RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EGR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000179388

Ensembl transcript IDs: ENST00000317216.3, ENST00000518773.1, ENST00000519492.1, ENST00000522910.1, ENST00000524088.1

Found 373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACGCACACACTCGCGCGCATCCCCGCACGCAGGCGCGCGTGCGTaGGGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTACCCCC +
Preference number: 1 (lower is better)
Translates to: ARTHSRASPHAGARA*GGQQALRFGALLTP
Trigger: GGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCCGCACGCACGCGCGCCTGCGTGCGGGGATGCGCGCGAGTGTGTGCGTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR GCA 90 bp GCGAGCACGCACACACTCGCGCGCATCCCCGCACGCAGGCGCGCGTaGGTGCGGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTAC +
Preference number: 1 (lower is better)
Translates to: ASTHTLARIPARRRA*VRRAASSALWCAPY
Trigger: GTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCCGCACGCACGCGCGCCTGCGTGCGGGGATGCGCGCGAGTGTGTGCGTGCTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR CCA 90 bp CACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTaGCTTTCCCGCTGCTTTCAGGCTAGCAGCCGGGAGGCACTGGAG +
Preference number: 1 (lower is better)
Translates to: HVHGEARARPLRLRG*LSRCFQASSREALE
Trigger: CTCCAGTGCCTCCCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR TCA 90 bp GTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTaGACAAAGCGGGCTAGACGCCACCTTTCCGCCCCCACGCCTTGG +
Preference number: 1 (lower is better)
Translates to: VLGAARRPLDQGDPN*TKRARRHLSAPTPW
Trigger: CCAAGGCGTGGGGGCGGAAAGGTGGCGTCTAGCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR GCA 90 bp TGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTaGAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATC +
Preference number: 1 (lower is better)
Translates to: CLGRARVGWAPPSVP*RSLARPGGPWIKAI
Trigger: GATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR GCA 90 bp GGGGGTAGCGCGGGATACATGGCCTCCACGTCACCCTGCGGTGGCTaGACCATGCTGGCCGTGGACGTCTGCGTGCTGAGCGCCCCTGAA +
Preference number: 1 (lower is better)
Translates to: GGSAGYMASTSPCGG*TMLAVDVCVLSAPE
Trigger: TTCAGGGGCGCTCAGCACGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGCCATGTATCCCGCGCTACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR CCA 90 bp GGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTaGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAAC +
Preference number: 1 (lower is better)
Translates to: GRGLDGLRLQSLAGP*RGPAAPGSRRSELN
Trigger: GTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR CCA 90 bp CCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTaGATCAAGGCGATCCGAACTGAACAAAGCGGGCTAGACGCCACC +
Preference number: 1 (lower is better)
Translates to: PPSVPCRSLARPGGP*IKAIRTEQSGLDAT
Trigger: GGTGGCGTCTAGCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR CCA 90 bp GACGTGGGGGAAACAATGAGGTGTTTGGGTCGGGCGAGGGTTGGATaGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGC +
Preference number: 1 (lower is better)
Translates to: DVGETMRCLGRARVG*APPSVPCRSLARPG
Trigger: GCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCCACGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR CCA 90 bp TTGGGGTACTTGCGGGGCCGGATGGGCTTGAGGGTGAGCGGCGGCTaGGGCAGGCTGCCAAAGCCCGGGTGGATCTGCTTGTCTTTGAAT +
Preference number: 1 (lower is better)
Translates to: LGYLRGRMGLRVSGG*GRLPKPGWICLSLN
Trigger: ATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAGCCTGCCCCAGCCGCCGCTCACCCTCAAGCCCATCCGGCCCCGCAAGTACCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR GCA 90 bp AAACATGATTTCAGAGCGGATGGAAGACCACCTCCTCCAGCCACGTaGGGACCCCCAGCATGGGACATCTCCCAGCGGCTTGGGGACCCG +
Preference number: 1 (lower is better)
Translates to: KHDFRADGRPPPPAT*GPPAWDISQRLGDP
Trigger: CGGGTCCCCAAGCCGCTGGGAGATGTCCCATGCTGGGGGTCCGCACGTGGCTGGAGGAGGTGGTCTTCCATCCGCTCTGAAATCATGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR CCA 90 bp GGCTTGAGGGTGAGCGGCGGCTGGGGCAGGCTGCCAAAGCCCGGGTaGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTA +
Preference number: 1 (lower is better)
Translates to: GLRVSGGWGRLPKPG*ICLSLNALMVSRGV
Trigger: TACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAGCCTGCCCCAGCCGCCGCTCACCCTCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR GCA 90 bp AGGGTGAGCGGCGGCTGGGGCAGGCTGCCAAAGCCCGGGTGGATCTaGTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAGGG +
Preference number: 1 (lower is better)
Translates to: RVSGGWGRLPKPGWI*LSLNALMVSRGVIG
Trigger: CCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAGCCTGCCCCAGCCGCCGCTCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR GCA 90 bp AAGGGGAGTCGAAGGCGAACTTTCCCAAGTAGGTCACGGTCTTGTTaGCGGGGGCTGGCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGT +
Preference number: 1 (lower is better)
Translates to: KGSRRRTFPSRSRSC*RGLAGRSRSKRVPG
Trigger: ACCCGGAACTCTCTTACTCCGGCTCCTTCCAGCCAGCCCCCGGCAACAAGACCGTGACCTACTTGGGAAAGTTCGCCTTCGACTCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR CCA 90 bp CCATGCCCTGGAAGGGCTTGTGCTCCGGAATGGAGCCCATGTCGTTaGGGTGGTGGTAGAGGTTGTAGTCAGGAATCATGGGGAAGAGAT +
Preference number: 1 (lower is better)
Translates to: PCPGRACAPEWSPCR*GGGRGCSQESWGRD
Trigger: ATCTCTTCCCCATGATTCCTGACTACAACCTCTACCACCACCCCAACGACATGGGCTCCATTCCGGAGCACAAGCCCTTCCAGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR CCA 90 bp TGGGACATCTCCCAGCGGCTTGGGGACCCGAGGTGGGGAAGAGTTTaGGGTAAACACAGCCCAGTTCAGCTCAAGAGTCTTAAACACACA +
Preference number: 1 (lower is better)
Translates to: WDISQRLGDPRWGRV*GKHSPVQLKSLKHT
Trigger: TGTGTGTTTAAGACTCTTGAGCTGAACTGGGCTGTGTTTACCCCAAACTCTTCCCCACCTCGGGTCCCCAAGCCGCTGGGAGATGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR CCA 90 bp AGCCCATGTCGTTGGGGTGGTGGTAGAGGTTGTAGTCAGGAATCATaGGGAAGAGATTGCTGTCCAACGCCGGCTTGGCCGATTGGTAAT +
Preference number: 1 (lower is better)
Translates to: SPCRWGGGRGCSQES*GRDCCPTPAWPIGN
Trigger: ATTACCAATCGGCCAAGCCGGCGTTGGACAGCAATCTCTTCCCCATGATTCCTGACTACAACCTCTACCACCACCCCAACGACATGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR GCA 90 bp GTAAACACAGCCCAGTTCAGCTCAAGAGTCTTAAACACACACGCTTaGGCGCGCGCACACACACACACTCACACACACACATACACACAC +
Preference number: 1 (lower is better)
Translates to: VNTAQFSSRVLNTHA*ARAHTHTHTHTYTH
Trigger: GTGTGTGTATGTGTGTGTGTGAGTGTGTGTGTGTGCGCGCGCGCAAGCGTGTGTGTTTAAGACTCTTGAGCTGAACTGGGCTGTGTTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR CCA 90 bp AAGCTGTATACGCCTACAAATTCTCTTTATTCCGGTGCACTGCACTaGATAACCAAGTACCTTAGAGATTTTATTTTGCTAGGAATACAT +
Preference number: 1 (lower is better)
Translates to: KLYTPTNSLYSGALH*ITKYLRDFILLGIH
Trigger: ATGTATTCCTAGCAAAATAAAATCTCTAAGGTACTTGGTTATCCAGTGCAGTGCACCGGAATAAAGAGAATTTGTAGGCGTATACAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR-3UTR TCA 90 bp CGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGGACCGCTGGCCGGCGTaGAAGGTTGGGAACCGGGGG +
Preference number: 2 (lower is better)
Translates to: RARVGWAPPSVPCRSLARDRWPA*KVGNRG
Trigger: CCCCCGGTTCCCAACCTTTCACGCCGGCCAGCGGTC...CCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR CAA 90 bp CGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTaGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAA +
Preference number: 2 (lower is better)
Translates to: RARVGWAPPSVPCRS*ARPGGPWIKAIRTE
Trigger: TTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR CAA 90 bp GTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTaGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGAT +
Preference number: 2 (lower is better)
Translates to: VFGSGEGWMGSAFSP*QVLGAARRPLDQGD
Trigger: ATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR-3UTR CCA 90 bp TGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCGCCCCTACGCCTCCGTaGCTGGCTTTCCCGCTGCTT +
Preference number: 2 (lower is better)
Translates to: WRGPAAPGSRRSELNKAGAPTPP*LAFPLL
Trigger: AAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGC...GCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR-3UTR TCA 90 bp AGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCAGCCCTGGCCCCTaGCCGCTGGCCGGCGTGAAA +
Preference number: 2 (lower is better)
Translates to: RCLGRARVGWAPPSVPCRSSPGP*PLAGVK
Trigger: TTTCACGCCGGCCAGCGGTCAGGGGCCAGGGCTGGA...CCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR-3UTR CCA 90 bp GGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGGCCGGCGTGAAAGGTTaGGAACCGGGGGCATCGAAG +
Preference number: 2 (lower is better)
Translates to: GRARVGWAPPSVPCRSLAAGVKG*EPGASK
Trigger: CTTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGC...CGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR-3UTR CCA 90 bp GGATGGAAGACCACCTCCTCCAGCCACGTGCGGACCCCCAGCATGGGACATCTCTCCGCCCCCACGCCTTaGCTAAGTGGGGGACCGCGA +
Preference number: 2 (lower is better)
Translates to: GWKTTSSSHVRTPSMGHLSAPTP*LSGGPR
Trigger: TCGCGGTCCCCCACTTAGCCAAGGCGTGGGGGCGGA...GAGATGTCCCATGCTGGGGGTCCGCACGTGGCTGGAGGAGGTGGTCTTCCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR-3UTR TCA 90 bp AATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGTCCAGCCCTGGCCCCTaGCCGCTGGCCGGCGTGAAA +
Preference number: 2 (lower is better)
Translates to: NEVFGSGEGWMGSAFSPLSSPGP*PLAGVK
Trigger: TTTCACGCCGGCCAGCGGTCAGGGGCCAGGGCTGGA...CAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR-3UTR GCA 90 bp CCTGGGGGTCGTGGAAAGACACGGGCTCTGAGTAGAGGTCGCCGCAGTTGGAGTCTGGCCGTGGACGTCTaGGTGCTGAGCGCCCCTGAA +
Preference number: 2 (lower is better)
Translates to: PGGRGKTRALSRGRRSWSLAVDV*VLSAPE
Trigger: TTCAGGGGCGCTCAGCACGCAGACGTCCACGGCCAG...ACTCCAACTGCGGCGACCTCTACTCAGAGCCCGTGTCTTTCCACGACCCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR-3UTR GCA 90 bp CCTGGGGGTCGTGGAAAGACACGGGCTCTGAGTAGAGGTCGCCGCAGTTGGAGTGCCTCCACGTCACCCTaGGGTGGCTGCACCATGCTG +
Preference number: 2 (lower is better)
Translates to: PGGRGKTRALSRGRRSWSASTSP*GGCTML
Trigger: CAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGC...ACTCCAACTGCGGCGACCTCTACTCAGAGCCCGTGTCTTTCCACGACCCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR-3UTR CCA 90 bp TGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCTACGCCTCCGTGGCTaGCTTTCCCGCTGCTTTCAG +
Preference number: 2 (lower is better)
Translates to: WVGRGLDGLRLQSLAGPWLRLRG*LSRCFQ
Trigger: CTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAG...CCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR-3UTR CCA 90 bp GGATGGAAGACCACCTCCTCCAGCCACGTGCGGACCCCCAGCATGGGACATCTCGCCGGCGTGAAAGGTTaGGAACCGGGGGCATCGAAG +
Preference number: 2 (lower is better)
Translates to: GWKTTSSSHVRTPSMGHLAGVKG*EPGASK
Trigger: CTTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGC...GAGATGTCCCATGCTGGGGGTCCGCACGTGGCTGGAGGAGGTGGTCTTCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR-3UTR CCA 90 bp AATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCACGCCTTGGCTAAGTaGGGGACCGCGAGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: NEVFGSGEGWMGSAFSPLHALAK*GTARGR
Trigger: CCTTCCCCTCGCGGTCCCCCACTTAGCCAAGGCGTG...CAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR CAA 90 bp CTTCGAGGGGGTATAGAGGGAGACGTGGGGGAAACAATGAGGTGTTaGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGC +
Preference number: 2 (lower is better)
Translates to: LRGGIEGDVGETMRC*GRARVGWAPPSVPC
Trigger: GCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCCACGTCTCCCTCTATACCCCCTCGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR-3UTR GCA 90 bp AGGCTGCCAAAGCCCGGGTGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCGCGGTGGCTGCACCATaGTGGCCGTGGACGTCTGCG +
Preference number: 2 (lower is better)
Translates to: RLPKPGWICLSLNALMVSAVAAP*WPWTSA
Trigger: CGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGC...GGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR CAA 90 bp GGCAGGCTGCCAAAGCCCGGGTGGATCTGCTTGTCTTTGAATGCCTaGATGGTCTCCAGAGGGGTAATAGGGGGCGGGTTGACCCGGATG +
Preference number: 2 (lower is better)
Translates to: GRLPKPGWICLSLNA*MVSRGVIGGGLTRM
Trigger: CATCCGGGTCAACCCGCCCCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAGCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR-3UTR CCA 90 bp GCAACCTTCCCTATTACTCCACTTCAAAGGAGCCACCCTGTACGAGAAGGGCTGCGGCCCGGCGGCCCCTaGATCAAGGCGATCCGAACT +
Preference number: 2 (lower is better)
Translates to: ATFPITPLQRSHPVREGLRPGGP*IKAIRT
Trigger: AGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCG...CAGCCCTTCTCGTACAGGGTGGCTCCTTTGAAGTGGAGTAATAGGGAAGGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR-3UTR GCA 90 bp AGGCTGCCAAAGCCCGGGTGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCCCCTGGAAGGGCTTGTaGTCCGGAATGGAGCCCATG +
Preference number: 2 (lower is better)
Translates to: RLPKPGWICLSLNALMVSPWKGL*SGMEPM
Trigger: CATGGGCTCCATTCCGGAGCACAAGCCCTTCCAGGG...GGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR-3UTR CCA 90 bp ATGATGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTTCCCAAGCTTGTTGCCGGGGGCTaGCTGGAAGGAGCCGGAGTA +
Preference number: 2 (lower is better)
Translates to: MMLSWHQLEGESKANFPKLVAGG*LEGAGV
Trigger: TACTCCGGCTCCTTCCAGCCAGCCCCCGGCAACAAG...CTTGGGAAAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR-3UTR CCA 90 bp CCTGGGGGTCGTGGAAAGACACGGGCTCTGAGTAGAGGTCGCCGCAGTTGGAGTCTAATGATGTTGTCCTaGCACCAGTTGGAAGGGGAG +
Preference number: 2 (lower is better)
Translates to: PGGRGKTRALSRGRRSWSLMMLS*HQLEGE
Trigger: CTCCCCTTCCAACTGGTGCCAGGACAACATCATTAG...ACTCCAACTGCGGCGACCTCTACTCAGAGCCCGTGTCTTTCCACGACCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR-3UTR CCA 90 bp ACCCCCAAGATGCCGGCGCTCATGAGGCTAATGATGTTGTCCTGGCACCAGTTGAAGAGAGTTCCGGGTTaGGCTTCTCGTTGGTCAGAC +
Preference number: 2 (lower is better)
Translates to: TPKMPALMRLMMLSWHQLKRVPG*ASRWSD
Trigger: GTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTT...CAACTGGTGCCAGGACAACATCATTAGCCTCATGAGCGCCGGCATCTTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR-3UTR CCA 90 bp TGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAGGGGGCTTGCCCTGGGGGTCGTaGAAAGACACGGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: WICLSLNALMVSRGVIGGLPWGS*KDTGSE
Trigger: CTCAGAGCCCGTGTCTTTCCACGACCCCCAGGGCAA...GCCCCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR-3UTR TCA 90 bp CGTTGGGGTGGTGGTAGAGGTTGTAGTCAGGAATCATGGGGAAGAGATTGCTGTGAAAGACACGGGCTCTaGGTAGAGGTCGCCGCAGTT +
Preference number: 2 (lower is better)
Translates to: RWGGGRGCSQESWGRDCCERHGL*VEVAAV
Trigger: AACTGCGGCGACCTCTACTCAGAGCCCGTGTCTTTC...ACAGCAATCTCTTCCCCATGATTCCTGACTACAACCTCTACCACCACCCCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR-3UTR CCA 90 bp TTCTCTCTCCTTCTACAAAAAGTCCAAGTACCTGGAAATTCACAACCCCCTGCTGGCTGGCAGGACAGCTaGGGAAGAGGGGTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: FSLLLQKVQVPGNSQPPAGWQDS*GRGVPE
