RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EHD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000110047

Ensembl transcript IDs: ENST00000320631.8, ENST00000359393.6, ENST00000421510.5, ENST00000466015.1, ENST00000484846.1, ENST00000488711.1, ENST00000489379.1, ENST00000498472.1, ENST00000621096.4

Found 525 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTaGAGGCTGGGCTCAATGGCCCCAGGCAGAGGAGGGGGAGGCGGC +
Preference number: 1 (lower is better)
Translates to: HSPDSGHWPANAPGP*RLGSMAPGRGGGGG
Trigger: GCCGCCTCCCCCTCCTCTGCCTGGGGCCATTGAGCCCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 90 bp AGACCAAGGTGGCTGGGCCCTGCTTCTGTGACTGCTGAGCGGGGTTaGGCGTCGGAGCCGGTGGGGCGCGGGAGGAAAGGGCAGGGCCCG +
Preference number: 1 (lower is better)
Translates to: RPRWLGPASVTAERG*ASEPVGRGRKGQGP
Trigger: CGGGCCCTGCCCTTTCCTCCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGGGCCCAGCCACCTTGGTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 90 bp CCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTaGAAACGCGCCCGGGCCCTGGAGGCTGGGCTCAATGGCCCCAGG +
Preference number: 1 (lower is better)
Translates to: PPALVPSQPGQWPLA*KRARALEAGLNGPR
Trigger: CCTGGGGCCATTGAGCCCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR CCA 90 bp GTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTaGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGGCTCAATGGCC +
Preference number: 1 (lower is better)
Translates to: VLHLPWCHHSPDSGH*PANAPGPWRLGSMA
Trigger: GGCCATTGAGCCCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR CCA 90 bp GTACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTaGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGGCTC +
Preference number: 1 (lower is better)
Translates to: VPGAPPALVPSQPGQ*PLACKRARALEAGL
Trigger: GAGCCCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGTAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR CCA 90 bp GACCCCCGCGGGAAAGCCTGGTGGGAAGCCCAGCTGTGTGGTACCTaGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCC +
Preference number: 1 (lower is better)
Translates to: DPRGKAWWEAQLCGT*CSTCLGAITARTVA
Trigger: GGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGTACCACACAGCTGGGCTTCCCACCAGGCTTTCCCGCGGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 90 bp GTGGGAAGCCCAGCTGTGTGGTACCTGGTGCTCCACCTGCCTTGGTaGCATCACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCC +
Preference number: 1 (lower is better)
Translates to: VGSPAVWYLVLHLPW*HHSPDSGHWPANAP
Trigger: GGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGTACCACACAGCTGGGCTTCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 90 bp CCCCGCGGGAAAGCCTGGTGGGAAGCCCAGCTGTGTGGTACCTGGTaGTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACT +
Preference number: 1 (lower is better)
Translates to: PRGKAWWEAQLCGTW*STCLGAITARTVAT
Trigger: AGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGTACCACACAGCTGGGCTTCCCACCAGGCTTTCCCGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 90 bp GCCCAGCAGAGCAGGACTGGGCAGGGTTGGTCACCTTGCCCCGGCTaGCTTGCCACTCTGTCCCTGCTGGCATCACCCCCTCAGACACCA +
Preference number: 1 (lower is better)
Translates to: AQQSRTGQGWSPCPG*LATLSLLASPPQTP
Trigger: TGGTGTCTGAGGGGGTGATGCCAGCAGGGACAGAGTGGCAAGGCAGCCGGGGCAAGGTGACCAACCCTGCCCAGTCCTGCTCTGCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR CCA 90 bp TCCTGTCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTaGCTCCCCCACGGTCGCAGTCGCTGCACTGTCCAGCTCCAGCCA +
Preference number: 1 (lower is better)
Translates to: SCPCSLSLAAAKRAT*LPHGRSRCTVQLQP
Trigger: TGGCTGGAGCTGGACAGTGCAGCGACTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGACAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 90 bp ACCTCAGCTCAGAAGCACACGGAGGGTGCCTGGTGTTCCTGTCCATaGAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCC +
Preference number: 1 (lower is better)
Translates to: TSAQKHTEGAWCSCP*SLSLAAAKRATWLP
Trigger: GGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGACAGGAACACCAGGCACCCTCCGTGTGCTTCTGAGCTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 90 bp AAAGCCTGGTGGGAAGCCCAGCTGTGTGGTACCTGGTGCTCCACCTaGCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAA +
Preference number: 1 (lower is better)
Translates to: KAWWEAQLCGTWCST*LGAITARTVATGLQ
Trigger: TTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGTACCACACAGCTGGGCTTCCCACCAGGCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR TCA 90 bp GTCCCAAAGCTCCAGTTAAGTGAGAGGGTAGGGCAGGAGCTGGGATaGCCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGA +
Preference number: 1 (lower is better)
Translates to: VPKLQLSERVGQELG*PPFLSQEMQHWGPG
Trigger: TCCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCCTGCCCTACCCTCTCACTTAACTGGAGCTTTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR CCA 90 bp ATAGGACCAGACACCACCACACCAGCTAGGCTCGGAGCACACAACTaGGTCCCTGAAACCCTCAGGAACTTGTTTCTGTCCTGCCTTCTG +
Preference number: 1 (lower is better)
Translates to: IGPDTTTPARLGAHN*VPETLRNLFLSCLL
Trigger: CAGAAGGCAGGACAGAAACAAGTTCCTGAGGGTTTCAGGGACCCAGTTGTGTGCTCCGAGCCTAGCTGGTGTGGTGGTGTCTGGTCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR TCA 90 bp CTCTGCTGGTATAAACAGTCCCCCATCTGTGACATCACCTGGGCCTaGCTGGCCCCACCCTTAGTTGCATGTTTGTCACAGGCTATCTGC +
Preference number: 1 (lower is better)
Translates to: LCWYKQSPICDITWA*LAPPLVACLSQAIC
Trigger: GCAGATAGCCTGTGACAAACATGCAACTAAGGGTGGGGCCAGTCAGGCCCAGGTGATGTCACAGATGGGGGACTGTTTATACCAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR TCA 90 bp ACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGTaGCTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATA +
Preference number: 1 (lower is better)
Translates to: TSLPTGVNKPLQLQQ*LPGKDSARIHPHLI
Trigger: TATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 90 bp ATTAGTAACCTGATGGAAAGCACGCTGGAGTTGGACGGCCTGGTTTaGATCTGCTTCTACCACCTTTGTTATTTCGGCAGTCCTCAGTCT +
Preference number: 1 (lower is better)
Translates to: ISNLMESTLELDGLV*ICFYHLCYFGSPQS
Trigger: AGACTGAGGACTGCCGAAATAACAAAGGTGGTAGAAGCAGATGCAAACCAGGCCGTCCAACTCCAGCGTGCTTTCCATCAGGTTACTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR TCA 90 bp CTTTTTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTaGACAAGCCACTGCAACTTCAACAGTGACTTCCCGGCAAGGACA +
Preference number: 1 (lower is better)
Translates to: LFNARRKSSLLFPQV*TSHCNFNSDFPART
Trigger: TGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGGAGGGGGAGGCGGCCTaGACTGGCCCGGGCCACTGG +
Preference number: 2 (lower is better)
Translates to: TARTVATGLQTRPGPGGWEGEAA*TGPGHW
Trigger: CCAGTGGCCCGGGCCAGTTCAGGCCGCCTCCCCCTC...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGCCTCCCGGCCGGGCGTaGAAATGGCAGGTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: PASVTAERGCASEPVGRGPPGRA*KWQVRG
Trigger: GCCCCGCACCTGCCATTTGCACGCCCGGCCGGGAGG...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGCCGTGCACACAGGGCTaGCACACAGGGGAGGCGGCG +
Preference number: 2 (lower is better)
Translates to: TARTVATGLQTRPGPGGWPCTQG*HTGEAA
Trigger: CGCCGCCTCCCCTGTGTGCCAGCCCTGTGTGCACGG...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCGAGGGGGAGGCGGCCTaGACTGGCCCGGGCCACTGG +
Preference number: 2 (lower is better)
Translates to: TWCSTCLGAITARTVATGEGEAA*TGPGHW
Trigger: CCAGTGGCCCGGGCCAGTTCAGGCCGCCTCCCCCTC...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCACTGCTGAGCGGGGTTaGGCGTCGGAGCCGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCTAERG*ASEPVG
Trigger: CCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGT...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCCCGTGCACACAGGGCTaGCACACAGGGGAGGCGGCG +
Preference number: 2 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCPCTQG*HTGEAA
Trigger: CGCCGCCTCCCCTGTGTGCCAGCCCTGTGTGCACGG...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR CAA 90 bp AGCAGAGCAGGACTGGGCAGGGTTGGTCACCTTGCCCCGGCTGCCTaGCCACTCTGTCCCTGCTGGCATCACCCCCTCAGACACCAGGGG +
Preference number: 2 (lower is better)
Translates to: SRAGLGRVGHLAPAA*PLCPCWHHPLRHQG
Trigger: CCCCTGGTGTCTGAGGGGGTGATGCCAGCAGGGACAGAGTGGCAAGGCAGCCGGGGCAAGGTGACCAACCCTGCCCAGTCCTGCTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR TCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGGGGCAGGAGCTGGGATaGCCACCCTTCCTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: WCSTCLGAITARTVATGLGQELG*PPFLSQ
Trigger: CTGGCTGAGGAAGGGTGGTCATCCCAGCTCCTGCCC...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGTGGTGTTCCTGTCCATaGAGCCTCAGCCTAGCAGCT +
Preference number: 2 (lower is better)
Translates to: TARTVATGLQTRPGPGGWWCSCP*SLSLAA
Trigger: AGCTGCTAGGCTGAGGCTGCATGGACAGGAACACCA...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR CAA 90 bp CCTGGTGGGAAGCCCAGCTGTGTGGTACCTGGTGCTCCACCTGCCTaGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAAACGC +
Preference number: 2 (lower is better)
Translates to: PGGKPSCVVPGAPPA*VPSQPGQWPLACKR
Trigger: GCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGTACCACACAGCTGGGCTTCCCACCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCATGCTTCTGTGACTGCTaGGCGGGGTTGCGCGTCGGA +
Preference number: 2 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPCFCDC*AGLRVG
Trigger: TCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCA...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCTGCTTCTGTGACTGCTaGGCGGGGTTGCGCGTCGGA +
Preference number: 2 (lower is better)
Translates to: TWCSTCLGAITARTVATGCFCDC*AGLRVG
Trigger: TCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCA...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp GGGCCGGCCAGCCCTGCAGCAACTGAAGCATCCACTGGCACCTCAAGTGCTGGTGCCAAAAGGGCGACCTaGCTCCCCCACGGTCGCAGT +
Preference number: 2 (lower is better)
Translates to: GPASPAATEASTGTSSAGAKRAT*LPHGRS
Trigger: ACTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGC...ACCAGCACTTGAGGTGCCAGTGGATGCTTCAGTTGCTGCAGGGCTGGCCGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGACTGGCCCGGGCCACTaGGCCGCAAGGTTCTGGTTT +
Preference number: 2 (lower is better)
Translates to: WCSTCLGAITARTVATGLTGPGH*AARFWF
Trigger: AAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGT...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACTGCTGAGCGGGGTTaGGCGTCGGAGCCGGTGGGG +
Preference number: 2 (lower is better)
Translates to: HCNFNSDFPARTAPASILTAERG*ASEPVG
Trigger: CCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGT...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp CTCTGTCCCTGCTGGCATCACCCCCTCAGACACCAGGGGAGGATGGCCCAGGACACCTGGTGCTCCACCTaGCTTGGTGCCATCACAGCC +
Preference number: 2 (lower is better)
Translates to: LCPCWHHPLRHQGRMAQDTWCST*LGAITA
Trigger: GGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT...GTCCTGGGCCATCCTCCCCTGGTGTCTGAGGGGGTGATGCCAGCAGGGACAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCACACGGAGGGTGCCTaGTGTTCCTGTCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: WCSTCLGAITARTVATGLHTEGA*CSCPCS
Trigger: GCTGCATGGACAGGAACACCAGGCACCCTCCGTGTG...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCCCTCAGCCTAGCAGCTaGCAAAAGGGCGACCTGGCT +
Preference number: 2 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCPQPSS*QKGDLA
Trigger: AGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGG...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCAGAAGCACACGGAGGGTaGCTGGTGTTCCTGTCCATG +
Preference number: 2 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPEAHGG*LVFLSM
Trigger: CATGGACAGGAACACCAGGCACCCTCCGTGTGCTTC...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGGCCAAAAGGGCGACCTaGCTCCCCCACGGTCGCAGT +
Preference number: 2 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLAKRAT*LPHGRS
Trigger: ACTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGC...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAGGAAATGCAACACTaGGGTCCAGGAACGGGGTGC +
Preference number: 2 (lower is better)
Translates to: WCSTCLGAITARTVATGLQEMQH*GPGTGC
Trigger: GCACCCCGTTCCTGGACCCCAGTGTTGCATTTCCTG...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp GTACTTAAACCGTCCTTGGGGCTAGCAAGGAGCCAGTCTGGCTCCAAAGCCCAGCCGGGCCCTGGAGGCTaGGCTCAATGGCCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: VLKPSLGLARSQSGSKAQPGPGG*AQWPQA
Trigger: TGCCTGGGGCCATTGAGCCCAGCCTCCAGGGCCCGG...CTGGGCTTTGGAGCCAGACTGGCTCCTTGCTAGCCCCAAGGACGGTTTAAGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CCA 90 bp CCAGCCCTGCAGCAACTGAAGCATCCACTGGCACCTCAAGTGCTGGTCATAGGAAACGCGCCCGGGCCCTaGAGGCTGGGCTCAATGGCC +
Preference number: 2 (lower is better)
Translates to: PALQQLKHPLAPQVLVIGNAPGP*RLGSMA
Trigger: GGCCATTGAGCCCAGCCTCCAGGGCCCGGGCGCGTT...TCCTATGACCAGCACTTGAGGTGCCAGTGGATGCTTCAGTTGCTGCAGGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR TCA 90 bp GTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGAGTCTTTATGGACCTTaGGAAATGGTGAGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: VPSQPGQWPLACKRARALSLYGP*EMVRLP
Trigger: GGGAAGCCTCACCATTTCTCAAGGTCCATAAAGACT...CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACGGGCAGGAGCTGGGATaGCCACCCTTCCTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNGQELG*PPFLSQ
Trigger: CTGGCTGAGGAAGGGTGGTCATCCCAGCTCCTGCCC...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGCACGGTCGCAGTCGCTaGACTGTCCAGCTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRHGRSR*TVQLQP
Trigger: TGGCTGGAGCTGGACAGTGCAGCGACTGCGACCGTG...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGTGGTGTTCCTGTCCATaGAGCCTCAGCCTAGCAGCT +
Preference number: 2 (lower is better)
Translates to: WCSTCLGAITARTVATGLWCSCP*SLSLAA
Trigger: AGCTGCTAGGCTGAGGCTGCATGGACAGGAACACCA...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCGAAGCACACGGAGGGTaGCTGGTGTTCCTGTCCATG +
Preference number: 2 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCEAHGG*LVFLSM
Trigger: CATGGACAGGAACACCAGGCACCCTCCGTGTGCTTC...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGTCCCACTGTGGAGGGTaGGTCCCAAAGCTCCAGTTA +
Preference number: 2 (lower is better)
Translates to: WCSTCLGAITARTVATGLSHCGG*VPKLQL
Trigger: TAACTGGAGCTTTGGGACGCACCCTCCACAGTGGGA...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTACACCTAATGCCCCCTaGGCAGGGCTGCTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: HWAARFWFLIAQPGGQGRTPNAP*AGLLLG
Trigger: GCCAAGGAGCAGCCCTGCCCAGGGGGCATTAGGTGT...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTAACGCGCCCGGGCCCTaGAGGCTGGGCTCAATGGCC +
Preference number: 2 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSNAPGP*RLGSMA
Trigger: GGCCATTGAGCCCAGCCTCCAGGGCCCGGGCGCGTT...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTCCGGACAGTGGCCACTaGCCTGCAAACGCGCCCGGG +
Preference number: 2 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSPDSGH*PANAPG
Trigger: CCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGG...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCCCCCGCGGGAAAGCCTaGTGGGAAGCCCAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: HCNFNSDFPARTAPASILPRGKA*WEAQLC
Trigger: ACACAGCTGGGCTTCCCACCAGGCTTTCCCGCGGGG...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCAAAAGCTCCAGTTAAGTaGGAGGGTAGGGCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPKAPVK*EGRAGA
Trigger: AGCTCCTGCCCTACCCTCTCACTTAACTGGAGCTTT...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCAAAGCTCCAGTTAAGTaGGAGGGTAGGGCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: TWCSTCLGAITARTVATGKAPVK*EGRAGA
Trigger: AGCTCCTGCCCTACCCTCTCACTTAACTGGAGCTTT...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGCACACGGAGGGTGCCTaGTGTTCCTGTCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRHTEGA*CSCPCS
Trigger: GCTGCATGGACAGGAACACCAGGCACCCTCCGTGTG...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACACCTAATGCCCCCTaGGCAGGGCTGCTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: HCNFNSDFPARTAPASILTPNAP*AGLLLG
Trigger: GCCAAGGAGCAGCCCTGCCCAGGGGGCATTAGGTGT...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCCGCGGGAAAGCCTGGTaGGAAGCCCAGCTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: HCNFNSDFPARTAPASILRGKAW*EAQLCG
Trigger: ACCACACAGCTGGGCTTCCCACCAGGCTTTCCCGCG...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGGAAGCCACGGTCCCGTaGAGCAACCTCAGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: GAGMTTLPQPGNATLGSREATVP*SNLSSE
Trigger: TTCTGAGCTGAGGTTGCTTCACGGGACCGTGGCTTC...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp CACAGGTGTGAACAAGCCACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGGGTCCAGGAACGGGGTaGTCCCCGGGTACCCACACC +
Preference number: 2 (lower is better)
Translates to: HRCEQATATSTVTSRQGQGPGTG*SPGTHT
Trigger: GGTGTGGGTACCCGGGGAGCACCCCGTTCCTGGACC...CTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCCTCCACCTGCCTTGGTaGCATCACAGCCCGGACAGT +
Preference number: 2 (lower is better)
Translates to: HCNFNSDFPARTAPASILLHLPW*HHSPDS
Trigger: ACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAG...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACCACACGGAGGGTGCCTaGTGTTCCTGTCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNHTEGA*CSCPCS
Trigger: GCTGCATGGACAGGAACACCAGGCACCCTCCGTGTG...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTCCTCCCGGCCGGGCGTaGAAATGGCAGGTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: QGESLHFSSHRCEQATATPPGRA*KWQVRG
Trigger: GCCCCGCACCTGCCATTTGCACGCCCGGCCGGGAGG...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGCTTTTGAACAGTGGTTaGGAAGTTATTGGGAACTTT +
Preference number: 2 (lower is better)
Translates to: TARTVATGLQTRPGPGGWLLNSG*EVIGNF
Trigger: AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAG...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp GTACTTAAACCGTCCTTGGGGCTAGCAAGGAGCCAGTCTGGCTCCAAAGCCCAGCACCACCTCCCACTGTaGAGGGTGCGTCCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: VLKPSLGLARSQSGSKAQHHLPL*RVRPKA
Trigger: AGCTTTGGGACGCACCCTCCACAGTGGGAGGTGGTG...CTGGGCTTTGGAGCCAGACTGGCTCCTTGCTAGCCCCAAGGACGGTTTAAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CCA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTTCACAGCCCGGACAGTaGCCACTGGCCTGCAAACGC +
Preference number: 2 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSSQPGQ*PLACKR
