCTTCACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CTAGAAAGGCGGGGAGAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAGCAGAAGGTTACTCATaGGAATGTCAGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: LERRGEQHEAPWAPERLLAEGYS*ECQGWL
Trigger: TAACCAGCCCTGACATTCTCATGAGTAACCTTCTGC...TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTCTCCCCGCCTTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGTCCCACCAGTCCAACTaGGAGGAGTGCGACGTGAGT +
Preference number: 4 (lower is better)
Translates to: RQRGVGWTTELMLHKREVSHQSN*EECDVS
Trigger: ACTCACGTCGCACTCCTCGCAGTTGGACTGGTGGGA...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCAGAATCATCTTCTGAGCTGGACTCCTCTCCTGATAACTGTGGCTCAGCTGGGTCGGAGGGCACTATGTaGTCCCCTAGCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SESSSELDSSPDNCGSAGSEGTM*SPSTSF
Trigger: GAAGGAGGTGCTAGGGGAGCACATAGTGCCCTCCGA...CCCAGCTGAGCCACAGTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR GCA 90 bp TCTTCTGAGCTGGACTCCTCTCCTGATAACTGTGGCTCAGCTGGGAGTTCTGGTAGTACCCTGACAATCTaGTGCTGGTCGGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: SSELDSSPDNCGSAGSSGSTLTI*CWSEGT
Trigger: AGTGCCCTCCGACCAGCAGCAGATTGTCAGGGTACT...ACCAGAACTCCCAGCTGAGCCACAGTTATCAGGAGAGGAGTCCAGCTCAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR GCA 90 bp CCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATGCTGTCTCCACCTCATaGAGATTGTTCCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PREPLRHQNKSPTHQGFNAVSTS*RLFPGV
Trigger: GACCCCAGGGAACAATCTGCATGAGGTGGAGACAGC...ATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCAGCGCACGTGGTCCTTaGAGAGCACAAACGAGATTT +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTSARGP*RAQTRF
Trigger: AAATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCT...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCACAATCTCCCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCTGCTTTGTCCTCATaGAGGGGTGAAGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: SQSPSPERATQTPEQVTNPALSS*RGEDVQ
Trigger: CTGCACATCTTCACCCCTGCATGAGGACAAAGCAGG...GTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGGGAGATTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTCGACAGGAAGATATGTaGACATCTGCAGAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SPERATQTPEQVTNPPGVRQEDM*TSAELV
Trigger: TACCAGCTCTGCAGATGTGCACATATCTTCCTGTCG...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGCAGGAACTTAGTCTCTaGCCCTCGGCTCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RQRGVGWTTELMLHKREVQELSL*PSAPRN
Trigger: GTTCCTGGGAGCCGAGGGCCAGAGACTAAGTTCCTG...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312234.6
CDS-3UTR CCA 90 bp CCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATCTGACAATCTGCTGCTaGTCGGAGGGCACTATGTGC +
Preference number: 4 (lower is better)
Translates to: PREPLRHQNKSPTHQGFNLTICC*SEGTMC
Trigger: GCACATAGTGCCCTCCGACCAGCAGCAGATTGTCAG...ATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp AACCCCTCCTTCTGCAGAGAGCGCACGTGGTCCTTGCAGAGCACAAACGAGATTATGCAGATTGTTCCCTaGGGTCCTGAGTACCCTGAC +
Preference number: 4 (lower is better)
Translates to: NPSFCRERTWSLQSTNEIMQIVP*GPEYPD
Trigger: GTCAGGGTACTCAGGACCCCAGGGAACAATCTGCAT...AATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCAGAAGGAGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR CCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCTGTTCTTGCGGTATTTaGAGGGCATGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTCSCGI*RACSPG
Trigger: TCCTGGTGAGCATGCCCTCCAAATACCGCAAGAACA...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CCA 90 bp AGTGATAGATGGTGCAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACAGCCCAGAGCACGGCCTaGCACTTTCTAAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SDRWCRVGEMRSYVGMDTAQSTA*HFLSAQ
Trigger: TTGGGCACTTAGAAAGTGCCAGGCCGTGCTCTGGGC...TGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCCAGAGGGGTGTAGGGTaGACTACGGAATTGATGCTA +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTQRGVG*TTELML
Trigger: TAGCATCAATTCCGTAGTCCACCCTACACCCCTCTG...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCGGTAGCTGGAGGACGTaGGAATCAGTACAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTGSWRT*ESVQVF
Trigger: GAAAACCTGTACTGATTCCCACGTCCTCCAGCTACC...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TCACAATCTCCCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACGAAAGTCCCCTCTCTTaGTCCAGATGTTCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SQSPSPERATQTPEQVTNESPLS*SRCSCG
Trigger: ACCGCAAGAACATCTGGATCAAGAGAGGGGACTTTC...GTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGGGAGATTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TCACAATCTCCCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACGGCTGGTTAGAAGAATaGAGGGTGAGGGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SQSPSPERATQTPEQVTNGWLEE*RVRVEK
Trigger: CTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCC...GTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGGGAGATTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCGCAGAAGGTTACTCATaGGAATGTCAGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTAEGYS*ECQGWL
Trigger: TAACCAGCCCTGACATTCTCATGAGTAACCTTCTGC...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGTCCAACTGCGAGGAGTaGGACGTGAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: RQRGVGWTTELMLHKREVSNCEE*DVSLSL
Trigger: CAGACTCAGACTCACGTCGCACTCCTCGCAGTTGGA...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CAGAATCATCTTCTGAGCTGGACTCCTCTCCTGATAACTGTGGCTCAGCTGGGAGCTGTCTCCACCTCATaGAGATTGTTCCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QNHLLSWTPLLITVAQLGAVSTS*RLFPGV
Trigger: GACCCCAGGGAACAATCTGCATGAGGTGGAGACAGC...TCCCAGCTGAGCCACAGTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR GCA 90 bp CTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATTCTCTGAATCAACTCACCAGGAAGCGCTaGCCTTGGGCTGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LRHQNKSPTHQGFNSLNQLTRKR*PWAVST
Trigger: GGTGGAGACAGCCCAAGGGCAGCGCTTCCTGGTGAG...TTGATTCAGAGAATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTCTCACCAGGAAGCGCTaGCCTTGGGCTGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: CNDKRKVQLVARLAVFSPLTRKR*PWAVST
Trigger: GGTGGAGACAGCCCAAGGGCAGCGCTTCCTGGTGAG...AGGTGAGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCACAATCTCCCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACGCAAGGAAGCAGGAGTaGTCCCAGCTGTTAAACACA +
Preference number: 4 (lower is better)
Translates to: SQSPSPERATQTPEQVTNARKQE*SQLLNT
Trigger: TGTGTTTAACAGCTGGGAGCACTCCTGCTTCCTTGC...GTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGGGAGATTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCAGATATGTGCACATCTaGAGAGCTGGTAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTRYVHI*RAGNRE
Trigger: CTCCCTGTTACCAGCTCTGCAGATGTGCACATATCT...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp AGTGATAGATGGTGCAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACACCTGAGTTCCTTGGATaGCAGGCTCAGAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: SDRWCRVGEMRSYVGMDTPEFLG*QAQNPG
Trigger: TCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGG...TGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCAAGGAAGCGCTGCCCTTaGGCTGTCTCCACCTCATGC +
Preference number: 4 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKARKRCP*AVSTSC
Trigger: GCATGAGGTGGAGACAGCCCAAGGGCAGCGCTTCCT...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CTGTGGCTCAGCTGGGAGTTCTGGTTGAGTTTGTCTGTTCCTGTTGTTGTGTTTAGGAAGCGCTGCCCTTaGGCTGTCTCCACCTCATGC +
Preference number: 4 (lower is better)
Translates to: LWLSWEFWLSLSVPVVVFRKRCP*AVSTSC
Trigger: GCATGAGGTGGAGACAGCCCAAGGGCAGCGCTTCCT...AAACACAACAACAGGAACAGACAAACTCAACCAGAACTCCCAGCTGAGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR CCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGTGGAGAATTGGGTCCTaGAGTCTCAGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RQRGVGWTTELMLHKREVWRIGS*SLRLPP
Trigger: AGGAGGCAGCCTGAGACTCCAGGACCCAATTCTCCA...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAAGGCAGAAGGGCCCAGAGCACGGCCTaGCACTTTCTAAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: CRVDYGIDATQEGSEGRRAQSTA*HFLSAQ
