Pregenerated sensors for EID1 (Homo sapiens)
Ensembl gene IDs: ENSG00000255302Ensembl transcript IDs: ENST00000530028.3, ENST00000560490.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCAACATACTCATaGATAGGGCAGGTTTTCCCAGACCAGCAAATTCTTATAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LELQHLSKVTTATYS*IGQVFPDQQILIGK Trigger: TTTGCCTATAAGAATTTGCTGGTCTGGGAAAACCTGCCCTATCAATGAGTATGTTGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| 3UTR-3UTR CCA 90 bp | GATGTAATCATTACTCTCCTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCAAAGATAGCGGAAAGTTaGGTCCCTCCTCAAGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: DVIITLLELQHLSKVTTAKIAES*VPPQVV Trigger: AACTACTTGAGGAGGGACCCAACTTTCCGCTATCTT...TGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAGGAGAGTAATGATTACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| 3UTR-3UTR CAA 90 bp | GATGTAATCATTACTCTCCTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCAGCAGTCACTGTCCTATaGTGTTCTATTCTGAAAAAC | + |
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Preference number: 3 (lower is better) Translates to: DVIITLLELQHLSKVTTAAVTVL*CSILKN Trigger: GTTTTTCAGAATAGAACACAATAGGACAGTGACTGC...TGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAGGAGAGTAATGATTACATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR GCA 90 bp | GGCACAAAACTATTTGGAATGAACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCGCCACCTGGCCTGGCTaGTCCCCAGCGTTGGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GTKLFGMNPKDSGKLGPSATWPG*SPALGP Trigger: CGGGCCCAACGCTGGGGAGCAGCCAGGCCAGGTGGC...GGAGGGACCCAACTTTCCGCTATCTTTTGGGTTCATTCCAAATAGTTTTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CCA 90 bp | AACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTCAAGTAGTTTCCTCCTCTTTGCCCGCCACCTGGCCTaGCTGCTCCCCAGCGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: NPKDSGKLGPSSSSFLLFARHLA*LLPSVG Trigger: CCCAACGCTGGGGAGCAGCCAGGCCAGGTGGCGGGC...AAAGAGGAGGAAACTACTTGAGGAGGGACCCAACTTTCCGCTATCTTTTGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR GCA 90 bp | GGCACAAAACTATTTGGAATGAACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCGCTGTTGGGCCCCGCTaGGGGAGGGACGCAGGGATA | + |
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Preference number: 4 (lower is better) Translates to: GTKLFGMNPKDSGKLGPSAVGPR*GRDAGI Trigger: TATCCCTGCGTCCCTCCCGCAGCGGGGCCCAACAGC...GGAGGGACCCAACTTTCCGCTATCTTTTGGGTTCATTCCAAATAGTTTTGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR GCA 90 bp | AACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTCAAGTAGTTTCCTCCTCTTTCTCGCTCTCGAAGTCTaGGCCCGCCACCTGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NPKDSGKLGPSSSSFLLFLALEV*ARHLAW Trigger: CCAGGCCAGGTGGCGGGCGCAGACTTCGAGAGCGAG...AAAGAGGAGGAAACTACTTGAGGAGGGACCCAACTTTCCGCTATCTTTTGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR GCA 90 bp | GGCACAAAACTATTTGGAATGAACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCGCTCCCGGCTCCCGCTaGCTACCTCCATCTGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: GTKLFGMNPKDSGKLGPSAPGSR*LPPSAE Trigger: TTCCGCAGATGGAGGTAGGCAGCGGGAGCCGGGAGC...GGAGGGACCCAACTTTCCGCTATCTTTTGGGTTCATTCCAAATAGTTTTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CCA 90 bp | GATGTAATCATTACTCTCCTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCATCTGCGCCCGCCACCTaGCCTGGCTGCTCCCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: DVIITLLELQHLSKVTTASAPAT*PGCSPA Trigger: CGCTGGGGAGCAGCCAGGCCAGGTGGCGGGCGCAGA...TGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAGGAGAGTAATGATTACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR TCA 90 bp | AACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTCAAGTAGTTTCCTCCTCTTTTGTAGCCGGCACCACTaGGCTGCTCCTCTTCGGGAT | + |