Trigger: GCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGA...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR CAA 90 bp CTGCTTTGTCTTCAGAGGCCCGGCTTCCCTGTACTTAAACCGTCCTaGGGGCTAGCAAGGAGCCAGTCTGGCTCCAAAGCCCAGAAACCC +
Preference number: 2 (lower is better)
Translates to: LLCLQRPGFPVLKPS*GLARSQSGSKAQKP
Trigger: GGGTTTCTGGGCTTTGGAGCCAGACTGGCTCCTTGCTAGCCCCAAGGACGGTTTAAGTACAGGGAAGCCGGGCCTCTGAAGACAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR TCA 90 bp CCAGCCCTGCAGCAACTGAAGCATCCACTGGCACCTCAAGTGCTGGTCATAGGAGAAGCCACGGTCCCGTaGAGCAACCTCAGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: PALQQLKHPLAPQVLVIGEATVP*SNLSSE
Trigger: TTCTGAGCTGAGGTTGCTTCACGGGACCGTGGCTTC...TCCTATGACCAGCACTTGAGGTGCCAGTGGATGCTTCAGTTGCTGCAGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CCA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGTCCTTGGCTGGAGGGTaGGAAGGGGAGACAAAAATC +
Preference number: 2 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLSLAGG*EGETKI
Trigger: GATTTTTGTCTCCCCTTCCCACCCTCCAGCCAAGGA...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp AAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTTTATCCTCCCGGCCGGGCGTaGAAATGGCAGGTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: KDGGFPFREARKHPLSLYPPGRA*KWQVRG
Trigger: GCCCCGCACCTGCCATTTGCACGCCCGGCCGGGAGG...ATAAAGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTGGTCCAGGAACGGGGTaGTCCCCGGGTACCCACACC +
Preference number: 2 (lower is better)
Translates to: QGESLHFSSHRCEQATATGPGTG*SPGTHT
Trigger: GGTGTGGGTACCCGGGGAGCACCCCGTTCCTGGACC...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp GAAGCATCCACTGGCACCTCAAGTGCTGGTCATAGGACCAGACACCACCACACCTCCCACTGTGGAGGGTaGGTCCCAAAGCTCCAGTTA +
Preference number: 2 (lower is better)
Translates to: EASTGTSSAGHRTRHHHTSHCGG*VPKLQL
Trigger: TAACTGGAGCTTTGGGACGCACCCTCCACAGTGGGA...GGTGTGGTGGTGTCTGGTCCTATGACCAGCACTTGAGGTGCCAGTGGATGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCCGCTCAGTCTTTATaGACCTTGAGAAATGGTGAG +
Preference number: 2 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCSAQSL*TLRNGE
Trigger: CTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGA...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTGGAGGCTGGGCTCAATaGCCCCAGGCAGAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: QGESLHFSSHRCEQATATGGWAQ*PQAEEG
Trigger: CCCCTCCTCTGCCTGGGGCCATTGAGCCCAGCCTCC...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp GCAGTCCTCAGTCTCGGACTCTCCCTCTGTGAAATGGGGGAACATGAACTTCCTGTGAATGCCCACAGGTaGCAGCTGAGTGACGCAGGG +
Preference number: 2 (lower is better)
Translates to: AVLSLGLSLCEMGEHELPVNAHR*QLSDAG
Trigger: CCCTGCGTCACTCAGCTGCCACCTGTGGGCATTCAC...AGGAAGTTCATGTTCCCCCATTTCACAGAGGGAGAGTCCGAGACTGAGGACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR TCA 90 bp GAAGCATCCACTGGCACCTCAAGTGCTGGTCATAGGACCAGACACCACCACACCAAAGCTCCAGTTAAGTaGGAGGGTAGGGCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: EASTGTSSAGHRTRHHHTKAPVK*EGRAGA
Trigger: AGCTCCTGCCCTACCCTCTCACTTAACTGGAGCTTT...GGTGTGGTGGTGTCTGGTCCTATGACCAGCACTTGAGGTGCCAGTGGATGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR GCA 90 bp CTGCTGCCCCTGGAAAAGACAAGGAAGCACCCGAAGCTTTCGCACAGTTCAGACTGGTGTTCCTGTCCATaGAGCCTCAGCCTAGCAGCT +
Preference number: 2 (lower is better)
Translates to: LLPLEKTRKHPKLSHSSDWCSCP*SLSLAA
Trigger: AGCTGCTAGGCTGAGGCTGCATGGACAGGAACACCA...GTCTGAACTGTGCGAAAGCTTCGGGTGCTTCCTTGTCTTTTCCAGGGGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR GCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTACTGCTGAGCGGGGTTaGGCGTCGGAGCCGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LMQGESLHFSSHRCEQATTAERG*ASEPVG
Trigger: CCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGT...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTGACATCCAAGTGAGCTaGCCTCCTTTGCTAAACAGA +
Preference number: 2 (lower is better)
Translates to: HWAARFWFLIAQPGGQGRDIQVS*PPLLNR
Trigger: TCTGTTTAGCAAAGGAGGGCAGCTCACTTGGATGTC...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTCAGTGGCCACTGGCCTaGAAACGCGCCCGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: LMQGESLHFSSHRCEQATQWPLA*KRARAL
Trigger: CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTG...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGTGGTTGGGAAGTTATTaGGAACTTTGGTCAAGTATG +
Preference number: 2 (lower is better)
Translates to: WCSTCLGAITARTVATGLWLGSY*ELWSSM
Trigger: CATACTTGACCAAAGTTCCCAATAACTTCCCAACCA...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp CACAGGTGTGAACAAGCCACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCAGGAAATGCAACACTaGGGTCCAGGAACGGGGTGC +
Preference number: 2 (lower is better)
Translates to: HRCEQATATSTVTSRQGQQEMQH*GPGTGC
Trigger: GCACCCCGTTCCTGGACCCCAGTGTTGCATTTCCTG...CTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCAAAAAATCACAGCTTTTaGACAGTGGTTGGGAAGTTA +
Preference number: 2 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPKNHSF*TVVGKL
Trigger: TAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTT...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTGTTCTGGTTTCTTATTaGTCAACCTGGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSVLVSY*STWGPG
Trigger: CCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAAC...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGGCCAAAAGGGCGACCTaGCTCCCCCACGGTCGCAGT +
Preference number: 2 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQAKRAT*LPHGRS
Trigger: ACTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGC...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCACTTTTGAACAGTGGTTaGGAAGTTATTGGGAACTTT +
Preference number: 2 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPLLNSG*EVIGNF
Trigger: AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAG...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTTTTGAACAGTGGTTaGGAAGTTATTGGGAACTTT +
Preference number: 2 (lower is better)
Translates to: TWCSTCLGAITARTVATGLLNSG*EVIGNF
Trigger: AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAG...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp CTGCTGCCCCTGGAAAAGACAAGGAAGCACCCGAAGCTTTCGCACAGTTCAGACTCCTTGGCTGGAGGGTaGGAAGGGGAGACAAAAATC +
Preference number: 2 (lower is better)
Translates to: LLPLEKTRKHPKLSHSSDSLAGG*EGETKI
Trigger: GATTTTTGTCTCCCCTTCCCACCCTCCAGCCAAGGA...GTCTGAACTGTGCGAAAGCTTCGGGTGCTTCCTTGTCTTTTCCAGGGGCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CCA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCACAGCCCGGACAGTaGCCACTGGCCTGCAAACGC +
Preference number: 2 (lower is better)
Translates to: QGESLHFSSHRCEQATATSQPGQ*PLACKR
Trigger: GCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGA...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp GAAGCATCCACTGGCACCTCAAGTGCTGGTCATAGGACCAGACACCACCACACCAGTCTTTATGGACCTTaGGAAATGGTGAGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: EASTGTSSAGHRTRHHHTSLYGP*EMVRLP
Trigger: GGGAAGCCTCACCATTTCTCAAGGTCCATAAAGACT...GGTGTGGTGGTGTCTGGTCCTATGACCAGCACTTGAGGTGCCAGTGGATGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR TCA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTCCCGCTGTCTGGACATaGGAGCCTAGCCAGAACCAC +
Preference number: 2 (lower is better)
Translates to: QGESLHFSSHRCEQATATPAVWT*EPSQNH
Trigger: GTGGTTCTGGCTAGGCTCTCATGTCCAGACAGCGGG...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR GCA 90 bp CACAGGTGTGAACAAGCCACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGGTTCTGGTTTCTTATTaGTCAACCTGGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: HRCEQATATSTVTSRQGQVLVSY*STWGPG
Trigger: CCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAAC...CTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp CACCTGGGCCTGACTGGCCCCACCCTTAGTTGCATGTTTGTCACAGGCTATCTGTGGGCCGCAAGGTTCTaGTTTCTTATTGCTCAACCT +
Preference number: 2 (lower is better)
Translates to: HLGLTGPTLSCMFVTGYLWAARF*FLIAQP
Trigger: AGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCA...CAGATAGCCTGTGACAAACATGCAACTAAGGGTGGGGCCAGTCAGGCCCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR TCA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGCCCGCTGTCTGGACATaGGAGCCTAGCCAGAACCAC +
Preference number: 2 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQPAVWT*EPSQNH
Trigger: GTGGTTCTGGCTAGGCTCTCATGTCCAGACAGCGGG...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp CAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTTGTAAGGACAAGTCTTTATGGACCTTaGGAAATGGTGAGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: QGSGFLLLNLGARGVVRTSLYGP*EMVRLP
Trigger: GGGAAGCCTCACCATTTCTCAAGGTCCATAAAGACT...TGTCCTTACAACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp TCTGCACCCTTTTATGAAGGGTCACTAATCAGTCACCCTTCCCTCTGCTGGTATCTCTTCCCACAGGTGTaGACAAGCCACTGCAACTTC +
Preference number: 2 (lower is better)
Translates to: SAPFYEGSLISHPSLCWYLFPQV*TSHCNF
Trigger: GAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAG...ATACCAGCAGAGGGAAGGGTGACTGATTAGTGACCCTTCATAAAAGGGTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR GCA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGTCCCACTGTGGAGGGTaGGTCCCAAAGCTCCAGTTA +
Preference number: 2 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQSHCGG*VPKLQL
Trigger: TAACTGGAGCTTTGGGACGCACCCTCCACAGTGGGA...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp GCAGTCCTCAGTCTCGGACTCTCCCTCTGTGAAATGGGGGAACATGAACTTCCTTCCGCTCAGTCTTTATaGACCTTGAGAAATGGTGAG +
Preference number: 2 (lower is better)
Translates to: AVLSLGLSLCEMGEHELPSAQSL*TLRNGE
Trigger: CTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGA...AGGAAGTTCATGTTCCCCCATTTCACAGAGGGAGAGTCCGAGACTGAGGACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTCAGCTGTGTGGTACCTaGTGCTCCACCTGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: LMQGESLHFSSHRCEQATQLCGT*CSTCLG
Trigger: ACCAAGGCAGGTGGAGCACCAGGTACCACACAGCTG...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTTCCGCTCAGTCTTTATaGACCTTGAGAAATGGTGAG +
Preference number: 2 (lower is better)
Translates to: LMQGESLHFSSHRCEQATSAQSL*TLRNGE
Trigger: CTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGA...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR TCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTAAAAATCACAGCTTTTaGACAGTGGTTGGGAAGTTA +
Preference number: 2 (lower is better)
Translates to: LMQGESLHFSSHRCEQATKNHSF*TVVGKL
Trigger: TAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTT...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 72 bp TGGCTGGGCCCTGCTTCTGTGACTGCTGAGCGGGGTTaGGCGTCGGAGCCGGTGGGGCGCGGGAGGAAAGGG +
Preference number: 3 (lower is better)
Translates to: WLGPASVTAERG*ASEPVGRGRKG
Trigger: CCCTTTCCTCCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGGGCCCAGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR CCA 72 bp CTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTaGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: LPWCHHSPDSGH*PANAPGPWRLG
Trigger: GCCCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR TCA 72 bp AAGACCAAGGTGGCTGGGCCCTGCTTCTGTGACTGCTaGGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGG +
Preference number: 3 (lower is better)
Translates to: KTKVAGPCFCDC*AGLRVGAGGAR
Trigger: CCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGGGCCCAGCCACCTTGGTCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR CCA 72 bp GCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTaGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: APPALVPSQPGQ*PLACKRARALE
Trigger: CTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 72 bp TTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTaGAAACGCGCCCGGGCCCTGGAGGCTGGGCTCAAT +
Preference number: 3 (lower is better)
Translates to: LVPSQPGQWPLA*KRARALEAGLN
Trigger: ATTGAGCCCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 72 bp GACTGGGCAGGGTTGGTCACCTTGCCCCGGCTGCCTTaGCACTCTGTCCCTGCTGGCATCACCCCCTCAGAC +
Preference number: 3 (lower is better)
Translates to: DWAGLVTLPRLP*HSVPAGITPSD
Trigger: GTCTGAGGGGGTGATGCCAGCAGGGACAGAGTGGCAAGGCAGCCGGGGCAAGGTGACCAACCCTGCCCAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR CCA 72 bp TGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTaGCTCCCCCACGGTCGCAGTCGCTGCACTGTCCAG +
Preference number: 3 (lower is better)
Translates to: CSLSLAAAKRAT*LPHGRSRCTVQ
Trigger: CTGGACAGTGCAGCGACTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CAA 90 bp GTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGTGAGCTGCCCTCCTTaGCTAAACAGAGGAGGAAGG +
Preference number: 3 (lower is better)
Translates to: VPSQPGQWPLACKRARALVSCPP*LNRGGR
Trigger: CCTTCCTCCTCTGTTTAGCAAAGGAGGGCAGCTCAC...CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR CCA 72 bp GGGAAAGCCTGGTGGGAAGCCCAGCTGTGTGGTACCTaGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGG +
Preference number: 3 (lower is better)
Translates to: GKAWWEAQLCGT*CSTCLGAITAR
Trigger: CCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGTACCACACAGCTGGGCTTCCCACCAGGCTTTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 72 bp TGGGAAGCCCAGCTGTGTGGTACCTGGTGCTCCACCTaGCTTGGTGCCATCACAGCCCGGACAGTGGCCACT +
Preference number: 3 (lower is better)
Translates to: WEAQLCGTWCST*LGAITARTVAT
Trigger: AGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGTACCACACAGCTGGGCTTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 72 bp CAGAAGCACACGGAGGGTGCCTGGTGTTCCTGTCCATaGAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACC +
Preference number: 3 (lower is better)
Translates to: QKHTEGAWCSCP*SLSLAAAKRAT
Trigger: GGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGACAGGAACACCAGGCACCCTCCGTGTGCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 72 bp AAAGCCTGGTGGGAAGCCCAGCTGTGTGGTACCTGGTaGTCCACCTGCCTTGGTGCCATCACAGCCCGGACA +
Preference number: 3 (lower is better)
Translates to: KAWWEAQLCGTW*STCLGAITART
Trigger: TGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGTACCACACAGCTGGGCTTCCCACCAGGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 72 bp CTGCAGGTGCCCACTCATCCGTCTGTGGCTGAGGGGTaGCAGCCTAGGCCTCAGCTATCAACATCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: LQVPTHPSVAEG*QPRPQLSTSSQ
Trigger: TTGGGAGGATGTTGATAGCTGAGGCCTAGGCTGGCACCCCTCAGCCACAGACGGATGAGTGGGCACCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CAA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTGTGAGCTGCCCTCCTTaGCTAAACAGAGGAGGAAGG +
Preference number: 3 (lower is better)
Translates to: HWAARFWFLIAQPGGQGRVSCPP*LNRGGR
Trigger: CCTTCCTCCTCTGTTTAGCAAAGGAGGGCAGCTCAC...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CAA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCCAGTCTTTATGGACCTaGAGAAATGGTGAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCQSLWT*RNGEAS
Trigger: GGAAGCCTCACCATTTCTCAAGGTCCATAAAGACTG...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 72 bp AAGCCCAGAAACCCTTGTTTACTTGATGCCACCCAGTaGCGAGGGCCTGCAGGTGCCCACTCATCCGTCTGT +
Preference number: 3 (lower is better)
Translates to: KPRNPCLLDATQ*RGPAGAHSSVC
Trigger: ACAGACGGATGAGTGGGCACCTGCAGGCCCTCGGCACTGGGTGGCATCAAGTAAACAAGGGTTTCTGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR TCA 72 bp CTCCAGTTAAGTGAGAGGGTAGGGCAGGAGCTGGGATaGCCACCCTTCCTCAGCCAGGAAATGCAACACTGG +
Preference number: 3 (lower is better)
Translates to: LQLSERVGQELG*PPFLSQEMQHW
Trigger: CCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCCTGCCCTACCCTCTCACTTAACTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 72 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTaGCCTCCTTTGCTAAACAGAGGAGGAAGGAAGGTA +
Preference number: 3 (lower is better)
Translates to: GGQGRCKDIQVS*PPLLNRGGRKV
Trigger: TACCTTCCTTCCTCCTCTGTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CAA 90 bp CTCTGTCCCTGCTGGCATCACCCCCTCAGACACCAGGGGAGGATGGCCCAGGACCAAAAATCACAGCTTTaGAACAGTGGTTGGGAAGTT +
Preference number: 3 (lower is better)
Translates to: LCPCWHHPLRHQGRMAQDQKSQL*NSGWEV
Trigger: AACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTG...GTCCTGGGCCATCCTCCCCTGGTGTCTGAGGGGGTGATGCCAGCAGGGACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CAA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTGGTTCTGGTTTCTTATaGCTCAACCTGGGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSGSGFL*LNLGAR
Trigger: CCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACC...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR TCA 72 bp TCTGTGAAATGGGGGAACATGAACTTCCTCAGATCGTaGCAGCGCAGCTCCACCTGGCACAGGGTGAATGCC +
Preference number: 3 (lower is better)
Translates to: SVKWGNMNFLRS*QRSSTWHRVNA
Trigger: GGCATTCACCCTGTGCCAGGTGGAGCTGCGCTGTCACGATCTGAGGAAGTTCATGTTCCCCCATTTCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CAA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACCAGTCTTTATGGACCTaGAGAAATGGTGAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNQSLWT*RNGEAS
Trigger: GGAAGCCTCACCATTTCTCAAGGTCCATAAAGACTG...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CAA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGGGTGCTCCACCTGCCTaGGTGCCATCACAGCCCGGA +
Preference number: 3 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQGAPPA*VPSQPG
Trigger: TCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACC...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR TCA 72 bp TATAAACAGTCCCCCATCTGTGACATCACCTGGGCCTaGCTGGCCCCACCCTTAGTTGCATGTTTGTCACAG +
Preference number: 3 (lower is better)
Translates to: YKQSPICDITWA*LAPPLVACLSQ
Trigger: CTGTGACAAACATGCAACTAAGGGTGGGGCCAGTCAGGCCCAGGTGATGTCACAGATGGGGGACTGTTTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR GCA 72 bp GCCCCACCCTTAGTTGCATGTTTGTCACAGGCTATCTaGTTTGTCTTCAGAGGCCCGGCTTCCCTGTACTTA +
Preference number: 3 (lower is better)
Translates to: APPLVACLSQAI*FVFRGPASLYL
Trigger: TAAGTACAGGGAAGCCGGGCCTCTGAAGACAAAGCAGATAGCCTGTGACAAACATGCAACTAAGGGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CAA 90 bp CACAGGTGTGAACAAGCCACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCAGTCTTTATGGACCTaGAGAAATGGTGAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: HRCEQATATSTVTSRQGQQSLWT*RNGEAS