Trigger: TTGGGCACTTAGAAAGTGCCAGGCCGTGCTCTGGGC...CCTTCTGCCTTCACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATACTAGCGGAACAGAATaGAGGGAGACAGAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PREPLRHQNKSPTHQGFNTSGTE*RETEGC
Trigger: ACACCCCTCTGTCTCCCTCCATTCTGTTCCGCTAGT...ATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATGCTGGGAGTTCTGGTTaGGTTTGTCTGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PREPLRHQNKSPTHQGFNAGSSG*VCLFLL
Trigger: CAACAGGAACAGACAAACTCAACCAGAACTCCCAGC...ATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp GTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTTAGTGTCCATCCTCCCGTACACAGGGTaGCTAGAAAGGCGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: VLKQTSQSRSAGQCLVSILPYTG*LERRGE
Trigger: TTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAG...GATGGACACTAAGCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCATCCCACCAGTCCAACTaGGAGGAGTGCGACGTGAGT +
Preference number: 4 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKASHQSN*EECDVS
Trigger: ACTCACGTCGCACTCCTCGCAGTTGGACTGGTGGGA...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCATCGGAGGGCACTATGTaGTCCCCTAGCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKASEGTM*SPSTSF
Trigger: GAAGGAGGTGCTAGGGGAGCACATAGTGCCCTCCGA...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAAGGCAGAAGGAGTACCCTGACAATCTaGTGCTGGTCGGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: CRVDYGIDATQEGSEGRRSTLTI*CWSEGT
Trigger: AGTGCCCTCCGACCAGCAGCAGATTGTCAGGGTACT...CCTTCTGCCTTCACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp GTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTTAGTGTCCATCCCTGGAGTCTCAGGCTaGCTCCTCCTCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: VLKQTSQSRSAGQCLVSIPGVSG*LLLFTL
Trigger: GAGAGTGAAGAGGAGGAGGCAGCCTGAGACTCCAGG...GATGGACACTAAGCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGCCTGCTTTGTCCTCATaGAGGGGTGAAGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: RQRGVGWTTELMLHKREVPALSS*RGEDVQ
Trigger: CTGCACATCTTCACCCCTGCATGAGGACAAAGCAGG...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTAATCATCTTCTGAGCTaGACTCCTCTCCTGATAACT +
Preference number: 4 (lower is better)
Translates to: SPERATQTPEQVTNPPGVNHLLS*TPLLIT
Trigger: AGTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATT...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGAAATCATCTTCTGAGCTaGACTCCTCTCCTGATAACT +
Preference number: 4 (lower is better)
Translates to: EVSTPVHRVTRKAGRTARNHLLS*TPLLIT
Trigger: AGTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATT...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp AGTGATAGATGGTGCAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACATCTCTTAGAGGCAGGTaGGTGTTAGGTCCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: SDRWCRVGEMRSYVGMDTSLRGR*VLGPRA
Trigger: AGCCCTAGGACCTAACACCCACCTGCCTCTAAGAGA...TGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCACAATCTCCCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCGCCTGTTTCAGAAATaGGAGATTCTACAGCACGCT +
Preference number: 4 (lower is better)
Translates to: SQSPSPERATQTPEQVTNRLFQK*EILQHA
Trigger: AGCGTGCTGTAGAATCTCCCATTTCTGAAACAGGCG...GTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGGGAGATTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATTCTCTGAATCAAGTCAACTCCTCCTCCTaGGTTCCTTGGATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRHQNKSPTHQGFNSLNQVNSSS*VPWMAG
Trigger: GCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGAC...TTGATTCAGAGAATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTGTCCTCATGCAGGGGTaGAGATGTGCAGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: CNDKRKVQLVARLAVFSPVLMQG*RCAEHP
Trigger: AGGGTGCTCTGCACATCTTCACCCCTGCATGAGGAC...AGGTGAGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCGGTATTTGGAGGGCATaGTCACCAGGAAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCGIWRA*SPGSAA
Trigger: GGCAGCGCTTCCTGGTGAGCATGCCCTCCAAATACC...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CAGAATCATCTTCTGAGCTGGACTCCTCTCCTGATAACTGTGGCTCAGCTGGGAAGCGCACGTGGTCCTTaGAGAGCACAAACGAGATTT +
Preference number: 4 (lower is better)
Translates to: QNHLLSWTPLLITVAQLGSARGP*RAQTRF
Trigger: AAATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCT...TCCCAGCTGAGCCACAGTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR GCA 90 bp CTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATTCTCTGAATCAACCTGGAGTCTCAGGCTaGCTCCTCCTCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: LRHQNKSPTHQGFNSLNQPGVSG*LLLFTL
Trigger: GAGAGTGAAGAGGAGGAGGCAGCCTGAGACTCCAGG...TTGATTCAGAGAATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTCTGGCACTTTCTAAGTaGCCAATAAGAAAGAACAAA +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSLALSK*PIRKNK
Trigger: TTTGTTCTTTCTTATTGGGCACTTAGAAAGTGCCAG...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTATTCCCTCTGATGGTTaGTGTTTCTTAATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SPERATQTPEQVTNPPGVIPSDG*CFLMRH
Trigger: ATGCCTCATTAAGAAACAGCAACCATCAGAGGGAAT...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGAATTCCCTCTGATGGTTaGTGTTTCTTAATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: EVSTPVHRVTRKAGRTARIPSDG*CFLMRH
Trigger: ATGCCTCATTAAGAAACAGCAACCATCAGAGGGAAT...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGTGTTCTTGCGGTATTTaGAGGGCATGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: RQRGVGWTTELMLHKREVCSCGI*RACSPG
Trigger: TCCTGGTGAGCATGCCCTCCAAATACCGCAAGAACA...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCATGCAGAGAGCGCACGTaGTCCTTGCAGAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKACRERT*SLQSTN
Trigger: GTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCA...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCAATCATCTTCTGAGCTaGACTCCTCTCCTGATAACT +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTNHLLS*TPLLIT
Trigger: AGTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATT...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCATGGAGAATTGGGTCCTaGAGTCTCAGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKAWRIGS*SLRLPP
Trigger: AGGAGGCAGCCTGAGACTCCAGGACCCAATTCTCCA...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATCGCCTGTTTCAGAAATaGGAGATTCTACAGCACGCT +
Preference number: 4 (lower is better)
Translates to: PREPLRHQNKSPTHQGFNRLFQK*EILQHA
Trigger: AGCGTGCTGTAGAATCTCCCATTTCTGAAACAGGCG...ATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGGGTAGCTGGAGGACGTaGGAATCAGTACAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: RQRGVGWTTELMLHKREVGSWRT*ESVQVF
Trigger: GAAAACCTGTACTGATTCCCACGTCCTCCAGCTACC...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp GTGTTAACAAACAGGTCAGAATCATCTTCTGAGCTGGACTCCTCTCCTGATAACGTCAACTCCTCCTCCTaGGTTCCTTGGATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VLTNRSESSSELDSSPDNVNSSS*VPWMAG
Trigger: GCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGAC...GTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATTCTGACCTGTTTGTTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR TCA 90 bp TGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAAGGCAGAAGGGCTGGGAGTTCTGGTTaGGTTTGTCTGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: CRVDYGIDATQEGSEGRRAGSSG*VCLFLL
Trigger: CAACAGGAACAGACAAACTCAACCAGAACTCCCAGC...CCTTCTGCCTTCACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCACACAGTAGCTGGAGGTaGGCACTCCCGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: MGDSTARSTLTHHIHNISHSSWR*ALPYTG
Trigger: CCCTGTGTACGGGAGTGCTCACCTCCAGCTACTGTG...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGAATAAGACAGAAGTTTTaGAACAGACATCCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: EVSTPVHRVTRKAGRTARIRQKF*NRHPRV
Trigger: TACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTAT...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTCCAACTGCGAGGAGTaGGACGTGAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCSNCEE*DVSLSL
Trigger: CAGACTCAGACTCACGTCGCACTCCTCGCAGTTGGA...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTACCCTGACAATCTGCTaGTGGTCGGAGGGCACTATG +
Preference number: 4 (lower is better)
