RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EHF (Homo sapiens)

Ensembl gene IDs: ENSG00000135373

Ensembl transcript IDs: ENST00000257831.8, ENST00000450654.6, ENST00000525253.5, ENST00000527001.5, ENST00000527935.1, ENST00000529161.1, ENST00000529527.5, ENST00000530286.5, ENST00000531728.5, ENST00000531794.5, ENST00000532302.1, ENST00000533754.5

Found 458 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATaGCACATTCAAGAAACTGTTGCTTATGCCCCTGGGAGCCAGAGC +
Preference number: 1 (lower is better)
Translates to: NVFKGKLTTWVSLLR*HIQETVAYAPGSQS
Trigger: GCTCTGGCTCCCAGGGGCATAAGCAACAGTTTCTTGAATGTGCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR TCA 90 bp GGGGTTTCTGGTGTCAAGTGGTTAGAGACCATGAGTGGATACTGCTaGACATCTTACAATGCACAGGAAAGCCCTCACCACAAAGAACAC +
Preference number: 1 (lower is better)
Translates to: GVSGVKWLETMSGYC*TSYNAQESPHHKEH
Trigger: GTGTTCTTTGTGGTGAGGGCTTTCCTGTGCATTGTAAGATGTTCAGCAGTATCCACTCATGGTCTCTAACCACTTGACACCAGAAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR GCA 90 bp GAGCCATGTGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGACTTTaGTCTCCCTTTCAACACTGTGGTGGGAAGTACTCTGTTACCACC +
Preference number: 1 (lower is better)
Translates to: EPCVPKRKEGLSIRL*SPFQHCGGKYSVTT
Trigger: GGTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCAAAGTCTTATGGATAAACCCTCCTTTCTTTTGGGGACACATGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR GCA 90 bp CTGGGTCTCCCTTCTCAGATGGCACATTCAAGAAACTGTTGCTTATaGCCCTGGGAGCCAGAGCCTTACTTAAGTCTTACCAAGTCAAAT +
Preference number: 1 (lower is better)
Translates to: LGLPSQMAHSRNCCL*PWEPEPYLSLTKSN
Trigger: ATTTGACTTGGTAAGACTTAAGTAAGGCTCTGGCTCCCAGGGGCATAAGCAACAGTTTCTTGAATGTGCCATCTGAGAAGGGAGACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CCA 90 bp AAACTTCCCGGCATCCATCCACTTTGTCCTAACCATCTGAGACCCTaGAATTTAACTCAGCAACAATGTTCACCTCCCTTGACGAAGCCA +
Preference number: 1 (lower is better)
Translates to: KLPGIHPLCPNHLRP*NLTQQQCSPPLTKP
Trigger: TGGCTTCGTCAAGGGAGGTGAACATTGTTGCTGAGTTAAATTCCAGGGTCTCAGATGGTTAGGACAAAGTGGATGGATGCCGGGAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CCA 90 bp CCCTTTCAACACTGTGGTGGGAAGTACTCTGTTACCACCCCAAGTTaGCATAGCTCGATTACTTTAAGTTCTCCAAGTCACGAACAGCAC +
Preference number: 1 (lower is better)
Translates to: PFQHCGGKYSVTTPS*HSSITLSSPSHEQH
Trigger: GTGCTGTTCGTGACTTGGAGAACTTAAAGTAATCGAGCTATGCCAACTTGGGGTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CCA 90 bp ATTATAGCCAACCTTGGGTTTTGGAAGTCCCCATTCTCCACTCATTaGATCCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTTT +
Preference number: 1 (lower is better)
Translates to: IIANLGFWKSPFSTH*ILRLRLNFPASIHF
Trigger: AAAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCAAGGTTGGCTATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CCA 90 bp AGGGAACATTTGGTGATGTCTAGAGACATTTTGCGTTATCACAGCTaGGGGGTTTCTGGTGTCAAGTGGTTAGAGACCATGAGTGGATAC +
Preference number: 1 (lower is better)
Translates to: REHLVMSRDILRYHS*GVSGVKWLETMSGY
Trigger: GTATCCACTCATGGTCTCTAACCACTTGACACCAGAAACCCCCCAGCTGTGATAACGCAAAATGTCTCTAGACATCACCAAATGTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR TCA 90 bp TGTTTAGTGACCATGTGGACATTCAGCACAGGTGAGCTTCTCAAGTaGGAGCCATGTGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGA +
Preference number: 1 (lower is better)
Translates to: CLVTMWTFSTGELLK*EPCVPKRKEGLSIR
Trigger: TCTTATGGATAAACCCTCCTTTCTTTTGGGGACACATGGCTCTCACTTGAGAAGCTCACCTGTGCTGAATGTCCACATGGTCACTAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR TCA 90 bp CATCTTCCTTCCATTTCTCTGTCTTGGGACATGGTAATTTGGAGGTaGGACCACTCTTTCTTGTCCCTGACAAAGAATCCTGTCATCTGC +
Preference number: 1 (lower is better)
Translates to: HLPSISLSWDMVIWR*DHSFLSLTKNPVIC
Trigger: GCAGATGACAGGATTCTTTGTCAGGGACAAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAAGACAGAGAAATGGAAGGAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
3UTR CCA 90 bp TCCAAGTCATGTGGTTATGCAGAGATTATAGCCAACCTTGGGTTTTaGAAGTCCCCATTCTCCACTCATTGGATCCTAAGGCTCAGGTTA +
Preference number: 1 (lower is better)
Translates to: SKSCGYAEIIANLGF*KSPFSTHWILRLRL
Trigger: TAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCAAGGTTGGCTATAATCTCTGCATAACCACATGACTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR TCA 90 bp CTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTaGGAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCC +
Preference number: 1 (lower is better)
Translates to: LTTKNTPAKNVNCAD*ETLDYRDTRANSSA
Trigger: GGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR TCA 90 bp CTCACAGTTCCCAATAAGGCAACAGAATCCTCATCCAACATATATTaGCTTGTGGAACCCAACGGCCTGTTTTGGTTTCATTTCAGCGCA +
Preference number: 1 (lower is better)
Translates to: LTVPNKATESSSNIY*LVEPNGLFWFHFSA
Trigger: TGCGCTGAAATGAAACCAAAACAGGCCGTTGGGTTCCACAAGTCAATATATGTTGGATGAGGATTCTGTTGCCTTATTGGGAACTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CCA 90 bp TCCATTTTCAAAGTGTCTACTTATTCCTGTGCTTCCCAGATTGCATaGCTCAATGGTAAGTCTCCAGGACCCCCAGAACAATTCCTCTAT +
Preference number: 1 (lower is better)
Translates to: SIFKVSTYSCASQIA*LNGKSPGPPEQFLY
Trigger: ATAGAGGAATTGTTCTGGGGGTCCTGGAGACTTACCATTGAGCCATGCAATCTGGGAAGCACAGGAATAAGTAGACACTTTGAAAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CCA 90 bp CTCCCTTCTCAGATGGCACATTCAAGAAACTGTTGCTTATGCCCCTaGGAGCCAGAGCCTTACTTAAGTCTTACCAAGTCAAATATCTAT +
Preference number: 1 (lower is better)
Translates to: LPSQMAHSRNCCLCP*EPEPYLSLTKSNIY
Trigger: ATAGATATTTGACTTGGTAAGACTTAAGTAAGGCTCTGGCTCCCAGGGGCATAAGCAACAGTTTCTTGAATGTGCCATCTGAGAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CCA 90 bp AGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTaGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACAC +
Preference number: 1 (lower is better)
Translates to: RTLRPKMSIVQIEKP*TIGIQEQTLQPFPH
Trigger: GTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR GCA 90 bp TTAACTCAGCAACAATGTTCACCTCCCTTGACGAAGCCATATGGATaGTTATGTGAGGAGGATGCATCACCTTTTTCTAAATCATGTCAC +
Preference number: 1 (lower is better)
Translates to: LTQQQCSPPLTKPYG*LCEEDASPFSKSCH
Trigger: GTGACATGATTTAGAAAAAGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGGTGAACATTGTTGCTGAGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CCA 90 bp TTCCCAATAAGGCAACAGAATCCTCATCCAACATATATTGACTTGTaGAACCCAACGGCCTGTTTTGGTTTCATTTCAGCGCAAGTAGAA +
Preference number: 1 (lower is better)
Translates to: FPIRQQNPHPTYIDL*NPTACFGFISAQVE
Trigger: TTCTACTTGCGCTGAAATGAAACCAAAACAGGCCGTTGGGTTCCACAAGTCAATATATGTTGGATGAGGATTCTGTTGCCTTATTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR GCA 90 bp CTTCTTGTAAAGCAACATATGTCTTTTCTGCAGGAATGTCTGAGTTaGACAGTCAAGATCGTTGCTGTTCATTGTTCTTTTTCTCAGCTC +
Preference number: 1 (lower is better)
Translates to: LLVKQHMSFLQECLS*TVKIVAVHCSFSQL
Trigger: GAGCTGAGAAAAAGAACAATGAACAGCAACGATCTTGACTGTGCAACTCAGACATTCCTGCAGAAAAGACATATGTTGCTTTACAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR TCA 90 bp ATAGAAAATGCAGCAAACTCAAGTCAAGACAATAGAGAGATATGCTaGGAACTTAATACTCAAGCCTTAATCAGGCACCAGATGCCAAGA +
Preference number: 1 (lower is better)
Translates to: IENAANSSQDNREIC*ELNTQALIRHQMPR
Trigger: TCTTGGCATCTGGTGCCTGATTAAGGCTTGAGTATTAAGTTCTCAGCATATCTCTCTATTGTCTTGACTTGAGTTTGCTGCATTTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR GCA 90 bp ATTCTGCTTTGTAATTCCAGTGAAAATGTCTTCTATTGTAGTTCCTaGTACATTACTATGCTTACTTTATCTGACATTGGCTCTCATCTG +
Preference number: 1 (lower is better)
Translates to: ILLCNSSENVFYCSS*YITMLTLSDIGSHL
Trigger: CAGATGAGAGCCAATGTCAGATAAAGTAAGCATAGTAATGTAGCAGGAACTACAATAGAAGACATTTTCACTGGAATTACAAAGCAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR CCA 90 bp TGCTCTCCCTTTCAACACTGTGGTGGGAAGTACTCTGTTACCACCCCAAGTTGGTTGCGTTATCACAGCTaGGGGGTTTCTGGTGTCAAG +
Preference number: 2 (lower is better)
Translates to: CSPFQHCGGKYSVTTPSWLRYHS*GVSGVK
Trigger: CTTGACACCAGAAACCCCCCAGCTGTGATAACGCAA...CCAACTTGGGGTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CCA 90 bp TGCTCTCCCTTTCAACACTGTGGTGGGAAGTACTCTGTTACCACCCCAAGTTGGACATTGGCTCTCATCTaGGGTTCTGAAAAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: CSPFQHCGGKYSVTTPSWTLALI*GSEKKL
Trigger: GAGCTTCTTTTCAGAACCCCAGATGAGAGCCAATGT...CCAACTTGGGGTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CCA 90 bp AGACCAATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATGGCTGTTGCTTATGCCCCTaGGAGCCAGAGCCTTACTTA +
Preference number: 2 (lower is better)
Translates to: RPMCSKENSQPGSPFSDGCCLCP*EPEPYL
Trigger: TAAGTAAGGCTCTGGCTCCCAGGGGCATAAGCAACA...GCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CAA 90 bp GATTATAGCCAACCTTGGGTTTTGGAAGTCCCCATTCTCCACTCATaGGATCCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTT +
Preference number: 2 (lower is better)
Translates to: DYSQPWVLEVPILHS*DPKAQVKLPGIHPL
Trigger: AAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCAAGGTTGGCTATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CAA 90 bp CATCTGAGACCCTGGAATTTAACTCAGCAACAATGTTCACCTCCCTaGACGAAGCCATATGGATGCTTATGTGAGGAGGATGCATCACCT +
Preference number: 2 (lower is better)
Translates to: HLRPWNLTQQQCSPP*TKPYGCLCEEDASP
Trigger: AGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGGTGAACATTGTTGCTGAGTTAAATTCCAGGGTCTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CAA 90 bp AGAGCCATGTGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGACTTaGCTCTCCCTTTCAACACTGTGGTGGGAAGTACTCTGTTACCAC +
Preference number: 2 (lower is better)
Translates to: RAMCPQKKGGFIHKT*LSLSTLWWEVLCYH
Trigger: GTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCAAAGTCTTATGGATAAACCCTCCTTTCTTTTGGGGACACATGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CCA 90 bp TGCTCTCCCTTTCAACACTGTGGTGGGAAGTACTCTGTTACCACCCCAAGTTGGCAGATTGAGAAACCTTaGACTATAGGGATACAAGAG +
Preference number: 2 (lower is better)
Translates to: CSPFQHCGGKYSVTTPSWQIEKP*TIGIQE
Trigger: CTCTTGTATCCCTATAGTCCAAGGTTTCTCAATCTG...CCAACTTGGGGTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CAA 90 bp TTCCAAGTCATGTGGTTATGCAGAGATTATAGCCAACCTTGGGTTTaGGAAGTCCCCATTCTCCACTCATTGGATCCTAAGGCTCAGGTT +
Preference number: 2 (lower is better)
Translates to: FQVMWLCRDYSQPWV*EVPILHSLDPKAQV
Trigger: AACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCAAGGTTGGCTATAATCTCTGCATAACCACATGACTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR TCA 90 bp TGCTCTCCCTTTCAACACTGTGGTGGGAAGTACTCTGTTACCACCCCAAGTTGGGAGAAAAGTAGTCTTTaGAATATTTACGTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: CSPFQHCGGKYSVTTPSWEKSSL*NIYVQE
Trigger: CTCCTGGACGTAAATATTTCAAAGACTACTTTTCTC...CCAACTTGGGGTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR TCA 90 bp AGAAGTGAGCAGACAGGGCAATTAAAGTATTTCACCAACCATCCAAAGGGGAGAAATGTTCACCTCCCTTaGCGAAGCCATATGGATGCT +
Preference number: 2 (lower is better)
Translates to: RSEQTGQLKYFTNHPKGRNVHLP*RSHMDA
Trigger: AGCATCCATATGGCTTCGTCAAGGGAGGTGAACATT...TCTCCCCTTTGGATGGTTGGTGAAATACTTTAATTGCCCTGTCTGCTCACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR TCA 90 bp TGCTCTCCCTTTCAACACTGTGGTGGGAAGTACTCTGTTACCACCCCAAGTTGGAATAGAGAGATATGCTaGGAACTTAATACTCAAGCC +
Preference number: 2 (lower is better)
Translates to: CSPFQHCGGKYSVTTPSWNREIC*ELNTQA
Trigger: GGCTTGAGTATTAAGTTCTCAGCATATCTCTCTATT...CCAACTTGGGGTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR GCA 90 bp GAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGACGAAGCCATATGGATaGTTATGTGAGGAGGATGCA +
Preference number: 2 (lower is better)
Translates to: ESPHHKEHSGQKCQLCRLTKPYG*LCEEDA
Trigger: TGCATCCTCCTCACATAAGCATCCATATGGCTTCGT...CAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR CCA 90 bp CTGGTGGTTCTCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTGATAACCATCTGAGACCCTaGAATTTAACTCAGCAACAA +
Preference number: 2 (lower is better)
Translates to: LVVLNQGQICHPQGTFGDNHLRP*NLTQQQ
Trigger: TTGTTGCTGAGTTAAATTCCAGGGTCTCAGATGGTT...ATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGAGAACCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR CCA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTAAAGGAAGACAGCCCTaGCATCAGATAAACCATTCC +
Preference number: 2 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQIKGRQP*HQINHS
Trigger: GGAATGGTTTATCTGATGCCAGGGCTGTCTTCCTTT...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR TCA 90 bp TGGGTTTTGGAAGTCCCCATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAAATATGGATGCTTATGTaGGGAGGATGCATCACCTTT +
Preference number: 2 (lower is better)
Translates to: WVLEVPILHSLDPKAQVKIWMLM*GGCITF
Trigger: AAAGGTGATGCATCCTCCTCACATAAGCATCCATAT...TTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR CCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCAAAAGGAAGACAGCCCTaGCATCAGATAAACCATTCC +
Preference number: 2 (lower is better)
Translates to: ETLDYRDTRANSSAISTPKGRQP*HQINHS
Trigger: GGAATGGTTTATCTGATGCCAGGGCTGTCTTCCTTT...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CAA 90 bp CAGTTCCCAATAAGGCAACAGAATCCTCATCCAACATATATTGACTaGTGGAACCCAACGGCCTGTTTTGGTTTCATTTCAGCGCAAGTA +
Preference number: 2 (lower is better)
Translates to: QFPIRQQNPHPTYID*WNPTACFGFISAQV
Trigger: TACTTGCGCTGAAATGAAACCAAAACAGGCCGTTGGGTTCCACAAGTCAATATATGTTGGATGAGGATTCTGTTGCCTTATTGGGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR TCA 90 bp ATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCAGAGAAAAGTAGTCTTTaGAATATTTACGTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: ILHSLDPKAQVKLPGIHPEKSSL*NIYVQE
Trigger: CTCCTGGACGTAAATATTTCAAAGACTACTTTTCTC...TGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR GCA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTCAAGTCATGTGGTTATaGAGAGATTATAGCCAACCT +
Preference number: 2 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQIQVMWL*RDYSQP
Trigger: AGGTTGGCTATAATCTCTGCATAACCACATGACTTG...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR GCA 90 bp CTGGTGGTTCTCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTGATCAAAAATGTCAATTGTaGAGATTGAGAAACCTTGGA +
Preference number: 2 (lower is better)
Translates to: LVVLNQGQICHPQGTFGDQKCQL*RLRNLG
Trigger: TCCAAGGTTTCTCAATCTGCACAATTGACATTTTTG...ATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGAGAACCACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR GCA 90 bp AGACCAATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATGGCCACAGTCAAGATCGTTaGTGTTCATTGTTCTTTTTC +
Preference number: 2 (lower is better)
Translates to: RPMCSKENSQPGSPFSDGHSQDR*CSLFFF
Trigger: GAAAAAGAACAATGAACAGCAACGATCTTGACTGTG...GCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CCA 90 bp CTGGTGGTTCTCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTGATTTCTTGTTCCCCTCATaGTACATAAATATCAGAGAA +
Preference number: 2 (lower is better)
Translates to: LVVLNQGQICHPQGTFGDFLFPS*YINIRE
Trigger: TTCTCTGATATTTATGTACCATGAGGGGAACAAGAA...ATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGAGAACCACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR CCA 90 bp GGTTGCAGAAAGAGCCAAAGCCAATTTGGAAGAAGTGAGAAACTTACAGGTTTGCCATTCTCCACTCATTaGATCCTAAGGCTCAGGTTA +
Preference number: 2 (lower is better)
Translates to: GCRKSQSQFGRSEKLTGLPFSTH*ILRLRL
Trigger: TAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGG...CAAACCTGTAAGTTTCTCACTTCTTCCAAATTGGCTTTGGCTCTTTCTGCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR GCA 90 bp CCATGTGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGACTTTGCTCTCCCTTTCAAGTCATGTGGTTATaGAGAGATTATAGCCAACCT +
Preference number: 2 (lower is better)
Translates to: PCVPKRKEGLSIRLCSPFQVMWL*RDYSQP
Trigger: AGGTTGGCTATAATCTCTGCATAACCACATGACTTG...AAAGGGAGAGCAAAGTCTTATGGATAAACCCTCCTTTCTTTTGGGGACACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CCA 90 bp CCTCCCTTGACGAAGCCATATGGATGCTTATGTGAGGAGGATGCATCACCTTTTTTCTTGTTCCCCTCATaGTACATAAATATCAGAGAA +
Preference number: 2 (lower is better)
Translates to: PPLTKPYGCLCEEDASPFFLFPS*YINIRE
Trigger: TTCTCTGATATTTATGTACCATGAGGGGAACAAGAA...AAAAGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR CCA 90 bp GGTTGCAGAAAGAGCCAAAGCCAATTTGGAAGAAGTGAGAAACTTACAGGTTTGGATTATAGCCAACCTTaGGTTTTGGAAGTCCCCATT +
Preference number: 2 (lower is better)
Translates to: GCRKSQSQFGRSEKLTGLDYSQP*VLEVPI
Trigger: AATGGGGACTTCCAAAACCCAAGGTTGGCTATAATC...CAAACCTGTAAGTTTCTCACTTCTTCCAAATTGGCTTTGGCTCTTTCTGCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR GCA 90 bp GGTTGCAGAAAGAGCCAAAGCCAATTTGGAAGAAGTGAGAAACTTACAGGTTTGTTGAGGTTGAAGTCTTaGTTTTGCTTCACTCTAAGG +
Preference number: 2 (lower is better)
Translates to: GCRKSQSQFGRSEKLTGLLRLKS*FCFTLR
Trigger: CCTTAGAGTGAAGCAAAAGCAAGACTTCAACCTCAA...CAAACCTGTAAGTTTCTCACTTCTTCCAAATTGGCTTTGGCTCTTTCTGCAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CAA 90 bp CCTTCTTGTAAAGCAACATATGTCTTTTCTGCAGGAATGTCTGAGTaGCACAGTCAAGATCGTTGCTGTTCATTGTTCTTTTTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: PSCKATYVFSAGMSE*HSQDRCCSLFFFSA