Trigger: CTCAGGCACCCCTCTTCCCCAGCTGTCCTGCCAGCC...AGCAGGGGGTTGTGAATTTCCAGGTACTTGGACTTTTTGTAGAAGGAGAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR CAA 90 bp GGTAAACACAGCCCAGTTCAGCTCAAGAGTCTTAAACACACACGCTaGCGCGCGCGCACACACACACACTCACACACACACATACACACA +
Preference number: 2 (lower is better)
Translates to: GKHSPVQLKSLKHTR*RARTHTHSHTHIHT
Trigger: TGTGTGTATGTGTGTGTGTGAGTGTGTGTGTGTGCGCGCGCGCAAGCGTGTGTGTTTAAGACTCTTGAGCTGAACTGGGCTGTGTTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR-3UTR CCA 90 bp TTCTCTCTCCTTCTACAAAAAGTCCAAGTACCTGGAAATTCACAACCCCCTGCTCTACGCCTCCGTGGCTaGCTTTCCCGCTGCTTTCAG +
Preference number: 2 (lower is better)
Translates to: FSLLLQKVQVPGNSQPPALRLRG*LSRCFQ
Trigger: CTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAG...AGCAGGGGGTTGTGAATTTCCAGGTACTTGGACTTTTTGTAGAAGGAGAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR-3UTR CCA 90 bp CTGTATACGCCTACAAATTCTCTTTATTCCGGTGCACTGCACTGGATAACCAAGAGGCAGGCTCAGCGATaGCTGCTCTTTCTCCCCACA +
Preference number: 2 (lower is better)
Translates to: LYTPTNSLYSGALHWITKRQAQR*LLFLPT
Trigger: TGTGGGGAGAAAGAGCAGCCATCGCTGAGCCTGCCT...CTTGGTTATCCAGTGCAGTGCACCGGAATAAAGAGAATTTGTAGGCGTATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR-3UTR GCA 90 bp CTGTATACGCCTACAAATTCTCTTTATTCCGGTGCACTGCACTGGATAACCAAGAGGCTCAGCGATGGCTaGTCTTTCTCCCCACAGATC +
Preference number: 2 (lower is better)
Translates to: LYTPTNSLYSGALHWITKRLSDG*SFSPQI
Trigger: GATCTGTGGGGAGAAAGAGCAGCCATCGCTGAGCCT...CTTGGTTATCCAGTGCAGTGCACCGGAATAAAGAGAATTTGTAGGCGTATACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR-3UTR CCA 90 bp AGGAACAGTACATTCAGTCAAGACCATGCTGCAAGCTGTGGCAGAGAGCAACCTTCCGGTGCACTGCACTaGATAACCAAGTACCTTAGA +
Preference number: 2 (lower is better)
Translates to: RNSTFSQDHAASCGREQPSGALH*ITKYLR
Trigger: TCTAAGGTACTTGGTTATCCAGTGCAGTGCACCGGA...AGGTTGCTCTCTGCCACAGCTTGCAGCATGGTCTTGACTGAATGTACTGTTCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR GCA 72 bp CCCTGCGGTGGCTGCACCATGCTGGCCGTGGACGTCTaGGTGCTGAGCGCCCCTGAAGCCGGGGGCACCCCC +
Preference number: 3 (lower is better)
Translates to: PCGGCTMLAVDV*VLSAPEAGGTP
Trigger: GGGGGTGCCCCCGGCTTCAGGGGCGCTCAGCACGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR GCA 72 bp CGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTaGAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATC +
Preference number: 3 (lower is better)
Translates to: RARVGWAPPSVP*RSLARPGGPWI
Trigger: GATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR GCA 72 bp CACACACTCGCGCGCATCCCCGCACGCAGGCGCGCGTaGGTGCGGCGGGCAGCAAGCTCTGCGCTTTGGTGC +
Preference number: 3 (lower is better)
Translates to: HTLARIPARRRA*VRRAASSALWC
Trigger: GCACCAAAGCGCAGAGCTTGCTGCCCGCCGCACGCACGCGCGCCTGCGTGCGGGGATGCGCGCGAGTGTGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR CCA 72 bp GGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTaGCTTTCCCGCTGCTTTCAGGCTAGCAGCCGGGAG +
Preference number: 3 (lower is better)
Translates to: GEARARPLRLRG*LSRCFQASSRE
Trigger: CTCCCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR-3UTR CAA 90 bp CCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGGGCCGGCGTGAAAGGTaGGGAACCGGGGGCATCGAA +
Preference number: 3 (lower is better)
Translates to: PSVPCRSLARPGGPWIKAGRRER*GTGGIE
Trigger: TTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGCC...CGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR TCA 72 bp GCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTaGACAAAGCGGGCTAGACGCCACCTTTCCGCCCCC +
Preference number: 3 (lower is better)
Translates to: AARRPLDQGDPN*TKRARRHLSAP
Trigger: GGGGGCGGAAAGGTGGCGTCTAGCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR GCA 72 bp GGGGGTAGCGCGGGATACATGGCCTCCACGTCACCCTaGGGTGGCTGCACCATGCTGGCCGTGGACGTCTGC +
Preference number: 3 (lower is better)
Translates to: GGSAGYMASTSP*GGCTMLAVDVC
Trigger: GCAGACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGCCATGTATCCCGCGCTACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR CCA 72 bp TTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTaGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCC +
Preference number: 3 (lower is better)
Translates to: LDGLRLQSLAGP*RGPAAPGSRRS
Trigger: GGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR GCA 72 bp GCGGGATACATGGCCTCCACGTCACCCTGCGGTGGCTaGACCATGCTGGCCGTGGACGTCTGCGTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: AGYMASTSPCGG*TMLAVDVCVLS
Trigger: GCTCAGCACGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGCCATGTATCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR-3UTR CAA 90 bp GGGGGAAACAATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCTTCCGCCCCCACGCCTaGGCTAAGTGGGGGACCGCG +
Preference number: 3 (lower is better)
Translates to: GGNNEVFGSGEGWMGSAFFRPHA*AKWGTA
Trigger: CGCGGTCCCCCACTTAGCCAAGGCGTGGGGGCGGAA...GAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR CCA 72 bp GTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTaGATCAAGGCGATCCGAACTGAACAAAGCGGGCTA +
Preference number: 3 (lower is better)
Translates to: VPCRSLARPGGP*IKAIRTEQSGL
Trigger: TAGCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR-3UTR CAA 90 bp AGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGGGCCGGCGTGAAAGGTaGGGAACCGGGGGCATCGAA +
Preference number: 3 (lower is better)
Translates to: RCLGRARVGWAPPSVPCRGRRER*GTGGIE
Trigger: TTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGCC...CCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR CCA 72 bp ATAGGGGGCGGGTTGACCCGGATGGGGTCCATGCCCTaGAAGGGCTTGTGCTCCGGAATGGAGCCCATGTCG +
Preference number: 3 (lower is better)
Translates to: IGGGLTRMGSMP*KGLCSGMEPMS
Trigger: CGACATGGGCTCCATTCCGGAGCACAAGCCCTTCCAGGGCATGGACCCCATCCGGGTCAACCCGCCCCCTAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR GCA 72 bp TTCAGAGCGGATGGAAGACCACCTCCTCCAGCCACGTaGGGACCCCCAGCATGGGACATCTCCCAGCGGCTT +
Preference number: 3 (lower is better)
Translates to: FRADGRPPPPAT*GPPAWDISQRL
Trigger: AAGCCGCTGGGAGATGTCCCATGCTGGGGGTCCGCACGTGGCTGGAGGAGGTGGTCTTCCATCCGCTCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR GCA 72 bp TTGACCCGGATGGGGTCCATGCCCTGGAAGGGCTTGTaGTCCGGAATGGAGCCCATGTCGTTGGGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: LTRMGSMPWKGL*SGMEPMSLGWW
Trigger: CCACCACCCCAACGACATGGGCTCCATTCCGGAGCACAAGCCCTTCCAGGGCATGGACCCCATCCGGGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR GCA 72 bp GGCGGCTGGGGCAGGCTGCCAAAGCCCGGGTGGATCTaGTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGG +
Preference number: 3 (lower is better)
Translates to: GGWGRLPKPGWI*LSLNALMVSRG
Trigger: CCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAGCCTGCCCCAGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR CCA 72 bp GAAACAATGAGGTGTTTGGGTCGGGCGAGGGTTGGATaGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCG +
Preference number: 3 (lower is better)
Translates to: ETMRCLGRARVG*APPSVPCRSLA
Trigger: CGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR CCA 72 bp GGGGGAAACAATGAGGTGTTTGGGTCGGGCGAGGGTTaGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTT +
Preference number: 3 (lower is better)
Translates to: GGNNEVFGSGEG*MGSAFSPLQVL
Trigger: AAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR CCA 72 bp GCATGGGACATCTCCCAGCGGCTTGGGGACCCGAGGTaGGGAAGAGTTTGGGGTAAACACAGCCCAGTTCAG +
Preference number: 3 (lower is better)
Translates to: AWDISQRLGDPR*GRVWGKHSPVQ
Trigger: CTGAACTGGGCTGTGTTTACCCCAAACTCTTCCCCACCTCGGGTCCCCAAGCCGCTGGGAGATGTCCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR CCA 72 bp CTCCACTTCAAAGGAGCCACCCTGTACGAGAAGGGCTaGCAGGACAGCTGGGGAAGAGGGGTGCCTGAGAAG +
Preference number: 3 (lower is better)
Translates to: LHFKGATLYEKG*QDSWGRGVPEK
Trigger: CTTCTCAGGCACCCCTCTTCCCCAGCTGTCCTGCCAGCCCTTCTCGTACAGGGTGGCTCCTTTGAAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR GCA 72 bp CGAAGGCGAACTTTCCCAAGTAGGTCACGGTCTTGTTaGCGGGGGCTGGCTGGAAGGAGCCGGAGTAAGAGA +
Preference number: 3 (lower is better)
Translates to: RRRTFPSRSRSC*RGLAGRSRSKR
Trigger: TCTCTTACTCCGGCTCCTTCCAGCCAGCCCCCGGCAACAAGACCGTGACCTACTTGGGAAAGTTCGCCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR GCA 72 bp GCTGCCAAAGCCCGGGTGGATCTGCTTGTCTTTGAATaGCTTGATGGTCTCCAGAGGGGTAATAGGGGGCGG +
Preference number: 3 (lower is better)
Translates to: AAKARVDLLVFE*LDGLQRGNRGR
Trigger: CCGCCCCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR CCA 72 bp TCCCAGCGGCTTGGGGACCCGAGGTGGGGAAGAGTTTaGGGTAAACACAGCCCAGTTCAGCTCAAGAGTCTT +
Preference number: 3 (lower is better)
Translates to: SQRLGDPRWGRV*GKHSPVQLKSL
Trigger: AAGACTCTTGAGCTGAACTGGGCTGTGTTTACCCCAAACTCTTCCCCACCTCGGGTCCCCAAGCCGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR CCA 72 bp CGTTGGGGTGGTGGTAGAGGTTGTAGTCAGGAATCATaGGGAAGAGATTGCTGTCCAACGCCGGCTTGGCCG +
Preference number: 3 (lower is better)
Translates to: RWGGGRGCSQES*GRDCCPTPAWP
Trigger: CGGCCAAGCCGGCGTTGGACAGCAATCTCTTCCCCATGATTCCTGACTACAACCTCTACCACCACCCCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR TCA 72 bp GATGGCTGCTCTTTCTCCCCACAGATCAAACTGCCCTaGGGCCTAAGAGGGAAGCGCTCAGAAAAGGAGGGG +
Preference number: 3 (lower is better)
Translates to: DGCSFSPQIKLP*GLRGKRSEKEG
Trigger: CCCCTCCTTTTCTGAGCGCTTCCCTCTTAGGCCTCAGGGCAGTTTGATCTGTGGGGAGAAAGAGCAGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR CCA 72 bp GGAAGGGCTTGTGCTCCGGAATGGAGCCCATGTCGTTaGGGTGGTGGTAGAGGTTGTAGTCAGGAATCATGG +
Preference number: 3 (lower is better)
Translates to: GRACAPEWSPCR*GGGRGCSQESW
Trigger: CCATGATTCCTGACTACAACCTCTACCACCACCCCAACGACATGGGCTCCATTCCGGAGCACAAGCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR CCA 72 bp AAGATGCCGGCGCTCATGAGGCTAATGATGTTGTCCTaGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTT +
Preference number: 3 (lower is better)
Translates to: KMPALMRLMMLS*HQLEGESKANF
Trigger: AAAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACATCATTAGCCTCATGAGCGCCGGCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR-3UTR CAA 90 bp CCCGGGTGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAATCATGGGGAAGAGATaGCTGTCCAACGCCGGCTTG +
Preference number: 3 (lower is better)
Translates to: PGWICLSLNALMVSRGVIIMGKR*LSNAGL
Trigger: CAAGCCGGCGTTGGACAGCAATCTCTTCCCCATGAT...TATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR CCA 72 bp CTTCTTCTCTCTCCTTCTACAAAAAGTCCAAGTACCTaGAAATTCACAACCCCCTGCTCTTCGATATCCCCC +
Preference number: 3 (lower is better)
Translates to: LLLSPSTKSPST*KFTTPCSSISP
Trigger: GGGGGATATCGAAGAGCAGGGGGTTGTGAATTTCCAGGTACTTGGACTTTTTGTAGAAGGAGAGAGAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR TCA 72 bp GTAATTGAGAGAAGACACAAAGCTGGAGTGGCTGGTTaGAGCCTGCCTTTCTGGGAAAAGATTTTGAAAGAG +
Preference number: 3 (lower is better)
Translates to: VIERRHKAGVAG*SLPFWEKILKE
Trigger: CTCTTTCAAAATCTTTTCCCAGAAAGGCAGGCTTCAACCAGCCACTCCAGCTTTGTGTCTTCTCTCAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR CCA 72 bp ACGCCTACAAATTCTCTTTATTCCGGTGCACTGCACTaGATAACCAAGTACCTTAGAGATTTTATTTTGCTA +
Preference number: 3 (lower is better)
Translates to: TPTNSLYSGALH*ITKYLRDFILL
Trigger: TAGCAAAATAAAATCTCTAAGGTACTTGGTTATCCAGTGCAGTGCACCGGAATAAAGAGAATTTGTAGGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp CGCACACACTCGCGCGCATCCCCGCACGCAGGCGCGCGTGCGTGCGGCGGGCAGCCTCCTCCAGCCACGTaGGGACCCCCAGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: RTHSRASPHAGARACGGQPPPAT*GPPAWD
Trigger: GTCCCATGCTGGGGGTCCGCACGTGGCTGGAGGAGG...CTGCCCGCCGCACGCACGCGCGCCTGCGTGCGGGGATGCGCGCGAGTGTGTGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp CGCACACACTCGCGCGCATCCCCGCACGCAGGCGCGCGTGCGTGCGGCGGGCAGTCCGCCCCCACGCCTTaGCTAAGTGGGGGACCGCGA +
Preference number: 4 (lower is better)
Translates to: RTHSRASPHAGARACGGQSAPTP*LSGGPR
Trigger: TCGCGGTCCCCCACTTAGCCAAGGCGTGGGGGCGGA...CTGCCCGCCGCACGCACGCGCGCCTGCGTGCGGGGATGCGCGCGAGTGTGTGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp GGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGCTCCCTTGCAGGTCCTTaGCGCGGCCCGGCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GQGAAPTPPWLAFPLLSGSLAGP*RGPAAP
Trigger: AGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGA...GCCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR TCA 90 bp CGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGTCCAGCCCTGGCCCCTaGCCGCTGGCCGGCGTGAAA +
Preference number: 4 (lower is better)
Translates to: RPWRGQGAAPTPPWLAFPSSPGP*PLAGVK
Trigger: TTTCACGCCGGCCAGCGGTCAGGGGCCAGGGCTGGA...CGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCAGGTCACGGTCTTGTTaGCGGGGGCTGGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GRTSMERPGRGPYASVAGRSRSC*RGLAGR
Trigger: CCTTCCAGCCAGCCCCCGGCAACAAGACCGTGACCT...GCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp CGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGGCTTGCGCTCGTCGCTaGGCGCAAACTTGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: RPWRGQGAAPTPPWLAFPACARR*AQTCAR
Trigger: GCGGGCGCAAGTTTGCGCGCAGCGACGAGCGCAAGC...CGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCGTAGCGCGGGATACATaGCCTCCACGTCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: GRTSMERPGRGPYASVAGVARDT*PPRHPA
Trigger: CGCAGGGTGACGTGGAGGCCATGTATCCCGCGCTAC...GCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp TGGCCCCTGACCGCTGGCCGGCGTGAAAGGTTGGGAACCGGGGGCATCGAAGGGTCGGCCGGGCACGCGTaGGGCCGTTCGTGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: WPLTAGRRERLGTGGIEGSAGHA*GRSWSG
Trigger: ACCGCTCCACGAACGGCCCCACGCGTGCCCGGCCGA...CCCTTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGCCAGCGGTCAGGGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GGCCTCCACGTCACCCTGCGGTGGCTGCACCATGCTGGCCGTGGACGTCTGCGTTCGGCCGGGCACGCGTaGGGCCGTTCGTGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: GLHVTLRWLHHAGRGRLRSAGHA*GRSWSG
Trigger: ACCGCTCCACGAACGGCCCCACGCGTGCCCGGCCGA...ACGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp TGGCCCCTGACCGCTGGCCGGCGTGAAAGGTTGGGAACCGGGGGCATCGAAGGGTCCCTTGCAGGTCCTTaGCGCGGCCCGGCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: WPLTAGRRERLGTGGIEGSLAGP*RGPAAP
Trigger: AGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGA...CCCTTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGCCAGCGGTCAGGGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR CAA 72 bp TCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTaGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SGEGWMGSAFSP*QVLGAARRPLD
Trigger: ATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR TCA 90 bp GGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGGCTCGTCCGAACGGCTaGAACGGCGGTCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GWMGSAFSPLQVLGAARRARPNG*NGGRSP
Trigger: AGGGCTGCGACCGCCGTTTCAGCCGTTCGGACGAGC...CCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR TCA 90 bp CGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGTCCAGCCCTGGCCCCTaGCCGCTGGCCGGCGTGAAA +
