Pregenerated sensors for EIF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000173812Ensembl transcript IDs: ENST00000462917.1, ENST00000469257.2, ENST00000469308.1, ENST00000482111.1, ENST00000586699.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCATGAATGCCCTTGTTATAGCCCTTGCATTTACTCTCCACTCTaGGCCCTTAAACCAAGGCTGTTACTACTGAGGGGGCGCCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: QHECPCYSPCIYSPL*ALKPRLLLLRGRQD Trigger: ATCTTGGCGCCCCCTCAGTAGTAACAGCCTTGGTTTAAGGGCGCAGAGTGGAGAGTAAATGCAAGGGCTATAACAAGGGCATTCATGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR TCA 90 bp | AGGGACAAGCTCATAAAGGTTTTTCTTGGCCAAATTCAGGCCCGTTaGGAAGCTGTGGGTGTGGACGAATCCTCCACTGCCCATTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: RDKLIKVFLGQIQAR*EAVGVDESSTAHFY Trigger: ATAGAAATGGGCAGTGGAGGATTCGTCCACACCCACAGCTTCTCAACGGGCCTGAATTTGGCCAAGAAAAACCTTTATGAGCTTGTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR CCA 90 bp | AGGTTTTTCTTGGCCAAATTCAGGCCCGTTGAGAAGCTGTGGGTGTaGACGAATCCTCCACTGCCCATTTCTATGGTTCCTTTATATGCA | + |
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Preference number: 1 (lower is better) Translates to: RFFLAKFRPVEKLWV*TNPPLPISMVPLYA Trigger: TGCATATAAAGGAACCATAGAAATGGGCAGTGGAGGATTCGTCCACACCCACAGCTTCTCAACGGGCCTGAATTTGGCCAAGAAAAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR CCA 90 bp | AAAAACCAGTTGACCAGAGAGGGACAAGCTCATAAAGGTTTTTCTTaGCCAAATTCAGGCCCGTTGAGAAGCTGTGGGTGTGGACGAATC | + |
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Preference number: 1 (lower is better) Translates to: KNQLTREGQAHKGFS*PNSGPLRSCGCGRI Trigger: GATTCGTCCACACCCACAGCTTCTCAACGGGCCTGAATTTGGCCAAGAAAAACCTTTATGAGCTTGTCCCTCTCTGGTCAACTGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR GCA 90 bp | AATTCAGGCCCGTTGAGAAGCTGTGGGTGTGGACGAATCCTCCACTaGCCATTTCTATGGTTCCTTTATATGCACAAGATCGACTATATA | + |
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Preference number: 1 (lower is better) Translates to: NSGPLRSCGCGRILH*PFLWFLYMHKIDYI Trigger: TATATAGTCGATCTTGTGCATATAAAGGAACCATAGAAATGGGCAGTGGAGGATTCGTCCACACCCACAGCTTCTCAACGGGCCTGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR GCA 90 bp | TTTGTGGATCTTAACCCACAGCATGAATGCCCTTGTTATAGCCCTTaGATTTACTCTCCACTCTGCGCCCTTAAACCAAGGCTGTTACTA | + |
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Preference number: 1 (lower is better) Translates to: FVDLNPQHECPCYSP*IYSPLCALKPRLLL Trigger: TAGTAACAGCCTTGGTTTAAGGGCGCAGAGTGGAGAGTAAATGCAAGGGCTATAACAAGGGCATTCATGCTGTGGGTTAAGATCCACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR CCA 90 bp | TACTACAAACTTACTACCCAGAGTATACACATTCCTAGCGATTTGTaGATCTTAACCCACAGCATGAATGCCCTTGTTATAGCCCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: YYKLTTQSIHIPSDL*ILTHSMNALVIALA Trigger: TGCAAGGGCTATAACAAGGGCATTCATGCTGTGGGTTAAGATCCACAAATCGCTAGGAATGTGTATACTCTGGGTAGTAAGTTTGTAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR CAA 90 bp | GAGGGACAAGCTCATAAAGGTTTTTCTTGGCCAAATTCAGGCCCGTaGAGAAGCTGTGGGTGTGGACGAATCCTCCACTGCCCATTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: EGQAHKGFSWPNSGP*RSCGCGRILHCPFL Trigger: TAGAAATGGGCAGTGGAGGATTCGTCCACACCCACAGCTTCTCAACGGGCCTGAATTTGGCCAAGAAAAACCTTTATGAGCTTGTCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR-3UTR TCA 90 bp | AACCCACAGCATGAATGCCCTTGTTATAGCCCTTGCATTTACTCTCCACTCTGCATTAACAGCACAGCATaGCTCTGGCTAAATGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: NPQHECPCYSPCIYSPLCINSTA*LWLNAC Trigger: GCAAGCATTTAGCCAGAGTCATGCTGTGCTGTTAAT...GCAGAGTGGAGAGTAAATGCAAGGGCTATAACAAGGGCATTCATGCTGTGGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCTTCATAAGGGATGGCCTCCCAACACTTAACTTCAGCTCTTCAAATACTTACAGCTGGTGCTTCTaGCTTACCCCATCCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LSFIRDGLPTLNFSSSNTYSWCF*LTPSSP Trigger: AGGAGAGGATGGGGTAAGGCAGAAGCACCAGCTGTA...AGTATTTGAAGAGCTGAAGTTAAGTGTTGGGAGGCCATCCCTTATGAAGGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCCTAGCGATTTGTGGATCTTAACCCACAGCATGAATGCCCTTGTTATAGCCCAAAAACAGTTGACCTaGTGGGCATGGTGGCTCATG | + |