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Preference number: 4 (lower is better) Translates to: NPKDSGKLGPSSSSFLLFCSRHH*AAPLRD Trigger: ATCCCGAAGAGGAGCAGCTCAGTGGTGCCGGCTACA...AAAGAGGAGGAAACTACTTGAGGAGGGACCCAACTTTCCGCTATCTTTTGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR GCA 90 bp | AACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTCAAGTAGTTTCCTCCTCTTTCTGCCTACCTCCATCTaGGGAAGGTCACCCTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: NPKDSGKLGPSSSSFLLFLPTSI*GRSPSP Trigger: TGGCGAGGGTGACCTTCCGCAGATGGAGGTAGGCAG...AAAGAGGAGGAAACTACTTGAGGAGGGACCCAACTTTCCGCTATCTTTTGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CCA 90 bp | GATGTAATCATTACTCTCCTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCATCCTCCTCGAGCTGTTaGGCCCCGCTGCGGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: DVIITLLELQHLSKVTTASSSSC*APLREG Trigger: TCCCTCCCGCAGCGGGGCCCAACAGCTCGAGGAGGA...TGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAGGAGAGTAATGATTACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CCA 90 bp | GGCACAAAACTATTTGGAATGAACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCCTCCTCCTCCTCCATTaGGCCTTCCTCCTCGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GTKLFGMNPKDSGKLGPSLLLLH*AFLLEL Trigger: CAGCTCGAGGAGGAAGGCCCAATGGAGGAGGAGGAG...GGAGGGACCCAACTTTCCGCTATCTTTTGGGTTCATTCCAAATAGTTTTGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CCA 90 bp | GATGTAATCATTACTCTCCTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCACTCTGGCGCCGCCATTaGCTGGGCCTCCTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: DVIITLLELQHLSKVTTALWRRH*LGLLLL Trigger: GAGGAGGAGGAGGCCCAGCCAATGGCGGCGCCAGAG...TGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAGGAGAGTAATGATTACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CCA 90 bp | GATGTAATCATTACTCTCCTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCAGCTCCGTTTCCCCTCTaGCGCCGCCATTGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: DVIITLLELQHLSKVTTAAPFPL*RRHWLG Trigger: GCCCAGCCAATGGCGGCGCCAGAGGGGAAACGGAGC...TGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAGGAGAGTAATGATTACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR TCA 90 bp | AACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTCAAGTAGTTTCCTCCTCTTTTTCTTCAAGAGCGGCTaGTACTCTGTAGCCGGCACC | + |
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Preference number: 4 (lower is better) Translates to: NPKDSGKLGPSSSSFLLFFFKSG*YSVAGT Trigger: GGTGCCGGCTACAGAGTATCAGCCGCTCTTGAAGAA...AAAGAGGAGGAAACTACTTGAGGAGGGACCCAACTTTCCGCTATCTTTTGGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR GCA 90 bp | GGCACAAAACTATTTGGAATGAACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCGGCATCACATCCATCTaGAGGTCACTGCTCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GTKLFGMNPKDSGKLGPSGITSI*RSLLSS Trigger: TGAAGAGAGCAGTGACCTGCAGATGGATGTGATGCC...GGAGGGACCCAACTTTCCGCTATCTTTTGGGTTCATTCCAAATAGTTTTGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR GCA 90 bp | GATGTAATCATTACTCTCCTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCACCATCTGCAGGTCACTaGTCTCTTCATACAGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: DVIITLLELQHLSKVTTAPSAGH*SLHTAR Trigger: CCGAGCTGTATGAAGAGAGCAGTGACCTGCAGATGG...TGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAGGAGAGTAATGATTACATC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CCA 90 bp | AACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTCAAGTAGTTTCCTCCTCTTTAAGATAGCGGAAAGTTaGGTCCCTCCTCAAGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: NPKDSGKLGPSSSSFLLFKIAES*VPPQVV Trigger: AACTACTTGAGGAGGGACCCAACTTTCCGCTATCTT...AAAGAGGAGGAAACTACTTGAGGAGGGACCCAACTTTCCGCTATCTTTTGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR TCA 90 bp | AACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTCAAGTAGTTTCCTCCTCTTTTCGATAAAAGCTAACTaGTCAAACGGGGTCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: NPKDSGKLGPSSSSFLLFSIKAN*SNGVFS Trigger: TGAGAAGACCCCGTTTGATCAGTTAGCTTTTATCGA...AAAGAGGAGGAAACTACTTGAGGAGGGACCCAACTTTCCGCTATCTTTTGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR GCA 90 bp | GGCACAAAACTATTTGGAATGAACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCCCTTTTTCACAACTGTaGAGTCACTGTCCTATTGTG | + |
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Preference number: 4 (lower is better) Translates to: GTKLFGMNPKDSGKLGPSPFSQL*SHCPIV Trigger: CACAATAGGACAGTGACTGCACAGTTGTGAAAAAGG...GGAGGGACCCAACTTTCCGCTATCTTTTGGGTTCATTCCAAATAGTTTTGTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| 3UTR CAA 72 bp | CAGCATCTTAGTAAGGTAACCACGGCAACATACTCATaGATAGGGCAGGTTTTCCCAGACCAGCAAATTCTT | + |
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Preference number: 4 (lower is better) Translates to: QHLSKVTTATYS*IGQVFPDQQIL Trigger: AAGAATTTGCTGGTCTGGGAAAACCTGCCCTATCAATGAGTATGTTGCCGTGGTTACCTTACTAAGATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR TCA 90 bp | AACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTCAAGTAGTTTCCTCCTCTTTTGTGAATTAGATAGCTaGAGCTGGATCATTTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: NPKDSGKLGPSSSSFLLFCELDS*SWIIFP Trigger: AGGGAAAATGATCCAGCTTCAGCTATCTAATTCACA...AAAGAGGAGGAAACTACTTGAGGAGGGACCCAACTTTCCGCTATCTTTTGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR TCA 90 bp | GATGTAATCATTACTCTCCTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCACTGAACCTAGCCTTCTaGTGTAATCATTACTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: DVIITLLELQHLSKVTTALNLAF*CNHYSP Trigger: AGGAGAGTAATGATTACATCAGAAGGCTAGGTTCAG...TGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAGGAGAGTAATGATTACATC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CCA 90 bp | GGCACAAAACTATTTGGAATGAACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTACCAAGGTAATTTCTaGGCAGGTTTAAAACCTTTA | + |
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Preference number: 4 (lower is better) Translates to: GTKLFGMNPKDSGKLGPSYQGNF*AGLKPL Trigger: TAAAGGTTTTAAACCTGCCCAGAAATTACCTTGGTA...GGAGGGACCCAACTTTCCGCTATCTTTTGGGTTCATTCCAAATAGTTTTGTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR TCA 90 bp | GATGTAATCATTACTCTCCTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCATCCAATGCTGGTGCATaGCAAATAACAAGCTTAATT | + |
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Preference number: 4 (lower is better) Translates to: DVIITLLELQHLSKVTTASNAGA*QITSLI Trigger: AATTAAGCTTGTTATTTGTCATGCACCAGCATTGGA...TGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAGGAGAGTAATGATTACATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS GCA 90 bp | CCTCCTCCTCCATTGGGCCTTCCTCCTCGAGCTGTTGGGCCCCGCTaGGGGAGGGACGCAGGGATAGCTCCCGGCTCCCGCTGCCTACCT | + |
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Preference number: 5 (lower is better) Translates to: PPPPLGLPPRAVGPR*GRDAGIAPGSRCLP Trigger: AGGTAGGCAGCGGGAGCCGGGAGCTATCCCTGCGTCCCTCCCGCAGCGGGGCCCAACAGCTCGAGGAGGAAGGCCCAATGGAGGAGGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS GCA 90 bp | CCCTCGTCCTCGCTCTCGAAGTCTGCGCCCGCCACCTGGCCTGGCTaGTCCCCAGCGTTGGGCCCGTTAGCAAGGCTCCGTTTCCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: PSSSLSKSAPATWPG*SPALGPLARLRFPS Trigger: AGAGGGGAAACGGAGCCTTGCTAACGGGCCCAACGCTGGGGAGCAGCCAGGCCAGGTGGCGGGCGCAGACTTCGAGAGCGAGGACGAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS CCA 90 bp | AATTCCTCGCCCTCGTCCTCGCTCTCGAAGTCTGCGCCCGCCACCTaGCCTGGCTGCTCCCCAGCGTTGGGCCCGTTAGCAAGGCTCCGT | + |