Trigger: GGAAGCCTCACCATTTCTCAAGGTCCATAAAGACTG...CTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 72 bp CTGATGGAAAGCACGCTGGAGTTGGACGGCCTGGTTTaGATCTGCTTCTACCACCTTTGTTATTTCGGCAGT +
Preference number: 3 (lower is better)
Translates to: LMESTLELDGLV*ICFYHLCYFGS
Trigger: ACTGCCGAAATAACAAAGGTGGTAGAAGCAGATGCAAACCAGGCCGTCCAACTCCAGCGTGCTTTCCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CAA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGGTGAGCTGCCCTCCTTaGCTAAACAGAGGAGGAAGG +
Preference number: 3 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQVSCPP*LNRGGR
Trigger: CCTTCCTCCTCTGTTTAGCAAAGGAGGGCAGCTCAC...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR TCA 72 bp GCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTaGACAAGCCACTGCAACTTCAACAGTGACTTCCCG +
Preference number: 3 (lower is better)
Translates to: ARRKSSLLFPQV*TSHCNFNSDFP
Trigger: CGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR CCA 72 bp TATGAAGGGTCACTAATCAGTCACCCTTCCCTCTGCTaGTATAAACAGTCCCCCATCTGTGACATCACCTGG +
Preference number: 3 (lower is better)
Translates to: YEGSLISHPSLC*YKQSPICDITW
Trigger: CCAGGTGATGTCACAGATGGGGGACTGTTTATACCAGCAGAGGGAAGGGTGACTGATTAGTGACCCTTCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CAA 90 bp CACAGGTGTGAACAAGCCACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGGCTTTTGAACAGTGGTaGGGAAGTTATTGGGAACTT +
Preference number: 3 (lower is better)
Translates to: HRCEQATATSTVTSRQGQAFEQW*GSYWEL
Trigger: AAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGC...CTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR-3UTR CAA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTCAAAAATCACAGCTTTaGAACAGTGGTTGGGAAGTT +
Preference number: 3 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSQKSQL*NSGWEV
Trigger: AACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTG...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR GCA 72 bp TTTTATGAAGGGTCACTAATCAGTCACCCTTCCCTCTaGTGGTATAAACAGTCCCCCATCTGTGACATCACC +
Preference number: 3 (lower is better)
Translates to: FYEGSLISHPSL*WYKQSPICDIT
Trigger: GGTGATGTCACAGATGGGGGACTGTTTATACCAGCAGAGGGAAGGGTGACTGATTAGTGACCCTTCATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR-3UTR CAA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCTTTTGAACAGTGGTaGGGAAGTTATTGGGAACTT +
Preference number: 3 (lower is better)
Translates to: LMQGESLHFSSHRCEQATAFEQW*GSYWEL
Trigger: AAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGC...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGCCGCCGTTCGCCACGTaGGGTCCTCCAGCTGGCTCG +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGPPFAT*GPPAGS
Trigger: CGAGCCAGCTGGAGGACCGCACGTGGCGAACGGCGG...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359393.6
CDS-3UTR CCA 90 bp GTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGTGCCGGACACGGGGCTaGCTGCTGCGGGGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: VPSQPGQWPLACKRARALCRTRG*LLRGRA
Trigger: CGCTCTGCCCCGCAGCAGCCAGCCCCGTGTCCGGCA...CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGCCGGGCCCTGGAGGCTaGGCTCAATGGCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGPGPGG*AQWPQA
Trigger: TGCCTGGGGCCATTGAGCCCAGCCTCCAGGGCCCGG...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGTGGGCTCGGGCCCGATaGGCATCCCCGGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGWARAR*ASPGSP
Trigger: AGGACTTCCCGGGGATGCGCATCGGGCCCGAGCCCA...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGCAGTGGCCACTGGCCTaGAAACGCGCCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VPSQPGQWPLACKRARALQWPLA*KRARAL
Trigger: CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTG...CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGGGAGGCTGGGCTCAATaGCCCCAGGCAGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TARTVATGLQTRPGPGGWGGWAQ*PQAEEG
Trigger: CCCCTCCTCTGCCTGGGGCCATTGAGCCCAGCCTCC...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGAACGCGCCCGGGCCCTaGAGGCTGGGCTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: VPSQPGQWPLACKRARALNAPGP*RLGSMA
Trigger: GGCCATTGAGCCCAGCCTCCAGGGCCCGGGCGCGTT...CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGTTCTGCGCGTACAGCTaGCGCAGCCCCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: TARTVATGLQTRPGPGGWFCAYS*RSPSAT
Trigger: GGTGGCTGAGGGGCTGCGGCAGCTGTACGCGCAGAA...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGACGGCCCGTTCATGGTaGCGTCAAAGGCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGTARSW*RQRRRP
Trigger: AGGGCGGCGCCTTTGACGGCACCATGAACGGGCCGT...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGCCCCGCGGGAAAGCCTaGTGGGAAGCCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TARTVATGLQTRPGPGGWPRGKA*WEAQLC
Trigger: ACACAGCTGGGCTTCCCACCAGGCTTTCCCGCGGGG...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTCGCAGGGGAGCGACCCACACTaGGCAGGCGCACAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QPQPSSCQKGDLAPPRSQGSDPH*AGAQPS
Trigger: GCTGGGCTGTGCGCCTGCGCAGTGTGGGTCGCTCCC...CTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGCACGGTCGCAGTCGCTaGACTGTCCAGCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TARTVATGLQTRPGPGGWHGRSR*TVQLQP
Trigger: TGGCTGGAGCTGGACAGTGCAGCGACTGCGACCGTG...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGCAGGGTTGGTCACCTTaGCCCGGCTGCCTTGCCACT +
Preference number: 4 (lower is better)
Translates to: TARTVATGLQTRPGPGGWQGWSP*PGCLAT
Trigger: AGTGGCAAGGCAGCCGGGGCAAGGTGACCAACCCTG...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGCGCGGGAAAGCCTGGTaGGAAGCCCAGCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TARTVATGLQTRPGPGGWRGKAW*EAQLCG
Trigger: ACCACACAGCTGGGCTTCCCACCAGGCTTTCCCGCG...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CGCACGGGGAGCCTGGGCCCGGGAGGGGAAGGCACAAGAACCCACTTCGCCCGACAAAGGCGCCGCCCTTaGCCACCTGGGAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: RTGSLGPGGEGTRTHFARQRRRP*PPGKAS
Trigger: TGATGCCTTCCCAGGTGGTCAAGGGCGGCGCCTTTG...TCGGGCGAAGTGGGTTCTTGTGCCTTCCCCTCCCGGGCCCAGGCTCCCCGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGGCCATCACTCATGTCTaGGCTTGGAGGGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGAITHV*AWRAAP
Trigger: TGGTGCCGCCCTCCAAGCGCAGACATGAGTGATGGC...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTCGCAGGGTCCAGGAACGGGGTaGTCCCCGGGTACCCACACC +
Preference number: 4 (lower is better)
Translates to: QPQPSSCQKGDLAPPRSQGPGTG*SPGTHT
Trigger: GGTGTGGGTACCCGGGGAGCACCCCGTTCCTGGACC...CTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGCTCCACCTGCCTTGGTaGCATCACAGCCCGGACAGT +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGLHLPW*HHSPDS
Trigger: ACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAG...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGACCTGGTGCTCCACCTaGCTTGGTGCCATCACAGCC +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGTWCST*LGAITA
Trigger: GGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGCTGTGTGGTACCTGGTaGTCCACCTGCCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGLCGTW*STCLGA
Trigger: GGCACCAAGGCAGGTGGAGCACCAGGTACCACACAG...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CGCACGGGGAGCCTGGGCCCGGGAGGGGAAGGCACAAGAACCCACTTCGCCCGAACTCATGTCTGCGCTTaGAGGGCGGCACCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: RTGSLGPGGEGTRTHFARTHVCA*RAAPGA
Trigger: CGCACCTGGTGCCGCCCTCCAAGCGCAGACATGAGT...TCGGGCGAAGTGGGTTCTTGTGCCTTCCCCTCCCGGGCCCAGGCTCCCCGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGCCGTGCACACAGGGCTaGCACACAGGGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRPCTQG*HTGEAA
Trigger: CGCCGCCTCCCCTGTGTGCCAGCCCTGTGTGCACGG...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGCACCACCTCCCACTGTaGAGGGTGCGTCCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGHHLPL*RVRPKA
Trigger: AGCTTTGGGACGCACCCTCCACAGTGGGAGGTGGTG...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGCCGGGCCCTGGAGGCTaGGCTCAATGGCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRPGPGG*AQWPQA
Trigger: TGCCTGGGGCCATTGAGCCCAGCCTCCAGGGCCCGG...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCAAACGCGCCCGGGCCCTaGAGGCTGGGCTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPNAPGP*RLGSMA
Trigger: GGCCATTGAGCCCAGCCTCCAGGGCCCGGGCGCGTT...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCACCGGACAGTGGCCACTaGCCTGCAAACGCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPPDSGH*PANAPG
Trigger: CCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGG...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CGCACGGGGAGCCTGGGCCCGGGAGGGGAAGGCACAAGAACCCACTTCGCCCGATCACAGCCCGGACAGTaGCCACTGGCCTGCAAACGC +
Preference number: 4 (lower is better)
Translates to: RTGSLGPGGEGTRTHFARSQPGQ*PLACKR
Trigger: GCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGA...TCGGGCGAAGTGGGTTCTTGTGCCTTCCCCTCCCGGGCCCAGGCTCCCCGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAGAGGGGGAGGCGGCCTaGACTGGCCCGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: PGGQGRCKDIQVSCPPLLEGEAA*TGPGHW
Trigger: CCAGTGGCCCGGGCCAGTTCAGGCCGCCTCCCCCTC...TAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTGAGGGGGAGGCGGCCTaGACTGGCCCGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: HWAARFWFLIAQPGGQGREGEAA*TGPGHW
Trigger: CCAGTGGCCCGGGCCAGTTCAGGCCGCCTCCCCCTC...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGTGGGGAGAAGCTCCCTaGGACCCCCGCGGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLWGEAP*DPRGKA
Trigger: GGCTTTCCCGCGGGGGTCTCAGGGAGCTTCTCCCCA...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCATGGGGAGAAGCTCCCTaGGACCCCCGCGGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPWGEAP*DPRGKA
Trigger: GGCTTTCCCGCGGGGGTCTCAGGGAGCTTCTCCCCA...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp GGGCCGGCCAGCCCTGCAGCAACTGAAGCATCCACTGGCACCTCAAGTGCTGGTCAGGTGGCAGCTGAGTaGCGCAGGGAGGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GPASPAATEASTGTSSAGQVAAE*RREGRP
Trigger: TGGCCGGCCCTCCCTGCGTCACTCAGCTGCCACCTG...ACCAGCACTTGAGGTGCCAGTGGATGCTTCAGTTGCTGCAGGGCTGGCCGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCACGTGCAAATGGCAGGTaGGGGGCCGGGCGCCATCAC +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPRANGR*GAGRHH
Trigger: GTGATGGCGCCCGGCCCCGCACCTGCCATTTGCACG...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGGAAGCACACGGAGGGTaGCTGGTGTTCCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGEAHGG*LVFLSM
Trigger: CATGGACAGGAACACCAGGCACCCTCCGTGTGCTTC...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGGGTCCAGGAACGGGGTaGTCCCCGGGTACCCACACC +
Preference number: 4 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRGPGTG*SPGTHT
Trigger: GGTGTGGGTACCCGGGGAGCACCCCGTTCCTGGACC...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGGAAGCCCAGCTGTGTaGTACCTGGTGCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: VPSQPGQWPLACKRARALGSPAV*YLVLHL
Trigger: CAGGTGGAGCACCAGGTACCACACAGCTGGGCTTCC...CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCGTTGCCAAACGCGTTaGGCTTGCGGAAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: TWCSTCLGAITARTVATGRCQTR*ACGRGA
Trigger: GGCGCCCCTTCCGCAAGCTCAACGCGTTTGGCAACG...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CGCACGGGGAGCCTGGGCCCGGGAGGGGAAGGCACAAGAACCCACTTCGCCCGAGAAGCCACGGTCCCGTaGAGCAACCTCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RTGSLGPGGEGTRTHFAREATVP*SNLSSE
Trigger: TTCTGAGCTGAGGTTGCTTCACGGGACCGTGGCTTC...TCGGGCGAAGTGGGTTCTTGTGCCTTCCCCTCCCGGGCCCAGGCTCCCCGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTTCTGCGCGTACAGCTaGCGCAGCCCCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRFCAYS*RSPSAT
Trigger: GGTGGCTGAGGGGCTGCGGCAGCTGTACGCGCAGAA...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGACGGCCCGTTCATGGTaGCGTCAAAGGCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRTARSW*RQRRRP
Trigger: AGGGCGGCGCCTTTGACGGCACCATGAACGGGCCGT...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCCTCCCGGCCGGGCGTaGAAATGGCAGGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLPPGRA*KWQVRG
Trigger: GCCCCGCACCTGCCATTTGCACGCCCGGCCGGGAGG...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCGAACGGCCCGTTCATaGTGCCGTCAAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TWCSTCLGAITARTVATGRTARS*CRQRRR
Trigger: GCGGCGCCTTTGACGGCACCATGAACGGGCCGTTCG...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGTCCCTAGCACGGTGTTaGGGAGCTTGGACTTCACCA +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGSLARC*GAWTSP
Trigger: TGGTGAAGTCCAAGCTCCCCAACACCGTGCTAGGGA...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGGCCAAAAGGGCGACCTaGCTCCCCCACGGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLAKRAT*LPHGRS
Trigger: ACTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGC...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGCAGGAAATGCAACACTaGGGTCCAGGAACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: VPSQPGQWPLACKRARALQEMQH*GPGTGC
Trigger: GCACCCCGTTCCTGGACCCCAGTGTTGCATTTCCTG...CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTCGCAGTCACAGCCCGGACAGTaGCCACTGGCCTGCAAACGC +
Preference number: 4 (lower is better)
Translates to: QPQPSSCQKGDLAPPRSQSQPGQ*PLACKR
Trigger: GCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGA...CTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CGCACGGGGAGCCTGGGCCCGGGAGGGGAAGGCACAAGAACCCACTTCGCCCGACAGCTGTGTGGTACCTaGTGCTCCACCTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RTGSLGPGGEGTRTHFARQLCGT*CSTCLG
Trigger: ACCAAGGCAGGTGGAGCACCAGGTACCACACAGCTG...TCGGGCGAAGTGGGTTCTTGTGCCTTCCCCTCCCGGGCCCAGGCTCCCCGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCCCCGCGGGAAAGCCTaGTGGGAAGCCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLPRGKA*WEAQLC
Trigger: ACACAGCTGGGCTTCCCACCAGGCTTTCCCGCGGGG...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTCGCAGTGCCGGACACGGGGCTaGCTGCAGTTCCTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QPQPSSCQKGDLAPPRSQCRTRG*LQFLAV
Trigger: AACAGCCAGGAACTGCAGCCAGCCCCGTGTCCGGCA...CTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621096.4
CDS-3UTR TCA 90 bp GAGCAGGACTGGGCAGGGTTGGTCACCTTGCCCCGGCTGCCTTGCCACTCTGTCCAAAGGCGCCGCCCTTaGCCACCTGGGAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: EQDWAGLVTLPRLPCHSVQRRRP*PPGKAS
Trigger: TGATGCCTTCCCAGGTGGTCAAGGGCGGCGCCTTTG...GACAGAGTGGCAAGGCAGCCGGGGCAAGGTGACCAACCCTGCCCAGTCCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCAAAGGCGCCGCCCTTaGCCACCTGGGAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: TWCSTCLGAITARTVATGQRRRP*PPGKAS
Trigger: TGATGCCTTCCCAGGTGGTCAAGGGCGGCGCCTTTG...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCACGGTCGCAGTCGCTaGACTGTCCAGCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TWCSTCLGAITARTVATGHGRSR*TVQLQP
Trigger: TGGCTGGAGCTGGACAGTGCAGCGACTGCGACCGTG...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGACTGCTGAGCGGGGTTaGGCGTCGGAGCCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLTAERG*ASEPVG
Trigger: CCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGT...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGACTGCTGAGCGGGGTTaGGCGTCGGAGCCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRTAERG*ASEPVG
Trigger: CCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGT...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CTCTGTCCCTGCTGGCATCACCCCCTCAGACACCAGGGGAGGATGGCCCAGGACTCACCTTGCCCCGGCTaGCTTGCCACTCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LCPCWHHPLRHQGRMAQDSPCPG*LATLSL
Trigger: CAGGGACAGAGTGGCAAGGCAGCCGGGGCAAGGTGA...GTCCTGGGCCATCCTCCCCTGGTGTCTGAGGGGGTGATGCCAGCAGGGACAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp CAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTCGCAGTCTGTGGCTGAGGGGTaGCAGCCTAGGCCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: QPQPSSCQKGDLAPPRSQSVAEG*QPRPQL
Trigger: TAGCTGAGGCCTAGGCTGGCACCCCTCAGCCACAGA...CTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCCCTCAGCCACCGTCTaGAAGAGCTCCGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TWCSTCLGAITARTVATGPSATV*KSSGSF
Trigger: GAAGGAGCCGGAGCTCTTCCAGACGGTGGCTGAGGG...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCCCTCAGCCACCGTCTaGAAGAGCTCCGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLPSATV*KSSGSF
Trigger: GAAGGAGCCGGAGCTCTTCCAGACGGTGGCTGAGGG...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCAGCCGCGCGATGTCGTTaGCCAGCATGTCATCCACCG +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPAARCR*PACHPP
Trigger: CGGTGGATGACATGCTGGCCAACGACATCGCGCGGC...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCCGTGCACACAGGGCTaGCACACAGGGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLPCTQG*HTGEAA
Trigger: CGCCGCCTCCCCTGTGTGCCAGCCCTGTGTGCACGG...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGCCGTGCACACAGGGCTaGCACACAGGGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRPCTQG*HTGEAA
Trigger: CGCCGCCTCCCCTGTGTGCCAGCCCTGTGTGCACGG...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CTCTGTCCCTGCTGGCATCACCCCCTCAGACACCAGGGGAGGATGGCCCAGGACACACCTAATGCCCCCTaGGCAGGGCTGCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LCPCWHHPLRHQGRMAQDTPNAP*AGLLLG
Trigger: GCCAAGGAGCAGCCCTGCCCAGGGGGCATTAGGTGT...GTCCTGGGCCATCCTCCCCTGGTGTCTGAGGGGGTGATGCCAGCAGGGACAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGACACCTAATGCCCCCTaGGCAGGGCTGCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLTPNAP*AGLLLG
Trigger: GCCAAGGAGCAGCCCTGCCCAGGGGGCATTAGGTGT...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTACCGGGCCCTGGAGGCTaGGCTCAATGGCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PGGQGRCKDIQVSCPPLLPGPGG*AQWPQA
Trigger: TGCCTGGGGCCATTGAGCCCAGCCTCCAGGGCCCGG...TAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTCCGGACAGTGGCCACTaGCCTGCAAACGCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: HWAARFWFLIAQPGGQGRPDSGH*PANAPG
Trigger: CCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGG...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGCGCGGGAAAGCCTGGTaGGAAGCCCAGCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRRGKAW*EAQLCG
Trigger: ACCACACAGCTGGGCTTCCCACCAGGCTTTCCCGCG...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTATGCCGGACACGGGGCTaGCTGCTGTTTCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PGGQGRCKDIQVSCPPLLCRTRG*LLFRPA