Translates to: CNDKRKVQLVARLAVFSPTLTIC*WSEGTM
Trigger: CATAGTGCCCTCCGACCAGCAGCAGATTGTCAGGGT...AGGTGAGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTAGTACCCTGACAATCTaGTGCTGGTCGGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: CNDKRKVQLVARLAVFSPSTLTI*CWSEGT
Trigger: AGTGCCCTCCGACCAGCAGCAGATTGTCAGGGTACT...AGGTGAGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGCTCACCAGGAAGCGCTaGCCTTGGGCTGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPLTRKR*PWAVST
Trigger: GGTGGAGACAGCCCAAGGGCAGCGCTTCCTGGTGAG...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAAGGCAGAAGGAGCGCACGTGGTCCTTaGAGAGCACAAACGAGATTT +
Preference number: 4 (lower is better)
Translates to: CRVDYGIDATQEGSEGRRSARGP*RAQTRF
Trigger: AAATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCT...CCTTCTGCCTTCACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TGTCATCCTGAATGCTTAAATTGGTATGAACTGCAAGCAGGCAAGGAAGCAGGACAAAACCCCTCCTTCTaGAGAGAGCGCACGTGGTCC +
Preference number: 4 (lower is better)
Translates to: CHPECLNWYELQAGKEAGQNPSF*RERTWS
Trigger: GGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTG...TCCTGCTTCCTTGCCTGCTTGCAGTTCATACCAATTTAAGCATTCAGGATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATAAGGATAGAGAGATTTaGCAGCCACCTTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PREPLRHQNKSPTHQGFNKDREI*QPPSGS
Trigger: ACTTCCAGAAGGTGGCTGGCAAATCTCTCTATCCTT...ATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAGATATGTGCACATCTaGAGAGCTGGTAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: RQRGVGWTTELMLHKREVRYVHI*RAGNRE
Trigger: CTCCCTGTTACCAGCTCTGCAGATGTGCACATATCT...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTTGCAGAGAGCGCACGTaGTCCTTGCAGAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: CNDKRKVQLVARLAVFSPCRERT*SLQSTN
Trigger: GTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCA...AGGTGAGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CTCCTCCTCACTCTCATGATACTGTCTGCGGTTTGTGTTAACAAACAGGTCAGATGCAGAGAGCGCACGTaGTCCTTGCAGAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: LLLTLMILSAVCVNKQVRCRERT*SLQSTN
Trigger: GTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCA...TCTGACCTGTTTGTTAACACAAACCGCAGACAGTATCATGAGAGTGAGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR CCA 90 bp CTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATTCTCTGAATCAATGGAGAATTGGGTCCTaGAGTCTCAGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LRHQNKSPTHQGFNSLNQWRIGS*SLRLPP
Trigger: AGGAGGCAGCCTGAGACTCCAGGACCCAATTCTCCA...TTGATTCAGAGAATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp AGGTTTGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCAGCACGAGGCACCATaGGCTCCTGAGCGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: RFVMINVRYNWWPGWLFSQHEAP*APERLL
Trigger: TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTG...AGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTAATAAAGTCAGGAGATaGATGGACCATTCAAAACAA +
Preference number: 4 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSNKVRR*MDHSKQ
Trigger: TTGTTTTGAATGGTCCATCCATCTCCTGACTTTATT...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR CAA 72 bp CTGGCTGTTTTCTCACCTAATGATGGTGACTTGGGTTaGGGCACAGAGGTGAATGATTGGGTTTACCCAGGG +
Preference number: 4 (lower is better)
Translates to: LAVFSPNDGDLG*GTEVNDWVYPG
Trigger: CCCTGGGTAAACCCAATCATTCACCTCTGTGCCCAAACCCAAGTCACCATCATTAGGTGAGAAAACAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
3UTR CAA 72 bp GCCAGGCTGGCTGTTTTCTCACCTAATGATGGTGACTaGGGTTTGGGCACAGAGGTGAATGATTGGGTTTAC +
Preference number: 4 (lower is better)
Translates to: ARLAVFSPNDGD*GLGTEVNDWVY
Trigger: GTAAACCCAATCATTCACCTCTGTGCCCAAACCCAAGTCACCATCATTAGGTGAGAAAACAGCCAGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp AGGTTTGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTTGGCCTGAGACATGCTaGAGTCGTCCCACACTGGTT +
Preference number: 4 (lower is better)
Translates to: RFVMINVRYNWWPGWLFSWPETC*SRPTLV
Trigger: AACCAGTGTGGGACGACTTCAGCATGTCTCAGGCCA...AGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGCCAGGGGCCAGTCCCTaGGCAAGTGGAGAATTGGGT +
Preference number: 4 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPPGASP*ASGELG
Trigger: ACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGG...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAAGGCAGAAGGGCAGAAGGTTACTCATaGGAATGTCAGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: CRVDYGIDATQEGSEGRRAEGYS*ECQGWL
Trigger: TAACCAGCCCTGACATTCTCATGAGTAACCTTCTGC...CCTTCTGCCTTCACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAAGGCAGAAGGGGCAGGCATTCCCTCTaGTGGTTGCTGTTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: CRVDYGIDATQEGSEGRRGRHSL*WLLFLN
Trigger: ATTAAGAAACAGCAACCATCAGAGGGAATGCCTGCC...CCTTCTGCCTTCACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCATCCCACCAGTCCAACTaGGAGGAGTGCGACGTGAGT +
Preference number: 4 (lower is better)
Translates to: MGDSTARSTLTHHIHNISSHQSN*EECDVS
Trigger: ACTCACGTCGCACTCCTCGCAGTTGGACTGGTGGGA...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp AGGTTTGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTGCTGTCTCCACCTCATaGAGATTGTTCCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RFVMINVRYNWWPGWLFSAVSTS*RLFPGV
Trigger: GACCCCAGGGAACAATCTGCATGAGGTGGAGACAGC...AGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCACCTGGAGTCTCAGGCTaGCTCCTCCTCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: MGDSTARSTLTHHIHNISPGVSG*LLLFTL
Trigger: GAGAGTGAAGAGGAGGAGGCAGCCTGAGACTCCAGG...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATTCTCTGAATCAACCTGCTTTGTCCTCATaGAGGGGTGAAGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: LRHQNKSPTHQGFNSLNQPALSS*RGEDVQ
Trigger: CTGCACATCTTCACCCCTGCATGAGGACAAAGCAGG...TTGATTCAGAGAATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp TGTCATCCTGAATGCTTAAATTGGTATGAACTGCAAGCAGGCAAGGAAGCAGGATTCAGAGAGGAGCCCTaGTTTGTCCTCATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CHPECLNWYELQAGKEAGFREEP*FVLMQG
Trigger: CCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGAA...TCCTGCTTCCTTGCCTGCTTGCAGTTCATACCAATTTAAGCATTCAGGATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCAGAAGTCGTCCCACACTaGTTAGGAACGAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKAEVVPH*LGTKRL
Trigger: CAGTCTCTTCGTTCCTAACCAGTGTGGGACGACTTC...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTATGCAGATTGTTCCCTaGGGTCCTGAGTACCCTGAC +
Preference number: 4 (lower is better)
Translates to: CNDKRKVQLVARLAVFSPMQIVP*GPEYPD
Trigger: GTCAGGGTACTCAGGACCCCAGGGAACAATCTGCAT...AGGTGAGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCATGCAGATTGTTCCCTaGGGTCCTGAGTACCCTGAC +
Preference number: 4 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCMQIVP*GPEYPD
Trigger: GTCAGGGTACTCAGGACCCCAGGGAACAATCTGCAT...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TGTCATCCTGAATGCTTAAATTGGTATGAACTGCAAGCAGGCAAGGAAGCAGGATGGAGAATTGGGTCCTaGAGTCTCAGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CHPECLNWYELQAGKEAGWRIGS*SLRLPP
Trigger: AGGAGGCAGCCTGAGACTCCAGGACCCAATTCTCCA...TCCTGCTTCCTTGCCTGCTTGCAGTTCATACCAATTTAAGCATTCAGGATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCGAGCAAGTGGAGAATTaGGTCCTGGAGTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCEQVEN*VLESQA
Trigger: AGCCTGAGACTCCAGGACCCAATTCTCCACTTGCTC...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTCTCTTAGAGGCAGGTaGGTGTTAGGTCCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCSLRGR*VLGPRA
Trigger: AGCCCTAGGACCTAACACCCACCTGCCTCTAAGAGA...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATTCTCTGAATCAAACTAGCGGAACAGAATaGAGGGAGACAGAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LRHQNKSPTHQGFNSLNQTSGTE*RETEGC
Trigger: ACACCCCTCTGTCTCCCTCCATTCTGTTCCGCTAGT...TTGATTCAGAGAATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TCACAATCTCCCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACAGGTTTAAGTCCCATTaGCTTACGACAGGAAGATAT +
Preference number: 4 (lower is better)
Translates to: SQSPSPERATQTPEQVTNRFKSH*LTTGRY
Trigger: ATATCTTCCTGTCGTAAGCCAATGGGACTTAAACCT...GTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGGGAGATTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTCCTCCTCACTCTCATaGTACTGTCTGCGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCSSSLS*YCLRFV