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Preference number: 2 (lower is better) Translates to: IPSDLWILTHSMNALVIAQKQLT*WAWWLM Trigger: CATGAGCCACCATGCCCAGCAGGTCAACTGTTTTTG...GGCTATAACAAGGGCATTCATGCTGTGGGTTAAGATCCACAAATCGCTAGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCCTAGCGATTTGTGGATCTTAACCCACAGCATGAATGCCCTTGTTATAGCCCATTCTCCAGGACACTaGTTAACAGCACAGCATGAC | + |
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Preference number: 2 (lower is better) Translates to: IPSDLWILTHSMNALVIAHSPGH*LTAQHD Trigger: GTCATGCTGTGCTGTTAATCAGTGTCCTGGAGAATG...GGCTATAACAAGGGCATTCATGCTGTGGGTTAAGATCCACAAATCGCTAGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR-3UTR CCA 90 bp | AACCCACAGCATGAATGCCCTTGTTATAGCCCTTGCATTTACTCTCCACTCTGCCATAAAGGTTTTTCTTaGCCAAATTCAGGCCCGTTG | + |
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Preference number: 2 (lower is better) Translates to: NPQHECPCYSPCIYSPLCHKGFS*PNSGPL Trigger: CAACGGGCCTGAATTTGGCCAAGAAAAACCTTTATG...GCAGAGTGGAGAGTAAATGCAAGGGCTATAACAAGGGCATTCATGCTGTGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR-3UTR GCA 90 bp | CTCATGTCCTTACAAATACAGGAACAACCCAGCATTTGGCTTATTTTACAATGCACCCAACTGAGGTTTTaGTCAGCCTTACAAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LMSLQIQEQPSIWLILQCTQLRF*SALQSQ Trigger: TTGGCTTTGTAAGGCTGAGCAAAACCTCAGTTGGGT...GCATTGTAAAATAAGCCAAATGCTGGGTTGTTCCTGTATTTGTAAGGACATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586699.1 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTAATACTACAAACTTACTACCCAGAGTATACACATTCCTAGCGATTTGTCACTGCCCATTTCTATaGTTCCTTTATATGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: PSNTTNLLPRVYTFLAICHCPFL*FLYMHK Trigger: CTTGTGCATATAAAGGAACCATAGAAATGGGCAGTG...ACAAATCGCTAGGAATGTGTATACTCTGGGTAGTAAGTTTGTAGTATTAGAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR CCA 72 bp | TTGGCCAAATTCAGGCCCGTTGAGAAGCTGTGGGTGTaGACGAATCCTCCACTGCCCATTTCTATGGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LAKFRPVEKLWV*TNPPLPISMVP Trigger: AGGAACCATAGAAATGGGCAGTGGAGGATTCGTCCACACCCACAGCTTCTCAACGGGCCTGAATTTGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR TCA 72 bp | CTCATAAAGGTTTTTCTTGGCCAAATTCAGGCCCGTTaGGAAGCTGTGGGTGTGGACGAATCCTCCACTGCC | + |
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Preference number: 3 (lower is better) Translates to: LIKVFLGQIQAR*EAVGVDESSTA Trigger: GGCAGTGGAGGATTCGTCCACACCCACAGCTTCTCAACGGGCCTGAATTTGGCCAAGAAAAACCTTTATGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR GCA 72 bp | TGCCCTTGTTATAGCCCTTGCATTTACTCTCCACTCTaGGCCCTTAAACCAAGGCTGTTACTACTGAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: CPCYSPCIYSPL*ALKPRLLLLRG Trigger: CCCCCTCAGTAGTAACAGCCTTGGTTTAAGGGCGCAGAGTGGAGAGTAAATGCAAGGGCTATAACAAGGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR TCA 72 bp | TTATTGTGTAGCACGGCTGTGAGGCTCATTGTTGAATaGAGCATCCTTAGGCAGCACGTGACTGCATGCAGA | + |
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Preference number: 3 (lower is better) Translates to: LLCSTAVRLIVE*SILRQHVTACR Trigger: TCTGCATGCAGTCACGTGCTGCCTAAGGATGCTTCATTCAACAATGAGCCTCACAGCCGTGCTACACAATAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR GCA 72 bp | CCGTTGAGAAGCTGTGGGTGTGGACGAATCCTCCACTaGCCATTTCTATGGTTCCTTTATATGCACAAGATC | + |
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Preference number: 3 (lower is better) Translates to: PLRSCGCGRILH*PFLWFLYMHKI Trigger: GATCTTGTGCATATAAAGGAACCATAGAAATGGGCAGTGGAGGATTCGTCCACACCCACAGCTTCTCAACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR GCA 72 bp | CTTAACCCACAGCATGAATGCCCTTGTTATAGCCCTTaGATTTACTCTCCACTCTGCGCCCTTAAACCAAGG | + |