Trigger: AGCTGAGAAAAAGAACAATGAACAGCAACGATCTTGACTGTGCAACTCAGACATTCCTGCAGAAAAGACATATGTTGCTTTACAAGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CCA 90 bp CCATGTGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGACTTTGCTCTCCCTTTATTTGGTGTGTGTTTTaGTTTGTGTCCAAAGTATTG +
Preference number: 2 (lower is better)
Translates to: PCVPKRKEGLSIRLCSPFIWCVF*FVSKVL
Trigger: CAATACTTTGGACACAAACCAAAACACACACCAAAT...AAAGGGAGAGCAAAGTCTTATGGATAAACCCTCCTTTCTTTTGGGGACACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR GCA 90 bp CAGATAAGTCTCACAGTTCCCAATAAGGCAACAGAATCCTCATCCAACATATATCCTTTGAATATGAATTaGTCACCTCTACCAGGTATG +
Preference number: 2 (lower is better)
Translates to: QISLTVPNKATESSSNIYPLNMN*SPLPGM
Trigger: CATACCTGGTAGAGGTGAGCAATTCATATTCAAAGG...ATATATGTTGGATGAGGATTCTGTTGCCTTATTGGGAACTGTGAGACTTATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CCA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTATTTGGTGTGTGTTTTaGTTTGTGTCCAAAGTATTG +
Preference number: 2 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTIWCVF*FVSKVL
Trigger: CAATACTTTGGACACAAACCAAAACACACACCAAAT...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR CCA 90 bp CAGATAAGTCTCACAGTTCCCAATAAGGCAACAGAATCCTCATCCAACATATATGTTAGAGACCATGAGTaGATACTGCTGAACATCTTA +
Preference number: 2 (lower is better)
Translates to: QISLTVPNKATESSSNIYVRDHE*ILLNIL
Trigger: TAAGATGTTCAGCAGTATCCACTCATGGTCTCTAAC...ATATATGTTGGATGAGGATTCTGTTGCCTTATTGGGAACTGTGAGACTTATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CCA 90 bp CAGATAAGTCTCACAGTTCCCAATAAGGCAACAGAATCCTCATCCAACATATATGAGCACTCCTTCTTATaGATACATGTCTTCATTTGC +
Preference number: 2 (lower is better)
Translates to: QISLTVPNKATESSSNIYEHSFL*IHVFIC
Trigger: GCAAATGAAGACATGTATCCATAAGAAGGAGTGCTC...ATATATGTTGGATGAGGATTCTGTTGCCTTATTGGGAACTGTGAGACTTATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR TCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGAAAAGTAGTCTTTaGAATATTTACGTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIEKSSL*NIYVQE
Trigger: CTCCTGGACGTAAATATTTCAAAGACTACTTTTCTC...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
3UTR-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAATTTGGTGTGTGTTTTaGTTTGTGTCCAAAGTATTG +
Preference number: 2 (lower is better)
Translates to: LPVRSSFLFPSWYINIREIWCVF*FVSKVL
Trigger: CAATACTTTGGACACAAACCAAAACACACACCAAAT...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
3UTR-3UTR CCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGATTTGGTGTGTGTTTTaGTTTGTGTCCAAAGTATTG +
Preference number: 2 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVIWCVF*FVSKVL
Trigger: CAATACTTTGGACACAAACCAAAACACACACCAAAT...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
3UTR-3UTR CCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGTTCTTGTTCCCCTCATaGTACATAAATATCAGAGAA +
Preference number: 2 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVFLFPS*YINIRE
Trigger: TTCTCTGATATTTATGTACCATGAGGGGAACAAGAA...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
3UTR-3UTR CCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAATTTGGTGTGTGTTTTaGTTTGTGTCCAAAGTATTG +
Preference number: 2 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIIWCVF*FVSKVL
Trigger: CAATACTTTGGACACAAACCAAAACACACACCAAAT...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
3UTR-3UTR CAA 90 bp TGCTCTCCCTTTCAACACTGTGGTGGGAAGTACTCTGTTACCACCCCAAGTTGGACCCCCAGGGAACATTaGGTGATGTCTAGAGACATT +
Preference number: 3 (lower is better)
Translates to: CSPFQHCGGKYSVTTPSWTPREH*VMSRDI
Trigger: AATGTCTCTAGACATCACCAAATGTTCCCTGGGGGT...CCAACTTGGGGTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR TCA 72 bp GGTGTCAAGTGGTTAGAGACCATGAGTGGATACTGCTaGACATCTTACAATGCACAGGAAAGCCCTCACCAC +
Preference number: 3 (lower is better)
Translates to: GVKWLETMSGYC*TSYNAQESPHH
Trigger: GTGGTGAGGGCTTTCCTGTGCATTGTAAGATGTTCAGCAGTATCCACTCATGGTCTCTAACCACTTGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR TCA 72 bp TCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTaGTGTCTAGAGACATTTTGCGTTATCACAGCTGGG +
Preference number: 3 (lower is better)
Translates to: SRANLPPPGNIW*CLETFCVITAG
Trigger: CCCAGCTGTGATAACGCAAAATGTCTCTAGACATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR TCA 72 bp ACCATGTGGACATTCAGCACAGGTGAGCTTCTCAAGTaGGAGCCATGTGTCCCCAAAAGAAAGGAGGGTTTA +
Preference number: 3 (lower is better)
Translates to: TMWTFSTGELLK*EPCVPKRKEGL
Trigger: TAAACCCTCCTTTCTTTTGGGGACACATGGCTCTCACTTGAGAAGCTCACCTGTGCTGAATGTCCACATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR GCA 72 bp AGAGACCATGAGTGGATACTGCTGAACATCTTACAATaGACAGGAAAGCCCTCACCACAAAGAACACTCCGG +
Preference number: 3 (lower is better)
Translates to: RDHEWILLNILQ*TGKPSPQRTLR
Trigger: CCGGAGTGTTCTTTGTGGTGAGGGCTTTCCTGTGCATTGTAAGATGTTCAGCAGTATCCACTCATGGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR GCA 72 bp CCTTCTCAGATGGCACATTCAAGAAACTGTTGCTTATaGCCCTGGGAGCCAGAGCCTTACTTAAGTCTTACC +
Preference number: 3 (lower is better)
Translates to: PSQMAHSRNCCL*PWEPEPYLSLT
Trigger: GGTAAGACTTAAGTAAGGCTCTGGCTCCCAGGGGCATAAGCAACAGTTTCTTGAATGTGCCATCTGAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CCA 72 bp AAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATaGCACATTCAAGAAACTGTTGCTTATGCCCCTGGG +
Preference number: 3 (lower is better)
Translates to: KGKLTTWVSLLR*HIQETVAYAPG
Trigger: CCCAGGGGCATAAGCAACAGTTTCTTGAATGTGCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CAA 90 bp TGCTCTCCCTTTCAACACTGTGGTGGGAAGTACTCTGTTACCACCCCAAGTTGGGTTGAGGTTGAAGTCTaGCTTTTGCTTCACTCTAAG +
Preference number: 3 (lower is better)
Translates to: CSPFQHCGGKYSVTTPSWVEVEV*LLLHSK
Trigger: CTTAGAGTGAAGCAAAAGCAAGACTTCAACCTCAAC...CCAACTTGGGGTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CAA 90 bp CCATGTGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGACTTTGCTCTCCCTTTCAATGTTCACCTCCCTaGACGAAGCCATATGGATGC +
Preference number: 3 (lower is better)
Translates to: PCVPKRKEGLSIRLCSPFQCSPP*TKPYGC
Trigger: GCATCCATATGGCTTCGTCAAGGGAGGTGAACATTG...AAAGGGAGAGCAAAGTCTTATGGATAAACCCTCCTTTCTTTTGGGGACACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CAA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCACCCATTCTCCACTCATaGGATCCTAAGGCTCAGGTT +
Preference number: 3 (lower is better)
Translates to: ETLDYRDTRANSSAISTPPILHS*DPKAQV
Trigger: AACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGG...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR CAA 90 bp GGTTGCAGAAAGAGCCAAAGCCAATTTGGAAGAAGTGAGAAACTTACAGGTTTGAGCCAACCTTGGGTTTaGGAAGTCCCCATTCTCCAC +
Preference number: 3 (lower is better)
Translates to: GCRKSQSQFGRSEKLTGLSQPWV*EVPILH
Trigger: GTGGAGAATGGGGACTTCCAAAACCCAAGGTTGGCT...CAAACCTGTAAGTTTCTCACTTCTTCCAAATTGGCTTTGGCTCTTTCTGCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR TCA 72 bp AACATGTTTAGTGACCATGTGGACATTCAGCACAGGTaGGCTTCTCAAGTGAGAGCCATGTGTCCCCAAAAG +
Preference number: 3 (lower is better)
Translates to: NMFSDHVDIQHR*ASQVRAMCPQK
Trigger: CTTTTGGGGACACATGGCTCTCACTTGAGAAGCTCACCTGTGCTGAATGTCCACATGGTCACTAAACATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CCA 72 bp GGGGGTTTCTGGTGTCAAGTGGTTAGAGACCATGAGTaGATACTGCTGAACATCTTACAATGCACAGGAAAG +
Preference number: 3 (lower is better)
Translates to: GGFWCQVVRDHE*ILLNILQCTGK
Trigger: CTTTCCTGTGCATTGTAAGATGTTCAGCAGTATCCACTCATGGTCTCTAACCACTTGACACCAGAAACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CCA 72 bp TTGGTGATGTCTAGAGACATTTTGCGTTATCACAGCTaGGGGGTTTCTGGTGTCAAGTGGTTAGAGACCATG +
Preference number: 3 (lower is better)
Translates to: LVMSRDILRYHS*GVSGVKWLETM
Trigger: CATGGTCTCTAACCACTTGACACCAGAAACCCCCCAGCTGTGATAACGCAAAATGTCTCTAGACATCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CCA 72 bp AAAGTGTCTACTTATTCCTGTGCTTCCCAGATTGCATaGCTCAATGGTAAGTCTCCAGGACCCCCAGAACAA +
Preference number: 3 (lower is better)
Translates to: KVSTYSCASQIA*LNGKSPGPPEQ
Trigger: TTGTTCTGGGGGTCCTGGAGACTTACCATTGAGCCATGCAATCTGGGAAGCACAGGAATAAGTAGACACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CCA 72 bp CACTGTGGTGGGAAGTACTCTGTTACCACCCCAAGTTaGCATAGCTCGATTACTTTAAGTTCTCCAAGTCAC +
Preference number: 3 (lower is better)
Translates to: HCGGKYSVTTPS*HSSITLSSPSH
Trigger: GTGACTTGGAGAACTTAAAGTAATCGAGCTATGCCAACTTGGGGTGGTAACAGAGTACTTCCCACCACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CCA 72 bp CAGATGGCACATTCAAGAAACTGTTGCTTATGCCCCTaGGAGCCAGAGCCTTACTTAAGTCTTACCAAGTCA +
Preference number: 3 (lower is better)
Translates to: QMAHSRNCCLCP*EPEPYLSLTKS
Trigger: TGACTTGGTAAGACTTAAGTAAGGCTCTGGCTCCCAGGGGCATAAGCAACAGTTTCTTGAATGTGCCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CCA 72 bp TTTATCCATAAGACTTTGCTCTCCCTTTCAACACTGTaGTGGGAAGTACTCTGTTACCACCCCAAGTTGGCA +
Preference number: 3 (lower is better)
Translates to: FIHKTLLSLSTL*WEVLCYHPKLA
Trigger: TGCCAACTTGGGGTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCAAAGTCTTATGGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CAA 90 bp TCACACAACTCAGACACACACACAGACACACAAATATTCATGCGTTATACCCATCCTGTGCTTCCCAGATaGCATGGCTCAATGGTAAGT +
Preference number: 3 (lower is better)
Translates to: SHNSDTHTDTQIFMRYTHPVLPR*HGSMVS
Trigger: ACTTACCATTGAGCCATGCAATCTGGGAAGCACAGG...ATGGGTATAACGCATGAATATTTGTGTGTCTGTGTGTGTGTCTGAGTTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR TCA 72 bp TCCATTTCTCTGTCTTGGGACATGGTAATTTGGAGGTaGGACCACTCTTTCTTGTCCCTGACAAAGAATCCT +
Preference number: 3 (lower is better)
Translates to: SISLSWDMVIWR*DHSFLSLTKNP
Trigger: AGGATTCTTTGTCAGGGACAAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAAGACAGAGAAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
3UTR CCA 72 bp CAAGTCATGTGGTTATGCAGAGATTATAGCCAACCTTaGGTTTTGGAAGTCCCCATTCTCCACTCATTGGAT +
Preference number: 3 (lower is better)
Translates to: QVMWLCRDYSQP*VLEVPILHSLD
Trigger: ATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCAAGGTTGGCTATAATCTCTGCATAACCACATGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CCA 72 bp AGGCAACAGAATCCTCATCCAACATATATTGACTTGTaGAACCCAACGGCCTGTTTTGGTTTCATTTCAGCG +
Preference number: 3 (lower is better)
Translates to: RQQNPHPTYIDL*NPTACFGFISA
Trigger: CGCTGAAATGAAACCAAAACAGGCCGTTGGGTTCCACAAGTCAATATATGTTGGATGAGGATTCTGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CAA 90 bp TGGGTTTTGGAAGTCCCCATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAAGTTAGAAGTAGTTTCTaGTTCCCCTCATGGTACATA +
Preference number: 3 (lower is better)
Translates to: WVLEVPILHSLDPKAQVKVRSSF*FPSWYI
Trigger: TATGTACCATGAGGGGAACAAGAAACTACTTCTAAC...TTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR CAA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGTTAGAAGTAGTTTCTaGTTCCCCTCATGGTACATA +
Preference number: 3 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQIVRSSF*FPSWYI
Trigger: TATGTACCATGAGGGGAACAAGAAACTACTTCTAAC...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR TCA 72 bp CCCAATAAGGCAACAGAATCCTCATCCAACATATATTaGCTTGTGGAACCCAACGGCCTGTTTTGGTTTCAT +
Preference number: 3 (lower is better)
Translates to: PNKATESSSNIY*LVEPNGLFWFH
Trigger: ATGAAACCAAAACAGGCCGTTGGGTTCCACAAGTCAATATATGTTGGATGAGGATTCTGTTGCCTTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR GCA 72 bp CAACAATGTTCACCTCCCTTGACGAAGCCATATGGATaGTTATGTGAGGAGGATGCATCACCTTTTTCTAAA +
Preference number: 3 (lower is better)
Translates to: QQCSPPLTKPYG*LCEEDASPFSK
Trigger: TTTAGAAAAAGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGGTGAACATTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CCA 72 bp GAAAAGACCAATGTGTTCAAAGGAAAACTCACAACCTaGGTCTCCCTTCTCAGATGGCACATTCAAGAAACT +
Preference number: 3 (lower is better)
Translates to: EKTNVFKGKLTT*VSLLRWHIQET
Trigger: AGTTTCTTGAATGTGCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR TCA 72 bp AAAGGAAGACAGCCCTGGCATCAGATAAACCATTCCTaGATGAGTATAAAGACCCCACCATTATTCTTCTTG +
Preference number: 3 (lower is better)
Translates to: KGRQPWHQINHS*MSIKTPPLFFL
Trigger: CAAGAAGAATAATGGTGGGGTCTTTATACTCATTCAGGAATGGTTTATCTGATGCCAGGGCTGTCTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR TCA 72 bp AAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTaGGAAACCTTGGACTATAGGGATACAAGAGCAAAC +
Preference number: 3 (lower is better)
Translates to: KNTPAKNVNCAD*ETLDYRDTRAN
Trigger: GTTTGCTCTTGTATCCCTATAGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR-3UTR CAA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGGTTAGAAGTAGTTTCTaGTTCCCCTCATGGTACATA +
Preference number: 3 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVVRSSF*FPSWYI
Trigger: TATGTACCATGAGGGGAACAAGAAACTACTTCTAAC...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
3UTR GCA 72 bp ATAGTAGATAATATGTCCTTGAAGGTTGTGCCGTTGTaGTCTTATTCCACTGAAGAAATGATTCACATCCCA +
Preference number: 3 (lower is better)
Translates to: IVDNMSLKVVPL*SYSTEEMIHIP
Trigger: TGGGATGTGAATCATTTCTTCAGTGGAATAAGAGCACAACGGCACAACCTTCAAGGACATATTATCTACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR-3UTR CAA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGTTAGAAGTAGTTTCTaGTTCCCCTCATGGTACATA +
Preference number: 3 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIVRSSF*FPSWYI
Trigger: TATGTACCATGAGGGGAACAAGAAACTACTTCTAAC...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp TGCTCTCCCTTTCAACACTGTGGTGGGAAGTACTCTGTTACCACCCCAAGTTGGCAGGCTGGCGGCTGGTaGAGGAGGTTGTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: CSPFQHCGGKYSVTTPSWQAGGW*RRLLPG
Trigger: CCCCGGCAACAACCTCCTTCACCAGCCGCCAGCCTG...CCAACTTGGGGTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp TTCTCTGTCTTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTGTCCCTCTGCCCCGCCGTCCCTaGCGCCCGGGTGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: FSVLGHGNLEVRPLFLVPLPRRP*RPGELL
Trigger: CAGGAGTTCACCCGGGCGGCAGGGACGGCGGGGCAG...AGGGACAAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAAGACAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR TCA 90 bp GAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGCAGGCTGGCGGCTGGTaGAGGAGGTTGTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: ESPHHKEHSGQKCQLCRLQAGGW*RRLLPG
Trigger: CCCCGGCAACAACCTCCTTCACCAGCCGCCAGCCTG...CAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp CCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTTTGTCCTAACCATCTGTCCCTGCCGCCCGGGTaGACTCCTGCAAACTCATGC +
Preference number: 4 (lower is better)
Translates to: PKAQVKLPGIHPLCPNHLSLPPG*TPANSC
Trigger: GCATGAGTTTGCAGGAGTTCACCCGGGCGGCAGGGA...CAGATGGTTAGGACAAAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp TCACACAACTCAGACACACACACAGACACACAAATATTCATGCGTTATACCCATCTGCCCCGCCGTCCCTaGCGCCCGGGTGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: SHNSDTHTDTQIFMRYTHLPRRP*RPGELL
Trigger: CAGGAGTTCACCCGGGCGGCAGGGACGGCGGGGCAG...ATGGGTATAACGCATGAATATTTGTGTGTCTGTGTGTGTGTCTGAGTTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp CTGGTGGTTCTCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTGATGCTGTCTGTCCAGGCTaGCGGCTGGTGAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LVVLNQGQICHPQGTFGDAVCPG*RLVKEV
Trigger: AACCTCCTTCACCAGCCGCCAGCCTGGACAGACAGC...ATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGAGAACCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp AGACCAATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATGGCGTGTCCAGGAGGTGCTaGAGCCACTCCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: RPMCSKENSQPGSPFSDGVSRRC*SHSHTW
Trigger: CCAGGTGTGGGAGTGGCTCCAGCACCTCCTGGACAC...GCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp CCTCCCTTGACGAAGCCATATGGATGCTTATGTGAGGAGGATGCATCACCTTTTGTGTCCAGGAGGTGCTaGAGCCACTCCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: PPLTKPYGCLCEEDASPFVSRRC*SHSHTW
Trigger: CCAGGTGTGGGAGTGGCTCCAGCACCTCCTGGACAC...AAAAGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp TTCCATTTCTCTGTCTTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTCAGGCTGGCGGCTGGTaGAGGAGGTTGTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: FHFSVLGHGNLEVRPLFLQAGGW*RRLLPG
Trigger: CCCCGGCAACAACCTCCTTCACCAGCCGCCAGCCTG...AAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAAGACAGAGAAATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR TCA 90 bp GAGGTGAGACCACTCTTTCTTGTCCCTGACAAAGAATCCTGTCATCTGCAGAATTCCCTGCCGCCCGGGTaGACTCCTGCAAACTCATGC +
Preference number: 4 (lower is better)
Translates to: EVRPLFLVPDKESCHLQNSLPPG*TPANSC
Trigger: GCATGAGTTTGCAGGAGTTCACCCGGGCGGCAGGGA...ATTCTGCAGATGACAGGATTCTTTGTCAGGGACAAGAAAGAGTGGTCTCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR GCA 90 bp ATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCATTGGTGTCCAGGAGGTaGTGGAGCCACTCCCACACC +
Preference number: 4 (lower is better)
Translates to: ILHSLDPKAQVKLPGIHPLVSRR*WSHSHT