Trigger: CACAAACCGCAGACAGTATCATGAGAGTGAGGAGGA...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTTCCTCCTCACTCTCATaGTACTGTCTGCGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: CNDKRKVQLVARLAVFSPSSSLS*YCLRFV
Trigger: CACAAACCGCAGACAGTATCATGAGAGTGAGGAGGA...AGGTGAGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGGTCCTCATGCAGGGGTaGAGATGTGCAGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPVLMQG*RCAEHP
Trigger: AGGGTGCTCTGCACATCTTCACCCCTGCATGAGGAC...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGATGCTTAAATTGGTATaGACTGCAAGCAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RQRGVGWTTELMLHKREVMLKLV*TASRQG
Trigger: TCCTTGCCTGCTTGCAGTTCATACCAATTTAAGCAT...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CTCTTCACTCTCCTCCTCACTCTCATGATACTGTCTGCGGTTTGTGTTAACAAACAATGGGGTCAACAATaGGAAAGTCCCCAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: LFTLLLTLMILSAVCVNKQWGQQ*ESPQEA
Trigger: CGCTTCCTGGGGACTTTCTCATTGTTGACCCCATTG...TTTGTTAACACAAACCGCAGACAGTATCATGAGAGTGAGGAGGAGAGTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR GCA 90 bp CTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATTCTCTGAATCAAAGCGCACGTGGTCCTTaGAGAGCACAAACGAGATTT +
Preference number: 4 (lower is better)
Translates to: LRHQNKSPTHQGFNSLNQSARGP*RAQTRF
Trigger: AAATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCT...TTGATTCAGAGAATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATTCTCTGAATCAATGTTCTTGCGGTATTTaGAGGGCATGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LRHQNKSPTHQGFNSLNQCSCGI*RACSPG
Trigger: TCCTGGTGAGCATGCCCTCCAAATACCGCAAGAACA...TTGATTCAGAGAATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CAGAATCATCTTCTGAGCTGGACTCCTCTCCTGATAACTGTGGCTCAGCTGGGAAATCATCTTCTGAGCTaGACTCCTCTCCTGATAACT +
Preference number: 4 (lower is better)
Translates to: QNHLLSWTPLLITVAQLGNHLLS*TPLLIT
Trigger: AGTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATT...TCCCAGCTGAGCCACAGTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR CCA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCAATAAAGTCAGGAGATaGATGGACCATTCAAAACAA +
Preference number: 4 (lower is better)
Translates to: SERSPALSSCRGEDVQSTNKVRR*MDHSKQ
Trigger: TTGTTTTGAATGGTCCATCCATCTCCTGACTTTATT...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTCAGAGGGGTGTAGGGTaGACTACGGAATTGATGCTA +
Preference number: 4 (lower is better)
Translates to: CNDKRKVQLVARLAVFSPQRGVG*TTELML
Trigger: TAGCATCAATTCCGTAGTCCACCCTACACCCCTCTG...AGGTGAGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp GTGTTAACAAACAGGTCAGAATCATCTTCTGAGCTGGACTCCTCTCCTGATAACGCTGGGAGTTCTGGTTaGGTTTGTCTGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: VLTNRSESSSELDSSPDNAGSSG*VCLFLL
Trigger: CAACAGGAACAGACAAACTCAACCAGAACTCCCAGC...GTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATTCTGACCTGTTTGTTAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR GCA 90 bp AGGTTTGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTGCAAGGAAGCAGGAGTaGTCCCAGCTGTTAAACACA +
Preference number: 4 (lower is better)
Translates to: RFVMINVRYNWWPGWLFSARKQE*SQLLNT
Trigger: TGTGTTTAACAGCTGGGAGCACTCCTGCTTCCTTGC...AGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp AGTGATAGATGGTGCAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACAGGCTGTCATCCTGAATaGTTAAATTGGTATGAACTG +
Preference number: 4 (lower is better)
Translates to: SDRWCRVGEMRSYVGMDTGCHPE*LNWYEL
Trigger: CAGTTCATACCAATTTAAGCATTCAGGATGACAGCC...TGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGGGCTGTCATCCTGAATaGTTAAATTGGTATGAACTG +
Preference number: 4 (lower is better)
Translates to: RQRGVGWTTELMLHKREVGCHPE*LNWYEL
Trigger: CAGTTCATACCAATTTAAGCATTCAGGATGACAGCC...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCAAAGGATAGAGAGATTTaGCAGCCACCTTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKAKDREI*QPPSGS
Trigger: ACTTCCAGAAGGTGGCTGGCAAATCTCTCTATCCTT...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCCGACAGGAAGATATGTaGACATCTGCAGAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCRQEDM*TSAELV
Trigger: TACCAGCTCTGCAGATGTGCACATATCTTCCTGTCG...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CTCTTCACTCTCCTCCTCACTCTCATGATACTGTCTGCGGTTTGTGTTAACAAAGAAGTCGTCCCACACTaGTTAGGAACGAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: LFTLLLTLMILSAVCVNKEVVPH*LGTKRL
Trigger: CAGTCTCTTCGTTCCTAACCAGTGTGGGACGACTTC...TTTGTTAACACAAACCGCAGACAGTATCATGAGAGTGAGGAGGAGAGTGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR CCA 90 bp CCACCCACAAGGTCTCTAATAAATAGGGAGCAGTTTTTCACTTCATCACAATCTTGCAGAGAGCGCACGTaGTCCTTGCAGAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: PPTRSLINREQFFTSSQSCRERT*SLQSTN
Trigger: GTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCA...AGATTGTGATGAAGTGAAAAACTGCTCCCTATTTATTAGAGACCTTGTGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCACAGTCCCTGAGCAAGTaGAGAATTGGGTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: MGDSTARSTLTHHIHNISQSLSK*RIGSWS
Trigger: ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTG...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCAGGCTGGTTAGAAGAATaGAGGGTGAGGGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: MGDSTARSTLTHHIHNISGWLEE*RVRVEK
Trigger: CTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCC...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTACACAAGAGGGAAGTaGAGGCAGAAGGTTACTCAT +
Preference number: 4 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCYTRGK*RQKVTH
Trigger: ATGAGTAACCTTCTGCCTTCACTTCCCTCTTGTGTA...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCAAGCGCACGTGGTCCTTaGAGAGCACAAACGAGATTT +
Preference number: 4 (lower is better)
Translates to: MGDSTARSTLTHHIHNISSARGP*RAQTRF
Trigger: AAATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCT...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCACAGCTGTTAAACACATaGAAGAAGGCCCAGAGCACG +
Preference number: 4 (lower is better)
Translates to: MGDSTARSTLTHHIHNISQLLNT*KKAQST
Trigger: CGTGCTCTGGGCCTTCTTGCATGTGTTTAACAGCTG...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCAGCAAGGAAGCAGGAGTaGTCCCAGCTGTTAAACACA +
Preference number: 4 (lower is better)
Translates to: MGDSTARSTLTHHIHNISARKQE*SQLLNT
Trigger: TGTGTTTAACAGCTGGGAGCACTCCTGCTTCCTTGC...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCAGAAGTCGTCCCACACTaGTTAGGAACGAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: MGDSTARSTLTHHIHNISEVVPH*LGTKRL
Trigger: CAGTCTCTTCGTTCCTAACCAGTGTGGGACGACTTC...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCATGTTCTTGCGGTATTTaGAGGGCATGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: MGDSTARSTLTHHIHNISCSCGI*RACSPG
Trigger: TCCTGGTGAGCATGCCCTCCAAATACCGCAAGAACA...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGGCTGGGAGTTCTGGTTaGGTTTGTCTGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPAGSSG*VCLFLL
Trigger: CAACAGGAACAGACAAACTCAACCAGAACTCCCAGC...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp AGGTTTGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTTACACAAGAGGGAAGTaGAGGCAGAAGGTTACTCAT +
Preference number: 4 (lower is better)
Translates to: RFVMINVRYNWWPGWLFSYTRGK*RQKVTH
Trigger: ATGAGTAACCTTCTGCCTTCACTTCCCTCTTGTGTA...AGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp GTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTTAGTGTCCATCGGCTGTCATCCTGAATaGTTAAATTGGTATGAACTG +
Preference number: 4 (lower is better)
Translates to: VLKQTSQSRSAGQCLVSIGCHPE*LNWYEL
Trigger: CAGTTCATACCAATTTAAGCATTCAGGATGACAGCC...GATGGACACTAAGCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCAATTCCCTCTGATGGTTaGTGTTTCTTAATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKAIPSDG*CFLMRH
Trigger: ATGCCTCATTAAGAAACAGCAACCATCAGAGGGAAT...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGGAAGTCGTCCCACACTaGTTAGGAACGAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPEVVPH*LGTKRL
Trigger: CAGTCTCTTCGTTCCTAACCAGTGTGGGACGACTTC...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCAAAGAACAAACCACCTaGGAAAGACTCCAGCCATTT +