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Preference number: 3 (lower is better) Translates to: LNPQHECPCYSP*IYSPLCALKPR Trigger: CCTTGGTTTAAGGGCGCAGAGTGGAGAGTAAATGCAAGGGCTATAACAAGGGCATTCATGCTGTGGGTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR-3UTR CAA 90 bp | GATCTTAACCCACAGCATGAATGCCCTTGTTATAGCCCTTGCATTTACTCTCCAAGACAGGCAGATCACTaGAGGCCAGGTGTTCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: DLNPQHECPCYSPCIYSPRQADH*RPGVQD Trigger: GTCTTGAACACCTGGCCTCAAGTGATCTGCCTGTCT...TGGAGAGTAAATGCAAGGGCTATAACAAGGGCATTCATGCTGTGGGTTAAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGCCTCCCAACACTTAACTTCAGCTCTTCAAATACTTGTCATTAAACCTTCTGGTAAGAGGGCCTCTTaGAGCTCTGTCCACCTAGTC | + |
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Preference number: 3 (lower is better) Translates to: MASQHLTSALQILVIKPSGKRAS*SSVHLV Trigger: GACTAGGTGGACAGAGCTCAAAGAGGCCCTCTTACC...AGAAGGTTTAATGACAAGTATTTGAAGAGCTGAAGTTAAGTGTTGGGAGGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGCCTCCCAACACTTAACTTCAGCTCTTCAAATACTTGTCATTAAACCTTCTCCAAATTCAGGCCCGTaGAGAAGCTGTGGGTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: MASQHLTSALQILVIKPSPNSGP*RSCGCG Trigger: TCCACACCCACAGCTTCTCAACGGGCCTGAATTTGG...AGAAGGTTTAATGACAAGTATTTGAAGAGCTGAAGTTAAGTGTTGGGAGGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR TCA 72 bp | GGCTCATTGTTGAATGAAGCATCCTTAGGCAGCACGTaGCTGCATGCAGATATGTGTGCTGAAAGAACTTTG | + |
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Preference number: 3 (lower is better) Translates to: GSLLNEASLGST*LHADMCAERTL Trigger: CAAAGTTCTTTCAGCACACATATCTGCATGCAGTCACGTGCTGCCTAAGGATGCTTCATTCAACAATGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR GCA 72 bp | ATTAATGGACCCAGGAACAGAACTTGGTCTTTTACTTaGCATTCATTGTCCTTCATAAGGGATGGCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: INGPRNRTWSFT*HSLSFIRDGLP Trigger: TGGGAGGCCATCCCTTATGAAGGACAATGAATGGCAAGTAAAAGACCAAGTTCTGTTCCTGGGTCCATTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR-3UTR CAA 90 bp | CTCATGTCCTTACAAATACAGGAACAACCCAGCATTTGGCTTATTTTACAATGCAACCCAACTGAGGTTTaGCTCAGCCTTACAAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LMSLQIQEQPSIWLILQCNPTEV*LSLTKP Trigger: TGGCTTTGTAAGGCTGAGCAAAACCTCAGTTGGGTT...GCATTGTAAAATAAGCCAAATGCTGGGTTGTTCCTGTATTTGTAAGGACATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586699.1 |
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| 3UTR CCA 72 bp | CTTACTACCCAGAGTATACACATTCCTAGCGATTTGTaGATCTTAACCCACAGCATGAATGCCCTTGTTATA | + |
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Preference number: 3 (lower is better) Translates to: LTTQSIHIPSDL*ILTHSMNALVI Trigger: TATAACAAGGGCATTCATGCTGTGGGTTAAGATCCACAAATCGCTAGGAATGTGTATACTCTGGGTAGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR GCA 72 bp | ATACAGGAACAACCCAGCATTTGGCTTATTTTACAATaGATCTATATGCTATTCAAATTTGCATCTGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: IQEQPSIWLILQ*IYMLFKFASVK Trigger: CTTCACAGATGCAAATTTGAATAGCATATAGATGCATTGTAAAATAAGCCAAATGCTGGGTTGTTCCTGTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586699.1 |
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| CDS-3UTR GCA 90 bp | AAACTTACTACCCAGAGTATACACATTCCTAGCGATTTGTGGATCTTAACCCACTCGGTGGAAACGGCCTaGGGAAGGCGGCGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: KLTTQSIHIPSDLWILTHSVETA*GRRRRR Trigger: CCGCCGCCGCCGCCTTCCGCAGGCCGTTTCCACCGA...GTGGGTTAAGATCCACAAATCGCTAGGAATGTGTATACTCTGGGTAGTAAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR GCA 90 bp | AGGCCCGTTGAGAAGCTGTGGGTGTGGACGAATCCTCCACTGCCCATTTCTATGTACAGCTGGTGCTTCTaGCTTACCCCATCCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RPVEKLWVWTNPPLPISMYSWCF*LTPSSP Trigger: AGGAGAGGATGGGGTAAGGCAGAAGCACCAGCTGTA...CATAGAAATGGGCAGTGGAGGATTCGTCCACACCCACAGCTTCTCAACGGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR TCA 90 bp | AACCCACAGCATGAATGCCCTTGTTATAGCCCTTGCATTTACTCTCCACTCTGCGACAGGCAGATCACTTaGGGCCAGGTGTTCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: NPQHECPCYSPCIYSPLCDRQIT*GQVFKT Trigger: GGTCTTGAACACCTGGCCTCAAGTGATCTGCCTGTC...GCAGAGTGGAGAGTAAATGCAAGGGCTATAACAAGGGCATTCATGCTGTGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR TCA 90 bp | CATAAAGGTTTTTCTTGGCCAAATTCAGGCCCGTTGAGAAGCTGTGGGTGTGGAGCTTGCAAAAACAGTTaGCCTGCTGGGCATGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: HKGFSWPNSGPLRSCGCGACKNS*PAGHGG Trigger: GCCACCATGCCCAGCAGGTCAACTGTTTTTGCAAGC...TCCACACCCACAGCTTCTCAACGGGCCTGAATTTGGCCAAGAAAAACCTTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR CAA 72 bp | GCTCATAAAGGTTTTTCTTGGCCAAATTCAGGCCCGTaGAGAAGCTGTGGGTGTGGACGAATCCTCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: AHKGFSWPNSGP*RSCGCGRILHC Trigger: GCAGTGGAGGATTCGTCCACACCCACAGCTTCTCAACGGGCCTGAATTTGGCCAAGAAAAACCTTTATGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR GCA 90 bp | CATAAAGGTTTTTCTTGGCCAAATTCAGGCCCGTTGAGAAGCTGTGGGTGTGGACAAAAACAGTTGACCTaGTGGGCATGGTGGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: HKGFSWPNSGPLRSCGCGQKQLT*WAWWLM Trigger: CATGAGCCACCATGCCCAGCAGGTCAACTGTTTTTG...TCCACACCCACAGCTTCTCAACGGGCCTGAATTTGGCCAAGAAAAACCTTTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR TCA 90 bp | TCCCCAGCAGAAGCTAACAGACAGGATCTGAGATTTGCCAGCAGAGAGGCACAATGCCTTCCAAGGTTCTaGATTAGTGTGAGAATGAGA | + |
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Preference number: 4 (lower is better) Translates to: SPAEANRQDLRFASREAQCLPRF*ISVRMR Trigger: TCTCATTCTCACACTAATTCAGAACCTTGGAAGGCA...TTGTGCCTCTCTGCTGGCAAATCTCAGATCCTGTCTGTTAGCTTCTGCTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586699.1 |
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| CDS-3UTR GCA 90 bp | AACCCACAGCATGAATGCCCTTGTTATAGCCCTTGCATTTACTCTCCACTCTGCAACCCACAGCATGAATaGCCTTGTTATAGCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: NPQHECPCYSPCIYSPLCNPQHE*PCYSPC Trigger: GCAAGGGCTATAACAAGGGCATTCATGCTGTGGGTT...GCAGAGTGGAGAGTAAATGCAAGGGCTATAACAAGGGCATTCATGCTGTGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR TCA 90 bp | TGTTATAGCCCTTGCATTTACTCTCCACTCTGCGCCCTTAAACCAAGGCTGTTAAGGCTCATTGTTGAATaGAGCATCCTTAGGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: CYSPCIYSPLCALKPRLLRLIVE*SILRQH Trigger: GTGCTGCCTAAGGATGCTTCATTCAACAATGAGCCT...TAACAGCCTTGGTTTAAGGGCGCAGAGTGGAGAGTAAATGCAAGGGCTATAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR GCA 90 bp | CCAACTTTTATGTCCCCAGCAGAAGCTAACAGACAGGATCTGAGATTTGCCAGCACAGGATCTGAGATTTaGCAGCAGAGAGGCACAAAT | + |
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Preference number: 4 (lower is better) Translates to: PTFMSPAEANRQDLRFASTGSEI*QQRGTN Trigger: ATTTGTGCCTCTCTGCTGGCAAATCTCAGATCCTGT...GCTGGCAAATCTCAGATCCTGTCTGTTAGCTTCTGCTGGGGACATAAAAGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586699.1 |
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| CDS-3UTR GCA 90 bp | CCAACTTTTATGTCCCCAGCAGAAGCTAACAGACAGGATCTGAGATTTGCCAGCACCCAACTGAGGTTTTaGTCAGCCTTACAAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: PTFMSPAEANRQDLRFASTQLRF*SALQSQ Trigger: TTGGCTTTGTAAGGCTGAGCAAAACCTCAGTTGGGT...GCTGGCAAATCTCAGATCCTGTCTGTTAGCTTCTGCTGGGGACATAAAAGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000586699.1 |
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| CDS-3UTR TCA 90 bp | GATCTTAACCCACAGCATGAATGCCCTTGTTATAGCCCTTGCATTTACTCTCCATGTGTAGCACGGCTGTaGGGCTCATTGTTGAATGAA | + |
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Preference number: 4 (lower is better) Translates to: DLNPQHECPCYSPCIYSPCVARL*GSLLNE Trigger: TTCATTCAACAATGAGCCTCACAGCCGTGCTACACA...TGGAGAGTAAATGCAAGGGCTATAACAAGGGCATTCATGCTGTGGGTTAAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR TCA 90 bp | TCCCCAGCAGAAGCTAACAGACAGGATCTGAGATTTGCCAGCAGAGAGGCACAATCAAATTTGCATCTGTaGAGTAGATCCACAGAAACA | + |
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Preference number: 4 (lower is better) Translates to: SPAEANRQDLRFASREAQSNLHL*SRSTET Trigger: TGTTTCTGTGGATCTACTTCACAGATGCAAATTTGA...TTGTGCCTCTCTGCTGGCAAATCTCAGATCCTGTCTGTTAGCTTCTGCTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586699.1 |
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| CDS-3UTR GCA 90 bp | AGCCCTTGCATTTACTCTCCACTCTGCGCCCTTAAACCAAGGCTGTTACTACTGATGACTCTGGCTAAATaGTTGCAAAAACAGTTGACC | + |