Trigger: GGTGTGGGAGTGGCTCCAGCACCTCCTGGACACCAA...TGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACTGCCCCGCCGTCCCTaGCGCCCGGGTGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRELPRRP*RPGELL
Trigger: CAGGAGTTCACCCGGGCGGCAGGGACGGCGGGGCAG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp GAGGTGAGACCACTCTTTCTTGTCCCTGACAAAGAATCCTGTCATCTGCAGAATTTGGTGTCCAGGAGGTaGTGGAGCCACTCCCACACC +
Preference number: 4 (lower is better)
Translates to: EVRPLFLVPDKESCHLQNLVSRR*WSHSHT
Trigger: GGTGTGGGAGTGGCTCCAGCACCTCCTGGACACCAA...ATTCTGCAGATGACAGGATTCTTTGTCAGGGACAAGAAAGAGTGGTCTCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR GCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATACTGCCCCGCCGTCCCTaGCGCCCGGGTGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTILPRRP*RPGELL
Trigger: CAGGAGTTCACCCGGGCGGCAGGGACGGCGGGGCAG...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp TTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTGTCCCTGACAAAGAAGTGTCCAGGAGGTGCTaGAGCCACTCCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: LGHGNLEVRPLFLVPDKEVSRRC*SHSHTW
Trigger: CCAGGTGTGGGAGTGGCTCCAGCACCTCCTGGACAC...TTCTTTGTCAGGGACAAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACAGGCTGGCGGCTGGTaGAGGAGGTTGTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREQAGGW*RRLLPG
Trigger: CCCCGGCAACAACCTCCTTCACCAGCCGCCAGCCTG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGCCCGGGTGAACTCCTaGAAACTCATGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQIARVNS*KLMLQR
Trigger: CCTCTGCAGCATGAGTTTGCAGGAGTTCACCCGGGC...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp TTCTCTGTCTTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTGTCCCTGCCCGGGTGAACTCCTaGAAACTCATGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FSVLGHGNLEVRPLFLVPARVNS*KLMLQR
Trigger: CCTCTGCAGCATGAGTTTGCAGGAGTTCACCCGGGC...AGGGACAAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAAGACAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR CCA 90 bp GAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGTGGCATCCAGCTGGTTaGTGTCCAGGAGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ESPHHKEHSGQKCQLCRLWHPAG*CPGGAG
Trigger: TCCAGCACCTCCTGGACACCAACCAGCTGGATGCCA...CAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CAA 72 bp GGGTCTCCCTTCTCAGATGGCACATTCAAGAAACTGTaGCTTATGCCCCTGGGAGCCAGAGCCTTACTTAAG +
Preference number: 4 (lower is better)
Translates to: GSPFSDGTFKKL*LMPLGARALLK
Trigger: CTTAAGTAAGGCTCTGGCTCCCAGGGGCATAAGCAACAGTTTCTTGAATGTGCCATCTGAGAAGGGAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp AGACCAATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATGGCGGTTGTTGCCGGGGTTaGGATTCATTACACCACCTC +
Preference number: 4 (lower is better)
Translates to: RPMCSKENSQPGSPFSDGGCCRG*DSLHHL
Trigger: GAGGTGGTGTAATGAATCTCAACCCCGGCAACAACC...GCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATACAGGCTGGCGGCTGGTaGAGGAGGTTGTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIQAGGW*RRLLPG
Trigger: CCCCGGCAACAACCTCCTTCACCAGCCGCCAGCCTG...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp AGACCAATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATGGCCACCTCTACCAGGTATaGCACTGTGGTAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RPMCSKENSQPGSPFSDGHLYQV*HCGRCS
Trigger: AGAGCACCTACCACAGTGTCATACCTGGTAGAGGTG...GCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp CCTCCCTTGACGAAGCCATATGGATGCTTATGTGAGGAGGATGCATCACCTTTTGACATTCAGCACAGGTaGGCTTCTCAAGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PPLTKPYGCLCEEDASPFDIQHR*ASQVRA
Trigger: GGCTCTCACTTGAGAAGCTCACCTGTGCTGAATGTC...AAAAGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp CTGGTGGTTCTCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTGATACCCACTGGAAACATTaGACGTGGAGTAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LVVLNQGQICHPQGTFGDTHWKH*TWSSCL
Trigger: CAGACAGCTACTCCACGTGCAATGTTTCCAGTGGGT...ATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGAGAACCACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTTTGGTGTCCAGGAGGTaGTGGAGCCACTCCCACACC +
Preference number: 4 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTLVSRR*WSHSHT
Trigger: GGTGTGGGAGTGGCTCCAGCACCTCCTGGACACCAA...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp TGGGTTTTGGAAGTCCCCATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAATCAGATGCTGCAAGTTaGTGTAGAGGAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: WVLEVPILHSLDPKAQVKSDAAS*CRGAAP
Trigger: CGGGGCAGCTCCTCTACAGCAACTTGCAGCATCTGA...TTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp TTCTCTGTCTTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTGTCCCTTCAGATGCTGCAAGTTaGTGTAGAGGAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: FSVLGHGNLEVRPLFLVPSDAAS*CRGAAP
Trigger: CGGGGCAGCTCCTCTACAGCAACTTGCAGCATCTGA...AGGGACAAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAAGACAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR CCA 90 bp TTCCATTTCTCTGTCTTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTGCTGTCTGTCCAGGCTaGCGGCTGGTGAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FHFSVLGHGNLEVRPLFLAVCPG*RLVKEV
Trigger: AACCTCCTTCACCAGCCGCCAGCCTGGACAGACAGC...AAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAAGACAGAGAAATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR CCA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCTGGCATCCAGCTGGTTaGTGTCCAGGAGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSWHPAG*CPGGAG
Trigger: TCCAGCACCTCCTGGACACCAACCAGCTGGATGCCA...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp CTTGTCCCTGACAAAGAATCCTGTCATCTGCAGAATCTCTATTCTTCCAGCTGGAGAGGTGCTCGCCGTTaGTGTCGAACTCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LVPDKESCHLQNLYSSSWRGARR*CRTLGK
Trigger: CTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCT...CCAGCTGGAAGAATAGAGATTCTGCAGATGACAGGATTCTTTGTCAGGGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATCCCTGCCGCCCGGGTaGACTCCTGCAAACTCATGC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRESLPPG*TPANSC
Trigger: GCATGAGTTTGCAGGAGTTCACCCGGGCGGCAGGGA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp TGCTCTCCCTTTCAACACTGTGGTGGGAAGTACTCTGTTACCACCCCAAGTTGGCTTTCCAGGTGTTCATaGTGGAAGGCTCAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: CSPFQHCGGKYSVTTPSWLSRCS*WKAQFV
Trigger: AACAAACTGAGCCTTCCATCATGAACACCTGGAAAG...CCAACTTGGGGTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp AGACCAATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATGGCGTTGTCATGGAGATCTaGGCCCGGCAGAAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: RPMCSKENSQPGSPFSDGVVMEI*ARQKVL
Trigger: CAAAACTTTCTGCCGGGCTCAGATCTCCATGACAAC...GCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp AGACCAATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATGGCATGAATTCCCATAAGTaGGTCCCTCTCGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: RPMCSKENSQPGSPFSDGMNSHK*VPLGLC
Trigger: GCACAACCCGAGAGGGACTCACTTATGGGAATTCAT...GCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp ATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCAAGAGGATGTCGCGGATaGATTCCCATAAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: ILHSLDPKAQVKLPGIHPRGCRG*IPISES
Trigger: GGACTCACTTATGGGAATTCATCCGCGACATCCTCT...TGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp ATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTGAGCCACTGCCTCTaGTTTCAAGAACCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: ILHSLDPKAQVKLPGIHPLSHCL*FQEPED
Trigger: GTCTTCAGGTTCTTGAAATCAGAGGCAGTGGCTCAG...TGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp AGAAGTGAGCAGACAGGGCAATTAAAGTATTTCACCAACCATCCAAAGGGGAGACTCATGCTGCAGAGGTaGTCGCCGTTGATGTCGAAC +
Preference number: 4 (lower is better)
Translates to: RSEQTGQLKYFTNHPKGRLMLQR*SPLMSN
Trigger: GTTCGACATCAACGGCGAGCACCTCTGCAGCATGAG...TCTCCCCTTTGGATGGTTGGTGAAATACTTTAATTGCCCTGTCTGCTCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCACTCATGCTGCAGAGGTaGTCGCCGTTGATGTCGAAC +
Preference number: 4 (lower is better)
Translates to: ETLDYRDTRANSSAISTPLMLQR*SPLMSN
Trigger: GTTCGACATCAACGGCGAGCACCTCTGCAGCATGAG...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCATCAGATGCTGCAAGTTaGTGTAGAGGAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: ETLDYRDTRANSSAISTPSDAAS*CRGAAP
Trigger: CGGGGCAGCTCCTCTACAGCAACTTGCAGCATCTGA...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp CCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTTTGTCCTAACCATCTGCATTCAAGAAACTGTTaGTTATGCCCCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PKAQVKLPGIHPLCPNHLHSRNC*LCPWEP
Trigger: TGGCTCCCAGGGGCATAAGCAACAGTTTCTTGAATG...CAGATGGTTAGGACAAAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGTGTCCAGGAGGTGCTaGAGCCACTCCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREVSRRC*SHSHTW
Trigger: CCAGGTGTGGGAGTGGCTCCAGCACCTCCTGGACAC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGGTGTCCAGGAGGTGCTaGAGCCACTCCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVVSRRC*SHSHTW
Trigger: CCAGGTGTGGGAGTGGCTCCAGCACCTCCTGGACAC...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp AGAAGTGAGCAGACAGGGCAATTAAAGTATTTCACCAACCATCCAAAGGGGAGAGACTGGTGGTTGTCATaGAGATCTGAGCCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: RSEQTGQLKYFTNHPKGRDWWLS*RSEPGR
Trigger: TCTGCCGGGCTCAGATCTCCATGACAACCACCAGTC...TCTCCCCTTTGGATGGTTGGTGAAATACTTTAATTGCCCTGTCTGCTCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTTCCTGGGTTCTTGTCTaGGTTCAAGAGGATGTCGCG +
Preference number: 4 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQISWVLV*VQEDVA
Trigger: CGCGACATCCTCTTGAACCCAGACAAGAACCCAGGA...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCGGTTGTTGCCGGGGTTaGGATTCATTACACCACCTC +
Preference number: 4 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSGCCRG*DSLHHL
Trigger: GAGGTGGTGTAATGAATCTCAACCCCGGCAACAACC...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp AGAAGTGAGCAGACAGGGCAATTAAAGTATTTCACCAACCATCCAAAGGGGAGAAGAGGTGCTCGCCGTTaGTGTCGAACTCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RSEQTGQLKYFTNHPKGRRGARR*CRTLGK
Trigger: CTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCT...TCTCCCCTTTGGATGGTTGGTGAAATACTTTAATTGCCCTGTCTGCTCACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATATCCCTGCCGCCCGGGTaGACTCCTGCAAACTCATGC +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTISLPPG*TPANSC
Trigger: GCATGAGTTTGCAGGAGTTCACCCGGGCGGCAGGGA...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp GTTACCACCCCAAGTTGGCATAGCTCGATTACTTTAAGTTCTCCAAGTCACGAATCTGCAACAGGAAGGTaGCTGGTGGTTGTCATGGAG +
Preference number: 4 (lower is better)
Translates to: VTTPSWHSSITLSSPSHESATGR*LVVVME
Trigger: CTCCATGACAACCACCAGTCACCTTCCTGTTGCAGA...TTCGTGACTTGGAGAACTTAAAGTAATCGAGCTATGCCAACTTGGGGTGGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp CTGGTGGTTCTCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTGATCCAGGGAACATTTGGTaGTGTCTAGAGACATTTTGC +
Preference number: 4 (lower is better)
Translates to: LVVLNQGQICHPQGTFGDPGNIW*CLETFC
Trigger: GCAAAATGTCTCTAGACATCACCAAATGTTCCCTGG...ATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGAGAACCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCAGGTGAGCTTCTCAAGTaGGAGCCATGTGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: ETLDYRDTRANSSAISTPGELLK*EPCVPK
Trigger: TTTGGGGACACATGGCTCTCACTTGAGAAGCTCACC...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp CCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTTTGTCCTAACCATCTGGCAAGGCAGGAACTTTaGGAAAAGACCAATGTGTTC +
Preference number: 4 (lower is better)
Translates to: PKAQVKLPGIHPLCPNHLARQEL*EKTNVF
Trigger: GAACACATTGGTCTTTTCTCAAAGTTCCTGCCTTGC...CAGATGGTTAGGACAAAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATTGGTGTCCAGGAGGTaGTGGAGCCACTCCCACACC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRELVSRR*WSHSHT
Trigger: GGTGTGGGAGTGGCTCCAGCACCTCCTGGACACCAA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp GACCACTCTTTCTTGTCCCTGACAAAGAATCCTGTCATCTGCAGAATCTCTATTCTCATGCTGCAGAGGTaGTCGCCGTTGATGTCGAAC +
Preference number: 4 (lower is better)
Translates to: DHSFLSLTKNPVICRISILMLQR*SPLMSN
Trigger: GTTCGACATCAACGGCGAGCACCTCTGCAGCATGAG...AATAGAGATTCTGCAGATGACAGGATTCTTTGTCAGGGACAAGAAAGAGTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR GCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCAGGAACAGGTCACTACTaGACTGGCCGTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: ETLDYRDTRANSSAISTPGTGHY*TGRSTS
Trigger: TGAAGTGGAACGGCCAGTGCAGTAGTGACCTGTTCC...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGCTGTCTGTCCAGGCTaGCGGCTGGTGAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREAVCPG*RLVKEV
Trigger: AACCTCCTTCACCAGCCGCCAGCCTGGACAGACAGC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTTGGAAACATTGCACGTaGAGTAGCTGTCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQIWKHCT*SSCLSR
Trigger: CCTGGACAGACAGCTACTCCACGTGCAATGTTTCCA...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGTGTCCAGGAGGTGCTaGAGCCACTCCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIVSRRC*SHSHTW
Trigger: CCAGGTGTGGGAGTGGCTCCAGCACCTCCTGGACAC...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp TCTTTCTTGTCCCTGACAAAGAATCCTGTCATCTGCAGAATCTCTATTCTTCCATGGCATCCAGCTGGTTaGTGTCCAGGAGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SFLSLTKNPVICRISILPWHPAG*CPGGAG
Trigger: TCCAGCACCTCCTGGACACCAACCAGCTGGATGCCA...TGGAAGAATAGAGATTCTGCAGATGACAGGATTCTTTGTCAGGGACAAGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR CCA 90 bp CCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTTTGTCCTAACCATCTGACATTGGCTCTCATCTaGGGTTCTGAAAAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PKAQVKLPGIHPLCPNHLTLALI*GSEKKL
Trigger: GAGCTTCTTTTCAGAACCCCAGATGAGAGCCAATGT...CAGATGGTTAGGACAAAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp AGACCAATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATGGCCCCAACGGCCTGTTTTaGTTTCATTTCAGCGCAAGT +
Preference number: 4 (lower is better)
Translates to: RPMCSKENSQPGSPFSDGPNGLF*FHFSAS
Trigger: ACTTGCGCTGAAATGAAACCAAAACAGGCCGTTGGG...GCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCATGAATTCCCATAAGTaGGTCCCTCTCGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSMNSHK*VPLGLC
Trigger: GCACAACCCGAGAGGGACTCACTTATGGGAATTCAT...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCACTGATTTCAAGAACCTaGAGACGCCCTCAGATCGGT +
Preference number: 4 (lower is better)
Translates to: ETLDYRDTRANSSAISTPLISRT*RRPQIG
Trigger: ACCGATCTGAGGGCGTCTTCAGGTTCTTGAAATCAG...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp TGGGTTTTGGAAGTCCCCATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAATTTTTACCCCATAGCTaGGCCACTGCCTCTGATTTC +
Preference number: 4 (lower is better)
Translates to: WVLEVPILHSLDPKAQVKFLPHS*ATASDF
Trigger: GAAATCAGAGGCAGTGGCTCAGCTATGGGGTAAAAA...TTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp CCTCCCTTGACGAAGCCATATGGATGCTTATGTGAGGAGGATGCATCACCTTTTCCAGGGAACATTTGGTaGTGTCTAGAGACATTTTGC +
Preference number: 4 (lower is better)
Translates to: PPLTKPYGCLCEEDASPFPGNIW*CLETFC
Trigger: GCAAAATGTCTCTAGACATCACCAAATGTTCCCTGG...AAAAGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp GAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGTCTCATCTGGGGTTCTaGAAAGAAGCTCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: ESPHHKEHSGQKCQLCRLSHLGF*KEAPLA
Trigger: AGCTAGAGGAGCTTCTTTTCAGAACCCCAGATGAGA...CAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp TTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTGTCCCTGACAAAGAAACCCACTGGAAACATTaGACGTGGAGTAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LGHGNLEVRPLFLVPDKETHWKH*TWSSCL
Trigger: CAGACAGCTACTCCACGTGCAATGTTTCCAGTGGGT...TTCTTTGTCAGGGACAAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR GCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATATTGGTGTCCAGGAGGTaGTGGAGCCACTCCCACACC +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTILVSRR*WSHSHT
Trigger: GGTGTGGGAGTGGCTCCAGCACCTCCTGGACACCAA...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp TCTTTCTTGTCCCTGACAAAGAATCCTGTCATCTGCAGAATCTCTATTCTTCCAACTCCTGCAAACTCATaGTGCAGAGGTGCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: SFLSLTKNPVICRISILPTPANS*CRGARR
Trigger: ACGGCGAGCACCTCTGCAGCATGAGTTTGCAGGAGT...TGGAAGAATAGAGATTCTGCAGATGACAGGATTCTTTGTCAGGGACAAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR GCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGCCCGGGTGAACTCCTaGAAACTCATGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREARVNS*KLMLQR
Trigger: CCTCTGCAGCATGAGTTTGCAGGAGTTCACCCGGGC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGGCCCGGGTGAACTCCTaGAAACTCATGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVARVNS*KLMLQR