Preference number: 4 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCKEQTT*ERLQPF
Trigger: AAATGGCTGGAGTCTTTCCCAGGTGGTTTGTTCTTT...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp TGTCATCCTGAATGCTTAAATTGGTATGAACTGCAAGCAGGCAAGGAAGCAGGAATGCTTAAATTGGTATaGACTGCAAGCAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: CHPECLNWYELQAGKEAGMLKLV*TASRQG
Trigger: TCCTTGCCTGCTTGCAGTTCATACCAATTTAAGCAT...TCCTGCTTCCTTGCCTGCTTGCAGTTCATACCAATTTAAGCATTCAGGATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp CCACCCACAAGGTCTCTAATAAATAGGGAGCAGTTTTTCACTTCATCACAATCTGGCAGGCATTCCCTCTaGTGGTTGCTGTTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: PPTRSLINREQFFTSSQSGRHSL*WLLFLN
Trigger: ATTAAGAAACAGCAACCATCAGAGGGAATGCCTGCC...AGATTGTGATGAAGTGAAAAACTGCTCCCTATTTATTAGAGACCTTGTGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR GCA 90 bp CCACCCACAAGGTCTCTAATAAATAGGGAGCAGTTTTTCACTTCATCACAATCTAGATATGTGCACATCTaGAGAGCTGGTAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: PPTRSLINREQFFTSSQSRYVHI*RAGNRE
Trigger: CTCCCTGTTACCAGCTCTGCAGATGTGCACATATCT...AGATTGTGATGAAGTGAAAAACTGCTCCCTATTTATTAGAGACCTTGTGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp AGGTTTGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTAATCATCTTCTGAGCTaGACTCCTCTCCTGATAACT +
Preference number: 4 (lower is better)
Translates to: RFVMINVRYNWWPGWLFSNHLLS*TPLLIT
Trigger: AGTTATCAGGAGAGGAGTCCAGCTCAGAAGATGATT...AGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCAGGTTTAAGTCCCATTaGCTTACGACAGGAAGATAT +
Preference number: 4 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCRFKSH*LTTGRY
Trigger: ATATCTTCCTGTCGTAAGCCAATGGGACTTAAACCT...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp TGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTAGGTTTAAGTCCCATTaGCTTACGACAGGAAGATAT +
Preference number: 4 (lower is better)
Translates to: CNDKRKVQLVARLAVFSPRFKSH*LTTGRY
Trigger: ATATCTTCCTGTCGTAAGCCAATGGGACTTAAACCT...AGGTGAGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGATGCTTAAATTGGTATaGACTGCAAGCAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPMLKLV*TASRQG
Trigger: TCCTTGCCTGCTTGCAGTTCATACCAATTTAAGCAT...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGAAAGAACAAACCACCTaGGAAAGACTCCAGCCATTT +
Preference number: 4 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPKEQTT*ERLQPF
Trigger: AAATGGCTGGAGTCTTTCCCAGGTGGTTTGTTCTTT...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGCCTGAATGCTTAAATTaGTATGAACTGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPPECLN*YELQAG
Trigger: GCCTGCTTGCAGTTCATACCAATTTAAGCATTCAGG...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCACCCACAAGGTCTCTAATAAATAGGGAGCAGTTTTTCACTTCATCACAATCTCCTGAATGCTTAAATTaGTATGAACTGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PPTRSLINREQFFTSSQSPECLN*YELQAG
Trigger: GCCTGCTTGCAGTTCATACCAATTTAAGCATTCAGG...AGATTGTGATGAAGTGAAAAACTGCTCCCTATTTATTAGAGACCTTGTGGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR TCA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGATAAGACAGAAGTTTTaGAACAGACATCCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPIRQKF*NRHPRV
Trigger: TACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTAT...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CCA 90 bp CCACCCACAAGGTCTCTAATAAATAGGGAGCAGTTTTTCACTTCATCACAATCTAATAAAGTCAGGAGATaGATGGACCATTCAAAACAA +
Preference number: 4 (lower is better)
Translates to: PPTRSLINREQFFTSSQSNKVRR*MDHSKQ
Trigger: TTGTTTTGAATGGTCCATCCATCTCCTGACTTTATT...AGATTGTGATGAAGTGAAAAACTGCTCCCTATTTATTAGAGACCTTGTGGGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS CCA 90 bp CCTCGGCTCCCAGGAACGCTGCCGGAGCAACACCGCCGTCTAGGCTaGACGCTGAGAGAGGATCGTCCACGACTCACTTCAAGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: PRLPGTLPEQHRRLG*TLREDRPRLTSRLN
Trigger: GTTCAGCCTTGAAGTGAGTCGTGGACGATCCTCTCTCAGCGTCCAGCCTAGACGGCGGTGTTGCTCCGGCAGCGTTCCTGGGAGCCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000527249.5
ENST00000532707.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CCTCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGGAGCGCACGTGGTCCTaGCAGAGCACAAACGAGATT +
Preference number: 5 (lower is better)
Translates to: PPPREPLRHQNKSPTHQGERTWS*QSTNEI
Trigger: AATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCTC...CCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS CCA 90 bp TTAGGAACGAAGAGACTGTCAACTCCTCCTCCTGAGTTCCTTGGATaGCAGGCTCAGAACCCAGGACTGTTCGGCGGCCGCGACGGTAGC +
Preference number: 5 (lower is better)
Translates to: LGTKRLSTPPPEFLG*QAQNPGLFGGRDGS
Trigger: GCTACCGTCGCGGCCGCCGAACAGTCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGACAGTCTCTTCGTTCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526449.1
ENST00000526451.5
CDS-3UTR CAA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTGAGCGCACGTGGTCCTaGCAGAGCACAAACGAGATT +
Preference number: 5 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSERTWS*QSTNEI
Trigger: AATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCTC...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS TCA 90 bp CGTCCCACACTGGTTAGGAACGAAGAGACTGTCAACTCCTCCTCCTaGGTTCCTTGGATGGCAGGCTCAGAACCCAGGACTGTTCGGCGG +
Preference number: 5 (lower is better)
Translates to: RPTLVRNEETVNSSS*VPWMAGSEPRTVRR
Trigger: CCGCCGAACAGTCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGACAGTCTCTTCGTTCCTAACCAGTGTGGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526449.1
ENST00000526451.5
CDS GCA 90 bp CAGATGTTCTTGCGGTATTTGGAGGGCATGCTCACCAGGAAGCGCTaGCCTTGGGCTGTCTCCACCTCATGCAGATTGTTCCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: QMFLRYLEGMLTRKR*PWAVSTSCRLFPGV
Trigger: GACCCCAGGGAACAATCTGCATGAGGTGGAGACAGCCCAAGGGCAGCGCTTCCTGGTGAGCATGCCCTCCAAATACCGCAAGAACATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526449.1
ENST00000526451.5
ENST00000527051.1
ENST00000527249.5
ENST00000529964.5
ENST00000530462.5
ENST00000532707.5
ENST00000533544.6
CDS GCA 90 bp CAGGTCTCCAGTGTTCCCAGTTCCCACCAGTCCAACTGCGAGGAGTaGGACGTGAGTCTGAGTCTGATCCCTCCGAAAACCGTACTTCCG +
Preference number: 5 (lower is better)
Translates to: QVSSVPSSHQSNCEE*DVSLSLIPPKTVLP
Trigger: CGGAAGTACGGTTTTCGGAGGGATCAGACTCAGACTCACGTCGCACTCCTCGCAGTTGGACTGGTGGGAACTGGGAACACTGGAGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525767.5
ENST00000527249.5
ENST00000529964.5
CDS-3UTR CAA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCCTCCTCCTGAGTTCCTaGGATGGCAGGCTCAGAACC +
Preference number: 5 (lower is better)
Translates to: SERSPALSSCRGEDVQSTLLLSS*DGRLRT
Trigger: GGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAG...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CTAGAAAGGCGGGGAGAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAGAGCGCACGTGGTCCTaGCAGAGCACAAACGAGATT +
Preference number: 5 (lower is better)
Translates to: LERRGEQHEAPWAPERLLERTWS*QSTNEI
Trigger: AATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCTC...TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTCTCCCCGCCTTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp GAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAGAGGCAGGTGGGTGTCCTAATGATGGTGACTaGGGTTTGGGCACAGAGGTG +
Preference number: 5 (lower is better)
Translates to: EQHEAPWAPERLLEAGGCPNDGD*GLGTEV
Trigger: CACCTCTGTGCCCAAACCCAAGTCACCATCATTAGG...ACACCCACCTGCCTCTAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp TCCTTCTGCAGAGAGCGCACGTGGTCCTTGCAGAGCACAAACGAGATTTCAGCCCTCCTCCTGAGTTCCTaGGATGGCAGGCTCAGAACC +
Preference number: 5 (lower is better)
Translates to: SFCRERTWSLQSTNEISALLLSS*DGRLRT
Trigger: GGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAG...GGCTGAAATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCAGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR CAA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTATGTTCTTGCGGTATTaGGAGGGCATGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: SPERATQTPEQVTNPPGVMFLRY*EGMLTR
Trigger: CCTGGTGAGCATGCCCTCCAAATACCGCAAGAACAT...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCGAGCGCACGTGGTCCTaGCAGAGCACAAACGAGATT +