Preference number: 4 (lower is better)
Translates to: RARVGWAPPSVPCRSLARSSPGP*PLAGVK
Trigger: TTTCACGCCGGCCAGCGGTCAGGGGCCAGGGCTGGA...CCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGCGGTGGCTGCACCATaGTGGCCGTGGACGTCTGCG +
Preference number: 4 (lower is better)
Translates to: EARARPLRLRGWLSRCFQAVAAP*WPWTSA
Trigger: CGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGC...CTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGCGCCTCCACGTCACCCTaGGGTGGCTGCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: GQGAAPTPPWLAFPLLSGASTSP*GGCTML
Trigger: CAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGC...GCCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGCAGGCGAGCCCGGGATTaGCCTGGGGGTCGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GQGAAPTPPWLAFPLLSGRRARD*PGGRGK
Trigger: CTTTCCACGACCCCCAGGGCAATCCCGGGCTCGCCT...GCCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCCCCTGGAAGGGCTTGTaGTCCGGAATGGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: GRTSMERPGRGPYASVAGPWKGL*SGMEPM
Trigger: CATGGGCTCCATTCCGGAGCACAAGCCCTTCCAGGG...GCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp TGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTGCGGCTGGGGCAGGCTaGCAAAGCCCGGGTGGATCT +
Preference number: 4 (lower is better)
Translates to: WRGQGAAPTPPWLAFPLLAAGAG*QSPGGS
Trigger: AGATCCACCCGGGCTTTGGCAGCCTGCCCCAGCCGC...AAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GAAGCAAGGGGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCTCTTGGCGTGGCGCTTaGGCTCGTCGCTGCGCGCAA +
Preference number: 4 (lower is better)
Translates to: EARGRTSMERPGRGPYASSWRGA*ARRCAQ
Trigger: TTGCGCGCAGCGACGAGCGCAAGCGCCACGCCAAGA...GGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCCCCTTGCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GAAGCAAGGGGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGCACCATGCTaGCCGTGGACGTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: EARGRTSMERPGRGPYASVAAPC*PWTSAC
Trigger: GCACGCAGACGTCCACGGCCAGCATGGTGCAGCCAC...GGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCCCCTTGCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR TCA 90 bp GGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCTCAGGCGCAGGTGGTaGCCACGGGGGCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: GRARVGWAPPSVPCRSLALRRRW*PRGPAT
Trigger: TGTCGCTGGCCCCCGTGGTCACCACCTGCGCCTGAG...CGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp TTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCTCACCCTGCGGTGGCTaGACCATGCTGGCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: LDGLRLQSLAGPWRGPAASPCGG*TMLAVD
Trigger: GTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGA...GGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp AGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGAGGCGAGCCCGGGATTaGCCTGGGGGTCGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RPGRGPYASVAGFPAAFRRRARD*PGGRGK
Trigger: CTTTCCACGACCCCCAGGGCAATCCCGGGCTCGCCT...CCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGCGCTGCGCGCAAACTTaGGCCCGCAGAACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: EARARPLRLRGWLSRCFQRCAQT*ARRTRR
Trigger: CCTGCGAGTTCTGCGGGCGCAAGTTTGCGCGCAGCG...CTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp TGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCTTGGCGTGGCGCTTaGGCTCGTCGCTGCGCGCAA +
Preference number: 4 (lower is better)
Translates to: WRGQGAAPTPPWLAFPLLSWRGA*ARRCAQ
Trigger: TTGCGCGCAGCGACGAGCGCAAGCGCCACGCCAAGA...AAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp CGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTTGTTGCCGGGGGCTaGCTGGAAGGAGCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: RPWRGQGAAPTPPWLAFPLVAGG*LEGAGV
Trigger: TACTCCGGCTCCTTCCAGCCAGCCCCCGGCAACAAG...CGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp CCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGGTGGCTGCACCATGCTaGCCGTGGACGTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: PSVPCRSLARPGGPWIKAVAAPC*PWTSAC
Trigger: GCACGCAGACGTCCACGGCCAGCATGGTGCAGCCAC...CGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCGCTTGTGCTCCGGAATaGAGCCCATGTCGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GRTSMERPGRGPYASVAGACAPE*SPCRWG
Trigger: ACCCCAACGACATGGGCTCCATTCCGGAGCACAAGC...GCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp TGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTGCCCCTACGCCTCCGTaGCTGGCTTTCCCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: WRGQGAAPTPPWLAFPLLAPTPP*LAFPLL
Trigger: AAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGC...AAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp CGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGGCCGGCGTGAAAGGTTaGGAACCGGGGGCATCGAAG +
Preference number: 4 (lower is better)
Translates to: RPWRGQGAAPTPPWLAFPAGVKG*EPGASK
Trigger: CTTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGC...CGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp TGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTCACGCCTTGGCTAAGTaGGGGACCGCGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WRGQGAAPTPPWLAFPLLHALAK*GTARGR
Trigger: CCTTCCCCTCGCGGTCCCCCACTTAGCCAAGGCGTG...AAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp AGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGCTAGCCGGCCCGGCGGCCCCTaGATCAAGGCGATCCGAACT +
Preference number: 4 (lower is better)
Translates to: RARPLRLRGWLSRCFQASRPGGP*IKAIRT
Trigger: AGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCG...GCTAGCCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCAGGCAGGCTCAGCGATaGCTGCTCTTTCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: GRTSMERPGRGPYASVAGRQAQR*LLFLPT
Trigger: TGTGGGGAGAAAGAGCAGCCATCGCTGAGCCTGCCT...GCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR TCA 90 bp GCCGGGGGCTGGCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCTGGACGTCTGCGTGCTaGGCGCCCCTGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: AGGWLEGAGVREFRVGLLWTSAC*APLKPG
Trigger: CCCCGGCTTCAGGGGCGCTCAGCACGCAGACGTCCA...GAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGCCAGCCCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR TCA 90 bp AGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAGACCGCTGGCCGGCGTaGAAGGTTGGGAACCGGGGG +
Preference number: 4 (lower is better)
Translates to: RSLARPGGPWIKAIRTEQDRWPA*KVGNRG
Trigger: CCCCCGGTTCCCAACCTTTCACGCCGGCCAGCGGTC...TTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp CCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGCCTCCACGTCACCCTaGGGTGGCTGCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: PCRSLARPGGPWIKAIRTASTSP*GGCTML
Trigger: CAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGC...AGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GAAGCAAGGGGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCCCCTGGAAGGGCTTGTaGTCCGGAATGGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: EARGRTSMERPGRGPYASPWKGL*SGMEPM
Trigger: CATGGGCTCCATTCCGGAGCACAAGCCCTTCCAGGG...GGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCCCCTTGCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GGCCTCCACGTCACCCTGCGGTGGCTGCACCATGCTGGCCGTGGACGTCTGCGTTCTTGGCGTGGCGCTTaGGCTCGTCGCTGCGCGCAA +
Preference number: 4 (lower is better)
Translates to: GLHVTLRWLHHAGRGRLRSWRGA*ARRCAQ
Trigger: TTGCGCGCAGCGACGAGCGCAAGCGCCACGCCAAGA...ACGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp GAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGCGAGGATGCAGAGGGTaGACCGCCCTTCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: EARARPLRLRGWLSRCFQRGCRG*TALLRL
Trigger: AAGGCGGAGAAGGGCGGTGCACCCTCTGCATCCTCG...CTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAGGCTGGCTTTCCCGCTaGTTTCAGGCTAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: VPCRSLARPGGPWIKAIRGWLSR*FQASSR
Trigger: CCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCCAGCC...TCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGAGCTCTGCGCTTTGGTaGGCTCCTTACCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GWMGSAFSPLQVLGAARRSSALW*APYPLP
Trigger: GGGGAGGGGGTAAGGAGCGCACCAAAGCGCAGAGCT...CCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp CCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGGTAGCGCGGGATACATaGCCTCCACGTCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: PSVPCRSLARPGGPWIKAVARDT*PPRHPA
Trigger: CGCAGGGTGACGTGGAGGCCATGTATCCCGCGCTAC...CGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGAGCCCGGGATTGCCCTaGGGGTCGTGGAAAGACACG +
Preference number: 4 (lower is better)
Translates to: EARARPLRLRGWLSRCFQSPGLP*GSWKDT
Trigger: CGTGTCTTTCCACGACCCCCAGGGCAATCCCGGGCT...CTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GCCCGGGATTGCCCTGGGGGTCGTGGAAAGACACGGGCTCTGAGTAGAGGTCGCAGGGTGAGCGGCGGCTaGGGCAGGCTGCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: ARDCPGGRGKTRALSRGRRVSGG*GRLPKP
Trigger: GGGCTTTGGCAGCCTGCCCCAGCCGCCGCTCACCCT...GCGACCTCTACTCAGAGCCCGTGTCTTTCCACGACCCCCAGGGCAATCCCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp CGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCTAGACAGGGTGAGCGGCGGCTaGGGCAGGCTGCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: RPGGPWIKAIRTEQSGLDRVSGG*GRLPKP
Trigger: GGGCTTTGGCAGCCTGCCCCAGCCGCCGCTCACCCT...GTCTAGCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp ACAAAGCGGGCTAGACGCCACCTTTCCGCCCCCACGCCTTGGCTAAGTGGGGGATCGGCCGGGCACGCGTaGGGCCGTTCGTGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: TKRARRHLSAPTPWLSGGSAGHA*GRSWSG
Trigger: ACCGCTCCACGAACGGCCCCACGCGTGCCCGGCCGA...TCCCCCACTTAGCCAAGGCGTGGGGGCGGAAAGGTGGCGTCTAGCCCGCTTTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp CTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGCGGGCGAGGGTTGGATaGGCTCCGCCTTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LAGPWRGPAAPGSRRSELRARVG*APPSVP
Trigger: AGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCG...CAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp TGGCCCCTGACCGCTGGCCGGCGTGAAAGGTTGGGAACCGGGGGCATCGAAGGGGGGTCGGGCGAGGGTTaGATGGGCTCCGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: WPLTAGRRERLGTGGIEGGSGEG*MGSAFS
Trigger: ACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCC...CCCTTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGCCAGCGGTCAGGGGCCA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp CCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGTGGCTCCATCCCGGGTaGGAGGCTGAGGGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: PSVPCRSLARPGGPWIKAWLHPG*EAEGVR
Trigger: CCTTACTCCCTCAGCCTCCCACCCGGGATGGAGCCA...CGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522910.1
3UTR CAA 72 bp GTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTaGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATC +
Preference number: 4 (lower is better)
Translates to: VGWAPPSVPCRS*ARPGGPWIKAI
Trigger: GATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR TCA 90 bp TGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCTGCCGGAGAAGAGGTTaGGCGCGCTGGGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: WRGPAAPGSRRSELNKAGCRRRG*ARWGSP
Trigger: AGGAGATCCCCAGCGCGCTCAACCTCTTCTCCGGCA...GCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR TCA 90 bp GGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGCACGTGGGGGAAACAATaGGGTGTTTGGGTCGGGCGA +
Preference number: 4 (lower is better)
Translates to: GQGAAPTPPWLAFPLLSGTWGKQ*GVWVGR
Trigger: TCGCCCGACCCAAACACCTCATTGTTTCCCCCACGT...GCCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GGGGGAAACAATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCCGCCTCTGCCGCCGCTaGCGCCGCTGCTACCACCAC +
Preference number: 4 (lower is better)
Translates to: GGNNEVFGSGEGWMGSAFRLCRR*RRCYHH
Trigger: GTGGTGGTAGCAGCGGCGGCAGCGGCGGCAGAGGCG...GAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp TGGCCCCTGACCGCTGGCCGGCGTGAAAGGTTGGGAACCGGGGGCATCGAAGGGAGGTCACGGTCTTGTTaGCGGGGGCTGGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: WPLTAGRRERLGTGGIEGRSRSC*RGLAGR
Trigger: CCTTCCAGCCAGCCCCCGGCAACAAGACCGTGACCT...CCCTTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGCCAGCGGTCAGGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GCCCGGGATTGCCCTGGGGGTCGTGGAAAGACACGGGCTCTGAGTAGAGGTCGCGCGGTGGCTGCACCATaGTGGCCGTGGACGTCTGCG +
Preference number: 4 (lower is better)
Translates to: ARDCPGGRGKTRALSRGRAVAAP*WPWTSA
Trigger: CGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGC...GCGACCTCTACTCAGAGCCCGTGTCTTTCCACGACCCCCAGGGCAATCCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp CGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCTAGACGCGGCTGGGGCAGGCTaGCAAAGCCCGGGTGGATCT +
Preference number: 4 (lower is better)
Translates to: RPGGPWIKAIRTEQSGLDAAGAG*QSPGGS
Trigger: AGATCCACCCGGGCTTTGGCAGCCTGCCCCAGCCGC...GTCTAGCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp TACATGGCCTCCACGTCACCCTGCGGTGGCTGCACCATGCTGGCCGTGGACGTCGCGGCTGGGGCAGGCTaGCAAAGCCCGGGTGGATCT +
Preference number: 4 (lower is better)
Translates to: YMASTSPCGGCTMLAVDVAAGAG*QSPGGS
Trigger: AGATCCACCCGGGCTTTGGCAGCCTGCCCCAGCCGC...GACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGCCATGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp TGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCCGAGGATGCAGAGGGTaGACCGCCCTTCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: WRGPAAPGSRRSELNKAGRGCRG*TALLRL
Trigger: AAGGCGGAGAAGGGCGGTGCACCCTCTGCATCCTCG...GCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGGCGGGCAGCAAGCTCTaGGCTTTGGTGCGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: GWMGSAFSPLQVLGAARRAGSKL*ALVRSL
Trigger: TAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGC...CCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp GGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGCGCTGGGGAAGAGGGGTaGCTGAGAAGAGGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: GQGAAPTPPWLAFPLLSGAGEEG*LRRGEV
Trigger: TACCTCACCTCTTCTCAGGCACCCCTCTTCCCCAGC...GCCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp TGGCCCCTGACCGCTGGCCGGCGTGAAAGGTTGGGAACCGGGGGCATCGAAGGGCTTGTTGCCGGGGGCTaGCTGGAAGGAGCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: WPLTAGRRERLGTGGIEGLVAGG*LEGAGV
Trigger: TACTCCGGCTCCTTCCAGCCAGCCCCCGGCAACAAG...CCCTTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGCCAGCGGTCAGGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GAAGCAAGGGGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCTGTCCTGGCACCAGTTaGAAGGGGAGTCGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: EARGRTSMERPGRGPYASCPGTS*KGSRRR