Trigger: CCTCTGCAGCATGAGTTTGCAGGAGTTCACCCGGGC...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CCTCCCTTGACGAAGCCATATGGATGCTTATGTGAGGAGGATGCATCACCTTTTACGAAGCCATATGGATaGTTATGTGAGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: PPLTKPYGCLCEEDASPFTKPYG*LCEEDA
Trigger: TGCATCCTCCTCACATAAGCATCCATATGGCTTCGT...AAAAGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp ATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCAAATCAAGGGCAAATTTaGCACCCCCAGGGAACATTT +
Preference number: 4 (lower is better)
Translates to: ILHSLDPKAQVKLPGIHPNQGQI*HPQGTF
Trigger: AAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATT...TGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp ATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCAGTGACTCTGCTACTGTaGTACCATAGTTGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: ILHSLDPKAQVKLPGIHPVTLLL*YHSWCH
Trigger: ATGACACCAACTATGGTAGCACAGTAGCAGAGTCAC...TGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450654.6
CDS-3UTR CCA 90 bp AGATGCCAAGAAACCTTCACTCTCAACAAACAACACAATCCACTAATTATCTGTGCTGTCTGTCCAGGCTaGCGGCTGGTGAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RCQETFTLNKQHNPLIICAVCPG*RLVKEV
Trigger: AACCTCCTTCACCAGCCGCCAGCCTGGACAGACAGC...ACAGATAATTAGTGGATTGTGTTGTTTGTTGAGAGTGAAGGTTTCTTGGCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGCTGTCTGTCCAGGCTaGCGGCTGGTGAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIAVCPG*RLVKEV
Trigger: AACCTCCTTCACCAGCCGCCAGCCTGGACAGACAGC...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp TTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTGTCCCTGACAAAGAATGGAAACATTGCACGTaGAGTAGCTGTCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGHGNLEVRPLFLVPDKEWKHCT*SSCLSR
Trigger: CCTGGACAGACAGCTACTCCACGTGCAATGTTTCCA...TTCTTTGTCAGGGACAAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATGGCATCCAGCTGGTTaGTGTCCAGGAGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREWHPAG*CPGGAG
Trigger: TCCAGCACCTCCTGGACACCAACCAGCTGGATGCCA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGTGGCATCCAGCTGGTTaGTGTCCAGGAGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVWHPAG*CPGGAG
Trigger: TCCAGCACCTCCTGGACACCAACCAGCTGGATGCCA...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp GAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGACATTGTGTGTGGACTaGAACAGGTCACTACTGCAC +
Preference number: 4 (lower is better)
Translates to: ESPHHKEHSGQKCQLCRLTLCVD*NRSLLH
Trigger: GTGCAGTAGTGACCTGTTCCAGTCCACACACAATGT...CAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp CCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTTTGTCCTAACCATCTGGATTATAGCCAACCTTaGGTTTTGGAAGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: PKAQVKLPGIHPLCPNHLDYSQP*VLEVPI
Trigger: AATGGGGACTTCCAAAACCCAAGGTTGGCTATAATC...CAGATGGTTAGGACAAAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCATTGCGTTATCACAGCTaGGGGGTTTCTGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: ETLDYRDTRANSSAISTPLRYHS*GVSGVK
Trigger: CTTGACACCAGAAACCCCCCAGCTGTGATAACGCAA...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp AGACCAATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATGGCTCCCTTTCAACACTGTaGTGGGAAGTACTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: RPMCSKENSQPGSPFSDGSLSTL*WEVLCY
Trigger: GTAACAGAGTACTTCCCACCACAGTGTTGAAAGGGA...GCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCTGTTGCTTATGCCCCTaGGAGCCAGAGCCTTACTTA +
Preference number: 4 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSCCLCP*EPEPYL
Trigger: TAAGTAAGGCTCTGGCTCCCAGGGGCATAAGCAACA...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTAGCTCCTCACACATATaGGCCCATGCCGTGCACATA +
Preference number: 4 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTSSSHI*AHAVHI
Trigger: TATGTGCACGGCATGGGCCCATATGTGTGAGGAGCT...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CAA 72 bp TTTTCAAAGTGTCTACTTATTCCTGTGCTTCCCAGATaGCATGGCTCAATGGTAAGTCTCCAGGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: FSKCLLIPVLPR*HGSMVSLQDPQ
Trigger: CTGGGGGTCCTGGAGACTTACCATTGAGCCATGCAATCTGGGAAGCACAGGAATAAGTAGACACTTTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp TCTTTCTTGTCCCTGACAAAGAATCCTGTCATCTGCAGAATCTCTATTCTTCCAGGTTGTTGCCGGGGTTaGGATTCATTACACCACCTC +
Preference number: 4 (lower is better)
Translates to: SFLSLTKNPVICRISILPGCCRG*DSLHHL
Trigger: GAGGTGGTGTAATGAATCTCAACCCCGGCAACAACC...TGGAAGAATAGAGATTCTGCAGATGACAGGATTCTTTGTCAGGGACAAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR TCA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTCTGATTTCAAGAACCTaGAGACGCCCTCAGATCGGT +
Preference number: 4 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTLISRT*RRPQIG
Trigger: ACCGATCTGAGGGCGTCTTCAGGTTCTTGAAATCAG...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCTTTTTACCCCATAGCTaGGCCACTGCCTCTGATTTC +
Preference number: 4 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSFLPHS*ATASDF
Trigger: GAAATCAGAGGCAGTGGCTCAGCTATGGGGTAAAAA...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp CTGGTGGTTCTCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTGATCAGATAAACCATTCCTaGATGAGTATAAAGACCCCA +
Preference number: 4 (lower is better)
Translates to: LVVLNQGQICHPQGTFGDQINHS*MSIKTP
Trigger: TGGGGTCTTTATACTCATTCAGGAATGGTTTATCTG...ATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGAGAACCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp CTGGTGGTTCTCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTGATTGGGATCAGTTCAGATaGGACAGTAAACAGATAATC +
Preference number: 4 (lower is better)
Translates to: LVVLNQGQICHPQGTFGDWDQFR*DSKQII
Trigger: GATTATCTGTTTACTGTCTCATCTGAACTGATCCCA...ATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGAGAACCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp CCATGTGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGACTTTGCTCTCCCTTTTTCTGCAGGAATGTCTaGGTTGCACAGTCAAGATCG +
Preference number: 4 (lower is better)
Translates to: PCVPKRKEGLSIRLCSPFFCRNV*VAQSRS
Trigger: CGATCTTGACTGTGCAACTCAGACATTCCTGCAGAA...AAAGGGAGAGCAAAGTCTTATGGATAAACCCTCCTTTCTTTTGGGGACACATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTTCTATCAGCCTCAGATaGTTTGAGCCTGGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQISISLR*FEPGKV
Trigger: GACTTTACCAGGCTCAAATCATCTGAGGCTGATAGA...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp TGGGTTTTGGAAGTCCCCATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAACTTTTTCATATCAGGTaGCTCTGCTACTGTGCTACC +
Preference number: 4 (lower is better)
Translates to: WVLEVPILHSLDPKAQVKLFHIR*LCYCAT
Trigger: GGTAGCACAGTAGCAGAGTCACCTGATATGAAAAAG...TTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450654.6
CDS-3UTR GCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACTCATGCTGCAGAGGTaGTCGCCGTTGATGTCGAAC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRELMLQR*SPLMSN
Trigger: GTTCGACATCAACGGCGAGCACCTCTGCAGCATGAG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGCTCATGCTGCAGAGGTaGTCGCCGTTGATGTCGAAC +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVLMLQR*SPLMSN
Trigger: GTTCGACATCAACGGCGAGCACCTCTGCAGCATGAG...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CAGATAAGTCTCACAGTTCCCAATAAGGCAACAGAATCCTCATCCAACATATATACTCCTGCAAACTCATaGTGCAGAGGTGCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: QISLTVPNKATESSSNIYTPANS*CRGARR
Trigger: ACGGCGAGCACCTCTGCAGCATGAGTTTGCAGGAGT...ATATATGTTGGATGAGGATTCTGTTGCCTTATTGGGAACTGTGAGACTTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAACTCCTGCAAACTCATaGTGCAGAGGTGCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRETPANS*CRGARR
Trigger: ACGGCGAGCACCTCTGCAGCATGAGTTTGCAGGAGT...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGCCCGGGTGAACTCCTaGAAACTCATGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIARVNS*KLMLQR
Trigger: CCTCTGCAGCATGAGTTTGCAGGAGTTCACCCGGGC...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATCAGATGCTGCAAGTTaGTGTAGAGGAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRESDAAS*CRGAAP
Trigger: CGGGGCAGCTCCTCTACAGCAACTTGCAGCATCTGA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTTTGTCCTAACCATCTGCAAGTCATGTGGTTATaGAGAGATTATAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: PKAQVKLPGIHPLCPNHLQVMWL*RDYSQP
Trigger: AGGTTGGCTATAATCTCTGCATAACCACATGACTTG...CAGATGGTTAGGACAAAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp CCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTTTGTCCTAACCATCTGCCTTTGAATATGAATTaGTCACCTCTACCAGGTATG +
Preference number: 4 (lower is better)
Translates to: PKAQVKLPGIHPLCPNHLPLNMN*SPLPGM
Trigger: CATACCTGGTAGAGGTGAGCAATTCATATTCAAAGG...CAGATGGTTAGGACAAAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp GAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGCAGGAATGTCTGAGTTaGACAGTCAAGATCGTTGCT +
Preference number: 4 (lower is better)
Translates to: ESPHHKEHSGQKCQLCRLQECLS*TVKIVA
Trigger: AGCAACGATCTTGACTGTGCAACTCAGACATTCCTG...CAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp CCTCCCTTGACGAAGCCATATGGATGCTTATGTGAGGAGGATGCATCACCTTTTCTTGAATGGAAAGGTTaGAGAAAGAGCCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PPLTKPYGCLCEEDASPFLEWKG*RKSQSQ
Trigger: TTGGCTTTGGCTCTTTCTGCAACCTTTCCATTCAAG...AAAAGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp TCACACAACTCAGACACACACACAGACACACAAATATTCATGCGTTATACCCATAGAAACTGTTGCTTATaGCCCTGGGAGCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SHNSDTHTDTQIFMRYTHRNCCL*PWEPEP
Trigger: AGGCTCTGGCTCCCAGGGGCATAAGCAACAGTTTCT...ATGGGTATAACGCATGAATATTTGTGTGTCTGTGTGTGTGTCTGAGTTGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTTGGAAACATTGCACGTaGAGTAGCTGTCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTWKHCT*SSCLSR
Trigger: CCTGGACAGACAGCTACTCCACGTGCAATGTTTCCA...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCAACATTGTGTGTGGACTaGAACAGGTCACTACTGCAC +
Preference number: 4 (lower is better)
Translates to: ETLDYRDTRANSSAISTPTLCVD*NRSLLH
Trigger: GTGCAGTAGTGACCTGTTCCAGTCCACACACAATGT...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGACTGGTGGTTGTCATaGAGATCTGAGCCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREDWWLS*RSEPGR
Trigger: TCTGCCGGGCTCAGATCTCCATGACAACCACCAGTC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGGACTGGTGGTTGTCATaGAGATCTGAGCCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVDWWLS*RSEPGR
Trigger: TCTGCCGGGCTCAGATCTCCATGACAACCACCAGTC...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257831.8
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp GAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGCCATTCTCCACTCATTaGATCCTAAGGCTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: ESPHHKEHSGQKCQLCRLPFSTH*ILRLRL
Trigger: TAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGG...CAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTTTGCGTTATCACAGCTaGGGGGTTTCTGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTLRYHS*GVSGVK
Trigger: CTTGACACCAGAAACCCCCCAGCTGTGATAACGCAA...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCAGCTTCCCAGATTGCATaGCTCAATGGTAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ETLDYRDTRANSSAISTPASQIA*LNGKSP
Trigger: TGGAGACTTACCATTGAGCCATGCAATCTGGGAAGC...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTGGAAAACTCACAACCTaGGTCTCCCTTCTCAGATGG +
Preference number: 4 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTGKLTT*VSLLRW
Trigger: CCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCC...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CAA 72 bp CCCTGGAATTTAACTCAGCAACAATGTTCACCTCCCTaGACGAAGCCATATGGATGCTTATGTGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PWNLTQQQCSPP*TKPYGCLCEED
Trigger: ATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGGTGAACATTGTTGCTGAGTTAAATTCCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CAA 72 bp TCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTaGGTGATGTCTAGAGACATTTTGCGTTATCACAGC +
Preference number: 4 (lower is better)
Translates to: SIKGKFATPREH*VMSRDILRYHS
Trigger: GCTGTGATAACGCAAAATGTCTCTAGACATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CAA 72 bp TGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGACTTaGCTCTCCCTTTCAACACTGTGGTGGGAAGTACTC +
Preference number: 4 (lower is better)
Translates to: CPQKKGGFIHKT*LSLSTLWWEVL
Trigger: GAGTACTTCCCACCACAGTGTTGAAAGGGAGAGCAAAGTCTTATGGATAAACCCTCCTTTCTTTTGGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGGTTGTTGCCGGGGTTaGGATTCATTACACCACCTC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREGCCRG*DSLHHL
Trigger: GAGGTGGTGTAATGAATCTCAACCCCGGCAACAACC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGGGTTGTTGCCGGGGTTaGGATTCATTACACCACCTC +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVGCCRG*DSLHHL
Trigger: GAGGTGGTGTAATGAATCTCAACCCCGGCAACAACC...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGAGAGGTGCTCGCCGTTaGTGTCGAACTCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVRGARR*CRTLGK
Trigger: CTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCT...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAAGAGGTGCTCGCCGTTaGTGTCGAACTCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRERGARR*CRTLGK
Trigger: CTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCT...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATCTGCAACAGGAAGGTaGCTGGTGGTTGTCATGGAG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRESATGR*LVVVME
Trigger: CTCCATGACAACCACCAGTCACCTTCCTGTTGCAGA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTAATGTTCACCTCCCTTaGCGAAGCCATATGGATGCT +
Preference number: 4 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTNVHLP*RSHMDA
Trigger: AGCATCCATATGGCTTCGTCAAGGGAGGTGAACATT...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCACCACCATCCTCATATTaGCTAGCTAAACTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: ETLDYRDTRANSSAISTPPPSSY*LAKLVV
Trigger: AACCACCAGTTTAGCTAGTCAATATGAGGATGGTGG...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp GGTTGCAGAAAGAGCCAAAGCCAATTTGGAAGAAGTGAGAAACTTACAGGTTTGTCTCATCTGGGGTTCTaGAAAGAAGCTCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: GCRKSQSQFGRSEKLTGLSHLGF*KEAPLA
Trigger: AGCTAGAGGAGCTTCTTTTCAGAACCCCAGATGAGA...CAAACCTGTAAGTTTCTCACTTCTTCCAAATTGGCTTTGGCTCTTTCTGCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp CCATGTGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGACTTTGCTCTCCCTTTAGCAAGCCAAGGACATaGGAGAGCCAAAAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: PCVPKRKEGLSIRLCSPFSKPRT*ESQKEK
Trigger: CTTTTCTTTTTGGCTCTCTCATGTCCTTGGCTTGCT...AAAGGGAGAGCAAAGTCTTATGGATAAACCCTCCTTTCTTTTGGGGACACATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp AGACCAATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATGGCCCAATTTGGAAGAAGTaGGAAACTTACAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RPMCSKENSQPGSPFSDGPIWKK*ETYRFE
Trigger: CTCAAACCTGTAAGTTTCTCACTTCTTCCAAATTGG...GCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp TTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTGTCCCTGACAAAGAAATGGTAATTTGGAGGTaGGACCACTCTTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LGHGNLEVRPLFLVPDKEMVIWR*DHSFLS
Trigger: GGACAAGAAAGAGTGGTCTCACCTCCAAATTACCAT...TTCTTTGTCAGGGACAAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR GCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAACTCCTGCAAACTCATaGTGCAGAGGTGCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTITPANS*CRGARR
Trigger: ACGGCGAGCACCTCTGCAGCATGAGTTTGCAGGAGT...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATATCAGATGCTGCAAGTTaGTGTAGAGGAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTISDAAS*CRGAAP
Trigger: CGGGGCAGCTCCTCTACAGCAACTTGCAGCATCTGA...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGGAACAGGTCACTACTaGACTGGCCGTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREGTGHY*TGRSTS
Trigger: TGAAGTGGAACGGCCAGTGCAGTAGTGACCTGTTCC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGGGAACAGGTCACTACTaGACTGGCCGTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVGTGHY*TGRSTS
Trigger: TGAAGTGGAACGGCCAGTGCAGTAGTGACCTGTTCC...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTTTGTCCTAACCATCTGGCTTTTCATAGGTCATaGTGCTGTTGTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PKAQVKLPGIHPLCPNHLAFHRS*CCCSSF
Trigger: AAAAGAAGAACAACAGCAGCATGACCTATGAAAAGC...CAGATGGTTAGGACAAAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCGTCTACTTATTCCTGTaGTTCCCAGATTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSVYLFL*FPDCMA
Trigger: AGCCATGCAATCTGGGAAGCACAGGAATAAGTAGAC...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGACTGGTGGTTGTCATaGAGATCTGAGCCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIDWWLS*RSEPGR