Preference number: 5 (lower is better)
Translates to: SERSPALSSCRGEDVQSTERTWS*QSTNEI
Trigger: AATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCTC...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CAA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGACCTAATGATGGTGACTaGGGTTTGGGCACAGAGGTG +
Preference number: 5 (lower is better)
Translates to: EVSTPVHRVTRKAGRTARPNDGD*GLGTEV
Trigger: CACCTCTGTGCCCAAACCCAAGTCACCATCATTAGG...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTAGGCAGGAGAGTTACTaGAACCCAGTAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSRQESY*NPVGEG
Trigger: ACCTTCACCTACTGGGTTCAAGTAACTCTCCTGCCT...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATCTCCTCCTGAGTTCCTaGGATGGCAGGCTCAGAACC +
Preference number: 5 (lower is better)
Translates to: PREPLRHQNKSPTHQGFNLLLSS*DGRLRT
Trigger: GGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAG...ATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCATGTTCTTGCGGTATTaGGAGGGCATGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: SERSPALSSCRGEDVQSTMFLRY*EGMLTR
Trigger: CCTGGTGAGCATGCCCTCCAAATACCGCAAGAACAT...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTAGCTGGGAGTTCTGGTaGAGTTTGTCTGTTCCTGTT +
Preference number: 5 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSSWEFW*SLSVPV
Trigger: AACAGGAACAGACAAACTCAACCAGAACTCCCAGCT...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CTAGAAAGGCGGGGAGAACAGCACGAGGCACCATGGGCTCCTGAGCGTCTCTTAGATGGTGACTTGGGTTaGGGCACAGAGGTGAATGAT +
Preference number: 5 (lower is better)
Translates to: LERRGEQHEAPWAPERLLDGDLG*GTEVND
Trigger: ATCATTCACCTCTGTGCCCAAACCCAAGTCACCATC...TAAGAGACGCTCAGGAGCCCATGGTGCCTCGTGCTGTTCTCCCCGCCTTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp GAGGTGAGCACTCCCGTACACAGGGTGACTAGAAAGGCGGGGAGAACAGCACGAGATGGTGACTTGGGTTaGGGCACAGAGGTGAATGAT +
Preference number: 5 (lower is better)
Translates to: EVSTPVHRVTRKAGRTARDGDLG*GTEVND
Trigger: ATCATTCACCTCTGTGCCCAAACCCAAGTCACCATC...TCGTGCTGTTCTCCCCGCCTTTCTAGTCACCCTGTGTACGGGAGTGCTCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCCCTAATGATGGTGACTaGGGTTTGGGCACAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SERSPALSSCRGEDVQSTPNDGD*GLGTEV
Trigger: CACCTCTGTGCCCAAACCCAAGTCACCATCATTAGG...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTAGGCAGGAGAGTTACTaGAACCCAGTAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: SPERATQTPEQVTNPPGVRQESY*NPVGEG
Trigger: ACCTTCACCTACTGGGTTCAAGTAACTCTCCTGCCT...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS TCA 90 bp GCACCTCCTTCACCACATGCTTCCTCTTGGTGGCCTGAGACATGCTaGAGTCGTCCCACACTGGTTAGGAACGAAGAGACTGTCAACTCC +
Preference number: 5 (lower is better)
Translates to: APPSPHASSWWPETC*SRPTLVRNEETVNS
Trigger: GGAGTTGACAGTCTCTTCGTTCCTAACCAGTGTGGGACGACTTCAGCATGTCTCAGGCCACCAAGAGGAAGCATGTGGTGAAGGAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312234.6
ENST00000526449.1
ENST00000526451.5
ENST00000527051.1
ENST00000527249.5
ENST00000529973.1
ENST00000530462.5
ENST00000533544.6
CDS TCA 90 bp CGTCCCACACTGGTTAGGAACGAAGAGACTGTCAACTCCTCCTCCTaGGTTCCTTGGATGGCAGGCTCAGAACCCAGGACTGTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: RPTLVRNEETVNSSS*VPWMAGSEPRTVLK
Trigger: CTTCAGAACAGTCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGACAGTCTCTTCGTTCCTAACCAGTGTGGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527051.1
ENST00000530462.5
ENST00000533544.6
CDS GCA 90 bp GTTAGAAATCAGGTCTCCAGTGTTCCCAGTTCCCACCAGTCCAACTaGGAGGAGTGCGACGTGAGTCTGAGTCTGATCCCTCCGAAAACC +
Preference number: 5 (lower is better)
Translates to: VRNQVSSVPSSHQSN*EECDVSLSLIPPKT
Trigger: GGTTTTCGGAGGGATCAGACTCAGACTCACGTCGCACTCCTCGCAGTTGGACTGGTGGGAACTGGGAACACTGGAGACCTGATTTCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526449.1
ENST00000526451.5
ENST00000527249.5
ENST00000529964.5
ENST00000530462.5
ENST00000533544.6
CDS-3UTR CAA 90 bp TCCCCCGAGAGAGCCACTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTTGATCCAGATGTTCTaGCGGTATTTGGAGGGCATG +
Preference number: 5 (lower is better)
Translates to: SPERATQTPEQVTNPPGVLIQMF*RYLEGM
Trigger: CATGCCCTCCAAATACCGCAAGAACATCTGGATCAA...AACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAGTGGCTCTCTCGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CCCAGAAGAGCCAGGGGCCAGTCCCTGAGCAAGTGGAGAATTGGGTCCTGGAGTGAGTTCTGGTTGAGTTaGTCTGTTCCTGTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: PRRARGQSLSKWRIGSWSEFWLS*SVPVVV
Trigger: CACAACAACAGGAACAGACAAACTCAACCAGAACTC...ACTCCAGGACCCAATTCTCCACTTGCTCAGGGACTGGCCCCTGGCTCTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CTCAGGCCAAAACCCCTCCTTCTGCAGAGAGCGCACGTGGTCCTTGCAGAGCACGAGTTCTGGTTGAGTTaGTCTGTTCCTGTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: LRPKPLLLQRAHVVLAEHEFWLS*SVPVVV
Trigger: CACAACAACAGGAACAGACAAACTCAACCAGAACTC...GTGCTCTGCAAGGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTGGCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS TCA 90 bp CGTCCCACACTGGTTAGGAACGAAGAGACTGTCAACTCCTCCTCCTaGGTTCCTTGGATGGCAGGCTCAGAACCCAGGAACTTAGTCTCT +
Preference number: 5 (lower is better)
Translates to: RPTLVRNEETVNSSS*VPWMAGSEPRNLVS
Trigger: AGAGACTAAGTTCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGACAGTCTCTTCGTTCCTAACCAGTGTGGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312234.6
CDS GCA 90 bp GCCCAGGCTGGTCTCAAGCGATCCTCCCATCTCAGCCTCTCAAAGTaGCAGGATTACAGGAGTAATCCTCTCACCTCTCTTGATCCAGAT +
Preference number: 5 (lower is better)
Translates to: AQAGLKRSSHLSLSK*QDYRSNPLTSLDPD
Trigger: ATCTGGATCAAGAGAGGTGAGAGGATTACTCCTGTAATCCTGGCACTTTGAGAGGCTGAGATGGGAGGATCGCTTGAGACCAGCCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526449.1
CDS CCA 90 bp TTAGGAACGAAGAGACTGTCAACTCCTCCTCCTGAGTTCCTTGGATaGCAGGCTCAGAACCCAGGACTGTTACTTAGTCTCTGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: LGTKRLSTPPPEFLG*QAQNPGLLLSLWPS
Trigger: CGAGGGCCAGAGACTAAGTAACAGTCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGACAGTCTCTTCGTTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527249.5
CDS-3UTR CAA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCTTGATCCAGATGTTCTaGCGGTATTTGGAGGGCATG +
Preference number: 5 (lower is better)
Translates to: SERSPALSSCRGEDVQSTLIQMF*RYLEGM
Trigger: CATGCCCTCCAAATACCGCAAGAACATCTGGATCAA...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CAA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGGAGCGCACGTGGTCCTaGCAGAGCACAAACGAGATT +
Preference number: 5 (lower is better)
Translates to: RQRGVGWTTELMLHKREVERTWS*QSTNEI
Trigger: AATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCTC...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS CCA 90 bp ATGCTTCCTCTTGGTGGCCTGAGACATGCTGAAGTCGTCCCACACTaGTTAGGAACGAAGAGACTGTCAACTCCTCCTCCTGAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: MLPLGGLRHAEVVPH*LGTKRLSTPPPEFL
Trigger: AAGGAACTCAGGAGGAGGAGTTGACAGTCTCTTCGTTCCTAACCAGTGTGGGACGACTTCAGCATGTCTCAGGCCACCAAGAGGAAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312234.6
ENST00000526449.1
ENST00000526451.5
ENST00000527051.1
ENST00000527249.5
ENST00000529973.1
ENST00000530462.5
ENST00000533544.6
CDS-3UTR CAA 90 bp TCAGAGAGGAGCCCTGCTTTGTCCTCATGCAGGGGTGAAGATGTGCAGAGCACCGAGTTCTGGTTGAGTTaGTCTGTTCCTGTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: SERSPALSSCRGEDVQSTEFWLS*SVPVVV
Trigger: CACAACAACAGGAACAGACAAACTCAACCAGAACTC...GGTGCTCTGCACATCTTCACCCCTGCATGAGGACAAAGCAGGGCTCCTCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CAA 90 bp AAACCCCTCCTTCTGCAGAGAGCGCACGTGGTCCTTGCAGAGCACAAACGAGATAGCTGGGAGTTCTGGTaGAGTTTGTCTGTTCCTGTT +
Preference number: 5 (lower is better)
Translates to: KPLLLQRAHVVLAEHKRDSWEFW*SLSVPV
Trigger: AACAGGAACAGACAAACTCAACCAGAACTCCCAGCT...ATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR CAA 90 bp AGTGATAGATGGTGCAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACAAGGCAGGAGAGTTACTaGAACCCAGTAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: SDRWCRVGEMRSYVGMDTRQESY*NPVGEG
Trigger: ACCTTCACCTACTGGGTTCAAGTAACTCTCCTGCCT...TGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp AGTGATAGATGGTGCAGAGTGGGAGAGATGAGGTCGTATGTGGGGATGGACACATTGATCCAGATGTTCTaGCGGTATTTGGAGGGCATG +