Trigger: TCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACA...GGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCCCCTTGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GGCCTCCACGTCACCCTGCGGTGGCTGCACCATGCTGGCCGTGGACGTCTGCGTGTAGCGCGGGATACATaGCCTCCACGTCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: GLHVTLRWLHHAGRGRLRVARDT*PPRHPA
Trigger: CGCAGGGTGACGTGGAGGCCATGTATCCCGCGCTAC...ACGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp CCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGTTGCCCTGGGGGTCGTaGAAAGACACGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PSVPCRSLARPGGPWIKALPWGS*KDTGSE
Trigger: CTCAGAGCCCGTGTCTTTCCACGACCCCCAGGGCAA...CGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp CCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTAGCCCGGGATTGCCCTaGGGGTCGTGGAAAGACACG +
Preference number: 4 (lower is better)
Translates to: PCRSLARPGGPWIKAIRTSPGLP*GSWKDT
Trigger: CGTGTCTTTCCACGACCCCCAGGGCAATCCCGGGCT...AGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAATGGGGTCCATGCCCTaGAAGGGCTTGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: VPCRSLARPGGPWIKAIRMGSMP*KGLCSG
Trigger: TCCGGAGCACAAGCCCTTCCAGGGCATGGACCCCAT...TCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp CCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGCTACGCCTCCGTGGCTaGCTTTCCCGCTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: PSVPCRSLARPGGPWIKALRLRG*LSRCFQ
Trigger: CTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAG...CGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR TCA 90 bp TTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCAGATCAAACTGCCCTaGGGCCTAAGAGGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LDGLRLQSLAGPWRGPAAQIKLP*GLRGKR
Trigger: GCGCTTCCCTCTTAGGCCTCAGGGCAGTTTGATCTG...GGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp CGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCTAGACCTGGCCGTGGACGTCTaGGTGCTGAGCGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: RPGGPWIKAIRTEQSGLDLAVDV*VLSAPE
Trigger: TTCAGGGGCGCTCAGCACGCAGACGTCCACGGCCAG...GTCTAGCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GCCCGGGATTGCCCTGGGGGTCGTGGAAAGACACGGGCTCTGAGTAGAGGTCGCCGCTGCGCGCAAACTTaGGCCCGCAGAACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: ARDCPGGRGKTRALSRGRRCAQT*ARRTRR
Trigger: CCTGCGAGTTCTGCGGGCGCAAGTTTGCGCGCAGCG...GCGACCTCTACTCAGAGCCCGTGTCTTTCCACGACCCCCAGGGCAATCCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp AGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGCCGCCTTCAGTCCCTTaGAGGTCCTTGGCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RCLGRARVGWAPPSVPCRPPSVP*RSLARP
Trigger: GGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGG...CCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCGGTTGGGCTTCTCGTTaGTCAGACCGATGTCCATTA +
Preference number: 4 (lower is better)
Translates to: GRTSMERPGRGPYASVAGGWASR*SDRCPL
Trigger: TAATGGACATCGGTCTGACCAACGAGAAGCCCAACC...GCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GCATCGAAGGGGAAGCAAGGGGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCTGTCCAACGCCGGCTTaGCCGATTGGTAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: ASKGKQGAARPWRGQGAACPTPA*PIGNPG
Trigger: CCCAGGATTACCAATCGGCCAAGCCGGCGTTGGACA...GGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCCCCTTGCTTCCCCTTCGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCCCCTACGCCTCCGTaGCTGGCTTTCCCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GPWRGPAAPGSRRSELNKAPTPP*LAFPLL
Trigger: AAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGC...TTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAACACGCCTTGGCTAAGTaGGGGACCGCGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GPWRGPAAPGSRRSELNKHALAK*GTARGR
Trigger: CCTTCCCCTCGCGGTCCCCCACTTAGCCAAGGCGTG...TTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAAGAGGTGAGGTAGGGTaGGGAGAAGGTGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: VPCRSLARPGGPWIKAIRRGEVG*GEGETG
Trigger: CCCAGTCTCACCTTCTCCCCACCCTACCTCACCTCT...TCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp GGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGGCTGGCAGGACAGCTaGGGAAGAGGGGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GPWRGPAAPGSRRSELNKGWQDS*GRGVPE
Trigger: CTCAGGCACCCCTCTTCCCCAGCTGTCCTGCCAGCC...TTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp GAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGCTGTACGAGAAGGGCTaGCAGGACAGCTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: EARARPLRLRGWLSRCFQLYEKG*QDSWGR
Trigger: TCTTCCCCAGCTGTCCTGCCAGCCCTTCTCGTACAG...CTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR TCA 90 bp AGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGCTAGCGCTGGAGTGGCTGGTTaGAGCCTGCCTTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RARPLRLRGWLSRCFQASAGVAG*SLPFWE
Trigger: TTCCCAGAAAGGCAGGCTTCAACCAGCCACTCCAGC...GCTAGCCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp TTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGCTGGCCGTGGACGTCTaGGTGCTGAGCGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LGRARVGWAPPSVPCRSLLAVDV*VLSAPE
Trigger: TTCAGGGGCGCTCAGCACGCAGACGTCCACGGCCAG...CAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp AGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGTCATGGGGAAGAGATTaGTGTCCAACGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RPGRGPYASVAGFPAAFRSWGRD*CPTPAW
Trigger: CCAAGCCGGCGTTGGACAGCAATCTCTTCCCCATGA...CCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp AGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAGGCTGGCTTTCCCGCTaGTTTCAGGCTAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RSLARPGGPWIKAIRTEQGWLSR*FQASSR
Trigger: CCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCCAGCC...TTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp ACAAAGCGGGCTAGACGCCACCTTTCCGCCCCCACGCCTTGGCTAAGTGGGGGAGCGTGGGGCCGTTCGTaGAGCGGTGTCTTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: TKRARRHLSAPTPWLSGGAWGRS*SGVLLG
Trigger: GCCTAGCAAGACACCGCTCCACGAACGGCCCCACGC...TCCCCCACTTAGCCAAGGCGTGGGGGCGGAAAGGTGGCGTCTAGCCCGCTTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GTGGGGGAAACAATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCCGCCCCCACGCCTTaGCTAAGTGGGGGACCGCGA +
Preference number: 4 (lower is better)
Translates to: VGETMRCLGRARVGWAPPSAPTP*LSGGPR
Trigger: TCGCGGTCCCCCACTTAGCCAAGGCGTGGGGGCGGA...AGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp ACAAAGCGGGCTAGACGCCACCTTTCCGCCCCCACGCCTTGGCTAAGTGGGGGACATCTCCCAGCGGCTTaGGGACCCGAGGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TKRARRHLSAPTPWLSGGHLPAA*GPEVGK
Trigger: CTTCCCCACCTCGGGTCCCCAAGCCGCTGGGAGATG...TCCCCCACTTAGCCAAGGCGTGGGGGCGGAAAGGTGGCGTCTAGCCCGCTTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR TCA 90 bp TGGCCCCTGACCGCTGGCCGGCGTGAAAGGTTGGGAACCGGGGGCATCGAAGGGAGGGTGGGGAGAAGGTaGGACTGGGTATGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: WPLTAGRRERLGTGGIEGRVGRR*DWVWKG
Trigger: TCCTTTCCATACCCAGTCTCACCTTCTCCCCACCCT...CCCTTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGCCAGCGGTCAGGGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp AATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGGCGGTGGCTGCACCATaGTGGCCGTGGACGTCTGCG +
Preference number: 4 (lower is better)
Translates to: NEVFGSGEGWMGSAFSPLAVAAP*WPWTSA
Trigger: CGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGC...CAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp GGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCAGTCAAGACCATGCTaGAAGCTGTGGCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GWMGSAFSPLQVLGAARRQSRPC*KLWQRA
Trigger: TGCTCTCTGCCACAGCTTGCAGCATGGTCTTGACTG...CCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp GCCGGGGGCTGGCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCCCGAGAGGCGATCCGTaGTGCAGGGGAAAAGCATGC +
Preference number: 4 (lower is better)
Translates to: AGGWLEGAGVREFRVGLLPRGDP*CRGKAC
Trigger: GCATGCTTTTCCCCTGCACCACGGATCGCCTCTCGG...GAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGCCAGCCCCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp TGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTTAGCAAACTGCTCATaGTCACCGGCAGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: WRGQGAAPTPPWLAFPLLLANCS*SPAASR
Trigger: CCGAGAAGCTGCCGGTGACCATGAGCAGTTTGCTAA...AAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp GGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGTGTCCTGGCACCAGTTaGAAGGGGAGTCGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: GRARVGWAPPSVPCRSLACPGTS*KGSRRR
Trigger: TCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACA...CGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp CGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTAATGATGTTGTCCTaGCACCAGTTGGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RPWRGQGAAPTPPWLAFPLMMLS*HQLEGE
Trigger: CTCCCCTTCCAACTGGTGCCAGGACAACATCATTAG...CGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GAAGCAAGGGGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCCTAATGATGTTGTCCTaGCACCAGTTGGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: EARGRTSMERPGRGPYASLMMLS*HQLEGE
Trigger: CTCCCCTTCCAACTGGTGCCAGGACAACATCATTAG...GGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCCCCTTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp CCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTTGGAGCCCATGTCGTTaGGGTGGTGGTAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PCRSLARPGGPWIKAIRTWSPCR*GGGRGC
Trigger: ACAACCTCTACCACCACCCCAACGACATGGGCTCCA...AGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp CCTGGGGGTCGTGGAAAGACACGGGCTCTGAGTAGAGGTCGCCGCAGTTGGAGTGCGTGGGGCCGTTCGTaGAGCGGTGTCTTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: PGGRGKTRALSRGRRSWSAWGRS*SGVLLG
Trigger: GCCTAGCAAGACACCGCTCCACGAACGGCCCCACGC...ACTCCAACTGCGGCGACCTCTACTCAGAGCCCGTGTCTTTCCACGACCCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp GAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGTCCTTTTGCTTGAGGTaGATCTTGGCGTGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: EARARPLRLRGWLSRCFQSFCLR*ILAWRL
Trigger: CAAGCGCCACGCCAAGATCCACCTCAAGCAAAAGGA...CTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp TTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCCGGCGTGAAAGGTTaGGAACCGGGGGCATCGAAG +
Preference number: 4 (lower is better)
Translates to: LGRARVGWAPPSVPCRSLAGVKG*EPGASK
Trigger: CTTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGC...CAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp TGGCTTTCCCGCTGCTTTCAGGCTAGCAGCCGGGAGGCACTGGAGGGGAAAAGTCGGCCCGGCGGCCCCTaGATCAAGGCGATCCGAACT +
Preference number: 4 (lower is better)
Translates to: WLSRCFQASSREALEGKSRPGGP*IKAIRT
Trigger: AGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCG...ACTTTTCCCCTCCAGTGCCTCCCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GGGGGAAACAATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCCGGGCGAGGGTTGGATaGGCTCCGCCTTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GGNNEVFGSGEGWMGSAFRARVG*APPSVP
Trigger: AGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCG...GAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp CGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCTTGGGGACCCGAGGTaGGGAAGAGTTTGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: RARVGWAPPSVPCRSLARLGDPR*GRVWGK
Trigger: TTTACCCCAAACTCTTCCCCACCTCGGGTCCCCAAG...CCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp ACAAAGCGGGCTAGACGCCACCTTTCCGCCCCCACGCCTTGGCTAAGTGGGGGATGCGGACCCCCAGCATaGGACATCTCCCAGCGGCTT +
Preference number: 4 (lower is better)
Translates to: TKRARRHLSAPTPWLSGGCGPPA*DISQRL
Trigger: AAGCCGCTGGGAGATGTCCCATGCTGGGGGTCCGCA...TCCCCCACTTAGCCAAGGCGTGGGGGCGGAAAGGTGGCGTCTAGCCCGCTTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp CCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGCTACCATGCTGCAAGCTGTaGCAGAGAGCAACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PGRGPYASVAGFPAAFRLPCCKL*QRATFP
Trigger: AGGGAAGGTTGCTCTCTGCCACAGCTTGCAGCATGG...TAGCCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR TCA 90 bp GCCCGGGATTGCCCTGGGGGTCGTGGAAAGACACGGGCTCTGAGTAGAGGTCGCGAAAGACACGGGCTCTaGGTAGAGGTCGCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: ARDCPGGRGKTRALSRGRERHGL*VEVAAV
Trigger: AACTGCGGCGACCTCTACTCAGAGCCCGTGTCTTTC...GCGACCTCTACTCAGAGCCCGTGTCTTTCCACGACCCCCAGGGCAATCCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp GGCTGGCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCGTTGGTCTGGCCGTGGACGTCTaGGTGCTGAGCGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: GWLEGAGVREFRVGLLVGLAVDV*VLSAPE
Trigger: TTCAGGGGCGCTCAGCACGCAGACGTCCACGGCCAG...ACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp CCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGGGTTGGGCTTCTCGTTaGTCAGACCGATGTCCATTA +
Preference number: 4 (lower is better)
Translates to: PSVPCRSLARPGGPWIKAGWASR*SDRCPL
Trigger: TAATGGACATCGGTCTGACCAACGAGAAGCCCAACC...CGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp TCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCAAGAGAGTTCCGGGTTaGGCTTCTCGTTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: SVPCRSLARPGGPWIKAIKRVPG*ASRWSD
Trigger: GTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTT...GATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GCCGGGGGCACCCCCAAGATGCCGGCGCTCATGAGGCTAATGATGTTGTCCTGGTTGCCCTGGGGGTCGTaGAAAGACACGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: AGGTPKMPALMRLMMLSWLPWGS*KDTGSE
Trigger: CTCAGAGCCCGTGTCTTTCCACGACCCCCAGGGCAA...CCAGGACAACATCATTAGCCTCATGAGCGCCGGCATCTTGGGGGTGCCCCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp TACATGGCCTCCACGTCACCCTGCGGTGGCTGCACCATGCTGGCCGTGGACGTCTGTCCAACGCCGGCTTaGCCGATTGGTAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: YMASTSPCGGCTMLAVDVCPTPA*PIGNPG
Trigger: CCCAGGATTACCAATCGGCCAAGCCGGCGTTGGACA...GACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGCCATGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp GCCGGGGGCACCCCCAAGATGCCGGCGCTCATGAGGCTAATGATGTTGTCCTGGATGGGGTCCATGCCCTaGAAGGGCTTGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: AGGTPKMPALMRLMMLSWMGSMP*KGLCSG
Trigger: TCCGGAGCACAAGCCCTTCCAGGGCATGGACCCCAT...CCAGGACAACATCATTAGCCTCATGAGCGCCGGCATCTTGGGGGTGCCCCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp ACAAAGCGGGCTAGACGCCACCTTTCCGCCCCCACGCCTTGGCTAAGTGGGGGAATGGGGTCCATGCCCTaGAAGGGCTTGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: TKRARRHLSAPTPWLSGGMGSMP*KGLCSG
Trigger: TCCGGAGCACAAGCCCTTCCAGGGCATGGACCCCAT...TCCCCCACTTAGCCAAGGCGTGGGGGCGGAAAGGTGGCGTCTAGCCCGCTTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp CCCTGCGGTGGCTGCACCATGCTGGCCGTGGACGTCTGCGTGCTGAGCGCCCCTCTGCCAAAGCCCGGGTaGATCTGCTTGTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: PCGGCTMLAVDVCVLSAPLPKPG*ICLSLN