Trigger: TCTGCCGGGCTCAGATCTCCATGACAACCACCAGTC...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257831.8
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGTCCTGGGTTCTTGTCTaGGTTCAAGAGGATGTCGCG +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVSWVLV*VQEDVA
Trigger: CGCGACATCCTCTTGAACCCAGACAAGAACCCAGGA...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATCCTGGGTTCTTGTCTaGGTTCAAGAGGATGTCGCG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRESWVLV*VQEDVA
Trigger: CGCGACATCCTCTTGAACCCAGACAAGAACCCAGGA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp AGAAGTGAGCAGACAGGGCAATTAAAGTATTTCACCAACCATCCAAAGGGGAGAAAAGGAAGACAGCCCTaGCATCAGATAAACCATTCC +
Preference number: 4 (lower is better)
Translates to: RSEQTGQLKYFTNHPKGRKGRQP*HQINHS
Trigger: GGAATGGTTTATCTGATGCCAGGGCTGTCTTCCTTT...TCTCCCCTTTGGATGGTTGGTGAAATACTTTAATTGCCCTGTCTGCTCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp CCTCCCTTGACGAAGCCATATGGATGCTTATGTGAGGAGGATGCATCACCTTTTGTTAGAGACCATGAGTaGATACTGCTGAACATCTTA +
Preference number: 4 (lower is better)
Translates to: PPLTKPYGCLCEEDASPFVRDHE*ILLNIL
Trigger: TAAGATGTTCAGCAGTATCCACTCATGGTCTCTAAC...AAAAGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp ATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCAGAGCACTCCTTCTTATaGATACATGTCTTCATTTGC +
Preference number: 4 (lower is better)
Translates to: ILHSLDPKAQVKLPGIHPEHSFL*IHVFIC
Trigger: GCAAATGAAGACATGTATCCATAAGAAGGAGTGCTC...TGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCAGGCCCCATAGTTCTTTaGCCTTCTTGTAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: ETLDYRDTRANSSAISTPGPIVL*PSCKAT
Trigger: TGTTGCTTTACAAGAAGGCCAAAGAACTATGGGGCC...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp AGAAGTGAGCAGACAGGGCAATTAAAGTATTTCACCAACCATCCAAAGGGGAGATGTTTAGTGACCATGTaGACATTCAGCACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RSEQTGQLKYFTNHPKGRCLVTM*TFSTGE
Trigger: CTCACCTGTGCTGAATGTCCACATGGTCACTAAACA...TCTCCCCTTTGGATGGTTGGTGAAATACTTTAATTGCCCTGTCTGCTCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
3UTR CAA 72 bp ATGTGGTTATGCAGAGATTATAGCCAACCTTGGGTTTaGGAAGTCCCCATTCTCCACTCATTGGATCCTAAG +
Preference number: 4 (lower is better)
Translates to: MWLCRDYSQPWV*EVPILHSLDPK
Trigger: CTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCAAGGTTGGCTATAATCTCTGCATAACCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CAA 72 bp CAAAGCCAATTTGGAAGAAGTGAGAAACTTACAGGTTaGAGGAATGGTGAAGTCAGCGAAGGATCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: QSQFGRSEKLTG*RNGEVSEGSSL
Trigger: GAGGCTAGATCCTTCGCTGACTTCACCATTCCTCAAACCTGTAAGTTTCTCACTTCTTCCAAATTGGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAAGAGGTGCTCGCCGTTaGTGTCGAACTCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIRGARR*CRTLGK
Trigger: CTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCT...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGTTGTCATGGAGATCTaGGCCCGGCAGAAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREVVMEI*ARQKVL
Trigger: CAAAACTTTCTGCCGGGCTCAGATCTCCATGACAAC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGGTTGTCATGGAGATCTaGGCCCGGCAGAAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVVVMEI*ARQKVL
Trigger: CAAAACTTTCTGCCGGGCTCAGATCTCCATGACAAC...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257831.8
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATATCTGCAACAGGAAGGTaGCTGGTGGTTGTCATGGAG +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTISATGR*LVVVME
Trigger: CTCCATGACAACCACCAGTCACCTTCCTGTTGCAGA...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257831.8
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAATGAATTCCCATAAGTaGGTCCCTCTCGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREMNSHK*VPLGLC
Trigger: GCACAACCCGAGAGGGACTCACTTATGGGAATTCAT...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAAGAGGATGTCGCGGATaGATTCCCATAAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRERGCRG*IPISES
Trigger: GGACTCACTTATGGGAATTCATCCGCGACATCCTCT...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGAGAGGATGTCGCGGATaGATTCCCATAAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVRGCRG*IPISES
Trigger: GGACTCACTTATGGGAATTCATCCGCGACATCCTCT...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACTGATTTCAAGAACCTaGAGACGCCCTCAGATCGGT +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRELISRT*RRPQIG
Trigger: ACCGATCTGAGGGCGTCTTCAGGTTCTTGAAATCAG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACTGAGCCACTGCCTCTaGTTTCAAGAACCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRELSHCL*FQEPED
Trigger: GTCTTCAGGTTCTTGAAATCAGAGGCAGTGGCTCAG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CCATGTGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGACTTTGCTCTCCCTTTTATGCTTACTTTATCTaGCATTGGCTCTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: PCVPKRKEGLSIRLCSPFYAYFI*HWLSSG
Trigger: CCCAGATGAGAGCCAATGTCAGATAAAGTAAGCATA...AAAGGGAGAGCAAAGTCTTATGGATAAACCCTCCTTTCTTTTGGGGACACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp GAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGTCTAGTTCCAGAAACTaGATTCCAAGAAGCTACACT +
Preference number: 4 (lower is better)
Translates to: ESPHHKEHSGQKCQLCRLSSSRN*IPRSYT
Trigger: AGTGTAGCTTCTTGGAATTCAGTTTCTGGAACTAGA...CAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp TTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTGTCCCTGACAAAGAAACTCTTTCTTGTCCCTaGCAAAGAATCCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: LGHGNLEVRPLFLVPDKETLSCP*QRILSS
Trigger: AGATGACAGGATTCTTTGTCAGGGACAAGAAAGAGT...TTCTTTGTCAGGGACAAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACTTCACAGAAAACTCTaGCTAGGACGTGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRELHRKL*LGRGVG
Trigger: GCCAACTCCACGTCCTAGTCAGAGTTTTCTGTGAAG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531794.5
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATCCCTGTTACCAAGGTaGGTGCAGATAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRESLLPR*VQITSR
Trigger: TCTGCTGGTTATCTGCACTCACCTTGGTAACAGGGA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533754.5
CDS-3UTR GCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGACCCACTGGAAACATTaGACGTGGAGTAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVTHWKH*TWSSCL
Trigger: CAGACAGCTACTCCACGTGCAATGTTTCCAGTGGGT...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAACCCACTGGAAACATTaGACGTGGAGTAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRETHWKH*TWSSCL
Trigger: CAGACAGCTACTCCACGTGCAATGTTTCCAGTGGGT...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGGAACAGGTCACTACTaGACTGGCCGTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIGTGHY*TGRSTS
Trigger: TGAAGTGGAACGGCCAGTGCAGTAGTGACCTGTTCC...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTTTGTCCTAACCATCTGTTTCATAGGTCATGCTaGTGTTGTTCTTCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: PKAQVKLPGIHPLCPNHLFHRSC*CCSSFY
Trigger: GTAAAAAGAAGAACAACAGCAGCATGACCTATGAAA...CAGATGGTTAGGACAAAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp TGGGTTTTGGAAGTCCCCATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAATTGAGGTTGAAGTCTTaGTTTTGCTTCACTCTAAGG +
Preference number: 4 (lower is better)
Translates to: WVLEVPILHSLDPKAQVKLRLKS*FCFTLR
Trigger: CCTTAGAGTGAAGCAAAAGCAAGACTTCAACCTCAA...TTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATGGAAACATTGCACGTaGAGTAGCTGTCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREWKHCT*SSCLSR
Trigger: CCTGGACAGACAGCTACTCCACGTGCAATGTTTCCA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATATCCTGGGTTCTTGTCTaGGTTCAAGAGGATGTCGCG +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTISWVLV*VQEDVA
Trigger: CGCGACATCCTCTTGAACCCAGACAAGAACCCAGGA...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp CTGGTGGTTCTCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTGATATTTGGTGTGTGTTTTaGTTTGTGTCCAAAGTATTG +
Preference number: 4 (lower is better)
Translates to: LVVLNQGQICHPQGTFGDIWCVF*FVSKVL
Trigger: CAATACTTTGGACACAAACCAAAACACACACCAAAT...ATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGAGAACCACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCGATTATAGCCAACCTTaGGTTTTGGAAGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSDYSQP*VLEVPI
Trigger: AATGGGGACTTCCAAAACCCAAGGTTGGCTATAATC...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp TGGGTTTTGGAAGTCCCCATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAACAGATTGAGAAACCTTaGACTATAGGGATACAAGAG +
Preference number: 4 (lower is better)
Translates to: WVLEVPILHSLDPKAQVKQIEKP*TIGIQE
Trigger: CTCTTGTATCCCTATAGTCCAAGGTTTCTCAATCTG...TTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTCTTTCAACACTGTGGTaGGAAGTACTCTGTTACCAC +
Preference number: 4 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTLSTLW*EVLCYH
Trigger: GTGGTAACAGAGTACTTCCCACCACAGTGTTGAAAG...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAACACTCCCACCATCCTaGGAGCATGGTAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRETLPPS*EHGKSA
Trigger: TGCTGATTTACCATGCTCCCAGGATGGTGGGAGTGT...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533754.5
3UTR CAA 72 bp GTTCCTGCTACATTACTATGCTTACTTTATCTGACATaGGCTCTCATCTGGGGTTCTGAAAAGAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VPATLLCLLYLT*ALIWGSEKKLL
Trigger: GAGGAGCTTCTTTTCAGAACCCCAGATGAGAGCCAATGTCAGATAAAGTAAGCATAGTAATGTAGCAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAATGAATTCCCATAAGTaGGTCCCTCTCGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIMNSHK*VPLGLC
Trigger: GCACAACCCGAGAGGGACTCACTTATGGGAATTCAT...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATACTGATTTCAAGAACCTaGAGACGCCCTCAGATCGGT +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTILISRT*RRPQIG
Trigger: ACCGATCTGAGGGCGTCTTCAGGTTCTTGAAATCAG...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp AGATGCCAAGAAACCTTCACTCTCAACAAACAACACAATCCACTAATTATCTGTCTGAGCCACTGCCTCTaGTTTCAAGAACCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: RCQETFTLNKQHNPLIICLSHCL*FQEPED
Trigger: GTCTTCAGGTTCTTGAAATCAGAGGCAGTGGCTCAG...ACAGATAATTAGTGGATTGTGTTGTTTGTTGAGAGTGAAGGTTTCTTGGCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATACTGAGCCACTGCCTCTaGTTTCAAGAACCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTILSHCL*FQEPED
Trigger: GTCTTCAGGTTCTTGAAATCAGAGGCAGTGGCTCAG...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATTTTTACCCCATAGCTaGGCCACTGCCTCTGATTTC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREFLPHS*ATASDF
Trigger: GAAATCAGAGGCAGTGGCTCAGCTATGGGGTAAAAA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGTTTTTACCCCATAGCTaGGCCACTGCCTCTGATTTC +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVFLPHS*ATASDF
Trigger: GAAATCAGAGGCAGTGGCTCAGCTATGGGGTAAAAA...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp TCACACAACTCAGACACACACACAGACACACAAATATTCATGCGTTATACCCATCCACCATCCTCATATTaGCTAGCTAAACTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SHNSDTHTDTQIFMRYTHPPSSY*LAKLVV
Trigger: AACCACCAGTTTAGCTAGTCAATATGAGGATGGTGG...ATGGGTATAACGCATGAATATTTGTGTGTCTGTGTGTGTGTCTGAGTTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTTATGCTTACTTTATCTaGCATTGGCTCTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTYAYFI*HWLSSG
Trigger: CCCAGATGAGAGCCAATGTCAGATAAAGTAAGCATA...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp AGAAGTGAGCAGACAGGGCAATTAAAGTATTTCACCAACCATCCAAAGGGGAGATGGGATCAGTTCAGATaGGACAGTAAACAGATAATC +
Preference number: 4 (lower is better)
Translates to: RSEQTGQLKYFTNHPKGRWDQFR*DSKQII
Trigger: GATTATCTGTTTACTGTCTCATCTGAACTGATCCCA...TCTCCCCTTTGGATGGTTGGTGAAATACTTTAATTGCCCTGTCTGCTCACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATTTCACAAAGCAGCCTaGGCCAAAACCAATCTCCAC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREFHKAA*AKTNLH
Trigger: GTGGAGATTGGTTTTGGCTCAGGCTGCTTTGTGAAA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531794.5
CDS-3UTR TCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATACTCCTTCCAGAATCATaGTCTCCATGGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTILLPES*SPWLQN
Trigger: GTTCTGCAGCCATGGAGATCATGATTCTGGAAGGAG...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533754.5
CDS-3UTR GCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAACCCACTGGAAACATTaGACGTGGAGTAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTITHWKH*TWSSCL
Trigger: CAGACAGCTACTCCACGTGCAATGTTTCCAGTGGGT...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp TGGGTTTTGGAAGTCCCCATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAAGCTTTTCATAGGTCATaGTGCTGTTGTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: WVLEVPILHSLDPKAQVKAFHRS*CCCSSF
Trigger: AAAAGAAGAACAACAGCAGCATGACCTATGAAAAGC...TTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp CCTCCCTTGACGAAGCCATATGGATGCTTATGTGAGGAGGATGCATCACCTTTTATAAGAATTAATACCTaGAAAGAGGATTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPLTKPYGCLCEEDASPFIRINT*KEDFPW
Trigger: CCAGGGAAAATCCTCTTTGCAGGTATTAATTCTTAT...AAAAGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp AGACCAATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATGGCTCATTTGCATATTATTaGTGGAGAAAGAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RPMCSKENSQPGSPFSDGSFAYY*WRKRGR
Trigger: TCTACCTCTCTTTCTCCAGCAATAATATGCAAATGA...GCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTCACAGTCAAGATCGTTaGTGTTCATTGTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQIHSQDR*CSLFFF
Trigger: GAAAAAGAACAATGAACAGCAACGATCTTGACTGTG...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp GGTTGCAGAAAGAGCCAAAGCCAATTTGGAAGAAGTGAGAAACTTACAGGTTTGAAGGTTGTGCCGTTGTaGTCTTATTCCACTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GCRKSQSQFGRSEKLTGLKVVPL*SYSTEE
Trigger: TTCTTCAGTGGAATAAGAGCACAACGGCACAACCTT...CAAACCTGTAAGTTTCTCACTTCTTCCAAATTGGCTTTGGCTCTTTCTGCAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCCATACAGTAAGTATCTaGCCAATACGTAACTACCGA +
Preference number: 4 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSHTVSI*PIRNYR
Trigger: TCGGTAGTTACGTATTGGGCAGATACTTACTGTATG...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATATGGAAACATTGCACGTaGAGTAGCTGTCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIWKHCT*SSCLSR
Trigger: CCTGGACAGACAGCTACTCCACGTGCAATGTTTCCA...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAACATTGTGTGTGGACTaGAACAGGTCACTACTGCAC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRETLCVD*NRSLLH
Trigger: GTGCAGTAGTGACCTGTTCCAGTCCACACACAATGT...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp CCATGTGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGACTTTGCTCTCCCTTTAACCATCTGAGACCCTaGAATTTAACTCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: PCVPKRKEGLSIRLCSPFNHLRP*NLTQQQ
Trigger: TTGTTGCTGAGTTAAATTCCAGGGTCTCAGATGGTT...AAAGGGAGAGCAAAGTCTTATGGATAAACCCTCCTTTCTTTTGGGGACACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp TCACACAACTCAGACACACACACAGACACACAAATATTCATGCGTTATACCCATCCATTCTCCACTCATTaGATCCTAAGGCTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SHNSDTHTDTQIFMRYTHPFSTH*ILRLRL
Trigger: TAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGG...ATGGGTATAACGCATGAATATTTGTGTGTCTGTGTGTGTGTCTGAGTTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCGTTAGAGACCATGAGTaGATACTGCTGAACATCTTA +
Preference number: 4 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSVRDHE*ILLNIL
Trigger: TAAGATGTTCAGCAGTATCCACTCATGGTCTCTAAC...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACTTTCCAGGTGTTCATaGTGGAAGGCTCAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRELSRCS*WKAQFV
Trigger: AACAAACTGAGCCTTCCATCATGAACACCTGGAAAG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGCTTTCCAGGTGTTCATaGTGGAAGGCTCAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVLSRCS*WKAQFV
Trigger: AACAAACTGAGCCTTCCATCATGAACACCTGGAAAG...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACTTTTTCATATCAGGTaGCTCTGCAACAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRELFHIR*LCNRKV
Trigger: CACCTTCCTGTTGCAGAGTCACCTGATATGAAAAAG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGCTTTTTCATATCAGGTaGCTCTGCAACAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVLFHIR*LCNRKV
Trigger: CACCTTCCTGTTGCAGAGTCACCTGATATGAAAAAG...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000257831.8
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATATTTTTACCCCATAGCTaGGCCACTGCCTCTGATTTC +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIFLPHS*ATASDF
Trigger: GAAATCAGAGGCAGTGGCTCAGCTATGGGGTAAAAA...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp GTTACCACCCCAAGTTGGCATAGCTCGATTACTTTAAGTTCTCCAAGTCACGAAGAGAAAAGTAGTCTTTaGAATATTTACGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VTTPSWHSSITLSSPSHEEKSSL*NIYVQE