Preference number: 5 (lower is better)
Translates to: SDRWCRVGEMRSYVGMDTLIQMF*RYLEGM
Trigger: CATGCCCTCCAAATACCGCAAGAACATCTGGATCAA...TGTGTCCATCCCCACATACGACCTCATCTCTCCCACTCTGCACCATCTATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CTCCTCCTCACTCTCATGATACTGTCTGCGGTTTGTGTTAACAAACAGGTCAGAGAGCGCACGTGGTCCTaGCAGAGCACAAACGAGATT +
Preference number: 5 (lower is better)
Translates to: LLLTLMILSAVCVNKQVRERTWS*QSTNEI
Trigger: AATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCTC...TCTGACCTGTTTGTTAACACAAACCGCAGACAGTATCATGAGAGTGAGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529973.1
CDS-3UTR CAA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGAGCTGGGAGTTCTGGTaGAGTTTGTCTGTTCCTGTT +
Preference number: 5 (lower is better)
Translates to: RQRGVGWTTELMLHKREVSWEFW*SLSVPV
Trigger: AACAGGAACAGACAAACTCAACCAGAACTCCCAGCT...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS TCA 90 bp GAGTCTCAGGCTGCCTCCTCCTCTTCACTCTCCTCCTCACTCTCATaGTACTGTCTGCGGTTTGTGTTAACAAACAGGTCAGAATCATCT +
Preference number: 5 (lower is better)
Translates to: ESQAASSSSLSSSLS*YCLRFVLTNRSESS
Trigger: AGATGATTCTGACCTGTTTGTTAACACAAACCGCAGACAGTATCATGAGAGTGAGGAGGAGAGTGAAGAGGAGGAGGCAGCCTGAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000527249.5
ENST00000529964.5
ENST00000533544.6
CDS-3UTR CAA 90 bp AGGTTTGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTTCCACCTCATGCAGATaGTTCCCTGGGGTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: RFVMINVRYNWWPGWLFSSTSCR*FPGVLS
Trigger: ACTCAGGACCCCAGGGAACAATCTGCATGAGGTGGA...AGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATTCTCTGAATCAAATGTTCTTGCGGTATTaGGAGGGCATGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: LRHQNKSPTHQGFNSLNQMFLRY*EGMLTR
Trigger: CCTGGTGAGCATGCCCTCCAAATACCGCAAGAACAT...TTGATTCAGAGAATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp GTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTTAGTGTCCATCGATGGTGACTTGGGTTaGGGCACAGAGGTGAATGAT +
Preference number: 5 (lower is better)
Translates to: VLKQTSQSRSAGQCLVSIDGDLG*GTEVND
Trigger: ATCATTCACCTCTGTGCCCAAACCCAAGTCACCATC...GATGGACACTAAGCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CCACCCACAAGGTCTCTAATAAATAGGGAGCAGTTTTTCACTTCATCACAATCTCTCCTCCTGAGTTCCTaGGATGGCAGGCTCAGAACC +
Preference number: 5 (lower is better)
Translates to: PPTRSLINREQFFTSSQSLLLSS*DGRLRT
Trigger: GGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAG...AGATTGTGATGAAGTGAAAAACTGCTCCCTATTTATTAGAGACCTTGTGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp GATAAGACAGAAGTTTTGAAACAGACATCCCAGAGTAGATCTGCTGGGCAGTGCTTGATCCAGATGTTCTaGCGGTATTTGGAGGGCATG +
Preference number: 5 (lower is better)
Translates to: DKTEVLKQTSQSRSAGQCLIQMF*RYLEGM
Trigger: CATGCCCTCCAAATACCGCAAGAACATCTGGATCAA...GCACTGCCCAGCAGATCTACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp TGTAATGATAAACGTAAGGTACAACTGGTGGCCAGGCTGGCTGTTTTCTCACCTTTGATCCAGATGTTCTaGCGGTATTTGGAGGGCATG +
Preference number: 5 (lower is better)
Translates to: CNDKRKVQLVARLAVFSPLIQMF*RYLEGM
Trigger: CATGCCCTCCAAATACCGCAAGAACATCTGGATCAA...AGGTGAGAAAACAGCCAGCCTGGCCACCAGTTGTACCTTACGTTTATCATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CTCAGACACCAGAACAAGTCACCAACCCACCAGGGGTTTAATTCTCTGAATCAAAGCTGGGAGTTCTGGTaGAGTTTGTCTGTTCCTGTT +
Preference number: 5 (lower is better)
Translates to: LRHQNKSPTHQGFNSLNQSWEFW*SLSVPV
Trigger: AACAGGAACAGACAAACTCAACCAGAACTCCCAGCT...TTGATTCAGAGAATTAAACCCCTGGTGGGTTGGTGACTTGTTCTGGTGTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp AGACAGAGGGGTGTAGGGTGGACTACGGAATTGATGCTACACAAGAGGGAAGTGGATAAGACAGAAGTTTaGAAACAGACATCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: RQRGVGWTTELMLHKREVDKTEV*KQTSQS
Trigger: ACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC...CACTTCCCTCTTGTGTAGCATCAATTCCGTAGTCCACCCTACACCCCTCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp ATACTCAACAACACAAATACCCGACCAAAGTCTTTAAGAAAGCAAAAGAGGCCGATGTTCTTGCGGTATTaGGAGGGCATGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: ILNNTNTRPKSLRKQKRPMFLRY*EGMLTR
Trigger: CCTGGTGAGCATGCCCTCCAAATACCGCAAGAACAT...CGGCCTCTTTTGCTTTCTTAAAGACTTTGGTCGGGTATTTGTGTTGTTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp CTCATGAGAATGTCAGGGCTGGTTAGAAGAATGAAGGGTGAGGGTGGAAAAGCAGATAAGACAGAAGTTTaGAAACAGACATCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: LMRMSGLVRRMKGEGGKADKTEV*KQTSQS
Trigger: ACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC...TGCTTTTCCACCCTCACCCTTCATTCTTCTAACCAGCCCTGACATTCTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCAGAGTTCTGGTTGAGTTaGTCTGTTCCTGTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: MGDSTARSTLTHHIHNISEFWLS*SVPVVV
Trigger: CACAACAACAGGAACAGACAAACTCAACCAGAACTC...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS-3UTR CAA 90 bp ATGGGAGATTCTACAGCACGCTCGACACTAACACATCACATCCATAACATATCAGATAAGACAGAAGTTTaGAAACAGACATCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: MGDSTARSTLTHHIHNISDKTEV*KQTSQS
Trigger: ACTCTGGGATGTCTGTTTCAAAACTTCTGTCTTATC...TGATATGTTATGGATGTGATGTGTTAGTGTCGAGCGTGCTGTAGAATCTCCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312234.6
ENST00000526451.5
ENST00000533544.6
CDS CAA 90 bp CTCACCAGGAAGCGCTGCCCTTGGGCTGTCTCCACCTCATGCAGATaGTTCCCTGGGGTCCTGAGTACCGGCGGCCGCGACGGTAGCGTC +
Preference number: 6 (lower is better)
Translates to: LTRKRCPWAVSTSCR*FPGVLSTGGRDGSV
Trigger: GACGCTACCGTCGCGGCCGCCGGTACTCAGGACCCCAGGGAACAATCTGCATGAGGTGGAGACAGCCCAAGGGCAGCGCTTCCTGGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525767.5
CDS TCA 72 bp AGCACCTCCTTCACCACATGCTTCCTCTTGGTGGCCTaGGACATGCTGAAGTCGTCCCACACGGCGGCCGCG +
Preference number: 6 (lower is better)
Translates to: STSFTTCFLLVA*DMLKSSHTAAA
Trigger: CGCGGCCGCCGTGTGGGACGACTTCAGCATGTCTCAGGCCACCAAGAGGAAGCATGTGGTGAAGGAGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529964.5
CDS CCA 72 bp CCAGGAACGCTGCCGGAGCAACACCGCCGTCTAGGCTaGACGCTGAGAGAGGATCGTCCACGACTCACTTCA +
Preference number: 6 (lower is better)
Translates to: PGTLPEQHRRLG*TLREDRPRLTS
Trigger: TGAAGTGAGTCGTGGACGATCCTCTCTCAGCGTCCAGCCTAGACGGCGGTGTTGCTCCGGCAGCGTTCCTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312234.6
ENST00000527249.5
ENST00000532707.5
ENST00000533544.6
CDS CCA 72 bp TTCCCTGGGGTCCTGAGTACCCTGACAATCTGCTGCTaGTCGGAGGGCACTATGTGCTCCCCTAGCACCTCC +
Preference number: 6 (lower is better)
Translates to: FPGVLSTLTICC*SEGTMCSPSTS
Trigger: GGAGGTGCTAGGGGAGCACATAGTGCCCTCCGACCAGCAGCAGATTGTCAGGGTACTCAGGACCCCAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000312234.6
ENST00000526449.1
ENST00000526451.5
ENST00000527051.1
ENST00000527249.5
ENST00000529964.5
ENST00000529973.1
ENST00000530462.5
ENST00000532707.5
ENST00000533544.6
CDS GCA 72 bp TTGTTCCCTGGGGTCCTGAGTACCCTGACAATCTGCTaGTGGTCGGAGGGCACTATGTGCTCCCCTAGCACC +
Preference number: 6 (lower is better)
Translates to: LFPGVLSTLTIC*WSEGTMCSPST
Trigger: GGTGCTAGGGGAGCACATAGTGCCCTCCGACCAGCAGCAGATTGTCAGGGTACTCAGGACCCCAGGGAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000312234.6
ENST00000526449.1
ENST00000526451.5
ENST00000527051.1
ENST00000527249.5
ENST00000529964.5
ENST00000529973.1
ENST00000530462.5
ENST00000532707.5
ENST00000533544.6
CDS GCA 72 bp CAGGTCTCCAGTGTTCCCAGTTCCCACCAGTCCAACTaGGAGGAGTGCGACGTGAGTCTGAGTCTGATCCCT +
Preference number: 6 (lower is better)
Translates to: QVSSVPSSHQSN*EECDVSLSLIP
Trigger: AGGGATCAGACTCAGACTCACGTCGCACTCCTCGCAGTTGGACTGGTGGGAACTGGGAACACTGGAGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526449.1
ENST00000526451.5
ENST00000527249.5
ENST00000529964.5
ENST00000530462.5
ENST00000533544.6
CDS GCA 72 bp AGTGTTCCCAGTTCCCACCAGTCCAACTGCGAGGAGTaGGACGTGAGTCTGAGTCTGATCCCTCCGAAAACC +
Preference number: 6 (lower is better)
Translates to: SVPSSHQSNCEE*DVSLSLIPPKT
Trigger: GGTTTTCGGAGGGATCAGACTCAGACTCACGTCGCACTCCTCGCAGTTGGACTGGTGGGAACTGGGAACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526449.1
ENST00000526451.5
ENST00000527249.5
ENST00000529964.5
ENST00000530462.5
ENST00000533544.6
CDS GCA 72 bp TTGCGGTATTTGGAGGGCATGCTCACCAGGAAGCGCTaGCCTTGGGCTGTCTCCACCTCATGCAGATTGTTC +