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Preference number: 4 (lower is better) Translates to: SPCIYSPLCALKPRLLLLMTLAK*LQKQLT Trigger: GGTCAACTGTTTTTGCAAGCATTTAGCCAGAGTCAT...CAGTAGTAACAGCCTTGGTTTAAGGGCGCAGAGTGGAGAGTAAATGCAAGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR CCA 90 bp | CCTTCTAATACTACAAACTTACTACCCAGAGTATACACATTCCTAGCGATTTGTGAGAAGCTGTGGGTGTaGACGAATCCTCCACTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PSNTTNLLPRVYTFLAICEKLWV*TNPPLP Trigger: GGGCAGTGGAGGATTCGTCCACACCCACAGCTTCTC...ACAAATCGCTAGGAATGTGTATACTCTGGGTAGTAAGTTTGTAGTATTAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR CCA 90 bp | ATCCTCCACTGCCCATTTCTATGGTTCCTTTATATGCACAAGATCGACTATATACCCGTTGAGAAGCTGTaGGTGTGGACGAATCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ILHCPFLWFLYMHKIDYIPVEKL*VWTNPP Trigger: TGGAGGATTCGTCCACACCCACAGCTTCTCAACGGG...TATATAGTCGATCTTGTGCATATAAAGGAACCATAGAAATGGGCAGTGGAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR CCA 90 bp | CTGTGGGTGTGGACGAATCCTCCACTGCCCATTTCTATGGTTCCTTTATATGCAATTCCTAGCGATTTGTaGATCTTAACCCACAGCATG | + |
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Preference number: 4 (lower is better) Translates to: LWVWTNPPLPISMVPLYAIPSDL*ILTHSM Trigger: CATGCTGTGGGTTAAGATCCACAAATCGCTAGGAAT...TGCATATAAAGGAACCATAGAAATGGGCAGTGGAGGATTCGTCCACACCCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR GCA 90 bp | GAAGCTGTGGGTGTGGACGAATCCTCCACTGCCCATTTCTATGGTTCCTTTATAACTTGGTCTTTTACTTaGCATTCATTGTCCTTCATA | + |
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Preference number: 4 (lower is better) Translates to: EAVGVDESSTAHFYGSFITWSFT*HSLSFI Trigger: TATGAAGGACAATGAATGGCAAGTAAAAGACCAAGT...TATAAAGGAACCATAGAAATGGGCAGTGGAGGATTCGTCCACACCCACAGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR CAA 72 bp | AAACTTACTACCCAGAGTATACACATTCCTAGCGATTaGTGGATCTTAACCCACAGCATGAATGCCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: KLTTQSIHIPSD*WILTHSMNALV Trigger: AACAAGGGCATTCATGCTGTGGGTTAAGATCCACAAATCGCTAGGAATGTGTATACTCTGGGTAGTAAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTAATACTACAAACTTACTACCCAGAGTATACACATTCCTAGCGATTTGTCATTCTCCAGGACACTaGTTAACAGCACAGCATGAC | + |
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Preference number: 4 (lower is better) Translates to: PSNTTNLLPRVYTFLAICHSPGH*LTAQHD Trigger: GTCATGCTGTGCTGTTAATCAGTGTCCTGGAGAATG...ACAAATCGCTAGGAATGTGTATACTCTGGGTAGTAAGTTTGTAGTATTAGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR GCA 90 bp | CCTTCTAATACTACAAACTTACTACCCAGAGTATACACATTCCTAGCGATTTGTATTTACTCTCCACTCTaGGCCCTTAAACCAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSNTTNLLPRVYTFLAICIYSPL*ALKPRL Trigger: CAGCCTTGGTTTAAGGGCGCAGAGTGGAGAGTAAAT...ACAAATCGCTAGGAATGTGTATACTCTGGGTAGTAAGTTTGTAGTATTAGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR CCA 90 bp | TTGTCCTTCATAAGGGATGGCCTCCCAACACTTAACTTCAGCTCTTCAAATACTCACTGCCCATTTCTATaGTTCCTTTATATGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSFIRDGLPTLNFSSSNTHCPFL*FLYMHK Trigger: CTTGTGCATATAAAGGAACCATAGAAATGGGCAGTG...AGTATTTGAAGAGCTGAAGTTAAGTGTTGGGAGGCCATCCCTTATGAAGGACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR CCA 90 bp | AAACTTACTACCCAGAGTATACACATTCCTAGCGATTTGTGGATCTTAACCCACCCCAGGAACAGAACTTaGTCTTTTACTTGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLTTQSIHIPSDLWILTHPRNRT*SFTCHS Trigger: TGAATGGCAAGTAAAAGACCAAGTTCTGTTCCTGGG...GTGGGTTAAGATCCACAAATCGCTAGGAATGTGTATACTCTGGGTAGTAAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR TCA 90 bp | AGAAACAGTAAACCAAAGGTAGACAAGTCCCTTCTGCTTTTTCCTATAAAACAGAAATCAAGTAGTGACTaGACTCACCTCTACGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNSKPKVDKSLLLFPIKQKSSSD*THLYEE Trigger: TTCCTCGTAGAGGTGAGTTCAGTCACTACTTGATTT...CTGTTTTATAGGAAAAAGCAGAAGGGACTTGTCTACCTTTGGTTTACTGTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586699.1 |