Trigger: CTCCTGGACGTAAATATTTCAAAGACTACTTTTCTC...TTCGTGACTTGGAGAACTTAAAGTAATCGAGCTATGCCAACTTGGGGTGGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp AGAAGTGAGCAGACAGGGCAATTAAAGTATTTCACCAACCATCCAAAGGGGAGAGAGAAAAGTAGTCTTTaGAATATTTACGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RSEQTGQLKYFTNHPKGREKSSL*NIYVQE
Trigger: CTCCTGGACGTAAATATTTCAAAGACTACTTTTCTC...TCTCCCCTTTGGATGGTTGGTGAAATACTTTAATTGCCCTGTCTGCTCACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp TCACACAACTCAGACACACACACAGACACACAAATATTCATGCGTTATACCCATATATGGATGCTTATGTaGGGAGGATGCATCACCTTT +
Preference number: 4 (lower is better)
Translates to: SHNSDTHTDTQIFMRYTHIWMLM*GGCITF
Trigger: AAAGGTGATGCATCCTCCTCACATAAGCATCCATAT...ATGGGTATAACGCATGAATATTTGTGTGTCTGTGTGTGTGTCTGAGTTGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAAATGTTCACCTCCCTTaGCGAAGCCATATGGATGCT +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTINVHLP*RSHMDA
Trigger: AGCATCCATATGGCTTCGTCAAGGGAGGTGAACATT...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGTCATCCAACATATATTaGCTTGTGGAACCCAACGGC +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVSSNIY*LVEPNG
Trigger: GCCGTTGGGTTCCACAAGTCAATATATGTTGGATGA...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACCCGGCAGAAAGTTTTaGTGTCCAACAAATCTACTG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREPGRKF*CPTNLL
Trigger: CAGTAGATTTGTTGGACAGCAAAACTTTCTGCCGGG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGACGAAGCCATATGGATaGTTATGTGAGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVTKPYG*LCEEDA
Trigger: TGCATCCTCCTCACATAAGCATCCATATGGCTTCGT...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp CAGATAAGTCTCACAGTTCCCAATAAGGCAACAGAATCCTCATCCAACATATATAATCAAGGGCAAATTTaGCACCCCCAGGGAACATTT +
Preference number: 4 (lower is better)
Translates to: QISLTVPNKATESSSNIYNQGQI*HPQGTF
Trigger: AAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATT...ATATATGTTGGATGAGGATTCTGTTGCCTTATTGGGAACTGTGAGACTTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp TGGGTTTTGGAAGTCCCCATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAAATAAGAATTAATACCTaGAAAGAGGATTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: WVLEVPILHSLDPKAQVKIRINT*KEDFPW
Trigger: CCAGGGAAAATCCTCTTTGCAGGTATTAATTCTTAT...TTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp TCCTTCCATTTCTCTGTCTTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTAAGAATCCTGTCATCTaGAGAATCTCTATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SFHFSVLGHGNLEVRPLFKNPVI*RISILP
Trigger: TGGAAGAATAGAGATTCTGCAGATGACAGGATTCTT...AAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAAGACAGAGAAATGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR CCA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTCTGTGCTACCATAGTTaGTGTCATATAAATAGTTCT +
Preference number: 4 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQILCYHS*CHINSS
Trigger: AGAACTATTTATATGACACCAACTATGGTAGCACAG...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp GAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGATTTGGTGTGTGTTTTaGTTTGTGTCCAAAGTATTG +
Preference number: 4 (lower is better)
Translates to: ESPHHKEHSGQKCQLCRLIWCVF*FVSKVL
Trigger: CAATACTTTGGACACAAACCAAAACACACACCAAAT...CAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp GGTTGCAGAAAGAGCCAAAGCCAATTTGGAAGAAGTGAGAAACTTACAGGTTTGACATATATTGACTTGTaGAACCCAACGGCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: GCRKSQSQFGRSEKLTGLTYIDL*NPTACF
Trigger: AAAACAGGCCGTTGGGTTCCACAAGTCAATATATGT...CAAACCTGTAAGTTTCTCACTTCTTCCAAATTGGCTTTGGCTCTTTCTGCAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp TCACACAACTCAGACACACACACAGACACACAAATATTCATGCGTTATACCCATCCAGGCTGGTCTCTGTaGTTTTTATTAGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SHNSDTHTDTQIFMRYTHPGWSL*FLLVFP
Trigger: AGGAAACACTAATAAAAACCACAGAGACCAGCCTGG...ATGGGTATAACGCATGAATATTTGTGTGTCTGTGTGTGTGTCTGAGTTGTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp TCTTTCTTGTCCCTGACAAAGAATCCTGTCATCTGCAGAATCTCTATTCTTCCATCCATTTCTCTGTCTTaGGACATGGTAATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SFLSLTKNPVICRISILPSISLS*DMVIWR
Trigger: CCTCCAAATTACCATGTCCCAAGACAGAGAAATGGA...TGGAAGAATAGAGATTCTGCAGATGACAGGATTCTTTGTCAGGGACAAGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAATATGGATGCTTATGTaGGGAGGATGCATCACCTTT +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREIWMLM*GGCITF
Trigger: AAAGGTGATGCATCCTCCTCACATAAGCATCCATAT...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp CAGATAAGTCTCACAGTTCCCAATAAGGCAACAGAATCCTCATCCAACATATATTGCCTCATGTTCCCATaGAAACCTAATAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QISLTVPNKATESSSNIYCLMFP*KPNKRE
Trigger: CTCTCTCTTATTAGGTTTTCATGGGAACATGAGGCA...ATATATGTTGGATGAGGATTCTGTTGCCTTATTGGGAACTGTGAGACTTATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACTCCTTCCAGAATCATaGTCTCAGCCTGATATTTAC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRELLPES*SQPDIY
Trigger: GTAAATATCAGGCTGAGATCATGATTCTGGAAGGAG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530286.5
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATGCAGAACCAACTCCTaGATTAGACTTCCATCAGTA +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRECRTNS*IRLPSV
Trigger: TACTGATGGAAGTCTAATTCAGGAGTTGGTTCTGCA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533754.5
CDS-3UTR GCA 90 bp TCACACAACTCAGACACACACACAGACACACAAATATTCATGCGTTATACCCATCCAACAAATCTACTGTaGTACCATAGTTGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: SHNSDTHTDTQIFMRYTHPTNLL*YHSWCH
Trigger: ATGACACCAACTATGGTAGCACAGTAGATTTGTTGG...ATGGGTATAACGCATGAATATTTGTGTGTCTGTGTGTGTGTCTGAGTTGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp AGATGCCAAGAAACCTTCACTCTCAACAAACAACACAATCCACTAATTATCTGTCCCGGCAGAAAGTTTTaGTGTCCAACAAATCTACTG +
Preference number: 4 (lower is better)
Translates to: RCQETFTLNKQHNPLIICPGRKF*CPTNLL
Trigger: CAGTAGATTTGTTGGACAGCAAAACTTTCTGCCGGG...ACAGATAATTAGTGGATTGTGTTGTTTGTTGAGAGTGAAGGTTTCTTGGCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCACAAAAATGTCAATTGTaGAGATTGAGAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: ETLDYRDTRANSSAISTPQKCQL*RLRNLG
Trigger: TCCAAGGTTTCTCAATCTGCACAATTGACATTTTTG...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp GGTTGCAGAAAGAGCCAAAGCCAATTTGGAAGAAGTGAGAAACTTACAGGTTTGTTATCCATAAGACTTTaGTCTCCCTTTCAACACTGT +
Preference number: 4 (lower is better)
Translates to: GCRKSQSQFGRSEKLTGLLSIRL*SPFQHC
Trigger: ACAGTGTTGAAAGGGAGAGCAAAGTCTTATGGATAA...CAAACCTGTAAGTTTCTCACTTCTTCCAAATTGGCTTTGGCTCTTTCTGCAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCCTGTGCTACCATAGTTaGTGTCATATAAATAGTTCT +
Preference number: 4 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSLCYHS*CHINSS
Trigger: AGAACTATTTATATGACACCAACTATGGTAGCACAG...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCATTCTTGTTCCCCTCATaGTACATAAATATCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ETLDYRDTRANSSAISTPFLFPS*YINIRE
Trigger: TTCTCTGATATTTATGTACCATGAGGGGAACAAGAA...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp AGATGCCAAGAAACCTTCACTCTCAACAAACAACACAATCCACTAATTATCTGTAAAGGAAGACAGCCCTaGCATCAGATAAACCATTCC +
Preference number: 4 (lower is better)
Translates to: RCQETFTLNKQHNPLIICKGRQP*HQINHS
Trigger: GGAATGGTTTATCTGATGCCAGGGCTGTCTTCCTTT...ACAGATAATTAGTGGATTGTGTTGTTTGTTGAGAGTGAAGGTTTCTTGGCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGTTACCACCCCAAGTTaGCATAGCTCGATTACTTTA +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREVTTPS*HSSITL
Trigger: TAAAGTAATCGAGCTATGCCAACTTGGGGTGGTAAC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGCAGATAAACCATTCCTaGATGAGTATAAAGACCCCA +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVQINHS*MSIKTP
Trigger: TGGGGTCTTTATACTCATTCAGGAATGGTTTATCTG...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR TCA 90 bp TCACACAACTCAGACACACACACAGACACACAAATATTCATGCGTTATACCCATATTCATTCTATGCAATaGACAGTCAAATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SHNSDTHTDTQIFMRYTHIHSMQ*TVKCWE
Trigger: TTCCCAGCATTTGACTGTTCATTGCATAGAATGAAT...ATGGGTATAACGCATGAATATTTGTGTGTCTGTGTGTGTGTCTGAGTTGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACCAACAAATCTACTGTaGTACCATAGTTGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREPTNLL*YHSWCH
Trigger: ATGACACCAACTATGGTAGCACAGTAGATTTGTTGG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGCAAGTCATGTGGTTATaGAGAGATTATAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVQVMWL*RDYSQP
Trigger: AGGTTGGCTATAATCTCTGCATAACCACATGACTTG...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTCAAAAATGTCAATTGTaGAGATTGAGAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTQKCQL*RLRNLG
Trigger: TCCAAGGTTTCTCAATCTGCACAATTGACATTTTTG...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR GCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGTTGAGGTTGAAGTCTTaGTTTTGCTTCACTCTAAGG +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVLRLKS*FCFTLR
Trigger: CCTTAGAGTGAAGCAAAAGCAAGACTTCAACCTCAA...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
3UTR CAA 72 bp AAAGCAACATATGTCTTTTCTGCAGGAATGTCTGAGTaGCACAGTCAAGATCGTTGCTGTTCATTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: KATYVFSAGMSE*HSQDRCCSLFF
Trigger: AAAGAACAATGAACAGCAACGATCTTGACTGTGCAACTCAGACATTCCTGCAGAAAAGACATATGTTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGAGAAAAGTAGTCTTTaGAATATTTACGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREEKSSL*NIYVQE
Trigger: CTCCTGGACGTAAATATTTCAAAGACTACTTTTCTC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGGAGAAAAGTAGTCTTTaGAATATTTACGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVEKSSL*NIYVQE
Trigger: CTCCTGGACGTAAATATTTCAAAGACTACTTTTCTC...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR TCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGAAGCTGCAAAAGGGATaGGAACATTCAAATCCATTT +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVKLQKG*EHSNPF
Trigger: AAATGGATTTGAATGTTCTCATCCCTTTTGCAGCTT...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGCTTTTCATAGGTCATaGTGCTGTTGTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREAFHRS*CCCSSF
Trigger: AAAAGAAGAACAACAGCAGCATGACCTATGAAAAGC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATACAGATTGAGAAACCTTaGACTATAGGGATACAAGAG +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIQIEKP*TIGIQE
Trigger: CTCTTGTATCCCTATAGTCCAAGGTTTCTCAATCTG...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CCA 90 bp AGATGCCAAGAAACCTTCACTCTCAACAAACAACACAATCCACTAATTATCTGTAAGATTGCTCTTGAATaGAAAGGTTGCAGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: RCQETFTLNKQHNPLIICKIALE*KGCRKS
Trigger: GCTCTTTCTGCAACCTTTCCATTCAAGAGCAATCTT...ACAGATAATTAGTGGATTGTGTTGTTTGTTGAGAGTGAAGGTTTCTTGGCATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACCATCAGTAAGTTCTTaGAATCCATTCACTCACTTT +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREPSVSS*NPFTHF
Trigger: AAAGTGAGTGAATGGATTCCAAGAACTTACTGATGG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533754.5
3UTR CAA 72 bp TCTCACAGTAAAATGTTCATAGTAGATAATATGTCCTaGAAGGTTGTGCCGTTGTGCTCTTATTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: SHSKMFIVDNMS*KVVPLCSYSTE
Trigger: TTCAGTGGAATAAGAGCACAACGGCACAACCTTCAAGGACATATTATCTACTATGAACATTTTACTGTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR TCA 90 bp AGATGCCAAGAAACCTTCACTCTCAACAAACAACACAATCCACTAATTATCTGTAATAGAGAGATATGCTaGGAACTTAATACTCAAGCC +
Preference number: 4 (lower is better)
Translates to: RCQETFTLNKQHNPLIICNREIC*ELNTQA
Trigger: GGCTTGAGTATTAAGTTCTCAGCATATCTCTCTATT...ACAGATAATTAGTGGATTGTGTTGTTTGTTGAGAGTGAAGGTTTCTTGGCATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR GCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATTTCATAGGTCATGCTaGTGTTGTTCTTCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREFHRSC*CCSSFY
Trigger: GTAAAAAGAAGAACAACAGCAGCATGACCTATGAAA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGTTTCATAGGTCATGCTaGTGTTGTTCTTCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVFHRSC*CCSSFY
Trigger: GTAAAAAGAAGAACAACAGCAGCATGACCTATGAAA...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGCTTTTCATAGGTCATaGTGCTGTTGTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIAFHRS*CCCSSF
Trigger: AAAAGAAGAACAACAGCAGCATGACCTATGAAAAGC...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACTGTGCTACCATAGTTaGTGTCATATAAATAGTTCT +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIRELCYHS*CHINSS
Trigger: AGAACTATTTATATGACACCAACTATGGTAGCACAG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATTCTTGTTCCCCTCATaGTACATAAATATCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LPVRSSFLFPSWYINIREFLFPS*YINIRE
Trigger: TTCTCTGATATTTATGTACCATGAGGGGAACAAGAA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR GCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATATTTCATAGGTCATGCTaGTGTTGTTCTTCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIFHRSC*CCSSFY
Trigger: GTAAAAAGAAGAACAACAGCAGCATGACCTATGAAA...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATACTGTGCTACCATAGTTaGTGTCATATAAATAGTTCT +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTILCYHS*CHINSS
Trigger: AGAACTATTTATATGACACCAACTATGGTAGCACAG...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CCA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATATTCTTGTTCCCCTCATaGTACATAAATATCAGAGAA +
Preference number: 4 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIFLFPS*YINIRE
Trigger: TTCTCTGATATTTATGTACCATGAGGGGAACAAGAA...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS GCA 90 bp CTTCAGATGCTGCAAGTTGCTGTAGAGGAGCTGCCCCGCCGTCCCTaGCGCCCGGGTGAACTCCTGCAAACTCATGCTGCAGAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: LQMLQVAVEELPRRP*RPGELLQTHAAEVL
Trigger: GAGCACCTCTGCAGCATGAGTTTGCAGGAGTTCACCCGGGCGGCAGGGACGGCGGGGCAGCTCCTCTACAGCAACTTGCAGCATCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000527935.1
ENST00000529527.5
ENST00000530286.5
ENST00000531728.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS GCA 90 bp GTCCCTGCCGCCCGGGTGAACTCCTGCAAACTCATGCTGCAGAGGTaGTCGCCGTTGATGTCGAACTCTTGGAAAGGGATACAATTGGCA +
Preference number: 5 (lower is better)
Translates to: VPAARVNSCKLMLQR*SPLMSNSWKGIQLA
Trigger: TGCCAATTGTATCCCTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCTGCAGCATGAGTTTGCAGGAGTTCACCCGGGCGGCAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000527935.1
ENST00000529161.1
ENST00000529527.5
ENST00000530286.5
ENST00000531728.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS-3UTR CAA 90 bp CCTCCCTTGACGAAGCCATATGGATGCTTATGTGAGGAGGATGCATCACCTTTTCTCGGGTTGTGCTTTTaGGTGTGGCACTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PPLTKPYGCLCEEDASPFLGLCF*VWHLAG
Trigger: CCCTGCCAAGTGCCACACCAAAAAGCACAACCCGAG...AAAAGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS CCA 90 bp GAAGGCTCAGTTTGTTCAGTCTTGACAATGACATTGTGTGTGGACTaGAACAGGTCACTACTGCACTGGCCGTTCCACTTCAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: EGSVCSVLTMTLCVD*NRSLLHWPFHFRCC
Trigger: GCAGCATCTGAAGTGGAACGGCCAGTGCAGTAGTGACCTGTTCCAGTCCACACACAATGTCATTGTCAAGACTGAACAAACTGAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000529527.5
ENST00000530286.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS-3UTR CAA 90 bp CTGGTGGTTCTCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTGATAGGTTGTTGCCGGGGTaGAGATTCATTACACCACCT +
Preference number: 5 (lower is better)
Translates to: LVVLNQGQICHPQGTFGDRLLPG*RFITPP
Trigger: AGGTGGTGTAATGAATCTCAACCCCGGCAACAACCT...ATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGAGAACCACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTTTGGCATCCAGCTGGTaGGTGTCCAGGAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTLASSW*VSRRCW
Trigger: CCAGCACCTCCTGGACACCAACCAGCTGGATGCCAA...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp GACCACTCTTTCTTGTCCCTGACAAAGAATCCTGTCATCTGCAGAATCTCTATTTTGGCATCCAGCTGGTaGGTGTCCAGGAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: DHSFLSLTKNPVICRISILASSW*VSRRCW
Trigger: CCAGCACCTCCTGGACACCAACCAGCTGGATGCCAA...AATAGAGATTCTGCAGATGACAGGATTCTTTGTCAGGGACAAGAAAGAGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR CAA 90 bp CCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTTTGTCCTAACCATCTGCAATGTTCACCTCCCTaGACGAAGCCATATGGATGC +
Preference number: 5 (lower is better)
Translates to: PKAQVKLPGIHPLCPNHLQCSPP*TKPYGC
Trigger: GCATCCATATGGCTTCGTCAAGGGAGGTGAACATTG...CAGATGGTTAGGACAAAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS CCA 90 bp CCAGTAACAAGTTTCCTCAGTGCGGGTATCTGCCACAGGCTGGGCTaGTCATCAAAGGGCCTCAGTCATATTTTAATAGAGCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: PVTSFLSAGICHRLG*SSKGLSHILIELFK
Trigger: CTTGAAGAGCTCTATTAAAATATGACTGAGGCCCTTTGATGACCAGCCCAGCCTGTGGCAGATACCCGCACTGAGGAAACTTGTTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527001.5