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Preference number: 5 (lower is better) Translates to: NSSPSSSLSKSAPAT*PGCSPALGPLARLR Trigger: ACGGAGCCTTGCTAACGGGCCCAACGCTGGGGAGCAGCCAGGCCAGGTGGCGGGCGCAGACTTCGAGAGCGAGGACGAGGGCGAGGAATT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS GCA 90 bp | GAGGGACGCAGGGATAGCTCCCGGCTCCCGCTGCCTACCTCCATCTaGGGAAGGTCACCCTCGCCAGGCATCACATCCATCTGCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: EGRRDSSRLPLPTSI*GRSPSPGITSICRS Trigger: TGACCTGCAGATGGATGTGATGCCTGGCGAGGGTGACCTTCCGCAGATGGAGGTAGGCAGCGGGAGCCGGGAGCTATCCCTGCGTCCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS TCA 90 bp | TGTCGGCTTCTTCAAGAGCGGCTGATACTCTGTAGCCGGCACCACTaGGCTGCTCCTCTTCGGGATAGTCGTAGTCGTCCTCCCAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: CRLLQERLILCSRHH*AAPLRDSRSRPPSH Trigger: ATGACTGGGAGGACGACTACGACTATCCCGAAGAGGAGCAGCTCAGTGGTGCCGGCTACAGAGTATCAGCCGCTCTTGAAGAAGCCGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS-3UTR CAA 90 bp | GGCACAAAACTATTTGGAATGAACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTTCCTCCTCGAGCTGTaGGGCCCCGCTGCGGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GTKLFGMNPKDSGKLGPSFLLEL*GPAAGG Trigger: CCCTCCCGCAGCGGGGCCCAACAGCTCGAGGAGGAA...GGAGGGACCCAACTTTCCGCTATCTTTTGGGTTCATTCCAAATAGTTTTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS GCA 90 bp | GCGGAAGGTCACCCTCGCCAGGCATCACATCCATCTGCAGGTCACTaGTCTCTTCATACAGCTCGGACAACTCAGCCATTTCCGACATTG | + |
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Preference number: 5 (lower is better) Translates to: AEGHPRQASHPSAGH*SLHTARTTQPFPTL Trigger: CAATGTCGGAAATGGCTGAGTTGTCCGAGCTGTATGAAGAGAGCAGTGACCTGCAGATGGATGTGATGCCTGGCGAGGGTGACCTTCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS GCA 90 bp | ACCTCCATCTGCGGAAGGTCACCCTCGCCAGGCATCACATCCATCTaGAGGTCACTGCTCTCTTCATACAGCTCGGACAACTCAGCCATT | + |
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Preference number: 5 (lower is better) Translates to: TSICGRSPSPGITSI*RSLLSSYSSDNSAI Trigger: AATGGCTGAGTTGTCCGAGCTGTATGAAGAGAGCAGTGACCTGCAGATGGATGTGATGCCTGGCGAGGGTGACCTTCCGCAGATGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS GCA 90 bp | TCCTCCATCTGCGGAAGGTCACCCTCGCCAGGCATCACATCCATCTaGAGGTCACTGCTCTCTTCATACAGCTCGGACAACTCAGCCATT | + |
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Preference number: 5 (lower is better) Translates to: SSICGRSPSPGITSI*RSLLSSYSSDNSAI Trigger: AATGGCTGAGTTGTCCGAGCTGTATGAAGAGAGCAGTGACCTGCAGATGGATGTGATGCCTGGCGAGGGTGACCTTCCGCAGATGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560490.1 |
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| CDS-3UTR CAA 90 bp | GGCACAAAACTATTTGGAATGAACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCGGCTGCTCCCCAGCGTaGGGCCCGTTAGCAAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GTKLFGMNPKDSGKLGPSGCSPA*GPLARL Trigger: GAGCCTTGCTAACGGGCCCAACGCTGGGGAGCAGCC...GGAGGGACCCAACTTTCCGCTATCTTTTGGGTTCATTCCAAATAGTTTTGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CAA 90 bp | AACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTCAAGTAGTTTCCTCCTCTTTCCTCCTCCTCCTCCATaGGGCCTTCCTCCTCGAGCT | + |