Trigger: GGCGGGGCGAAACAGCAGCCAGCCCCGTGTCCGGCA...TAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359393.6
CDS-3UTR CCA 90 bp CAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTCGCAGGCTGGCTGCAGTTCCTaGCTGTTCCATGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QPQPSSCQKGDLAPPRSQAGCSS*LFHGAH
Trigger: GTGAGCCCCATGGAACAGCCAGGAACTGCAGCCAGC...CTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621096.4
CDS-3UTR TCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCGATCAGGTGTCGGATaGAGGTGGTCTTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLRSGVG*RWSCPC
Trigger: GCACGGGCAAGACCACCTTCATCCGACACCTGATCG...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAGCCCTGCAGCAACTaGAGCATCCACTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLQPCSN*SIHWHL
Trigger: GAGGTGCCAGTGGATGCTTCAGTTGCTGCAGGGCTG...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCGGAGTTCCTGCATCTTaGGGAGGCTCGGGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: TWCSTCLGAITARTVATGGVPAS*GGSGSP
Trigger: GGGACTTCCCGAGCCTCCGCAAGATGCAGGAACTCC...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGCGTGCAAATGGCAGGTaGGGGGCCGGGCGCCATCAC +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRRANGR*GAGRHH
Trigger: GTGATGGCGCCCGGCCCCGCACCTGCCATTTGCACG...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCCACGGTCGCAGTCGCTaGACTGTCCAGCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCHGRSR*TVQLQP
Trigger: TGGCTGGAGCTGGACAGTGCAGCGACTGCGACCGTG...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCACCTCAGCCTAGCAGCTaGCAAAAGGGCGACCTGGCT +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPPQPSS*QKGDLA
Trigger: AGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGG...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGGGTCCAGGAACGGGGTaGTCCCCGGGTACCCACACC +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRGPGTG*SPGTHT
Trigger: GGTGTGGGTACCCGGGGAGCACCCCGTTCCTGGACC...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCACACCACCTCCCACTGTaGAGGGTGCGTCCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPHHLPL*RVRPKA
Trigger: AGCTTTGGGACGCACCCTCCACAGTGGGAGGTGGTG...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCCCGGACAGTGGCCACTaGCCTGCAAACGCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: HCNFNSDFPARTAPASILPDSGH*PANAPG
Trigger: CCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGG...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGCACCCTTCCCTCTGCTaGTATAAACAGTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: VPSQPGQWPLACKRARALHPSLC*YKQSPI
Trigger: GATGGGGGACTGTTTATACCAGCAGAGGGAAGGGTG...CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCTTCCTGGCTGTTCCATaGGGCTCACTCCCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: TWCSTCLGAITARTVATGFLAVP*GSLPRH
Trigger: ATGGCGGGGGAGTGAGCCCCATGGAACAGCCAGGAA...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTCGCAGAGTCATAGCCTCTGCTaGTCCGCTGCTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QPQPSSCQKGDLAPPRSQSHSLC*SAASLQ
Trigger: CTGGAGAGAAGCAGCGGATCAGCAGAGGCTATGACT...CTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGGGTTCTTCAGAGCCTTaGTCACTTCCGAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGGSSEP*SLPRTH
Trigger: ATGAGTTCTCGGAAGTGATCAAGGCTCTGAAGAACC...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCAGTGACTGGATGTCCTTaGAGAGGTCCTGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPVTGCP*RGPAPR
Trigger: CCGAGGAGCAGGACCTCTTCAAGGACATCCAGTCAC...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp GAGCAGGACTGGGCAGGGTTGGTCACCTTGCCCCGGCTGCCTTGCCACTCTGTCGAAGCCACGGTCCCGTaGAGCAACCTCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: EQDWAGLVTLPRLPCHSVEATVP*SNLSSE
Trigger: TTCTGAGCTGAGGTTGCTTCACGGGACCGTGGCTTC...GACAGAGTGGCAAGGCAGCCGGGGCAAGGTGACCAACCCTGCCCAGTCCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp CACAGGTGTGAACAAGCCACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGGAGGGGGAGGCGGCCTaGACTGGCCCGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: HRCEQATATSTVTSRQGQEGEAA*TGPGHW
Trigger: CCAGTGGCCCGGGCCAGTTCAGGCCGCCTCCCCCTC...CTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp GTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGACACAACTGGGTCCCTaGAACCCTCAGGAACTTGTT +
Preference number: 4 (lower is better)
Translates to: VPSQPGQWPLACKRARALTQLGP*NPQELV
Trigger: AACAAGTTCCTGAGGGTTTCAGGGACCCAGTTGTGT...CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGTTCTGCGCGTACAGCTaGCGCAGCCCCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRFCAYS*RSPSAT
Trigger: GGTGGCTGAGGGGCTGCGGCAGCTGTACGCGCAGAA...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCCAGGGGAGATCTGGTaGTCGCGCTCAATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLPGEIW*SRSIFW
Trigger: CCAGAAGATTGAGCGCGAGCACCAGATCTCCCCTGG...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCGCCATCACTCATGTCTaGGCTTGGAGGGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCAITHV*AWRAAP
Trigger: TGGTGCCGCCCTCCAAGCGCAGACATGAGTGATGGC...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGGACATCCAAGTGAGCTaGCCTCCTTTGCTAAACAGA +
Preference number: 4 (lower is better)
Translates to: PASVTAERGCASEPVGRGDIQVS*PPLLNR
Trigger: TCTGTTTAGCAAAGGAGGGCAGCTCACTTGGATGTC...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGTTGCCCCGGCTGCCTTaGCACTCTGTCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRLPRLP*HSVPAG
Trigger: GCCAGCAGGGACAGAGTGGCAAGGCAGCCGGGGCAA...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCACCACCCCAAGTGAACTaGTCAGCTCCCACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPPPQVN*SAPTLL
Trigger: GAGCAAGGTGGGAGCTGAGCAGTTCACTTGGGGTGG...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTCCAGTGCCGAGGGCCTaGAGGTGCCCACTCATCCGT +
Preference number: 4 (lower is better)
Translates to: HWAARFWFLIAQPGGQGRPVPRA*RCPLIR
Trigger: ACGGATGAGTGGGCACCTGCAGGCCCTCGGCACTGG...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp CTCTGTCCCTGCTGGCATCACCCCCTCAGACACCAGGGGAGGATGGCCCAGGACACGGGGTTGGGCAGCTaGGCACACATGAACCTGTTG +
Preference number: 4 (lower is better)
Translates to: LCPCWHHPLRHQGRMAQDTGLGS*AHMNLL
Trigger: CAACAGGTTCATGTGTGCCCAGCTGCCCAACCCCGT...GTCCTGGGCCATCCTCCCCTGGTGTCTGAGGGGGTGATGCCAGCAGGGACAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp CCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTACGAACGGCCCGTTCATaGTGCCGTCAAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PGGQGRCKDIQVSCPPLLRTARS*CRQRRR
Trigger: GCGGCGCCTTTGACGGCACCATGAACGGGCCGTTCG...TAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GAGCAGGACTGGGCAGGGTTGGTCACCTTGCCCCGGCTGCCTTGCCACTCTGTCCAGGAAATGCAACACTaGGGTCCAGGAACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: EQDWAGLVTLPRLPCHSVQEMQH*GPGTGC
Trigger: GCACCCCGTTCCTGGACCCCAGTGTTGCATTTCCTG...GACAGAGTGGCAAGGCAGCCGGGGCAAGGTGACCAACCCTGCCCAGTCCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGTGGGCCGCAAGGTTCTaGTTTCTTATTGCTCAACCT +
Preference number: 4 (lower is better)
Translates to: TARTVATGLQTRPGPGGWWAARF*FLIAQP
Trigger: AGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCA...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCGGAAGCCCAGCTGTGTaGTACCTGGTGCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCGSPAV*YLVLHL
Trigger: CAGGTGGAGCACCAGGTACCACACAGCTGGGCTTCC...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGCCCCGCGGGAAAGCCTaGTGGGAAGCCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRPRGKA*WEAQLC
Trigger: ACACAGCTGGGCTTCCCACCAGGCTTTCCCGCGGGG...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTTCCTGGCTGTTCCATaGGGCTCACTCCCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCFLAVP*GSLPRH
Trigger: ATGGCGGGGGAGTGAGCCCCATGGAACAGCCAGGAA...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTCACACCCCCGCGGGATaGCTCCACGAGACACCCAGT +
Preference number: 4 (lower is better)
Translates to: HWAARFWFLIAQPGGQGRHTPAG*LHETPS
Trigger: ACTGGGTGTCTCGTGGAGCCATCCCGCGGGGGTGTG...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359393.6
CDS-3UTR TCA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACCGTTGCCAAACGCGTTaGGCTTGCGGAAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNRCQTR*ACGRGA
Trigger: GGCGCCCCTTCCGCAAGCTCAACGCGTTTGGCAACG...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CGCACGGGGAGCCTGGGCCCGGGAGGGGAAGGCACAAGAACCCACTTCGCCCGAGGTTCTTCAGAGCCTTaGTCACTTCCGAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: RTGSLGPGGEGTRTHFARGSSEP*SLPRTH
Trigger: ATGAGTTCTCGGAAGTGATCAAGGCTCTGAAGAACC...TCGGGCGAAGTGGGTTCTTGTGCCTTCCCCTCCCGGGCCCAGGCTCCCCGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGTGCTTCTGTGACTGCTaGGCGGGGTTGCGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRCFCDC*AGLRVG
Trigger: TCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCA...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTATGCTTCTGTGACTGCTaGGCGGGGTTGCGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: PGGQGRCKDIQVSCPPLLCFCDC*AGLRVG
Trigger: TCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCA...TAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCGGGCAGGAGCTGGGATaGCCACCCTTCCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: HCNFNSDFPARTAPASILGQELG*PPFLSQ
Trigger: CTGGCTGAGGAAGGGTGGTCATCCCAGCTCCTGCCC...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGCTGCAACTTCAACAGTaGCTTCCCGGCAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRLQLQQ*LPGKDS
Trigger: GCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAG...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCATGGGTCTCTCAGCCCTaGGTACAGCTGCAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPWVSQP*VQLQSK
Trigger: CTTAGACTGCAGCTGTACTCAGGGCTGAGAGACCCA...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp GGGCCGGCCAGCCCTGCAGCAACTGAAGCATCCACTGGCACCTCAAGTGCTGGTATCCCCGGGAAGTCCTaGTCGATCAGGTGTCGGATG +
Preference number: 4 (lower is better)
Translates to: GPASPAATEASTGTSSAGIPGKS*SIRCRM
Trigger: CATCCGACACCTGATCGAGCAGGACTTCCCGGGGAT...ACCAGCACTTGAGGTGCCAGTGGATGCTTCAGTTGCTGCAGGGCTGGCCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGCCTCTGCTGATCCGCTaGTTCTCTCCAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRPLLIR*FSPDRI
Trigger: GATCCTGTCTGGAGAGAAGCAGCGGATCAGCAGAGG...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGGCCGGCCAGCCCTGCAGCAACTGAAGCATCCACTGGCACCTCAAGTGCTGGTCCAGGGGAGATCTGGTaGTCGCGCTCAATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GPASPAATEASTGTSSAGPGEIW*SRSIFW
Trigger: CCAGAAGATTGAGCGCGAGCACCAGATCTCCCCTGG...ACCAGCACTTGAGGTGCCAGTGGATGCTTCAGTTGCTGCAGGGCTGGCCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp CACCTGGGCCTGACTGGCCCCACCCTTAGTTGCATGTTTGTCACAGGCTATCTGCGTGCAAATGGCAGGTaGGGGGCCGGGCGCCATCAC +
Preference number: 4 (lower is better)
Translates to: HLGLTGPTLSCMFVTGYLRANGR*GAGRHH
Trigger: GTGATGGCGCCCGGCCCCGCACCTGCCATTTGCACG...CAGATAGCCTGTGACAAACATGCAACTAAGGGTGGGGCCAGTCAGGCCCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp CAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTTGTAAGGACACCTCCCGGCCGGGCGTaGAAATGGCAGGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: QGSGFLLLNLGARGVVRTPPGRA*KWQVRG
Trigger: GCCCCGCACCTGCCATTTGCACGCCCGGCCGGGAGG...TGTCCTTACAACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CGCACGGGGAGCCTGGGCCCGGGAGGGGAAGGCACAAGAACCCACTTCGCCCGAGACATCCAAGTGAGCTaGCCTCCTTTGCTAAACAGA +
Preference number: 4 (lower is better)
Translates to: RTGSLGPGGEGTRTHFARDIQVS*PPLLNR
Trigger: TCTGTTTAGCAAAGGAGGGCAGCTCACTTGGATGTC...TCGGGCGAAGTGGGTTCTTGTGCCTTCCCCTCCCGGGCCCAGGCTCCCCGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTCCGCCCTTGACCACCTaGGAAGGCATCAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: HWAARFWFLIAQPGGQGRPPLTT*EGIRDS
Trigger: GGAGTCCCTGATGCCTTCCCAGGTGGTCAAGGGCGG...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAACTCATGTCTGCGCTTaGAGGGCGGCACCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: PGGQGRCKDIQVSCPPLLTHVCA*RAAPGA
Trigger: CGCACCTGGTGCCGCCCTCCAAGCGCAGACATGAGT...TAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCGCCAAAAGGGCGACCTaGCTCCCCCACGGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: HCNFNSDFPARTAPASILAKRAT*LPHGRS
Trigger: ACTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGC...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAACACCTAATGCCCCCTaGGCAGGGCTGCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PGGQGRCKDIQVSCPPLLTPNAP*AGLLLG
Trigger: GCCAAGGAGCAGCCCTGCCCAGGGGGCATTAGGTGT...TAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCCAGGAAATGCAACACTaGGGTCCAGGAACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCQEMQH*GPGTGC
Trigger: GCACCCCGTTCCTGGACCCCAGTGTTGCATTTCCTG...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CCAGCCCTGCAGCAACTGAAGCATCCACTGGCACCTCAAGTGCTGGTCATAGGAGGAGGCTGGGCTCAATaGCCCCAGGCAGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PALQQLKHPLAPQVLVIGGGWAQ*PQAEEG
Trigger: CCCCTCCTCTGCCTGGGGCCATTGAGCCCAGCCTCC...TCCTATGACCAGCACTTGAGGTGCCAGTGGATGCTTCAGTTGCTGCAGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
3UTR CAA 72 bp GCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATaGCTCAACCTGGGGGCCAGGGGCGTTGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: ARATGPQGSGFL*LNLGARGVVRT
Trigger: TGTCCTTACAACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGCCCGCTGTCTGGACATaGGAGCCTAGCCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRPAVWT*EPSQNH
Trigger: GTGGTTCTGGCTAGGCTCTCATGTCCAGACAGCGGG...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCTCTTCCCACAGGTGTaGACAAGCCACTGCAACTTC +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLLFPQV*TSHCNF
Trigger: GAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAG...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCAAAACCCTTGTTTACTTaGTGCCACCCAGTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPKPLFT*CHPVPR
Trigger: CCTCGGCACTGGGTGGCATCAAGTAAACAAGGGTTT...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGGGAGTTCCTGCATCTTaGGGAGGCTCGGGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRGVPAS*GGSGSP
Trigger: GGGACTTCCCGAGCCTCCGCAAGATGCAGGAACTCC...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCACTGAAGTCCTGGGTCTaGAGGAGTTCCTGCATCTTG +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPLKSWV*RSSCIL
Trigger: CAAGATGCAGGAACTCCTGCAGACCCAGGACTTCAG...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CACAGGTGTGAACAAGCCACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGACTGCTGAGCGGGGTTaGGCGTCGGAGCCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HRCEQATATSTVTSRQGQTAERG*ASEPVG
Trigger: CCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGT...CTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCAGTTCTGGTTTCTTATTaGTCAACCTGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPVLVSY*STWGPG
Trigger: CCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAAC...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGGTTCTGGTTTCTTATTaGTCAACCTGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLVLVSY*STWGPG
Trigger: CCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAAC...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GCAGTCCTCAGTCTCGGACTCTCCCTCTGTGAAATGGGGGAACATGAACTTCCTCAGTGGCCACTGGCCTaGAAACGCGCCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: AVLSLGLSLCEMGEHELPQWPLA*KRARAL
Trigger: CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTG...AGGAAGTTCATGTTCCCCCATTTCACAGAGGGAGAGTCCGAGACTGAGGACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTCTCCACCTGCCTTGGTaGCATCACAGCCCGGACAGT +
Preference number: 4 (lower is better)
Translates to: HWAARFWFLIAQPGGQGRLHLPW*HHSPDS
Trigger: ACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAG...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GAAGCATCCACTGGCACCTCAAGTGCTGGTCATAGGACCAGACACCACCACACCCTTGATGCCACCCAGTaGCGAGGGCCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: EASTGTSSAGHRTRHHHTLDATQ*RGPAGA
Trigger: GGCACCTGCAGGCCCTCGGCACTGGGTGGCATCAAG...GGTGTGGTGGTGTCTGGTCCTATGACCAGCACTTGAGGTGCCAGTGGATGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGAACTTGCTGAAGTCCTaGGTCTGCAGGAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLNLLKS*VCRSSC
Trigger: GCAGGAACTCCTGCAGACCCAGGACTTCAGCAAGTT...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTCACACGGAGGGTGCCTaGTGTTCCTGTCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: HWAARFWFLIAQPGGQGRHTEGA*CSCPCS
Trigger: GCTGCATGGACAGGAACACCAGGCACCCTCCGTGTG...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCATCCTTGGCTGGAGGGTaGGAAGGGGAGACAAAAATC +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPSLAGG*EGETKI
Trigger: GATTTTTGTCTCCCCTTCCCACCCTCCAGCCAAGGA...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACACTGGCCCGGGCCACTaGGCCGCAAGGTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNTGPGH*AARFWF
Trigger: AAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGT...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACTGGCCCGGGCCACTaGGCCGCAAGGTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: HCNFNSDFPARTAPASILTGPGH*AARFWF
Trigger: AAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGT...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCCACTCATCCGTCTGTaGCTGAGGGGTGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLPLIRL*LRGASL
Trigger: TAGGCTGGCACCCCTCAGCCACAGACGGATGAGTGG...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCAAAGCTCCAGTTAAGTaGGAGGGTAGGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCKAPVK*EGRAGA
Trigger: AGCTCCTGCCCTACCCTCTCACTTAACTGGAGCTTT...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GCAGTCCTCAGTCTCGGACTCTCCCTCTGTGAAATGGGGGAACATGAACTTCCTTGGGCTCGGGCCCGATaGGCATCCCCGGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: AVLSLGLSLCEMGEHELPWARAR*ASPGSP
Trigger: AGGACTTCCCGGGGATGCGCATCGGGCCCGAGCCCA...AGGAAGTTCATGTTCCCCCATTTCACAGAGGGAGAGTCCGAGACTGAGGACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGCCAGGGGAGATCTGGTaGTCGCGCTCAATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRPGEIW*SRSIFW