CDS-3UTR CAA 90 bp TTCTCTGTCTTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTGTCCCTCAGAGGTGCTCGCCGTaGATGTCGAACTCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: FSVLGHGNLEVRPLFLVPQRCSP*MSNSWK
Trigger: TTTCCAAGAGTTCGACATCAACGGCGAGCACCTCTG...AGGGACAAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAAGACAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR CAA 90 bp AGACCAATGTGTTCAAAGGAAAACTCACAACCTGGGTCTCCCTTCTCAGATGGCCAATGTTCACCTCCCTaGACGAAGCCATATGGATGC +
Preference number: 5 (lower is better)
Translates to: RPMCSKENSQPGSPFSDGQCSPP*TKPYGC
Trigger: GCATCCATATGGCTTCGTCAAGGGAGGTGAACATTG...GCCATCTGAGAAGGGAGACCCAGGTTGTGAGTTTTCCTTTGAACACATTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTAGCCAACCTTGGGTTTaGGAAGTCCCCATTCTCCAC +
Preference number: 5 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQISQPWV*EVPILH
Trigger: GTGGAGAATGGGGACTTCCAAAACCCAAGGTTGGCT...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp ATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACCTGTGCTTCCCAGATaGCATGGCTCAATGGTAAGT +
Preference number: 5 (lower is better)
Translates to: ILHSLDPKAQVKLPGIHPPVLPR*HGSMVS
Trigger: ACTTACCATTGAGCCATGCAATCTGGGAAGCACAGG...TGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATTGGCATCCAGCTGGTaGGTGTCCAGGAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIRELASSW*VSRRCW
Trigger: CCAGCACCTCCTGGACACCAACCAGCTGGATGCCAA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGTTGGCATCCAGCTGGTaGGTGTCCAGGAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVLASSW*VSRRCW
Trigger: CCAGCACCTCCTGGACACCAACCAGCTGGATGCCAA...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCCAGAGGTGCTCGCCGTaGATGTCGAACTCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSQRCSP*MSNSWK
Trigger: TTTCCAAGAGTTCGACATCAACGGCGAGCACCTCTG...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCAAGCCAACCTTGGGTTTaGGAAGTCCCCATTCTCCAC +
Preference number: 5 (lower is better)
Translates to: ETLDYRDTRANSSAISTPSQPWV*EVPILH
Trigger: GTGGAGAATGGGGACTTCCAAAACCCAAGGTTGGCT...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp GAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGCAATCAAGGGCAAATTaGCCACCCCCAGGGAACATT +
Preference number: 5 (lower is better)
Translates to: ESPHHKEHSGQKCQLCRLQSRAN*PPPGNI
Trigger: AATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTG...CAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS TCA 90 bp TTATTAATCCTGGGTTCTTGTCTGGGTTCAAGAGGATGTCGCGGATaGATTCCCATAAGTGAGTCCCTCTCGGGTTGTGCTTTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: LLILGSCLGSRGCRG*IPISESLSGCAFWC
Trigger: ACACCAAAAAGCACAACCCGAGAGGGACTCACTTATGGGAATTCATCCGCGACATCCTCTTGAACCCAGACAAGAACCCAGGATTAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACTCGGGTTGTGCTTTTaGGTGTGGCACTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIRELGLCF*VWHLAG
Trigger: CCCTGCCAAGTGCCACACCAAAAAGCACAACCCGAG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGCTCGGGTTGTGCTTTTaGGTGTGGCACTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVLGLCF*VWHLAG
Trigger: CCCTGCCAAGTGCCACACCAAAAAGCACAACCCGAG...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCCCCATTCTCCACTCATaGGATCCTAAGGCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSPILHS*DPKAQV
Trigger: AACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGG...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCCAATCAAGGGCAAATTaGCCACCCCCAGGGAACATT +
Preference number: 5 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSQSRAN*PPPGNI
Trigger: AATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTG...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp CTGGTGGTTCTCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTGATGTTGAAGTCTTGCTTTaGCTTCACTCTAAGGAGCTA +
Preference number: 5 (lower is better)
Translates to: LVVLNQGQICHPQGTFGDVEVLL*LHSKEL
Trigger: TAGCTCCTTAGAGTGAAGCAAAAGCAAGACTTCAAC...ATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGAGAACCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp CCTCCCTTGACGAAGCCATATGGATGCTTATGTGAGGAGGATGCATCACCTTTTGTAGATAATATGTCCTaGAAGGTTGTGCCGTTGTGC +
Preference number: 5 (lower is better)
Translates to: PPLTKPYGCLCEEDASPFVDNMS*KVVPLC
Trigger: GCACAACGGCACAACCTTCAAGGACATATTATCTAC...AAAAGGTGATGCATCCTCCTCACATAAGCATCCATATGGCTTCGTCAAGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCAACCCAACGGCCTGTTTaGGTTTCATTTCAGCGCAAG +
Preference number: 5 (lower is better)
Translates to: ETLDYRDTRANSSAISTPTQRPV*VSFQRK
Trigger: CTTGCGCTGAAATGAAACCAAAACAGGCCGTTGGGT...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp ATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTCATCCAACATATATaGACTTGTGGAACCCAACGG +
Preference number: 5 (lower is better)
Translates to: ILHSLDPKAQVKLPGIHPLIQHI*TCGTQR
Trigger: CCGTTGGGTTCCACAAGTCAATATATGTTGGATGAG...TGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp TTCCATTTCTCTGTCTTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTAGGTTGTTGCCGGGGTaGAGATTCATTACACCACCT +
Preference number: 5 (lower is better)
Translates to: FHFSVLGHGNLEVRPLFLRLLPG*RFITPP
Trigger: AGGTGGTGTAATGAATCTCAACCCCGGCAACAACCT...AAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAAGACAGAGAAATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR CAA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTTGGAAAGGGATACAATaGGCATCCAGCTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTWKGIQ*ASSWLV
Trigger: CACCAACCAGCTGGATGCCAATTGTATCCCTTTCCA...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp TTCCATTTCTCTGTCTTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTTGGAAAGGGATACAATaGGCATCCAGCTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: FHFSVLGHGNLEVRPLFLWKGIQ*ASSWLV
Trigger: CACCAACCAGCTGGATGCCAATTGTATCCCTTTCCA...AAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAAGACAGAGAAATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR CAA 90 bp GTTACCACCCCAAGTTGGCATAGCTCGATTACTTTAAGTTCTCCAAGTCACGAAGTCTTGACAATGACATaGTGTGTGGACTGGAACAGG +
Preference number: 5 (lower is better)
Translates to: VTTPSWHSSITLSSPSHEVLTMT*CVDWNR
Trigger: CCTGTTCCAGTCCACACACAATGTCATTGTCAAGAC...TTCGTGACTTGGAGAACTTAAAGTAATCGAGCTATGCCAACTTGGGGTGGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp GAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGGATGGAAGGCTCAGTTaGTTCAGTCTTGACAATGAC +
Preference number: 5 (lower is better)
Translates to: ESPHHKEHSGQKCQLCRLDGRLS*FSLDND
Trigger: GTCATTGTCAAGACTGAACAAACTGAGCCTTCCATC...CAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp GGTTGCAGAAAGAGCCAAAGCCAATTTGGAAGAAGTGAGAAACTTACAGGTTTGCCCATTCTCCACTCATaGGATCCTAAGGCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: GCRKSQSQFGRSEKLTGLPILHS*DPKAQV
Trigger: AACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGG...CAAACCTGTAAGTTTCTCACTTCTTCCAAATTGGCTTTGGCTCTTTCTGCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp GTTACCACCCCAAGTTGGCATAGCTCGATTACTTTAAGTTCTCCAAGTCACGAAACCCCCAGGGAACATTaGGTGATGTCTAGAGACATT +
Preference number: 5 (lower is better)
Translates to: VTTPSWHSSITLSSPSHETPREH*VMSRDI
Trigger: AATGTCTCTAGACATCACCAAATGTTCCCTGGGGGT...TTCGTGACTTGGAGAACTTAAAGTAATCGAGCTATGCCAACTTGGGGTGGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCACCCCCAGGGAACATTaGGTGATGTCTAGAGACATT +
Preference number: 5 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSTPREH*VMSRDI
Trigger: AATGTCTCTAGACATCACCAAATGTTCCCTGGGGGT...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp TGGGTTTTGGAAGTCCCCATTCTCCACTCATTGGATCCTAAGGCTCAGGTTAAAGAAGCTTTTAACTCCTaGGTGACAATTGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: WVLEVPILHSLDPKAQVKEAFNS*VTIVPE
Trigger: CTCAGGCACAATTGTCACCAAGGAGTTAAAAGCTTC...TTTAACCTGAGCCTTAGGATCCAATGAGTGGAGAATGGGGACTTCCAAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp CCTAAGGCTCAGGTTAAACTTCCCGGCATCCATCCACTTTGTCCTAACCATCTGGCACAGTCAAGATCGTaGCTGTTCATTGTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: PKAQVKLPGIHPLCPNHLAQSRS*LFIVLF
Trigger: AAAAAGAACAATGAACAGCAACGATCTTGACTGTGC...CAGATGGTTAGGACAAAGTGGATGGATGCCGGGAAGTTTAACCTGAGCCTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp GGTTGCAGAAAGAGCCAAAGCCAATTTGGAAGAAGTGAGAAACTTACAGGTTTGGCAGGAATGTCTGAGTaGCACAGTCAAGATCGTTGC +
Preference number: 5 (lower is better)
Translates to: GCRKSQSQFGRSEKLTGLAGMSE*HSQDRC
Trigger: GCAACGATCTTGACTGTGCAACTCAGACATTCCTGC...CAAACCTGTAAGTTTCTCACTTCTTCCAAATTGGCTTTGGCTCTTTCTGCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTAGTTGTTTCCACAAATaGTCAACCCAGGAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQISCFHK*STQEPD
Trigger: ATCTGGCTCCTGGGTTGACAATTTGTGGAAACAACT...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGGGCAACCCCATGCCCTaGCCTTCACAGAAAACTCTG +
Preference number: 5 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVGNPMP*PSQKTL
Trigger: CAGAGTTTTCTGTGAAGGCAAGGGCATGGGGTTGCC...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531794.5
CDS TCA 90 bp ACCTCCTTCCAGAATCATGATCTCCATGGCTGCAGAACCAACTCCTaGATTAGACTTCCATCAGTAAGTTCTTGGAATCCATTCACTCAC +
Preference number: 5 (lower is better)
Translates to: TSFQNHDLHGCRTNS*IRLPSVSSWNPFTH
Trigger: GTGAGTGAATGGATTCCAAGAACTTACTGATGGAAGTCTAATTCAGGAGTTGGTTCTGCAGCCATGGAGATCATGATTCTGGAAGGAGGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533754.5
CDS-3UTR CAA 90 bp TCACACAACTCAGACACACACACAGACACACAAATATTCATGCGTTATACCCATTGGAAAGGGATACAATaGGCATCCAGCTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: SHNSDTHTDTQIFMRYTHWKGIQ*ASSWLV
Trigger: CACCAACCAGCTGGATGCCAATTGTATCCCTTTCCA...ATGGGTATAACGCATGAATATTTGTGTGTCTGTGTGTGTGTCTGAGTTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp TTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTGTCCCTGACAAAGAAGTTGATGTCGAACTCTaGGAAAGGGATACAATTGGC +
Preference number: 5 (lower is better)
Translates to: LGHGNLEVRPLFLVPDKEVDVEL*ERDTIG
Trigger: GCCAATTGTATCCCTTTCCAAGAGTTCGACATCAAC...TTCTTTGTCAGGGACAAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR CAA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGCAGAGGTGCTCGCCGTaGATGTCGAACTCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVQRCSP*MSNSWK
Trigger: TTTCCAAGAGTTCGACATCAACGGCGAGCACCTCTG...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACAGAGGTGCTCGCCGTaGATGTCGAACTCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIREQRCSP*MSNSWK
Trigger: TTTCCAAGAGTTCGACATCAACGGCGAGCACCTCTG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCAGATGGAAGGCTCAGTTaGTTCAGTCTTGACAATGAC +
Preference number: 5 (lower is better)
Translates to: ETLDYRDTRANSSAISTPDGRLS*FSLDND
Trigger: GTCATTGTCAAGACTGAACAAACTGAGCCTTCCATC...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp AGAAGTGAGCAGACAGGGCAATTAAAGTATTTCACCAACCATCCAAAGGGGAGAATTAATCCTGGGTTCTaGTCTGGGTTCAAGAGGATG +
Preference number: 5 (lower is better)
Translates to: RSEQTGQLKYFTNHPKGRINPGF*SGFKRM
Trigger: CATCCTCTTGAACCCAGACAAGAACCCAGGATTAAT...TCTCCCCTTTGGATGGTTGGTGAAATACTTTAATTGCCCTGTCTGCTCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp CTGGTGGTTCTCAATCAAGGGCAAATTTGCCACCCCCAGGGAACATTTGGTGATAACACTTTGCAACCTTaGAATATGAATTGCTCACCT +
Preference number: 5 (lower is better)
Translates to: LVVLNQGQICHPQGTFGDNTLQP*NMNCSP
Trigger: AGGTGAGCAATTCATATTCAAAGGTTGCAAAGTGTT...ATCACCAAATGTTCCCTGGGGGTGGCAAATTTGCCCTTGATTGAGAACCACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCAGTCTTAGCAATAGATTaGCTGCCTCATGTTCCCATG +
Preference number: 5 (lower is better)
Translates to: ETLDYRDTRANSSAISTPVLAID*LPHVPM
Trigger: CATGGGAACATGAGGCAGCAAATCTATTGCTAAGAC...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp TCACACAACTCAGACACACACACAGACACACAAATATTCATGCGTTATACCCATACATTCAAGAAACTGTaGCTTATGCCCCTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: SHNSDTHTDTQIFMRYTHTFKKL*LMPLGA
Trigger: GGCTCCCAGGGGCATAAGCAACAGTTTCTTGAATGT...ATGGGTATAACGCATGAATATTTGTGTGTCTGTGTGTGTGTCTGAGTTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp AGAAGTGAGCAGACAGGGCAATTAAAGTATTTCACCAACCATCCAAAGGGGAGATTGAAGGTTGTGCCGTaGTGCTCTTATTCCACTGAA +
Preference number: 5 (lower is better)
Translates to: RSEQTGQLKYFTNHPKGRLKVVP*CSYSTE
Trigger: TTCAGTGGAATAAGAGCACAACGGCACAACCTTCAA...TCTCCCCTTTGGATGGTTGGTGAAATACTTTAATTGCCCTGTCTGCTCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACCAGATCAGTCCACATaGGGGCTAACACTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIREPDQST*GLTLLH
Trigger: GTGGAGAAGTGTTAGCCCCAATGTGGACTGATCTGG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530286.5
CDS-3UTR CAA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGAGGTTGTTGCCGGGGTaGAGATTCATTACACCACCT +
Preference number: 5 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVRLLPG*RFITPP
Trigger: AGGTGGTGTAATGAATCTCAACCCCGGCAACAACCT...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAAGGTTGTTGCCGGGGTaGAGATTCATTACACCACCT +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIRERLLPG*RFITPP
Trigger: AGGTGGTGTAATGAATCTCAACCCCGGCAACAACCT...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATGGAAAGGGATACAATaGGCATCCAGCTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIREWKGIQ*ASSWLV
Trigger: CACCAACCAGCTGGATGCCAATTGTATCCCTTTCCA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGTGGAAAGGGATACAATaGGCATCCAGCTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVWKGIQ*ASSWLV
Trigger: CACCAACCAGCTGGATGCCAATTGTATCCCTTTCCA...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp GGTTGCAGAAAGAGCCAAAGCCAATTTGGAAGAAGTGAGAAACTTACAGGTTTGGTTGATGTCGAACTCTaGGAAAGGGATACAATTGGC +
Preference number: 5 (lower is better)
Translates to: GCRKSQSQFGRSEKLTGLVDVEL*ERDTIG
Trigger: GCCAATTGTATCCCTTTCCAAGAGTTCGACATCAAC...CAAACCTGTAAGTTTCTCACTTCTTCCAAATTGGCTTTGGCTCTTTCTGCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTGTTGATGTCGAACTCTaGGAAAGGGATACAATTGGC +
Preference number: 5 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTVDVEL*ERDTIG
Trigger: GCCAATTGTATCCCTTTCCAAGAGTTCGACATCAAC...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTTCAGTTTGTTCAGTCTaGACAATGACATTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQISVCSV*TMTLCV
Trigger: CACACACAATGTCATTGTCAAGACTGAACAAACTGA...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp GGAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGGCCAAAAATGTCAATaGTGCAGATTGAGAAACCTT +
Preference number: 5 (lower is better)
Translates to: GKPSPQRTLRPKMSIVQIGQKCQ*CRLRNL
Trigger: AAGGTTTCTCAATCTGCACAATTGACATTTTTGGCC...AATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCAGTTGAGGTTGAAGTCTaGCTTTTGCTTCACTCTAAG +
Preference number: 5 (lower is better)
Translates to: ETLDYRDTRANSSAISTPVEVEV*LLLHSK
Trigger: CTTAGAGTGAAGCAAAAGCAAGACTTCAACCTCAAC...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp GAAACCTTGGACTATAGGGATACAAGAGCAAACTCTTCAGCCATTTCCACACCATTACTTTATCTGACATaGGCTCTCATCTGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: ETLDYRDTRANSSAISTPLLYLT*ALIWGS
Trigger: AGAACCCCAGATGAGAGCCAATGTCAGATAAAGTAA...TGGTGTGGAAATGGCTGAAGAGTTTGCTCTTGTATCCCTATAGTCCAAGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp GAAAGCCCTCACCACAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAGCCAAAGCCAATTaGGAAGAAGTGAGAAACTTA +
Preference number: 5 (lower is better)
Translates to: ESPHHKEHSGQKCQLCRLRAKAN*EEVRNL
Trigger: TAAGTTTCTCACTTCTTCCAAATTGGCTTTGGCTCT...CAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTGTGGTGAGGGCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp CCATGTGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGACTTTGCTCTCCCTTTAGCAAGGCAGGAACTTaGAGAAAAGACCAATGTGTT +
Preference number: 5 (lower is better)
Translates to: PCVPKRKEGLSIRLCSPFSKAGT*RKDQCV
Trigger: AACACATTGGTCTTTTCTCAAAGTTCCTGCCTTGCT...AAAGGGAGAGCAAAGTCTTATGGATAAACCCTCCTTTCTTTTGGGGACACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAAGGTTGTTGCCGGGGTaGAGATTCATTACACCACCT +
Preference number: 5 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIRLLPG*RFITPP
Trigger: AGGTGGTGTAATGAATCTCAACCCCGGCAACAACCT...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATATGGAAAGGGATACAATaGGCATCCAGCTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIWKGIQ*ASSWLV
Trigger: CACCAACCAGCTGGATGCCAATTGTATCCCTTTCCA...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGTCTTGACAATGACATaGTGTGTGGACTGGAACAGG +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIREVLTMT*CVDWNR
Trigger: CCTGTTCCAGTCCACACACAATGTCATTGTCAAGAC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGCCCGGCAGAAAGTTTaGCTGTCCAACAAATCTACT +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIREARQKV*LSNKST
Trigger: AGTAGATTTGTTGGACAGCAAAACTTTCTGCCGGGC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGGCCCGGCAGAAAGTTTaGCTGTCCAACAAATCTACT +