Trigger: ATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAG...AGGGGCGCTCAGCACGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp TGGCTTTCCCGCTGCTTTCAGGCTAGCAGCCGGGAGGCACTGGAGGGGAAAAGTGCGTGGGGCCGTTCGTaGAGCGGTGTCTTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: WLSRCFQASSREALEGKSAWGRS*SGVLLG
Trigger: GCCTAGCAAGACACCGCTCCACGAACGGCCCCACGC...ACTTTTCCCCTCCAGTGCCTCCCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp TGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCTCCTTTTGCTTGAGGTaGATCTTGGCGTGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: WRGPAAPGSRRSELNKAGSFCLR*ILAWRL
Trigger: CAAGCGCCACGCCAAGATCCACCTCAAGCAAAAGGA...GCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp AATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGGGGTCGGGCGAGGGTTaGATGGGCTCCGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: NEVFGSGEGWMGSAFSPLGSGEG*MGSAFS
Trigger: ACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCC...CAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp ACAAAGCGGGCTAGACGCCACCTTTCCGCCCCCACGCCTTGGCTAAGTGGGGGAGCAAGCTCTGCGCTTTaGTGCGCTCCTTACCCCCTC +
Preference number: 4 (lower is better)
Translates to: TKRARRHLSAPTPWLSGGASSAL*CAPYPL
Trigger: GAGGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGC...TCCCCCACTTAGCCAAGGCGTGGGGGCGGAAAGGTGGCGTCTAGCCCGCTTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp AATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGACTCCACGCCGCACATaGCTCCATCCCGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NEVFGSGEGWMGSAFSPLTPRRT*LHPGWE
Trigger: CTCCCACCCGGGATGGAGCCATGTGCGGCGTGGAGT...CAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522910.1
CDS-3UTR TCA 90 bp GGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGACGCGGCCTCAGTATTaGTCTCACAAACAGACACGC +
Preference number: 4 (lower is better)
Translates to: GRARVGWAPPSVPCRSLATRPQY*SHKQTR
Trigger: GCGTGTCTGTTTGTGAGATCAATACTGAGGCCGCGT...CGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR TCA 90 bp GGCTGGCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCGTTGGTTGCCGGAGAAGAGGTTaGGCGCGCTGGGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: GWLEGAGVREFRVGLLVGCRRRG*ARWGSP
Trigger: AGGAGATCCCCAGCGCGCTCAACCTCTTCTCCGGCA...ACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR TCA 90 bp AGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGGAAAGACACGGGCTCTaGGTAGAGGTCGCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: RCLGRARVGWAPPSVPCRERHGL*VEVAAV
Trigger: AACTGCGGCGACCTCTACTCAGAGCCCGTGTCTTTC...CCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR TCA 90 bp GTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCAAGGCGATCCGAACTaGACAAAGCGGGCTAGACGC +
Preference number: 4 (lower is better)
Translates to: VFGSGEGWMGSAFSPLQVQGDPN*TKRARR
Trigger: GCGTCTAGCCCGCTTTGTTCAGTTCGGATCGCCTTG...GACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp TCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCGCCTTCTTCTCCTTTTaGTTGAGGTGGATCTTGGCG +
Preference number: 4 (lower is better)
Translates to: SVPCRSLARPGGPWIKAIAFFSF*LRWILA
Trigger: CGCCAAGATCCACCTCAAGCAAAAGGAGAAGAAGGC...GATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GCCGGGGGCACCCCCAAGATGCCGGCGCTCATGAGGCTAATGATGTTGTCCTGGTGTCCTGGCACCAGTTaGAAGGGGAGTCGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: AGGTPKMPALMRLMMLSWCPGTS*KGSRRR
Trigger: TCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACA...CCAGGACAACATCATTAGCCTCATGAGCGCCGGCATCTTGGGGGTGCCCCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp GCCGGGGGCTGGCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCTGGAGCCCATGTCGTTaGGGTGGTGGTAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AGGWLEGAGVREFRVGLLWSPCR*GGGRGC
Trigger: ACAACCTCTACCACCACCCCAACGACATGGGCTCCA...GAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGCCAGCCCCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp GGCTTTCCCGCTGCTTTCAGGCTAGCAGCCGGGAGGCACTGGAGGGGAAAAGTGCTACGCCTCCGTGGCTaGCTTTCCCGCTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GFPAAFRLAAGRHWRGKVLRLRG*LSRCFQ
Trigger: CTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAG...CACTTTTCCCCTCCAGTGCCTCCCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR TCA 90 bp CTCTCGAGTCTTCGAGGGGGTATAGAGGGAGACGTGGGGGAAACAATGAGGTGTGCTCGTCCGAACGGCTaGAACGGCGGTCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LSSLRGGIEGDVGETMRCARPNG*NGGRSP
Trigger: AGGGCTGCGACCGCCGTTTCAGCCGTTCGGACGAGC...ACACCTCATTGTTTCCCCCACGTCTCCCTCTATACCCCCTCGAAGACTCGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR TCA 90 bp GGCTTTCCCGCTGCTTTCAGGCTAGCAGCCGGGAGGCACTGGAGGGGAAAAGTGCAAGGCGATCCGAACTaGACAAAGCGGGCTAGACGC +
Preference number: 4 (lower is better)
Translates to: GFPAAFRLAAGRHWRGKVQGDPN*TKRARR
Trigger: GCGTCTAGCCCGCTTTGTTCAGTTCGGATCGCCTTG...CACTTTTCCCCTCCAGTGCCTCCCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp AGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCATGGGGAAGAGATTaGTGTCCAACGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RCLGRARVGWAPPSVPCRSWGRD*CPTPAW
Trigger: CCAAGCCGGCGTTGGACAGCAATCTCTTCCCCATGA...CCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp CGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCTGCTTGTCTTTGAATaGCTTGATGGTCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RARVGWAPPSVPCRSLARLLVFE*LDGLQR
Trigger: CCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAG...CCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAAAGAGAGTTCCGGGTTaGGCTTCTCGTTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GPWRGPAAPGSRRSELNKKRVPG*ASRWSD
Trigger: GTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTT...TTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp TGGCTTTCCCGCTGCTTTCAGGCTAGCAGCCGGGAGGCACTGGAGGGGAAAAGTTTGCCCTGGGGGTCGTaGAAAGACACGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: WLSRCFQASSREALEGKSLPWGS*KDTGSE
Trigger: CTCAGAGCCCGTGTCTTTCCACGACCCCCAGGGCAA...ACTTTTCCCCTCCAGTGCCTCCCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GGGGGAAACAATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCTGTCCAACGCCGGCTTaGCCGATTGGTAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: GGNNEVFGSGEGWMGSAFCPTPA*PIGNPG
Trigger: CCCAGGATTACCAATCGGCCAAGCCGGCGTTGGACA...GAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp AGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGTGTAGTCAGGAATCATaGGGAAGAGATTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RPGRGPYASVAGFPAAFRCSQES*GRDCCP
Trigger: TGGACAGCAATCTCTTCCCCATGATTCCTGACTACA...CCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp TTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGTGGAGCCCATGTCGTTaGGGTGGTGGTAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LGRARVGWAPPSVPCRSLWSPCR*GGGRGC
Trigger: ACAACCTCTACCACCACCCCAACGACATGGGCTCCA...CAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp AGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAGACACAAAGCTGGAGTaGCTGGTTGAAGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: RSLARPGGPWIKAIRTEQDTKLE*LVEACL
Trigger: AAGGCAGGCTTCAACCAGCCACTCCAGCTTTGTGTC...TTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp GGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGGAGAAGACACAAAGCTaGAGTGGCTGGTTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GRARVGWAPPSVPCRSLAEKTQS*SGWLKP
Trigger: AGGCTTCAACCAGCCACTCCAGCTTTGTGTCTTCTC...CGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp GTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAAAAAGTCCAAGTACCTaGAAATTCACAACCCCCTGC +
Preference number: 4 (lower is better)
Translates to: VPCRSLARPGGPWIKAIRKSPST*KFTTPC
Trigger: GCAGGGGGTTGTGAATTTCCAGGTACTTGGACTTTT...TCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR TCA 90 bp TGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAGGGGGCCTCAGGCGCAGGTGGTaGCCACGGGGGCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: WICLSLNALMVSRGVIGGLRRRW*PRGPAT
Trigger: TGTCGCTGGCCCCCGTGGTCACCACCTGCGCCTGAG...GCCCCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp CTATCTGTTGTGTTGGTGATGACAAAGGGCAAAAGCAGAGCCAGCTTCCCCATGCGCCGCTGCCGCCGCTaGTACCACCACCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: LSVVLVMTKGKSRASFPMRRCRR*YHHHQP
Trigger: GGGCTGGTGGTGGTGGTAGCAGCGGCGGCAGCGGCG...CATGGGGAAGCTGGCTCTGCTTTTGCCCTTTGTCATCACCAACACAACAGATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp CGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCTAGACGTTGGTTTAGCAAACTaGTCATGGTCACCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RPGGPWIKAIRTEQSGLDVGLAN*SWSPAA
Trigger: AGCTGCCGGTGACCATGAGCAGTTTGCTAAACCAAC...GTCTAGCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp TGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTTCCCAAGTAGGAGGCGAGCCCGGGATTaGCCTGGGGGTCGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: CCPGTSWKGSRRRTFPSRRRARD*PGGRGK
Trigger: CTTTCCACGACCCCCAGGGCAATCCCGGGCTCGCCT...CCTACTTGGGAAAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp GCCGGGGGCTGGCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCAAGCCCGGGTGGATCTaGTTGTCTTTGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: AGGWLEGAGVREFRVGLLKPGWI*LSLNAL
Trigger: CAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTT...GAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGCCAGCCCCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp CGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCTAGACAAGCCCGGGTGGATCTaGTTGTCTTTGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: RPGGPWIKAIRTEQSGLDKPGWI*LSLNAL
Trigger: CAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTT...GTCTAGCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp ATGATGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTTCCCAAGGCTTGCGCTCGTCGCTaGGCGCAAACTTGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: MMLSWHQLEGESKANFPKACARR*AQTCAR
Trigger: GCGGGCGCAAGTTTGCGCGCAGCGACGAGCGCAAGC...CTTGGGAAAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp ACCCCCAAGATGCCGGCGCTCATGAGGCTAATGATGTTGTCCTGGCACCAGTTGCGAGGATGCAGAGGGTaGACCGCCCTTCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: TPKMPALMRLMMLSWHQLRGCRG*TALLRL
Trigger: AAGGCGGAGAAGGGCGGTGCACCCTCTGCATCCTCG...CAACTGGTGCCAGGACAACATCATTAGCCTCATGAGCGCCGGCATCTTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp TGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTAGATTGTCAGGCAGTTaGTTTAGCAAACTGCTCATG +
Preference number: 4 (lower is better)
Translates to: WRGQGAAPTPPWLAFPLLRLSGS*FSKLLM
Trigger: CATGAGCAGTTTGCTAAACCAACTGCCTGACAATCT...AAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp TGGCTTTCCCGCTGCTTTCAGGCTAGCAGCCGGGAGGCACTGGAGGGGAAAAGTGCTTGTGCTCCGGAATaGAGCCCATGTCGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: WLSRCFQASSREALEGKSACAPE*SPCRWG
Trigger: ACCCCAACGACATGGGCTCCATTCCGGAGCACAAGC...ACTTTTCCCCTCCAGTGCCTCCCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp AGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGGTGGGGAAGAGTTTaGGGTAAACACAGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: RSLARPGGPWIKAIRTEQRWGRV*GKHSPV
Trigger: AACTGGGCTGTGTTTACCCCAAACTCTTCCCCACCT...TTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp TGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTTCCCAAGTAGGACTCCACGCCGCACATaGCTCCATCCCGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: CCPGTSWKGSRRRTFPSRTPRRT*LHPGWE
Trigger: CTCCCACCCGGGATGGAGCCATGTGCGGCGTGGAGT...CCTACTTGGGAAAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR CAA 72 bp GGTATAGAGGGAGACGTGGGGGAAACAATGAGGTGTTaGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GIEGDVGETMRC*GRARVGWAPPS
Trigger: TGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCCACGTCTCCCTCTATACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
3UTR CAA 72 bp ACCCCCAAGATGCCGGCGCTCATGAGGCTAATGATGTaGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: TPKMPALMRLMM*SWHQLEGESKA
Trigger: CGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACATCATTAGCCTCATGAGCGCCGGCATCTTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR CAA 72 bp GGCTGGGGCAGGCTGCCAAAGCCCGGGTGGATCTGCTaGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: GWGRLPKPGWIC*SLNALMVSRGV
Trigger: TACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAGCCTGCCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR TCA 90 bp AGGAACAGTACATTCAGTCAAGACCATGCTGCAAGCTGTGGCAGAGAGCAACCTTGGACGTCTGCGTGCTaGGCGCCCCTGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RNSTFSQDHAASCGREQPWTSAC*APLKPG
Trigger: CCCCGGCTTCAGGGGCGCTCAGCACGCAGACGTCCA...AGGTTGCTCTCTGCCACAGCTTGCAGCATGGTCTTGACTGAATGTACTGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR TCA 90 bp TGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAGGGGGCGCTCGTCCGAACGGCTaGAACGGCGGTCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: WICLSLNALMVSRGVIGGARPNG*NGGRSP
Trigger: AGGGCTGCGACCGCCGTTTCAGCCGTTCGGACGAGC...GCCCCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR TCA 90 bp GGCTTTCCCGCTGCTTTCAGGCTAGCAGCCGGGAGGCACTGGAGGGGAAAAGTGTCTTCTCCTTTTGCTTaGGGTGGATCTTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: GFPAAFRLAAGRHWRGKVSSPFA*GGSWRG
Trigger: GCCACGCCAAGATCCACCTCAAGCAAAAGGAGAAGA...CACTTTTCCCCTCCAGTGCCTCCCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR TCA 90 bp AGGAACAGTACATTCAGTCAAGACCATGCTGCAAGCTGTGGCAGAGAGCAACCTCTCAGGCGCAGGTGGTaGCCACGGGGGCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: RNSTFSQDHAASCGREQPLRRRW*PRGPAT
Trigger: TGTCGCTGGCCCCCGTGGTCACCACCTGCGCCTGAG...AGGTTGCTCTCTGCCACAGCTTGCAGCATGGTCTTGACTGAATGTACTGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR TCA 90 bp AGGAACAGTACATTCAGTCAAGACCATGCTGCAAGCTGTGGCAGAGAGCAACCTGACCGCTGGCCGGCGTaGAAGGTTGGGAACCGGGGG +
Preference number: 4 (lower is better)
Translates to: RNSTFSQDHAASCGREQPDRWPA*KVGNRG
Trigger: CCCCCGGTTCCCAACCTTTCACGCCGGCCAGCGGTC...AGGTTGCTCTCTGCCACAGCTTGCAGCATGGTCTTGACTGAATGTACTGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp GGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCTAGACGCCACCTTTAGAGGCGATCCGTGGTaGAGGGGAAAAGCATGCGAG +
Preference number: 4 (lower is better)
Translates to: GPWIKAIRTEQSGLDATFRGDPW*RGKACE
Trigger: CTCGCATGCTTTTCCCCTGCACCACGGATCGCCTCT...AAAGGTGGCGTCTAGCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp GGTGGTAGAGGTTGTAGTCAGGAATCATGGGGAAGAGATTGCTGTCCAACGCCGTCACCCTGCGGTGGCTaGACCATGCTGGCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: GGRGCSQESWGRDCCPTPSPCGG*TMLAVD
Trigger: GTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGA...CGGCGTTGGACAGCAATCTCTTCCCCATGATTCCTGACTACAACCTCTACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp GCCCGGGATTGCCCTGGGGGTCGTGGAAAGACACGGGCTCTGAGTAGAGGTCGCCTGCTTGTCTTTGAATaGCTTGATGGTCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ARDCPGGRGKTRALSRGRLLVFE*LDGLQR