Trigger: CCAGAAGATTGAGCGCGAGCACCAGATCTCCCCTGG...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGATCAGGGACTCCTCCTaGCGCACCATCACCATCAGC +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRIRDSS*RTITIS
Trigger: GCTGATGGTGATGGTGCGGCAGGAGGAGTCCCTGAT...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTATCAGGGACTCCTCCTaGCGCACCATCACCATCAGC +
Preference number: 4 (lower is better)
Translates to: HWAARFWFLIAQPGGQGRIRDSS*RTITIS
Trigger: GCTGATGGTGATGGTGCGGCAGGAGGAGTCCCTGAT...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCTTGTCACAGGCTATCTaGTTTGTCTTCAGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: TWCSTCLGAITARTVATGLSQAI*FVFRGP
Trigger: CGGGCCTCTGAAGACAAAGCAGATAGCCTGTGACAA...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTTGGACGGCCTGGTTTaGATCTGCTTCTACCACCTT +
Preference number: 4 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRLDGLV*ICFYHL
Trigger: AAGGTGGTAGAAGCAGATGCAAACCAGGCCGTCCAA...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCAACTTGCTGAAGTCCTaGGTCTGCAGGAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCNLLKS*VCRSSC
Trigger: GCAGGAACTCCTGCAGACCCAGGACTTCAGCAAGTT...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACCACCACCTCCCACTGTaGAGGGTGCGTCCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNHHLPL*RVRPKA
Trigger: AGCTTTGGGACGCACCCTCCACAGTGGGAGGTGGTG...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
3UTR CAA 72 bp CTTCAGAGGCCCGGCTTCCCTGTACTTAAACCGTCCTaGGGGCTAGCAAGGAGCCAGTCTGGCTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LQRPGFPVLKPS*GLARSQSGSKA
Trigger: GGCTTTGGAGCCAGACTGGCTCCTTGCTAGCCCCAAGGACGGTTTAAGTACAGGGAAGCCGGGCCTCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTAGTCATAGCCTCTGCTaGTCCGCTGCTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HWAARFWFLIAQPGGQGRSHSLC*SAASLQ
Trigger: CTGGAGAGAAGCAGCGGATCAGCAGAGGCTATGACT...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACGAAGCCACGGTCCCGTaGAGCAACCTCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNEATVP*SNLSSE
Trigger: TTCTGAGCTGAGGTTGCTTCACGGGACCGTGGCTTC...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp GTACTTAAACCGTCCTTGGGGCTAGCAAGGAGCCAGTCTGGCTCCAAAGCCCAGCCCGCTGTCTGGACATaGGAGCCTAGCCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: VLKPSLGLARSQSGSKAQPAVWT*EPSQNH
Trigger: GTGGTTCTGGCTAGGCTCTCATGTCCAGACAGCGGG...CTGGGCTTTGGAGCCAGACTGGCTCCTTGCTAGCCCCAAGGACGGTTTAAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTGCAACTTCAACAGTaGCTTCCCGGCAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLLQLQQ*LPGKDS
Trigger: GCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAG...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTCCCTCAGTGGGGCCGTaGATGACGGCGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSPSVGP*MTAMKE
Trigger: CTCCTTCATCGCCGTCATGCACGGCCCCACTGAGGG...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp AGAGGCGAGGAAACATCCGCTCAGTCTTTATGGACCTTGAGAAATGGTGAGGCTCCACCACGAGCGCGTTaGCCGGCACCACGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGEETSAQSLWTLRNGEAPPRAR*PAPRPQ
Trigger: CTGAGGGCGTGGTGCCGGGCAACGCGCTCGTGGTGG...AGCCTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGATGTTTCCTCGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CACCTGGGCCTGACTGGCCCCACCCTTAGTTGCATGTTTGTCACAGGCTATCTGGGAGTTCCTGCATCTTaGGGAGGCTCGGGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: HLGLTGPTLSCMFVTGYLGVPAS*GGSGSP
Trigger: GGGACTTCCCGAGCCTCCGCAAGATGCAGGAACTCC...CAGATAGCCTGTGACAAACATGCAACTAAGGGTGGGGCCAGTCAGGCCCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCATCAGGGACTCCTCCTaGCGCACCATCACCATCAGC +
Preference number: 4 (lower is better)
Translates to: HCNFNSDFPARTAPASILIRDSS*RTITIS
Trigger: GCTGATGGTGATGGTGCGGCAGGAGGAGTCCCTGAT...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGTCCCACTGTGGAGGGTaGGTCCCAAAGCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLSHCGG*VPKLQL
Trigger: TAACTGGAGCTTTGGGACGCACCCTCCACAGTGGGA...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCTTGCCACTCTGTCCCTaGTGGCATCACCCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: HCNFNSDFPARTAPASILLPLCP*WHHPLR
Trigger: TCTGAGGGGGTGATGCCAGCAGGGACAGAGTGGCAA...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp GCAGTCCTCAGTCTCGGACTCTCCCTCTGTGAAATGGGGGAACATGAACTTCCTCCGAGGGCCTGCAGGTaGCCACTCATCCGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AVLSLGLSLCEMGEHELPPRACR*PLIRLW
Trigger: CCACAGACGGATGAGTGGGCACCTGCAGGCCCTCGG...AGGAAGTTCATGTTCCCCCATTTCACAGAGGGAGAGTCCGAGACTGAGGACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACTCCCCAGGGGAGATCTaGTGCTCGCGCTCAATCTTC +
Preference number: 4 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNSPGEI*CSRSIF
Trigger: GAAGATTGAGCGCGAGCACCAGATCTCCCCTGGGGA...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTCCGCCCTTGACCACCTaGGAAGGCATCAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSPPLTT*EGIRDS
Trigger: GGAGTCCCTGATGCCTTCCCAGGTGGTCAAGGGCGG...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTTGTAAGGACAGCCAAAAGGGCGACCTaGCTCCCCCACGGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: QGSGFLLLNLGARGVVRTAKRAT*LPHGRS
Trigger: ACTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGC...TGTCCTTACAACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGTGGTTGGGAAGTTATTaGGAACTTTGGTCAAGTATG +
Preference number: 4 (lower is better)
Translates to: VPSQPGQWPLACKRARALWLGSY*ELWSSM
Trigger: CATACTTGACCAAAGTTCCCAATAACTTCCCAACCA...CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGTGGGCCGCAAGGTTCTaGTTTCTTATTGCTCAACCT +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLWAARF*FLIAQP
Trigger: AGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCA...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTCGCAGTCACCTAATACTGTATaGAGTGACGGGCTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: QPQPSSCQKGDLAPPRSQSPNTV*SDGLRR
Trigger: TCTCCTTAGCCCGTCACTCCATACAGTATTAGGTGA...CTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCATCTTTTATCAGTTCCTaGCTGTTCCATGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPSFISS*LFHGAH
Trigger: GTGAGCCCCATGGAACAGCCAGGAACTGATAAAAGA...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359393.6
CDS-3UTR TCA 90 bp GGCGGCCTGAACTGGCCCGGGCCACTGGGCCGCAAGGTTCTGGTTTCTTATTGCAGTCTTTATGGACCTTaGGAAATGGTGAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GGLNWPGPLGRKVLVSYCSLYGP*EMVRLP
Trigger: GGGAAGCCTCACCATTTCTCAAGGTCCATAAAGACT...GCAATAAGAAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGTTCAGGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGGCACCCTGGTTCCCTaGCTACGCGCCGCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATGTLVP*LRAAPA
Trigger: GGCGGGCGCGGCGCGTAGTCAGGGAACCAGGGTGCC...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359393.6
CDS-3UTR GCA 90 bp CAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTTGTAAGGACACCCTCAGTGGGGCCGTaGATGACGGCGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QGSGFLLLNLGARGVVRTPSVGP*MTAMKE
Trigger: CTCCTTCATCGCCGTCATGCACGGCCCCACTGAGGG...TGTCCTTACAACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTCCACCACGAGCGCGTTaGCCGGCACCACGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QGESLHFSSHRCEQATATPPRAR*PAPRPQ
Trigger: CTGAGGGCGTGGTGCCGGGCAACGCGCTCGTGGTGG...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCCCACTCCAGGACGGCTaGAAAGTCATAGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HCNFNSDFPARTAPASILPLQDG*KVIASA
Trigger: AGCAGAGGCTATGACTTTGCAGCCGTCCTGGAGTGG...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CTGCTGCCCCTGGAAAAGACAAGGAAGCACCCGAAGCTTTCGCACAGTTCAGACGCCATCACTCATGTCTaGGCTTGGAGGGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: LLPLEKTRKHPKLSHSSDAITHV*AWRAAP
Trigger: TGGTGCCGCCCTCCAAGCGCAGACATGAGTGATGGC...GTCTGAACTGTGCGAAAGCTTCGGGTGCTTCCTTGTCTTTTCCAGGGGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp GTACTTAAACCGTCCTTGGGGCTAGCAAGGAGCCAGTCTGGCTCCAAAGCCCAGGAAGCACACGGAGGGTaGCTGGTGTTCCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: VLKPSLGLARSQSGSKAQEAHGG*LVFLSM
Trigger: CATGGACAGGAACACCAGGCACCCTCCGTGTGCTTC...CTGGGCTTTGGAGCCAGACTGGCTCCTTGCTAGCCCCAAGGACGGTTTAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTGGACACGGGGCTGGCTaGAGTTCCTGGCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSGHGAG*SSWLFH
Trigger: ATGGAACAGCCAGGAACTGCAGCCAGCCCCGTGTCC...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621096.4
CDS-3UTR CCA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACTCCCTAGCACGGTGTTaGGGAGCTTGGACTTCACCA +
Preference number: 4 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNSLARC*GAWTSP
Trigger: TGGTGAAGTCCAAGCTCCCCAACACCGTGCTAGGGA...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCTCCGCTCAGTCTTTATaGACCTTGAGAAATGGTGAG +
Preference number: 4 (lower is better)
Translates to: TWCSTCLGAITARTVATGSAQSL*TLRNGE
Trigger: CTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGA...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGTCCGCTCAGTCTTTATaGACCTTGAGAAATGGTGAG +
Preference number: 4 (lower is better)
Translates to: WCSTCLGAITARTVATGLSAQSL*TLRNGE
Trigger: CTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGA...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTATCCTTGGCTGGAGGGTaGGAAGGGGAGACAAAAATC +
Preference number: 4 (lower is better)
Translates to: PGGQGRCKDIQVSCPPLLSLAGG*EGETKI
Trigger: GATTTTTGTCTCCCCTTCCCACCCTCCAGCCAAGGA...TAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTCCAGCAGAGCAGGACTaGGCAGGGTTGGTCACCTTG +
Preference number: 4 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSPAEQD*AGLVTL
Trigger: CAAGGTGACCAACCCTGCCCAGTCCTGCTCTGCTGG...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACACACAGACCCCTTTaGCTGTCCAGGCTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: HCNFNSDFPARTAPASILTHRPL*LSRLVR
Trigger: TCTCACCAGCCTGGACAGCCAAAGGGGTCTGTGTGT...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621096.4
CDS-3UTR TCA 90 bp CAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTTGTAAGGACACGATCAGGTGTCGGATaGAGGTGGTCTTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: QGSGFLLLNLGARGVVRTRSGVG*RWSCPC
Trigger: GCACGGGCAAGACCACCTTCATCCGACACCTGATCG...TGTCCTTACAACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CACCTGGGCCTGACTGGCCCCACCCTTAGTTGCATGTTTGTCACAGGCTATCTGAGTCATAGCCTCTGCTaGTCCGCTGCTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HLGLTGPTLSCMFVTGYLSHSLC*SAASLQ
Trigger: CTGGAGAGAAGCAGCGGATCAGCAGAGGCTATGACT...CAGATAGCCTGTGACAAACATGCAACTAAGGGTGGGGCCAGTCAGGCCCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp AAAGAAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTCCACCACGAGCGCGTTaGCCGGCACCACGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KERWWFSFSRGEETSAQSPPRAR*PAPRPQ
Trigger: CTGAGGGCGTGGTGCCGGGCAACGCGCTCGTGGTGG...AGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GTACTTAAACCGTCCTTGGGGCTAGCAAGGAGCCAGTCTGGCTCCAAAGCCCAGATGGCCCAGGACTGCTaGCCCTGGAAAAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: VLKPSLGLARSQSGSKAQMAQDC*PWKRQG
Trigger: TCCTTGTCTTTTCCAGGGGCAGCAGTCCTGGGCCAT...CTGGGCTTTGGAGCCAGACTGGCTCCTTGCTAGCCCCAAGGACGGTTTAAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp GTACTTAAACCGTCCTTGGGGCTAGCAAGGAGCCAGTCTGGCTCCAAAGCCCAGAGCCCTGAGTACAGCTaGAGTCTAAGGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: VLKPSLGLARSQSGSKAQSPEYS*SLRVGL
Trigger: CAACCCCACCCTTAGACTGCAGCTGTACTCAGGGCT...CTGGGCTTTGGAGCCAGACTGGCTCCTTGCTAGCCCCAAGGACGGTTTAAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp AAAGAAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTAACGCGCCCGGGCCCTaGAGGCTGGGCTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: KERWWFSFSRGEETSAQSNAPGP*RLGSMA
Trigger: GGCCATTGAGCCCAGCCTCCAGGGCCCGGGCGCGTT...AGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTCAGCTGTGTGGTACCTaGTGCTCCACCTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSQLCGT*CSTCLG
Trigger: ACCAAGGCAGGTGGAGCACCAGGTACCACACAGCTG...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp CACAGGTGTGAACAAGCCACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCCACTCTGTCCCTGCTaGCATCACCCCCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: HRCEQATATSTVTSRQGQPLCPC*HHPLRH
Trigger: GTGTCTGAGGGGGTGATGCCAGCAGGGACAGAGTGG...CTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGAGTCTTTATGGACCTTaGGAAATGGTGAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLSLYGP*EMVRLP
Trigger: GGGAAGCCTCACCATTTCTCAAGGTCCATAAAGACT...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CACTGGGCCGCAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTAGTCTTTATGGACCTTaGGAAATGGTGAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: HWAARFWFLIAQPGGQGRSLYGP*EMVRLP
Trigger: GGGAAGCCTCACCATTTCTCAAGGTCCATAAAGACT...ACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTGCGGCCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp GTACTTAAACCGTCCTTGGGGCTAGCAAGGAGCCAGTCTGGCTCCAAAGCCCAGAAAGCTCCAGTTAAGTaGGAGGGTAGGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VLKPSLGLARSQSGSKAQKAPVK*EGRAGA
Trigger: AGCTCCTGCCCTACCCTCTCACTTAACTGGAGCTTT...CTGGGCTTTGGAGCCAGACTGGCTCCTTGCTAGCCCCAAGGACGGTTTAAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp GCAGTCCTCAGTCTCGGACTCTCCCTCTGTGAAATGGGGGAACATGAACTTCCTACAGTCCCCCATCTGTaGCATCACCTGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: AVLSLGLSLCEMGEHELPTVPHL*HHLGLT
Trigger: AGTCAGGCCCAGGTGATGTCACAGATGGGGGACTGT...AGGAAGTTCATGTTCCCCCATTTCACAGAGGGAGAGTCCGAGACTGAGGACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp AGAGGCGAGGAAACATCCGCTCAGTCTTTATGGACCTTGAGAAATGGTGAGGCTAGGGGTAGCAGCTTCTaGGCGTACAGCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RGEETSAQSLWTLRNGEARGSSF*AYSCRS
Trigger: GCTGCGGCAGCTGTACGCGCAGAAGCTGCTACCCCT...AGCCTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGATGTTTCCTCGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGTGGGCTCGGGCCCGATaGGCATCCCCGGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQWARAR*ASPGSP
Trigger: AGGACTTCCCGGGGATGCGCATCGGGCCCGAGCCCA...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CCAGCCCTGCAGCAACTGAAGCATCCACTGGCACCTCAAGTGCTGGTCATAGGACTGAAGTCCTGGGTCTaGAGGAGTTCCTGCATCTTG +
Preference number: 4 (lower is better)
Translates to: PALQQLKHPLAPQVLVIGLKSWV*RSSCIL
Trigger: CAAGATGCAGGAACTCCTGCAGACCCAGGACTTCAG...TCCTATGACCAGCACTTGAGGTGCCAGTGGATGCTTCAGTTGCTGCAGGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTTGGTGTTCCTGTCCATaGAGCCTCAGCCTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSWCSCP*SLSLAA
Trigger: AGCTGCTAGGCTGAGGCTGCATGGACAGGAACACCA...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACGGCCCCACCCTTAGTTaGATGTTTGTCACAGGCTAT +
Preference number: 4 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNGPTLS*MFVTGY
Trigger: ATAGCCTGTGACAAACATGCAACTAAGGGTGGGGCC...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp TCTGCACCCTTTTATGAAGGGTCACTAATCAGTCACCCTTCCCTCTGCTGGTATCGAACGGCCCGTTCATaGTGCCGTCAAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SAPFYEGSLISHPSLCWYRTARS*CRQRRR
Trigger: GCGGCGCCTTTGACGGCACCATGAACGGGCCGTTCG...ATACCAGCAGAGGGAAGGGTGACTGATTAGTGACCCTTCATAAAAGGGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTAGGACTGGGCAGGGTTaGTCACCTTGCCCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QGESLHFSSHRCEQATATRTGQG*SPCPGC
Trigger: GCAGCCGGGGCAAGGTGACCAACCCTGCCCAGTCCT...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCGGTTCTTCAGAGCCTTaGTCACTTCCGAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: HCNFNSDFPARTAPASILGSSEP*SLPRTH
Trigger: ATGAGTTCTCGGAAGTGATCAAGGCTCTGAAGAACC...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTTGTAAGGACACCACTCCAGGACGGCTaGAAAGTCATAGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QGSGFLLLNLGARGVVRTPLQDG*KVIASA
Trigger: AGCAGAGGCTATGACTTTGCAGCCGTCCTGGAGTGG...TGTCCTTACAACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp AGAGGCGAGGAAACATCCGCTCAGTCTTTATGGACCTTGAGAAATGGTGAGGCTACCTGGTGCTCCACCTaGCTTGGTGCCATCACAGCC +
Preference number: 4 (lower is better)
Translates to: RGEETSAQSLWTLRNGEATWCST*LGAITA
Trigger: GGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT...AGCCTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGATGTTTCCTCGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp AGAGGCGAGGAAACATCCGCTCAGTCTTTATGGACCTTGAGAAATGGTGAGGCTCTGTGTGGTACCTGGTaGTCCACCTGCCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RGEETSAQSLWTLRNGEALCGTW*STCLGA
Trigger: GGCACCAAGGCAGGTGGAGCACCAGGTACCACACAG...AGCCTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGATGTTTCCTCGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGCTTTTGAACAGTGGTTaGGAAGTTATTGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRLLNSG*EVIGNF
Trigger: AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAG...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp AGAGGCGAGGAAACATCCGCTCAGTCTTTATGGACCTTGAGAAATGGTGAGGCTGTGAATGCCCACAGGTaGCAGCTGAGTGACGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGEETSAQSLWTLRNGEAVNAHR*QLSDAG
Trigger: CCCTGCGTCACTCAGCTGCCACCTGTGGGCATTCAC...AGCCTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGATGTTTCCTCGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGGGCAGGAGCTGGGATaGCCACCCTTCCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATGQELG*PPFLSQ
Trigger: CTGGCTGAGGAAGGGTGGTCATCCCAGCTCCTGCCC...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTCCACCTGGCACAGGGTaGATGCCCACAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATPPGTG*MPTGGS
Trigger: GCTGCCACCTGTGGGCATTCACCCTGTGCCAGGTGG...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp AAAGAAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTCCCTCAGTGGGGCCGTaGATGACGGCGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: KERWWFSFSRGEETSAQSPSVGP*MTAMKE
Trigger: CTCCTTCATCGCCGTCATGCACGGCCCCACTGAGGG...AGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CACAGGTGTGAACAAGCCACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCTGAAGTCCTGGGTCTaGAGGAGTTCCTGCATCTTG +
Preference number: 4 (lower is better)
Translates to: HRCEQATATSTVTSRQGQLKSWV*RSSCIL