Preference number: 5 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVARQKV*LSNKST
Trigger: AGTAGATTTGTTGGACAGCAAAACTTTCTGCCGGGC...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257831.8
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp GCCATTTCCACACCACCGTCTCCTTTTTCCAACTTATTTTTAAGCACTTGGAGCGTTAGAAGTAGTTTCTaGTTCCCCTCATGGTACATA +
Preference number: 5 (lower is better)
Translates to: AISTPPSPFSNLFLSTWSVRSSF*FPSWYI
Trigger: TATGTACCATGAGGGGAACAAGAAACTACTTCTAAC...GCTCCAAGTGCTTAAAAATAAGTTGGAAAAAGGAGACGGTGGTGTGGAAATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp AGAAGTGAGCAGACAGGGCAATTAAAGTATTTCACCAACCATCCAAAGGGGAGAGGCCAAAAATGTCAATaGTGCAGATTGAGAAACCTT +
Preference number: 5 (lower is better)
Translates to: RSEQTGQLKYFTNHPKGRGQKCQ*CRLRNL
Trigger: AAGGTTTCTCAATCTGCACAATTGACATTTTTGGCC...TCTCCCCTTTGGATGGTTGGTGAAATACTTTAATTGCCCTGTCTGCTCACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTTTACTTTATCTGACATaGGCTCTCATCTGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTLLYLT*ALIWGS
Trigger: AGAACCCCAGATGAGAGCCAATGTCAGATAAAGTAA...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp AGAAGTGAGCAGACAGGGCAATTAAAGTATTTCACCAACCATCCAAAGGGGAGATTTATCCATAAGACTTaGCTCTCCCTTTCAACACTG +
Preference number: 5 (lower is better)
Translates to: RSEQTGQLKYFTNHPKGRFIHKT*LSLSTL
Trigger: CAGTGTTGAAAGGGAGAGCAAAGTCTTATGGATAAA...TCTCCCCTTTGGATGGTTGGTGAAATACTTTAATTGCCCTGTCTGCTCACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAACCAACATATATTGACTaGTGGAACCCAACGGCCTGT +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIREPTYID*WNPTAC
Trigger: ACAGGCCGTTGGGTTCCACAAGTCAATATATGTTGG...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp TTCCATTTCTCTGTCTTGGGACATGGTAATTTGGAGGTGAGACCACTCTTTCTTTTCCATTTCTCTGTCTaGGGACATGGTAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: FHFSVLGHGNLEVRPLFLFHFSV*GHGNLE
Trigger: CTCCAAATTACCATGTCCCAAGACAGAGAAATGGAA...AAGAAAGAGTGGTCTCACCTCCAAATTACCATGTCCCAAGACAGAGAAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527935.1
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGTTGATGTCGAACTCTaGGAAAGGGATACAATTGGC +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIREVDVEL*ERDTIG
Trigger: GCCAATTGTATCCCTTTCCAAGAGTTCGACATCAAC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGATGGAAGGCTCAGTTaGTTCAGTCTTGACAATGAC +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIREDGRLS*FSLDND
Trigger: GTCATTGTCAAGACTGAACAAACTGAGCCTTCCATC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGCCCGGCAGAAAGTTTaGCTGTCCAACAAATCTACT +
Preference number: 5 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIARQKV*LSNKST
Trigger: AGTAGATTTGTTGGACAGCAAAACTTTCTGCCGGGC...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257831.8
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CAGATAAGTCTCACAGTTCCCAATAAGGCAACAGAATCCTCATCCAACATATATATTAATCCTGGGTTCTaGTCTGGGTTCAAGAGGATG +
Preference number: 5 (lower is better)
Translates to: QISLTVPNKATESSSNIYINPGF*SGFKRM
Trigger: CATCCTCTTGAACCCAGACAAGAACCCAGGATTAAT...ATATATGTTGGATGAGGATTCTGTTGCCTTATTGGGAACTGTGAGACTTATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAATTAATCCTGGGTTCTaGTCTGGGTTCAAGAGGATG +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIREINPGF*SGFKRM
Trigger: CATCCTCTTGAACCCAGACAAGAACCCAGGATTAAT...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGATTAATCCTGGGTTCTaGTCTGGGTTCAAGAGGATG +
Preference number: 5 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVINPGF*SGFKRM
Trigger: CATCCTCTTGAACCCAGACAAGAACCCAGGATTAAT...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CCATGTGTCCCCAAAAGAAAGGAGGGTTTATCCATAAGACTTTGCTCTCCCTTTTTTGTGTCCAAAGTATaGGCAGCTTCAGTTTTCATT +
Preference number: 5 (lower is better)
Translates to: PCVPKRKEGLSIRLCSPFFVSKV*AASVFI
Trigger: AATGAAAACTGAAGCTGCCAATACTTTGGACACAAA...AAAGGGAGAGCAAAGTCTTATGGATAAACCCTCCTTTCTTTTGGGGACACATGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGTTGATGTCGAACTCTaGGAAAGGGATACAATTGGC +
Preference number: 5 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIVDVEL*ERDTIG
Trigger: GCCAATTGTATCCCTTTCCAAGAGTTCGACATCAAC...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CAAAGAACACTCCGGCCAAAAATGTCAATTGTGCAGATTGAGAAACCTTGGACTTTTGTGTCCAAAGTATaGGCAGCTTCAGTTTTCATT +
Preference number: 5 (lower is better)
Translates to: QRTLRPKMSIVQIEKPWTFVSKV*AASVFI
Trigger: AATGAAAACTGAAGCTGCCAATACTTTGGACACAAA...AGTCCAAGGTTTCTCAATCTGCACAATTGACATTTTTGGCCGGAGTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGTTGAAGTCTTGCTTTaGCTTCACTCTAAGGAGCTA +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIREVEVLL*LHSKEL
Trigger: TAGCTCCTTAGAGTGAAGCAAAAGCAAGACTTCAAC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257831.8
ENST00000450654.6
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATCAGTTTGTTCAGTCTaGACAATGACATTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIRESVCSV*TMTLCV
Trigger: CACACACAATGTCATTGTCAAGACTGAACAAACTGA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGTCAGTTTGTTCAGTCTaGACAATGACATTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVSVCSV*TMTLCV
Trigger: CACACACAATGTCATTGTCAAGACTGAACAAACTGA...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAAGTTAGAAGTAGTTTCTaGTTCCCCTCATGGTACATA +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIREVRSSF*FPSWYI
Trigger: TATGTACCATGAGGGGAACAAGAAACTACTTCTAAC...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp AGATGCCAAGAAACCTTCACTCTCAACAAACAACACAATCCACTAATTATCTGTGTTGAGGTTGAAGTCTaGCTTTTGCTTCACTCTAAG +
Preference number: 5 (lower is better)
Translates to: RCQETFTLNKQHNPLIICVEVEV*LLLHSK
Trigger: CTTAGAGTGAAGCAAAAGCAAGACTTCAACCTCAAC...ACAGATAATTAGTGGATTGTGTTGTTTGTTGAGAGTGAAGGTTTCTTGGCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATTTGTGTCCAAAGTATaGGCAGCTTCAGTTTTCATT +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIREFVSKV*AASVFI
Trigger: AATGAAAACTGAAGCTGCCAATACTTTGGACACAAA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp CAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGTTTGTGTCCAAAGTATaGGCAGCTTCAGTTTTCATT +
Preference number: 5 (lower is better)
Translates to: QGYKSCYSCSEKEFTIEVFVSKV*AASVFI
Trigger: AATGAAAACTGAAGCTGCCAATACTTTGGACACAAA...CACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS-3UTR CAA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGATCGTTGCTGTTCATaGTTCTTTTTCTCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIDRCCS*FFFSAL
Trigger: AAGAGCTGAGAAAAAGAACAATGAACAGCAACGATC...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257831.8
CDS-3UTR CAA 90 bp CTTCCCGTTAGAAGTAGTTTCTTGTTCCCCTCATGGTACATAAATATCAGAGAATCCAGAATCATGATCTaGAAAAGAATTTCAGCTAGG +
Preference number: 5 (lower is better)
Translates to: LPVRSSFLFPSWYINIRESRIMI*KRISAR
Trigger: CCTAGCTGAAATTCTTTTCAAGATCATGATTCTGGA...TTCTCTGATATTTATGTACCATGAGGGGAACAAGAAACTACTTCTAACGGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531794.5
CDS-3UTR CAA 90 bp GAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATATTTGTGTCCAAAGTATaGGCAGCTTCAGTTTTCATT +
Preference number: 5 (lower is better)
Translates to: EAQGYKSCYSCSEKEFTIFVSKV*AASVFI
Trigger: AATGAAAACTGAAGCTGCCAATACTTTGGACACAAA...TATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000531794.5
ENST00000533754.5
CDS TCA 72 bp TGTAGAGGAGCTGCCCCGCCGTCCCTGCCGCCCGGGTaGACTCCTGCAAACTCATGCTGCAGAGGTGCTCGC +
Preference number: 6 (lower is better)
Translates to: CRGAAPPSLPPG*TPANSCCRGAR
Trigger: GCGAGCACCTCTGCAGCATGAGTTTGCAGGAGTTCACCCGGGCGGCAGGGACGGCGGGGCAGCTCCTCTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000527935.1
ENST00000529161.1
ENST00000529527.5
ENST00000530286.5
ENST00000531728.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS GCA 72 bp AGCTGCCCCGCCGTCCCTGCCGCCCGGGTGAACTCCTaGAAACTCATGCTGCAGAGGTGCTCGCCGTTGATG +
Preference number: 6 (lower is better)
Translates to: SCPAVPAARVNS*KLMLQRCSPLM
Trigger: CATCAACGGCGAGCACCTCTGCAGCATGAGTTTGCAGGAGTTCACCCGGGCGGCAGGGACGGCGGGGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000527935.1
ENST00000529161.1
ENST00000529527.5
ENST00000530286.5
ENST00000531728.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS GCA 72 bp CTGCAAGTTGCTGTAGAGGAGCTGCCCCGCCGTCCCTaGCGCCCGGGTGAACTCCTGCAAACTCATGCTGCA +
Preference number: 6 (lower is better)
Translates to: LQVAVEELPRRP*RPGELLQTHAA
Trigger: TGCAGCATGAGTTTGCAGGAGTTCACCCGGGCGGCAGGGACGGCGGGGCAGCTCCTCTACAGCAACTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000527935.1
ENST00000529161.1
ENST00000529527.5
ENST00000530286.5
ENST00000531728.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS GCA 72 bp TACTGCACTGGCCGTTCCACTTCAGATGCTGCAAGTTaGTGTAGAGGAGCTGCCCCGCCGTCCCTGCCGCCC +
Preference number: 6 (lower is better)
Translates to: YCTGRSTSDAAS*CRGAAPPSLPP
Trigger: GGGCGGCAGGGACGGCGGGGCAGCTCCTCTACAGCAACTTGCAGCATCTGAAGTGGAACGGCCAGTGCAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000529527.5
ENST00000530286.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS GCA 72 bp AGAGAGAGTCACCGTTCCACTTCAGATGCTGCAAGTTaGTGTAGAGGAGCTGCCCCGCCGTCCCTGCCGCCC +
Preference number: 6 (lower is better)
Translates to: RESHRSTSDAAS*CRGAAPPSLPP
Trigger: GGGCGGCAGGGACGGCGGGGCAGCTCCTCTACAGCAACTTGCAGCATCTGAAGTGGAACGGTGACTCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527935.1
ENST00000531728.5
CDS CAA 90 bp CAGAGGTGCTCGCCGTTGATGTCGAACTCTTGGAAAGGGATACAATaGGCATCCAGCTGGTTGGTGTCCAGGAGGTGCTGGAGCCACTCC +
Preference number: 6 (lower is better)
Translates to: QRCSPLMSNSWKGIQ*ASSWLVSRRCWSHS
Trigger: GGAGTGGCTCCAGCACCTCCTGGACACCAACCAGCTGGATGCCAATTGTATCCCTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000527935.1
ENST00000529161.1
ENST00000529527.5
ENST00000530286.5
ENST00000531728.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS CAA 90 bp GCCCGGGTGAACTCCTGCAAACTCATGCTGCAGAGGTGCTCGCCGTaGATGTCGAACTCTTGGAAAGGGATACAATTGGCATCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: ARVNSCKLMLQRCSP*MSNSWKGIQLASSW
Trigger: CCAGCTGGATGCCAATTGTATCCCTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCTGCAGCATGAGTTTGCAGGAGTTCACCCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000527935.1
ENST00000529161.1
ENST00000529527.5
ENST00000530286.5
ENST00000531728.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS GCA 72 bp GCCCGGGTGAACTCCTGCAAACTCATGCTGCAGAGGTaGTCGCCGTTGATGTCGAACTCTTGGAAAGGGATA +
Preference number: 6 (lower is better)
Translates to: ARVNSCKLMLQR*SPLMSNSWKGI
Trigger: TATCCCTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCTGCAGCATGAGTTTGCAGGAGTTCACCCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000527935.1
ENST00000529161.1
ENST00000529527.5
ENST00000530286.5
ENST00000531728.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS CAA 72 bp AGGACCAATCCTCTTCTCTCCGGCAACCCCATGCCCTaGCCTTCACAGAAAACTCTGACTAGGACGTGGAGT +
Preference number: 6 (lower is better)
Translates to: RTNPLLSGNPMP*PSQKTLTRTWS
Trigger: ACTCCACGTCCTAGTCAGAGTTTTCTGTGAAGGCAAGGGCATGGGGTTGCCGGAGAGAAGAGGATTGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531794.5
CDS CAA 90 bp CTGCAAACTCATGCTGCAGAGGTGCTCGCCGTTGATGTCGAACTCTaGGAAAGGGATACAATTGGCATCCAGCTGGTTGGTGTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: LQTHAAEVLAVDVEL*ERDTIGIQLVGVQE
Trigger: CTCCTGGACACCAACCAGCTGGATGCCAATTGTATCCCTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCTGCAGCATGAGTTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000527935.1
ENST00000529161.1
ENST00000529527.5
ENST00000530286.5
ENST00000531728.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS TCA 72 bp GGGTTCAAGAGGATGTCGCGGATGAATTCCCATAAGTaGGTCCCTCTCGGGTTGTGCTTTTTGGTGTGGCAC +
Preference number: 6 (lower is better)
Translates to: GFKRMSRMNSHK*VPLGLCFLVWH
Trigger: GTGCCACACCAAAAAGCACAACCCGAGAGGGACTCACTTATGGGAATTCATCCGCGACATCCTCTTGAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS TCA 72 bp CTGGGTTCTTGTCTGGGTTCAAGAGGATGTCGCGGATaGATTCCCATAAGTGAGTCCCTCTCGGGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: LGSCLGSRGCRG*IPISESLSGCA
Trigger: AGCACAACCCGAGAGGGACTCACTTATGGGAATTCATCCGCGACATCCTCTTGAACCCAGACAAGAACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS CAA 72 bp CATGCTGCAGAGGTGCTCGCCGTTGATGTCGAACTCTaGGAAAGGGATACAATTGGCATCCAGCTGGTTGGT +
Preference number: 6 (lower is better)
Translates to: HAAEVLAVDVEL*ERDTIGIQLVG
Trigger: ACCAACCAGCTGGATGCCAATTGTATCCCTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCTGCAGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000527935.1
ENST00000529161.1
ENST00000529527.5
ENST00000530286.5
ENST00000531728.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS GCA 72 bp ATCATGATCTGCACACCCAGTAACAAGTTTCCTCAGTaGGGGTATCTGCCACAGGCTGGGCTGGTCATCAAA +
Preference number: 6 (lower is better)
Translates to: IMICTPSNKFPQ*GYLPQAGLVIK
Trigger: TTTGATGACCAGCCCAGCCTGTGGCAGATACCCGCACTGAGGAAACTTGTTACTGGGTGTGCAGATCATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527001.5
CDS TCA 72 bp ACTCCTGCAAACTCATGCTGCAGAGGTGCTCGCCGTTaGTGTCGAACTCTTGGAAAGGGATACAATTGGCAT +
Preference number: 6 (lower is better)
Translates to: TPANSCCRGARR*CRTLGKGYNWH
Trigger: ATGCCAATTGTATCCCTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCTGCAGCATGAGTTTGCAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000527935.1
ENST00000529161.1
ENST00000529527.5
ENST00000530286.5
ENST00000531728.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS CCA 72 bp TCATATCAGGTGACTCTGCAACAGGAAGGTGACTGGTaGTTGTCATGGAGATCTGAGCCCGGCAGAAAGTTT +
Preference number: 6 (lower is better)
Translates to: SYQVTLQQEGDW*LSWRSEPGRKF
Trigger: AAACTTTCTGCCGGGCTCAGATCTCCATGACAACCACCAGTCACCTTCCTGTTGCAGAGTCACCTGATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS CCA 72 bp AGTTTCCTCAGTGCGGGTATCTGCCACAGGCTGGGCTaGTCATCAAAGGGCCTCAGTCATATTTTAATAGAG +
Preference number: 6 (lower is better)
Translates to: SFLSAGICHRLG*SSKGLSHILIE
Trigger: CTCTATTAAAATATGACTGAGGCCCTTTGATGACCAGCCCAGCCTGTGGCAGATACCCGCACTGAGGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527001.5
CDS CAA 72 bp AACTCCTGCAAACTCATGCTGCAGAGGTGCTCGCCGTaGATGTCGAACTCTTGGAAAGGGATACAATTGGCA +
Preference number: 6 (lower is better)
Translates to: NSCKLMLQRCSP*MSNSWKGIQLA
Trigger: TGCCAATTGTATCCCTTTCCAAGAGTTCGACATCAACGGCGAGCACCTCTGCAGCATGAGTTTGCAGGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000527935.1
ENST00000529161.1
ENST00000529527.5
ENST00000530286.5
ENST00000531728.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS CCA 72 bp GTTTGTTCAGTCTTGACAATGACATTGTGTGTGGACTaGAACAGGTCACTACTGCACTGGCCGTTCCACTTC +
Preference number: 6 (lower is better)
Translates to: VCSVLTMTLCVD*NRSLLHWPFHF
Trigger: GAAGTGGAACGGCCAGTGCAGTAGTGACCTGTTCCAGTCCACACACAATGTCATTGTCAAGACTGAACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000525253.5
ENST00000529527.5
ENST00000530286.5
ENST00000531794.5
ENST00000532302.1
ENST00000533754.5
CDS GCA 72 bp TGGTTGTCATGGAGATCTGAGCCCGGCAGAAAGTTTTaGTGTCCAACAAATCTACTGTGCTACCATAGTTGG +
Preference number: 6 (lower is better)
Translates to: WLSWRSEPGRKF*CPTNLLCYHSW
Trigger: CCAACTATGGTAGCACAGTAGATTTGTTGGACAGCAAAACTTTCTGCCGGGCTCAGATCTCCATGACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257831.8
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS CAA 72 bp TCAGATCGGTCTTCCCATTTTATTAATCCTGGGTTCTaGTCTGGGTTCAAGAGGATGTCGCGGATGAATTCC +
Preference number: 6 (lower is better)
Translates to: SDRSSHFINPGF*SGFKRMSRMNS
Trigger: GGAATTCATCCGCGACATCCTCTTGAACCCAGACAAGAACCCAGGATTAATAAAATGGGAAGACCGATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000450654.6
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5
CDS CAA 72 bp GAAGTTAATTTCCCACTGTTCCCAGATCAGTCCACATaGGGGCTAACACTTCTCCACAATGTCCAAGCAAAA +
Preference number: 6 (lower is better)
Translates to: EVNFPLFPDQST*GLTLLHNVQAK
Trigger: TTTTGCTTGGACATTGTGGAGAAGTGTTAGCCCCAATGTGGACTGATCTGGGAACAGTGGGAAATTAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530286.5
CDS CCA 72 bp TCATATCAGGTGACTCTGCTACTGTGCTACCATAGTTaGTGTCATATAAATAGTTCTCGTCTTTCCAGGTGT +
Preference number: 6 (lower is better)
Translates to: SYQVTLLLCYHS*CHINSSRLSRC
Trigger: ACACCTGGAAAGACGAGAACTATTTATATGACACCAACTATGGTAGCACAGTAGCAGAGTCACCTGATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450654.6
ENST00000529527.5
CDS CCA 72 bp TTTTGCTGTCCAACAAATCTACTGTGCTACCATAGTTaGTGTCATATAAATAGTTCTCGTCTTTCCAGGTGT +
Preference number: 6 (lower is better)
Translates to: FCCPTNLLCYHS*CHINSSRLSRC
Trigger: ACACCTGGAAAGACGAGAACTATTTATATGACACCAACTATGGTAGCACAGTAGATTTGTTGGACAGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257831.8
ENST00000525253.5
ENST00000530286.5
ENST00000531794.5
ENST00000533754.5