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| CDS-3UTR TCA 90 bp | AGAAACAGTAAACCAAAGGTAGACAAGTCCCTTCTGCTTTTTCCTATAAAACAGACTTTAAAACCCAACTaGGGTTTTGCTCAGCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RNSKPKVDKSLLLFPIKQTLKPN*GFAQPY Trigger: GTAAGGCTGAGCAAAACCTCAGTTGGGTTTTAAAGT...CTGTTTTATAGGAAAAAGCAGAAGGGACTTGTCTACCTTTGGTTTACTGTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000586699.1 |
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| CDS-3UTR CCA 90 bp | CCTTCTAATACTACAAACTTACTACCCAGAGTATACACATTCCTAGCGATTTGTCATAAAGGTTTTTCTTaGCCAAATTCAGGCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSNTTNLLPRVYTFLAICHKGFS*PNSGPL Trigger: CAACGGGCCTGAATTTGGCCAAGAAAAACCTTTATG...ACAAATCGCTAGGAATGTGTATACTCTGGGTAGTAAGTTTGTAGTATTAGAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| 3UTR CAA 72 bp | ACTCATGTCCTTACAAATACAGGAACAACCCAGCATTaGGCTTATTTTACAATGCATCTATATGCTATTCAA | + |
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Preference number: 4 (lower is better) Translates to: THVLTNTGTTQH*AYFTMHLYAIQ Trigger: TTGAATAGCATATAGATGCATTGTAAAATAAGCCAAATGCTGGGTTGTTCCTGTATTTGTAAGGACATGAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586699.1 |
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| CDS GCA 90 bp | CCCGCCCTCCCTGGGAAGCCGATCACATGTCGGGGGAGTCCGGGCTaGCAGGCGGTGCCCCACCCAGCTGATGCAACCCGCCGGAACCCG | + |
|
Preference number: 5 (lower is better) Translates to: PALPGKPITCRGSPG*QAVPHPADATRRNP Trigger: CGGGTTCCGGCGGGTTGCATCAGCTGGGTGGGGCACCGCCTGGCAGCCCGGACTCCCCCGACATGTGATCGGCTTCCCAGGGAGGGCGGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462917.1 |
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| CDS TCA 90 bp | GCCATTAGTAAATGCGCCACTGAGACGCCGGGCCCGCCCAAGGGCTaGCCTACCGCCTGCTCCTTCCGGTCGCGCTCAGGGTCCGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: AISKCATETPGPPKG*PTACSFRSRSGSDP Trigger: GGGGTCGGACCCTGAGCGCGACCGGAAGGAGCAGGCGGTAGGTCAGCCCTTGGGCGGGCCCGGCGTCTCAGTGGCGCATTTACTAATGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462917.1 |
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| CDS GCA 90 bp | CTTGGCAACTTCCCGGAACACGTCTCCGGGCCCGGAAGGCCCCGCTaGCCCACCCGGGCCCGCGACCTTTCCCATAGCTTACCGAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGNFPEHVSGPGRPR*PTRARDLSHSLPKE Trigger: CTCTTTCGGTAAGCTATGGGAAAGGTCGCGGGCCCGGGTGGGGCAGCGGGGCCTTCCGGGCCCGGAGACGTGTTCCGGGAAGTTGCCAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462917.1 ENST00000469308.1 |
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| CDS CCA 90 bp | CTGGTCAAGTTTCCCCTGCCCGAGCTTACGAAGGCCCGGAGCGCTTaGCAACTTCCCGGAACACGTCTCCGGGCCCGGAAGGCCCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVKFPLPELTKARSA*QLPGTRLRARKAPL Trigger: CAGCGGGGCCTTCCGGGCCCGGAGACGTGTTCCGGGAAGTTGCCAAGCGCTCCGGGCCTTCGTAAGCTCGGGCAGGGGAAACTTGACCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462917.1 ENST00000469308.1 |
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| CDS GCA 90 bp | CCAGGCCTTGATCCCGCTGCCCTGCGACCCTGGTCAAGTTTCCCCTaGCCGAGCTTACGAAGGCCCGGAGCGCTTGGCAACTTCCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGLDPAALRPWSSFP*PSLRRPGALGNFPE Trigger: TTCCGGGAAGTTGCCAAGCGCTCCGGGCCTTCGTAAGCTCGGGCAGGGGAAACTTGACCAGGGTCGCAGGGCAGCGGGATCAAGGCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462917.1 ENST00000469308.1 |
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| CDS-3UTR CAA 90 bp | AACCCACAGCATGAATGCCCTTGTTATAGCCCTTGCATTTACTCTCCACTCTGCAGACAGGCAGATCACTaGAGGCCAGGTGTTCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NPQHECPCYSPCIYSPLCRQADH*RPGVQD Trigger: GTCTTGAACACCTGGCCTCAAGTGATCTGCCTGTCT...GCAGAGTGGAGAGTAAATGCAAGGGCTATAACAAGGGCATTCATGCTGTGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR CAA 90 bp | TTGTCCTTCATAAGGGATGGCCTCCCAACACTTAACTTCAGCTCTTCAAATACTCCAAATTCAGGCCCGTaGAGAAGCTGTGGGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSFIRDGLPTLNFSSSNTPNSGP*RSCGCG Trigger: TCCACACCCACAGCTTCTCAACGGGCCTGAATTTGG...AGTATTTGAAGAGCTGAAGTTAAGTGTTGGGAGGCCATCCCTTATGAAGGACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR CAA 90 bp | CCAACTTTTATGTCCCCAGCAGAAGCTAACAGACAGGATCTGAGATTTGCCAGCAACCCAACTGAGGTTTaGCTCAGCCTTACAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PTFMSPAEANRQDLRFASNPTEV*LSLTKP Trigger: TGGCTTTGTAAGGCTGAGCAAAACCTCAGTTGGGTT...GCTGGCAAATCTCAGATCCTGTCTGTTAGCTTCTGCTGGGGACATAAAAGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586699.1 |