Trigger: CAAGATGCAGGAACTCCTGCAGACCCAGGACTTCAG...CTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp AAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTTTATACGGCCCGTTCATGGTaGCGTCAAAGGCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: KDGGFPFREARKHPLSLYTARSW*RQRRRP
Trigger: AGGGCGGCGCCTTTGACGGCACCATGAACGGGCCGT...ATAAAGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTCCTCAGCCTAGCAGCTaGCAAAAGGGCGACCTGGCT +
Preference number: 4 (lower is better)
Translates to: QGESLHFSSHRCEQATATPQPSS*QKGDLA
Trigger: AGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGG...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTTGTAAGGACAGTTCTGGTTTCTTATTaGTCAACCTGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QGSGFLLLNLGARGVVRTVLVSY*STWGPG
Trigger: CCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAAC...TGTCCTTACAACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTCAGTGGCCACTGGCCTaGAAACGCGCCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFQWPLA*KRARAL
Trigger: CAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTG...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp TCTGCACCCTTTTATGAAGGGTCACTAATCAGTCACCCTTCCCTCTGCTGGTATACCTGGTGCTCCACCTaGCTTGGTGCCATCACAGCC +
Preference number: 4 (lower is better)
Translates to: SAPFYEGSLISHPSLCWYTWCST*LGAITA
Trigger: GGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT...ATACCAGCAGAGGGAAGGGTGACTGATTAGTGACCCTTCATAAAAGGGTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp AAAGAAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTCCCTCAGCCACCGTCTaGAAGAGCTCCGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KERWWFSFSRGEETSAQSPSATV*KSSGSF
Trigger: GAAGGAGCCGGAGCTCTTCCAGACGGTGGCTGAGGG...AGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp AGAGGCGAGGAAACATCCGCTCAGTCTTTATGGACCTTGAGAAATGGTGAGGCTTCCCCAGGGGAGATCTaGTGCTCGCGCTCAATCTTC +
Preference number: 4 (lower is better)
Translates to: RGEETSAQSLWTLRNGEASPGEI*CSRSIF
Trigger: GAAGATTGAGCGCGAGCACCAGATCTCCCCTGGGGA...AGCCTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGATGTTTCCTCGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp AAAGAAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTGCCGCGCGATGTCGTTaGCCAGCATGTCATCCACCG +
Preference number: 4 (lower is better)
Translates to: KERWWFSFSRGEETSAQSAARCR*PACHPP
Trigger: CGGTGGATGACATGCTGGCCAACGACATCGCGCGGC...AGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGACTCATGTCTGCGCTTaGAGGGCGGCACCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQTHVCA*RAAPGA
Trigger: CGCACCTGGTGCCGCCCTCCAAGCGCAGACATGAGT...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGACTGGCCCGGGCCACTaGGCCGCAAGGTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQTGPGH*AARFWF
Trigger: AAACCAGAACCTTGCGGCCCAGTGGCCCGGGCCAGT...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGCGCGGGAAAGCCTGGTaGGAAGCCCAGCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQRGKAW*EAQLCG
Trigger: ACCACACAGCTGGGCTTCCCACCAGGCTTTCCCGCG...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp AGAGGCGAGGAAACATCCGCTCAGTCTTTATGGACCTTGAGAAATGGTGAGGCTCTCGGAGCACACAACTaGGTCCCTGAAACCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RGEETSAQSLWTLRNGEALGAHN*VPETLR
Trigger: CCTGAGGGTTTCAGGGACCCAGTTGTGTGCTCCGAG...AGCCTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGATGTTTCCTCGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp AAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTTTATGTGCGGTCCTCCAGCTaGCTCGGAATCCCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: KDGGFPFREARKHPLSLYVRSSS*LGIPGS
Trigger: GCTTCCGGGGATTCCGAGCCAGCTGGAGGACCGCAC...ATAAAGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359393.6
CDS-3UTR CCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTCCCAGTCAGGCACCCTaGTTCCCTGACTACGCGCCG +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATPSQAP*FPDYAP
Trigger: CGGCGCGTAGTCAGGGAACCAGGGTGCCTGACTGGG...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359393.6
3UTR CAA 72 bp CCTGATGGAAAGCACGCTGGAGTTGGACGGCCTGGTTaGCATCTGCTTCTACCACCTTTGTTATTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: PDGKHAGVGRPG*HLLLPPLLFRQ
Trigger: CTGCCGAAATAACAAAGGTGGTAGAAGCAGATGCAAACCAGGCCGTCCAACTCCAGCGTGCTTTCCATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCCGCGCGATGTCGTTaGCCAGCATGTCATCCACCG +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATAARCR*PACHPP
Trigger: CGGTGGATGACATGCTGGCCAACGACATCGCGCGGC...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTGGAGGCTGGGCTCAATaGCCCCAGGCAGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFGGWAQ*PQAEEG
Trigger: CCCCTCCTCTGCCTGGGGCCATTGAGCCCAGCCTCC...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp AAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTTTATCAGCGCAGCTCCACCTaGCACAGGGTGAATGCCCAC +
Preference number: 4 (lower is better)
Translates to: KDGGFPFREARKHPLSLYQRSST*HRVNAH
Trigger: GTGGGCATTCACCCTGTGCCAGGTGGAGCTGCGCTG...ATAAAGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTCGATCAGGTGTCGGATaGAGGTGGTCTTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATRSGVG*RWSCPC
Trigger: GCACGGGCAAGACCACCTTCATCCGACACCTGATCG...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp AAAGAAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTATCCCCGGGAAGTCCTaGTCGATCAGGTGTCGGATG +
Preference number: 4 (lower is better)
Translates to: KERWWFSFSRGEETSAQSIPGKS*SIRCRM
Trigger: CATCCGACACCTGATCGAGCAGGACTTCCCGGGGAT...AGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGATCCCCGGGAAGTCCTaGTCGATCAGGTGTCGGATG +
Preference number: 4 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQIPGKS*SIRCRM
Trigger: CATCCGACACCTGATCGAGCAGGACTTCCCGGGGAT...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTCCTCTGCTGATCCGCTaGTTCTCTCCAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: QGESLHFSSHRCEQATATPLLIR*FSPDRI
Trigger: GATCCTGTCTGGAGAGAAGCAGCGGATCAGCAGAGG...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGCCAGCTCTTTCTTTTTaGTCTCTTTACCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRPALSF*SLYQRH
Trigger: ATGTCTTTGGTAAAGAGAGCAAAAAGAAAGAGCTGG...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTGGTGTTCCTGTCCATaGAGCCTCAGCCTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QGESLHFSSHRCEQATATWCSCP*SLSLAA
Trigger: AGCTGCTAGGCTGAGGCTGCATGGACAGGAACACCA...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTCTCCACCTGCCTTGGTaGCATCACAGCCCGGACAGT +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATLHLPW*HHSPDS
Trigger: ACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAG...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp AAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTTTATGCTCAGCTCCCACCTTaGTCAGGGAAGGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: KDGGFPFREARKHPLSLYAQLPP*SGKGAS
Trigger: TGATGCCCCCTTCCCTGAGCAAGGTGGGAGCTGAGC...ATAAAGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp AAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTTTATCACACGGAGGGTGCCTaGTGTTCCTGTCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: KDGGFPFREARKHPLSLYHTEGA*CSCPCS
Trigger: GCTGCATGGACAGGAACACCAGGCACCCTCCGTGTG...ATAAAGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTTTCTGCCAGAGGGGCTaGAGCAGCCTCTACCCATGG +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATFCQRG*SSLYPW
Trigger: CCATGGGTAGAGGCTGCTCCAGCCCCTCTGGCAGAA...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp AAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTTTATGTGACTGGATGTCCTTaGAGAGGTCCTGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: KDGGFPFREARKHPLSLYVTGCP*RGPAPR
Trigger: CCGAGGAGCAGGACCTCTTCAAGGACATCCAGTCAC...ATAAAGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTTGTAAGGACAGTCTGCACCCTTTTATaGAGGGTCACTAATCAGTCA +
Preference number: 4 (lower is better)
Translates to: QGSGFLLLNLGARGVVRTVCTLL*RVTNQS
Trigger: TGACTGATTAGTGACCCTTCATAAAAGGGTGCAGAC...TGTCCTTACAACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTAACTTCCTCAGATCGTaGCAGCGCAGCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATNFLRS*QRSSTW
Trigger: CCAGGTGGAGCTGCGCTGTCACGATCTGAGGAAGTT...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR GCA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACCCAGCTCTTTCTTTTTaGTCTCTTTACCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNPALSF*SLYQRH
Trigger: ATGTCTTTGGTAAAGAGAGCAAAAAGAAAGAGCTGG...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTTCCCCAGGGGAGATCTaGTGCTCGCGCTCAATCTTC +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATSPGEI*CSRSIF
Trigger: GAAGATTGAGCGCGAGCACCAGATCTCCCCTGGGGA...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp AAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTTTATAGCAGCCTCTACCCATaGCACCTCAAGTCTGCACCC +
Preference number: 4 (lower is better)
Translates to: KDGGFPFREARKHPLSLYSSLYP*HLKSAP
Trigger: GGGTGCAGACTTGAGGTGCCATGGGTAGAGGCTGCT...ATAAAGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp AAAGAAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTCTCTTCCCACAGGTGTaGACAAGCCACTGCAACTTC +
Preference number: 4 (lower is better)
Translates to: KERWWFSFSRGEETSAQSLFPQV*TSHCNF
Trigger: GAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAG...AGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGGCTGTCCAGGCTGGTaGGAATCTTCAGTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATGCPGW*ESSVGD
Trigger: ATCACCCACTGAAGATTCTCACCAGCCTGGACAGCC...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621096.4
CDS-3UTR GCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTCCTCTGCTGATCCGCTaGTTCTCTCCAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATPLLIR*FSPDRI
Trigger: GATCCTGTCTGGAGAGAAGCAGCGGATCAGCAGAGG...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp AAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTTTATTCCCACTGTGGAGGGTaGGTCCCAAAGCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: KDGGFPFREARKHPLSLYSHCGG*VPKLQL
Trigger: TAACTGGAGCTTTGGGACGCACCCTCCACAGTGGGA...ATAAAGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTCTGTGTGGTACCTGGTaGTCCACCTGCCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFLCGTW*STCLGA
Trigger: GGCACCAAGGCAGGTGGAGCACCAGGTACCACACAG...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTTGGTTGGGAAGTTATTaGGAACTTTGGTCAAGTATG +
Preference number: 4 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSWLGSY*ELWSSM
Trigger: CATACTTGACCAAAGTTCCCAATAACTTCCCAACCA...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGTCCTTGGCTGGAGGGTaGGAAGGGGAGACAAAAATC +
Preference number: 4 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQSLAGG*EGETKI
Trigger: GATTTTTGTCTCCCCTTCCCACCCTCCAGCCAAGGA...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTGGAAGCCCAGCTGTGTaGTACCTGGTGCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFGSPAV*YLVLHL
Trigger: CAGGTGGAGCACCAGGTACCACACAGCTGGGCTTCC...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTAAAAATCACAGCTTTTaGACAGTGGTTGGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSKNHSF*TVVGKL
Trigger: TAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTT...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp CACAGGTGTGAACAAGCCACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGAAAAATCACAGCTTTTaGACAGTGGTTGGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: HRCEQATATSTVTSRQGQKNHSF*TVVGKL
Trigger: TAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTT...CTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTCCACTCCAGGACGGCTaGAAAGTCATAGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFPLQDG*KVIASA
Trigger: AGCAGAGGCTATGACTTTGCAGCCGTCCTGGAGTGG...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTTCCCACTGTGGAGGGTaGGTCCCAAAGCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFSHCGG*VPKLQL
Trigger: TAACTGGAGCTTTGGGACGCACCCTCCACAGTGGGA...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CCA 90 bp TCTGCACCCTTTTATGAAGGGTCACTAATCAGTCACCCTTCCCTCTGCTGGTATTCCGCTCAGTCTTTATaGACCTTGAGAAATGGTGAG +
Preference number: 4 (lower is better)
Translates to: SAPFYEGSLISHPSLCWYSAQSL*TLRNGE
Trigger: CTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGA...ATACCAGCAGAGGGAAGGGTGACTGATTAGTGACCCTTCATAAAAGGGTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR TCA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTAAAGCTCCAGTTAAGTaGGAGGGTAGGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFKAPVK*EGRAGA
Trigger: AGCTCCTGCCCTACCCTCTCACTTAACTGGAGCTTT...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGACATCCAAGTGAGCTaGCCTCCTTTGCTAAACAGA +
Preference number: 4 (lower is better)
Translates to: LMQGESLHFSSHRCEQATDIQVS*PPLLNR
Trigger: TCTGTTTAGCAAAGGAGGGCAGCTCACTTGGATGTC...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTAGTCACCCTTCCCTCTaGTGGTATAAACAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFSHPSL*WYKQSP
Trigger: GGGGGACTGTTTATACCAGCAGAGGGAAGGGTGACT...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTAACTTGCTGAAGTCCTaGGTCTGCAGGAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFNLLKS*VCRSSC
Trigger: GCAGGAACTCCTGCAGACCCAGGACTTCAGCAAGTT...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR GCA 90 bp TCTGCACCCTTTTATGAAGGGTCACTAATCAGTCACCCTTCCCTCTGCTGGTATCCAGCTCTTTCTTTTTaGTCTCTTTACCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: SAPFYEGSLISHPSLCWYPALSF*SLYQRH
Trigger: ATGTCTTTGGTAAAGAGAGCAAAAAGAAAGAGCTGG...ATACCAGCAGAGGGAAGGGTGACTGATTAGTGACCCTTCATAAAAGGGTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGTGGTTGGGAAGTTATTaGGAACTTTGGTCAAGTATG +
Preference number: 4 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQWLGSY*ELWSSM
Trigger: CATACTTGACCAAAGTTCCCAATAACTTCCCAACCA...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR TCA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTTTTGGATTAGTAACCTaGTGGAAAGCACGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFFGLVT*WKARWS
Trigger: ACTCCAGCGTGCTTTCCATCAGGTTACTAATCCAAA...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CCA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTTCACCTAATACTGTATaGAGTGACGGGCTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFSPNTV*SDGLRR
Trigger: TCTCCTTAGCCCGTCACTCCATACAGTATTAGGTGA...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS GCA 90 bp CCGAGGCGGGGCCGGCCGGGGCAGGGAATCGGGAGCGACCCACACTaGGCAGGCGCACAGCCCAGCCCGTCGAAGCGCCCTCTGCCGAAT +
Preference number: 5 (lower is better)
Translates to: PRRGRPGQGIGSDPH*AGAQPSPSKRPLPN
Trigger: ATTCGGCAGAGGGCGCTTCGACGGGCTGGGCTGTGCGCCTGCGCAGTGTGGGTCGCTCCCGATTCCCTGCCCCGGCCGGCCCCGCCTCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS GCA 90 bp GGCGTGCAAATGGCAGGTGCGGGGCCGGGCGCCATCACTCATGTCTaGGCTTGGAGGGCGGCACCAGGTGCGGGGGCAGGTCGGCGGGCA +
Preference number: 5 (lower is better)
Translates to: GVQMAGAGPGAITHV*AWRAAPGAGAGRRA
Trigger: TGCCCGCCGACCTGCCCCCGCACCTGGTGCCGCCCTCCAAGCGCAGACATGAGTGATGGCGCCCGGCCCCGCACCTGCCATTTGCACGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000484846.1
ENST00000488711.1
ENST00000621096.4
CDS TCA 90 bp CGCGGGATGGCTCCACGAGACACCCAGTCAGGCACCCTGGTTCCCTaGCTACGCGCCGCGCCCGCCGTTCGCCACGTGCGGTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RGMAPRDTQSGTLVP*LRAAPAVRHVRSSS
Trigger: GCTGGAGGACCGCACGTGGCGAACGGCGGGCGCGGCGCGTAGTCAGGGAACCAGGGTGCCTGACTGGGTGTCTCGTGGAGCCATCCCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359393.6
ENST00000489379.1
CDS CCA 90 bp CACACCCCCGCGGGATGGCTCCACGAGACACCCAGTCAGGCACCCTaGTTCCCTGACTACGCGCCGCGCCCGCCGTTCGCCACGTGCGGT +
Preference number: 5 (lower is better)
Translates to: HTPAGWLHETPSQAP*FPDYAPRPPFATCG
Trigger: ACCGCACGTGGCGAACGGCGGGCGCGGCGCGTAGTCAGGGAACCAGGGTGCCTGACTGGGTGTCTCGTGGAGCCATCCCGCGGGGGTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359393.6
ENST00000489379.1
CDS-3UTR CAA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGAGCTCCGGCTCCTTCTaGCGGCGGGCATCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TARTVATGLQTRPGPGGWSSGSF*RRASLL
Trigger: CAGCAAGGATGCCCGCCGCAAGAAGGAGCCGGAGCT...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS GCA 90 bp GCACCCTGGTTCCCTGACTACGCGCCGCGCCCGCCGTTCGCCACGTaGGGTCCTCCAGCTGGCTCGGAATCCCCGGAAGCATCGGAGTAC +
Preference number: 5 (lower is better)
Translates to: APWFPDYAPRPPFAT*GPPAGSESPEASEY
Trigger: GTACTCCGATGCTTCCGGGGATTCCGAGCCAGCTGGAGGACCGCACGTGGCGAACGGCGGGCGCGGCGCGTAGTCAGGGAACCAGGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359393.6
ENST00000489379.1
CDS GCA 90 bp CCAAGTCGTGTCCAGCCACAGAGGGCTGCGGCCAGCCAGCCTTGCTaGCCTTCTCCCCGGCTCCAGCCCATCCACCACCCCGCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: PSRVQPQRAAASQPC*PSPRLQPIHHPAQP
Trigger: AGGCTGAGCGGGGTGGTGGATGGGCTGGAGCCGGGGAGAAGGGCAGCAAGGCTGGCTGGCCGCAGCCCTCTGTGGCTGGACACGACTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS-3UTR CAA 90 bp CCTGCTTCTGTGACTGCTGAGCGGGGTTGCGCGTCGGAGCCGGTGGGGCGCGGGACCGTGTCCAGCAGCTaGGGCTTCAGCGCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: PASVTAERGCASEPVGRGTVSSS*GFSAWN
Trigger: GTTCCAGGCGCTGAAGCCCAAGCTGCTGGACACGGT...CCCGCGCCCCACCGGCTCCGACGCGCAACCCCGCTCAGCAGTCACAGAAGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGACCGTGTCCAGCAGCTaGGGCTTCAGCGCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: TARTVATGLQTRPGPGGWTVSSS*GFSAWN
Trigger: GTTCCAGGCGCTGAAGCCCAAGCTGCTGGACACGGT...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCCAAACGCGTTGAGCTaGCGGAAGGGGCGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: TWCSTCLGAITARTVATGPNALS*RKGRRG
Trigger: CCCGCGGCGCCCCTTCCGCAAGCTCAACGCGTTTGG...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCACCAAACGCGTTGAGCTaGCGGAAGGGGCGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPPNALS*RKGRRG
Trigger: CCCGCGGCGCCCCTTCCGCAAGCTCAACGCGTTTGG...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CGCACGGGGAGCCTGGGCCCGGGAGGGGAAGGCACAAGAACCCACTTCGCCCGATCAAAGGCGCCGCCCTaGACCACCTGGGAAGGCATC +
Preference number: 5 (lower is better)
Translates to: RTGSLGPGGEGTRTHFARSKAPP*TTWEGI