Trigger: CCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAG...GCGACCTCTACTCAGAGCCCGTGTCTTTCCACGACCCCCAGGGCAATCCCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp GTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCAAGCCCGGGTGGATCTaGTTGTCTTTGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: VFGSGEGWMGSAFSPLQVKPGWI*LSLNAL
Trigger: CAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTT...GACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp TTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCCTTCTTCTCCTTTTaGTTGAGGTGGATCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LGRARVGWAPPSVPCRSLAFFSF*LRWILA
Trigger: CGCCAAGATCCACCTCAAGCAAAAGGAGAAGAAGGC...CAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp CTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGTATCATGCAGTGACATaGATATACCAGAAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: LAGPWRGPAAPGSRRSELYHAVT*IYQKER
Trigger: TCGCTCCTTCTGGTATATGCATGTCACTGCATGATA...CAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp TGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTTCCCAAGTAGGCTTGTTGCCGGGGGCTaGCTGGAAGGAGCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: CCPGTSWKGSRRRTFPSRLVAGG*LEGAGV
Trigger: TACTCCGGCTCCTTCCAGCCAGCCCCCGGCAACAAG...CCTACTTGGGAAAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR TCA 90 bp TGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCTCAATTATCATGCAGTaGCATGCATATACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: WRGPAAPGSRRSELNKAGSIIMQ*HAYTRR
Trigger: CCTTCTGGTATATGCATGTCACTGCATGATAATTGA...GCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp GGTGGTAGAGGTTGTAGTCAGGAATCATGGGGAAGAGATTGCTGTCCAACGCCGAGGTCACGGTCTTGTTaGCGGGGGCTGGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGRGCSQESWGRDCCPTPRSRSC*RGLAGR
Trigger: CCTTCCAGCCAGCCCCCGGCAACAAGACCGTGACCT...CGGCGTTGGACAGCAATCTCTTCCCCATGATTCCTGACTACAACCTCTACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp CGTTGGGGTGGTGGTAGAGGTTGTAGTCAGGAATCATGGGGAAGAGATTGCTGTGCCTCCACGTCACCCTaGGGTGGCTGCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: RWGGGRGCSQESWGRDCCASTSP*GGCTML
Trigger: CAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGC...ACAGCAATCTCTTCCCCATGATTCCTGACTACAACCTCTACCACCACCCCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp CGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCTAGACTGGCTGGTTGAAGCCTaGCTTTCTGGGAAAAGATTT +
Preference number: 4 (lower is better)
Translates to: RPGGPWIKAIRTEQSGLDWLVEA*LSGKRF
Trigger: AAATCTTTTCCCAGAAAGGCAGGCTTCAACCAGCCA...GTCTAGCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp TTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCTACTGTATTAGCATTTaGTCACAGTGCAAATGGTAC +
Preference number: 4 (lower is better)
Translates to: LDGLRLQSLAGPWRGPAAYCISI*SQCKWY
Trigger: GTACCATTTGCACTGTGAGCAAATGCTAATACAGTA...GGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp CCTGGGGGTCGTGGAAAGACACGGGCTCTGAGTAGAGGTCGCCGCAGTTGGAGTGGTTGGGCTTCTCGTTaGTCAGACCGATGTCCATTA +
Preference number: 4 (lower is better)
Translates to: PGGRGKTRALSRGRRSWSGWASR*SDRCPL
Trigger: TAATGGACATCGGTCTGACCAACGAGAAGCCCAACC...ACTCCAACTGCGGCGACCTCTACTCAGAGCCCGTGTCTTTCCACGACCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp CCCGGGTGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAGTGGCTGCACCATGCTaGCCGTGGACGTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: PGWICLSLNALMVSRGVIVAAPC*PWTSAC
Trigger: GCACGCAGACGTCCACGGCCAGCATGGTGCAGCCAC...TATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp GAGGCTAATGATGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTAGCCCGGGATTGCCCTaGGGGTCGTGGAAAGACACG +
Preference number: 4 (lower is better)
Translates to: EANDVVLAPVGRGVEGELSPGLP*GSWKDT
Trigger: CGTGTCTTTCCACGACCCCCAGGGCAATCCCGGGCT...AAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACATCATTAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp GGGGGAAACAATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCCTGCCAAAGCCCGGGTaGATCTGCTTGTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: GGNNEVFGSGEGWMGSAFLPKPG*ICLSLN
Trigger: ATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAG...GAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp TTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCTGCTCACAGTGCAAATaGTACAACATTACACCATTT +
Preference number: 4 (lower is better)
Translates to: LDGLRLQSLAGPWRGPAACSQCK*YNITPF
Trigger: AAATGGTGTAATGTTGTACCATTTGCACTGTGAGCA...GGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp GTGGGGGAAACAATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTCTGCTTGTCTTTGAATaGCTTGATGGTCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VGETMRCLGRARVGWAPPLLVFE*LDGLQR
Trigger: CCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAG...AGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp CTATCTGTTGTGTTGGTGATGACAAAGGGCAAAAGCAGAGCCAGCTTCCCCATGCGCTGCGCGCAAACTTaGGCCCGCAGAACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LSVVLVMTKGKSRASFPMRCAQT*ARRTRR
Trigger: CCTGCGAGTTCTGCGGGCGCAAGTTTGCGCGCAGCG...CATGGGGAAGCTGGCTCTGCTTTTGCCCTTTGTCATCACCAACACAACAGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp TGGAGTGGCTGGTTGAAGCCTGCCTTTCTGGGAAAAGATTTTGAAAGAGATGGGCCGCCTTCAGTCCCTTaGAGGTCCTTGGCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: WSGWLKPAFLGKDFERDGPPSVP*RSLARP
Trigger: GGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGG...CCCATCTCTTTCAAAATCTTTTCCCAGAAAGGCAGGCTTCAACCAGCCACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp GGGGGAAACAATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCATTCAGTCAAGACCATaGTGCAAGCTGTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GGNNEVFGSGEGWMGSAFIQSRP*CKLWQR
Trigger: TCTCTGCCACAGCTTGCAGCATGGTCTTGACTGAAT...GAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp TGGCCCCTGACCGCTGGCCGGCGTGAAAGGTTGGGAACCGGGGGCATCGAAGGGAGCATTTGCTCACAGTaGAAATGGTACAACATTACA +
Preference number: 4 (lower is better)
Translates to: WPLTAGRRERLGTGGIEGSICSQ*KWYNIT
Trigger: TGTAATGTTGTACCATTTGCACTGTGAGCAAATGCT...CCCTTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGCCAGCGGTCAGGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp GGTGAGACTGGGTATGGAAAGGAGACACCTCATTCATCCACATGGATTCATGAAAGGGTGAGCGGCGGCTaGGGCAGGCTGCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GETGYGKETPHSSTWIHERVSGG*GRLPKP
Trigger: GGGCTTTGGCAGCCTGCCCCAGCCGCCGCTCACCCT...TTCATGAATCCATGTGGATGAATGAGGTGTCTCCTTTCCATACCCAGTCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR CAA 72 bp CCAAAGCCCGGGTGGATCTGCTTGTCTTTGAATGCCTaGATGGTCTCCAGAGGGGTAATAGGGGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: PKPGWICLSLNA*MVSRGVIGGGL
Trigger: CAACCCGCCCCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
3UTR CAA 72 bp GGCAGGCTGCCAAAGCCCGGGTGGATCTGCTTGTCTTaGAATGCCTTGATGGTCTCCAGAGGGGTAATAGGG +
Preference number: 4 (lower is better)
Translates to: GRLPKPGWICLS*NALMVSRGVIG
Trigger: CCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR TCA 90 bp GCAACCTTCCCTATTACTCCACTTCAAAGGAGCCACCCTGTACGAGAAGGGCTGGAAAGACACGGGCTCTaGGTAGAGGTCGCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: ATFPITPLQRSHPVREGLERHGL*VEVAAV
Trigger: AACTGCGGCGACCTCTACTCAGAGCCCGTGTCTTTC...CAGCCCTTCTCGTACAGGGTGGCTCCTTTGAAGTGGAGTAATAGGGAAGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp TGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAGGGGGCCCCTGGAAGGGCTTGTaGTCCGGAATGGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: WICLSLNALMVSRGVIGGPWKGL*SGMEPM
Trigger: CATGGGCTCCATTCCGGAGCACAAGCCCTTCCAGGG...GCCCCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp GTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCTTCTCTTTATTCCGGTaGACTGCACTGGATAACCAA +
Preference number: 4 (lower is better)
Translates to: VFGSGEGWMGSAFSPLQVFSLFR*TALDNQ
Trigger: TTGGTTATCCAGTGCAGTGCACCGGAATAAAGAGAA...GACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp GCCGGGGGCACCCCCAAGATGCCGGCGCTCATGAGGCTAATGATGTTGTCCTGGAGATTGTCAGGCAGTTaGTTTAGCAAACTGCTCATG +
Preference number: 4 (lower is better)
Translates to: AGGTPKMPALMRLMMLSWRLSGS*FSKLLM
Trigger: CATGAGCAGTTTGCTAAACCAACTGCCTGACAATCT...CCAGGACAACATCATTAGCCTCATGAGCGCCGGCATCTTGGGGGTGCCCCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp GGCTTTCCCGCTGCTTTCAGGCTAGCAGCCGGGAGGCACTGGAGGGGAAAAGTGTGTAGTCAGGAATCATaGGGAAGAGATTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GFPAAFRLAAGRHWRGKVCSQES*GRDCCP
Trigger: TGGACAGCAATCTCTTCCCCATGATTCCTGACTACA...CACTTTTCCCCTCCAGTGCCTCCCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CCA 90 bp GGATGGAAGACCACCTCCTCCAGCCACGTGCGGACCCCCAGCATGGGACATCTCAAATATGGGCCCTCCTaGCAAACTTCATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GWKTTSSSHVRTPSMGHLKYGPS*QTSSSS
Trigger: AGAAGAAGATGAAGTTTGCCAGGAGGGCCCATATTT...GAGATGTCCCATGCTGGGGGTCCGCACGTGGCTGGAGGAGGTGGTCTTCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR TCA 90 bp CTCTCGAGTCTTCGAGGGGGTATAGAGGGAGACGTGGGGGAAACAATGAGGTGTTCTTCTCCTTTTGCTTaGGGTGGATCTTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: LSSLRGGIEGDVGETMRCSSPFA*GGSWRG
Trigger: GCCACGCCAAGATCCACCTCAAGCAAAAGGAGAAGA...ACACCTCATTGTTTCCCCCACGTCTCCCTCTATACCCCCTCGAAGACTCGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR GCA 90 bp TGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAGGGGGCAGAGGCGATCCGTGGTaGAGGGGAAAAGCATGCGAG +
Preference number: 4 (lower is better)
Translates to: WICLSLNALMVSRGVIGGRGDPW*RGKACE
Trigger: CTCGCATGCTTTTCCCCTGCACCACGGATCGCCTCT...GCCCCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp TTCTCTCTCCTTCTACAAAAAGTCCAAGTACCTGGAAATTCACAACCCCCTGCTGCTTGCGCTCGTCGCTaGGCGCAAACTTGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: FSLLLQKVQVPGNSQPPAACARR*AQTCAR
Trigger: GCGGGCGCAAGTTTGCGCGCAGCGACGAGCGCAAGC...AGCAGGGGGTTGTGAATTTCCAGGTACTTGGACTTTTTGTAGAAGGAGAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp CTATCTGTTGTGTTGGTGATGACAAAGGGCAAAAGCAGAGCCAGCTTCCCCATGCTTGGGTGCCTCAGCTaGTGCGGTATGAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LSVVLVMTKGKSRASFPMLGCLS*CGMRLG
Trigger: ACCCAGCCTCATACCGCACCAGCTGAGGCACCCAAG...CATGGGGAAGCTGGCTCTGCTTTTGCCCTTTGTCATCACCAACACAACAGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp CCCGGGTGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAGCTTGTGCTCCGGAATaGAGCCCATGTCGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGWICLSLNALMVSRGVIACAPE*SPCRWG
Trigger: ACCCCAACGACATGGGCTCCATTCCGGAGCACAAGC...TATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp AGGCTGCCAAAGCCCGGGTGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCTCCTTTTGCTTGAGGTaGATCTTGGCGTGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: RLPKPGWICLSLNALMVSSFCLR*ILAWRL
Trigger: CAAGCGCCACGCCAAGATCCACCTCAAGCAAAAGGA...GGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR TCA 90 bp ATGATGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTTCCCAAGTCTTCTCCTTTTGCTTaGGGTGGATCTTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: MMLSWHQLEGESKANFPKSSPFA*GGSWRG
Trigger: GCCACGCCAAGATCCACCTCAAGCAAAAGGAGAAGA...CTTGGGAAAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR TCA 90 bp AGGAACAGTACATTCAGTCAAGACCATGCTGCAAGCTGTGGCAGAGAGCAACCTACGTGGGGGAAACAATaGGGTGTTTGGGTCGGGCGA +
Preference number: 4 (lower is better)
Translates to: RNSTFSQDHAASCGREQPTWGKQ*GVWVGR
Trigger: TCGCCCGACCCAAACACCTCATTGTTTCCCCCACGT...AGGTTGCTCTCTGCCACAGCTTGCAGCATGGTCTTGACTGAATGTACTGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR TCA 90 bp GGATGGAAGACCACCTCCTCCAGCCACGTGCGGACCCCCAGCATGGGACATCTCAAATCCCCATATCTTTaGGGAAATTTTGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: GWKTTSSSHVRTPSMGHLKSPYL*GNFGQR
Trigger: TCTCTGTCCAAAATTTCCTCAAAGATATGGGGATTT...GAGATGTCCCATGCTGGGGGTCCGCACGTGGCTGGAGGAGGTGGTCTTCCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp CTGTATACGCCTACAAATTCTCTTTATTCCGGTGCACTGCACTGGATAACCAAGTCACCCTGCGGTGGCTaGACCATGCTGGCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: LYTPTNSLYSGALHWITKSPCGG*TMLAVD
Trigger: GTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGA...CTTGGTTATCCAGTGCAGTGCACCGGAATAAAGAGAATTTGTAGGCGTATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp CCCGGGTGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATATCATGGGGAAGAGATTaGTGTCCAACGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PGWICLSLNALMVSRGVISWGRD*CPTPAW
Trigger: CCAAGCCGGCGTTGGACAGCAATCTCTTCCCCATGA...TATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR GCA 90 bp TGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTTCCCAAGTAGGGCCTTCTTCTCCTTTTaGTTGAGGTGGATCTTGGCG +
Preference number: 4 (lower is better)
Translates to: CCPGTSWKGSRRRTFPSRAFFSF*LRWILA
Trigger: CGCCAAGATCCACCTCAAGCAAAAGGAGAAGAAGGC...CCTACTTGGGAAAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp TGGAGTGGCTGGTTGAAGCCTGCCTTTCTGGGAAAAGATTTTGAAAGAGATGGGCCGAGAGGCGATCCGTaGTGCAGGGGAAAAGCATGC +
Preference number: 4 (lower is better)
Translates to: WSGWLKPAFLGKDFERDGPRGDP*CRGKAC
Trigger: GCATGCTTTTCCCCTGCACCACGGATCGCCTCTCGG...CCCATCTCTTTCAAAATCTTTTCCCAGAAAGGCAGGCTTCAACCAGCCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp GCAACCTTCCCTATTACTCCACTTCAAAGGAGCCACCCTGTACGAGAAGGGCTGCAAAGCTGGAGTGGCTaGTTGAAGCCTGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: ATFPITPLQRSHPVREGLQSWSG*LKPAFL
Trigger: CAGAAAGGCAGGCTTCAACCAGCCACTCCAGCTTTG...CAGCCCTTCTCGTACAGGGTGGCTCCTTTGAAGTGGAGTAATAGGGAAGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR GCA 90 bp AGGAACAGTACATTCAGTCAAGACCATGCTGCAAGCTGTGGCAGAGAGCAACCTAGGCTCAGCGATGGCTaGTCTTTCTCCCCACAGATC +
Preference number: 4 (lower is better)
Translates to: RNSTFSQDHAASCGREQPRLSDG*SFSPQI
Trigger: GATCTGTGGGGAGAAAGAGCAGCCATCGCTGAGCCT...AGGTTGCTCTCTGCCACAGCTTGCAGCATGGTCTTGACTGAATGTACTGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CCA 90 bp TGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAGGGGGCTTAGCAAACTGCTCATaGTCACCGGCAGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: WICLSLNALMVSRGVIGGLANCS*SPAASR
Trigger: CCGAGAAGCTGCCGGTGACCATGAGCAGTTTGCTAA...GCCCCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp TGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAGGGGGCAAGAGAGTTCCGGGTTaGGCTTCTCGTTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: WICLSLNALMVSRGVIGGKRVPG*ASRWSD
Trigger: GTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTT...GCCCCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp CGTTGGGGTGGTGGTAGAGGTTGTAGTCAGGAATCATGGGGAAGAGATTGCTGTCTAATGATGTTGTCCTaGCACCAGTTGGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RWGGGRGCSQESWGRDCCLMMLS*HQLEGE