Preference number: 6 (lower is better)
Translates to: LRYLEGMLTRKR*PWAVSTSCRLF
Trigger: GAACAATCTGCATGAGGTGGAGACAGCCCAAGGGCAGCGCTTCCTGGTGAGCATGCCCTCCAAATACCGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526449.1
ENST00000526451.5
ENST00000527051.1
ENST00000527249.5
ENST00000529964.5
ENST00000530462.5
ENST00000532707.5
ENST00000533544.6
CDS CAA 72 bp GAACGAAGAGACTGTCAACTCCTCCTCCTGAGTTCCTaGGATGGCAGGCTCAGAACCCAGGACTGTTCGGCG +
Preference number: 6 (lower is better)
Translates to: ERRDCQLLLLSS*DGRLRTQDCSA
Trigger: CGCCGAACAGTCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGACAGTCTCTTCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526449.1
ENST00000526451.5
CDS CCA 72 bp TCAGGCCAAAACCCCTCCTTCTGCAGAGAGCGCACGTaGTCCTTGCAGAGCACAAACGAGATTTCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: SGQNPSFCRERT*SLQSTNEISAF
Trigger: GAAGGCTGAAATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000527249.5
ENST00000529964.5
ENST00000529973.1
ENST00000530462.5
ENST00000532707.5
ENST00000533544.6
CDS CAA 72 bp AAGTCCCCTCTCTTGATCCAGATGTTCTTGCGGTATTaGGAGGGCATGCTCACCAGGAAGCGCTGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: KSPLLIQMFLRY*EGMLTRKRCPW
Trigger: CCAAGGGCAGCGCTTCCTGGTGAGCATGCCCTCCAAATACCGCAAGAACATCTGGATCAAGAGAGGGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000527051.1
ENST00000527249.5
ENST00000529964.5
ENST00000530462.5
ENST00000532707.5
ENST00000533544.6
CDS CAA 90 bp ACAATGAGAAAGTCCCCTCTCTTGATCCAGATGTTCTTGCGGTATTaGGAGGGCATGCTCACCAGGAAGCGCTGCCCTTGGGCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: TMRKSPLLIQMFLRY*EGMLTRKRCPWAVS
Trigger: GGAGACAGCCCAAGGGCAGCGCTTCCTGGTGAGCATGCCCTCCAAATACCGCAAGAACATCTGGATCAAGAGAGGGGACTTTCTCATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000527051.1
ENST00000527249.5
ENST00000529964.5
ENST00000530462.5
ENST00000532707.5
ENST00000533544.6
CDS TCA 72 bp CTGGTTAGGAACGAAGAGACTGTCAACTCCTCCTCCTaGGTTCCTTGGATGGCAGGCTCAGAACCCAGGAAC +
Preference number: 6 (lower is better)
Translates to: LVRNEETVNSSS*VPWMAGSEPRN
Trigger: GTTCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGACAGTCTCTTCGTTCCTAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312234.6
CDS TCA 72 bp CTGGTTAGGAACGAAGAGACTGTCAACTCCTCCTCCTaGGTTCCTTGGATGGCAGGCTCAGAACCCAGGACT +
Preference number: 6 (lower is better)
Translates to: LVRNEETVNSSS*VPWMAGSEPRT
Trigger: AGTCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGACAGTCTCTTCGTTCCTAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000526449.1
ENST00000526451.5
ENST00000527051.1
ENST00000527249.5
ENST00000529973.1
ENST00000530462.5
ENST00000533544.6
CDS CCA 72 bp CTTGGTGGCCTGAGACATGCTGAAGTCGTCCCACACTaGTTAGGAACGAAGAGACTGTCAACTCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: LGGLRHAEVVPH*LGTKRLSTPPP
Trigger: AGGAGGAGGAGTTGACAGTCTCTTCGTTCCTAACCAGTGTGGGACGACTTCAGCATGTCTCAGGCCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312234.6
ENST00000526449.1
ENST00000526451.5
ENST00000527051.1
ENST00000527249.5
ENST00000529973.1
ENST00000530462.5
ENST00000533544.6
CDS TCA 72 bp TCACCACATGCTTCCTCTTGGTGGCCTGAGACATGCTaGAGTCGTCCCACACTGGTTAGGAACGAAGAGACT +
Preference number: 6 (lower is better)
Translates to: SPHASSWWPETC*SRPTLVRNEET
Trigger: AGTCTCTTCGTTCCTAACCAGTGTGGGACGACTTCAGCATGTCTCAGGCCACCAAGAGGAAGCATGTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312234.6
ENST00000526449.1
ENST00000526451.5
ENST00000527051.1
ENST00000527249.5
ENST00000529973.1
ENST00000530462.5
ENST00000533544.6
CDS TCA 72 bp AGCACCTCCTTCACCACATGCTTCCTCTTGGTGGCCTaGGACATGCTGAAGTCGTCCCACAACTTAGTCTCT +
Preference number: 6 (lower is better)
Translates to: STSFTTCFLLVA*DMLKSSHNLVS
Trigger: AGAGACTAAGTTGTGGGACGACTTCAGCATGTCTCAGGCCACCAAGAGGAAGCATGTGGTGAAGGAGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532707.5
CDS CAA 72 bp GAACGAAGAGACTGTCAACTCCTCCTCCTGAGTTCCTaGGATGGCAGGCTCAGAACCCAGGAACTTAGTCTC +
Preference number: 6 (lower is better)
Translates to: ERRDCQLLLLSS*DGRLRTQELSL
Trigger: GAGACTAAGTTCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGACAGTCTCTTCGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312234.6
CDS CAA 72 bp CAAAACCCCTCCTTCTGCAGAGAGCGCACGTGGTCCTaGCAGAGCACAAACGAGATTTCAGCCTTCACCTTT +
Preference number: 6 (lower is better)
Translates to: QNPSFCRERTWS*QSTNEISAFTF
Trigger: AAAGGTGAAGGCTGAAATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000527249.5
ENST00000529964.5
ENST00000529973.1
ENST00000530462.5
ENST00000532707.5
ENST00000533544.6
CDS CAA 72 bp GAACGAAGAGACTGTCAACTCCTCCTCCTGAGTTCCTaGGATGGCAGGCTCAGAACCCAGGACTGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: ERRDCQLLLLSS*DGRLRTQDCSE
Trigger: TTCAGAACAGTCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGACAGTCTCTTCGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527051.1
ENST00000530462.5
ENST00000533544.6
CDS CAA 90 bp AGGATTACAGGAGTAATCCTCTCACCTCTCTTGATCCAGATGTTCTaGCGGTATTTGGAGGGCATGCTCACCAGGAAGCGCTGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: RITGVILSPLLIQMF*RYLEGMLTRKRCPW
Trigger: CCAAGGGCAGCGCTTCCTGGTGAGCATGCCCTCCAAATACCGCAAGAACATCTGGATCAAGAGAGGTGAGAGGATTACTCCTGTAATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526449.1
CDS GCA 72 bp AAAACCCCTCCTTCTGCAGAGAGCGCACGTGGTCCTTaGAGAGCACAAACGAGATTTCAGCCTTCACCTTTT +
Preference number: 6 (lower is better)
Translates to: KTPPSAESARGP*RAQTRFQPSPF
Trigger: AAAAGGTGAAGGCTGAAATCTCGTTTGTGCTCTGCAAGGACCACGTGCGCTCTCTGCAGAAGGAGGGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000527249.5
ENST00000529964.5
ENST00000529973.1
ENST00000530462.5
ENST00000532707.5
ENST00000533544.6
CDS CAA 72 bp ACAATGAGAAAGTCCCCTCTCTTGATCCAGATGTTCTaGCGGTATTTGGAGGGCATGCTCACCAGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: TMRKSPLLIQMF*RYLEGMLTRKR
Trigger: GCGCTTCCTGGTGAGCATGCCCTCCAAATACCGCAAGAACATCTGGATCAAGAGAGGGGACTTTCTCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000527051.1
ENST00000527249.5
ENST00000529964.5
ENST00000530462.5
ENST00000532707.5
ENST00000533544.6
CDS CAA 72 bp GAACGAAGAGACTGTCAACTCCTCCTCCTGAGTTCCTaGGATGGCAGGCTCAGAACCCAGGACTGTTACTTA +
Preference number: 6 (lower is better)
Translates to: ERRDCQLLLLSS*DGRLRTQDCYL
Trigger: TAAGTAACAGTCCTGGGTTCTGAGCCTGCCATCCAAGGAACTCAGGAGGAGGAGTTGACAGTCTCTTCGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527249.5
CDS TCA 72 bp GCTGCCTCCTCCTCTTCACTCTCCTCCTCACTCTCATaGTACTGTCTGCGGTTTGTGTTAACAAACAGGTCA +
Preference number: 6 (lower is better)
Translates to: AASSSSLSSSLS*YCLRFVLTNRS
Trigger: TGACCTGTTTGTTAACACAAACCGCAGACAGTATCATGAGAGTGAGGAGGAGAGTGAAGAGGAGGAGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312234.6
ENST00000525767.5
ENST00000526451.5
ENST00000527249.5
ENST00000529964.5
ENST00000533544.6
CDS CAA 72 bp AGTGCCAGGATTACAGGAGTAATCCTCTCACCTCTCTaGATCCAGATGTTCTTGCGGTATTTGGAGGGCATG +
Preference number: 6 (lower is better)
Translates to: SARITGVILSPL*IQMFLRYLEGM
Trigger: CATGCCCTCCAAATACCGCAAGAACATCTGGATCAAGAGAGGTGAGAGGATTACTCCTGTAATCCTGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526449.1
CDS CAA 90 bp AACTCAGCACTGTTACAGTATGGTATGAGGCCACCACTTCTCCTGTaGGCCTTCTTAGTTTCTCTCCAACCTCCCCTTTTCCCTAGTTTA +
Preference number: 6 (lower is better)
Translates to: NSALLQYGMRPPLLL*AFLVSLQPPLFPSL
Trigger: TAAACTAGGGAAAAGGGGAGGTTGGAGAGAAACTAAGAAGGCCAACAGGAGAAGTGGTGGCCTCATACCATACTGTAACAGTGCTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527051.1
CDS CCA 72 bp TTACTGAGGGGTGACACGGTGTCTTGGTTAAGAACATaGGTTCTGAAGTCTAACTGCCTGGATTCAAATCCT +
Preference number: 6 (lower is better)
Translates to: LLRGDTVSWLRT*VLKSNCLDSNP
Trigger: AGGATTTGAATCCAGGCAGTTAGACTTCAGAACCCATGTTCTTAACCAAGACACCGTGTCACCCCTCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527051.1
CDS GCA 72 bp GTGTCTTGGTTAAGAACATGGGTTCTGAAGTCTAACTaGCTGGATTCAAATCCTACCTTGGTTTATTTCCTA +
Preference number: 6 (lower is better)
Translates to: VSWLRTWVLKSN*LDSNPTLVYFL
Trigger: TAGGAAATAAACCAAGGTAGGATTTGAATCCAGGCAGTTAGACTTCAGAACCCATGTTCTTAACCAAGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527051.1