Trigger: GATGCCTTCCCAGGTGGTCAAGGGCGGCGCCTTTGA...TCGGGCGAAGTGGGTTCTTGTGCCTTCCCCTCCCGGGCCCAGGCTCCCCGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS GCA 90 bp CTCAGATCCCTCGGCCTTGCCAAGTCGTGTCCAGCCACAGAGGGCTaGGGCCAGCCAGCCTTGCTGCCCTTCTCCCCGGCTCCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: LRSLGLAKSCPATEG*GQPALLPFSPAPAH
Trigger: ATGGGCTGGAGCCGGGGAGAAGGGCAGCAAGGCTGGCTGGCCGCAGCCCTCTGTGGCTGGACACGACTTGGCAAGGCCGAGGGATCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS-3UTR CAA 90 bp GGGCCGGCCAGCCCTGCAGCAACTGAAGCATCCACTGGCACCTCAAGTGCTGGTTCCACCACGAGCGCGTaGCCCGGCACCACGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GPASPAATEASTGTSSAGSTTSA*PGTTPS
Trigger: TGAGGGCGTGGTGCCGGGCAACGCGCTCGTGGTGGA...ACCAGCACTTGAGGTGCCAGTGGATGCTTCAGTTGCTGCAGGGCTGGCCGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CAA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGTTCCCTAGCACGGTGTaGGGGAGCTTGGACTTCACC +
Preference number: 5 (lower is better)
Translates to: TARTVATGLQTRPGPGGWFPSTV*GSLDFT
Trigger: GGTGAAGTCCAAGCTCCCCAACACCGTGCTAGGGAA...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS CCA 90 bp CCATTGGCTGATTCCAAATCTCGCGAGGCTGTGGTCCGGGTGCCGTaGCAACCGCACCTGTTTCGCCCCGCCCCTCGTAGGGAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: PLADSKSREAVVRVP*QPHLFRPAPRREAR
Trigger: GCGAGCCTCCCTACGAGGGGCGGGGCGAAACAGGTGCGGTTGCCACGGCACCCGGACCACAGCCTCGCGAGATTTGGAATCAGCCAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489379.1
CDS-3UTR CAA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGAGCTCCGGCTCCTTCTaGCGGCGGGCATCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: WCSTCLGAITARTVATGLSSGSF*RRASLL
Trigger: CAGCAAGGATGCCCGCCGCAAGAAGGAGCCGGAGCT...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGGTGAGCTGCCCTCCTTaGCTAAACAGAGGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: TARTVATGLQTRPGPGGWVSCPP*LNRGGR
Trigger: CCTTCCTCCTCTGTTTAGCAAAGGAGGGCAGCTCAC...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCGGTGCTCCACCTGCCTaGGTGCCATCACAGCCCGGA +
Preference number: 5 (lower is better)
Translates to: TWCSTCLGAITARTVATGGAPPA*VPSQPG
Trigger: TCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACC...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS TCA 90 bp CAGGCTTCCTGCAGGGCCCACCAGCCTGCACGTCCAAATCCCTGCTaGGTGCCGATGGAGCCCACAGAACTCCAATGGGCCCGTGCCACG +
Preference number: 5 (lower is better)
Translates to: QASCRAHQPARPNPC*VPMEPTELQWARAT
Trigger: CGTGGCACGGGCCCATTGGAGTTCTGTGGGCTCCATCGGCACTCAGCAGGGATTTGGACGTGCAGGCTGGTGGGCCCTGCAGGAAGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS GCA 90 bp AAGGCGCCGCCCTTGACCACCTGGGAAGGCATCAGGGACTCCTCCTaGCGCACCATCACCATCAGCCGCGCGATGTCGTTGGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: KAPPLTTWEGIRDSS*RTITISRAMSLASM
Trigger: CATGCTGGCCAACGACATCGCGCGGCTGATGGTGATGGTGCGGCAGGAGGAGTCCCTGATGCCTTCCCAGGTGGTCAAGGGCGGCGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000421510.5
ENST00000484846.1
ENST00000488711.1
ENST00000621096.4
CDS GCA 90 bp CTTCCTGCAGGGCCCACCAGCCTGCACGTCCAAATCCCTGCTGAGTaGCGATGGAGCCCACAGAACTCCAATGGGCCCGTGCCACGCTCC +
Preference number: 5 (lower is better)
Translates to: LPAGPTSLHVQIPAE*RWSPQNSNGPVPRS
Trigger: GGAGCGTGGCACGGGCCCATTGGAGTTCTGTGGGCTCCATCGGCACTCAGCAGGGATTTGGACGTGCAGGCTGGTGGGCCCTGCAGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS CCA 90 bp GCAGGGCCCACCAGCCTGCACGTCCAAATCCCTGCTGAGTGCCGATaGAGCCCACAGAACTCCAATGGGCCCGTGCCACGCTCCACTCCA +
Preference number: 5 (lower is better)
Translates to: AGPTSLHVQIPAECR*SPQNSNGPVPRSTP
Trigger: TGGAGTGGAGCGTGGCACGGGCCCATTGGAGTTCTGTGGGCTCCATCGGCACTCAGCAGGGATTTGGACGTGCAGGCTGGTGGGCCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS-3UTR CAA 90 bp CCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTATCCACCACGAGCGCGTaGCCCGGCACCACGCCCTCA +
Preference number: 5 (lower is better)
Translates to: PGGQGRCKDIQVSCPPLLSTTSA*PGTTPS
Trigger: TGAGGGCGTGGTGCCGGGCAACGCGCTCGTGGTGGA...TAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTCGCAGGCCAGCCGTGCCCGCTaGATCAGGTCATTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: QPQPSSCQKGDLAPPRSQASRAR*IRSLSF
Trigger: GAAGCTCAATGACCTGATCAAGCGGGCACGGCTGGC...CTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTCGCAGAGGAGTTCCTGCATCTaGCGGAGGCTCGGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: QPQPSSCQKGDLAPPRSQRSSCI*RRLGKS
Trigger: GGACTTCCCGAGCCTCCGCAAGATGCAGGAACTCCT...CTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGACCGTGTCCAGCAGCTaGGGCTTCAGCGCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRTVSSS*GFSAWN
Trigger: GTTCCAGGCGCTGAAGCCCAAGCTGCTGGACACGGT...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp TGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCTGTCAAAGGCGCCGCCCTaGACCACCTGGGAAGGCATC +
Preference number: 5 (lower is better)
Translates to: WCSTCLGAITARTVATGLSKAPP*TTWEGI
Trigger: GATGCCTTCCCAGGTGGTCAAGGGCGGCGCCTTTGA...CAGGCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTTGGCGCCCGTGATCTaGCCGTTGACAGGGGACAGC +
Preference number: 5 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRLAPVI*PLTGDS
Trigger: GCTGTCCCCTGTCAACGGCAAGATCACGGGCGCCAA...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp ACCACGGGCTTCCTCTTACCAGCACCAAGCTGTCGTGAGGCCCCGCCACCGCCAGCCAGCCGTGCCCGCTaGATCAGGTCATTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: TTGFLLPAPSCREAPPPPASRAR*IRSLSF
Trigger: GAAGCTCAATGACCTGATCAAGCGGGCACGGCTGGC...TGGCGGTGGCGGGGCCTCACGACAGCTTGGTGCTGGTAAGAGGAAGCCCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGGCCAGCCGTGCCCGCTaGATCAGGTCATTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRASRAR*IRSLSF
Trigger: GAAGCTCAATGACCTGATCAAGCGGGCACGGCTGGC...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CTCTGTCCCTGCTGGCATCACCCCCTCAGACACCAGGGGAGGATGGCCCAGGACAGGAGTTCCTGCATCTaGCGGAGGCTCGGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LCPCWHHPLRHQGRMAQDRSSCI*RRLGKS
Trigger: GGACTTCCCGAGCCTCCGCAAGATGCAGGAACTCCT...GTCCTGGGCCATCCTCCCCTGGTGTCTGAGGGGGTGATGCCAGCAGGGACAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CAA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGAGGAGTTCCTGCATCTaGCGGAGGCTCGGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRRSSCI*RRLGKS
Trigger: GGACTTCCCGAGCCTCCGCAAGATGCAGGAACTCCT...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTTGCGGCGGGCATCCTaGCTGACCCAGCTGAACATA +
Preference number: 5 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRLRRAS*LTQLNI
Trigger: TATGTTCAGCTGGGTCAGCAAGGATGCCCGCCGCAA...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCTTCAGCGCCTGGAACTaGCTGAAGTCCTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: TWCSTCLGAITARTVATGFSAWN*LKSWVC
Trigger: GCAGACCCAGGACTTCAGCAAGTTCCAGGCGCTGAA...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCACTCATGTCTGCGCTaGGAGGGCGGCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLHSCLR*EGGTRC
Trigger: GCACCTGGTGCCGCCCTCCAAGCGCAGACATGAGTG...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CGCACGGGGAGCCTGGGCCCGGGAGGGGAAGGCACAAGAACCCACTTCGCCCGACAGTCTTTATGGACCTaGAGAAATGGTGAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: RTGSLGPGGEGTRTHFARQSLWT*RNGEAS
Trigger: GGAAGCCTCACCATTTCTCAAGGTCCATAAAGACTG...TCGGGCGAAGTGGGTTCTTGTGCCTTCCCCTCCCGGGCCCAGGCTCCCCGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CACCTGGGCCTGACTGGCCCCACCCTTAGTTGCATGTTTGTCACAGGCTATCTGGCAGGGTTGGTCACCTaGCCCCGGCTGCCTTGCCAC +
Preference number: 5 (lower is better)
Translates to: HLGLTGPTLSCMFVTGYLAGLVT*PRLPCH
Trigger: GTGGCAAGGCAGCCGGGGCAAGGTGACCAACCCTGC...CAGATAGCCTGTGACAAACATGCAACTAAGGGTGGGGCCAGTCAGGCCCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS TCA 90 bp GCAGTGTCACCGCCTGGGTCAACTCTGAGTTGGGTGGGGTGCTGGTaGTTAACCCAGCTGCTTCCGTTCAGGGAGGCCCTTCCCCATGGA +
Preference number: 5 (lower is better)
Translates to: AVSPPGSTLSWVGCW*LTQLLPFREALPHG
Trigger: TCCATGGGGAAGGGCCTCCCTGAACGGAAGCAGCTGGGTTAATCACCAGCACCCCACCCAACTCAGAGTTGACCCAGGCGGTGACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498472.1
CDS CCA 90 bp CCGCTACCACCACCGGCTCCCACAGTCCTAGGAGCAGACACAATCTaGCAAGAGCCACAGCTGTCCACTGCCACAGGACAGAGGACAGGA +
Preference number: 5 (lower is better)
Translates to: PLPPPAPTVLGADTI*QEPQLSTATGQRTG
Trigger: TCCTGTCCTCTGTCCTGTGGCAGTGGACAGCTGTGGCTCTTGCCAGATTGTGTCTGCTCCTAGGACTGTGGGAGCCGGTGGTGGTAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS-3UTR CAA 90 bp CCAGCCCTGCAGCAACTGAAGCATCCACTGGCACCTCAAGTGCTGGTCATAGGACACTCATGTCTGCGCTaGGAGGGCGGCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: PALQQLKHPLAPQVLVIGHSCLR*EGGTRC
Trigger: GCACCTGGTGCCGCCCTCCAAGCGCAGACATGAGTG...TCCTATGACCAGCACTTGAGGTGCCAGTGGATGCTTCAGTTGCTGCAGGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CAA 90 bp GAGCAGGACTGGGCAGGGTTGGTCACCTTGCCCCGGCTGCCTTGCCACTCTGTCGAAACCCTTGTTTACTaGATGCCACCCAGTGCCGAG +
Preference number: 5 (lower is better)
Translates to: EQDWAGLVTLPRLPCHSVETLVY*MPPSAE
Trigger: CTCGGCACTGGGTGGCATCAAGTAAACAAGGGTTTC...GACAGAGTGGCAAGGCAGCCGGGGCAAGGTGACCAACCCTGCCCAGTCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS CCA 90 bp CCACGCAGGGTGAGTCACCACATTCCCCTCTGCAGTGTCACCGCCTaGGTCAACTCTGAGTTGGGTGGGGTGCTGGTGATTAACCCAGCT +
Preference number: 5 (lower is better)
Translates to: PRRVSHHIPLCSVTA*VNSELGGVLVINPA
Trigger: AGCTGGGTTAATCACCAGCACCCCACCCAACTCAGAGTTGACCCAGGCGGTGACACTGCAGAGGGGAATGTGGTGACTCACCCTGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498472.1
CDS-3UTR CAA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGGCACACATGAACCTGTaGAGGAAAGCGTTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRAHMNL*RKALPN
Trigger: GTTTGGCAACGCTTTCCTCAACAGGTTCATGTGTGC...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp ACAGCCCGGACAGTGGCCACTGGCCTGCAAACGCGCCCGGGCCCTGGAGGCTGGACCAGCTCTTTCTTTTaGCTCTCTTTACCAAAGACA +
Preference number: 5 (lower is better)
Translates to: TARTVATGLQTRPGPGGWTSSFF*LSLPKT
Trigger: TGTCTTTGGTAAAGAGAGCAAAAAGAAAGAGCTGGT...CCAGCCTCCAGGGCCCGGGCGCGTTTGCAGGCCAGTGGCCACTGTCCGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTATTCCCTAGCACGGTGTaGGGGAGCTTGGACTTCACC +
Preference number: 5 (lower is better)
Translates to: PGGQGRCKDIQVSCPPLLFPSTV*GSLDFT
Trigger: GGTGAAGTCCAAGCTCCCCAACACCGTGCTAGGGAA...TAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTGGTGCTCCACCTGCCTaGGTGCCATCACAGCCCGGA +
Preference number: 5 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSGAPPA*VPSQPG
Trigger: TCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACC...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS GCA 90 bp CCCCGAGAGCAGAGCCTCCAAGGACACTCCAAGGATACTCCAAGGTaGTCGCTCAGGAACAGGGAAGCAGGAGGGATGGGTCAAGCTCAA +
Preference number: 5 (lower is better)
Translates to: PREQSLQGHSKDTPR*SLRNREAGGMGQAQ
Trigger: TTGAGCTTGACCCATCCCTCCTGCTTCCCTGTTCCTGAGCGAGCACCTTGGAGTATCCTTGGAGTGTCCTTGGAGGCTCTGCTCTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS CCA 90 bp CTGGTGATTAACCCAGCTGCTTCCGTTCAGGGAGGCCCTTCCCCATaGAGATGGGATTCCCTCCAAATCCAGTGCCCTGGGCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LVINPAASVQGGPSP*RWDSLQIQCPGPSF
Trigger: GAAGGAAGGCCCAGGGCACTGGATTTGGAGGGAATCCCATCTCCATGGGGAAGGGCCTCCCTGAACGGAAGCAGCTGGGTTAATCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498472.1
CDS-3UTR CAA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACTTGCGGCGGGCATCCTaGCTGACCCAGCTGAACATA +
Preference number: 5 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNLRRAS*LTQLNI
Trigger: TATGTTCAGCTGGGTCAGCAAGGATGCCCGCCGCAA...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGAGCACCATAGGCTTGTaGTCGAAGTCAGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLSTIGL*SKSASS
Trigger: GGAGGACGCTGACTTCGACAACAAGCCTATGGTGCT...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp GGAGCTGGGATGACCACCCTTCCTCAGCCAGGAAATGCAACACTGGGGTCCAGGAGCACCATAGGCTTGTaGTCGAAGTCAGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GAGMTTLPQPGNATLGSRSTIGL*SKSASS
Trigger: GGAGGACGCTGACTTCGACAACAAGCCTATGGTGCT...CCTGGACCCCAGTGTTGCATTTCCTGGCTGAGGAAGGGTGGTCATCCCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp AGAGGCGAGGAAACATCCGCTCAGTCTTTATGGACCTTGAGAAATGGTGAGGCTTCCACCACGAGCGCGTaGCCCGGCACCACGCCCTCA +
Preference number: 5 (lower is better)
Translates to: RGEETSAQSLWTLRNGEASTTSA*PGTTPS
Trigger: TGAGGGCGTGGTGCCGGGCAACGCGCTCGTGGTGGA...AGCCTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGATGTTTCCTCGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CACCTGGGCCTGACTGGCCCCACCCTTAGTTGCATGTTTGTCACAGGCTATCTGACCACCTCGGGGGTGTaGATGATCTTGCCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: HLGLTGPTLSCMFVTGYLTTSGV*MILPRD
Trigger: GTCCCTGGGCAAGATCATCAACACCCCCGAGGTGGT...CAGATAGCCTGTGACAAACATGCAACTAAGGGTGGGGCCAGTCAGGCCCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CAA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCTTCAGCGCCTGGAACTaGCTGAAGTCCTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: HCNFNSDFPARTAPASILFSAWN*LKSWVC
Trigger: GCAGACCCAGGACTTCAGCAAGTTCCAGGCGCTGAA...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCTTCCCTAGCACGGTGTaGGGGAGCTTGGACTTCACC +
Preference number: 5 (lower is better)
Translates to: HCNFNSDFPARTAPASILFPSTV*GSLDFT
Trigger: GGTGAAGTCCAAGCTCCCCAACACCGTGCTAGGGAA...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTTGTAAGGACACACTCATGTCTGCGCTaGGAGGGCGGCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: QGSGFLLLNLGARGVVRTHSCLR*EGGTRC
Trigger: GCACCTGGTGCCGCCCTCCAAGCGCAGACATGAGTG...TGTCCTTACAACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp ACCTGGTGCTCCACCTGCCTTGGTGCCATCACAGCCCGGACAGTGGCCACTGGCCAGTCTTTATGGACCTaGAGAAATGGTGAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TWCSTCLGAITARTVATGQSLWT*RNGEAS
Trigger: GGAAGCCTCACCATTTCTCAAGGTCCATAAAGACTG...GCCAGTGGCCACTGTCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGGTACTTAAACCGTCCTaGGGGCTAGCAAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLVLKPS*GLARSQ
Trigger: CTGGCTCCTTGCTAGCCCCAAGGACGGTTTAAGTAC...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CAA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCGTGAGCTGCCCTCCTTaGCTAAACAGAGGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: HCNFNSDFPARTAPASILVSCPP*LNRGGR
Trigger: CCTTCCTCCTCTGTTTAGCAAAGGAGGGCAGCTCAC...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp AGAGGCGAGGAAACATCCGCTCAGTCTTTATGGACCTTGAGAAATGGTGAGGCTCAGGACTGGGCAGGGTaGGTCACCTTGCCCCGGCTG +
Preference number: 5 (lower is better)
Translates to: RGEETSAQSLWTLRNGEAQDWAG*VTLPRL
Trigger: CAGCCGGGGCAAGGTGACCAACCCTGCCCAGTCCTG...AGCCTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGATGTTTCCTCGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CAA 90 bp AAAGAAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTCCAAACGCGTTGAGCTaGCGGAAGGGGCGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: KERWWFSFSRGEETSAQSPNALS*RKGRRG
Trigger: CCCGCGGCGCCCCTTCCGCAAGCTCAACGCGTTTGG...AGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCCTGTTGAGGAAAGCGTaGCCAAACGCGTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: HCNFNSDFPARTAPASILLLRKA*PNALSL
Trigger: CAAGCTCAACGCGTTTGGCAACGCTTTCCTCAACAG...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGTCGCAGACCAGCTCTTTCTTTTaGCTCTCTTTACCAAAGACA +
Preference number: 5 (lower is better)
Translates to: QPQPSSCQKGDLAPPRSQTSSFF*LSLPKT
Trigger: TGTCTTTGGTAAAGAGAGCAAAAAGAAAGAGCTGGT...CTGCGACCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp TCCATGCAGCCTCAGCCTAGCAGCTGCCAAAAGGGCGACCTGGCTCCCCCACGGGCTTTTGAACAGTGGTaGGGAAGTTATTGGGAACTT +
Preference number: 5 (lower is better)
Translates to: SMQPQPSSCQKGDLAPPRAFEQW*GSYWEL
Trigger: AAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGC...CCGTGGGGGAGCCAGGTCGCCCTTTTGGCAGCTGCTAGGCTGAGGCTGCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CCAGCCCTGCAGCAACTGAAGCATCCACTGGCACCTCAAGTGCTGGTCATAGGACACAGGCTATCTGCTTaGTCTTCAGAGGCCCGGCTT +
Preference number: 5 (lower is better)
Translates to: PALQQLKHPLAPQVLVIGHRLSA*SSEARL
Trigger: AAGCCGGGCCTCTGAAGACAAAGCAGATAGCCTGTG...TCCTATGACCAGCACTTGAGGTGCCAGTGGATGCTTCAGTTGCTGCAGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CAA 90 bp ACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCACCTAATACTGTATGGAGTAGCACCATAGGCTTGTaGTCGAAGTCAGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: TSRQGQRPHPSSPNTVWSSTIGL*SKSASS
Trigger: GGAGGACGCTGACTTCGACAACAAGCCTATGGTGCT...ACTCCATACAGTATTAGGTGAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp AGAGGCGAGGAAACATCCGCTCAGTCTTTATGGACCTTGAGAAATGGTGAGGCTTTGGCGCCCGTGATCTaGCCGTTGACAGGGGACAGC +
Preference number: 5 (lower is better)
Translates to: RGEETSAQSLWTLRNGEALAPVI*PLTGDS
Trigger: GCTGTCCCCTGTCAACGGCAAGATCACGGGCGCCAA...AGCCTCACCATTTCTCAAGGTCCATAAAGACTGAGCGGATGTTTCCTCGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS GCA 90 bp GTGGTTGCCAGCTTTATCCAAGCATCAATACCTTGCTTAGGCATGTaGCTGTTCAGGGCGGCACCCCCTTCATTTCCCTGCAGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: VVASFIQASIPCLGM*LFRAAPPSFPCSKL
Trigger: CAGCTTGCTGCAGGGAAATGAAGGGGGTGCCGCCCTGAACAGGCACATGCCTAAGCAAGGTATTGATGCTTGGATAAAGCTGGCAACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS GCA 90 bp AGGCTTCTCCTGGTGGTTGCCAGCTTTATCCAAGCATCAATACCTTaGTTAGGCATGTGCCTGTTCAGGGCGGCACCCCCTTCATTTCCC +
Preference number: 5 (lower is better)
Translates to: RLLLVVASFIQASIP*LGMCLFRAAPPSFP
Trigger: GGGAAATGAAGGGGGTGCCGCCCTGAACAGGCACATGCCTAAGCAAGGTATTGATGCTTGGATAAAGCTGGCAACCACCAGGAGAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS-3UTR CAA 90 bp CACCTGGGCCTGACTGGCCCCACCCTTAGTTGCATGTTTGTCACAGGCTATCTGGCACACATGAACCTGTaGAGGAAAGCGTTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: HLGLTGPTLSCMFVTGYLAHMNL*RKALPN
Trigger: GTTTGGCAACGCTTTCCTCAACAGGTTCATGTGTGC...CAGATAGCCTGTGACAAACATGCAACTAAGGGTGGGGCCAGTCAGGCCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CAA 90 bp CAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTTGTAAGGACAGGTTCTGGTTTCTTATaGCTCAACCTGGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QGSGFLLLNLGARGVVRTGSGFL*LNLGAR