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Preference number: 5 (lower is better) Translates to: NPKDSGKLGPSSSSFLLFPPPPP*GLPPRA Trigger: AGCTCGAGGAGGAAGGCCCAATGGAGGAGGAGGAGG...AAAGAGGAGGAAACTACTTGAGGAGGGACCCAACTTTCCGCTATCTTTTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CAA 90 bp | GATGTAATCATTACTCTCCTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCACCTCTGGCGCCGCCATaGGCTGGGCCTCCTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: DVIITLLELQHLSKVTTAPLAPP*AGPPPP Trigger: AGGAGGAGGAGGCCCAGCCAATGGCGGCGCCAGAGG...TGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAGGAGAGTAATGATTACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS TCA 90 bp | TTCTCTTGTTCTCAGAAACATCTTGTCGGCTTCTTCAAGAGCGGCTaGTACTCTGTAGCCGGCACCACTGAGCTGCTCCTCTTCGGGATA | + |
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Preference number: 5 (lower is better) Translates to: FSCSQKHLVGFFKSG*YSVAGTTELLLFGI Trigger: TATCCCGAAGAGGAGCAGCTCAGTGGTGCCGGCTACAGAGTATCAGCCGCTCTTGAAGAAGCCGACAAGATGTTTCTGAGAACAAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS CCA 90 bp | AAACGGGGTCTTCTCATAATGCATCTGAAACCCGCCATCCAGGGCTaGTTCTCTTGTTCTCAGAAACATCTTGTCGGCTTCTTCAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: KRGLLIMHLKPAIQG*FSCSQKHLVGFFKS Trigger: GCTCTTGAAGAAGCCGACAAGATGTTTCTGAGAACAAGAGAACCAGCCCTGGATGGCGGGTTTCAGATGCATTATGAGAAGACCCCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS-3UTR CAA 90 bp | AACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTCAAGTAGTTTCCTCCTCTTTAAAGATAGCGGAAAGTaGGGTCCCTCCTCAAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: NPKDSGKLGPSSSSFLLFKDSGK*GPSSSS Trigger: ACTACTTGAGGAGGGACCCAACTTTCCGCTATCTTT...AAAGAGGAGGAAACTACTTGAGGAGGGACCCAACTTTCCGCTATCTTTTGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CAA 90 bp | GGCACAAAACTATTTGGAATGAACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCACGGCAACATACTCATaGATAGGGCAGGTTTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: GTKLFGMNPKDSGKLGPSTATYS*IGQVFP Trigger: TGGGAAAACCTGCCCTATCAATGAGTATGTTGCCGT...GGAGGGACCCAACTTTCCGCTATCTTTTGGGTTCATTCCAAATAGTTTTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CAA 90 bp | GATGTAATCATTACTCTCCTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCACAGCCATTTCCGACATaGTGCAAACCGCTCAACCTC | + |
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Preference number: 5 (lower is better) Translates to: DVIITLLELQHLSKVTTAQPFPT*CKPLNL Trigger: GAGGTTGAGCGGTTTGCACAATGTCGGAAATGGCTG...TGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAGGAGAGTAATGATTACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CAA 90 bp | GGCACAAAACTATTTGGAATGAACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCCAGTGGGCTTTTGTATaGGCAGTTTGTCTTGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: GTKLFGMNPKDSGKLGPSQWAFV*AVCLGH Trigger: ATGACCAAGACAAACTGCCAATACAAAAGCCCACTG...GGAGGGACCCAACTTTCCGCTATCTTTTGGGTTCATTCCAAATAGTTTTGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CAA 90 bp | AACCCAAAAGATAGCGGAAAGTTGGGTCCCTCCTCAAGTAGTTTCCTCCTCTTTAGTATCAGTGGGCTTTaGTATTGGCAGTTTGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: NPKDSGKLGPSSSSFLLFSISGL*YWQFVL Trigger: CAAGACAAACTGCCAATACAAAAGCCCACTGATACT...AAAGAGGAGGAAACTACTTGAGGAGGGACCCAACTTTCCGCTATCTTTTGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS-3UTR CAA 90 bp | GATGTAATCATTACTCTCCTAGAACTTCAGCATCTTAGTAAGGTAACCACGGCATCTTCGGTCAGACGATaGACAACCATCAGTGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: DVIITLLELQHLSKVTTASSVRR*TTISEK Trigger: TTTTTCACTGATGGTTGTCAATCGTCTGACCGAAGA...TGCCGTGGTTACCTTACTAAGATGCTGAAGTTCTAGGAGAGTAATGATTACATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS GCA 72 bp | CCATTGGGCCTTCCTCCTCGAGCTGTTGGGCCCCGCTaGGGGAGGGACGCAGGGATAGCTCCCGGCTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: PLGLPPRAVGPR*GRDAGIAPGSR Trigger: GCGGGAGCCGGGAGCTATCCCTGCGTCCCTCCCGCAGCGGGGCCCAACAGCTCGAGGAGGAAGGCCCAATGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS CAA 90 bp | CTCTCGAAGTCTGCGCCCGCCACCTGGCCTGGCTGCTCCCCAGCGTaGGGCCCGTTAGCAAGGCTCCGTTTCCCCTCTGGCGCCGCCATT | + |