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| CDS-3UTR CAA 90 bp | AAACTTACTACCCAGAGTATACACATTCCTAGCGATTTGTGGATCTTAACCCACGGTAAGAGGGCCTCTTaGAGCTCTGTCCACCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KLTTQSIHIPSDLWILTHGKRAS*SSVHLV Trigger: GACTAGGTGGACAGAGCTCAAAGAGGCCCTCTTACC...GTGGGTTAAGATCCACAAATCGCTAGGAATGTGTATACTCTGGGTAGTAAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR CAA 90 bp | TCCCCAGCAGAAGCTAACAGACAGGATCTGAGATTTGCCAGCAGAGAGGCACAAGGAACAACCCAGCATTaGGCTTATTTTACAATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPAEANRQDLRFASREAQGTTQH*AYFTMH Trigger: ATGCATTGTAAAATAAGCCAAATGCTGGGTTGTTCC...TTGTGCCTCTCTGCTGGCAAATCTCAGATCCTGTCTGTTAGCTTCTGCTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586699.1 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCGATTTGTGGATCTTAACCCACAGCATGAATGCCCTTGTTATAGCCCACATTCCTAGCGATTaGTGGATCTTAACCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPSDLWILTHSMNALVIAHIPSD*WILTHS Trigger: GCTGTGGGTTAAGATCCACAAATCGCTAGGAATGTG...GGCTATAACAAGGGCATTCATGCTGTGGGTTAAGATCCACAAATCGCTAGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR CAA 90 bp | TGTTATAGCCCTTGCATTTACTCTCCACTCTGCGCCCTTAAACCAAGGCTGTTAACCCAGGAACAGAACTaGGTCTTTTACTTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: CYSPCIYSPLCALKPRLLTQEQN*VFYLPF Trigger: GAATGGCAAGTAAAAGACCAAGTTCTGTTCCTGGGT...TAACAGCCTTGGTTTAAGGGCGCAGAGTGGAGAGTAAATGCAAGGGCTATAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS-3UTR CAA 90 bp | GAAGCTGTGGGTGTGGACGAATCCTCCACTGCCCATTTCTATGGTTCCTTTATAAGTATTATAATCTTATaGTGTAGCACGGCTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EAVGVDESSTAHFYGSFISIIIL*CSTAVR Trigger: CCTCACAGCCGTGCTACACAATAAGATTATAATACT...TATAAAGGAACCATAGAAATGGGCAGTGGAGGATTCGTCCACACCCACAGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS TCA 90 bp | ACTTCTGCAAGCACAAAGGAAAACGAATTAGGCCTAGCAAGAGCATaGACGCATTTATCACCCCTTCCGCTAACAATACATACAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: TSASTKENELGLARA*THLSPLPLTIHTTQ Trigger: CTGTGTTGTATGTATTGTTAGCGGAAGGGGTGATAAATGCGTTCATGCTCTTGCTAGGCCTAATTCGTTTTCCTTTGTGCTTGCAGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462917.1 ENST00000482111.1 |
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| CDS-3UTR CAA 90 bp | CCTTCTAATACTACAAACTTACTACCCAGAGTATACACATTCCTAGCGATTTGTTGCTTGCAAAAACAGTaGACCTGCTGGGCATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSNTTNLLPRVYTFLAICCLQKQ*TCWAWW Trigger: CCACCATGCCCAGCAGGTCAACTGTTTTTGCAAGCA...ACAAATCGCTAGGAATGTGTATACTCTGGGTAGTAAGTTTGTAGTATTAGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469257.2 |
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| CDS TCA 72 bp | GGGGAGTCCGGGCTGCCAGGCGGTGCCCCACCCAGCTaGTGCAACCCGCCGGAACCCGAGCTCCCGAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GESGLPGGAPPS*CNPPEPELPRR Trigger: CCGCCTCGGGAGCTCGGGTTCCGGCGGGTTGCATCAGCTGGGTGGGGCACCGCCTGGCAGCCCGGACTCCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462917.1 |
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| CDS TCA 72 bp | GGTCGCGCTCAGGGTCCGACCCCGGGGCCCAGGCCTTaGTCCCGCTGCCCTGCGACCCTGGTCAAGTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRAQGPTPGPRP*SRCPATLVKFP Trigger: GGGAAACTTGACCAGGGTCGCAGGGCAGCGGGATCAAGGCCTGGGCCCCGGGGTCGGACCCTGAGCGCGACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462917.1 ENST00000469308.1 |
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| CDS TCA 72 bp | AAATGCGCCACTGAGACGCCGGGCCCGCCCAAGGGCTaGCCTACCGCCTGCTCCTTCCGGTCGCGCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: KCATETPGPPKG*PTACSFRSRSG Trigger: CCCTGAGCGCGACCGGAAGGAGCAGGCGGTAGGTCAGCCCTTGGGCGGGCCCGGCGTCTCAGTGGCGCATTT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462917.1 |