Trigger: CTCCCCTTCCAACTGGTGCCAGGACAACATCATTAG...ACAGCAATCTCTTCCCCATGATTCCTGACTACAACCTCTACCACCACCCCAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp GAGGCTAATGATGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTTGTAGTCAGGAATCATaGGGAAGAGATTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: EANDVVLAPVGRGVEGELCSQES*GRDCCP
Trigger: TGGACAGCAATCTCTTCCCCATGATTCCTGACTACA...AAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACATCATTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CCA 90 bp AGGAACAGTACATTCAGTCAAGACCATGCTGCAAGCTGTGGCAGAGAGCAACCTCTGCCAAAGCCCGGGTaGATCTGCTTGTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: RNSTFSQDHAASCGREQPLPKPG*ICLSLN
Trigger: ATTCAAAGACAAGCAGATCCACCCGGGCTTTGGCAG...AGGTTGCTCTCTGCCACAGCTTGCAGCATGGTCTTGACTGAATGTACTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317216.3
3UTR CAA 72 bp GACTTTAAAAACAGACATTCTGTAAACTCCAGACCTTaGTTCCTTCTCTCTGGGCAACTTACTGACCACAGG +
Preference number: 4 (lower is better)
Translates to: DFKNRHSVNSRP*FLLSGQLTDHR
Trigger: CCTGTGGTCAGTAAGTTGCCCAGAGAGAAGGAACAAAGGTCTGGAGTTTACAGAATGTCTGTTTTTAAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS GCA 90 bp ACCGGCAGCTTCTCGGCGAGTTTGCCGGTCATAGCACTCCCGAGCTaGCGCCGCCGCCGCCACCGCCGCCACCGCCGCCGCTCGCTCCTA +
Preference number: 5 (lower is better)
Translates to: TGSFSASLPVIALPS*RRRRHRRHRRRSLL
Trigger: TAGGAGCGAGCGGCGGCGGTGGCGGCGGTGGCGGCGGCGGCGGCAGCTCGGGAGTGCTATGACCGGCAAACTCGCCGAGAAGCTGCCGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000519492.1
CDS-3UTR CAA 90 bp AGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGCTAGCCGGGGCCGGATGGGCTaGAGGGTGAGCGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: RARPLRLRGWLSRCFQASRGRMG*RVSGGW
Trigger: CCAGCCGCCGCTCACCCTCAAGCCCATCCGGCCCCG...GCTAGCCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp TGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTTCCGCCCCCACGCCTaGGCTAAGTGGGGGACCGCG +
Preference number: 5 (lower is better)
Translates to: WRGQGAAPTPPWLAFPLLFRPHA*AKWGTA
Trigger: CGCGGTCCCCCACTTAGCCAAGGCGTGGGGGCGGAA...AAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp GCATCGAAGGGGAAGCAAGGGGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCTTCCGCCCCCACGCCTaGGCTAAGTGGGGGACCGCG +
Preference number: 5 (lower is better)
Translates to: ASKGKQGAARPWRGQGAAFRPHA*AKWGTA
Trigger: CGCGGTCCCCCACTTAGCCAAGGCGTGGGGGCGGAA...GGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCCCCTTGCTTCCCCTTCGATGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS CCA 90 bp CCGGTCGGCGGCTGCCCCCACCCGGGAGAACCGAAGCCTCTACCGTaGCGTCGCCAACCTAGCCTTCTCGATCGAGGAGGGCGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PVGGCPHPGEPKPLP*RRQPSLLDRGGREE
Trigger: CTCCTCCCGCCCTCCTCGATCGAGAAGGCTAGGTTGGCGACGCCACGGTAGAGGCTTCGGTTCTCCCGGGTGGGGGCAGCCGCCGACCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524088.1
CDS-3UTR CAA 90 bp GCTAGACGCCACCTTTCCGCCCCCACGCCTTGGCTAAGTGGGGGACCGCGAGGGGGCCGGTTGGGGTACTaGCGGGGCCGGATGGGCTTG +
Preference number: 5 (lower is better)
Translates to: ARRHLSAPTPWLSGGPRGGRLGY*RGRMGL
Trigger: CAAGCCCATCCGGCCCCGCAAGTACCCCAACCGGCC...CCCTCGCGGTCCCCCACTTAGCCAAGGCGTGGGGGCGGAAAGGTGGCGTCTAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp TCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCGGCCGGTTGGGGTACTaGCGGGGCCGGATGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SVPCRSLARPGGPWIKAIGRLGY*RGRMGL
Trigger: CAAGCCCATCCGGCCCCGCAAGTACCCCAACCGGCC...GATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp TTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCATCTTGGCGTGGCGCTaGCGCTCGTCGCTGCGCGCA +
Preference number: 5 (lower is better)
Translates to: LDGLRLQSLAGPWRGPAAILAWR*RSSLRA
Trigger: TGCGCGCAGCGACGAGCGCAAGCGCCACGCCAAGAT...GGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp CCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGTGGGTCGGGCGAGGGTaGGATGGGCTCCGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: PSVPCRSLARPGGPWIKAWVGRG*DGLRLQ
Trigger: CTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCA...CGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp AGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGTGGGTCGGGCGAGGGTaGGATGGGCTCCGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: RPGRGPYASVAGFPAAFRWVGRG*DGLRLQ
Trigger: CTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCA...CCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp ACACGCGAGCACGCACACACTCGCGCGCATCCCCGCACGCAGGCGCGCGTGCGTACATCTCCCAGCGGCTaGGGGACCCGAGGTGGGGAA +
Preference number: 5 (lower is better)
Translates to: TREHAHTRAHPRTQARVRTSPSG*GTRGGE
Trigger: TTCCCCACCTCGGGTCCCCAAGCCGCTGGGAGATGT...ACGCACGCGCGCCTGCGTGCGGGGATGCGCGCGAGTGTGTGCGTGCTCGCGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp GCCGGGGGCACCCCCAAGATGCCGGCGCTCATGAGGCTAATGATGTTGTCCTGGCGGGGCCGGATGGGCTaGAGGGTGAGCGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: AGGTPKMPALMRLMMLSWRGRMG*RVSGGW
Trigger: CCAGCCGCCGCTCACCCTCAAGCCCATCCGGCCCCG...CCAGGACAACATCATTAGCCTCATGAGCGCCGGCATCTTGGGGGTGCCCCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CAA 90 bp GGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGCTGCTTGAGGTGGATCTaGGCGTGGCGCTTGCGCTCG +
Preference number: 5 (lower is better)
Translates to: GQGAAPTPPWLAFPLLSGCLRWI*AWRLRS
Trigger: CGAGCGCAAGCGCCACGCCAAGATCCACCTCAAGCA...GCCTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp TGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTGGCCGGCGTGAAAGGTaGGGAACCGGGGGCATCGAA +
Preference number: 5 (lower is better)
Translates to: WRGQGAAPTPPWLAFPLLGRRER*GTGGIE
Trigger: TTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGCC...AAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp GCTAGACGCCACCTTTCCGCCCCCACGCCTTGGCTAAGTGGGGGACCGCGAGGGTCCGCCTTCAGTCCCTaGCAGGTCCTTGGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: ARRHLSAPTPWLSGGPRGSAFSP*QVLGAA
Trigger: GGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGA...CCCTCGCGGTCCCCCACTTAGCCAAGGCGTGGGGGCGGAAAGGTGGCGTCTAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp CGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCTGCCGGAGAAGAGGTaGAGCGCGCTGGGGATCTCC +
Preference number: 5 (lower is better)
Translates to: RARVGWAPPSVPCRSLARLPEKR*SALGIS
Trigger: GGAGATCCCCAGCGCGCTCAACCTCTTCTCCGGCAG...CCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp AGCACGCACACACTCGCGCGCATCCCCGCACGCAGGCGCGCGTGCGTGCGGCGGGGGTTGGGCTTCTCGTaGGTCAGACCGATGTCCATT +
Preference number: 5 (lower is better)
Translates to: STHTLARIPARRRACVRRGLGFS*VRPMSI
Trigger: AATGGACATCGGTCTGACCAACGAGAAGCCCAACCC...CCGCCGCACGCACGCGCGCCTGCGTGCGGGGATGCGCGCGAGTGTGTGCGTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp CGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGTCGCTGCGCGCAAACTaGCGCCCGCAGAACTCGCAG +
Preference number: 5 (lower is better)
Translates to: RARVGWAPPSVPCRSLARSLRAN*RPQNSQ
Trigger: CTGCGAGTTCTGCGGGCGCAAGTTTGCGCGCAGCGA...CCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp CTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGTCGCTGCGCGCAAACTaGCGCCCGCAGAACTCGCAG +
Preference number: 5 (lower is better)
Translates to: LAGPWRGPAAPGSRRSELSLRAN*RPQNSQ
Trigger: CTGCGAGTTCTGCGGGCGCAAGTTTGCGCGCAGCGA...CAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp TTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCTGCTTGAGGTGGATCTaGGCGTGGCGCTTGCGCTCG +
Preference number: 5 (lower is better)
Translates to: LDGLRLQSLAGPWRGPAACLRWI*AWRLRS
Trigger: CGAGCGCAAGCGCCACGCCAAGATCCACCTCAAGCA...GGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp ACACGCGAGCACGCACACACTCGCGCGCATCCCCGCACGCAGGCGCGCGTGCGTAGCAAGCTCTGCGCTTaGGTGCGCTCCTTACCCCCT +
Preference number: 5 (lower is better)
Translates to: TREHAHTRAHPRTQARVRSKLCA*VRSLPP
Trigger: AGGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGCT...ACGCACGCGCGCCTGCGTGCGGGGATGCGCGCGAGTGTGTGCGTGCTCGCGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp GCTAGACGCCACCTTTCCGCCCCCACGCCTTGGCTAAGTGGGGGACCGCGAGGGCAGGGGGTAATCCTCTaGGGTGCCTCAGCTGGTGCG +
Preference number: 5 (lower is better)
Translates to: ARRHLSAPTPWLSGGPRGQGVIL*GASAGA
Trigger: CGCACCAGCTGAGGCACCCAAGAGGATTACCCCCTG...CCCTCGCGGTCCCCCACTTAGCCAAGGCGTGGGGGCGGAAAGGTGGCGTCTAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp GGCCTCCACGTCACCCTGCGGTGGCTGCACCATGCTGGCCGTGGACGTCTGCGTATGCCCTGGAAGGGCTaGTGCTCCGGAATGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GLHVTLRWLHHAGRGRLRMPWKG*CSGMEP
Trigger: GGGCTCCATTCCGGAGCACAAGCCCTTCCAGGGCAT...ACGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CAA 90 bp TCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCATGCCCTGGAAGGGCTaGTGCTCCGGAATGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SVPCRSLARPGGPWIKAIMPWKG*CSGMEP
Trigger: GGGCTCCATTCCGGAGCACAAGCCCTTCCAGGGCAT...GATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp GCCCGGGATTGCCCTGGGGGTCGTGGAAAGACACGGGCTCTGAGTAGAGGTCGCCTGCCGGAGAAGAGGTaGAGCGCGCTGGGGATCTCC +
Preference number: 5 (lower is better)
Translates to: ARDCPGGRGKTRALSRGRLPEKR*SALGIS
Trigger: GGAGATCCCCAGCGCGCTCAACCTCTTCTCCGGCAG...GCGACCTCTACTCAGAGCCCGTGTCTTTCCACGACCCCCAGGGCAATCCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CAA 90 bp GGATGGAAGACCACCTCCTCCAGCCACGTGCGGACCCCCAGCATGGGACATCTCATCTTGGCGTGGCGCTaGCGCTCGTCGCTGCGCGCA +
Preference number: 5 (lower is better)
Translates to: GWKTTSSSHVRTPSMGHLILAWR*RSSLRA
Trigger: TGCGCGCAGCGACGAGCGCAAGCGCCACGCCAAGAT...GAGATGTCCCATGCTGGGGGTCCGCACGTGGCTGGAGGAGGTGGTCTTCCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp AGCACGCACACACTCGCGCGCATCCCCGCACGCAGGCGCGCGTGCGTGCGGCGGATGAGGCTAATGATGTaGTCCTGGCACCAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: STHTLARIPARRRACVRRMRLMM*SWHQLE
Trigger: TTCCAACTGGTGCCAGGACAACATCATTAGCCTCAT...CCGCCGCACGCACGCGCGCCTGCGTGCGGGGATGCGCGCGAGTGTGTGCGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp CCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCATGGGGAAGAGATaGCTGTCCAACGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: PSVPCRSLARPGGPWIKAIMGKR*LSNAGL
Trigger: CAAGCCGGCGTTGGACAGCAATCTCTTCCCCATGAT...CGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp GGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGTAATAGGGGGCGGGTaGACCCGGATGGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: GPWRGPAAPGSRRSELNKVIGGG*TRMGSM
Trigger: CATGGACCCCATCCGGGTCAACCCGCCCCCTATTAC...TTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp GGCTTTCCCGCTGCTTTCAGGCTAGCAGCCGGGAGGCACTGGAGGGGAAAAGTGTCCGCCTTCAGTCCCTaGCAGGTCCTTGGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: GFPAAFRLAAGRHWRGKVSAFSP*QVLGAA
Trigger: GGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGA...CACTTTTCCCCTCCAGTGCCTCCCGGCTGCTAGCCTGAAAGCAGCGGGAAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp GTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAGAAACAATGAGGTGTTaGGGTCGGGCGAGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: VPCRSLARPGGPWIKAIRETMRC*GRARVG
Trigger: TCCAACCCTCGCCCGACCCAAACACCTCATTGTTTC...TCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp GCATCGAAGGGGAAGCAAGGGGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCGACGCGGCCTCAGTATaGATCTCACAAACAGACACG +
Preference number: 5 (lower is better)
Translates to: ASKGKQGAARPWRGQGAADAASV*ISQTDT
Trigger: CGTGTCTGTTTGTGAGATCAATACTGAGGCCGCGTC...GGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCCCCTTGCTTCCCCTTCGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp ACAAAGCGGGCTAGACGCCACCTTTCCGCCCCCACGCCTTGGCTAAGTGGGGGAATGCCCTGGAAGGGCTaGTGCTCCGGAATGGAGCCC +
Preference number: 5 (lower is better)
Translates to: TKRARRHLSAPTPWLSGGMPWKG*CSGMEP
Trigger: GGGCTCCATTCCGGAGCACAAGCCCTTCCAGGGCAT...TCCCCCACTTAGCCAAGGCGTGGGGGCGGAAAGGTGGCGTCTAGCCCGCTTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp TGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTCCCGGGTGGATCTGCTaGTCTTTGAATGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: WRGQGAAPTPPWLAFPLLPGWIC*SLNALM
Trigger: CATCAAGGCATTCAAAGACAAGCAGATCCACCCGGG...AAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp GGGGGAAACAATGAGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCGGCCGGCGTGAAAGGTaGGGAACCGGGGGCATCGAA +
Preference number: 5 (lower is better)
Translates to: GGNNEVFGSGEGWMGSAFGRRER*GTGGIE
Trigger: TTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGCC...GAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCTCATTGTTTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp TGGCCCCTGACCGCTGGCCGGCGTGAAAGGTTGGGAACCGGGGGCATCGAAGGGGAAACAATGAGGTGTTaGGGTCGGGCGAGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: WPLTAGRRERLGTGGIEGETMRC*GRARVG
Trigger: TCCAACCCTCGCCCGACCCAAACACCTCATTGTTTC...CCCTTCGATGCCCCCGGTTCCCAACCTTTCACGCCGGCCAGCGGTCAGGGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp TGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCTCCTCGGGGTACAGATaGTCAGGCAGTTGGTTTAGC +
Preference number: 5 (lower is better)
Translates to: WRGPAAPGSRRSELNKAGSSGYR*SGSWFS
Trigger: GCTAAACCAACTGCCTGACAATCTGTACCCCGAGGA...GCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp GAAGCAAGGGGCCGCACGTCCATGGAGAGGCCAGGGCGCGGCCCCTACGCCTCCTTGTCTTTGAATGCCTaGATGGTCTCCAGAGGGGTA +
Preference number: 5 (lower is better)
Translates to: EARGRTSMERPGRGPYASLSLNA*MVSRGV
Trigger: TACCCCTCTGGAGACCATCAAGGCATTCAAAGACAA...GGAGGCGTAGGGGCCGCGCCCTGGCCTCTCCATGGACGTGCGGCCCCTTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp GTAGCGCGGGATACATGGCCTCCACGTCACCCTGCGGTGGCTGCACCATGCTGGATCATGGGGAAGAGATaGCTGTCCAACGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: VARDTWPPRHPAVAAPCWIMGKR*LSNAGL
Trigger: CAAGCCGGCGTTGGACAGCAATCTCTTCCCCATGAT...CCAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGCCATGTATCCCGCGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CAA 90 bp GGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAATCATGGGGAAGAGATaGCTGTCCAACGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: GPWRGPAAPGSRRSELNKIMGKR*LSNAGL
Trigger: CAAGCCGGCGTTGGACAGCAATCTCTTCCCCATGAT...TTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp CCCTGCGGTGGCTGCACCATGCTGGCCGTGGACGTCTGCGTGCTGAGCGCCCCTTTGTCTTTGAATGCCTaGATGGTCTCCAGAGGGGTA +
Preference number: 5 (lower is better)
Translates to: PCGGCTMLAVDVCVLSAPLSLNA*MVSRGV
Trigger: TACCCCTCTGGAGACCATCAAGGCATTCAAAGACAA...AGGGGCGCTCAGCACGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CAA 90 bp GGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGTTGTCTTTGAATGCCTaGATGGTCTCCAGAGGGGTA +
Preference number: 5 (lower is better)
Translates to: GWMGSAFSPLQVLGAARRLSLNA*MVSRGV