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Preference number: 6 (lower is better) Translates to: LSKSAPATWPGCSPA*GPLARLRFPSGAAI Trigger: AATGGCGGCGCCAGAGGGGAAACGGAGCCTTGCTAACGGGCCCAACGCTGGGGAGCAGCCAGGCCAGGTGGCGGGCGCAGACTTCGAGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS GCA 72 bp | TGCGGGAGGGACGCAGGGATAGCTCCCGGCTCCCGCTaGCTACCTCCATCTGCGGAAGGTCACCCTCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: CGRDAGIAPGSR*LPPSAEGHPRQ Trigger: CTGGCGAGGGTGACCTTCCGCAGATGGAGGTAGGCAGCGGGAGCCGGGAGCTATCCCTGCGTCCCTCCCGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS GCA 72 bp | TCGCTCTCGAAGTCTGCGCCCGCCACCTGGCCTGGCTaGTCCCCAGCGTTGGGCCCGTTAGCAAGGCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: SLSKSAPATWPG*SPALGPLARLR Trigger: ACGGAGCCTTGCTAACGGGCCCAACGCTGGGGAGCAGCCAGGCCAGGTGGCGGGCGCAGACTTCGAGAGCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS GCA 72 bp | AGGGATAGCTCCCGGCTCCCGCTGCCTACCTCCATCTaGGGAAGGTCACCCTCGCCAGGCATCACATCCATC | + |
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Preference number: 6 (lower is better) Translates to: RDSSRLPLPTSI*GRSPSPGITSI Trigger: GATGGATGTGATGCCTGGCGAGGGTGACCTTCCGCAGATGGAGGTAGGCAGCGGGAGCCGGGAGCTATCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530028.3 |
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| CDS TCA 72 bp | CTTCAAGAGCGGCTGATACTCTGTAGCCGGCACCACTaGGCTGCTCCTCTTCGGGATAGTCGTAGTCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LQERLILCSRHH*AAPLRDSRSRP Trigger: AGGACGACTACGACTATCCCGAAGAGGAGCAGCTCAGTGGTGCCGGCTACAGAGTATCAGCCGCTCTTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS GCA 72 bp | TGCGGAAGGTCACCCTCGCCAGGCATCACATCCATCTaGAGGTCACTGCTCTCTTCATACAGCTCGGACAAC | + |
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Preference number: 6 (lower is better) Translates to: CGRSPSPGITSI*RSLLSSYSSDN Trigger: GTTGTCCGAGCTGTATGAAGAGAGCAGTGACCTGCAGATGGATGTGATGCCTGGCGAGGGTGACCTTCCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS TCA 72 bp | TCTCAGAAACATCTTGTCGGCTTCTTCAAGAGCGGCTaGTACTCTGTAGCCGGCACCACTGAGCTGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SQKHLVGFFKSG*YSVAGTTELLL Trigger: GAGGAGCAGCTCAGTGGTGCCGGCTACAGAGTATCAGCCGCTCTTGAAGAAGCCGACAAGATGTTTCTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS GCA 72 bp | CACCCTCGCCAGGCATCACATCCATCTGCAGGTCACTaGTCTCTTCATACAGCTCGGACAACTCAGCCATTT | + |
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Preference number: 6 (lower is better) Translates to: HPRQASHPSAGH*SLHTARTTQPF Trigger: AAATGGCTGAGTTGTCCGAGCTGTATGAAGAGAGCAGTGACCTGCAGATGGATGTGATGCCTGGCGAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS CCA 72 bp | CTTCTCATAATGCATCTGAAACCCGCCATCCAGGGCTaGTTCTCTTGTTCTCAGAAACATCTTGTCGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LLIMHLKPAIQG*FSCSQKHLVGF Trigger: GAAGCCGACAAGATGTTTCTGAGAACAAGAGAACCAGCCCTGGATGGCGGGTTTCAGATGCATTATGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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| CDS CAA 90 bp | TCTTCTCATAATGCATCTGAAACCCGCCATCCAGGGCTGGTTCTCTaGTTCTCAGAAACATCTTGTCGGCTTCTTCAAGAGCGGCTGATA | + |
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Preference number: 6 (lower is better) Translates to: SSHNASETRHPGLVL*FSETSCRLLQERLI Trigger: TATCAGCCGCTCTTGAAGAAGCCGACAAGATGTTTCTGAGAACAAGAGAACCAGCCCTGGATGGCGGGTTTCAGATGCATTATGAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530028.3 ENST00000560490.1 |
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