Trigger: CCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACC...TGTCCTTACAACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp GCAGTCCTCAGTCTCGGACTCTCCCTCTGTGAAATGGGGGAACATGAACTTCCTCTGTTGAGGAAAGCGTaGCCAAACGCGTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: AVLSLGLSLCEMGEHELPLLRKA*PNALSL
Trigger: CAAGCTCAACGCGTTTGGCAACGCTTTCCTCAACAG...AGGAAGTTCATGTTCCCCCATTTCACAGAGGGAGAGTCCGAGACTGAGGACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CAA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGTCAAAGGCGCCGCCCTaGACCACCTGGGAAGGCATC +
Preference number: 5 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQSKAPP*TTWEGI
Trigger: GATGCCTTCCCAGGTGGTCAAGGGCGGCGCCTTTGA...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp AAAGAAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTTTGGCGCCCGTGATCTaGCCGTTGACAGGGGACAGC +
Preference number: 5 (lower is better)
Translates to: KERWWFSFSRGEETSAQSLAPVI*PLTGDS
Trigger: GCTGTCCCCTGTCAACGGCAAGATCACGGGCGCCAA...AGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CAACCTGGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGGCTTTTGAACAGTGGTaGGGAAGTTATTGGGAACTT +
Preference number: 5 (lower is better)
Translates to: QPGGQGRCKDIQVSCPPLAFEQW*GSYWEL
Trigger: AAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGC...CAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCCAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACCCCTTAGTTGCATGTTaGTCACAGGCTATCTGCTTT +
Preference number: 5 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNPLVAC*SQAICF
Trigger: AAAGCAGATAGCCTGTGACAAACATGCAACTAAGGG...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS TCA 90 bp GCTGTCCACTGCCACAGGACAGAGGACAGGACAGGAAAACGCACTTaGAACAGAAGACAACAGCCTTGGCCTTGCACGGATCATTGTGAT +
Preference number: 5 (lower is better)
Translates to: AVHCHRTEDRTGKRT*NRRQQPWPCTDHCD
Trigger: ATCACAATGATCCGTGCAAGGCCAAGGCTGTTGTCTTCTGTTTCAAGTGCGTTTTCCTGTCCTGTCCTCTGTCCTGTGGCAGTGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS-3UTR CAA 90 bp TCTGCACCCTTTTATGAAGGGTCACTAATCAGTCACCCTTCCCTCTGCTGGTATTTGCGGCGGGCATCCTaGCTGACCCAGCTGAACATA +
Preference number: 5 (lower is better)
Translates to: SAPFYEGSLISHPSLCWYLRRAS*LTQLNI
Trigger: TATGTTCAGCTGGGTCAGCAAGGATGCCCGCCGCAA...ATACCAGCAGAGGGAAGGGTGACTGATTAGTGACCCTTCATAAAAGGGTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CAA 90 bp CAAGGTTCTGGTTTCTTATTGCTCAACCTGGGGGCCAGGGGCGTTGTAAGGACAGCACACATGAACCTGTaGAGGAAAGCGTTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: QGSGFLLLNLGARGVVRTAHMNL*RKALPN
Trigger: GTTTGGCAACGCTTTCCTCAACAGGTTCATGTGTGC...TGTCCTTACAACGCCCCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp TTAATGCAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTACCACCTCGGGGGTGTaGATGATCTTGCCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LMQGESLHFSSHRCEQATTTSGV*MILPRD
Trigger: GTCCCTGGGCAAGATCATCAACACCCCCGAGGTGGT...AGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTGCATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp AAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTTTATACCACCTCGGGGGTGTaGATGATCTTGCCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: KDGGFPFREARKHPLSLYTTSGV*MILPRD
Trigger: GTCCCTGGGCAAGATCATCAACACCCCCGAGGTGGT...ATAAAGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp GGGGGCCAGGGGCGTTGTAAGGACATCCAAGTGAGCTGCCCTCCTTTGCTAAACACCAGCTCTTTCTTTTaGCTCTCTTTACCAAAGACA +
Preference number: 5 (lower is better)
Translates to: GGQGRCKDIQVSCPPLLNTSSFF*LSLPKT
Trigger: TGTCTTTGGTAAAGAGAGCAAAAAGAAAGAGCTGGT...GTTTAGCAAAGGAGGGCAGCTCACTTGGATGTCCTTACAACGCCCCTGGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp AAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTTCAACAGTTCAGCGCCTGGAACTaGCTGAAGTCCTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: KVFTSLPTGVNKPLQLQQFSAWN*LKSWVC
Trigger: GCAGACCCAGGACTTCAGCAAGTTCCAGGCGCTGAA...CTGTTGAAGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CACTGCAACTTCAACAGTGACTTCCCGGCAAGGACAGCGCCCGCATCCATCCTCCAAAAATCACAGCTTTaGAACAGTGGTTGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: HCNFNSDFPARTAPASILQKSQL*NSGWEV
Trigger: AACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTG...GAGGATGGATGCGGGCGCTGTCCTTGCCGGGAAGTCACTGTTGAAGTTGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTGGTTCTGGTTTCTTATaGCTCAACCTGGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QGESLHFSSHRCEQATATGSGFL*LNLGAR
Trigger: CCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACC...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTGGTGCTCCACCTGCCTaGGTGCCATCACAGCCCGGA +
Preference number: 5 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFGAPPA*VPSQPG
Trigger: TCCGGGCTGTGATGGCACCAAGGCAGGTGGAGCACC...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTCTGTTGAGGAAAGCGTaGCCAAACGCGTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: QGESLHFSSHRCEQATATLLRKA*PNALSL
Trigger: CAAGCTCAACGCGTTTGGCAACGCTTTCCTCAACAG...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp AAAGAAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTGTGAGCTGCCCTCCTTaGCTAAACAGAGGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: KERWWFSFSRGEETSAQSVSCPP*LNRGGR
Trigger: CCTTCCTCCTCTGTTTAGCAAAGGAGGGCAGCTCAC...AGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTCACACACAGACCCCTTaGGCTGTCCAGGCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFHTQTP*AVQAGE
Trigger: CTCACCAGCCTGGACAGCCAAAGGGGTCTGTGTGTG...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621096.4
CDS CCA 90 bp CTGTTTCTGTGTTGTAAGCACAGTCAAACCCTTCCTGAAAGTAGATaGGGTATAAACCACAAACAGAACAGGTTTAGAGGGAGGCCGGGT +
Preference number: 5 (lower is better)
Translates to: LFLCCKHSQTLPESR*GINHKQNRFRGRPG
Trigger: ACCCGGCCTCCCTCTAAACCTGTTCTGTTTGTGGTTTATACCCCATCTACTTTCAGGAAGGGTTTGACTGTGCTTACAACACAGAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466015.1
CDS-3UTR CAA 90 bp GGGAGACAAAAATCACAGCTTTTGAACAGTGGTTGGGAAGTTATTGGGAACTTTGGTTCTGGTTTCTTATaGCTCAACCTGGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GRQKSQLLNSGWEVIGNFGSGFL*LNLGAR
Trigger: CCTGGCCCCCAGGTTGAGCAATAAGAAACCAGAACC...AAAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTGTCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp AAAGATGGTGGTTTTCCTTTTCGAGAGGCGAGGAAACATCCGCTCAGTCTTTATTGGTTCTTCAGAGCCTaGATCACTTCCGAGAACTCA +
Preference number: 5 (lower is better)
Translates to: KDGGFPFREARKHPLSLYWFFRA*ITSENS
Trigger: TGAGTTCTCGGAAGTGATCAAGGCTCTGAAGAACCA...ATAAAGACTGAGCGGATGTTTCCTCGCCTCTCGAAAAGGAAAACCACCATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS-3UTR CAA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTGCTTTTGAACAGTGGTaGGGAAGTTATTGGGAACTT +
Preference number: 5 (lower is better)
Translates to: QGESLHFSSHRCEQATATAFEQW*GSYWEL
Trigger: AAGTTCCCAATAACTTCCCAACCACTGTTCAAAAGC...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS GCA 90 bp ATGACGAAGGATTTGAAAAATCCCAAAAAGGCTTCTCCTGGTGGTTaGCAGCTTTATCCAAGCATCAATACCTTGCTTAGGCATGTGCCT +
Preference number: 5 (lower is better)
Translates to: MTKDLKNPKKASPGG*QLYPSINTLLRHVP
Trigger: AGGCACATGCCTAAGCAAGGTATTGATGCTTGGATAAAGCTGGCAACCACCAGGAGAAGCCTTTTTGGGATTTTTCAAATCCTTCGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS-3UTR CAA 90 bp TCTGCACCCTTTTATGAAGGGTCACTAATCAGTCACCCTTCCCTCTGCTGGTATCAAAAATCACAGCTTTaGAACAGTGGTTGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: SAPFYEGSLISHPSLCWYQKSQL*NSGWEV
Trigger: AACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTG...ATACCAGCAGAGGGAAGGGTGACTGATTAGTGACCCTTCATAAAAGGGTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS-3UTR CAA 90 bp CAAGGAGAAAGTCTTCACTTCTCTTCCCACAGGTGTGAACAAGCCACTGCAACTCAAAAATCACAGCTTTaGAACAGTGGTTGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: QGESLHFSSHRCEQATATQKSQL*NSGWEV
Trigger: AACTTCCCAACCACTGTTCAAAAGCTGTGATTTTTG...AGTTGCAGTGGCTTGTTCACACCTGTGGGAAGAGAAGTGAAGACTTTCTCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000621096.4
CDS GCA 72 bp GGCCGGCCGGGGCAGGGAATCGGGAGCGACCCACACTaGGCAGGCGCACAGCCCAGCCCGTCGAAGCGCCCT +
Preference number: 6 (lower is better)
Translates to: GRPGQGIGSDPH*AGAQPSPSKRP
Trigger: AGGGCGCTTCGACGGGCTGGGCTGTGCGCCTGCGCAGTGTGGGTCGCTCCCGATTCCCTGCCCCGGCCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320631.8
CDS CAA 90 bp GCAAATGGCAGGTGCGGGGCCGGGCGCCATCACTCATGTCTGCGCTaGGAGGGCGGCACCAGGTGCGGGGGCAGGTCGGCGGGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: ANGRCGAGRHHSCLR*EGGTRCGGRSAGSS
Trigger: CGAGCTGCCCGCCGACCTGCCCCCGCACCTGGTGCCGCCCTCCAAGCGCAGACATGAGTGATGGCGCCCGGCCCCGCACCTGCCATTTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000484846.1
ENST00000488711.1
ENST00000621096.4
CDS TCA 72 bp GCTCCACGAGACACCCAGTCAGGCACCCTGGTTCCCTaGCTACGCGCCGCGCCCGCCGTTCGCCACGTGCGG +
Preference number: 6 (lower is better)
Translates to: APRDTQSGTLVP*LRAAPAVRHVR
Trigger: CCGCACGTGGCGAACGGCGGGCGCGGCGCGTAGTCAGGGAACCAGGGTGCCTGACTGGGTGTCTCGTGGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359393.6
ENST00000489379.1
CDS CCA 72 bp GCCGCGCCCGCCGTTCGCCACGTGCGGTCCTCCAGCTaGCTCGGAATCCCCGGAAGCATCGGAGTACCCCCA +
Preference number: 6 (lower is better)
Translates to: AAPAVRHVRSSS*LGIPGSIGVPP
Trigger: TGGGGGTACTCCGATGCTTCCGGGGATTCCGAGCCAGCTGGAGGACCGCACGTGGCGAACGGCGGGCGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359393.6
ENST00000489379.1
CDS CCA 72 bp GCGGGATGGCTCCACGAGACACCCAGTCAGGCACCCTaGTTCCCTGACTACGCGCCGCGCCCGCCGTTCGCC +
Preference number: 6 (lower is better)
Translates to: AGWLHETPSQAP*FPDYAPRPPFA
Trigger: GGCGAACGGCGGGCGCGGCGCGTAGTCAGGGAACCAGGGTGCCTGACTGGGTGTCTCGTGGAGCCATCCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359393.6
ENST00000489379.1
CDS GCA 72 bp TTCCCTGACTACGCGCCGCGCCCGCCGTTCGCCACGTaGGGTCCTCCAGCTGGCTCGGAATCCCCGGAAGCA +
Preference number: 6 (lower is better)
Translates to: FPDYAPRPPFAT*GPPAGSESPEA
Trigger: TGCTTCCGGGGATTCCGAGCCAGCTGGAGGACCGCACGTGGCGAACGGCGGGCGCGGCGCGTAGTCAGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359393.6
ENST00000489379.1
CDS GCA 72 bp GCTGGGAAGGGTCTCGGGCAATCCTGGGGCCCTGAGTaGCAGTCTCAGAGCCCCATGGCCCTGCCTGGCAAT +
Preference number: 6 (lower is better)
Translates to: AGKGLGQSWGPE*QSQSPMALPGN
Trigger: ATTGCCAGGCAGGGCCATGGGGCTCTGAGACTGGCACTCAGGGCCCCAGGATTGCCCGAGACCCTTCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466015.1
CDS GCA 72 bp GAGCAGGGAGCAGGCTTCCTGCAGGGCCCACCAGCCTaGACGTCCAAATCCCTGCTGAGTGCCGATGGAGCC +
Preference number: 6 (lower is better)
Translates to: EQGAGFLQGPPA*TSKSLLSADGA
Trigger: GGCTCCATCGGCACTCAGCAGGGATTTGGACGTGCAGGCTGGTGGGCCCTGCAGGAAGCCTGCTCCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS CCA 72 bp GATTCCAAATCTCGCGAGGCTGTGGTCCGGGTGCCGTaGCAACCGCACCTGTTTCGCCCCGCCCCTCGTAGG +
Preference number: 6 (lower is better)
Translates to: DSKSREAVVRVP*QPHLFRPAPRR
Trigger: CCTACGAGGGGCGGGGCGAAACAGGTGCGGTTGCCACGGCACCCGGACCACAGCCTCGCGAGATTTGGAATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489379.1
CDS GCA 72 bp GGGCCCACCAGCCTGCACGTCCAAATCCCTGCTGAGTaGCGATGGAGCCCACAGAACTCCAATGGGCCCGTG +
Preference number: 6 (lower is better)
Translates to: GPTSLHVQIPAE*RWSPQNSNGPV
Trigger: CACGGGCCCATTGGAGTTCTGTGGGCTCCATCGGCACTCAGCAGGGATTTGGACGTGCAGGCTGGTGGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS GCA 72 bp TCTCCCAACCCGGCCCTAAGCAAGGCTGGGAAAGGCTaGCTGGGGTGCTTGGCTCCCACATGGAGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SPNPALSKAGKG*LGCLAPTWRSW
Trigger: CCAGCTCCTCCATGTGGGAGCCAAGCACCCCAGGCAGCCTTTCCCAGCCTTGCTTAGGGCCGGGTTGGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS CCA 72 bp CGCCCCCATTGGCTGATTCCAAATCTCGCGAGGCTGTaGTCCGGGTGCCGTGGCAACCGCACCTGTTTCGCC +
Preference number: 6 (lower is better)
Translates to: RPHWLIPNLARL*SGCRGNRTCFA
Trigger: GGCGAAACAGGTGCGGTTGCCACGGCACCCGGACCACAGCCTCGCGAGATTTGGAATCAGCCAATGGGGGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489379.1
CDS TCA 72 bp TGCAGGGCCCACCAGCCTGCACGTCCAAATCCCTGCTaGGTGCCGATGGAGCCCACAGAACTCCAATGGGCC +
Preference number: 6 (lower is better)
Translates to: CRAHQPARPNPC*VPMEPTELQWA
Trigger: GGCCCATTGGAGTTCTGTGGGCTCCATCGGCACTCAGCAGGGATTTGGACGTGCAGGCTGGTGGGCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS GCA 72 bp CCCTTGACCACCTGGGAAGGCATCAGGGACTCCTCCTaGCGCACCATCACCATCAGCCGCGCGATGTCGTTG +
Preference number: 6 (lower is better)
Translates to: PLTTWEGIRDSS*RTITISRAMSL
Trigger: CAACGACATCGCGCGGCTGATGGTGATGGTGCGGCAGGAGGAGTCCCTGATGCCTTCCCAGGTGGTCAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320631.8
ENST00000359393.6
ENST00000421510.5
ENST00000484846.1
ENST00000488711.1
ENST00000621096.4
CDS CCA 72 bp ACCAGCCTGCACGTCCAAATCCCTGCTGAGTGCCGATaGAGCCCACAGAACTCCAATGGGCCCGTGCCACGC +
Preference number: 6 (lower is better)
Translates to: TSLHVQIPAECR*SPQNSNGPVPR
Trigger: GCGTGGCACGGGCCCATTGGAGTTCTGTGGGCTCCATCGGCACTCAGCAGGGATTTGGACGTGCAGGCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS TCA 72 bp AGAGGGAAACAGCGCAGTGCAGGTCTGCCTGTGAAGTaGGCTGGGAAGGGTCTCGGGCAATCCTGGGGCCCT +
Preference number: 6 (lower is better)
Translates to: RGKQRSAGLPVK*AGKGLGQSWGP
Trigger: AGGGCCCCAGGATTGCCCGAGACCCTTCCCAGCTCACTTCACAGGCAGACCTGCACTGCGCTGTTTCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466015.1
CDS CCA 72 bp GCTGCTTCCGTTCAGGGAGGCCCTTCCCCATGGAGATaGGATTCCCTCCAAATCCAGTGCCCTGGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: AASVQGGPSPWR*DSLQIQCPGPS
Trigger: GGAAGGCCCAGGGCACTGGATTTGGAGGGAATCCCATCTCCATGGGGAAGGGCCTCCCTGAACGGAAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498472.1
CDS TCA 72 bp CCGCCTGGGTCAACTCTGAGTTGGGTGGGGTGCTGGTaGTTAACCCAGCTGCTTCCGTTCAGGGAGGCCCTT +
Preference number: 6 (lower is better)
Translates to: PPGSTLSWVGCW*LTQLLPFREAL
Trigger: AAGGGCCTCCCTGAACGGAAGCAGCTGGGTTAATCACCAGCACCCCACCCAACTCAGAGTTGACCCAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498472.1
CDS GCA 72 bp ATGTGCCTGTTCAGGGCGGCACCCCCTTCATTTCCCTaGAGCAAGCTGGGAACCTGGCAGCCCTCGAGAGTA +
Preference number: 6 (lower is better)
Translates to: MCLFRAAPPSFP*SKLGTWQPSRV
Trigger: TACTCTCGAGGGCTGCCAGGTTCCCAGCTTGCTGCAGGGAAATGAAGGGGGTGCCGCCCTGAACAGGCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS CCA 72 bp CCACCGGCTCCCACAGTCCTAGGAGCAGACACAATCTaGCAAGAGCCACAGCTGTCCACTGCCACAGGACAG +
Preference number: 6 (lower is better)
Translates to: PPAPTVLGADTI*QEPQLSTATGQ
Trigger: CTGTCCTGTGGCAGTGGACAGCTGTGGCTCTTGCCAGATTGTGTCTGCTCCTAGGACTGTGGGAGCCGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS TCA 72 bp CCACATGGAGGAGCTGGGATTGGAACCCCGGGCTGCTaGAGGTGCCCCACAGCCCATGTTCTTCTGTTTCTC +
Preference number: 6 (lower is better)
Translates to: PHGGAGIGTPGC*RCPTAHVLLFL
Trigger: GAGAAACAGAAGAACATGGGCTGTGGGGCACCTTCAGCAGCCCGGGGTTCCAATCCCAGCTCCTCCATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS CAA 90 bp CACCACATTCCCCTCTGCAGTGTCACCGCCTGGGTCAACTCTGAGTaGGGTGGGGTGCTGGTGATTAACCCAGCTGCTTCCGTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: HHIPLCSVTAWVNSE*GGVLVINPAASVQG
Trigger: TCCCTGAACGGAAGCAGCTGGGTTAATCACCAGCACCCCACCCAACTCAGAGTTGACCCAGGCGGTGACACTGCAGAGGGGAATGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498472.1
CDS CCA 72 bp GTGAGTCACCACATTCCCCTCTGCAGTGTCACCGCCTaGGTCAACTCTGAGTTGGGTGGGGTGCTGGTGATT +
Preference number: 6 (lower is better)
Translates to: VSHHIPLCSVTA*VNSELGGVLVI
Trigger: AATCACCAGCACCCCACCCAACTCAGAGTTGACCCAGGCGGTGACACTGCAGAGGGGAATGTGGTGACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498472.1
CDS CAA 72 bp CCTGGTGGTTGCCAGCTTTATCCAAGCATCAATACCTaGCTTAGGCATGTGCCTGTTCAGGGCGGCACCCCC +
Preference number: 6 (lower is better)
Translates to: PGGCQLYPSINT*LRHVPVQGGTP
Trigger: GGGGGTGCCGCCCTGAACAGGCACATGCCTAAGCAAGGTATTGATGCTTGGATAAAGCTGGCAACCACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS GCA 72 bp CTGGTGGTTGCCAGCTTTATCCAAGCATCAATACCTTaGTTAGGCATGTGCCTGTTCAGGGCGGCACCCCCT +
Preference number: 6 (lower is better)
Translates to: LVVASFIQASIP*LGMCLFRAAPP
Trigger: AGGGGGTGCCGCCCTGAACAGGCACATGCCTAAGCAAGGTATTGATGCTTGGATAAAGCTGGCAACCACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS CAA 72 bp CTGCCACAGGACAGAGGACAGGACAGGAAAACGCACTaGAAACAGAAGACAACAGCCTTGGCCTTGCACGGA +
Preference number: 6 (lower is better)
Translates to: LPQDRGQDRKTH*KQKTTALALHG
Trigger: TCCGTGCAAGGCCAAGGCTGTTGTCTTCTGTTTCAAGTGCGTTTTCCTGTCCTGTCCTCTGTCCTGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS CAA 90 bp AAGGCTTCTCCTGGTGGTTGCCAGCTTTATCCAAGCATCAATACCTaGCTTAGGCATGTGCCTGTTCAGGGCGGCACCCCCTTCATTTCC +
Preference number: 6 (lower is better)
Translates to: KASPGGCQLYPSINT*LRHVPVQGGTPFIS
Trigger: GGAAATGAAGGGGGTGCCGCCCTGAACAGGCACATGCCTAAGCAAGGTATTGATGCTTGGATAAAGCTGGCAACCACCAGGAGAAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS TCA 72 bp TGCCACAGGACAGAGGACAGGACAGGAAAACGCACTTaGAACAGAAGACAACAGCCTTGGCCTTGCACGGAT +
Preference number: 6 (lower is better)
Translates to: CHRTEDRTGKRT*NRRQQPWPCTD
Trigger: ATCCGTGCAAGGCCAAGGCTGTTGTCTTCTGTTTCAAGTGCGTTTTCCTGTCCTGTCCTCTGTCCTGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS CAA 72 bp CTCCACTCCATCATCACAGCTCGGATGACGAAGGATTaGAAAAATCCCAAAAAGGCTTCTCCTGGTGGTTGC +
Preference number: 6 (lower is better)
Translates to: LHSIITARMTKD*KNPKKASPGGC
Trigger: GCAACCACCAGGAGAAGCCTTTTTGGGATTTTTCAAATCCTTCGTCATCCGAGCTGTGATGATGGAGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS GCA 72 bp GATTTGAAAAATCCCAAAAAGGCTTCTCCTGGTGGTTaGCAGCTTTATCCAAGCATCAATACCTTGCTTAGG +
Preference number: 6 (lower is better)
Translates to: DLKNPKKASPGG*QLYPSINTLLR
Trigger: CCTAAGCAAGGTATTGATGCTTGGATAAAGCTGGCAACCACCAGGAGAAGCCTTTTTGGGATTTTTCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484846.1
CDS CCA 72 bp TGTTGTAAGCACAGTCAAACCCTTCCTGAAAGTAGATaGGGTATAAACCACAAACAGAACAGGTTTAGAGGG +
Preference number: 6 (lower is better)
Translates to: CCKHSQTLPESR*GINHKQNRFRG
Trigger: CCCTCTAAACCTGTTCTGTTTGTGGTTTATACCCCATCTACTTTCAGGAAGGGTTTGACTGTGCTTACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466015.1
CDS CCA 72 bp GACGAAGGATTTGAAAAATCCCAAAAAGGCTTCTCCTaGTGGTTGCCAGCTTTATCCAAGCATCAATACCTT +
Preference number: 6 (lower is better)
Translates to: DEGFEKSQKGFS*WLPALSKHQYL
Trigger: AAGGTATTGATGCTTGGATAAAGCTGGCAACCACCAGGAGAAGCCTTTTTGGGATTTTTCAAATCCTTCGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484846.1