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| CDS GCA 72 bp | TTCCCGGAACACGTCTCCGGGCCCGGAAGGCCCCGCTaGCCCACCCGGGCCCGCGACCTTTCCCATAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FPEHVSGPGRPR*PTRARDLSHSL Trigger: TAAGCTATGGGAAAGGTCGCGGGCCCGGGTGGGGCAGCGGGGCCTTCCGGGCCCGGAGACGTGTTCCGGGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462917.1 ENST00000469308.1 |
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| CDS GCA 72 bp | CCTGGGAAGCCGATCACATGTCGGGGGAGTCCGGGCTaGCAGGCGGTGCCCCACCCAGCTGATGCAACCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PGKPITCRGSPG*QAVPHPADATR Trigger: GCGGGTTGCATCAGCTGGGTGGGGCACCGCCTGGCAGCCCGGACTCCCCCGACATGTGATCGGCTTCCCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462917.1 |
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| CDS CCA 72 bp | CGGGGCCCAGGCCTTGATCCCGCTGCCCTGCGACCCTaGTCAAGTTTCCCCTGCCCGAGCTTACGAAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RGPGLDPAALRP*SSFPCPSLRRP Trigger: GGGCCTTCGTAAGCTCGGGCAGGGGAAACTTGACCAGGGTCGCAGGGCAGCGGGATCAAGGCCTGGGCCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462917.1 ENST00000469308.1 |
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| CDS CAA 90 bp | CCTGGTCAAGTTTCCCCTGCCCGAGCTTACGAAGGCCCGGAGCGCTaGGCAACTTCCCGGAACACGTCTCCGGGCCCGGAAGGCCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGQVSPARAYEGPER*ATSRNTSPGPEGPA Trigger: AGCGGGGCCTTCCGGGCCCGGAGACGTGTTCCGGGAAGTTGCCAAGCGCTCCGGGCCTTCGTAAGCTCGGGCAGGGGAAACTTGACCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462917.1 ENST00000469308.1 |
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| CDS GCA 72 bp | GATCCCGCTGCCCTGCGACCCTGGTCAAGTTTCCCCTaGCCGAGCTTACGAAGGCCCGGAGCGCTTGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: DPAALRPWSSFP*PSLRRPGALGN Trigger: GTTGCCAAGCGCTCCGGGCCTTCGTAAGCTCGGGCAGGGGAAACTTGACCAGGGTCGCAGGGCAGCGGGATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462917.1 ENST00000469308.1 |
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| CDS GCA 72 bp | GGGGCTAAGCCTCCCACCCCCATTGGTGCACCCGCTTaGCACTTAGGGCTGGCACCGCCTTTCCCTCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GAKPPTPIGAPA*HLGLAPPFPPD Trigger: ATCCGGAGGGAAAGGCGGTGCCAGCCCTAAGTGGCAAGCGGGTGCACCAATGGGGGTGGGAGGCTTAGCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462917.1 |
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| CDS CCA 72 bp | TTTCCCCTGCCCGAGCTTACGAAGGCCCGGAGCGCTTaGCAACTTCCCGGAACACGTCTCCGGGCCCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FPLPELTKARSA*QLPGTRLRARK Trigger: CTTCCGGGCCCGGAGACGTGTTCCGGGAAGTTGCCAAGCGCTCCGGGCCTTCGTAAGCTCGGGCAGGGGAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462917.1 ENST00000469308.1 |
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| CDS CAA 72 bp | GTTTCCCCTGCCCGAGCTTACGAAGGCCCGGAGCGCTaGGCAACTTCCCGGAACACGTCTCCGGGCCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VSPARAYEGPER*ATSRNTSPGPE Trigger: TTCCGGGCCCGGAGACGTGTTCCGGGAAGTTGCCAAGCGCTCCGGGCCTTCGTAAGCTCGGGCAGGGGAAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462917.1 ENST00000469308.1 |
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| CDS TCA 72 bp | CACCGCCTTTCCCTCCGGATCCGTGACAACGGGTGGTaGCGTAACGGACGTGACGCAATGGTGACGGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HRLSLRIRDNGW*RNGRDAMVTGG Trigger: CCCTCCCGTCACCATTGCGTCACGTCCGTTACGTCACCACCCGTTGTCACGGATCCGGAGGGAAAGGCGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462917.1 |
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| CDS TCA 72 bp | AGCACAAAGGAAAACGAATTAGGCCTAGCAAGAGCATaGACGCATTTATCACCCCTTCCGCTAACAATACAT | + |
|
Preference number: 6 (lower is better) Translates to: STKENELGLARA*THLSPLPLTIH Trigger: ATGTATTGTTAGCGGAAGGGGTGATAAATGCGTTCATGCTCTTGCTAGGCCTAATTCGTTTTCCTTTGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462917.1 ENST00000482111.1 |
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