Trigger: TACCCCTCTGGAGACCATCAAGGCATTCAAAGACAA...CCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp CCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGTGGATCTGCTTGTCTTaGAATGCCTTGATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PSVPCRSLARPGGPWIKAWICLS*NALMVS
Trigger: GGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA...CGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp GGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCCCGGGTGGATCTGCTaGTCTTTGAATGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: GRARVGWAPPSVPCRSLAPGWIC*SLNALM
Trigger: CATCAAGGCATTCAAAGACAAGCAGATCCACCCGGG...CGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp GGCTGGCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCGTTGGTTGCTTGAGGTGGATCTaGGCGTGGCGCTTGCGCTCG +
Preference number: 5 (lower is better)
Translates to: GWLEGAGVREFRVGLLVGCLRWI*AWRLRS
Trigger: CGAGCGCAAGCGCCACGCCAAGATCCACCTCAAGCA...ACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CAA 90 bp GAGGCCAGGGCGCGGCCCCTACGCCTCCGTGGCTGGCTTTCCCGCTGCTTTCAGGTAAACTCCAGACCTTaGTTCCTTCTCTCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: EARARPLRLRGWLSRCFQVNSRP*FLLSGQ
Trigger: TTGCCCAGAGAGAAGGAACAAAGGTCTGGAGTTTAC...CTGAAAGCAGCGGGAAAGCCAGCCACGGAGGCGTAGGGGCCGCGCCCTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS CCA 90 bp TGCCGGGGGCTGGCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTaGGCTTCTCGTTGGTCAGACCGATGTCCATTACATTCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: CRGLAGRSRSKRVPG*ASRWSDRCPLHSPG
Trigger: GCCGGGAGAATGTAATGGACATCGGTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGCCAGCCCCCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518773.1
CDS-3UTR CAA 90 bp TTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGGGTTGGGCTTCTCGTaGGTCAGACCGATGTCCATT +
Preference number: 5 (lower is better)
Translates to: LGRARVGWAPPSVPCRSLGLGFS*VRPMSI
Trigger: AATGGACATCGGTCTGACCAACGAGAAGCCCAACCC...CAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp TGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAAGCGGGCTGGATCTGCTTGTCTTaGAATGCCTTGATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: WRGPAAPGSRRSELNKAGWICLS*NALMVS
Trigger: GGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA...GCCCGCTTTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp TGGCCTCCACGTCACCCTGCGGTGGCTGCACCATGCTGGCCGTGGACGTCTGCGTGGATCTGCTTGTCTTaGAATGCCTTGATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: WPPRHPAVAAPCWPWTSAWICLS*NALMVS
Trigger: GGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA...CGCAGACGTCCACGGCCAGCATGGTGCAGCCACCGCAGGGTGACGTGGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS CCA 90 bp GCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCGTTaGTCAGACCGATGTCCATTACATTCTCCCGGCCCCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: AGRSRSKRVPGWASR*SDRCPLHSPGPSLL
Trigger: GAGGAGGCTGGGGCCGGGAGAATGTAATGGACATCGGTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518773.1
CDS CCA 90 bp GCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCGTTaGTCAGACCGATGTCCATTACATTCTCTCCCTCCGGTCGGCGGC +
Preference number: 5 (lower is better)
Translates to: AGRSRSKRVPGWASR*SDRCPLHSLPPVGG
Trigger: GCCGCCGACCGGAGGGAGAGAATGTAATGGACATCGGTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524088.1
CDS-3UTR CAA 90 bp CGTTGGGGTGGTGGTAGAGGTTGTAGTCAGGAATCATGGGGAAGAGATTGCTGTGGCCGGTTGGGGTACTaGCGGGGCCGGATGGGCTTG +
Preference number: 5 (lower is better)
Translates to: RWGGGRGCSQESWGRDCCGRLGY*RGRMGL
Trigger: CAAGCCCATCCGGCCCCGCAAGTACCCCAACCGGCC...ACAGCAATCTCTTCCCCATGATTCCTGACTACAACCTCTACCACCACCCCAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CAA 90 bp TGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTTCCCAAGTAGGTCGCTGCGCGCAAACTaGCGCCCGCAGAACTCGCAG +
Preference number: 5 (lower is better)
Translates to: CCPGTSWKGSRRRTFPSRSLRAN*RPQNSQ
Trigger: CTGCGAGTTCTGCGGGCGCAAGTTTGCGCGCAGCGA...CCTACTTGGGAAAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS CCA 90 bp GCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCGTTaGTCAGACCGATGTCCATTACATTCTCTCTCCCACCGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: AGRSRSKRVPGWASR*SDRCPLHSLSHRGD
Trigger: GTCCCCGCGGTGGGAGAGAGAATGTAATGGACATCGGTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519492.1
ENST00000522910.1
CDS CCA 90 bp TGCCGGGGGCTGGCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTaGGCTTCTCGTTGGTCAGACCGATGTCCATTACATTCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: CRGLAGRSRSKRVPG*ASRWSDRCPLHSLS
Trigger: GGAGAGAGAATGTAATGGACATCGGTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGCCAGCCCCCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519492.1
ENST00000522910.1
CDS CCA 90 bp TGCCGGGGGCTGGCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTaGGCTTCTCGTTGGTCAGACCGATGTCCATTACATTCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: CRGLAGRSRSKRVPG*ASRWSDRCPLHSLP
Trigger: AGGGAGAGAATGTAATGGACATCGGTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGCCAGCCCCCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524088.1
CDS-3UTR CAA 90 bp CCCGGGTGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAATCTTGGCGTGGCGCTaGCGCTCGTCGCTGCGCGCA +
Preference number: 5 (lower is better)
Translates to: PGWICLSLNALMVSRGVIILAWR*RSSLRA
Trigger: TGCGCGCAGCGACGAGCGCAAGCGCCACGCCAAGAT...TATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CAA 90 bp ACACGCGAGCACGCACACACTCGCGCGCATCCCCGCACGCAGGCGCGCGTGCGTATTCCTCCTTCTAGCTaGGAAGTGACCAAAATTTTT +
Preference number: 5 (lower is better)
Translates to: TREHAHTRAHPRTQARVRIPPSS*EVTKIF
Trigger: AAAAATTTTGGTCACTTCCAAGCTAGAAGGAGGAAT...ACGCACGCGCGCCTGCGTGCGGGGATGCGCGCGAGTGTGTGCGTGCTCGCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp AGGTGTTTGGGTCGGGCGAGGGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGATGAGGCTAATGATGTaGTCCTGGCACCAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: RCLGRARVGWAPPSVPCRMRLMM*SWHQLE
Trigger: TTCCAACTGGTGCCAGGACAACATCATTAGCCTCAT...CCTGCAAGGGACTGAAGGCGGAGCCCATCCAACCCTCGCCCGACCCAAACACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000522910.1
CDS-3UTR CAA 90 bp GCAACCTTCCCTATTACTCCACTTCAAAGGAGCCACCCTGTACGAGAAGGGCTGGTAATAGGGGGCGGGTaGACCCGGATGGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: ATFPITPLQRSHPVREGLVIGGG*TRMGSM
Trigger: CATGGACCCCATCCGGGTCAACCCGCCCCCTATTAC...CAGCCCTTCTCGTACAGGGTGGCTCCTTTGAAGTGGAGTAATAGGGAAGGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp GAGGCTAATGATGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTGTAATAGGGGGCGGGTaGACCCGGATGGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: EANDVVLAPVGRGVEGELVIGGG*TRMGSM
Trigger: CATGGACCCCATCCGGGTCAACCCGCCCCCTATTAC...AAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACATCATTAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CAA 90 bp TTCTCTCTCCTTCTACAAAAAGTCCAAGTACCTGGAAATTCACAACCCCCTGCTCGGGGCCGGATGGGCTaGAGGGTGAGCGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: FSLLLQKVQVPGNSQPPARGRMG*RVSGGW
Trigger: CCAGCCGCCGCTCACCCTCAAGCCCATCCGGCCCCG...AGCAGGGGGTTGTGAATTTCCAGGTACTTGGACTTTTTGTAGAAGGAGAGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp GGTTGGATGGGCTCCGCCTTCAGTCCCTTGCAGGTCCTTGGCGCGGCCCGGCGGGGAGCAAATGAAATGTaGGTGAAGAATTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: GWMGSAFSPLQVLGAARRGANEM*VKNFTF
Trigger: AAAGGTGAAATTCTTCACCAACATTTCATTTGCTCC...CCGCCGGGCCGCGCCAAGGACCTGCAAGGGACTGAAGGCGGAGCCCATCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS TCA 90 bp TCTGATTGTAATGGACTACCGAGTCGCTGCTGCCGGAGAAGAGGTTaGGCGCGCTGGGGATCTCCTCGGGGTACAGATTGTCAGGCAGTT +
Preference number: 5 (lower is better)
Translates to: SDCNGLPSRCCRRRG*ARWGSPRGTDCQAV
Trigger: AACTGCCTGACAATCTGTACCCCGAGGAGATCCCCAGCGCGCTCAACCTCTTCTCCGGCAGCAGCGACTCGGTAGTCCATTACAATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000519492.1
CDS-3UTR CAA 90 bp TGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAGGGGGCAGCTTCTCGGCGAGTTaGCCGGTCATAGCACTCCCG +
Preference number: 5 (lower is better)
Translates to: WICLSLNALMVSRGVIGGSFSAS*PVIALP
Trigger: CGGGAGTGCTATGACCGGCAAACTCGCCGAGAAGCT...GCCCCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CAA 90 bp TGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTTCCCAAGTAGGGGGTTGGGCTTCTCGTaGGTCAGACCGATGTCCATT +
Preference number: 5 (lower is better)
Translates to: CCPGTSWKGSRRRTFPSRGLGFS*VRPMSI
Trigger: AATGGACATCGGTCTGACCAACGAGAAGCCCAACCC...CCTACTTGGGAAAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CAA 90 bp AGGTCCTTGGCGCGGCCCGGCGGCCCCTGGATCAAGGCGATCCGAACTGAACAAATTCTATCTGTTGTGTaGGTGATGACAAAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: RSLARPGGPWIKAIRTEQILSVV*VMTKGK
Trigger: TTTGCCCTTTGTCATCACCAACACAACAGATAGAAT...TTGTTCAGTTCGGATCGCCTTGATCCAGGGGCCGCCGGGCCGCGCCAAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp TGTTGTCCTGGCACCAGTTGGAAGGGGAGTCGAAGGCGAACTTTCCCAAGTAGGCCCGGGTGGATCTGCTaGTCTTTGAATGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: CCPGTSWKGSRRRTFPSRPGWIC*SLNALM
Trigger: CATCAAGGCATTCAAAGACAAGCAGATCCACCCGGG...CCTACTTGGGAAAGTTCGCCTTCGACTCCCCTTCCAACTGGTGCCAGGACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS-3UTR CAA 90 bp TTCTCTCTCCTTCTACAAAAAGTCCAAGTACCTGGAAATTCACAACCCCCTGCTAGCTTCTCGGCGAGTTaGCCGGTCATAGCACTCCCG +
Preference number: 5 (lower is better)
Translates to: FSLLLQKVQVPGNSQPPASFSAS*PVIALP
Trigger: CGGGAGTGCTATGACCGGCAAACTCGCCGAGAAGCT...AGCAGGGGGTTGTGAATTTCCAGGTACTTGGACTTTTTGTAGAAGGAGAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317216.3
CDS-3UTR CAA 90 bp TGGATCTGCTTGTCTTTGAATGCCTTGATGGTCTCCAGAGGGGTAATAGGGGGCATGAGGCTAATGATGTaGTCCTGGCACCAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: WICLSLNALMVSRGVIGGMRLMM*SWHQLE
Trigger: TTCCAACTGGTGCCAGGACAACATCATTAGCCTCAT...GCCCCCTATTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519492.1
CDS GCA 72 bp TTCTCGGCGAGTTTGCCGGTCATAGCACTCCCGAGCTaGCGCCGCCGCCGCCACCGCCGCCACCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: FSASLPVIALPS*RRRRHRRHRRR
Trigger: GCGGCGGCGGTGGCGGCGGTGGCGGCGGCGGCGGCAGCTCGGGAGTGCTATGACCGGCAAACTCGCCGAGAA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000519492.1
CDS CCA 72 bp GGCTGCCCCCACCCGGGAGAACCGAAGCCTCTACCGTaGCGTCGCCAACCTAGCCTTCTCGATCGAGGAGGG +
Preference number: 6 (lower is better)
Translates to: GCPHPGEPKPLP*RRQPSLLDRGG
Trigger: CCCTCCTCGATCGAGAAGGCTAGGTTGGCGACGCCACGGTAGAGGCTTCGGTTCTCCCGGGTGGGGGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524088.1
CDS CCA 72 bp ATTCTCTCTCCCACCGCGGGGACTCCACGCCGCACATaGCTCCATCCCGGGTGGGAGGCTGAGGGAGTAAGG +
Preference number: 6 (lower is better)
Translates to: ILSPTAGTPRRT*LHPGWEAEGVR
Trigger: CCTTACTCCCTCAGCCTCCCACCCGGGATGGAGCCATGTGCGGCGTGGAGTCCCCGCGGTGGGAGAGAGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522910.1
CDS GCA 72 bp CGATGTCCATTACATTCTCTCCCTCCGGTCGGCGGCTaGCCCCACCCGGGAGAACCGAAGCCTCTACCGTGG +
Preference number: 6 (lower is better)
Translates to: RCPLHSLPPVGG*PHPGEPKPLPW
Trigger: CCACGGTAGAGGCTTCGGTTCTCCCGGGTGGGGGCAGCCGCCGACCGGAGGGAGAGAATGTAATGGACATCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524088.1
CDS CAA 72 bp AAACTGCTCATGGTCACCGGCAGCTTCTCGGCGAGTTaGCCGGTCATAGCACTCCCGAGCTGCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: KLLMVTGSFSAS*PVIALPSCRRR
Trigger: GCGGCGGCGGCAGCTCGGGAGTGCTATGACCGGCAAACTCGCCGAGAAGCTGCCGGTGACCATGAGCAGTTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000519492.1
CDS CCA 72 bp CAGCTTCCAGGCAAGCGGCATCCGAGAGGCGATCCGTaGTGCAGGGGAAAAGCATGCGAGAGGGAAAGTTCG +
Preference number: 6 (lower is better)
Translates to: QLPGKRHPRGDP*CRGKACERESS
Trigger: CGAACTTTCCCTCTCGCATGCTTTTCCCCTGCACCACGGATCGCCTCTCGGATGCCGCTTGCCTGGAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000519492.1
CDS TCA 72 bp AATGGACTACCGAGTCGCTGCTGCCGGAGAAGAGGTTaGGCGCGCTGGGGATCTCCTCGGGGTACAGATTGT +
Preference number: 6 (lower is better)
Translates to: NGLPSRCCRRRG*ARWGSPRGTDC
Trigger: ACAATCTGTACCCCGAGGAGATCCCCAGCGCGCTCAACCTCTTCTCCGGCAGCAGCGACTCGGTAGTCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000519492.1
CDS CAA 90 bp CCGGAGAAGAGGTTGAGCGCGCTGGGGATCTCCTCGGGGTACAGATaGTCAGGCAGTTGGTTTAGCAAACTGCTCATGGTCACCGGCAGC +
Preference number: 6 (lower is better)
Translates to: PEKRLSALGISSGYR*SGSWFSKLLMVTGS
Trigger: GCTGCCGGTGACCATGAGCAGTTTGCTAAACCAACTGCCTGACAATCTGTACCCCGAGGAGATCCCCAGCGCGCTCAACCTCTTCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000519492.1
CDS CCA 72 bp AGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCGTTaGTCAGACCGATGTCCATTACATTCTCCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: SRSKRVPGWASR*SDRCPLHSPGP
Trigger: GGGGCCGGGAGAATGTAATGGACATCGGTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518773.1
CDS GCA 72 bp CGGGGTACAGATTGTCAGGCAGTTGGTTTAGCAAACTaGTCATGGTCACCGGCAGCTTCTCGGCGAGTTTGC +
Preference number: 6 (lower is better)
Translates to: RGTDCQAVGLAN*SWSPAASRRVC
Trigger: GCAAACTCGCCGAGAAGCTGCCGGTGACCATGAGCAGTTTGCTAAACCAACTGCCTGACAATCTGTACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000519492.1
CDS CCA 72 bp CTGGCTGGAAGGAGCCGGAGTAAGAGAGTTCCGGGTTaGGCTTCTCGTTGGTCAGACCGATGTCCATTACAT +
Preference number: 6 (lower is better)
Translates to: LAGRSRSKRVPG*ASRWSDRCPLH
Trigger: ATGTAATGGACATCGGTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCTCCTTCCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317216.3
ENST00000518773.1
ENST00000519492.1
ENST00000522910.1
ENST00000524088.1
CDS CCA 72 bp AGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCGTTaGTCAGACCGATGTCCATTACATTCTCTCCCTCCG +
Preference number: 6 (lower is better)
Translates to: SRSKRVPGWASR*SDRCPLHSLPP
Trigger: CGGAGGGAGAGAATGTAATGGACATCGGTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524088.1
CDS CAA 72 bp AGGTTGAGCGCGCTGGGGATCTCCTCGGGGTACAGATaGTCAGGCAGTTGGTTTAGCAAACTGCTCATGGTC +
Preference number: 6 (lower is better)
Translates to: RLSALGISSGYR*SGSWFSKLLMV
Trigger: GACCATGAGCAGTTTGCTAAACCAACTGCCTGACAATCTGTACCCCGAGGAGATCCCCAGCGCGCTCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000519492.1
CDS CCA 72 bp ACAGATTGTCAGGCAGTTGGTTTAGCAAACTGCTCATaGTCACCGGCAGCTTCTCGGCGAGTTTGCCGGTCA +
Preference number: 6 (lower is better)
Translates to: TDCQAVGLANCS*SPAASRRVCRS
Trigger: TGACCGGCAAACTCGCCGAGAAGCTGCCGGTGACCATGAGCAGTTTGCTAAACCAACTGCCTGACAATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317216.3
ENST00000519492.1
CDS CCA 72 bp AGCCGGAGTAAGAGAGTTCCGGGTTGGGCTTCTCGTTaGTCAGACCGATGTCCATTACATTCTCTCTCCCAC +
Preference number: 6 (lower is better)
Translates to: SRSKRVPGWASR*SDRCPLHSLSH
Trigger: GTGGGAGAGAGAATGTAATGGACATCGGTCTGACCAACGAGAAGCCCAACCCGGAACTCTCTTACTCCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519492.1
ENST00000522910.1